Miyakogusa Predicted Gene

Lj5g3v2289000.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2289000.1 Non Chatacterized Hit- tr|F6HVQ1|F6HVQ1_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,73.63,0,no
description,NIF system FeS cluster assembly, NifU-like scaffold,
N-terminal; Q5WMY1_ORYSA_Q5WMY1;,CUFF.57207.1
         (272 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G20970.1 | Symbols: NFU4, ATNFU2 | NFU domain protein 4 | chr...   363   e-101
AT1G51390.1 | Symbols: NFU5, ATNFU1 | NFU domain protein 5 | chr...   348   2e-96
AT3G20970.2 | Symbols: NFU4, ATNFU2 | NFU domain protein 4 | chr...   263   6e-71
AT5G49940.2 | Symbols: NFU2, ATCNFU2 | NIFU-like protein 2 | chr...    65   4e-11
AT5G49940.1 | Symbols: NFU2, ATCNFU2 | NIFU-like protein 2 | chr...    65   5e-11
AT4G25910.1 | Symbols: NFU3, ATCNFU3 | NFU domain protein 3 | ch...    64   8e-11
AT4G01940.1 | Symbols: NFU1, AtCNFU1 | NFU domain protein 1 | ch...    50   2e-06

>AT3G20970.1 | Symbols: NFU4, ATNFU2 | NFU domain protein 4 |
           chr3:7348277-7350069 FORWARD LENGTH=283
          Length = 283

 Score =  363 bits (933), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 172/206 (83%), Positives = 188/206 (91%)

Query: 66  GQRRTMFIQTQSTPNPLSLMFHPGKPVMEVGSADFPNPRSAMNSPLAKSLFAIDGITRIF 125
           GQRRTMFIQTQSTPNP SLMF+PGKPVMEVGSADFPN RSA+ SPLAKS+++IDG+ R+F
Sbjct: 75  GQRRTMFIQTQSTPNPSSLMFYPGKPVMEVGSADFPNVRSALGSPLAKSIYSIDGVVRVF 134

Query: 126 FGSDFVTVTKSEDASWEFLKPEIFAAIMDFYSSGQPLFLDSQTSAAMDTAIKDDDSEIVA 185
           FGSDFVTVTKS+D SW+ LKPEIFAA+MDFYSSGQPLFLDSQ +AA DTAI +DDSE VA
Sbjct: 135 FGSDFVTVTKSDDVSWDILKPEIFAAVMDFYSSGQPLFLDSQAAAAKDTAISEDDSETVA 194

Query: 186 MIKELLETRIRPAVQDDGGDIVYRGFDPDTGIVKLQMQGACSGCPSSSVTLKSGIENMLM 245
           MIKELLETRIRPAVQDDGGDI Y GFDP++GIVKL+MQGACSGCPSSSVTLKSGIENMLM
Sbjct: 195 MIKELLETRIRPAVQDDGGDIEYCGFDPESGIVKLRMQGACSGCPSSSVTLKSGIENMLM 254

Query: 246 HYVPEVKGVEQELDPEGEEAALSGQM 271
           HYV EVKGVEQE D E EE  LSG+M
Sbjct: 255 HYVSEVKGVEQEFDGEDEEGTLSGEM 280


>AT1G51390.1 | Symbols: NFU5, ATNFU1 | NFU domain protein 5 |
           chr1:19050427-19051753 FORWARD LENGTH=275
          Length = 275

 Score =  348 bits (893), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 167/206 (81%), Positives = 184/206 (89%), Gaps = 1/206 (0%)

Query: 67  QRRTMFIQTQSTPNPLSLMFHPGKPVMEVGSADFPNPRSAMNSPLAKSLFAIDGITRIFF 126
           QRRTMFIQTQSTPNP SLMF PGKPVME+GSADFPN RSAM+SPLAK++FAIDG+ R+F+
Sbjct: 71  QRRTMFIQTQSTPNPSSLMFSPGKPVMEIGSADFPNSRSAMSSPLAKAIFAIDGVVRVFY 130

Query: 127 GSDFVTVTKSEDASWEFLKPEIFAAIMDFYSSGQPLFLDSQTSAAMDTAIKDDDSEIVAM 186
           GSDFVTVTKS+D +W+ LKP+IFA +MDFYSSGQPLFLDSQ +AA DTAI +DDSE VAM
Sbjct: 131 GSDFVTVTKSDDVTWDILKPDIFAVVMDFYSSGQPLFLDSQATAAKDTAIHEDDSETVAM 190

Query: 187 IKELLETRIRPAVQDDGGDIVYRGFDPDTGIVKLQMQGACSGCPSSSVTLKSGIENMLMH 246
           IKELLETRIRP+VQDDGGDI Y GFD +TGIVKL+MQGACSGCPSSSVTLKSGIENMLMH
Sbjct: 191 IKELLETRIRPSVQDDGGDIEYCGFDTETGIVKLRMQGACSGCPSSSVTLKSGIENMLMH 250

Query: 247 YVPEVKGVEQELDPEGEEAALSGQME 272
           YV EVKGVEQE D E EE   SG ME
Sbjct: 251 YVSEVKGVEQEFDGE-EEGTSSGPME 275


>AT3G20970.2 | Symbols: NFU4, ATNFU2 | NFU domain protein 4 |
           chr3:7348277-7349627 FORWARD LENGTH=222
          Length = 222

 Score =  263 bits (673), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 124/148 (83%), Positives = 136/148 (91%)

Query: 66  GQRRTMFIQTQSTPNPLSLMFHPGKPVMEVGSADFPNPRSAMNSPLAKSLFAIDGITRIF 125
           GQRRTMFIQTQSTPNP SLMF+PGKPVMEVGSADFPN RSA+ SPLAKS+++IDG+ R+F
Sbjct: 75  GQRRTMFIQTQSTPNPSSLMFYPGKPVMEVGSADFPNVRSALGSPLAKSIYSIDGVVRVF 134

Query: 126 FGSDFVTVTKSEDASWEFLKPEIFAAIMDFYSSGQPLFLDSQTSAAMDTAIKDDDSEIVA 185
           FGSDFVTVTKS+D SW+ LKPEIFAA+MDFYSSGQPLFLDSQ +AA DTAI +DDSE VA
Sbjct: 135 FGSDFVTVTKSDDVSWDILKPEIFAAVMDFYSSGQPLFLDSQAAAAKDTAISEDDSETVA 194

Query: 186 MIKELLETRIRPAVQDDGGDIVYRGFDP 213
           MIKELLETRIRPAVQDDGGDI Y GFDP
Sbjct: 195 MIKELLETRIRPAVQDDGGDIEYCGFDP 222


>AT5G49940.2 | Symbols: NFU2, ATCNFU2 | NIFU-like protein 2 |
           chr5:20315464-20317067 FORWARD LENGTH=185
          Length = 185

 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 9/110 (8%)

Query: 155 FYSSGQPLFLDSQTSAAMDTAIKDDDSEIVAMIKELLET---RIRPAVQDDGGDIVYRGF 211
           F SS Q LF  S+   A+ T    D    V + +E +E+    IRP +  DGG++     
Sbjct: 58  FLSSRQ-LFRRSKVVKAVATP---DPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEI 113

Query: 212 DPDTGIVKLQMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQELDPE 261
           D    IV++++QGAC  CPSS++T+K GIE  LM  +PE+  VE   D E
Sbjct: 114 D--GNIVRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEE 161


>AT5G49940.1 | Symbols: NFU2, ATCNFU2 | NIFU-like protein 2 |
           chr5:20315464-20317228 FORWARD LENGTH=235
          Length = 235

 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 9/110 (8%)

Query: 155 FYSSGQPLFLDSQTSAAMDTAIKDDDSEIVAMIKELLET---RIRPAVQDDGGDIVYRGF 211
           F SS Q LF  S+   A+ T    D    V + +E +E+    IRP +  DGG++     
Sbjct: 58  FLSSRQ-LFRRSKVVKAVATP---DPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEI 113

Query: 212 DPDTGIVKLQMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQELDPE 261
           D    IV++++QGAC  CPSS++T+K GIE  LM  +PE+  VE   D E
Sbjct: 114 D--GNIVRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEE 161


>AT4G25910.1 | Symbols: NFU3, ATCNFU3 | NFU domain protein 3 |
           chr4:13164128-13165094 FORWARD LENGTH=236
          Length = 236

 Score = 64.3 bits (155), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 2/67 (2%)

Query: 195 IRPAVQDDGGDIVYRGFDPDTGIVKLQMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGV 254
           +RP++  DGG++     + D  +V L++QGAC  CPSSS+TLK GIE+ L   +PE+  V
Sbjct: 96  VRPSLMADGGNVALH--EIDGLVVVLKLQGACGSCPSSSMTLKMGIESRLRDKIPEIMSV 153

Query: 255 EQELDPE 261
           EQ L+ E
Sbjct: 154 EQFLESE 160


>AT4G01940.1 | Symbols: NFU1, AtCNFU1 | NFU domain protein 1 |
           chr4:842265-843388 REVERSE LENGTH=231
          Length = 231

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 3/74 (4%)

Query: 189 ELLETRIRPAVQDDGGDIVYRGFDPDTGIVKLQMQGACSGCPSSSVTLKSGIENMLMH-Y 247
           +L+   +RP +  DGG++       + G+V L++QGAC+ CPSSS T+  GIE +L   +
Sbjct: 91  DLVLEDVRPFLISDGGNVDV--VSVEDGVVSLKLQGACTSCPSSSTTMTMGIERVLKEKF 148

Query: 248 VPEVKGVEQELDPE 261
              +K + Q  D E
Sbjct: 149 GDALKDIRQVFDEE 162