Miyakogusa Predicted Gene

Lj5g3v2259640.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2259640.1 tr|Q0TPS1|Q0TPS1_CLOP1 Riboflavin biosynthesis
protein RibF OS=Clostridium perfringens (strain ATCC
,31.22,0.0000000000001,PROTEIN-S ISOPRENYLCYSTEINE
O-METHYLTRANSFERASE,NULL; FAD_syn,FAD synthetase; seg,NULL; no
descripti,CUFF.57107.1
         (374 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G23330.1 | Symbols:  | Nucleotidylyl transferase superfamily ...   381   e-106
AT5G08340.1 | Symbols:  | Nucleotidylyl transferase superfamily ...   376   e-104
AT5G08340.2 | Symbols:  | Nucleotidylyl transferase superfamily ...   367   e-102

>AT5G23330.1 | Symbols:  | Nucleotidylyl transferase superfamily
           protein | chr5:7854194-7855738 FORWARD LENGTH=354
          Length = 354

 Score =  381 bits (978), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 190/312 (60%), Positives = 237/312 (75%), Gaps = 8/312 (2%)

Query: 60  SHCFSATPSKSPGEFPLLFDCFSQQEEEREIMSDGKSAVAGGIVALGKFDALHIGHRELA 119
           SHC      K+P + P   DCFSQ ++  E+ ++G S VAGGIVALGKFDALHIGHRELA
Sbjct: 50  SHC------KTPRKIPAPLDCFSQGDDHPELSAEGLSPVAGGIVALGKFDALHIGHRELA 103

Query: 120 IQASKAGQPFLLSFAGMAKVLGWENRAPIVAKSDRKRVLSSWAPYCGNMVPEEFQIEFSS 179
           IQA++ G P+LLSF G+A+VLGW+ RAPIVAK DRKRVLSSWA YCGN+ P EF+IEF+S
Sbjct: 104 IQAARIGTPYLLSFVGLAEVLGWKPRAPIVAKCDRKRVLSSWASYCGNIAPVEFEIEFAS 163

Query: 180 VRHLSPRQFVEKLSRELRVRGVVAGENYRFGYKAAGDALELVKLCEEFGMEAYIIKSVMD 239
           VRHL+P+QFVEKLSRELRV GVVAGENYRFGY+A+GDA ELV+LC++FG+ AYII SVMD
Sbjct: 164 VRHLNPQQFVEKLSRELRVCGVVAGENYRFGYRASGDASELVRLCKDFGISAYIINSVMD 223

Query: 240 KNLSSANLDFSTS-SKERGQVSSTRVREALAVGDMRYVSELLGRQHRLILMATDQERFSV 298
           KN  S N +   S SKERGQVSSTRVR ALA GD+RYV+ELLGR HR+I     Q+  + 
Sbjct: 224 KNQVSVNTEEEDSKSKERGQVSSTRVRHALAAGDVRYVTELLGRPHRVISRTRTQD-LTS 282

Query: 299 GQGKVSAPRSCLLNLAPKEGLYEKCSLFLGQEHVVQCRLVIDNKFVYIETDQGGLSDIFG 358
            +G++S   S LLNL P  G+Y+ CSL +G +H + C++++D   +YIET++    +   
Sbjct: 283 KRGRISLQTSSLLNLPPGNGVYKACSLIVGDKHPISCKVIVDTSNLYIETEEERFHNSDE 342

Query: 359 TQNLQFLHIEFG 370
           +Q  Q L IEFG
Sbjct: 343 SQEFQLLGIEFG 354


>AT5G08340.1 | Symbols:  | Nucleotidylyl transferase superfamily
           protein | chr5:2683901-2685604 FORWARD LENGTH=367
          Length = 367

 Score =  376 bits (965), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 190/311 (61%), Positives = 236/311 (75%), Gaps = 9/311 (2%)

Query: 60  SHCFSATPSKSPGEFPLLFDCFSQQEEEREIMSDGKSAVAGGIVALGKFDALHIGHRELA 119
           SHC      ++ GE P+L +CFSQ+E++ E+  +G S V+GGIVALGKFDALHIGHREL 
Sbjct: 66  SHC------RTSGEVPILHNCFSQREDDPELPVEGLSPVSGGIVALGKFDALHIGHRELT 119

Query: 120 IQASKAGQPFLLSFAGMAKVLGWENRAPIVAKSDRKRVLSSWAPYCGNMVPEEFQIEFSS 179
           IQAS+ G P+LLSF GMA+VLGWE RAPIVAK DR+RVL+SWA YCG+  PEE++IEF+S
Sbjct: 120 IQASRIGAPYLLSFVGMAEVLGWEPRAPIVAKCDRQRVLTSWASYCGDRAPEEYEIEFAS 179

Query: 180 VRHLSPRQFVEKLSRELRVRGVVAGENYRFGYKAAGDALELVKLCEEFGMEAYIIKSVMD 239
           VRHL+PRQFVEKLS+ELRV GVVAGENYRFGYKA+GDA ELV+LCEE G+ A II SVMD
Sbjct: 180 VRHLTPRQFVEKLSKELRVCGVVAGENYRFGYKASGDASELVRLCEECGITACIINSVMD 239

Query: 240 KNLSSANLDFSTSSKERGQVSSTRVREALAVGDMRYVSELLGRQHRLILMATDQERFSVG 299
               SA  D S  SK+RGQVSSTRVR+ALA GDMRYVSELLGR HRLIL    Q+  S  
Sbjct: 240 MKQGSAKRD-SGDSKDRGQVSSTRVRQALAAGDMRYVSELLGRAHRLILRVRTQDMPS-- 296

Query: 300 QGKVSAPRSCLLNLAPKEGLYEKCSLFLGQEHVVQCRLVIDNKFVYIETDQGGLSDIFGT 359
           +  +S PRS +LNL P  G+Y+ C L +G E  V C +V+D   +++ET++  L ++  +
Sbjct: 297 ERMISVPRSSILNLPPGIGIYKACLLLVGDESSVPCTVVVDTSNIHVETEEVRLCNLDWS 356

Query: 360 QNLQFLHIEFG 370
           Q  + + +EFG
Sbjct: 357 QEFRLVSVEFG 367


>AT5G08340.2 | Symbols:  | Nucleotidylyl transferase superfamily
           protein | chr5:2683901-2685682 FORWARD LENGTH=351
          Length = 351

 Score =  367 bits (943), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 185/291 (63%), Positives = 225/291 (77%), Gaps = 9/291 (3%)

Query: 60  SHCFSATPSKSPGEFPLLFDCFSQQEEEREIMSDGKSAVAGGIVALGKFDALHIGHRELA 119
           SHC      ++ GE P+L +CFSQ+E++ E+  +G S V+GGIVALGKFDALHIGHREL 
Sbjct: 66  SHC------RTSGEVPILHNCFSQREDDPELPVEGLSPVSGGIVALGKFDALHIGHRELT 119

Query: 120 IQASKAGQPFLLSFAGMAKVLGWENRAPIVAKSDRKRVLSSWAPYCGNMVPEEFQIEFSS 179
           IQAS+ G P+LLSF GMA+VLGWE RAPIVAK DR+RVL+SWA YCG+  PEE++IEF+S
Sbjct: 120 IQASRIGAPYLLSFVGMAEVLGWEPRAPIVAKCDRQRVLTSWASYCGDRAPEEYEIEFAS 179

Query: 180 VRHLSPRQFVEKLSRELRVRGVVAGENYRFGYKAAGDALELVKLCEEFGMEAYIIKSVMD 239
           VRHL+PRQFVEKLS+ELRV GVVAGENYRFGYKA+GDA ELV+LCEE G+ A II SVMD
Sbjct: 180 VRHLTPRQFVEKLSKELRVCGVVAGENYRFGYKASGDASELVRLCEECGITACIINSVMD 239

Query: 240 KNLSSANLDFSTSSKERGQVSSTRVREALAVGDMRYVSELLGRQHRLILMATDQERFSVG 299
               SA  D S  SK+RGQVSSTRVR+ALA GDMRYVSELLGR HRLIL    Q+  S  
Sbjct: 240 MKQGSAKRD-SGDSKDRGQVSSTRVRQALAAGDMRYVSELLGRAHRLILRVRTQDMPS-- 296

Query: 300 QGKVSAPRSCLLNLAPKEGLYEKCSLFLGQEHVVQCRLVIDNKFVYIETDQ 350
           +  +S PRS +LNL P  G+Y+ C L +G E  V C +V+D   +++ET++
Sbjct: 297 ERMISVPRSSILNLPPGIGIYKACLLLVGDESSVPCTVVVDTSNIHVETEE 347