Miyakogusa Predicted Gene

Lj5g3v2288900.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2288900.1 tr|H6V8U3|H6V8U3_ACACO Chalcone isomerase
OS=Acacia confusa PE=2 SV=1,40.43,2e-19,Chalcone isomerase,Chalcone
isomerase; no description,Chalcone isomerase, 3-layer sandwich; no
descr,CUFF.57196.1
         (151 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G55120.1 | Symbols: TT5, A11, CFI | Chalcone-flavanone isomer...    77   4e-15
AT5G66230.2 | Symbols:  | Chalcone-flavanone isomerase family pr...    66   1e-11

>AT3G55120.1 | Symbols: TT5, A11, CFI | Chalcone-flavanone isomerase
           family protein | chr3:20430248-20431415 REVERSE
           LENGTH=246
          Length = 246

 Score = 77.4 bits (189), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 37/135 (27%)

Query: 2   APAKGSSLTPIQVENLRFPAAVTSPTTTKSYFLGGAGNSNKHHACRLIKLFIDPNLLNMH 61
           +P+   ++T + V+++ F  +V SP ++   FLGGAG                       
Sbjct: 9   SPSPFPAVTKLHVDSVTFVPSVKSPASSNPLFLGGAGV---------------------- 46

Query: 62  ILINCWALDNFIGERGLTIEGKFIKFTGIGVYLEDKVVDSLATKWKGKSSQELCDSLDFF 121
                         RGL I+GKF+ FT IGVYLE   V SL+ KWKGK+++EL +S+ FF
Sbjct: 47  --------------RGLDIQGKFVIFTVIGVYLEGNAVPSLSVKWKGKTTEELTESIPFF 92

Query: 122 RDIISSMY-LFIKFT 135
           R+I++  +  FIK T
Sbjct: 93  REIVTGAFEKFIKVT 107


>AT5G66230.2 | Symbols:  | Chalcone-flavanone isomerase family
           protein | chr5:26461177-26463873 FORWARD LENGTH=545
          Length = 545

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 44/122 (36%)

Query: 8   SLTPIQVENLRFPAAVTSPTTTKSYFLGGAGNSNKHHACRLIKLFIDPNLLNMHILINCW 67
           S+TP+ V+   FP AV SP + K  FLGGAG                             
Sbjct: 5   SVTPLHVDAFTFPPAVESPASHKRLFLGGAG----------------------------- 35

Query: 68  ALDNFIGERGLTIEGKFIKFTGIGVYLEDKVVDSLATKWKGKSSQELCDSLDFFRDIISS 127
                          KF+  T IGVYLE   + S++ KWKGK+++EL +S+ FFR +++ 
Sbjct: 36  ---------------KFVIVTVIGVYLEAMALPSISAKWKGKNAKELTESVPFFRQLVTG 80

Query: 128 MY 129
            +
Sbjct: 81  EF 82