Miyakogusa Predicted Gene
- Lj5g3v2259710.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2259710.1 Non Chatacterized Hit- tr|I1LFA0|I1LFA0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,71.04,0,GRAM,GRAM;
FAMILY NOT NAMED,NULL; domain in glucosyltransferases,
myotubularin,GRAM,CUFF.57108.1
(220 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G08350.1 | Symbols: | GRAM domain-containing protein / ABA-r... 213 6e-56
AT5G23370.1 | Symbols: | GRAM domain-containing protein / ABA-r... 211 3e-55
AT5G23350.1 | Symbols: | GRAM domain-containing protein / ABA-r... 204 3e-53
AT5G23360.1 | Symbols: | GRAM domain-containing protein / ABA-r... 198 3e-51
AT5G13200.1 | Symbols: | GRAM domain family protein | chr5:4207... 129 1e-30
AT1G28200.1 | Symbols: FIP1 | FH interacting protein 1 | chr1:98... 125 2e-29
AT4G01600.1 | Symbols: | GRAM domain family protein | chr4:6932... 124 4e-29
AT2G22475.1 | Symbols: GEM | GRAM domain family protein | chr2:9... 120 5e-28
AT4G01600.2 | Symbols: | GRAM domain family protein | chr4:6932... 119 2e-27
AT4G40100.1 | Symbols: | GRAM domain family protein | chr4:1858... 76 2e-14
AT2G22475.2 | Symbols: GEM | GRAM domain family protein | chr2:9... 72 3e-13
>AT5G08350.1 | Symbols: | GRAM domain-containing protein /
ABA-responsive protein-related | chr5:2686417-2687175
REVERSE LENGTH=222
Length = 222
Score = 213 bits (543), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 103/191 (53%), Positives = 143/191 (74%), Gaps = 1/191 (0%)
Query: 29 YLPDPATQGQYRTTRSKQGRVFYSIKNNTGRKEHN-LSQSVQEHVRVGANISETIKRKLS 87
YLPDPA+ ++R S + ++K+ RK+ + + V++ ++ ++ET+KRKLS
Sbjct: 23 YLPDPASFNKFRVPASSKKSEQSNVKSILKRKKTDGFTNGVRDQSKIRPKLTETVKRKLS 82
Query: 88 LGALIVQVGGVEKVFNQNFSVKEGEKLLKVSQCYLSTTSGPLAGLLFISTEKVAFCSERS 147
LGA I+QVGG+EK+F + F V EGEKL K+ QCYLSTT+GP+AGLLFIS++K+AFCSERS
Sbjct: 83 LGARILQVGGLEKIFKRLFRVSEGEKLFKMYQCYLSTTAGPIAGLLFISSKKMAFCSERS 142
Query: 148 LKVFTQKGHMRRIRYKVSIPLKKIKCVNQSQNVEKPKQKYIEIVTEDNFDFWLMGVINYQ 207
+KV + +G + R+ YKVSIPL KI VNQSQN +KP QKY+E+VT D FDFW MG ++YQ
Sbjct: 143 IKVDSPQGDIIRVHYKVSIPLCKIDRVNQSQNTKKPSQKYLEVVTVDGFDFWFMGFLSYQ 202
Query: 208 KTFRYLQQAVS 218
K F L++A+S
Sbjct: 203 KAFNCLEKALS 213
>AT5G23370.1 | Symbols: | GRAM domain-containing protein /
ABA-responsive protein-related | chr5:7863542-7864201
REVERSE LENGTH=219
Length = 219
Score = 211 bits (537), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 103/203 (50%), Positives = 142/203 (69%), Gaps = 2/203 (0%)
Query: 18 TYDQVQKSFNRYLPDPATQGQYRTTRSKQGRVFYSIKNNTGRKEHN--LSQSVQEHVRVG 75
T+ V+ S YLPDPA+ + + S + + RK+ N + V++ ++G
Sbjct: 12 TFPAVKTSPAGYLPDPASINKLQIPTSSKFSFLTGKGKSMLRKKKNDSFTNGVRDQDKLG 71
Query: 76 ANISETIKRKLSLGALIVQVGGVEKVFNQNFSVKEGEKLLKVSQCYLSTTSGPLAGLLFI 135
++ET+KRKLSLGA I+Q+GG+EK++ + F V + EKL K QCYLSTT+GP+AGLLFI
Sbjct: 72 PKLTETVKRKLSLGARILQMGGLEKIYKRLFKVSDEEKLFKAYQCYLSTTAGPIAGLLFI 131
Query: 136 STEKVAFCSERSLKVFTQKGHMRRIRYKVSIPLKKIKCVNQSQNVEKPKQKYIEIVTEDN 195
S++K+AFCSERS+KV + +G + R+ YKVSIPL KI VNQSQN KP QKY+E+VT D
Sbjct: 132 SSKKIAFCSERSIKVASPQGELNRVHYKVSIPLCKINGVNQSQNTTKPSQKYLEVVTVDG 191
Query: 196 FDFWLMGVINYQKTFRYLQQAVS 218
FDFW MG ++YQK F L+QA+S
Sbjct: 192 FDFWFMGFLSYQKAFNCLEQALS 214
>AT5G23350.1 | Symbols: | GRAM domain-containing protein /
ABA-responsive protein-related | chr5:7858545-7859387
REVERSE LENGTH=280
Length = 280
Score = 204 bits (520), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 98/191 (51%), Positives = 137/191 (71%), Gaps = 2/191 (1%)
Query: 29 YLPDPATQGQYRTTRSKQGRVFYSIKNNTGRKE--HNLSQSVQEHVRVGANISETIKRKL 86
YLPDPA+ ++ S + + RK+ + + ++ ++G ++ET+KRKL
Sbjct: 85 YLPDPASINNHQIPTSSKVSYLTGKGKSMLRKKKTDSFTNGARDQDKLGPKLTETVKRKL 144
Query: 87 SLGALIVQVGGVEKVFNQNFSVKEGEKLLKVSQCYLSTTSGPLAGLLFISTEKVAFCSER 146
SLGA I+Q+GG+EK++ + F V + EKL K QCYLSTT+GP+AGLLFIS++K+AFCSER
Sbjct: 145 SLGAKILQMGGLEKIYKRLFKVCDQEKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSER 204
Query: 147 SLKVFTQKGHMRRIRYKVSIPLKKIKCVNQSQNVEKPKQKYIEIVTEDNFDFWLMGVINY 206
S+KV + +G + R+ YKVSIPL KI VNQSQN +KP QKY+EIVT DNFDFW MG ++Y
Sbjct: 205 SIKVASPQGVLSRVHYKVSIPLCKINGVNQSQNTKKPSQKYLEIVTIDNFDFWFMGFVSY 264
Query: 207 QKTFRYLQQAV 217
QK F L++A+
Sbjct: 265 QKAFNCLEKAL 275
>AT5G23360.1 | Symbols: | GRAM domain-containing protein /
ABA-responsive protein-related | chr5:7861817-7862449
FORWARD LENGTH=210
Length = 210
Score = 198 bits (503), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 136/191 (71%), Gaps = 6/191 (3%)
Query: 29 YLPDPATQGQYRTTRSKQGRVFYSIKNNTGRKEHNLSQSVQEHVRVGANISETIKRKLSL 88
YLPDPA+ + + S + + +K + + ++ ++G ++ET+KRKLSL
Sbjct: 23 YLPDPASINKLQIPTSSKVSMLQK------KKTDSFTNGARDQDKLGPKLTETVKRKLSL 76
Query: 89 GALIVQVGGVEKVFNQNFSVKEGEKLLKVSQCYLSTTSGPLAGLLFISTEKVAFCSERSL 148
GA I+Q+GG+EK++ + F V + EKL K QCYLSTT G +AGLLFIS++K+AFCSERS+
Sbjct: 77 GAKILQMGGLEKIYKRLFKVCDKEKLFKAYQCYLSTTEGSIAGLLFISSKKIAFCSERSI 136
Query: 149 KVFTQKGHMRRIRYKVSIPLKKIKCVNQSQNVEKPKQKYIEIVTEDNFDFWLMGVINYQK 208
KV + +G + R+ YKVSIPL KI VNQSQN +KP Q+Y+E+VT DN+DFW MG ++YQK
Sbjct: 137 KVTSPQGDLTRVHYKVSIPLCKINGVNQSQNTKKPSQRYLEVVTVDNYDFWFMGFVSYQK 196
Query: 209 TFRYLQQAVSQ 219
F L++A+++
Sbjct: 197 AFNCLEKALNE 207
>AT5G13200.1 | Symbols: | GRAM domain family protein |
chr5:4207081-4208079 FORWARD LENGTH=272
Length = 272
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 93/161 (57%)
Query: 59 RKEHNLSQSVQEHVRVGANISETIKRKLSLGALIVQVGGVEKVFNQNFSVKEGEKLLKVS 118
RK +++++ +++ G ++SET K++L A + GG E +F Q F + E L K
Sbjct: 102 RKAETVARNLWHNLKTGPSMSETAWGKVNLTAKAITKGGFESLFRQIFGTEPNETLKKTF 161
Query: 119 QCYLSTTSGPLAGLLFISTEKVAFCSERSLKVFTQKGHMRRIRYKVSIPLKKIKCVNQSQ 178
CYLSTT+GP+AG +++S +VAFCS+R L G Y+V +PL + VN
Sbjct: 162 ACYLSTTTGPVAGTVYLSNARVAFCSDRPLYFTAPSGQESWSYYRVVVPLANVATVNPVV 221
Query: 179 NVEKPKQKYIEIVTEDNFDFWLMGVINYQKTFRYLQQAVSQ 219
E P +KYI++ T D DFW MG +NY+K +L +VS
Sbjct: 222 VKETPPEKYIQLTTVDGHDFWFMGFVNYEKATHHLLTSVSD 262
>AT1G28200.1 | Symbols: FIP1 | FH interacting protein 1 |
chr1:9850395-9852300 REVERSE LENGTH=259
Length = 259
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 109/192 (56%), Gaps = 3/192 (1%)
Query: 27 NRYL-PDPATQGQYRTTRSKQGRVFYSIKNNTGRKEHNLSQSVQEHVRVGANISETIKRK 85
N Y+ P PA + + + G+ + + + +K +L+ + +H++ G ++++ +
Sbjct: 65 NPYVSPSPAPRNTMDSVKDTLGK-WGKMAADATKKAEDLAGNFWQHLKTGPSVADAAVSR 123
Query: 86 LSLGALIVQVGGVEKVFNQNFSVKEGEKLLKVSQCYLSTTSGPLAGLLFISTEKVAFCSE 145
++ G I+ GG EKVF Q F EKLLK CYLST++GP+ G++++ST K+AF S+
Sbjct: 124 IAQGTKILAEGGYEKVFKQTFDCLPDEKLLKTYACYLSTSAGPVLGVMYLSTHKLAFSSD 183
Query: 146 RSLKVFTQKGHMRRIRYKVSIPLKKIKCVNQSQNVEKPKQKYIEIVTEDNFDFWLMGVIN 205
L + + YKV +P ++K VN S + KYI++++ DN +FW MG +
Sbjct: 184 NPLS-YKEGEQTLWSYYKVVLPANQLKAVNPSTSRVNTSDKYIQVISIDNHEFWFMGFVT 242
Query: 206 YQKTFRYLQQAV 217
Y+ + LQ+AV
Sbjct: 243 YESAVKSLQEAV 254
>AT4G01600.1 | Symbols: | GRAM domain family protein |
chr4:693210-694319 FORWARD LENGTH=233
Length = 233
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 98/160 (61%), Gaps = 1/160 (0%)
Query: 59 RKEHNLSQSVQEHVRVGANISETIKRKLSLGALIVQVGGVEKVFNQNFSVKEGEKLLKVS 118
RK L +++H++ +IS+ +LS G ++ GG E+VF + F V EKLL
Sbjct: 65 RKAEALVGGLKDHLKFSPSISDAAMARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDSF 124
Query: 119 QCYLSTTSGPLAGLLFISTEKVAFCSERSLKVFTQK-GHMRRIRYKVSIPLKKIKCVNQS 177
CY+STTSGP+ G+++IS ++AFCS+ ++++ + G+ YKV + +KI ++ S
Sbjct: 125 VCYISTTSGPVTGVIYISNRRIAFCSDYAIRLPSSAGGNGVAAYYKVVMEWEKISSISSS 184
Query: 178 QNVEKPKQKYIEIVTEDNFDFWLMGVINYQKTFRYLQQAV 217
NV KP ++Y+ +VT D F+FW MG ++Y F L +A+
Sbjct: 185 TNVLKPSERYVHMVTRDGFEFWFMGFVSYIDAFNCLNKAL 224
>AT2G22475.1 | Symbols: GEM | GRAM domain family protein |
chr2:9541523-9544778 FORWARD LENGTH=299
Length = 299
Score = 120 bits (302), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 92/160 (57%), Gaps = 1/160 (0%)
Query: 58 GRKEHNLSQSVQEHVRVGANISETIKRKLSLGALIVQVGGVEKVFNQNFSVKEGEKLLKV 117
+K +L+ + +H+R + ++ +++ + GG EK+F Q F E+LL
Sbjct: 133 AKKTESLAGNTWQHLRTAPSFADAAMGRIAQSTKVFAEGGYEKIFRQTFETDPEEQLLNS 192
Query: 118 SQCYLSTTSGPLAGLLFISTEKVAFCSERSLKVFTQKGHMRRIRYKVSIPLKKIKCVNQS 177
CYLST++GP+ G+L+IS+ K+A+CS+ L + YKV IPL ++K VN S
Sbjct: 193 FACYLSTSAGPVMGVLYISSAKLAYCSDNPLS-YKNGDQTEWSYYKVVIPLHQLKAVNPS 251
Query: 178 QNVEKPKQKYIEIVTEDNFDFWLMGVINYQKTFRYLQQAV 217
++ P +KYI++++ DN +FW MG +NY LQ ++
Sbjct: 252 ASIVNPAEKYIQVISVDNHEFWFMGFLNYDGAVTSLQDSL 291
>AT4G01600.2 | Symbols: | GRAM domain family protein |
chr4:693210-694319 FORWARD LENGTH=228
Length = 228
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 100/168 (59%), Gaps = 3/168 (1%)
Query: 53 IKNNTGRKEHNLSQSVQE--HVRVGANISETIKRKLSLGALIVQVGGVEKVFNQNFSVKE 110
+ N G+K + ++ + V+ +IS+ +LS G ++ GG E+VF + F V
Sbjct: 52 VLNRCGKKVEDATRKAEALVGVKFSPSISDAAMARLSQGTKMIVEGGPERVFQREFGVLA 111
Query: 111 GEKLLKVSQCYLSTTSGPLAGLLFISTEKVAFCSERSLKVFTQK-GHMRRIRYKVSIPLK 169
EKLL CY+STTSGP+ G+++IS ++AFCS+ ++++ + G+ YKV + +
Sbjct: 112 VEKLLDSFVCYISTTSGPVTGVIYISNRRIAFCSDYAIRLPSSAGGNGVAAYYKVVMEWE 171
Query: 170 KIKCVNQSQNVEKPKQKYIEIVTEDNFDFWLMGVINYQKTFRYLQQAV 217
KI ++ S NV KP ++Y+ +VT D F+FW MG ++Y F L +A+
Sbjct: 172 KISSISSSTNVLKPSERYVHMVTRDGFEFWFMGFVSYIDAFNCLNKAL 219
>AT4G40100.1 | Symbols: | GRAM domain family protein |
chr4:18583244-18584524 FORWARD LENGTH=225
Length = 225
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 29/126 (23%)
Query: 92 IVQVGGVEKVFNQNFSVKEGEKLLKVSQCYLSTTSGPLAGLLFISTEKVAFCSERSLKVF 151
++ GG EK+F Q F E+L CYLST++GP+ G+L+
Sbjct: 120 VLAEGGYEKIFRQTFETVPEEQLQNSFACYLSTSAGPVMGVLY----------------- 162
Query: 152 TQKGHMRRIRYKVSIPLKKIKCVNQSQNVEKPKQKYIEIVTEDNFDFWLMGVINYQKTFR 211
V IPL ++K VN S + P +KYI++++ D+ +FW MG +NY+
Sbjct: 163 ------------VVIPLHQLKSVNPSISTVNPAEKYIQVISVDDHEFWFMGFLNYEGAVT 210
Query: 212 YLQQAV 217
LQ +
Sbjct: 211 SLQDTL 216
>AT2G22475.2 | Symbols: GEM | GRAM domain family protein |
chr2:9541523-9544242 FORWARD LENGTH=248
Length = 248
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 58 GRKEHNLSQSVQEHVRVGANISETIKRKLSLGALIVQVGGVEKVFNQNFSVKEGEKLLKV 117
+K +L+ + +H+R + ++ +++ + GG EK+F Q F E+LL
Sbjct: 133 AKKTESLAGNTWQHLRTAPSFADAAMGRIAQSTKVFAEGGYEKIFRQTFETDPEEQLLNS 192
Query: 118 SQCYLSTTSGPLAGLLFISTEKVAFCSERSLKVFTQKGHMRRIRYKVSIP 167
CYLST++GP+ G+L+IS+ K+A+CS+ L + YKV P
Sbjct: 193 FACYLSTSAGPVMGVLYISSAKLAYCSDNPLS-YKNGDQTEWSYYKVMCP 241