Miyakogusa Predicted Gene
- Lj5g3v2259690.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2259690.2 Non Chatacterized Hit- tr|I1NF47|I1NF47_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,87.5,0,SUBFAMILY NOT
NAMED,NULL; RING ZINC FINGER PROTEIN,NULL; Ring finger,Zinc finger,
RING-type; seg,NUL,CUFF.57117.2
(157 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G64920.1 | Symbols: CIP8 | COP1-interacting protein 8 | chr5:... 179 1e-45
AT5G01980.1 | Symbols: | RING/U-box superfamily protein | chr5:... 119 9e-28
AT3G19950.1 | Symbols: | RING/U-box superfamily protein | chr3:... 115 1e-26
AT5G08139.1 | Symbols: | RING/U-box superfamily protein | chr5:... 112 8e-26
AT5G15820.1 | Symbols: | RING/U-box superfamily protein | chr5:... 108 1e-24
AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 108 1e-24
AT3G13430.3 | Symbols: | RING/U-box superfamily protein | chr3:... 108 2e-24
AT3G13430.2 | Symbols: | RING/U-box superfamily protein | chr3:... 108 2e-24
AT3G13430.1 | Symbols: | RING/U-box superfamily protein | chr3:... 108 2e-24
AT5G60820.1 | Symbols: | RING/U-box superfamily protein | chr5:... 107 4e-24
AT1G55530.1 | Symbols: | RING/U-box superfamily protein | chr1:... 107 4e-24
AT3G02340.1 | Symbols: | RING/U-box superfamily protein | chr3:... 105 1e-23
AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |... 102 9e-23
AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 102 1e-22
AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 101 2e-22
AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 101 2e-22
AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 101 2e-22
AT4G26400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 96 1e-20
AT4G26400.2 | Symbols: | RING/U-box superfamily protein | chr4:... 96 1e-20
AT3G56580.3 | Symbols: | RING/U-box superfamily protein | chr3:... 94 3e-20
AT3G56580.1 | Symbols: | RING/U-box superfamily protein | chr3:... 94 3e-20
AT3G56580.2 | Symbols: | RING/U-box superfamily protein | chr3:... 94 3e-20
AT1G60360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 91 2e-19
AT2G39720.1 | Symbols: RHC2A | RING-H2 finger C2A | chr2:1656750... 89 1e-18
AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein | c... 89 2e-18
AT3G60080.1 | Symbols: | RING/U-box superfamily protein | chr3:... 87 4e-18
AT3G10815.1 | Symbols: | RING/U-box superfamily protein | chr3:... 86 1e-17
AT2G44330.1 | Symbols: | RING/U-box superfamily protein | chr2:... 84 3e-17
AT1G68180.1 | Symbols: | RING/U-box superfamily protein | chr1:... 84 5e-17
AT1G26800.1 | Symbols: | RING/U-box superfamily protein | chr1:... 78 2e-15
AT5G02750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 75 1e-14
AT1G14200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 71 3e-13
AT2G29840.1 | Symbols: | RING/U-box superfamily protein | chr2:... 68 3e-12
AT3G30460.1 | Symbols: | RING/U-box superfamily protein | chr3:... 67 5e-12
AT1G18760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 65 2e-11
AT1G04790.1 | Symbols: | RING/U-box superfamily protein | chr1:... 64 5e-11
AT1G18770.1 | Symbols: | RING/U-box superfamily protein | chr1:... 64 6e-11
AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein | ... 63 1e-10
AT5G53910.1 | Symbols: | RING/U-box superfamily protein | chr5:... 58 2e-09
AT3G58720.1 | Symbols: | RING/U-box superfamily protein | chr3:... 58 3e-09
AT3G58720.2 | Symbols: | RING/U-box superfamily protein | chr3:... 58 3e-09
AT1G21960.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 4e-09
AT3G13228.1 | Symbols: | RING/U-box superfamily protein | chr3:... 57 4e-09
AT5G67120.1 | Symbols: | RING/U-box superfamily protein | chr5:... 57 5e-09
AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 57 6e-09
AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 57 6e-09
AT1G73760.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 7e-09
AT2G03000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 56 8e-09
AT3G14970.1 | Symbols: | RING/U-box superfamily protein | chr3:... 56 1e-08
AT1G18780.1 | Symbols: | RING/U-box superfamily protein | chr1:... 56 1e-08
AT1G35630.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 55 2e-08
AT1G74620.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 2e-08
AT1G35625.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 3e-08
AT4G40070.1 | Symbols: | RING/U-box superfamily protein | chr4:... 55 3e-08
AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 54 4e-08
AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 54 5e-08
AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A | chr2:7576640... 53 7e-08
AT2G15580.1 | Symbols: | RING/U-box superfamily protein | chr2:... 53 7e-08
AT1G65040.2 | Symbols: | RING/U-box superfamily protein | chr1:... 53 8e-08
AT1G35330.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 8e-08
AT1G65040.3 | Symbols: | RING/U-box superfamily protein | chr1:... 53 9e-08
AT1G65040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 1e-07
AT5G66070.2 | Symbols: | RING/U-box superfamily protein | chr5:... 52 2e-07
AT4G35840.1 | Symbols: | RING/U-box superfamily protein | chr4:... 52 2e-07
AT5G66070.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 2e-07
AT2G42350.1 | Symbols: | RING/U-box superfamily protein | chr2:... 51 3e-07
AT4G10160.1 | Symbols: | RING/U-box superfamily protein | chr4:... 51 3e-07
AT5G54990.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 3e-07
AT5G07225.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 3e-07
AT5G42940.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 4e-07
AT1G23980.1 | Symbols: | RING/U-box superfamily protein | chr1:... 51 4e-07
AT2G27940.1 | Symbols: | RING/U-box superfamily protein | chr2:... 51 4e-07
AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein | c... 50 4e-07
AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 | chr3:1771336... 50 4e-07
AT3G15740.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 5e-07
AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 | chr2:7... 50 5e-07
AT5G24870.2 | Symbols: | RING/U-box superfamily protein | chr5:... 50 6e-07
AT5G24870.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 6e-07
AT1G53190.2 | Symbols: | RING/U-box superfamily protein | chr1:... 50 6e-07
AT1G53190.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 6e-07
AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 50 6e-07
AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein | ... 50 6e-07
AT4G10150.1 | Symbols: | RING/U-box superfamily protein | chr4:... 50 7e-07
AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 | chr3:... 50 7e-07
AT1G70910.1 | Symbols: DEP | RING/U-box superfamily protein | ch... 50 7e-07
AT3G20395.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 8e-07
AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogene... 50 9e-07
AT2G44578.1 | Symbols: | RING/U-box superfamily protein | chr2:... 50 9e-07
AT1G17970.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 1e-06
AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region t... 49 1e-06
AT3G60966.1 | Symbols: | RING/U-box superfamily protein | chr3:... 49 1e-06
AT5G66160.2 | Symbols: RMR1 | receptor homology region transmemb... 49 1e-06
AT1G45180.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 2e-06
AT4G31450.1 | Symbols: | RING/U-box superfamily protein | chr4:... 49 2e-06
AT2G42360.1 | Symbols: | RING/U-box superfamily protein | chr2:... 49 2e-06
AT2G37150.3 | Symbols: | RING/U-box superfamily protein | chr2:... 49 2e-06
AT4G09120.1 | Symbols: | RING/U-box superfamily protein | chr4:... 49 2e-06
AT1G33480.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 2e-06
AT5G58580.1 | Symbols: ATL63, TL63 | TOXICOS EN LEVADURA 63 | ch... 49 2e-06
AT5G47610.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 2e-06
AT2G44581.1 | Symbols: | RING/U-box superfamily protein | chr2:... 49 2e-06
AT1G53820.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 2e-06
AT4G09110.1 | Symbols: | RING/U-box superfamily protein | chr4:... 49 2e-06
AT2G15530.4 | Symbols: | RING/U-box superfamily protein | chr2:... 48 2e-06
AT2G37150.2 | Symbols: | RING/U-box superfamily protein | chr2:... 48 2e-06
AT2G37150.1 | Symbols: | RING/U-box superfamily protein | chr2:... 48 2e-06
AT4G09130.1 | Symbols: | RING/U-box superfamily protein | chr4:... 48 3e-06
AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein | c... 48 3e-06
AT1G20823.1 | Symbols: | RING/U-box superfamily protein | chr1:... 48 3e-06
AT5G10650.2 | Symbols: | RING/U-box superfamily protein | chr5:... 48 3e-06
AT5G10650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 48 3e-06
AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B | chr4:1685223... 48 3e-06
AT4G12140.1 | Symbols: | RING/U-box superfamily protein | chr4:... 48 3e-06
AT4G12210.1 | Symbols: | RING/U-box superfamily protein | chr4:... 47 4e-06
AT1G49230.1 | Symbols: | RING/U-box superfamily protein | chr1:... 47 5e-06
AT2G15530.3 | Symbols: | RING/U-box superfamily protein | chr2:... 47 5e-06
AT2G15530.2 | Symbols: | RING/U-box superfamily protein | chr2:... 47 5e-06
AT2G15530.1 | Symbols: | RING/U-box superfamily protein | chr2:... 47 5e-06
AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVE... 47 6e-06
AT4G05350.1 | Symbols: | RING/U-box superfamily protein | chr4:... 47 7e-06
AT4G34040.1 | Symbols: | RING/U-box superfamily protein | chr4:... 47 7e-06
AT4G12190.1 | Symbols: | RING/U-box superfamily protein | chr4:... 47 7e-06
AT5G36001.1 | Symbols: | RING/U-box superfamily protein | chr5:... 47 7e-06
AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 47 8e-06
AT5G53110.1 | Symbols: | RING/U-box superfamily protein | chr5:... 47 8e-06
AT2G18670.1 | Symbols: | RING/U-box superfamily protein | chr2:... 47 8e-06
AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 46 8e-06
AT1G80400.1 | Symbols: | RING/U-box superfamily protein | chr1:... 46 9e-06
AT5G45290.2 | Symbols: | RING/U-box superfamily protein | chr5:... 46 9e-06
AT2G25410.1 | Symbols: | RING/U-box superfamily protein | chr2:... 46 9e-06
>AT5G64920.1 | Symbols: CIP8 | COP1-interacting protein 8 |
chr5:25944338-25945342 REVERSE LENGTH=334
Length = 334
Score = 179 bits (453), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 112/144 (77%), Gaps = 9/144 (6%)
Query: 2 RNRILDWADILMGMEDNSIEFRLQVPESDRYVGNPEDYVD-ATEYEALMQILAESDGGGR 60
RNRILDWA+ILMG+EDNSIEFR+ ESDRY GNP DY+D A YEAL+Q LAE DGGG
Sbjct: 168 RNRILDWAEILMGIEDNSIEFRM---ESDRYAGNPADYIDDAAGYEALLQNLAEGDGGGG 224
Query: 61 KG---APPASKAAVEALPTVKIMSESD--TVACAICKDLMGVGESAKRLPCGHQYHGDCI 115
G APPA+K+A+EAL T ++ S + CA+CKD M +GE+ K+LPCGH YHGDCI
Sbjct: 225 GGRRGAPPAAKSAIEALETFEVSSSEGEMVMVCAVCKDGMVMGETGKKLPCGHCYHGDCI 284
Query: 116 VPWLSSRNSCPVCRFQLPTDDKEF 139
VPWL +RNSCPVCRFQL TDD E+
Sbjct: 285 VPWLGTRNSCPVCRFQLETDDAEY 308
>AT5G01980.1 | Symbols: | RING/U-box superfamily protein |
chr5:375542-377023 FORWARD LENGTH=493
Length = 493
Score = 119 bits (298), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 82/132 (62%), Gaps = 12/132 (9%)
Query: 10 DILMGMEDNSIEFRLQVPESDRYVGNPEDYVDATEYEALMQILAESDGGGRKGAPPASKA 69
+I G+ED ++F Y N DY+D ++ L++ LAESD R+GAPPAS +
Sbjct: 280 NIFTGLED--LDF-------SPYAANVGDYLDERGFDELLEQLAESDNS-RRGAPPASVS 329
Query: 70 AVEALPTVKIMSES--DTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPV 127
V LP V I E + CAICK+L + +LPC H YH CIVPWLS+RNSCP+
Sbjct: 330 CVRNLPRVIIAEEHVMKGLVCAICKELFSLRNETTQLPCLHLYHAHCIVPWLSARNSCPL 389
Query: 128 CRFQLPTDDKEF 139
CR++LPTDDK++
Sbjct: 390 CRYELPTDDKDY 401
>AT3G19950.1 | Symbols: | RING/U-box superfamily protein |
chr3:6942853-6943839 FORWARD LENGTH=328
Length = 328
Score = 115 bits (288), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 79/126 (62%), Gaps = 7/126 (5%)
Query: 20 IEFRLQVPESD---RYVGNPEDYVDATEYEALMQILAESDGGGRKGAPPASKAAVEALPT 76
EF ++ SD R GN DY E L+Q LAE+D R G PPASK+A++ALPT
Sbjct: 143 FEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPN-RYGTPPASKSAIDALPT 201
Query: 77 VKI---MSESDTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQLP 133
VK+ M +S+ CA+C D G K++PC H +H DC++PWL NSCPVCRF+LP
Sbjct: 202 VKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELP 261
Query: 134 TDDKEF 139
TDD ++
Sbjct: 262 TDDPDY 267
>AT5G08139.1 | Symbols: | RING/U-box superfamily protein |
chr5:2616487-2617617 FORWARD LENGTH=376
Length = 376
Score = 112 bits (281), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 81/127 (63%), Gaps = 7/127 (5%)
Query: 17 DNSIEFRLQVPESDRYVG-NPEDYVDATEYEALMQILAESDGGGRKGAPPASKAAVEALP 75
++++E V + Y+G + +DYV +Y+ L + A+++ G PP SK+ + LP
Sbjct: 237 NHTLEINFDVDNRELYIGGDHDDYV--QDYDMLFEQFADAEVS-VIGLPPTSKSFLNNLP 293
Query: 76 TVKIMSESDT---VACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQL 132
V + E+D + CA+CKD M +G A +LPC H+YH +CIVPWL RN+CPVCR++L
Sbjct: 294 VVLLEGENDDDGGLVCAVCKDEMNIGNKAVQLPCNHKYHSECIVPWLKVRNTCPVCRYEL 353
Query: 133 PTDDKEF 139
PTDD E+
Sbjct: 354 PTDDAEY 360
>AT5G15820.1 | Symbols: | RING/U-box superfamily protein |
chr5:5161787-5162833 FORWARD LENGTH=348
Length = 348
Score = 108 bits (271), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 69/99 (69%), Gaps = 4/99 (4%)
Query: 44 EYEALMQILAESDGGGRKGAPPASKAAVEALPTVKIMSE---SDTVACAICKDLMGVGES 100
+Y A++ + +++ G KG PPASK+ V+ LP V++ E S ++ CAICKD + E
Sbjct: 245 DYNAIIGQMFDNETG-IKGTPPASKSVVDGLPDVELTIEELSSVSIVCAICKDEVVFKEK 303
Query: 101 AKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQLPTDDKEF 139
KRLPC H YHG+CI+PWL RN+CPVCR +LPTDD E+
Sbjct: 304 VKRLPCKHYYHGECIIPWLGIRNTCPVCRHELPTDDLEY 342
>AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:17178837-17180024 REVERSE
LENGTH=395
Length = 395
Score = 108 bits (270), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 66/93 (70%), Gaps = 4/93 (4%)
Query: 46 EALMQILAESDGGGRKGAPPASKAAVEALPTVKIMSESDTVA---CAICKDLMGVGESAK 102
E L QI A +G GR G PPASK+A+E+LP V+I S+ T A CA+C ++ G +
Sbjct: 171 EQLSQIEASGNGIGRSGNPPASKSAIESLPRVEI-SDCHTKAEANCAVCTEVFEAGIEGR 229
Query: 103 RLPCGHQYHGDCIVPWLSSRNSCPVCRFQLPTD 135
+PC H +HGDCIVPWLS RNSCPVCRF+LP+D
Sbjct: 230 EMPCKHIFHGDCIVPWLSIRNSCPVCRFELPSD 262
>AT3G13430.3 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
Query: 34 GNPEDYVDATEYEALMQILAESDGGGRKGAPPASKAAVEALPTVKIMSESDTVACAICKD 93
G+ DY +E L+Q LAE+D R G PPA+K AVEAL VKI E + C++C D
Sbjct: 173 GSLGDYFIGPGFETLLQRLAENDLNNRYGTPPATKEAVEALAMVKI--EDSLLQCSVCLD 230
Query: 94 LMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQLPTDDKE 138
+G AK +PC H++H DC++PWL +SCPVCR+ LPT D +
Sbjct: 231 DFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLPTGDDD 275
>AT3G13430.2 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
Query: 34 GNPEDYVDATEYEALMQILAESDGGGRKGAPPASKAAVEALPTVKIMSESDTVACAICKD 93
G+ DY +E L+Q LAE+D R G PPA+K AVEAL VKI E + C++C D
Sbjct: 173 GSLGDYFIGPGFETLLQRLAENDLNNRYGTPPATKEAVEALAMVKI--EDSLLQCSVCLD 230
Query: 94 LMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQLPTDDKE 138
+G AK +PC H++H DC++PWL +SCPVCR+ LPT D +
Sbjct: 231 DFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLPTGDDD 275
>AT3G13430.1 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
Query: 34 GNPEDYVDATEYEALMQILAESDGGGRKGAPPASKAAVEALPTVKIMSESDTVACAICKD 93
G+ DY +E L+Q LAE+D R G PPA+K AVEAL VKI E + C++C D
Sbjct: 173 GSLGDYFIGPGFETLLQRLAENDLNNRYGTPPATKEAVEALAMVKI--EDSLLQCSVCLD 230
Query: 94 LMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQLPTDDKE 138
+G AK +PC H++H DC++PWL +SCPVCR+ LPT D +
Sbjct: 231 DFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLPTGDDD 275
>AT5G60820.1 | Symbols: | RING/U-box superfamily protein |
chr5:24469636-24470895 FORWARD LENGTH=419
Length = 419
Score = 107 bits (266), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 78/132 (59%), Gaps = 19/132 (14%)
Query: 19 SIEFRLQVPESDR--YVGNP-------EDYVDATEYEALMQILAESDGGGRKGAPPASKA 69
S+EF L ES+ Y+G+ EDY+ TEYE L + AE G G PPASK+
Sbjct: 292 SLEFNLDDAESNLELYIGDIDHEEEDYEDYLHTTEYEMLFE--AEISSG--IGKPPASKS 347
Query: 70 AVEALPTVKIMSES------DTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRN 123
++ L + +E D V CA+CK+ M VG+ LPC H+YH +CIVPWL RN
Sbjct: 348 FIKNLKVSPLSNEDVMENDDDAVCCAVCKEEMIVGKEVAELPCRHKYHSECIVPWLGIRN 407
Query: 124 SCPVCRFQLPTD 135
+CPVCRF+LP+D
Sbjct: 408 TCPVCRFELPSD 419
>AT1G55530.1 | Symbols: | RING/U-box superfamily protein |
chr1:20729472-20730527 REVERSE LENGTH=351
Length = 351
Score = 107 bits (266), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 75/126 (59%), Gaps = 4/126 (3%)
Query: 11 ILMGMEDNSIEFRLQVPESDRYVGNPEDYVDATEYEALMQILAESDGGGRKGAPPASKAA 70
IL+ + +I + G+ DY +E L+Q LAE+D R G PPA K A
Sbjct: 150 ILINTSNQTITVQNSADMDSVPAGSLGDYFIGPGFEMLLQRLAENDPN-RYGTPPAKKEA 208
Query: 71 VEALPTVKIMSESDTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRF 130
VEAL TVKI +T+ C++C D +G AK +PC H++H DC++PWL +SCPVCR+
Sbjct: 209 VEALATVKI---EETLQCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRY 265
Query: 131 QLPTDD 136
QLP D+
Sbjct: 266 QLPADE 271
>AT3G02340.1 | Symbols: | RING/U-box superfamily protein |
chr3:477032-478261 FORWARD LENGTH=409
Length = 409
Score = 105 bits (262), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 81/132 (61%), Gaps = 7/132 (5%)
Query: 11 ILMGMEDNSIEFRLQVPESDRYVGNPEDYVDATEYEALMQILAESDGGGRKGAPPASKAA 70
I++ +D ++ L + D + N + DA +A++ + + D G +G PPA+K+
Sbjct: 259 IMLNPDDIDPDYYLYLSGLDEFDENHSGHYDA---DAILGQMFD-DETGIRGNPPAAKSV 314
Query: 71 VEALPTVKIMSE---SDTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPV 127
++ LP V++ E CA+CKD M V E +RLPC H YHG+CI+PWL RN+CPV
Sbjct: 315 IQDLPVVELAVEELDKGNNVCAVCKDEMLVEEKVRRLPCSHFYHGECIIPWLGIRNTCPV 374
Query: 128 CRFQLPTDDKEF 139
CR++LPTDD E+
Sbjct: 375 CRYELPTDDLEY 386
>AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |
chr5:22818254-22819444 FORWARD LENGTH=396
Length = 396
Score = 102 bits (255), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 67/104 (64%), Gaps = 7/104 (6%)
Query: 38 DYVDATEYEALMQILAESDGGGRKGAPPASKAAVEALPTVKIMSESDTVACAICKDLMGV 97
DY + L+Q LAE+D R+G PPA K AVEALPTVKIM + + C++C D
Sbjct: 213 DYFIGPGLDLLLQHLAENDPN-RQGTPPARKEAVEALPTVKIM---EPLQCSVCLDDFEK 268
Query: 98 GESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQLPT---DDKE 138
G AK +PC H++H CIVPWL +SCPVCRF+LP+ DD E
Sbjct: 269 GTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFELPSSADDDDE 312
>AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:23998422-23999645 REVERSE
LENGTH=407
Length = 407
Score = 102 bits (253), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 65/95 (68%), Gaps = 8/95 (8%)
Query: 46 EALMQILAESDGGGRKGAPPASKAAVEALPTVKIM-----SESDTVACAICKDLMGVGES 100
E L QI A + G GR G PPASK+A+E+LP V+I SE++ CA+C ++
Sbjct: 155 EQLSQIEASATGIGRSGNPPASKSAIESLPRVEISDCHIGSEAN---CAVCTEIFETETE 211
Query: 101 AKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQLPTD 135
A+ +PC H +H DCIVPWLS RNSCPVCRF+LP++
Sbjct: 212 AREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSE 246
>AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 101 bits (252), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 70/123 (56%), Gaps = 7/123 (5%)
Query: 17 DNSIE--FRLQVPESDRYVGNPEDYVDATEYEALMQILAESDGGGRKGAPPASKAAVEAL 74
DN++E F P GN DY E L + L S G R+G PPA ++A++AL
Sbjct: 116 DNAVEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQL--SAGTTRRGPPPAPRSAIDAL 173
Query: 75 PTVKIMSE---SDTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQ 131
PT+KI S C +CKD +G AK++PC H YH DCIVPWL NSCPVCR +
Sbjct: 174 PTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQE 233
Query: 132 LPT 134
LP+
Sbjct: 234 LPS 236
>AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 101 bits (252), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 70/123 (56%), Gaps = 7/123 (5%)
Query: 17 DNSIE--FRLQVPESDRYVGNPEDYVDATEYEALMQILAESDGGGRKGAPPASKAAVEAL 74
DN++E F P GN DY E L + L S G R+G PPA ++A++AL
Sbjct: 116 DNAVEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQL--SAGTTRRGPPPAPRSAIDAL 173
Query: 75 PTVKIMSE---SDTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQ 131
PT+KI S C +CKD +G AK++PC H YH DCIVPWL NSCPVCR +
Sbjct: 174 PTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQE 233
Query: 132 LPT 134
LP+
Sbjct: 234 LPS 236
>AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 101 bits (252), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 70/123 (56%), Gaps = 7/123 (5%)
Query: 17 DNSIE--FRLQVPESDRYVGNPEDYVDATEYEALMQILAESDGGGRKGAPPASKAAVEAL 74
DN++E F P GN DY E L + L S G R+G PPA ++A++AL
Sbjct: 116 DNAVEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQL--SAGTTRRGPPPAPRSAIDAL 173
Query: 75 PTVKIMSE---SDTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQ 131
PT+KI S C +CKD +G AK++PC H YH DCIVPWL NSCPVCR +
Sbjct: 174 PTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQE 233
Query: 132 LPT 134
LP+
Sbjct: 234 LPS 236
>AT4G26400.1 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Query: 38 DYVDATEYEALMQILAESDGGGRKGAPPASKAAVEALPTVKIMSESDTVACAICKDLMGV 97
DY + + L++ LA++D R G+ PA K V+ LPTVKI S+++ C+IC D
Sbjct: 195 DYFVGSSLDHLLEHLADNDSI-RHGSLPARKEVVDNLPTVKI---SESLQCSICLDDFDK 250
Query: 98 GESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQLPTDDK 137
G AK +PC H++H CIVPWL +SCPVCR++LP DD+
Sbjct: 251 GSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYELPPDDE 290
>AT4G26400.2 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Query: 38 DYVDATEYEALMQILAESDGGGRKGAPPASKAAVEALPTVKIMSESDTVACAICKDLMGV 97
DY + + L++ LA++D R G+ PA K V+ LPTVKI S+++ C+IC D
Sbjct: 195 DYFVGSSLDHLLEHLADNDSI-RHGSLPARKEVVDNLPTVKI---SESLQCSICLDDFDK 250
Query: 98 GESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQLPTDDK 137
G AK +PC H++H CIVPWL +SCPVCR++LP DD+
Sbjct: 251 GSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYELPPDDE 290
>AT3G56580.3 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
Query: 35 NPEDYVDATEYEALMQILAESDGGGRKGAPPASKAAVEALPTVKIMSE---SDTVACAIC 91
N DY E L++ L S G +G PPA K++++ALPT+KI + S C +C
Sbjct: 132 NAGDYFFGPGLEELIEQL--SSGTHHRGPPPAPKSSIDALPTIKITQKHLKSSDSHCPVC 189
Query: 92 KDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQLP 133
KD + AK++PC H YH DCIVPWL NSCPVCR +LP
Sbjct: 190 KDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELP 231
>AT3G56580.1 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
Query: 35 NPEDYVDATEYEALMQILAESDGGGRKGAPPASKAAVEALPTVKIMSE---SDTVACAIC 91
N DY E L++ L S G +G PPA K++++ALPT+KI + S C +C
Sbjct: 132 NAGDYFFGPGLEELIEQL--SSGTHHRGPPPAPKSSIDALPTIKITQKHLKSSDSHCPVC 189
Query: 92 KDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQLP 133
KD + AK++PC H YH DCIVPWL NSCPVCR +LP
Sbjct: 190 KDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELP 231
>AT3G56580.2 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
Query: 35 NPEDYVDATEYEALMQILAESDGGGRKGAPPASKAAVEALPTVKIMSE---SDTVACAIC 91
N DY E L++ L S G +G PPA K++++ALPT+KI + S C +C
Sbjct: 132 NAGDYFFGPGLEELIEQL--SSGTHHRGPPPAPKSSIDALPTIKITQKHLKSSDSHCPVC 189
Query: 92 KDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQLP 133
KD + AK++PC H YH DCIVPWL NSCPVCR +LP
Sbjct: 190 KDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELP 231
>AT1G60360.1 | Symbols: | RING/U-box superfamily protein |
chr1:22242748-22243731 REVERSE LENGTH=327
Length = 327
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 62/106 (58%), Gaps = 6/106 (5%)
Query: 31 RYVGNPEDYVDATEYEALMQILAESDGGGRKGAPPASKAAVEALPTVKIMSE---SDTVA 87
R+V + + + A+ E L++ L + D R G PPAS+ + +LP+VKI + +D
Sbjct: 167 RHVNSHDYFTGASSLEQLIEQLTQDD---RPGPPPASEPTINSLPSVKITPQHLTNDMSQ 223
Query: 88 CAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQLP 133
C +C + VG A LPC H YH DCIVPWL NSCP+CR LP
Sbjct: 224 CTVCMEEFIVGGDATELPCKHIYHKDCIVPWLRLNNSCPICRRDLP 269
>AT2G39720.1 | Symbols: RHC2A | RING-H2 finger C2A |
chr2:16567506-16568711 REVERSE LENGTH=401
Length = 401
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 57/78 (73%), Gaps = 6/78 (7%)
Query: 64 PPASKAAVEALPTVKI-----MSESDTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPW 118
PPASK+A+EALP ++I +S+S + CA+CK+ + SA+ +PC H YH DCI+PW
Sbjct: 173 PPASKSAIEALPLIEIDPTHLLSDSQS-HCAVCKENFVLKSSAREMPCNHIYHPDCILPW 231
Query: 119 LSSRNSCPVCRFQLPTDD 136
L+ RNSCPVCR +LP +D
Sbjct: 232 LAIRNSCPVCRHELPAED 249
>AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein |
chr5:7092663-7094310 REVERSE LENGTH=310
Length = 310
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 56 DGGGRKGAPPASKAAVEALPTVKIMSE-----SDTVACAICKDLMGVGESAKRLPCGHQY 110
D GG APPASK VE LP + E C ICK+ + +G+ + LPC H +
Sbjct: 193 DDGGPPRAPPASKEVVEKLPVIIFTEELLKKFGAEAECCICKENLVIGDKMQELPCKHTF 252
Query: 111 HGDCIVPWLSSRNSCPVCRFQLPTDDKEF 139
H C+ PWL NSCP+CR +LPTDD+++
Sbjct: 253 HPPCLKPWLDEHNSCPICRHELPTDDQKY 281
>AT3G60080.1 | Symbols: | RING/U-box superfamily protein |
chr3:22187635-22188555 FORWARD LENGTH=306
Length = 306
Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 54/77 (70%), Gaps = 10/77 (12%)
Query: 71 VEALPTVKIMS-------ESD---TVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLS 120
++++PT++I S +SD + CA+CK+ +GESA+RLPC H YH DCIVPWLS
Sbjct: 142 IDSIPTIQISSSLLCSTDDSDPDSVLLCAVCKEDFIIGESARRLPCSHIYHSDCIVPWLS 201
Query: 121 SRNSCPVCRFQLPTDDK 137
NSCP+CRF+LPT K
Sbjct: 202 DHNSCPLCRFELPTTAK 218
>AT3G10815.1 | Symbols: | RING/U-box superfamily protein |
chr3:3385009-3385608 REVERSE LENGTH=199
Length = 199
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 60 RKGAPPASKAAVEALPTVKIMSESDTV--ACAICKDLMGVGESAKRLPCGHQYHGDCIVP 117
R+G PPAS AA+ +L +KI + + C +C+D +G A+++PC H YH +CI+P
Sbjct: 91 RRGPPPASLAAINSLQKIKIRQKHLGLDPYCPVCQDQFEIGSDARKMPCKHIYHSECILP 150
Query: 118 WLSSRNSCPVCRFQLPTD 135
WL RN+CPVCR +LP D
Sbjct: 151 WLVQRNTCPVCRKELPQD 168
>AT2G44330.1 | Symbols: | RING/U-box superfamily protein |
chr2:18310621-18311163 FORWARD LENGTH=180
Length = 180
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 8/76 (10%)
Query: 71 VEALPTVKIMSESDTVA--------CAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSR 122
+E+LPT+KI S + A CAIC++ VGESA+RLPC H YH DCI+PWL+S
Sbjct: 71 MESLPTIKISSSMLSSASSDDSALPCAICREDFVVGESARRLPCNHLYHNDCIIPWLTSH 130
Query: 123 NSCPVCRFQLPTDDKE 138
NSCP+CR +LP E
Sbjct: 131 NSCPLCRVELPVASSE 146
>AT1G68180.1 | Symbols: | RING/U-box superfamily protein |
chr1:25554816-25555562 FORWARD LENGTH=248
Length = 248
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 66/109 (60%), Gaps = 11/109 (10%)
Query: 27 PESDRYVGNPEDYVDATEYEALMQILAESDGGGRKGAPPASKAAVEALPTVKIMSESDTV 86
P S+R+ N +D V T+ E A+ + G PPAS++A+EA+ TV I+++ D V
Sbjct: 82 PRSNRF--NHDDLVYNTDEE-----FADVMPSVQIGPPPASQSAIEAVRTV-IITDEDLV 133
Query: 87 ---ACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQL 132
CAICK+ VGE K L C H YH CIV WL+ N+CP+CRF++
Sbjct: 134 KEKVCAICKEEFEVGEEGKELKCLHLYHSSCIVSWLNIHNTCPICRFEV 182
>AT1G26800.1 | Symbols: | RING/U-box superfamily protein |
chr1:9285576-9286190 REVERSE LENGTH=204
Length = 204
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Query: 48 LMQILAESDGGGRKGAPPASKAAVEALPTVKIMSESDTVACAICKDLMGVGESAKRLPCG 107
L++ L ES GR PPASKA+++A+P V+I + C IC + E+ K +PC
Sbjct: 78 LLRSLLESREEGR---PPASKASIDAMPIVEI--DGCEGECVICLEEWKSEETVKEMPCK 132
Query: 108 HQYHGDCIVPWLSSRNSCPVCRFQLPTDDKEF 139
H++HG CI WL SCPVCR+++P D E
Sbjct: 133 HRFHGGCIEKWLGFHGSCPVCRYEMPVDGDEI 164
>AT5G02750.1 | Symbols: | RING/U-box superfamily protein |
chr5:620101-620952 FORWARD LENGTH=283
Length = 283
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%)
Query: 81 SESDTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQLPTDD 136
S + V C ICK+ M G +PC H +H CI+PWLS +N+CP CRFQLPTDD
Sbjct: 207 SNAGEVECVICKEEMSEGRDVCEMPCQHFFHWKCILPWLSKKNTCPFCRFQLPTDD 262
>AT1G14200.1 | Symbols: | RING/U-box superfamily protein |
chr1:4854532-4855071 REVERSE LENGTH=179
Length = 179
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 58 GGRKGAPPASKAAVEALPTVKIMSESDTV--ACAICKDLMGVGESAKRLPCGHQYHGDCI 115
GG++G PA K+ VE +P V I + + +CAIC D G+ A +PC H++H C+
Sbjct: 77 GGKQGRSPALKSEVENMPRVVIGEDKEKYGGSCAICLDEWSKGDVAAEMPCKHKFHSKCV 136
Query: 116 VPWLSSRNSCPVCRFQLP 133
WL +CP+CR+++P
Sbjct: 137 EEWLGRHATCPMCRYEMP 154
>AT2G29840.1 | Symbols: | RING/U-box superfamily protein |
chr2:12732387-12733983 REVERSE LENGTH=293
Length = 293
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 44 EYEALMQILAESDGGGRKGAPPASKAAVEALPTVKIMSESDTVA----CAICKDLMGVGE 99
++E ++Q R PASK AVE+L SD V C+IC + G
Sbjct: 198 QFEQVLQASFNETNTAR--LKPASKLAVESLNRKTYKKASDVVGENEMCSICLEEFDDGR 255
Query: 100 SAKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQLPTDDK 137
S LPCGH++ +C + W + + CP+CRF+LP +D+
Sbjct: 256 SIVALPCGHEFDDECALKWFETNHDCPLCRFKLPCEDQ 293
>AT3G30460.1 | Symbols: | RING/U-box superfamily protein |
chr3:12104433-12104876 FORWARD LENGTH=147
Length = 147
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 70 AVEALPTVKI----MSESDTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSC 125
A E LP V+ M E V CAIC++ + E LPC H YH +CI WLS+RN+C
Sbjct: 75 AGEELPVVEFTAEEMMERGLVVCAICREELAANERLSELPCRHYYHKECISNWLSNRNTC 134
Query: 126 PVCRFQL 132
P+CR +
Sbjct: 135 PLCRHNV 141
>AT1G18760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:6471150-6471824 REVERSE LENGTH=224
Length = 224
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 46 EALMQILAESDGGGRKGAPPASKAAVEALP-TVKIMSESDTVACAICKDLMGVGESAKRL 104
EA+ L E++ + PA+K V +L + + S T C IC + G L
Sbjct: 135 EAVRASLEETNNISLR---PANKLVVNSLARKIYKKTTSSTERCTICLEEFNDGTKVMTL 191
Query: 105 PCGHQYHGDCIVPWLSSRNSCPVCRFQLPTDDK 137
PCGH++ +C++ W + + CP+CRF+LP +D+
Sbjct: 192 PCGHEFDDECVLTWFETNHDCPLCRFKLPCEDQ 224
>AT1G04790.1 | Symbols: | RING/U-box superfamily protein |
chr1:1345469-1348143 FORWARD LENGTH=634
Length = 634
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 44 EYEALMQILAESDGGGRKGAPPASKAAVEALPTVKIMSESDTVACAICKDLMGVGESAKR 103
+YE L LA + R G AS + LP + +++ C IC + +G++ +
Sbjct: 550 DYELL---LALDENNHRHGG--ASANRINNLPESTVQTDNFQETCVICLETPKIGDTIRH 604
Query: 104 LPCGHQYHGDCIVPWLSSRNSCPVCR 129
LPC H++H DCI PWL SCPVC+
Sbjct: 605 LPCLHKFHKDCIDPWLGRSKSCPVCK 630
>AT1G18770.1 | Symbols: | RING/U-box superfamily protein |
chr1:6473370-6474048 REVERSE LENGTH=106
Length = 106
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 10/112 (8%)
Query: 24 LQVPESDRYVGNPEDYVDATEYEALMQILAESDGGGRKGAPPASKAAVEAL--PTVKIMS 81
+++ S + NP+ E E + + A+ DG PASK V++L K+ +
Sbjct: 1 MKIYFSHSIIRNPQP-----ENEGTITVNAKIDG---YNPTPASKLVVKSLARKIYKMTT 52
Query: 82 ESDTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQLP 133
S C IC + G LPCGH + +C++ W + +SCP+CRF+LP
Sbjct: 53 SSTGEMCIICLEEFSEGRRVVTLPCGHDFDDECVLKWFETNHSCPLCRFKLP 104
>AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein |
chr3:20595300-20597188 REVERSE LENGTH=273
Length = 273
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 33/48 (68%)
Query: 84 DTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQ 131
D + C++C + + VGE + LPC HQ+H CI PWL + +CPVC+F+
Sbjct: 207 DELTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQGTCPVCKFR 254
>AT5G53910.1 | Symbols: | RING/U-box superfamily protein |
chr5:21890643-21891335 FORWARD LENGTH=230
Length = 230
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 57/141 (40%), Gaps = 12/141 (8%)
Query: 5 ILDWADILMGMEDNSIEFRLQVPESDRYVGNPEDYVDATEYEALMQILAESD----GGGR 60
IL + + NS E+ P V D EYE + S+ R
Sbjct: 83 ILKLTQLARDLTSNSFEY---CPRYALSVWLTLDVAPLNEYERNSEYRPASNLRVGALSR 139
Query: 61 KGAPPASKAAVEALPTVKIMSESDTVA-----CAICKDLMGVGESAKRLPCGHQYHGDCI 115
+ K + A + + M + +T + CAIC G L CGH++ CI
Sbjct: 140 RIYKRKQKTSSIANKSTRYMRKRETYSSGEYKCAICFQEFKTGREVATLLCGHEFDNKCI 199
Query: 116 VPWLSSRNSCPVCRFQLPTDD 136
+ W R +CP+CRF+LP +D
Sbjct: 200 MEWFKVRYNCPLCRFELPRED 220
>AT3G58720.1 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717892 REVERSE LENGTH=238
Length = 238
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 76 TVKIMSESDTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRF 130
T + E D C++C + E+ PC H +H +CIVPWL ++ CPVCRF
Sbjct: 132 TQNLSGEEDDKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCRF 186
>AT3G58720.2 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717908 REVERSE LENGTH=266
Length = 266
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 76 TVKIMSESDTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRF 130
T + E D C++C + E+ PC H +H +CIVPWL ++ CPVCRF
Sbjct: 160 TQNLSGEEDDKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCRF 214
>AT1G21960.1 | Symbols: | RING/U-box superfamily protein |
chr1:7725972-7726586 FORWARD LENGTH=204
Length = 204
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 65 PASKAAVEALP----TVKIMSESDTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLS 120
PA+K V+ L K S SD C IC + GE LPCGH++ CI W
Sbjct: 131 PANKLVVDRLARKVYNKKKKSNSDASVCTICLEEFEKGEIVVTLPCGHEFDDGCIGKWFL 190
Query: 121 SRNSCPVCRFQLP 133
+ CP+CRF+LP
Sbjct: 191 KDHVCPLCRFELP 203
>AT3G13228.1 | Symbols: | RING/U-box superfamily protein |
chr3:4267075-4268052 FORWARD LENGTH=325
Length = 325
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 41 DATEYEALMQILAESDGGGRKGAPPASKAAVEALPTVKIMSESDTVA--CAICKDLMGVG 98
D T+ E +Q+ + G PASK V++L T KI + + C IC + G
Sbjct: 229 DETDIEEAVQVSFDETTNFCLG--PASKLVVKSL-TRKIYDKINYTGERCTICLEEFNAG 285
Query: 99 ESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQLPTDDKE 138
LPCGH + +C V W + + CP+CR++LP ++ +
Sbjct: 286 GILVALPCGHDFDDECAVKWFETNHFCPLCRYELPREEDQ 325
>AT5G67120.1 | Symbols: | RING/U-box superfamily protein |
chr5:26787830-26789737 REVERSE LENGTH=272
Length = 272
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Query: 35 NPEDYVDATEYEALMQILAESDGGGRKGAPPASKAAVEALPTVKIMSESD--TVACAICK 92
NP + D YE L+ I E+ G R G + + E L K SD T C IC+
Sbjct: 175 NPSSHGDIFTYEELLSITDET-GDERTGL--SEEVIDENLIRRKYEKRSDDETKRCVICQ 231
Query: 93 DLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCR 129
+ E +L CGH +H CI WL N CP+C
Sbjct: 232 QKLKDNEEVSKLGCGHDFHFGCIKNWLMVTNKCPLCN 268
>AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 47/98 (47%), Gaps = 10/98 (10%)
Query: 41 DATEYEALMQILAESDGGGRKGAPPASKAAVEALPTVK-----IMSESDT-VACAICKDL 94
D YE L++ L E+ G +G S+ +E LPT K I S C IC+
Sbjct: 148 DTMTYEELVE-LGEAVGTESRGL---SQELIETLPTKKYKFGSIFSRKRAGERCVICQLK 203
Query: 95 MGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQL 132
+GE LPC H YH +CI WLS CPVC ++
Sbjct: 204 YKIGERQMNLPCKHVYHSECISKWLSINKVCPVCNSEV 241
>AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 47/98 (47%), Gaps = 10/98 (10%)
Query: 41 DATEYEALMQILAESDGGGRKGAPPASKAAVEALPTVK-----IMSESDT-VACAICKDL 94
D YE L++ L E+ G +G S+ +E LPT K I S C IC+
Sbjct: 148 DTMTYEELVE-LGEAVGTESRGL---SQELIETLPTKKYKFGSIFSRKRAGERCVICQLK 203
Query: 95 MGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQL 132
+GE LPC H YH +CI WLS CPVC ++
Sbjct: 204 YKIGERQMNLPCKHVYHSECISKWLSINKVCPVCNSEV 241
>AT1G73760.1 | Symbols: | RING/U-box superfamily protein |
chr1:27739366-27741161 REVERSE LENGTH=367
Length = 367
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 40 VDATEYEALMQILAESDGGGRKGAPPASKAAVEALPTVKIMSESDTVA---CAICKDLMG 96
VD YE L++ L E G G K L VK + TVA C IC+D
Sbjct: 271 VDNMTYEQLLE-LGERIGHVNTGL--TEKQIKSCLRKVKPCRQDTTVADRKCIICQDEYE 327
Query: 97 VGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCR 129
+ L CGH++H DC+ WL +NSCPVC+
Sbjct: 328 AKDEVGELRCGHRFHIDCVNQWLVRKNSCPVCK 360
>AT2G03000.1 | Symbols: | RING/U-box superfamily protein |
chr2:875233-877207 FORWARD LENGTH=535
Length = 535
Score = 56.2 bits (134), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 65 PASKAAVEALPTVKIMSESDTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNS 124
PA+ AV LP V ++ + + C IC + + LPC H+YH +C+ WL S
Sbjct: 461 PATIRAVAMLPRVAMVEKGE---CVICFEEWSKSDMETELPCKHKYHLECVEKWLKIHTS 517
Query: 125 CPVCRFQLPTDDKEF 139
CP CR++L K F
Sbjct: 518 CPQCRYKLSCVYKSF 532
>AT3G14970.1 | Symbols: | RING/U-box superfamily protein |
chr3:5039071-5039733 REVERSE LENGTH=220
Length = 220
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 60 RKGAPPASKAAVEA-LPTVKIMSESDTVACAICKDLMGVG--ESAKRLPCGHQYHGDCIV 116
R PAS AVE L TV + +ES C IC D + +G +A R+PC H +H C
Sbjct: 146 RLAVAPASNEAVEQHLETVVVENES---WCVICMDKIRIGLDVAAGRMPCSHVFHRTCGE 202
Query: 117 PWLSSRNSCPVCRFQLPT 134
WL CPVCR PT
Sbjct: 203 DWLRCSGICPVCRAMFPT 220
>AT1G18780.1 | Symbols: | RING/U-box superfamily protein |
chr1:6476258-6477235 REVERSE LENGTH=325
Length = 325
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 65 PASKAAVEALPTVKIMSESDTV----ACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLS 120
PASK V AL S V C IC + G S LPCGH++ +C++ W
Sbjct: 250 PASKLTVGALNRKTYKKASGVVCENDVCTICLEEFDDGRSIVTLPCGHEFDEECVLEWFV 309
Query: 121 SRNSCPVCRFQLP 133
+ CP+CR +LP
Sbjct: 310 RSHVCPLCRLELP 322
>AT1G35630.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:13163041-13164484 REVERSE
LENGTH=318
Length = 318
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 59 GRKGAPPASKAAVEALPT---VKIMSESDT-VACAICKDLMGVGESAKRLPCGHQYHGDC 114
G +G + ++++PT ++ ES T V CAIC D VGE + LPC H+YH C
Sbjct: 200 GGQGLSCMPRDLLQSMPTEVYSGVLEESSTSVTCAICIDDYCVGEKLRILPCKHKYHAVC 259
Query: 115 IVPWLSS-RNSCPVCR 129
I WL R+ CPVC+
Sbjct: 260 IDSWLGRCRSFCPVCK 275
>AT1G74620.1 | Symbols: | RING/U-box superfamily protein |
chr1:28028252-28029001 FORWARD LENGTH=249
Length = 249
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 87 ACAIC-KDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQLPTDDK 137
CAIC +D + +LPC H++HGDCI WL + CP+CR +P D K
Sbjct: 182 GCAICMEDYIEGSSIVAKLPCDHEFHGDCINKWLQLNHMCPLCRSSIPKDVK 233
>AT1G35625.1 | Symbols: | RING/U-box superfamily protein |
chr1:13158466-13159260 REVERSE LENGTH=201
Length = 201
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 59 GRKGAPPASKAAVEALPT---VKIMSE-SDTVACAICKDLMGVGESAKRLPCGHQYHGDC 114
G +G K ++++PT ++ E S +V CAIC D VGE + LPC H+YH C
Sbjct: 83 GGQGHSRMPKDLLQSMPTEVYTGVLEEGSTSVTCAICIDDYRVGEILRILPCKHKYHAVC 142
Query: 115 IVPWLSS-RNSCPVCR 129
I WL R+ CPVC+
Sbjct: 143 IDSWLGRCRSFCPVCK 158
>AT4G40070.1 | Symbols: | RING/U-box superfamily protein |
chr4:18576533-18577504 FORWARD LENGTH=323
Length = 323
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 55 SDGGGRKGAPPASKAAVEALPTVKIMSESDT------VACAICKDLMGVGESAKRLP-CG 107
+DG R+G A VE+ P S ++ + CAIC + + E+ + LP C
Sbjct: 87 NDGSSRRGG--LDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICN 144
Query: 108 HQYHGDCIVPWLSSRNSCPVCRFQL 132
H +H DCI WL S +CPVCR L
Sbjct: 145 HLFHIDCIDTWLYSHATCPVCRSNL 169
>AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:25515412-25516767 REVERSE
LENGTH=343
Length = 343
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 54 ESDGGGRKGAPPASKAAVEALPTVKIMSESDTVACAICKDLMGVGESAKRLPCGHQYHGD 113
+SDGGG K P AA E L +++ D C IC G LPC H +H
Sbjct: 262 QSDGGG-KMIP--VDAASENLGNERVLLPEDA-DCCICLSSYEDGAELVSLPCNHHFHST 317
Query: 114 CIVPWLSSRNSCPVCRFQLPTDDKE 138
CIV WL +CP+C+F + +++
Sbjct: 318 CIVKWLKMNATCPLCKFNILKGNEQ 342
>AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:27098250-27099881 FORWARD
LENGTH=448
Length = 448
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 5/68 (7%)
Query: 67 SKAAVEALPTVKIMS--ESDTVA--CAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSS- 121
S+ V+A+P++ S E +T A CAIC + VG+ + LPC H++H C+ WL+S
Sbjct: 207 SRRLVKAMPSLIFSSFHEDNTTAFTCAICLEDYTVGDKLRLLPCCHKFHAACVDSWLTSW 266
Query: 122 RNSCPVCR 129
R CPVC+
Sbjct: 267 RTFCPVCK 274
>AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A |
chr2:7576640-7577197 REVERSE LENGTH=185
Length = 185
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 82 ESDTVACAICKDLMGVGESAKRLP-CGHQYHGDCIVPWLSSRNSCPVCR 129
E D+ CAIC GE + LP CGH +H +CI WL SR+SCP CR
Sbjct: 96 EGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCR 144
>AT2G15580.1 | Symbols: | RING/U-box superfamily protein |
chr2:6797687-6798815 FORWARD LENGTH=196
Length = 196
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 88 CAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCR 129
CAIC D GE+ LPC H++H C++PWL + CP CR
Sbjct: 150 CAICLDRFKKGETLVHLPCAHKFHSICLLPWLDTNVYCPYCR 191
>AT1G65040.2 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24163365 REVERSE LENGTH=460
Length = 460
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 83 SDTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCR 129
S+ C IC++ M SAK+L CGH +H C+ WL +N+CP CR
Sbjct: 287 SNDATCIICREEM---TSAKKLVCGHLFHVHCLRSWLERQNTCPTCR 330
>AT1G35330.1 | Symbols: | RING/U-box superfamily protein |
chr1:12965046-12966113 FORWARD LENGTH=327
Length = 327
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 86 VACAICKDLMGVGESAKRLP-CGHQYHGDCIVPWLSSRNSCPVCRFQLP 133
V CAIC + E+ + +P C H +H CI WLSSR++CPVCR LP
Sbjct: 126 VECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASLP 174
>AT1G65040.3 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24163365 REVERSE LENGTH=389
Length = 389
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 83 SDTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCR 129
S+ C IC++ M SAK+L CGH +H C+ WL +N+CP CR
Sbjct: 216 SNDATCIICREEM---TSAKKLVCGHLFHVHCLRSWLERQNTCPTCR 259
>AT1G65040.1 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24161992 REVERSE LENGTH=281
Length = 281
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 83 SDTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCR 129
S+ C IC++ M SAK+L CGH +H C+ WL +N+CP CR
Sbjct: 108 SNDATCIICREEM---TSAKKLVCGHLFHVHCLRSWLERQNTCPTCR 151
>AT5G66070.2 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=245
Length = 245
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 70 AVEALPTVKIMSES-DTVACAICKDLMGVGESAKRLP-CGHQYHGDCIVPWLSSRNSCPV 127
++ +P V+I S + V+C++C VGE+ + LP C H +H CI WL SCP+
Sbjct: 181 SLNRIPKVRITDTSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPL 240
Query: 128 CRFQL 132
CR L
Sbjct: 241 CRRHL 245
>AT4G35840.1 | Symbols: | RING/U-box superfamily protein |
chr4:16981083-16982266 FORWARD LENGTH=236
Length = 236
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 14/97 (14%)
Query: 40 VDATEYEALMQILAESDGGGRKGAPPASKAAVEALPTVKIMSESDTVA------CAICKD 93
VD+T +E L I D GG KG + V+ +P +KI +++ A C++C
Sbjct: 144 VDST-FEELSSIF---DTGGSKGL---TGDLVDKIPKIKITGKNNLDASGNKDSCSVCLQ 196
Query: 94 LMGVGESAKRLP-CGHQYHGDCIVPWLSSRNSCPVCR 129
+GE+ + LP C H +H CI WL SCP+CR
Sbjct: 197 DFQLGETVRSLPHCHHMFHLPCIDNWLFRHGSCPMCR 233
>AT5G66070.1 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=221
Length = 221
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 70 AVEALPTVKIMSES-DTVACAICKDLMGVGESAKRLP-CGHQYHGDCIVPWLSSRNSCPV 127
++ +P V+I S + V+C++C VGE+ + LP C H +H CI WL SCP+
Sbjct: 157 SLNRIPKVRITDTSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPL 216
Query: 128 CRFQL 132
CR L
Sbjct: 217 CRRHL 221
>AT2G42350.1 | Symbols: | RING/U-box superfamily protein |
chr2:17639245-17639898 FORWARD LENGTH=217
Length = 217
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 70 AVEALPTVKIMSESDTVA--CAICKDLMGVGESAKRLP-CGHQYHGDCIVPWLSSRNSCP 126
+ +LPT + ++D CA+C L+ ++A+ LP C H +H C+ WL+++++CP
Sbjct: 80 VIASLPTFVVGIKNDVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCP 139
Query: 127 VCR 129
VCR
Sbjct: 140 VCR 142
>AT4G10160.1 | Symbols: | RING/U-box superfamily protein |
chr4:6336023-6337301 FORWARD LENGTH=225
Length = 225
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 67 SKAAVEALPTVKIMSESDTV---ACAICKDLMGVGESAKRLP-CGHQYHGDCIVPWLSSR 122
SK E LP V I ES TV C++C E +++P CGH +H +CI WL+S
Sbjct: 74 SKDIREMLPIV-IYKESFTVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSH 132
Query: 123 NSCPVCRFQL 132
+CP+CR L
Sbjct: 133 TTCPLCRLSL 142
>AT5G54990.1 | Symbols: | RING/U-box superfamily protein |
chr5:22317505-22318185 FORWARD LENGTH=226
Length = 226
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 88 CAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCR 129
C IC + G S +LPC H +H DCI+ WL SCP+CR
Sbjct: 174 CPICLTELSSGVSRMKLPCSHVFHRDCIMTWLKKNPSCPICR 215
>AT5G07225.1 | Symbols: | RING/U-box superfamily protein |
chr5:2268642-2270227 REVERSE LENGTH=234
Length = 234
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 67 SKAAVEALPTVKIMSESDTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCP 126
++ + LPT+K + C IC G+ LPC H+YH DCI WL + C
Sbjct: 167 TEGQISQLPTIKFKPSLEDKMCMICHSDYVRGDKLTILPCTHKYHKDCISHWLQNSKLCC 226
Query: 127 VCR 129
VC+
Sbjct: 227 VCQ 229
>AT5G42940.1 | Symbols: | RING/U-box superfamily protein |
chr5:17216649-17219171 REVERSE LENGTH=691
Length = 691
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 81 SESDTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCR 129
S D C +C++ GE L CGH++H CI WL +N CP+C+
Sbjct: 630 SPQDAEPCCVCQEEYTEGEDMGTLECGHEFHSQCIKEWLKQKNLCPICK 678
>AT1G23980.1 | Symbols: | RING/U-box superfamily protein |
chr1:8484879-8485988 REVERSE LENGTH=369
Length = 369
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 35 NPEDYVDATEYEALMQILAESDGGGRKGAPPASKAAVEALPTV---KIMSESDTVACAIC 91
NPE + D+ Y+ +Q L G +A ++ALP +I + CA+C
Sbjct: 95 NPE-FSDSDTYQRQLQQLFHLHDSG------LDQALIDALPVFLYKEIKGTKEPFDCAVC 147
Query: 92 KDLMGVGESAKRLP-CGHQYHGDCIVPWLSSRNSCPVCRFQLPTDDKEF 139
+ + LP C H +H DCI WL S ++CP+CR L + +F
Sbjct: 148 LCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTLFSLGHQF 196
>AT2G27940.1 | Symbols: | RING/U-box superfamily protein |
chr2:11897963-11898742 FORWARD LENGTH=237
Length = 237
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 70 AVEALPTVKIM--SESDTVACAICKDLMGVGESAKRLP-CGHQYHGDCIVPWLSSRNSCP 126
AV +LP + ++ C IC GE+ K +P CGH +H DC+ WLSS +CP
Sbjct: 120 AVRSLPVYRYTKAAKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCP 179
Query: 127 VCRFQLPTDDKEF 139
+CR DK+
Sbjct: 180 LCRSNQLFSDKDL 192
>AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein |
chr1:27226405-27227379 FORWARD LENGTH=324
Length = 324
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 71 VEALPTVKIMSES--DTVACAICKDLMGVGESAKRLP-CGHQYHGDCIVPWLSSRNSCPV 127
+ +LP V +S D + C+IC + G+ A+ LP C H +H +CI W S ++CP+
Sbjct: 108 LSSLPIVFFRQDSCKDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPI 167
Query: 128 CR 129
CR
Sbjct: 168 CR 169
>AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 |
chr3:17713367-17716051 REVERSE LENGTH=358
Length = 358
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 65 PASKAAVEAL----PTVKIMSESDTVA-CAICKDLMGVGESAKRLPCGHQYHGDCIVPWL 119
PA AVEAL P ++ + D C IC + +G + LPC H +H +CI WL
Sbjct: 207 PAQTEAVEALIQELPKFRLKAVPDDCGECLICLEEFHIGHEVRGLPCAHNFHVECIDQWL 266
Query: 120 SSRNSCPVCR 129
CP CR
Sbjct: 267 RLNVKCPRCR 276
>AT3G15740.1 | Symbols: | RING/U-box superfamily protein |
chr3:5333879-5334553 REVERSE LENGTH=224
Length = 224
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 62 GAPPASKAAVEA-LPTVKIMSESDTVACAICKDLMGVGE--SAKRLPCGHQYHGDCIVPW 118
PA+ AVE L T+ + +E C IC D + VG A R+PC H +H C W
Sbjct: 152 AVAPANDEAVEMHLETLVVENEG---YCVICMDNIRVGSDVEAGRMPCSHVFHRTCGEEW 208
Query: 119 LSSRNSCPVCRFQLP 133
L + CPVCR P
Sbjct: 209 LRNSGICPVCRALFP 223
>AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 |
chr2:7704142-7705312 FORWARD LENGTH=241
Length = 241
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 56 DGGGRKGAPPASKAAVEALPTVKIMSESDTVA------CAICKDLMGVGESAKRLP-CGH 108
D GG KG + VE +P + I ++T A C++C +GE+ + LP C H
Sbjct: 161 DTGGSKGL---TGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRSLPHCHH 217
Query: 109 QYHGDCIVPWLSSRNSCPVCR 129
+H CI WL SCP+CR
Sbjct: 218 MFHLPCIDNWLLRHGSCPMCR 238
>AT5G24870.2 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 80 MSESDTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCR 129
+++ D V C+IC++ G+ LPC H+YH C WL +N CP+C+
Sbjct: 460 LNKDDDVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICK 509
>AT5G24870.1 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 80 MSESDTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCR 129
+++ D V C+IC++ G+ LPC H+YH C WL +N CP+C+
Sbjct: 460 LNKDDDVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICK 509
>AT1G53190.2 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 50.1 bits (118), Expect = 6e-07, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 84 DTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCR 129
+T C IC++ E L CGH+YH +C+ WL +N CP+C+
Sbjct: 438 ETEPCTICQESFKNEEKIATLDCGHEYHAECLEKWLIVKNVCPICK 483
>AT1G53190.1 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 50.1 bits (118), Expect = 6e-07, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 84 DTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCR 129
+T C IC++ E L CGH+YH +C+ WL +N CP+C+
Sbjct: 438 ETEPCTICQESFKNEEKIATLDCGHEYHAECLEKWLIVKNVCPICK 483
>AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:8021854-8023516 REVERSE
LENGTH=422
Length = 422
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 68 KAAVEALPTVKI----MSESDTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSS-R 122
+ V+A+P+V + + +CAIC + VG+ + LPC H++H C+ WL S R
Sbjct: 208 RRTVKAMPSVTFTCAKIDNTTGFSCAICLEDYIVGDKLRVLPCSHKFHVACVDSWLISWR 267
Query: 123 NSCPVCR 129
CPVC+
Sbjct: 268 TFCPVCK 274
>AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein |
chr5:1746938-1747999 FORWARD LENGTH=353
Length = 353
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 68 KAAVEALPTVK---IMSESDTVACAICKDLMGVGESAKRLP-CGHQYHGDCIVPWLSSRN 123
++ +E+LP + + D + CA+C E + LP C H +H +C+ WL + +
Sbjct: 69 RSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHS 128
Query: 124 SCPVCRFQLPTDD 136
+CP+CR+++ +D
Sbjct: 129 TCPLCRYRVDPED 141
>AT4G10150.1 | Symbols: | RING/U-box superfamily protein |
chr4:6328136-6329558 FORWARD LENGTH=236
Length = 236
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 67 SKAAVEALPTVKIMSESDTVA---CAICKDLMGVGESAKRLP-CGHQYHGDCIVPWLSSR 122
SK E LP V I ES V C++C E +++P CGH +H +CI WL+S
Sbjct: 88 SKDIREMLPVV-IYKESFIVKDSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSH 146
Query: 123 NSCPVCRFQL 132
+CP+CR L
Sbjct: 147 TTCPLCRLSL 156
>AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 |
chr3:5692880-5693794 FORWARD LENGTH=304
Length = 304
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 71 VEALPTVKIMSES--DTVACAICKDLMGVGESAKRLP-CGHQYHGDCIVPWLSSRNSCPV 127
+++LP E+ D + CA+C E+ + LP C H +H DCI W S ++CP+
Sbjct: 100 IKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPL 159
Query: 128 CR 129
CR
Sbjct: 160 CR 161
>AT1G70910.1 | Symbols: DEP | RING/U-box superfamily protein |
chr1:26734155-26734640 FORWARD LENGTH=161
Length = 161
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Query: 48 LMQILAESDGGGRKGAPPASKAAVEALPTVKIMSESDTVACAICKDLMGVGESAKRLPCG 107
L IL+ K P + + T +I E D C +C L+ C
Sbjct: 74 LCSILSFKIAFEAKRVPGPLYISYDVTLTPQIFEEPDMETCGLC--LLEEQHLFDMPNCA 131
Query: 108 HQYHGDCIVPWLSSRNSCPVCRFQLPTDDK 137
H +HGDCI WLS+ N+CP+C ++ DD+
Sbjct: 132 HVFHGDCIDKWLSTSNNCPLCGVEIMDDDE 161
>AT3G20395.1 | Symbols: | RING/U-box superfamily protein |
chr3:7112020-7113792 REVERSE LENGTH=223
Length = 223
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 67 SKAAVEALPTVKIMSESDT-VACAICKDLMGVGESAKRLP-CGHQYHGDCIVPWLSSRNS 124
SK++++ +P SE T +C+IC GE ++L CGH +H +CI WL + +
Sbjct: 149 SKSSIQNIPMFYNRSEHQTKSSCSICLQDWEEGEVGRKLARCGHTFHMNCIDEWLLRQET 208
Query: 125 CPVCRFQLPTD 135
CP+CR L +
Sbjct: 209 CPICRDHLSHN 219
>AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogenesis
| chr2:324499-325895 FORWARD LENGTH=359
Length = 359
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 88 CAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQL 132
C IC G LPC H +H CIV WL R +CP+C++ +
Sbjct: 307 CCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNI 351
>AT2G44578.1 | Symbols: | RING/U-box superfamily protein |
chr2:18400864-18401301 REVERSE LENGTH=145
Length = 145
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 88 CAICKDLMGVGESAKRL-PCGHQYHGDCIVPWLSSRNSCPVCRFQLP 133
C IC + GE +R+ C H +H DCI PWL +++CP+CR ++P
Sbjct: 70 CTICLEDAAEGEKMRRITACSHCFHVDCIDPWLMKKSTCPLCRAEIP 116
>AT1G17970.1 | Symbols: | RING/U-box superfamily protein |
chr1:6185032-6187202 FORWARD LENGTH=368
Length = 368
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 88 CAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCR 129
C+IC+D + L CGH +H C+ WLS +N+CPVC+
Sbjct: 320 CSICQDEYEREDEVGELNCGHSFHVHCVKQWLSRKNACPVCK 361
>AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446878 FORWARD LENGTH=310
Length = 310
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 88 CAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSR-NSCPVCRFQLPTD 135
CAIC + GES + LPC H +H +CI WL+ SCPVC+ + T+
Sbjct: 232 CAICLEDYRFGESLRLLPCQHAFHLNCIDSWLTKWGTSCPVCKHDIRTE 280
>AT3G60966.1 | Symbols: | RING/U-box superfamily protein |
chr3:22552718-22553137 FORWARD LENGTH=139
Length = 139
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 88 CAICKDLMGVGESAKRLP-CGHQYHGDCIVPWLSSRNSCPVCRFQLP 133
CA+C GE +RL C H +H DCI WLS + CP+CR Q+P
Sbjct: 62 CAVCLQEAEEGEKMRRLTICRHCFHADCIDTWLSEMSKCPLCRAQIP 108
>AT5G66160.2 | Symbols: RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446722 FORWARD LENGTH=290
Length = 290
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 88 CAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSR-NSCPVCRFQLPTD 135
CAIC + GES + LPC H +H +CI WL+ SCPVC+ + T+
Sbjct: 232 CAICLEDYRFGESLRLLPCQHAFHLNCIDSWLTKWGTSCPVCKHDIRTE 280
>AT1G45180.1 | Symbols: | RING/U-box superfamily protein |
chr1:17099335-17101683 FORWARD LENGTH=645
Length = 645
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 81 SESDTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCR 129
S + C +C++ E RL CGH +H CI WL +N CP+C+
Sbjct: 585 SSQEVEPCCVCQEEYKEEEEIGRLECGHDFHSQCIKEWLKQKNLCPICK 633
>AT4G31450.1 | Symbols: | RING/U-box superfamily protein |
chr4:15255955-15257977 REVERSE LENGTH=497
Length = 497
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 88 CAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQLPTDDK 137
C+IC++ +G+ RL C H YH C+ WL ++ CP+C+ T K
Sbjct: 448 CSICQEEYTIGDEVGRLHCEHTYHVKCVQEWLRIKSWCPICKATAETSSK 497
>AT2G42360.1 | Symbols: | RING/U-box superfamily protein |
chr2:17640907-17641617 FORWARD LENGTH=236
Length = 236
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 7/68 (10%)
Query: 71 VEALPTVKIMSESDTVA-----CAICKDLMGVGESAKRLP-CGHQYHGDCIVPWLSSRNS 124
+ +LPT + +D VA CA+C ++ + A+ LP C H +H DC+ WL++ ++
Sbjct: 87 IASLPTFTV-GATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCST 145
Query: 125 CPVCRFQL 132
CPVCR ++
Sbjct: 146 CPVCRTEV 153
>AT2G37150.3 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15607600 REVERSE LENGTH=599
Length = 599
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 88 CAICKDLMGVGESAKRLP-CGHQYHGDCIVPWLSSRNSCPVCR 129
CAIC + E + CGH YHG CI WLS +NSCP+C+
Sbjct: 545 CAICLEEYKEKEELGEVKGCGHDYHGRCIKKWLSMKNSCPICK 587
>AT4G09120.1 | Symbols: | RING/U-box superfamily protein |
chr4:5813998-5815035 FORWARD LENGTH=345
Length = 345
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 68 KAAVEALPTVKIMSE-------SDTVACAICKDLMGVGESAKRLP-CGHQYHGDCIVPWL 119
K +E+ PT + SE V CAIC E+ + +P C H +H +CI WL
Sbjct: 97 KEVIESFPTF-LYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWL 155
Query: 120 SSRNSCPVCRFQL 132
SS ++CPVCR L
Sbjct: 156 SSWSTCPVCRANL 168
>AT1G33480.1 | Symbols: | RING/U-box superfamily protein |
chr1:12148758-12150121 REVERSE LENGTH=261
Length = 261
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 67 SKAAVEALPTVKIMSESDTV---ACAICKDLMGVGESAKRLP-CGHQYHGDCIVPWLSSR 122
SK E LP V + ES TV C++C + +++P C H +H DCI WL+S
Sbjct: 77 SKELREMLPIV-VFKESFTVMDSQCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLTSH 135
Query: 123 NSCPVCRFQL 132
+CP+CR L
Sbjct: 136 TTCPLCRLAL 145
>AT5G58580.1 | Symbols: ATL63, TL63 | TOXICOS EN LEVADURA 63 |
chr5:23676906-23677832 REVERSE LENGTH=308
Length = 308
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 88 CAICKDLMGVGESAKRL-PCGHQYHGDCIVPWLSSRNSCPVCR 129
C IC L G+ ++L CGH +H +CI WLSS ++CP+CR
Sbjct: 138 CVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCR 180
>AT5G47610.1 | Symbols: | RING/U-box superfamily protein |
chr5:19301399-19301899 REVERSE LENGTH=166
Length = 166
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 60 RKGAPPASKAAVEALPTVKIMSESDTVA----CAICKDLMGVGESAKRL-PCGHQYHGDC 114
K P A+ ++ PT+ S+ + CAIC GES + L C H +H C
Sbjct: 75 HKPDPEAAASSTPTTPTLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKC 134
Query: 115 IVPWLSSRNSCPVCRFQLPTDDKE 138
I WLS+R+SCP CR + + E
Sbjct: 135 IHKWLSTRSSCPTCRTSIFSQHSE 158
>AT2G44581.1 | Symbols: | RING/U-box superfamily protein |
chr2:18397996-18398433 REVERSE LENGTH=145
Length = 145
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 88 CAICKDLMGVGESAKRLP-CGHQYHGDCIVPWLSSRNSCPVCRFQLP 133
C IC + GE +R+ C H +H DCI PWL ++ CP+CR ++P
Sbjct: 70 CTICLENATEGEKMRRIAACSHCFHVDCIDPWLEKKSMCPLCRAEIP 116
>AT1G53820.1 | Symbols: | RING/U-box superfamily protein |
chr1:20091491-20092423 FORWARD LENGTH=310
Length = 310
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 84 DTVACAICKDLMGVGESAKRLP-CGHQYHGDCIVPWLSSRNSCPVCR 129
D + CA+C + G+ A+ LP C H +H DCI W S ++CP+CR
Sbjct: 116 DGLECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCR 162
>AT4G09110.1 | Symbols: | RING/U-box superfamily protein |
chr4:5812488-5813396 FORWARD LENGTH=302
Length = 302
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 86 VACAICKDLMGVGESAKRLP-CGHQYHGDCIVPWLSSRNSCPVCRFQL 132
V CAIC E+ + +P C H +H +CI WLSS+++CP CR L
Sbjct: 121 VECAICLSEFVDKETLRWMPPCSHTFHANCIDVWLSSQSTCPACRANL 168
>AT2G15530.4 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777899 FORWARD LENGTH=780
Length = 780
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 88 CAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRF 130
C IC++ G++ L CGH++H DCI W+ +N CP+ RF
Sbjct: 656 CCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPIFRF 698
>AT2G37150.2 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15605988 REVERSE LENGTH=546
Length = 546
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 88 CAICKDLMGVGESAKRLP-CGHQYHGDCIVPWLSSRNSCPVCR 129
CAIC + E + CGH YHG CI WLS +NSCP+C+
Sbjct: 492 CAICLEEYKEKEELGEVKGCGHDYHGRCIKKWLSMKNSCPICK 534
>AT2G37150.1 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15605988 REVERSE LENGTH=546
Length = 546
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 88 CAICKDLMGVGESAKRLP-CGHQYHGDCIVPWLSSRNSCPVCR 129
CAIC + E + CGH YHG CI WLS +NSCP+C+
Sbjct: 492 CAICLEEYKEKEELGEVKGCGHDYHGRCIKKWLSMKNSCPICK 534
>AT4G09130.1 | Symbols: | RING/U-box superfamily protein |
chr4:5815849-5816922 FORWARD LENGTH=357
Length = 357
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 86 VACAICKDLMGVGESAKRLP-CGHQYHGDCIVPWLSSRNSCPVCRFQL 132
V CAIC E + +P C H +H +CI WLSSR++CPVCR L
Sbjct: 118 VECAICLCEFEDEEPLRWMPPCSHTFHANCIDEWLSSRSTCPVCRANL 165
>AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein |
chr1:28668915-28669472 FORWARD LENGTH=185
Length = 185
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 47 ALMQILAESDGGGRKGAPPAS-------KAAVEALPTVKIMSES----DTVACAICKDLM 95
A ++ +A + + PP + K + +LP + +S V CAIC
Sbjct: 52 AWLRRIASRNRSDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEF 111
Query: 96 GVGESAKRLP-CGHQYHGDCIVPWLSSRNSCPVCR 129
G+ + LP CGH +H CI WL S +SCP CR
Sbjct: 112 AAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCR 146
>AT1G20823.1 | Symbols: | RING/U-box superfamily protein |
chr1:7238880-7239473 FORWARD LENGTH=197
Length = 197
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 68 KAAVEALPTVKIMSES----DTVACAICKDLMGVGESAKRLP-CGHQYHGDCIVPWLSSR 122
K +++LP + ES CAIC G+ + LP CGH +H CI WL S
Sbjct: 87 KKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSH 146
Query: 123 NSCPVCR 129
+SCP CR
Sbjct: 147 SSCPSCR 153
>AT5G10650.2 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 84 DTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCR 129
D + C+IC++ G+ +PC H YH C+ WL +N CP+C+
Sbjct: 471 DDIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPICK 516
>AT5G10650.1 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 84 DTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCR 129
D + C+IC++ G+ +PC H YH C+ WL +N CP+C+
Sbjct: 471 DDIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPICK 516
>AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B |
chr4:16852233-16852835 REVERSE LENGTH=200
Length = 200
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 74 LPTVKIMSESDTVACAICKDLMGVGESAKRLP-CGHQYHGDCIVPWLSSRNSCPVCR 129
LP + + CAIC GE + LP C H +H CI WL+SR+SCP CR
Sbjct: 99 LPCSSVGDGDSSTECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCR 155
>AT4G12140.1 | Symbols: | RING/U-box superfamily protein |
chr4:7266546-7267154 REVERSE LENGTH=202
Length = 202
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 84 DTVACAICKDLMGVGESAK----RLPCGHQYHGDCIVPWLSSRNSCPVCRFQL 132
+T +C+IC L + S+K R+ C H +H C+V WL +N+CP+CR L
Sbjct: 149 ETDSCSIC--LQSLVSSSKTGPTRMSCSHVFHSSCLVEWLKRKNTCPMCRTVL 199
>AT4G12210.1 | Symbols: | RING/U-box superfamily protein |
chr4:7281308-7281919 REVERSE LENGTH=203
Length = 203
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 68 KAAVEALPTVKIMSESDTVACAICKDLMGVG---ESAKRLPCGHQYHGDCIVPWLSSRNS 124
+ E L ++K+ +ES C+IC + + G R+ C H +H C++ W +N+
Sbjct: 137 RIKAEELKSLKMETES----CSICLENLVSGPKPSDLTRMTCSHVFHNPCLLEWFMRKNT 192
Query: 125 CPVCRFQL 132
CP+CR +L
Sbjct: 193 CPLCRTEL 200
>AT1G49230.1 | Symbols: | RING/U-box superfamily protein |
chr1:18209320-18209979 FORWARD LENGTH=219
Length = 219
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 41/91 (45%), Gaps = 10/91 (10%)
Query: 52 LAESDGGG-----RKGAPPASKAAVEALPTVKIMSESDT----VACAICKDLMGVGESAK 102
L S+ GG R + A+++ TV +E + CAIC E K
Sbjct: 86 LVPSEAGGDNYPVRLTNTGVKRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVK 145
Query: 103 RLP-CGHQYHGDCIVPWLSSRNSCPVCRFQL 132
LP C H +H CI WLSS +SCP CR L
Sbjct: 146 LLPTCHHGFHVRCIDKWLSSHSSCPTCRHCL 176
>AT2G15530.3 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 88 CAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCR 129
C IC++ G++ L CGH++H DCI W+ +N CP+C+
Sbjct: 656 CCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICK 697
>AT2G15530.2 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 88 CAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCR 129
C IC++ G++ L CGH++H DCI W+ +N CP+C+
Sbjct: 656 CCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICK 697
>AT2G15530.1 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 88 CAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCR 129
C IC++ G++ L CGH++H DCI W+ +N CP+C+
Sbjct: 656 CCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICK 697
>AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVERSE
LENGTH=257
Length = 257
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 82 ESDTVACAICKDLMGVGESAKRLP-CGHQYHGDCIVPWLSSRNSCPVCR 129
ES C++C + + LP CGH +H DCI W SR+SCP+CR
Sbjct: 107 ESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCR 155
>AT4G05350.1 | Symbols: | RING/U-box superfamily protein |
chr4:2726910-2727530 REVERSE LENGTH=206
Length = 206
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 84 DTVACAICKDLMGVGESAK---RLPCGHQYHGDCIVPWLSSRNSCPVCRFQL 132
+T C+IC + + G + R+ C H +H C++ WL +N+CP+CR ++
Sbjct: 153 ETEPCSICLESLVSGPKPRDVTRMTCSHVFHNGCLLEWLKRKNTCPLCRTEI 204
>AT4G34040.1 | Symbols: | RING/U-box superfamily protein |
chr4:16304638-16307503 REVERSE LENGTH=666
Length = 666
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 81 SESDTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCR 129
S D C +C++ G+ L CGH++H C+ WL +N CP+C+
Sbjct: 612 SHQDMEPCCVCQEEYAEGDDLGTLGCGHEFHTACVKQWLMLKNLCPICK 660
>AT4G12190.1 | Symbols: | RING/U-box superfamily protein |
chr4:7278545-7278760 REVERSE LENGTH=71
Length = 71
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 68 KAAVEALPTVKIMSESDTVACAICKDLMGVGESAK---RLPCGHQYHGDCIVPWLSSRNS 124
+ E L ++K+ +T C+IC + + G + R+ C H +H C++ WL +N+
Sbjct: 6 RIKTEELKSLKM----ETEPCSICLESLVSGPKPRDITRMTCSHVFHNGCLLEWLKRKNT 61
Query: 125 CPVCRFQL 132
CP+CR +L
Sbjct: 62 CPLCRTEL 69
>AT5G36001.1 | Symbols: | RING/U-box superfamily protein |
chr5:14142050-14143143 FORWARD LENGTH=322
Length = 322
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 82 ESDTVACAICKDLMGVGESAKRLP-CGHQYHGDCIVPWLSSRNSCPVCR 129
+DT+ C IC E+ K LP C H +H +CI PWL NSCPVCR
Sbjct: 259 RNDTL-CPICLSEYTSEETVKCLPECEHCFHTECIDPWLKLHNSCPVCR 306
>AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348728-4350512 FORWARD LENGTH=408
Length = 408
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 88 CAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQL 132
C IC G + LPCGH +H C+ WL +CP+C++ +
Sbjct: 353 CCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNI 397
>AT5G53110.1 | Symbols: | RING/U-box superfamily protein |
chr5:21529022-21533008 FORWARD LENGTH=382
Length = 382
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 40/100 (40%), Gaps = 7/100 (7%)
Query: 31 RYVGNPEDYVDATEYEALMQILAESDGGGRKGAPPASKAAVEALPTVKIMSESDTVACAI 90
R V PE Y I+ DG + P + LP V D CAI
Sbjct: 279 RLVPTPEINNAQAHYLHSSVIVMGLDGPTIESYPKIVLGESKRLPKV------DDATCAI 332
Query: 91 CKDLMGVGESAKRLP-CGHQYHGDCIVPWLSSRNSCPVCR 129
C E+ + +P C H +H DCI WL +CPVCR
Sbjct: 333 CLSEYEPKETLRTIPQCQHCFHADCIDEWLKLNGTCPVCR 372
>AT2G18670.1 | Symbols: | RING/U-box superfamily protein |
chr2:8093469-8094452 FORWARD LENGTH=181
Length = 181
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 67 SKAAVEALPTVKIMSESDTVA-----CAICKDLMGVGESAKRLP-CGHQYHGDCIVPWLS 120
S V+ LP K SE T C +C D G+ + LP CGH +H C+ WL
Sbjct: 85 SSRFVKKLPQFK-FSEPSTYTRYESDCVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWLL 143
Query: 121 SRNSCPVCR 129
++CP+CR
Sbjct: 144 KASTCPICR 152
>AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348941-4350512 FORWARD LENGTH=337
Length = 337
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 88 CAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCRFQL 132
C IC G + LPCGH +H C+ WL +CP+C++ +
Sbjct: 282 CCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNI 326
>AT1G80400.1 | Symbols: | RING/U-box superfamily protein |
chr1:30225864-30227360 FORWARD LENGTH=407
Length = 407
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 78 KIMSESDTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPWLSSRNSCPVCR 129
K + + +C IC G E + LPC H +H DC+ WL +CP+C+
Sbjct: 345 KRLISGEDASCCICLTRYGDDEQVRELPCSHVFHVDCVDKWLKINATCPLCK 396
>AT5G45290.2 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=546
Length = 546
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 62 GAPPASKAAVEALPTVKIMSES---DTVACAICKDLMGVGESAKRLPCGHQYHGDCIVPW 118
G+ PA V+ LP +K+ ++S D C IC +S + LPC H++H C+ W
Sbjct: 462 GSVPAPNDVVDLLP-IKLYTKSQSEDPSQCYICLVEYEEADSIRTLPCHHEFHKTCVDKW 520
Query: 119 LSSRNS--CPVCR 129
L +S CP+CR
Sbjct: 521 LKEIHSRVCPLCR 533
>AT2G25410.1 | Symbols: | RING/U-box superfamily protein |
chr2:10814470-10815917 FORWARD LENGTH=377
Length = 377
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 67 SKAAVEALPTVKIMSESDTVACAICKDLMGVGESAKRLP-CGHQYHGDCIVPWLSSRNSC 125
S VE + ++ + S+ V C IC E+ + LP C H +H +CI WL +SC
Sbjct: 306 SYKKVELGESRRLPTGSNDVVCPICLSEYATKETVRCLPECEHCFHTECIDAWLKLHSSC 365
Query: 126 PVCR 129
PVCR
Sbjct: 366 PVCR 369