Miyakogusa Predicted Gene

Lj5g3v2259700.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2259700.1 Non Chatacterized Hit- tr|B7FJD2|B7FJD2_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,79.82,0,GRAM,GRAM; FAMILY NOT NAMED,NULL; domain in
glucosyltransferases, myotubularin,GRAM,CUFF.57119.1
         (217 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G08350.1 | Symbols:  | GRAM domain-containing protein / ABA-r...   247   4e-66
AT5G23370.1 | Symbols:  | GRAM domain-containing protein / ABA-r...   245   2e-65
AT5G23350.1 | Symbols:  | GRAM domain-containing protein / ABA-r...   238   2e-63
AT5G23360.1 | Symbols:  | GRAM domain-containing protein / ABA-r...   231   3e-61
AT4G01600.1 | Symbols:  | GRAM domain family protein | chr4:6932...   157   7e-39
AT5G13200.1 | Symbols:  | GRAM domain family protein | chr5:4207...   149   1e-36
AT4G01600.2 | Symbols:  | GRAM domain family protein | chr4:6932...   146   9e-36
AT1G28200.1 | Symbols: FIP1 | FH interacting protein 1 | chr1:98...   139   2e-33
AT2G22475.1 | Symbols: GEM | GRAM domain family protein | chr2:9...   137   4e-33
AT4G40100.1 | Symbols:  | GRAM domain family protein | chr4:1858...    91   5e-19
AT2G22475.2 | Symbols: GEM | GRAM domain family protein | chr2:9...    85   3e-17

>AT5G08350.1 | Symbols:  | GRAM domain-containing protein /
           ABA-responsive protein-related | chr5:2686417-2687175
           REVERSE LENGTH=222
          Length = 222

 Score =  247 bits (631), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 119/195 (61%), Positives = 151/195 (77%), Gaps = 9/195 (4%)

Query: 21  YLPDSSG----KYSKSITKSKQGKSNSVLTRMNMLGRKADSFAHGVREHVRLGPKISDTV 76
           YLPD +     +   S  KS+Q    S+L R     +K D F +GVR+  ++ PK+++TV
Sbjct: 23  YLPDPASFNKFRVPASSKKSEQSNVKSILKR-----KKTDGFTNGVRDQSKIRPKLTETV 77

Query: 77  KGKLSLGARILQVGGVEKVFKQLFSIKDGEKLLKASQCYLSTTSGPIAGLLFISTHKVSF 136
           K KLSLGARILQVGG+EK+FK+LF + +GEKL K  QCYLSTT+GPIAGLLFIS+ K++F
Sbjct: 78  KRKLSLGARILQVGGLEKIFKRLFRVSEGEKLFKMYQCYLSTTAGPIAGLLFISSKKMAF 137

Query: 137 CSERSIKVSSPKGEVIRVHYKVSIPLEKIKCVNQSQNVKKPSEKYIELVTEDGFDFWLMG 196
           CSERSIKV SP+G++IRVHYKVSIPL KI  VNQSQN KKPS+KY+E+VT DGFDFW MG
Sbjct: 138 CSERSIKVDSPQGDIIRVHYKVSIPLCKIDRVNQSQNTKKPSQKYLEVVTVDGFDFWFMG 197

Query: 197 FFNYQKSLRCLQQAI 211
           F +YQK+  CL++A+
Sbjct: 198 FLSYQKAFNCLEKAL 212


>AT5G23370.1 | Symbols:  | GRAM domain-containing protein /
           ABA-responsive protein-related | chr5:7863542-7864201
           REVERSE LENGTH=219
          Length = 219

 Score =  245 bits (625), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 120/196 (61%), Positives = 151/196 (77%), Gaps = 10/196 (5%)

Query: 21  YLPDSSGKYSKSITKSKQ-----GKSNSVLTRMNMLGRKADSFAHGVREHVRLGPKISDT 75
           YLPD +      I  S +     GK  S+L +     +K DSF +GVR+  +LGPK+++T
Sbjct: 23  YLPDPASINKLQIPTSSKFSFLTGKGKSMLRK-----KKNDSFTNGVRDQDKLGPKLTET 77

Query: 76  VKGKLSLGARILQVGGVEKVFKQLFSIKDGEKLLKASQCYLSTTSGPIAGLLFISTHKVS 135
           VK KLSLGARILQ+GG+EK++K+LF + D EKL KA QCYLSTT+GPIAGLLFIS+ K++
Sbjct: 78  VKRKLSLGARILQMGGLEKIYKRLFKVSDEEKLFKAYQCYLSTTAGPIAGLLFISSKKIA 137

Query: 136 FCSERSIKVSSPKGEVIRVHYKVSIPLEKIKCVNQSQNVKKPSEKYIELVTEDGFDFWLM 195
           FCSERSIKV+SP+GE+ RVHYKVSIPL KI  VNQSQN  KPS+KY+E+VT DGFDFW M
Sbjct: 138 FCSERSIKVASPQGELNRVHYKVSIPLCKINGVNQSQNTTKPSQKYLEVVTVDGFDFWFM 197

Query: 196 GFFNYQKSLRCLQQAI 211
           GF +YQK+  CL+QA+
Sbjct: 198 GFLSYQKAFNCLEQAL 213


>AT5G23350.1 | Symbols:  | GRAM domain-containing protein /
           ABA-responsive protein-related | chr5:7858545-7859387
           REVERSE LENGTH=280
          Length = 280

 Score =  238 bits (608), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 116/196 (59%), Positives = 150/196 (76%), Gaps = 10/196 (5%)

Query: 21  YLPDSSGKYSKSITKSKQ-----GKSNSVLTRMNMLGRKADSFAHGVREHVRLGPKISDT 75
           YLPD +   +  I  S +     GK  S+L +     +K DSF +G R+  +LGPK+++T
Sbjct: 85  YLPDPASINNHQIPTSSKVSYLTGKGKSMLRK-----KKTDSFTNGARDQDKLGPKLTET 139

Query: 76  VKGKLSLGARILQVGGVEKVFKQLFSIKDGEKLLKASQCYLSTTSGPIAGLLFISTHKVS 135
           VK KLSLGA+ILQ+GG+EK++K+LF + D EKL KA QCYLSTT+GPIAGLLFIS+ K++
Sbjct: 140 VKRKLSLGAKILQMGGLEKIYKRLFKVCDQEKLFKAYQCYLSTTAGPIAGLLFISSKKIA 199

Query: 136 FCSERSIKVSSPKGEVIRVHYKVSIPLEKIKCVNQSQNVKKPSEKYIELVTEDGFDFWLM 195
           FCSERSIKV+SP+G + RVHYKVSIPL KI  VNQSQN KKPS+KY+E+VT D FDFW M
Sbjct: 200 FCSERSIKVASPQGVLSRVHYKVSIPLCKINGVNQSQNTKKPSQKYLEIVTIDNFDFWFM 259

Query: 196 GFFNYQKSLRCLQQAI 211
           GF +YQK+  CL++A+
Sbjct: 260 GFVSYQKAFNCLEKAL 275


>AT5G23360.1 | Symbols:  | GRAM domain-containing protein /
           ABA-responsive protein-related | chr5:7861817-7862449
           FORWARD LENGTH=210
          Length = 210

 Score =  231 bits (588), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 113/192 (58%), Positives = 150/192 (78%), Gaps = 10/192 (5%)

Query: 21  YLPDSSGKYSKSITKSKQGKSNSVLTRMNMLGRK-ADSFAHGVREHVRLGPKISDTVKGK 79
           YLPD +     SI K +   S    ++++ML +K  DSF +G R+  +LGPK+++TVK K
Sbjct: 23  YLPDPA-----SINKLQIPTS----SKVSMLQKKKTDSFTNGARDQDKLGPKLTETVKRK 73

Query: 80  LSLGARILQVGGVEKVFKQLFSIKDGEKLLKASQCYLSTTSGPIAGLLFISTHKVSFCSE 139
           LSLGA+ILQ+GG+EK++K+LF + D EKL KA QCYLSTT G IAGLLFIS+ K++FCSE
Sbjct: 74  LSLGAKILQMGGLEKIYKRLFKVCDKEKLFKAYQCYLSTTEGSIAGLLFISSKKIAFCSE 133

Query: 140 RSIKVSSPKGEVIRVHYKVSIPLEKIKCVNQSQNVKKPSEKYIELVTEDGFDFWLMGFFN 199
           RSIKV+SP+G++ RVHYKVSIPL KI  VNQSQN KKPS++Y+E+VT D +DFW MGF +
Sbjct: 134 RSIKVTSPQGDLTRVHYKVSIPLCKINGVNQSQNTKKPSQRYLEVVTVDNYDFWFMGFVS 193

Query: 200 YQKSLRCLQQAI 211
           YQK+  CL++A+
Sbjct: 194 YQKAFNCLEKAL 205


>AT4G01600.1 | Symbols:  | GRAM domain family protein |
           chr4:693210-694319 FORWARD LENGTH=233
          Length = 233

 Score =  157 bits (396), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 69/163 (42%), Positives = 110/163 (67%), Gaps = 1/163 (0%)

Query: 53  RKADSFAHGVREHVRLGPKISDTVKGKLSLGARILQVGGVEKVFKQLFSIKDGEKLLKAS 112
           RKA++   G+++H++  P ISD    +LS G +++  GG E+VF++ F +   EKLL + 
Sbjct: 65  RKAEALVGGLKDHLKFSPSISDAAMARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDSF 124

Query: 113 QCYLSTTSGPIAGLLFISTHKVSFCSERSIKV-SSPKGEVIRVHYKVSIPLEKIKCVNQS 171
            CY+STTSGP+ G+++IS  +++FCS+ +I++ SS  G  +  +YKV +  EKI  ++ S
Sbjct: 125 VCYISTTSGPVTGVIYISNRRIAFCSDYAIRLPSSAGGNGVAAYYKVVMEWEKISSISSS 184

Query: 172 QNVKKPSEKYIELVTEDGFDFWLMGFFNYQKSLRCLQQAICQS 214
            NV KPSE+Y+ +VT DGF+FW MGF +Y  +  CL +A+  S
Sbjct: 185 TNVLKPSERYVHMVTRDGFEFWFMGFVSYIDAFNCLNKALLNS 227


>AT5G13200.1 | Symbols:  | GRAM domain family protein |
           chr5:4207081-4208079 FORWARD LENGTH=272
          Length = 272

 Score =  149 bits (376), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 103/164 (62%)

Query: 44  VLTRMNMLGRKADSFAHGVREHVRLGPKISDTVKGKLSLGARILQVGGVEKVFKQLFSIK 103
           V+   +   RKA++ A  +  +++ GP +S+T  GK++L A+ +  GG E +F+Q+F  +
Sbjct: 93  VIGMFHTWSRKAETVARNLWHNLKTGPSMSETAWGKVNLTAKAITKGGFESLFRQIFGTE 152

Query: 104 DGEKLLKASQCYLSTTSGPIAGLLFISTHKVSFCSERSIKVSSPKGEVIRVHYKVSIPLE 163
             E L K   CYLSTT+GP+AG +++S  +V+FCS+R +  ++P G+    +Y+V +PL 
Sbjct: 153 PNETLKKTFACYLSTTTGPVAGTVYLSNARVAFCSDRPLYFTAPSGQESWSYYRVVVPLA 212

Query: 164 KIKCVNQSQNVKKPSEKYIELVTEDGFDFWLMGFFNYQKSLRCL 207
            +  VN     + P EKYI+L T DG DFW MGF NY+K+   L
Sbjct: 213 NVATVNPVVVKETPPEKYIQLTTVDGHDFWFMGFVNYEKATHHL 256


>AT4G01600.2 | Symbols:  | GRAM domain family protein |
           chr4:693210-694319 FORWARD LENGTH=228
          Length = 228

 Score =  146 bits (369), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 109/176 (61%), Gaps = 3/176 (1%)

Query: 42  NSVLTRMNMLGRKADSFAHGVRE--HVRLGPKISDTVKGKLSLGARILQVGGVEKVFKQL 99
           + VL  +N  G+K +           V+  P ISD    +LS G +++  GG E+VF++ 
Sbjct: 47  DKVLEVLNRCGKKVEDATRKAEALVGVKFSPSISDAAMARLSQGTKMIVEGGPERVFQRE 106

Query: 100 FSIKDGEKLLKASQCYLSTTSGPIAGLLFISTHKVSFCSERSIKV-SSPKGEVIRVHYKV 158
           F +   EKLL +  CY+STTSGP+ G+++IS  +++FCS+ +I++ SS  G  +  +YKV
Sbjct: 107 FGVLAVEKLLDSFVCYISTTSGPVTGVIYISNRRIAFCSDYAIRLPSSAGGNGVAAYYKV 166

Query: 159 SIPLEKIKCVNQSQNVKKPSEKYIELVTEDGFDFWLMGFFNYQKSLRCLQQAICQS 214
            +  EKI  ++ S NV KPSE+Y+ +VT DGF+FW MGF +Y  +  CL +A+  S
Sbjct: 167 VMEWEKISSISSSTNVLKPSERYVHMVTRDGFEFWFMGFVSYIDAFNCLNKALLNS 222


>AT1G28200.1 | Symbols: FIP1 | FH interacting protein 1 |
           chr1:9850395-9852300 REVERSE LENGTH=259
          Length = 259

 Score =  139 bits (349), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 63/160 (39%), Positives = 104/160 (65%), Gaps = 3/160 (1%)

Query: 53  RKADSFAHGVREHVRLGPKISDTVKGKLSLGARILQVGGVEKVFKQLFSIKDGEKLLKAS 112
           +KA+  A    +H++ GP ++D    +++ G +IL  GG EKVFKQ F     EKLLK  
Sbjct: 97  KKAEDLAGNFWQHLKTGPSVADAAVSRIAQGTKILAEGGYEKVFKQTFDCLPDEKLLKTY 156

Query: 113 QCYLSTTSGPIAGLLFISTHKVSFCSERSIKVSSPKGE-VIRVHYKVSIPLEKIKCVNQS 171
            CYLST++GP+ G++++STHK++F S+  +  S  +GE  +  +YKV +P  ++K VN S
Sbjct: 157 ACYLSTSAGPVLGVMYLSTHKLAFSSDNPL--SYKEGEQTLWSYYKVVLPANQLKAVNPS 214

Query: 172 QNVKKPSEKYIELVTEDGFDFWLMGFFNYQKSLRCLQQAI 211
            +    S+KYI++++ D  +FW MGF  Y+ +++ LQ+A+
Sbjct: 215 TSRVNTSDKYIQVISIDNHEFWFMGFVTYESAVKSLQEAV 254


>AT2G22475.1 | Symbols: GEM | GRAM domain family protein |
           chr2:9541523-9544778 FORWARD LENGTH=299
          Length = 299

 Score =  137 bits (346), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 101/165 (61%), Gaps = 1/165 (0%)

Query: 47  RMNMLGRKADSFAHGVREHVRLGPKISDTVKGKLSLGARILQVGGVEKVFKQLFSIKDGE 106
           R+    +K +S A    +H+R  P  +D   G+++   ++   GG EK+F+Q F     E
Sbjct: 128 RVAEAAKKTESLAGNTWQHLRTAPSFADAAMGRIAQSTKVFAEGGYEKIFRQTFETDPEE 187

Query: 107 KLLKASQCYLSTTSGPIAGLLFISTHKVSFCSERSIKVSSPKGEVIRVHYKVSIPLEKIK 166
           +LL +  CYLST++GP+ G+L+IS+ K+++CS+  +   +   +    +YKV IPL ++K
Sbjct: 188 QLLNSFACYLSTSAGPVMGVLYISSAKLAYCSDNPLSYKN-GDQTEWSYYKVVIPLHQLK 246

Query: 167 CVNQSQNVKKPSEKYIELVTEDGFDFWLMGFFNYQKSLRCLQQAI 211
            VN S ++  P+EKYI++++ D  +FW MGF NY  ++  LQ ++
Sbjct: 247 AVNPSASIVNPAEKYIQVISVDNHEFWFMGFLNYDGAVTSLQDSL 291


>AT4G40100.1 | Symbols:  | GRAM domain family protein |
           chr4:18583244-18584524 FORWARD LENGTH=225
          Length = 225

 Score = 90.9 bits (224), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 35/170 (20%)

Query: 47  RMNMLGRKADSFAHGVREHVRLGPKISDTVKGKLSLGARILQVGGVEKVFKQLFSIKDGE 106
           R+     KA+S A    +H            G+++   ++L  GG EK+F+Q F     E
Sbjct: 87  RVGEAAMKAESLAGNTWQHPLRA------AMGRIAQSTKVLAEGGYEKIFRQTFETVPEE 140

Query: 107 KLLKASQCYLSTTSGPIAGLLFISTHKVSFCSERSIKVSSPKGEVIRVHYKVSIPLEKIK 166
           +L  +  CYLST++GP+ G+L+                             V IPL ++K
Sbjct: 141 QLQNSFACYLSTSAGPVMGVLY-----------------------------VVIPLHQLK 171

Query: 167 CVNQSQNVKKPSEKYIELVTEDGFDFWLMGFFNYQKSLRCLQQAICQSSS 216
            VN S +   P+EKYI++++ D  +FW MGF NY+ ++  LQ  +   +S
Sbjct: 172 SVNPSISTVNPAEKYIQVISVDDHEFWFMGFLNYEGAVTSLQDTLQAGAS 221


>AT2G22475.2 | Symbols: GEM | GRAM domain family protein |
           chr2:9541523-9544242 FORWARD LENGTH=248
          Length = 248

 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 59/96 (61%)

Query: 47  RMNMLGRKADSFAHGVREHVRLGPKISDTVKGKLSLGARILQVGGVEKVFKQLFSIKDGE 106
           R+    +K +S A    +H+R  P  +D   G+++   ++   GG EK+F+Q F     E
Sbjct: 128 RVAEAAKKTESLAGNTWQHLRTAPSFADAAMGRIAQSTKVFAEGGYEKIFRQTFETDPEE 187

Query: 107 KLLKASQCYLSTTSGPIAGLLFISTHKVSFCSERSI 142
           +LL +  CYLST++GP+ G+L+IS+ K+++CS+  +
Sbjct: 188 QLLNSFACYLSTSAGPVMGVLYISSAKLAYCSDNPL 223