Miyakogusa Predicted Gene

Lj5g3v2259700.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2259700.3 Non Chatacterized Hit- tr|I3SJN8|I3SJN8_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2 SV,80.93,0,FAMILY
NOT NAMED,NULL; domain in glucosyltransferases, myotubularin,GRAM;
GRAM,GRAM,CUFF.57119.3
         (187 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G08350.1 | Symbols:  | GRAM domain-containing protein / ABA-r...   208   2e-54
AT5G23370.1 | Symbols:  | GRAM domain-containing protein / ABA-r...   207   5e-54
AT5G23350.1 | Symbols:  | GRAM domain-containing protein / ABA-r...   204   2e-53
AT5G23360.1 | Symbols:  | GRAM domain-containing protein / ABA-r...   199   1e-51
AT4G01600.1 | Symbols:  | GRAM domain family protein | chr4:6932...   122   1e-28
AT5G13200.1 | Symbols:  | GRAM domain family protein | chr5:4207...   122   2e-28
AT2G22475.1 | Symbols: GEM | GRAM domain family protein | chr2:9...   117   5e-27
AT1G28200.1 | Symbols: FIP1 | FH interacting protein 1 | chr1:98...   112   1e-25
AT4G01600.2 | Symbols:  | GRAM domain family protein | chr4:6932...   112   2e-25
AT2G22475.2 | Symbols: GEM | GRAM domain family protein | chr2:9...    88   3e-18
AT4G40100.1 | Symbols:  | GRAM domain family protein | chr4:1858...    68   4e-12

>AT5G08350.1 | Symbols:  | GRAM domain-containing protein /
           ABA-responsive protein-related | chr5:2686417-2687175
           REVERSE LENGTH=222
          Length = 222

 Score =  208 bits (529), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 104/171 (60%), Positives = 132/171 (77%), Gaps = 9/171 (5%)

Query: 21  YLPDSSG----KYSKSITKSKQGKSNSVLTRMNMLGRKADSFAHGVREHVRLGPKISDTV 76
           YLPD +     +   S  KS+Q    S+L R     +K D F +GVR+  ++ PK+++TV
Sbjct: 23  YLPDPASFNKFRVPASSKKSEQSNVKSILKR-----KKTDGFTNGVRDQSKIRPKLTETV 77

Query: 77  KGKLSLGARILQVGGVEKVFKQIFSVRDGEKLLKASQCYLSTTSGPIAGLLFISTDKIAF 136
           K KLSLGARILQVGG+EK+FK++F V +GEKL K  QCYLSTT+GPIAGLLFIS+ K+AF
Sbjct: 78  KRKLSLGARILQVGGLEKIFKRLFRVSEGEKLFKMYQCYLSTTAGPIAGLLFISSKKMAF 137

Query: 137 CSERSIKISSPKGELIRVHYKVSIPLEKIKCVNQSQNVKKPSEKYIEIVSV 187
           CSERSIK+ SP+G++IRVHYKVSIPL KI  VNQSQN KKPS+KY+E+V+V
Sbjct: 138 CSERSIKVDSPQGDIIRVHYKVSIPLCKIDRVNQSQNTKKPSQKYLEVVTV 188


>AT5G23370.1 | Symbols:  | GRAM domain-containing protein /
           ABA-responsive protein-related | chr5:7863542-7864201
           REVERSE LENGTH=219
          Length = 219

 Score =  207 bits (526), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 106/172 (61%), Positives = 132/172 (76%), Gaps = 10/172 (5%)

Query: 21  YLPDSSGKYSKSITKSKQ-----GKSNSVLTRMNMLGRKADSFAHGVREHVRLGPKISDT 75
           YLPD +      I  S +     GK  S+L +     +K DSF +GVR+  +LGPK+++T
Sbjct: 23  YLPDPASINKLQIPTSSKFSFLTGKGKSMLRK-----KKNDSFTNGVRDQDKLGPKLTET 77

Query: 76  VKGKLSLGARILQVGGVEKVFKQIFSVRDGEKLLKASQCYLSTTSGPIAGLLFISTDKIA 135
           VK KLSLGARILQ+GG+EK++K++F V D EKL KA QCYLSTT+GPIAGLLFIS+ KIA
Sbjct: 78  VKRKLSLGARILQMGGLEKIYKRLFKVSDEEKLFKAYQCYLSTTAGPIAGLLFISSKKIA 137

Query: 136 FCSERSIKISSPKGELIRVHYKVSIPLEKIKCVNQSQNVKKPSEKYIEIVSV 187
           FCSERSIK++SP+GEL RVHYKVSIPL KI  VNQSQN  KPS+KY+E+V+V
Sbjct: 138 FCSERSIKVASPQGELNRVHYKVSIPLCKINGVNQSQNTTKPSQKYLEVVTV 189


>AT5G23350.1 | Symbols:  | GRAM domain-containing protein /
           ABA-responsive protein-related | chr5:7858545-7859387
           REVERSE LENGTH=280
          Length = 280

 Score =  204 bits (520), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 104/172 (60%), Positives = 132/172 (76%), Gaps = 10/172 (5%)

Query: 21  YLPDSSGKYSKSITKSKQ-----GKSNSVLTRMNMLGRKADSFAHGVREHVRLGPKISDT 75
           YLPD +   +  I  S +     GK  S+L +     +K DSF +G R+  +LGPK+++T
Sbjct: 85  YLPDPASINNHQIPTSSKVSYLTGKGKSMLRK-----KKTDSFTNGARDQDKLGPKLTET 139

Query: 76  VKGKLSLGARILQVGGVEKVFKQIFSVRDGEKLLKASQCYLSTTSGPIAGLLFISTDKIA 135
           VK KLSLGA+ILQ+GG+EK++K++F V D EKL KA QCYLSTT+GPIAGLLFIS+ KIA
Sbjct: 140 VKRKLSLGAKILQMGGLEKIYKRLFKVCDQEKLFKAYQCYLSTTAGPIAGLLFISSKKIA 199

Query: 136 FCSERSIKISSPKGELIRVHYKVSIPLEKIKCVNQSQNVKKPSEKYIEIVSV 187
           FCSERSIK++SP+G L RVHYKVSIPL KI  VNQSQN KKPS+KY+EIV++
Sbjct: 200 FCSERSIKVASPQGVLSRVHYKVSIPLCKINGVNQSQNTKKPSQKYLEIVTI 251


>AT5G23360.1 | Symbols:  | GRAM domain-containing protein /
           ABA-responsive protein-related | chr5:7861817-7862449
           FORWARD LENGTH=210
          Length = 210

 Score =  199 bits (505), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 102/168 (60%), Positives = 132/168 (78%), Gaps = 10/168 (5%)

Query: 21  YLPDSSGKYSKSITKSKQGKSNSVLTRMNMLGRK-ADSFAHGVREHVRLGPKISDTVKGK 79
           YLPD +     SI K +   S    ++++ML +K  DSF +G R+  +LGPK+++TVK K
Sbjct: 23  YLPDPA-----SINKLQIPTS----SKVSMLQKKKTDSFTNGARDQDKLGPKLTETVKRK 73

Query: 80  LSLGARILQVGGVEKVFKQIFSVRDGEKLLKASQCYLSTTSGPIAGLLFISTDKIAFCSE 139
           LSLGA+ILQ+GG+EK++K++F V D EKL KA QCYLSTT G IAGLLFIS+ KIAFCSE
Sbjct: 74  LSLGAKILQMGGLEKIYKRLFKVCDKEKLFKAYQCYLSTTEGSIAGLLFISSKKIAFCSE 133

Query: 140 RSIKISSPKGELIRVHYKVSIPLEKIKCVNQSQNVKKPSEKYIEIVSV 187
           RSIK++SP+G+L RVHYKVSIPL KI  VNQSQN KKPS++Y+E+V+V
Sbjct: 134 RSIKVTSPQGDLTRVHYKVSIPLCKINGVNQSQNTKKPSQRYLEVVTV 181


>AT4G01600.1 | Symbols:  | GRAM domain family protein |
           chr4:693210-694319 FORWARD LENGTH=233
          Length = 233

 Score =  122 bits (307), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 58/135 (42%), Positives = 92/135 (68%), Gaps = 1/135 (0%)

Query: 53  RKADSFAHGVREHVRLGPKISDTVKGKLSLGARILQVGGVEKVFKQIFSVRDGEKLLKAS 112
           RKA++   G+++H++  P ISD    +LS G +++  GG E+VF++ F V   EKLL + 
Sbjct: 65  RKAEALVGGLKDHLKFSPSISDAAMARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDSF 124

Query: 113 QCYLSTTSGPIAGLLFISTDKIAFCSERSIKI-SSPKGELIRVHYKVSIPLEKIKCVNQS 171
            CY+STTSGP+ G+++IS  +IAFCS+ +I++ SS  G  +  +YKV +  EKI  ++ S
Sbjct: 125 VCYISTTSGPVTGVIYISNRRIAFCSDYAIRLPSSAGGNGVAAYYKVVMEWEKISSISSS 184

Query: 172 QNVKKPSEKYIEIVS 186
            NV KPSE+Y+ +V+
Sbjct: 185 TNVLKPSERYVHMVT 199


>AT5G13200.1 | Symbols:  | GRAM domain family protein |
           chr5:4207081-4208079 FORWARD LENGTH=272
          Length = 272

 Score =  122 bits (305), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 89/144 (61%)

Query: 44  VLTRMNMLGRKADSFAHGVREHVRLGPKISDTVKGKLSLGARILQVGGVEKVFKQIFSVR 103
           V+   +   RKA++ A  +  +++ GP +S+T  GK++L A+ +  GG E +F+QIF   
Sbjct: 93  VIGMFHTWSRKAETVARNLWHNLKTGPSMSETAWGKVNLTAKAITKGGFESLFRQIFGTE 152

Query: 104 DGEKLLKASQCYLSTTSGPIAGLLFISTDKIAFCSERSIKISSPKGELIRVHYKVSIPLE 163
             E L K   CYLSTT+GP+AG +++S  ++AFCS+R +  ++P G+    +Y+V +PL 
Sbjct: 153 PNETLKKTFACYLSTTTGPVAGTVYLSNARVAFCSDRPLYFTAPSGQESWSYYRVVVPLA 212

Query: 164 KIKCVNQSQNVKKPSEKYIEIVSV 187
            +  VN     + P EKYI++ +V
Sbjct: 213 NVATVNPVVVKETPPEKYIQLTTV 236


>AT2G22475.1 | Symbols: GEM | GRAM domain family protein |
           chr2:9541523-9544778 FORWARD LENGTH=299
          Length = 299

 Score =  117 bits (292), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 88/142 (61%), Gaps = 3/142 (2%)

Query: 47  RMNMLGRKADSFAHGVREHVRLGPKISDTVKGKLSLGARILQVGGVEKVFKQIFSVRDGE 106
           R+    +K +S A    +H+R  P  +D   G+++   ++   GG EK+F+Q F     E
Sbjct: 128 RVAEAAKKTESLAGNTWQHLRTAPSFADAAMGRIAQSTKVFAEGGYEKIFRQTFETDPEE 187

Query: 107 KLLKASQCYLSTTSGPIAGLLFISTDKIAFCSERSIKISSPKGELIRV-HYKVSIPLEKI 165
           +LL +  CYLST++GP+ G+L+IS+ K+A+CS+    +S   G+     +YKV IPL ++
Sbjct: 188 QLLNSFACYLSTSAGPVMGVLYISSAKLAYCSDN--PLSYKNGDQTEWSYYKVVIPLHQL 245

Query: 166 KCVNQSQNVKKPSEKYIEIVSV 187
           K VN S ++  P+EKYI+++SV
Sbjct: 246 KAVNPSASIVNPAEKYIQVISV 267


>AT1G28200.1 | Symbols: FIP1 | FH interacting protein 1 |
           chr1:9850395-9852300 REVERSE LENGTH=259
          Length = 259

 Score =  112 bits (281), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 54/136 (39%), Positives = 87/136 (63%), Gaps = 3/136 (2%)

Query: 53  RKADSFAHGVREHVRLGPKISDTVKGKLSLGARILQVGGVEKVFKQIFSVRDGEKLLKAS 112
           +KA+  A    +H++ GP ++D    +++ G +IL  GG EKVFKQ F     EKLLK  
Sbjct: 97  KKAEDLAGNFWQHLKTGPSVADAAVSRIAQGTKILAEGGYEKVFKQTFDCLPDEKLLKTY 156

Query: 113 QCYLSTTSGPIAGLLFISTDKIAFCSERSIKISSPKGE-LIRVHYKVSIPLEKIKCVNQS 171
            CYLST++GP+ G++++ST K+AF S+    +S  +GE  +  +YKV +P  ++K VN S
Sbjct: 157 ACYLSTSAGPVLGVMYLSTHKLAFSSDN--PLSYKEGEQTLWSYYKVVLPANQLKAVNPS 214

Query: 172 QNVKKPSEKYIEIVSV 187
            +    S+KYI+++S+
Sbjct: 215 TSRVNTSDKYIQVISI 230


>AT4G01600.2 | Symbols:  | GRAM domain family protein |
           chr4:693210-694319 FORWARD LENGTH=228
          Length = 228

 Score =  112 bits (279), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 59/148 (39%), Positives = 91/148 (61%), Gaps = 3/148 (2%)

Query: 42  NSVLTRMNMLGRKADSFAHGVRE--HVRLGPKISDTVKGKLSLGARILQVGGVEKVFKQI 99
           + VL  +N  G+K +           V+  P ISD    +LS G +++  GG E+VF++ 
Sbjct: 47  DKVLEVLNRCGKKVEDATRKAEALVGVKFSPSISDAAMARLSQGTKMIVEGGPERVFQRE 106

Query: 100 FSVRDGEKLLKASQCYLSTTSGPIAGLLFISTDKIAFCSERSIKI-SSPKGELIRVHYKV 158
           F V   EKLL +  CY+STTSGP+ G+++IS  +IAFCS+ +I++ SS  G  +  +YKV
Sbjct: 107 FGVLAVEKLLDSFVCYISTTSGPVTGVIYISNRRIAFCSDYAIRLPSSAGGNGVAAYYKV 166

Query: 159 SIPLEKIKCVNQSQNVKKPSEKYIEIVS 186
            +  EKI  ++ S NV KPSE+Y+ +V+
Sbjct: 167 VMEWEKISSISSSTNVLKPSERYVHMVT 194


>AT2G22475.2 | Symbols: GEM | GRAM domain family protein |
           chr2:9541523-9544242 FORWARD LENGTH=248
          Length = 248

 Score = 88.2 bits (217), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 67/116 (57%), Gaps = 3/116 (2%)

Query: 47  RMNMLGRKADSFAHGVREHVRLGPKISDTVKGKLSLGARILQVGGVEKVFKQIFSVRDGE 106
           R+    +K +S A    +H+R  P  +D   G+++   ++   GG EK+F+Q F     E
Sbjct: 128 RVAEAAKKTESLAGNTWQHLRTAPSFADAAMGRIAQSTKVFAEGGYEKIFRQTFETDPEE 187

Query: 107 KLLKASQCYLSTTSGPIAGLLFISTDKIAFCSERSIKISSPKGELIRV-HYKVSIP 161
           +LL +  CYLST++GP+ G+L+IS+ K+A+CS+    +S   G+     +YKV  P
Sbjct: 188 QLLNSFACYLSTSAGPVMGVLYISSAKLAYCSDN--PLSYKNGDQTEWSYYKVMCP 241


>AT4G40100.1 | Symbols:  | GRAM domain family protein |
           chr4:18583244-18584524 FORWARD LENGTH=225
          Length = 225

 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 37/142 (26%)

Query: 47  RMNMLGRKADSFAHGVREH-VRLGPKISDTVKGKLSLGARILQVGGVEKVFKQIFSVRDG 105
           R+     KA+S A    +H +R          G+++   ++L  GG EK+F+Q F     
Sbjct: 87  RVGEAAMKAESLAGNTWQHPLR-------AAMGRIAQSTKVLAEGGYEKIFRQTFETVPE 139

Query: 106 EKLLKASQCYLSTTSGPIAGLLFISTDKIAFCSERSIKISSPKGELIRVHYKVSIPLEKI 165
           E+L  +  CYLST++GP+ G+L+                             V IPL ++
Sbjct: 140 EQLQNSFACYLSTSAGPVMGVLY-----------------------------VVIPLHQL 170

Query: 166 KCVNQSQNVKKPSEKYIEIVSV 187
           K VN S +   P+EKYI+++SV
Sbjct: 171 KSVNPSISTVNPAEKYIQVISV 192