Miyakogusa Predicted Gene

Lj5g3v2288560.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2288560.1 Non Chatacterized Hit- tr|Q7XA46|Q7XA46_SOLBU
Dopamine-responsive protein, putative OS=Solanum
bulbo,71.79,0.000000002,P-loop containing nucleoside triphosphate
hydrolases,NULL; Hypothetical protein YjiA, C-terminal
dom,CUFF.57181.1
         (274 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G80480.1 | Symbols: PTAC17 | plastid transcriptionally active...   392   e-109
AT1G15730.1 | Symbols:  | Cobalamin biosynthesis CobW-like prote...   385   e-107
AT1G26520.1 | Symbols:  | Cobalamin biosynthesis CobW-like prote...   160   7e-40

>AT1G80480.1 | Symbols: PTAC17 | plastid transcriptionally active 17
           | chr1:30258272-30260570 REVERSE LENGTH=444
          Length = 444

 Score =  392 bits (1007), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 196/274 (71%), Positives = 214/274 (78%), Gaps = 5/274 (1%)

Query: 1   MMLNNGCLCCTVRGDLVRMIAELVTAKKGKFDHIVIETTGLANPAPIIQTFYAEDQIFND 60
           +MLNNGCLCCTVRGDLVRMI ELV  KKGKFDHIVIETTGLANPAPIIQTFYAE++IFND
Sbjct: 146 VMLNNGCLCCTVRGDLVRMIGELVNTKKGKFDHIVIETTGLANPAPIIQTFYAEEEIFND 205

Query: 61  VKLDGVVTLVDAKHARLHLDEVKPKGVVNEAVEQIAYADRIIVNKTDLVDESDITSLVQR 120
           VKLDGVVTLVDAKHARLHLDEVKP+GVVNEAVEQIAYADRIIVNKTDLV E+++ S+VQR
Sbjct: 206 VKLDGVVTLVDAKHARLHLDEVKPEGVVNEAVEQIAYADRIIVNKTDLVGEAELGSVVQR 265

Query: 121 IRKINGLANLKRTEFGKVNLDYVLGIGGFDLERIESAVSGEGAKXXXXXXXXXXXXXXXX 180
           I+ IN +A + RT++G V+LDYVLGIGGFDLERIES+V+                     
Sbjct: 266 IKTINSMAQMTRTKYGNVDLDYVLGIGGFDLERIESSVN-----EDDKGDHHDHDHDHHH 320

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXPGVSSVSIVCEGSLDLEKANFWLGTLLMERSEDI 240
                                     PGVSSVSIVCEGSLDLEKAN WLGTLLMERSEDI
Sbjct: 321 DHNHDHDHHHHDGHDHHHHSHDHTHDPGVSSVSIVCEGSLDLEKANMWLGTLLMERSEDI 380

Query: 241 YRMKGLLSVQGMDERFVFQGVHDIFQGSPERLWG 274
           YRMKGLLSV  M+ERFVFQGVHDIFQGSP+RLWG
Sbjct: 381 YRMKGLLSVHTMEERFVFQGVHDIFQGSPDRLWG 414


>AT1G15730.1 | Symbols:  | Cobalamin biosynthesis CobW-like protein
           | chr1:5407535-5409937 REVERSE LENGTH=448
          Length = 448

 Score =  385 bits (988), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 190/273 (69%), Positives = 214/273 (78%), Gaps = 4/273 (1%)

Query: 1   MMLNNGCLCCTVRGDLVRMIAELVTAKKGKFDHIVIETTGLANPAPIIQTFYAEDQIFND 60
           MMLNNGCLCCTVRGDLVRMI+E+V  KKG+FDHIVIETTGLANPAPIIQTFYAED+IFND
Sbjct: 149 MMLNNGCLCCTVRGDLVRMISEMVQTKKGRFDHIVIETTGLANPAPIIQTFYAEDEIFND 208

Query: 61  VKLDGVVTLVDAKHARLHLDEVKPKGVVNEAVEQIAYADRIIVNKTDLVDESDITSLVQR 120
           VKLDGVVTLVDAKHARLHLDEVKP+G VNEAVEQIAYADRIIVNKTDLV E ++ S++QR
Sbjct: 209 VKLDGVVTLVDAKHARLHLDEVKPEGYVNEAVEQIAYADRIIVNKTDLVGEPELASVMQR 268

Query: 121 IRKINGLANLKRTEFGKVNLDYVLGIGGFDLERIESAVSGEGAKXXXXXXXXXXXXXXXX 180
           I+ IN +A++KRT++GKV+LDYVLGIGGFDLERIES+V+ E  +                
Sbjct: 269 IKTINSMAHMKRTKYGKVDLDYVLGIGGFDLERIESSVNEEEKE----DREGHDDHHHGH 324

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXPGVSSVSIVCEGSLDLEKANFWLGTLLMERSEDI 240
                                     PGV SVSIVCEG LDLEKAN WLG LL +RSEDI
Sbjct: 325 DCHDHHNEHEHEHEHEHHHSHDHTHDPGVGSVSIVCEGDLDLEKANMWLGALLYQRSEDI 384

Query: 241 YRMKGLLSVQGMDERFVFQGVHDIFQGSPERLW 273
           YRMKG+LSVQ MDERFVFQGVH+IF+GSP+RLW
Sbjct: 385 YRMKGILSVQDMDERFVFQGVHEIFEGSPDRLW 417


>AT1G26520.1 | Symbols:  | Cobalamin biosynthesis CobW-like protein
           | chr1:9163448-9165594 REVERSE LENGTH=374
          Length = 374

 Score =  160 bits (406), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 92/277 (33%), Positives = 143/277 (51%), Gaps = 41/277 (14%)

Query: 3   LNNGCLCCTVRGDLVRMIAELVTAKKGKFDHIVIETTGLANPAPIIQTFYAEDQIFNDVK 62
           L NGC+CCTV+  LV+ + +LV  +K + DHI++ETTGLANPAP+    + +DQ+ ++VK
Sbjct: 104 LANGCVCCTVKHSLVQALEQLVQ-RKDRLDHILLETTGLANPAPLASILWLDDQLESEVK 162

Query: 63  LDGVVTLVDAKHARLHLDEVKPKGVVNEAVEQIAYADRIIVNKTDLVDESDITSLVQRIR 122
           LD +VT+VDAK+ R  L+E +      EA  QIA+AD II+NK DL+ + +   L + I 
Sbjct: 163 LDCIVTVVDAKNLRFQLNERRDSSSFPEAFNQIAFADTIIMNKVDLISQEESDELEKEIH 222

Query: 123 KINGLANLKRTEFGKVNLDYVLGIGGFD---LERIESAVSGEGAKXXXXXXXXXXXXXXX 179
            IN LAN+ R+   +V+L  +L    +D   + R+ES +    +                
Sbjct: 223 SINSLANVIRSVRCQVDLSNILNCQAYDSTHVSRLESLLEANKS---------------- 266

Query: 180 XXXXXXXXXXXXXXXXXXXXXXXXXXXPGVSSVSIVCEGSLDLEKANFWLGTLLMERSE- 238
                                       GV ++ I     ++L+K   WL  +L ++   
Sbjct: 267 -------------------LTTTDLHDSGVRTLCISEPQPINLDKVRLWLEEILWDKKSE 307

Query: 239 -DIYRMKGLLSVQGMDERFVFQGVHDIFQGSPERLWG 274
            D+YR K +LS+Q  D+  + Q V DI++  P R W 
Sbjct: 308 MDVYRCKAVLSIQNSDQMHILQAVRDIYEIVPARKWS 344