Miyakogusa Predicted Gene
- Lj5g3v2258560.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2258560.1 Non Chatacterized Hit- tr|A5BC54|A5BC54_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,35.56,0.00004,SUBFAMILY NOT NAMED,NULL; RING ZINC FINGER
PROTEIN,NULL; RING/U-box,NULL; seg,NULL; zf-RING_2,Zinc f,CUFF.57101.1
(327 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G19950.1 | Symbols: | RING/U-box superfamily protein | chr3:... 259 2e-69
AT1G55530.1 | Symbols: | RING/U-box superfamily protein | chr1:... 151 5e-37
AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |... 146 2e-35
AT3G13430.3 | Symbols: | RING/U-box superfamily protein | chr3:... 145 3e-35
AT3G13430.2 | Symbols: | RING/U-box superfamily protein | chr3:... 145 3e-35
AT3G13430.1 | Symbols: | RING/U-box superfamily protein | chr3:... 145 3e-35
AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 134 1e-31
AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 134 1e-31
AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 134 1e-31
AT3G56580.3 | Symbols: | RING/U-box superfamily protein | chr3:... 129 4e-30
AT3G56580.1 | Symbols: | RING/U-box superfamily protein | chr3:... 129 4e-30
AT3G56580.2 | Symbols: | RING/U-box superfamily protein | chr3:... 129 4e-30
AT4G26400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 128 4e-30
AT4G26400.2 | Symbols: | RING/U-box superfamily protein | chr4:... 128 4e-30
AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 124 7e-29
AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 124 1e-28
AT5G01980.1 | Symbols: | RING/U-box superfamily protein | chr5:... 119 4e-27
AT1G60360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 113 2e-25
AT2G39720.1 | Symbols: RHC2A | RING-H2 finger C2A | chr2:1656750... 112 5e-25
AT5G15820.1 | Symbols: | RING/U-box superfamily protein | chr5:... 110 1e-24
AT5G08139.1 | Symbols: | RING/U-box superfamily protein | chr5:... 107 9e-24
AT3G02340.1 | Symbols: | RING/U-box superfamily protein | chr3:... 103 1e-22
AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein | c... 98 8e-21
AT5G64920.1 | Symbols: CIP8 | COP1-interacting protein 8 | chr5:... 92 4e-19
AT3G10815.1 | Symbols: | RING/U-box superfamily protein | chr3:... 90 2e-18
AT1G68180.1 | Symbols: | RING/U-box superfamily protein | chr1:... 86 3e-17
AT1G26800.1 | Symbols: | RING/U-box superfamily protein | chr1:... 84 1e-16
AT5G60820.1 | Symbols: | RING/U-box superfamily protein | chr5:... 83 2e-16
AT3G60080.1 | Symbols: | RING/U-box superfamily protein | chr3:... 80 2e-15
AT1G14200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 78 7e-15
AT2G44330.1 | Symbols: | RING/U-box superfamily protein | chr2:... 72 4e-13
AT5G02750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 71 1e-12
AT2G29840.1 | Symbols: | RING/U-box superfamily protein | chr2:... 70 2e-12
AT1G18760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 67 2e-11
AT2G03000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 67 2e-11
AT1G18770.1 | Symbols: | RING/U-box superfamily protein | chr1:... 66 3e-11
AT3G30460.1 | Symbols: | RING/U-box superfamily protein | chr3:... 63 3e-10
AT3G13228.1 | Symbols: | RING/U-box superfamily protein | chr3:... 62 4e-10
AT5G66070.2 | Symbols: | RING/U-box superfamily protein | chr5:... 61 1e-09
AT5G66070.1 | Symbols: | RING/U-box superfamily protein | chr5:... 61 1e-09
AT3G58720.1 | Symbols: | RING/U-box superfamily protein | chr3:... 60 2e-09
AT3G58720.2 | Symbols: | RING/U-box superfamily protein | chr3:... 60 2e-09
AT5G52140.1 | Symbols: | RING/U-box superfamily protein | chr5:... 60 2e-09
AT1G49850.1 | Symbols: | RING/U-box superfamily protein | chr1:... 60 2e-09
AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 | chr2:7... 60 3e-09
AT3G14970.1 | Symbols: | RING/U-box superfamily protein | chr3:... 60 3e-09
AT1G18780.1 | Symbols: | RING/U-box superfamily protein | chr1:... 59 6e-09
AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 59 6e-09
AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 59 6e-09
AT1G74620.1 | Symbols: | RING/U-box superfamily protein | chr1:... 59 6e-09
AT5G53910.1 | Symbols: | RING/U-box superfamily protein | chr5:... 59 7e-09
AT1G21960.1 | Symbols: | RING/U-box superfamily protein | chr1:... 58 8e-09
AT4G10150.1 | Symbols: | RING/U-box superfamily protein | chr4:... 58 1e-08
AT1G74410.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 1e-08
AT4G10160.1 | Symbols: | RING/U-box superfamily protein | chr4:... 57 1e-08
AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 | chr3:1771336... 57 2e-08
AT4G31450.1 | Symbols: | RING/U-box superfamily protein | chr4:... 57 2e-08
AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein | c... 57 2e-08
AT5G24870.2 | Symbols: | RING/U-box superfamily protein | chr5:... 57 3e-08
AT5G24870.1 | Symbols: | RING/U-box superfamily protein | chr5:... 57 3e-08
AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive... 56 3e-08
AT5G10650.2 | Symbols: | RING/U-box superfamily protein | chr5:... 56 3e-08
AT5G10650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 56 3e-08
AT5G06490.1 | Symbols: | RING/U-box superfamily protein | chr5:... 56 3e-08
AT2G15580.1 | Symbols: | RING/U-box superfamily protein | chr2:... 56 3e-08
AT4G35840.1 | Symbols: | RING/U-box superfamily protein | chr4:... 56 4e-08
AT5G36001.1 | Symbols: | RING/U-box superfamily protein | chr5:... 56 4e-08
AT3G61180.1 | Symbols: | RING/U-box superfamily protein | chr3:... 56 4e-08
AT5G01880.1 | Symbols: | RING/U-box superfamily protein | chr5:... 56 4e-08
AT4G32600.1 | Symbols: | RING/U-box superfamily protein | chr4:... 55 5e-08
AT1G72200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 5e-08
AT5G45290.1 | Symbols: | RING/U-box superfamily protein | chr5:... 55 6e-08
AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein | ... 55 7e-08
AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogene... 55 8e-08
AT3G19910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 55 9e-08
AT5G42200.1 | Symbols: | RING/U-box superfamily protein | chr5:... 55 9e-08
AT1G15100.1 | Symbols: RHA2A | RING-H2 finger A2A | chr1:5193703... 55 9e-08
AT4G26580.2 | Symbols: | RING/U-box superfamily protein | chr4:... 55 1e-07
AT4G26580.1 | Symbols: | RING/U-box superfamily protein | chr4:... 55 1e-07
AT1G49230.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 1e-07
AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 | chr3:... 54 1e-07
AT1G80400.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 1e-07
AT4G05350.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 2e-07
AT1G04790.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 2e-07
AT4G12190.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 2e-07
AT1G17970.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 2e-07
AT1G33480.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 2e-07
AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region t... 54 2e-07
AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVE... 53 2e-07
AT5G66160.2 | Symbols: RMR1 | receptor homology region transmemb... 53 2e-07
AT1G35330.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 3e-07
AT1G20823.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 3e-07
AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 53 3e-07
AT2G42360.1 | Symbols: | RING/U-box superfamily protein | chr2:... 53 3e-07
AT4G24015.1 | Symbols: | RING/U-box superfamily protein | chr4:... 53 3e-07
AT5G47610.1 | Symbols: | RING/U-box superfamily protein | chr5:... 53 4e-07
AT1G49200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 4e-07
AT3G15740.1 | Symbols: | RING/U-box superfamily protein | chr3:... 52 4e-07
AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 52 4e-07
AT4G40070.1 | Symbols: | RING/U-box superfamily protein | chr4:... 52 4e-07
AT3G10910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 52 4e-07
AT2G35420.1 | Symbols: | RING/U-box superfamily protein | chr2:... 52 4e-07
AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 52 5e-07
AT1G73760.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 5e-07
AT3G18930.2 | Symbols: | RING/U-box superfamily protein | chr3:... 52 5e-07
AT3G18930.1 | Symbols: | RING/U-box superfamily protein | chr3:... 52 5e-07
AT3G15070.2 | Symbols: | RING/U-box superfamily protein | chr3:... 52 5e-07
AT3G15070.1 | Symbols: | RING/U-box superfamily protein | chr3:... 52 5e-07
AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zi... 52 6e-07
AT4G12210.1 | Symbols: | RING/U-box superfamily protein | chr4:... 52 6e-07
AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 52 7e-07
AT2G35000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 52 7e-07
AT1G22500.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 7e-07
AT5G45290.2 | Symbols: | RING/U-box superfamily protein | chr5:... 52 8e-07
AT4G00305.1 | Symbols: | RING/U-box superfamily protein | chr4:... 52 8e-07
AT4G11360.1 | Symbols: RHA1B | RING-H2 finger A1B | chr4:6906066... 51 9e-07
AT2G25410.1 | Symbols: | RING/U-box superfamily protein | chr2:... 51 1e-06
AT1G49210.1 | Symbols: | RING/U-box superfamily protein | chr1:... 51 1e-06
AT5G54990.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 1e-06
AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein | c... 51 1e-06
AT1G53190.2 | Symbols: | RING/U-box superfamily protein | chr1:... 51 1e-06
AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein | c... 51 1e-06
AT1G53190.1 | Symbols: | RING/U-box superfamily protein | chr1:... 51 1e-06
AT4G09120.1 | Symbols: | RING/U-box superfamily protein | chr4:... 51 1e-06
AT2G34990.1 | Symbols: | RING/U-box superfamily protein | chr2:... 50 1e-06
AT2G42350.1 | Symbols: | RING/U-box superfamily protein | chr2:... 50 2e-06
AT2G46160.1 | Symbols: | RING/U-box superfamily protein | chr2:... 50 2e-06
AT1G53010.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 2e-06
AT2G35910.1 | Symbols: | RING/U-box superfamily protein | chr2:... 50 2e-06
AT4G28890.1 | Symbols: | RING/U-box superfamily protein | chr4:... 50 2e-06
AT1G65040.2 | Symbols: | RING/U-box superfamily protein | chr1:... 50 2e-06
AT5G67120.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 2e-06
AT4G09130.1 | Symbols: | RING/U-box superfamily protein | chr4:... 50 2e-06
AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein | ... 50 2e-06
AT3G03550.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 2e-06
AT1G65040.3 | Symbols: | RING/U-box superfamily protein | chr1:... 50 2e-06
AT1G49220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 2e-06
AT3G47180.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 3e-06
AT5G05280.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 3e-06
AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 50 3e-06
AT2G01150.1 | Symbols: RHA2B | RING-H2 finger protein 2B | chr2:... 50 3e-06
AT1G65040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 3e-06
AT3G18773.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 3e-06
AT5G42940.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 3e-06
AT5G55970.2 | Symbols: | RING/U-box superfamily protein | chr5:... 50 3e-06
AT5G55970.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 3e-06
AT1G35625.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 3e-06
AT3G61550.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 3e-06
AT5G57750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 3e-06
AT4G15975.1 | Symbols: | RING/U-box superfamily protein | chr4:... 49 3e-06
AT1G35630.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 49 3e-06
AT2G15530.3 | Symbols: | RING/U-box superfamily protein | chr2:... 49 3e-06
AT2G15530.2 | Symbols: | RING/U-box superfamily protein | chr2:... 49 3e-06
AT2G15530.1 | Symbols: | RING/U-box superfamily protein | chr2:... 49 3e-06
AT4G11370.1 | Symbols: RHA1A | RING-H2 finger A1A | chr4:6907777... 49 4e-06
AT5G53110.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 5e-06
AT1G28040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 5e-06
AT5G07225.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 5e-06
AT2G37580.1 | Symbols: | RING/U-box superfamily protein | chr2:... 49 5e-06
AT5G17600.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 5e-06
AT4G34040.1 | Symbols: | RING/U-box superfamily protein | chr4:... 49 6e-06
AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B | chr4:1685223... 49 6e-06
AT1G72220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 7e-06
AT2G20030.1 | Symbols: | RING/U-box superfamily protein | chr2:... 49 7e-06
AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein | ... 48 8e-06
AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 | chr3:... 48 8e-06
AT2G27940.1 | Symbols: | RING/U-box superfamily protein | chr2:... 48 8e-06
AT1G04360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 48 9e-06
AT4G33565.1 | Symbols: | RING/U-box superfamily protein | chr4:... 48 9e-06
AT5G41400.1 | Symbols: | RING/U-box superfamily protein | chr5:... 48 9e-06
AT2G24480.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 48 1e-05
AT3G11110.1 | Symbols: | RING/U-box superfamily protein | chr3:... 48 1e-05
>AT3G19950.1 | Symbols: | RING/U-box superfamily protein |
chr3:6942853-6943839 FORWARD LENGTH=328
Length = 328
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/268 (50%), Positives = 165/268 (61%), Gaps = 28/268 (10%)
Query: 2 SSGSGGIKP-----FFCHVCSRRFTCS-DDDSEPFCPICLEGFVEELXXXXXXXXXXVAL 55
S+GS P FFC+ C++ T S ++PFCPIC +GF+EE +L
Sbjct: 7 STGSAAAAPEVDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQ----SL 62
Query: 56 HFGXXXXXXXXXXXXXXXX-------XXXXXXXAVDF----------QNPHSGTRPESDM 98
+F +DF Q + P+SD
Sbjct: 63 NFNPNSSDSFFPMADPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDA 122
Query: 99 FDPILFLQNHLQGLRADGANVQFEV-DHPGEPGLRLPANLGDYFLGPGLEQLIQQLAEND 157
FDP FLQNHLQ LR+ G + +F + +HP +PG R+P N GDYF GPGLEQLIQQLAEND
Sbjct: 123 FDPFTFLQNHLQTLRSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAEND 182
Query: 158 PNRYGTPPASKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMPCKHVYHDEC 217
PNRYGTPPASK AI+ LPTV V ++L SE+NQCAVC DEFE G+ VKQMPCKHV+H +C
Sbjct: 183 PNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDC 242
Query: 218 LLPWLQLHNSCPVCRYELPTDDADYENR 245
LLPWL+LHNSCPVCR+ELPTDD DYENR
Sbjct: 243 LLPWLELHNSCPVCRFELPTDDPDYENR 270
>AT1G55530.1 | Symbols: | RING/U-box superfamily protein |
chr1:20729472-20730527 REVERSE LENGTH=351
Length = 351
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 68/109 (62%), Positives = 87/109 (79%), Gaps = 7/109 (6%)
Query: 133 LPA-NLGDYFLGPGLEQLIQQLAENDPNRYGTPPASKDAIEKLPTVTVDDELLSSELNQC 191
+PA +LGDYF+GPG E L+Q+LAENDPNRYGTPPA K+A+E L TV +++ L QC
Sbjct: 170 VPAGSLGDYFIGPGFEMLLQRLAENDPNRYGTPPAKKEAVEALATVKIEETL------QC 223
Query: 192 AVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYELPTDDA 240
+VC D+FE GT+ K MPC H +H +CLLPWL+LH+SCPVCRY+LP D+A
Sbjct: 224 SVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQLPADEA 272
>AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |
chr5:22818254-22819444 FORWARD LENGTH=396
Length = 396
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 88/113 (77%), Gaps = 7/113 (6%)
Query: 135 ANLGDYFLGPGLEQLIQQLAENDPNRYGTPPASKDAIEKLPTVTVDDELLSSELNQCAVC 194
+LGDYF+GPGL+ L+Q LAENDPNR GTPPA K+A+E LPTV + + L QC+VC
Sbjct: 209 TSLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALPTVKIMEPL------QCSVC 262
Query: 195 QDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYELPTD-DADYENRS 246
D+FEKGT+ K+MPCKH +H C++PWL+LH+SCPVCR+ELP+ D D E ++
Sbjct: 263 LDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFELPSSADDDDETKT 315
>AT3G13430.3 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 67/108 (62%), Positives = 84/108 (77%), Gaps = 6/108 (5%)
Query: 135 ANLGDYFLGPGLEQLIQQLAEND-PNRYGTPPASKDAIEKLPTVTVDDELLSSELNQCAV 193
+LGDYF+GPG E L+Q+LAEND NRYGTPPA+K+A+E L V ++D LL QC+V
Sbjct: 173 GSLGDYFIGPGFETLLQRLAENDLNNRYGTPPATKEAVEALAMVKIEDSLL-----QCSV 227
Query: 194 CQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYELPTDDAD 241
C D+FE G + K+MPCKH +H +CLLPWL+LH+SCPVCRY LPT D D
Sbjct: 228 CLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLPTGDDD 275
>AT3G13430.2 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 67/108 (62%), Positives = 84/108 (77%), Gaps = 6/108 (5%)
Query: 135 ANLGDYFLGPGLEQLIQQLAEND-PNRYGTPPASKDAIEKLPTVTVDDELLSSELNQCAV 193
+LGDYF+GPG E L+Q+LAEND NRYGTPPA+K+A+E L V ++D LL QC+V
Sbjct: 173 GSLGDYFIGPGFETLLQRLAENDLNNRYGTPPATKEAVEALAMVKIEDSLL-----QCSV 227
Query: 194 CQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYELPTDDAD 241
C D+FE G + K+MPCKH +H +CLLPWL+LH+SCPVCRY LPT D D
Sbjct: 228 CLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLPTGDDD 275
>AT3G13430.1 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 67/108 (62%), Positives = 84/108 (77%), Gaps = 6/108 (5%)
Query: 135 ANLGDYFLGPGLEQLIQQLAEND-PNRYGTPPASKDAIEKLPTVTVDDELLSSELNQCAV 193
+LGDYF+GPG E L+Q+LAEND NRYGTPPA+K+A+E L V ++D LL QC+V
Sbjct: 173 GSLGDYFIGPGFETLLQRLAENDLNNRYGTPPATKEAVEALAMVKIEDSLL-----QCSV 227
Query: 194 CQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYELPTDDAD 241
C D+FE G + K+MPCKH +H +CLLPWL+LH+SCPVCRY LPT D D
Sbjct: 228 CLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLPTGDDD 275
>AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 108/232 (46%), Gaps = 10/232 (4%)
Query: 12 FCHVCSRRFTCSDDDSEPFCPICLEGFVEELXXXXXXXXXXVALHFGXXXXXXXXXXXXX 71
+CH C R EP C C GFVEEL H G
Sbjct: 9 WCHRCQRAVRLHGQ--EPVCFYCGGGFVEELDMAQASPFDMFRSHRGVVERDQTFDLMDA 66
Query: 72 XXXXXXXXXXAVDFQNPHSG----TRPES-DMFDPILFLQNHLQGLRADGANVQFEVDHP 126
G + PE+ P+L + R G N + +
Sbjct: 67 FSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVP-YRLTGDNAVEALFNG 125
Query: 127 GEPGLRLP-ANLGDYFLGPGLEQLIQQLAENDPNRYGTPPASKDAIEKLPTVTVDDELLS 185
G PG+ + N GDYF GPGLE+L +QL+ R G PPA + AI+ LPT+ + L
Sbjct: 126 GSPGIGITRGNTGDYFFGPGLEELFEQLSAGT-TRRGPPPAPRSAIDALPTIKIAQRHLR 184
Query: 186 SELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYELPT 237
S + C VC+DEFE G++ KQMPC H+YH +C++PWL HNSCPVCR ELP+
Sbjct: 185 SSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPS 236
>AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 108/232 (46%), Gaps = 10/232 (4%)
Query: 12 FCHVCSRRFTCSDDDSEPFCPICLEGFVEELXXXXXXXXXXVALHFGXXXXXXXXXXXXX 71
+CH C R EP C C GFVEEL H G
Sbjct: 9 WCHRCQRAVRLHGQ--EPVCFYCGGGFVEELDMAQASPFDMFRSHRGVVERDQTFDLMDA 66
Query: 72 XXXXXXXXXXAVDFQNPHSG----TRPES-DMFDPILFLQNHLQGLRADGANVQFEVDHP 126
G + PE+ P+L + R G N + +
Sbjct: 67 FSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVP-YRLTGDNAVEALFNG 125
Query: 127 GEPGLRLP-ANLGDYFLGPGLEQLIQQLAENDPNRYGTPPASKDAIEKLPTVTVDDELLS 185
G PG+ + N GDYF GPGLE+L +QL+ R G PPA + AI+ LPT+ + L
Sbjct: 126 GSPGIGITRGNTGDYFFGPGLEELFEQLSAGT-TRRGPPPAPRSAIDALPTIKIAQRHLR 184
Query: 186 SELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYELPT 237
S + C VC+DEFE G++ KQMPC H+YH +C++PWL HNSCPVCR ELP+
Sbjct: 185 SSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPS 236
>AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 108/232 (46%), Gaps = 10/232 (4%)
Query: 12 FCHVCSRRFTCSDDDSEPFCPICLEGFVEELXXXXXXXXXXVALHFGXXXXXXXXXXXXX 71
+CH C R EP C C GFVEEL H G
Sbjct: 9 WCHRCQRAVRLHGQ--EPVCFYCGGGFVEELDMAQASPFDMFRSHRGVVERDQTFDLMDA 66
Query: 72 XXXXXXXXXXAVDFQNPHSG----TRPES-DMFDPILFLQNHLQGLRADGANVQFEVDHP 126
G + PE+ P+L + R G N + +
Sbjct: 67 FSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVP-YRLTGDNAVEALFNG 125
Query: 127 GEPGLRLP-ANLGDYFLGPGLEQLIQQLAENDPNRYGTPPASKDAIEKLPTVTVDDELLS 185
G PG+ + N GDYF GPGLE+L +QL+ R G PPA + AI+ LPT+ + L
Sbjct: 126 GSPGIGITRGNTGDYFFGPGLEELFEQLSAGT-TRRGPPPAPRSAIDALPTIKIAQRHLR 184
Query: 186 SELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYELPT 237
S + C VC+DEFE G++ KQMPC H+YH +C++PWL HNSCPVCR ELP+
Sbjct: 185 SSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPS 236
>AT3G56580.3 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 75/107 (70%), Gaps = 1/107 (0%)
Query: 130 GLRLPANLGDYFLGPGLEQLIQQLAENDPNRYGTPPASKDAIEKLPTVTVDDELLSSELN 189
G+ N GDYF GPGLE+LI+QL+ +R G PPA K +I+ LPT+ + + L S +
Sbjct: 126 GIARGTNAGDYFFGPGLEELIEQLSSGTHHR-GPPPAPKSSIDALPTIKITQKHLKSSDS 184
Query: 190 QCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYELP 236
C VC+DEFE ++ KQMPC H+YH +C++PWL HNSCPVCR ELP
Sbjct: 185 HCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELP 231
>AT3G56580.1 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 75/107 (70%), Gaps = 1/107 (0%)
Query: 130 GLRLPANLGDYFLGPGLEQLIQQLAENDPNRYGTPPASKDAIEKLPTVTVDDELLSSELN 189
G+ N GDYF GPGLE+LI+QL+ +R G PPA K +I+ LPT+ + + L S +
Sbjct: 126 GIARGTNAGDYFFGPGLEELIEQLSSGTHHR-GPPPAPKSSIDALPTIKITQKHLKSSDS 184
Query: 190 QCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYELP 236
C VC+DEFE ++ KQMPC H+YH +C++PWL HNSCPVCR ELP
Sbjct: 185 HCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELP 231
>AT3G56580.2 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 75/107 (70%), Gaps = 1/107 (0%)
Query: 130 GLRLPANLGDYFLGPGLEQLIQQLAENDPNRYGTPPASKDAIEKLPTVTVDDELLSSELN 189
G+ N GDYF GPGLE+LI+QL+ +R G PPA K +I+ LPT+ + + L S +
Sbjct: 126 GIARGTNAGDYFFGPGLEELIEQLSSGTHHR-GPPPAPKSSIDALPTIKITQKHLKSSDS 184
Query: 190 QCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYELP 236
C VC+DEFE ++ KQMPC H+YH +C++PWL HNSCPVCR ELP
Sbjct: 185 HCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELP 231
>AT4G26400.1 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 78/103 (75%), Gaps = 6/103 (5%)
Query: 137 LGDYFLGPGLEQLIQQLAENDPNRYGTPPASKDAIEKLPTVTVDDELLSSELNQCAVCQD 196
+GDYF+G L+ L++ LA+ND R+G+ PA K+ ++ LPTV + + L QC++C D
Sbjct: 193 IGDYFVGSSLDHLLEHLADNDSIRHGSLPARKEVVDNLPTVKISESL------QCSICLD 246
Query: 197 EFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYELPTDD 239
+F+KG++ K+MPCKH +H C++PWL+LH+SCPVCRYELP DD
Sbjct: 247 DFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYELPPDD 289
>AT4G26400.2 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 78/103 (75%), Gaps = 6/103 (5%)
Query: 137 LGDYFLGPGLEQLIQQLAENDPNRYGTPPASKDAIEKLPTVTVDDELLSSELNQCAVCQD 196
+GDYF+G L+ L++ LA+ND R+G+ PA K+ ++ LPTV + + L QC++C D
Sbjct: 193 IGDYFVGSSLDHLLEHLADNDSIRHGSLPARKEVVDNLPTVKISESL------QCSICLD 246
Query: 197 EFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYELPTDD 239
+F+KG++ K+MPCKH +H C++PWL+LH+SCPVCRYELP DD
Sbjct: 247 DFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYELPPDD 289
>AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:17178837-17180024 REVERSE
LENGTH=395
Length = 395
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 116/256 (45%), Gaps = 40/256 (15%)
Query: 11 FFCHVCSRRFTCSDD---DSEPFCPICLEGFVEELXXXXXXXXXXVALHFGXXXXXXXXX 67
++C+ C+R + +D ++ CP C GF+EE+ +
Sbjct: 31 YWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIEDSSNSTVAAIP------------- 77
Query: 68 XXXXXXXXXXXXXXAVDFQNPHSGTRPESDMFDPILFLQ--------NHLQGLRADGAN- 118
F+P++ L ++ DGA
Sbjct: 78 ----ASTPEVRSVEETHRSIIRRRRSNRRTSFNPVIVLHGGGGGGAGERVENEEGDGATR 133
Query: 119 ----VQFEVDHPGEPGLR-LPANLGDYFLGPGLEQLIQQLAE-----NDPNRYGTPPASK 168
+F D GLR LP ++ + +G G E+L++QL++ N R G PPASK
Sbjct: 134 ERRAYEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASK 193
Query: 169 DAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSC 228
AIE LP V + D +E N CAVC + FE G + ++MPCKH++H +C++PWL + NSC
Sbjct: 194 SAIESLPRVEISDCHTKAEAN-CAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSC 252
Query: 229 PVCRYELPTDDADYEN 244
PVCR+ELP+D N
Sbjct: 253 PVCRFELPSDPIQRSN 268
>AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:23998422-23999645 REVERSE
LENGTH=407
Length = 407
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 96/163 (58%), Gaps = 15/163 (9%)
Query: 99 FDPILFLQNHLQGLRA--------DGANVQFEVDHPGEPGLR-LPANLGDYFLGPGLEQL 149
F+P++ LQ D +F D GLR LP ++ + +G G E+L
Sbjct: 94 FNPVIVLQGGAGEREEGEEGDAARDRRAFEFYYDDGSGSGLRPLPDSVSEILMGSGFERL 153
Query: 150 IQQLAENDPN-----RYGTPPASKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQV 204
++QL++ + + R G PPASK AIE LP V + D + SE N CAVC + FE T+
Sbjct: 154 LEQLSQIEASATGIGRSGNPPASKSAIESLPRVEISDCHIGSEAN-CAVCTEIFETETEA 212
Query: 205 KQMPCKHVYHDECLLPWLQLHNSCPVCRYELPTDDADYENRSQ 247
++MPCKH++HD+C++PWL + NSCPVCR+ELP++ N ++
Sbjct: 213 REMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSEPNRRSNNNE 255
>AT5G01980.1 | Symbols: | RING/U-box superfamily protein |
chr5:375542-377023 FORWARD LENGTH=493
Length = 493
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
Query: 135 ANLGDYFLGPGLEQLIQQLAENDPNRYGTPPASKDAIEKLPTVTVDDELLSSELNQCAVC 194
AN+GDY G ++L++QLAE+D +R G PPAS + LP V + +E + L CA+C
Sbjct: 295 ANVGDYLDERGFDELLEQLAESDNSRRGAPPASVSCVRNLPRVIIAEEHVMKGL-VCAIC 353
Query: 195 QDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYELPTDDADYE 243
++ F + Q+PC H+YH C++PWL NSCP+CRYELPTDD DYE
Sbjct: 354 KELFSLRNETTQLPCLHLYHAHCIVPWLSARNSCPLCRYELPTDDKDYE 402
>AT1G60360.1 | Symbols: | RING/U-box superfamily protein |
chr1:22242748-22243731 REVERSE LENGTH=327
Length = 327
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 78/113 (69%), Gaps = 3/113 (2%)
Query: 136 NLGDYFLGPG-LEQLIQQLAENDPNRYGTPPASKDAIEKLPTVTVDDELLSSELNQCAVC 194
N DYF G LEQLI+QL ++D R G PPAS+ I LP+V + + L+++++QC VC
Sbjct: 170 NSHDYFTGASSLEQLIEQLTQDD--RPGPPPASEPTINSLPSVKITPQHLTNDMSQCTVC 227
Query: 195 QDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYELPTDDADYENRSQ 247
+EF G ++PCKH+YH +C++PWL+L+NSCP+CR +LP + E+R +
Sbjct: 228 MEEFIVGGDATELPCKHIYHKDCIVPWLRLNNSCPICRRDLPLVNTVAESRER 280
>AT2G39720.1 | Symbols: RHC2A | RING-H2 finger C2A |
chr2:16567506-16568711 REVERSE LENGTH=401
Length = 401
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 82/133 (61%), Gaps = 8/133 (6%)
Query: 115 DGANVQFEVDHPGEPGLR-LPANLGDYFLGPGLEQLIQQLAENDPNRYGT------PPAS 167
D + Q D + GLR LP ++ ++ LG G ++L+ Q+++ + N PPAS
Sbjct: 117 DRSAFQMYYDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHPPAS 176
Query: 168 KDAIEKLPTVTVD-DELLSSELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHN 226
K AIE LP + +D LLS + CAVC++ F + ++MPC H+YH +C+LPWL + N
Sbjct: 177 KSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRN 236
Query: 227 SCPVCRYELPTDD 239
SCPVCR+ELP +D
Sbjct: 237 SCPVCRHELPAED 249
>AT5G15820.1 | Symbols: | RING/U-box superfamily protein |
chr5:5161787-5162833 FORWARD LENGTH=348
Length = 348
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 69/99 (69%)
Query: 149 LIQQLAENDPNRYGTPPASKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMP 208
+I Q+ +N+ GTPPASK ++ LP V + E LSS CA+C+DE +VK++P
Sbjct: 249 IIGQMFDNETGIKGTPPASKSVVDGLPDVELTIEELSSVSIVCAICKDEVVFKEKVKRLP 308
Query: 209 CKHVYHDECLLPWLQLHNSCPVCRYELPTDDADYENRSQ 247
CKH YH EC++PWL + N+CPVCR+ELPTDD +YE + +
Sbjct: 309 CKHYYHGECIIPWLGIRNTCPVCRHELPTDDLEYERKRR 347
>AT5G08139.1 | Symbols: | RING/U-box superfamily protein |
chr5:2616487-2617617 FORWARD LENGTH=376
Length = 376
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 88/155 (56%), Gaps = 12/155 (7%)
Query: 101 PILFLQNHLQGLRADGA-NVQFEV--DHPGEPG-------LRLPANLGDYFLGPGLEQLI 150
PI+ L+ + RA+G+ N+ +EV +H E L + + DY + L
Sbjct: 211 PIISLEGLVTRERAEGSGNLGWEVLLNHTLEINFDVDNRELYIGGDHDDYV--QDYDMLF 268
Query: 151 QQLAENDPNRYGTPPASKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMPCK 210
+Q A+ + + G PP SK + LP V ++ E CAVC+DE G + Q+PC
Sbjct: 269 EQFADAEVSVIGLPPTSKSFLNNLPVVLLEGENDDDGGLVCAVCKDEMNIGNKAVQLPCN 328
Query: 211 HVYHDECLLPWLQLHNSCPVCRYELPTDDADYENR 245
H YH EC++PWL++ N+CPVCRYELPTDDA+YE R
Sbjct: 329 HKYHSECIVPWLKVRNTCPVCRYELPTDDAEYEQR 363
>AT3G02340.1 | Symbols: | RING/U-box superfamily protein |
chr3:477032-478261 FORWARD LENGTH=409
Length = 409
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 65/97 (67%)
Query: 147 EQLIQQLAENDPNRYGTPPASKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQ 206
+ ++ Q+ +++ G PPA+K I+ LP V + E L N CAVC+DE +V++
Sbjct: 291 DAILGQMFDDETGIRGNPPAAKSVIQDLPVVELAVEELDKGNNVCAVCKDEMLVEEKVRR 350
Query: 207 MPCKHVYHDECLLPWLQLHNSCPVCRYELPTDDADYE 243
+PC H YH EC++PWL + N+CPVCRYELPTDD +YE
Sbjct: 351 LPCSHFYHGECIIPWLGIRNTCPVCRYELPTDDLEYE 387
>AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein |
chr5:7092663-7094310 REVERSE LENGTH=310
Length = 310
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 73/122 (59%), Gaps = 6/122 (4%)
Query: 126 PGEPGLRLPANLGDYFLGPGLEQLIQQ-LAENDPNRYGTPPASKDAIEKLPTVTVDDELL 184
P E + ANL + GL+ +I L + P R PPASK+ +EKLP + +ELL
Sbjct: 165 PTENTIGETANLMQELIN-GLDMIIPDILDDGGPPR--APPASKEVVEKLPVIIFTEELL 221
Query: 185 SS--ELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYELPTDDADY 242
+C +C++ G +++++PCKH +H CL PWL HNSCP+CR+ELPTDD Y
Sbjct: 222 KKFGAEAECCICKENLVIGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDDQKY 281
Query: 243 EN 244
EN
Sbjct: 282 EN 283
>AT5G64920.1 | Symbols: CIP8 | COP1-interacting protein 8 |
chr5:25944338-25945342 REVERSE LENGTH=334
Length = 334
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 78/150 (52%), Gaps = 19/150 (12%)
Query: 102 ILFLQNHLQGLRADGANVQFEVDHPGEPGLRLPANLGDYFL-GPGLEQLIQQLAENDPNR 160
IL L G+ + + E D R N DY G E L+Q LAE D
Sbjct: 171 ILDWAEILMGIEDNSIEFRMESD-------RYAGNPADYIDDAAGYEALLQNLAEGDGGG 223
Query: 161 YG----TPPASKDAIEKLPTVTVDDELLSSE---LNQCAVCQDEFEKGTQVKQMPCKHVY 213
G PPA+K AIE L T E+ SSE + CAVC+D G K++PC H Y
Sbjct: 224 GGGRRGAPPAAKSAIEALETF----EVSSSEGEMVMVCAVCKDGMVMGETGKKLPCGHCY 279
Query: 214 HDECLLPWLQLHNSCPVCRYELPTDDADYE 243
H +C++PWL NSCPVCR++L TDDA+YE
Sbjct: 280 HGDCIVPWLGTRNSCPVCRFQLETDDAEYE 309
>AT3G10815.1 | Symbols: | RING/U-box superfamily protein |
chr3:3385009-3385608 REVERSE LENGTH=199
Length = 199
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 159 NRYGTPPASKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMPCKHVYHDECL 218
+R G PPAS AI L + + + L + C VCQD+FE G+ ++MPCKH+YH EC+
Sbjct: 90 DRRGPPPASLAAINSLQKIKIRQKHLGLD-PYCPVCQDQFEIGSDARKMPCKHIYHSECI 148
Query: 219 LPWLQLHNSCPVCRYELPTDDAD 241
LPWL N+CPVCR ELP D +
Sbjct: 149 LPWLVQRNTCPVCRKELPQDRNN 171
>AT1G68180.1 | Symbols: | RING/U-box superfamily protein |
chr1:25554816-25555562 FORWARD LENGTH=248
Length = 248
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 162 GTPPASKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPW 221
G PPAS+ AIE + TV + DE L E CA+C++EFE G + K++ C H+YH C++ W
Sbjct: 110 GPPPASQSAIEAVRTVIITDEDLVKE-KVCAICKEEFEVGEEGKELKCLHLYHSSCIVSW 168
Query: 222 LQLHNSCPVCRYEL 235
L +HN+CP+CR+E+
Sbjct: 169 LNIHNTCPICRFEV 182
>AT1G26800.1 | Symbols: | RING/U-box superfamily protein |
chr1:9285576-9286190 REVERSE LENGTH=204
Length = 204
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 145 GLEQLIQQLAENDPNRYGTPPASKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQV 204
G+ L++ L E+ G PPASK +I+ +P V +D +C +C +E++ V
Sbjct: 74 GMNPLLRSLLES--REEGRPPASKASIDAMPIVEID-----GCEGECVICLEEWKSEETV 126
Query: 205 KQMPCKHVYHDECLLPWLQLHNSCPVCRYELPTD 238
K+MPCKH +H C+ WL H SCPVCRYE+P D
Sbjct: 127 KEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160
>AT5G60820.1 | Symbols: | RING/U-box superfamily protein |
chr5:24469636-24470895 FORWARD LENGTH=419
Length = 419
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Query: 162 GTPPASKDAIEKLPTVTVDDELLSSELNQ---CAVCQDEFEKGTQVKQMPCKHVYHDECL 218
G PPASK I+ L + +E + + CAVC++E G +V ++PC+H YH EC+
Sbjct: 340 GKPPASKSFIKNLKVSPLSNEDVMENDDDAVCCAVCKEEMIVGKEVAELPCRHKYHSECI 399
Query: 219 LPWLQLHNSCPVCRYELPTD 238
+PWL + N+CPVCR+ELP+D
Sbjct: 400 VPWLGIRNTCPVCRFELPSD 419
>AT3G60080.1 | Symbols: | RING/U-box superfamily protein |
chr3:22187635-22188555 FORWARD LENGTH=306
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 16/119 (13%)
Query: 135 ANLGDYFL--GPGLEQLIQQLAENDPNRYGTPPASKDA-------IEKLPTVTVDDELLS 185
N D FL P L +L++ LA ++ + +S + I+ +PT+ + LL
Sbjct: 97 VNSDDNFLLDSPYLHRLLRHLASDNSGSSSSSSSSSSSSLLKSSDIDSIPTIQISSSLLC 156
Query: 186 SELNQ-------CAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYELPT 237
S + CAVC+++F G +++PC H+YH +C++PWL HNSCP+CR+ELPT
Sbjct: 157 STDDSDPDSVLLCAVCKEDFIIGESARRLPCSHIYHSDCIVPWLSDHNSCPLCRFELPT 215
>AT1G14200.1 | Symbols: | RING/U-box superfamily protein |
chr1:4854532-4855071 REVERSE LENGTH=179
Length = 179
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 156 NDPNRYGTPPASKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMPCKHVYHD 215
+D + G PA K +E +P V + ++ CA+C DE+ KG +MPCKH +H
Sbjct: 75 SDGGKQGRSPALKSEVENMPRVVIGEDK-EKYGGSCAICLDEWSKGDVAAEMPCKHKFHS 133
Query: 216 ECLLPWLQLHNSCPVCRYELP 236
+C+ WL H +CP+CRYE+P
Sbjct: 134 KCVEEWLGRHATCPMCRYEMP 154
>AT2G44330.1 | Symbols: | RING/U-box superfamily protein |
chr2:18310621-18311163 FORWARD LENGTH=180
Length = 180
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 52/78 (66%), Gaps = 5/78 (6%)
Query: 169 DAIEKLPTVTVDDELLSSELNQ-----CAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQ 223
D +E LPT+ + +LSS + CA+C+++F G +++PC H+YH++C++PWL
Sbjct: 69 DPMESLPTIKISSSMLSSASSDDSALPCAICREDFVVGESARRLPCNHLYHNDCIIPWLT 128
Query: 224 LHNSCPVCRYELPTDDAD 241
HNSCP+CR ELP ++
Sbjct: 129 SHNSCPLCRVELPVASSE 146
>AT5G02750.1 | Symbols: | RING/U-box superfamily protein |
chr5:620101-620952 FORWARD LENGTH=283
Length = 283
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 38/51 (74%)
Query: 190 QCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYELPTDDA 240
+C +C++E +G V +MPC+H +H +C+LPWL N+CP CR++LPTDD
Sbjct: 213 ECVICKEEMSEGRDVCEMPCQHFFHWKCILPWLSKKNTCPFCRFQLPTDDV 263
>AT2G29840.1 | Symbols: | RING/U-box superfamily protein |
chr2:12732387-12733983 REVERSE LENGTH=293
Length = 293
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 144 PGLEQLIQQLAENDPNRYGTPPASKDAIEKLPTVTVDDEL-LSSELNQCAVCQDEFEKGT 202
P EQ++Q + N+ N PASK A+E L T + E C++C +EF+ G
Sbjct: 197 PQFEQVLQ-ASFNETNTARLKPASKLAVESLNRKTYKKASDVVGENEMCSICLEEFDDGR 255
Query: 203 QVKQMPCKHVYHDECLLPWLQLHNSCPVCRYELPTDD 239
+ +PC H + DEC L W + ++ CP+CR++LP +D
Sbjct: 256 SIVALPCGHEFDDECALKWFETNHDCPLCRFKLPCED 292
>AT1G18760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:6471150-6471824 REVERSE LENGTH=224
Length = 224
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 157 DPNRYGTPPASKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMPCKHVYHDE 216
+ N PA+K + L S+E +C +C +EF GT+V +PC H + DE
Sbjct: 143 ETNNISLRPANKLVVNSLARKIYKKTTSSTE--RCTICLEEFNDGTKVMTLPCGHEFDDE 200
Query: 217 CLLPWLQLHNSCPVCRYELPTDD 239
C+L W + ++ CP+CR++LP +D
Sbjct: 201 CVLTWFETNHDCPLCRFKLPCED 223
>AT2G03000.1 | Symbols: | RING/U-box superfamily protein |
chr2:875233-877207 FORWARD LENGTH=535
Length = 535
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 165 PASKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQL 224
PA+ A+ LP V + ++ +C +C +E+ K ++PCKH YH EC+ WL++
Sbjct: 461 PATIRAVAMLPRVAMVEK------GECVICFEEWSKSDMETELPCKHKYHLECVEKWLKI 514
Query: 225 HNSCPVCRYEL 235
H SCP CRY+L
Sbjct: 515 HTSCPQCRYKL 525
>AT1G18770.1 | Symbols: | RING/U-box superfamily protein |
chr1:6473370-6474048 REVERSE LENGTH=106
Length = 106
Score = 66.2 bits (160), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 161 YGTPPASKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLP 220
Y PASK ++ L + SS C +C +EF +G +V +PC H + DEC+L
Sbjct: 30 YNPTPASKLVVKSLAR-KIYKMTTSSTGEMCIICLEEFSEGRRVVTLPCGHDFDDECVLK 88
Query: 221 WLQLHNSCPVCRYELP 236
W + ++SCP+CR++LP
Sbjct: 89 WFETNHSCPLCRFKLP 104
>AT3G30460.1 | Symbols: | RING/U-box superfamily protein |
chr3:12104433-12104876 FORWARD LENGTH=147
Length = 147
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 169 DAIEKLPTVT-VDDELLSSELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNS 227
+A E+LP V +E++ L CA+C++E ++ ++PC+H YH EC+ WL N+
Sbjct: 74 NAGEELPVVEFTAEEMMERGLVVCAICREELAANERLSELPCRHYYHKECISNWLSNRNT 133
Query: 228 CPVCRY--ELPT 237
CP+CR+ ELP
Sbjct: 134 CPLCRHNVELPN 145
>AT3G13228.1 | Symbols: | RING/U-box superfamily protein |
chr3:4267075-4268052 FORWARD LENGTH=325
Length = 325
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 60/114 (52%), Gaps = 8/114 (7%)
Query: 129 PGLRLPANLGDYFLGPGLEQLIQ---QLAENDPNRYGTPPASKDAIEKLPTVTVDDELLS 185
PG L +L +L P E I+ Q++ ++ + PASK ++ L D +
Sbjct: 215 PGCALQVSL---YLFPHDETDIEEAVQVSFDETTNFCLGPASKLVVKSLTRKIYDKINYT 271
Query: 186 SELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYELPTDD 239
E +C +C +EF G + +PC H + DEC + W + ++ CP+CRYELP ++
Sbjct: 272 GE--RCTICLEEFNAGGILVALPCGHDFDDECAVKWFETNHFCPLCRYELPREE 323
>AT5G66070.2 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=245
Length = 245
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 167 SKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLH 225
+ D++ ++P V + D S E+ C+VC +F+ G V+ +P C H++H C+ WL+ H
Sbjct: 178 TGDSLNRIPKVRITDT--SPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRH 235
Query: 226 NSCPVCRYEL 235
SCP+CR L
Sbjct: 236 ASCPLCRRHL 245
>AT5G66070.1 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=221
Length = 221
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 167 SKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLH 225
+ D++ ++P V + D S E+ C+VC +F+ G V+ +P C H++H C+ WL+ H
Sbjct: 154 TGDSLNRIPKVRITDT--SPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRH 211
Query: 226 NSCPVCRYEL 235
SCP+CR L
Sbjct: 212 ASCPLCRRHL 221
>AT3G58720.1 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717892 REVERSE LENGTH=238
Length = 238
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 190 QCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRY 233
+C+VC ++FE V PCKH++H+EC++PWL+ CPVCR+
Sbjct: 143 RCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCRF 186
>AT3G58720.2 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717908 REVERSE LENGTH=266
Length = 266
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 190 QCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRY 233
+C+VC ++FE V PCKH++H+EC++PWL+ CPVCR+
Sbjct: 171 RCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCRF 214
>AT5G52140.1 | Symbols: | RING/U-box superfamily protein |
chr5:21184566-21186872 REVERSE LENGTH=280
Length = 280
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
Query: 137 LGDYF--LGPGLEQLIQQLAENDPNRYGTPPASKDAIEKLPTVTVDDELLSSELNQCAVC 194
LGD +G GL Q ++++ ++YGT S + DD +QC++C
Sbjct: 187 LGDSVGDVGKGLSQ--ERISRLRTHKYGTKTKSWYCLHMKKKFVADD-------SQCSIC 237
Query: 195 QDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYEL 235
E+ KG ++ +PCKH+YH +C+ WL+ + C +C+ E+
Sbjct: 238 LMEYAKGDKITTLPCKHIYHKDCISQWLKQNKVCCICKAEV 278
>AT1G49850.1 | Symbols: | RING/U-box superfamily protein |
chr1:18455326-18456444 REVERSE LENGTH=250
Length = 250
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 167 SKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHN 226
++DAI L T + SE+ C++C + F KG + +PC H +H CL PWL+
Sbjct: 179 TQDAINCLHRQTFSSAEVKSEMRDCSICLESFTKGDMLISLPCTHSFHSSCLNPWLRACG 238
Query: 227 SCPVCRYELPTD 238
CP CR + +
Sbjct: 239 DCPCCRRAIAKE 250
>AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 |
chr2:7704142-7705312 FORWARD LENGTH=241
Length = 241
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 162 GTPPASKDAIEKLPTVTV---DDELLSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDEC 217
G+ + D +EK+P +T+ ++ S + C+VC +F+ G V+ +P C H++H C
Sbjct: 164 GSKGLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRSLPHCHHMFHLPC 223
Query: 218 LLPWLQLHNSCPVCRYEL 235
+ WL H SCP+CR ++
Sbjct: 224 IDNWLLRHGSCPMCRRDI 241
>AT3G14970.1 | Symbols: | RING/U-box superfamily protein |
chr3:5039071-5039733 REVERSE LENGTH=220
Length = 220
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 160 RYGTPPASKDAIEK-LPTVTVDDELLSSELNQCAVCQDEFEKGTQVK--QMPCKHVYHDE 216
R PAS +A+E+ L TV V++E + C +C D+ G V +MPC HV+H
Sbjct: 146 RLAVAPASNEAVEQHLETVVVENE------SWCVICMDKIRIGLDVAAGRMPCSHVFHRT 199
Query: 217 CLLPWLQLHNSCPVCRYELPT 237
C WL+ CPVCR PT
Sbjct: 200 CGEDWLRCSGICPVCRAMFPT 220
>AT1G18780.1 | Symbols: | RING/U-box superfamily protein |
chr1:6476258-6477235 REVERSE LENGTH=325
Length = 325
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 152 QLAENDPNRYGTPPASKDAIEKLPTVTVDDEL-LSSELNQCAVCQDEFEKGTQVKQMPCK 210
Q++ N+ N PASK + L T + E + C +C +EF+ G + +PC
Sbjct: 237 QVSFNETNTVRLKPASKLTVGALNRKTYKKASGVVCENDVCTICLEEFDDGRSIVTLPCG 296
Query: 211 HVYHDECLLPWLQLHNSCPVCRYELP 236
H + +EC+L W + CP+CR ELP
Sbjct: 297 HEFDEECVLEWFVRSHVCPLCRLELP 322
>AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 167 SKDAIEKLPTVTVDDELLSSELN---QCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQ 223
S++ IE LPT + S +C +CQ +++ G + +PCKHVYH EC+ WL
Sbjct: 170 SQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLS 229
Query: 224 LHNSCPVCRYEL 235
++ CPVC E+
Sbjct: 230 INKVCPVCNSEV 241
>AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 167 SKDAIEKLPTVTVDDELLSSELN---QCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQ 223
S++ IE LPT + S +C +CQ +++ G + +PCKHVYH EC+ WL
Sbjct: 170 SQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLS 229
Query: 224 LHNSCPVCRYEL 235
++ CPVC E+
Sbjct: 230 INKVCPVCNSEV 241
>AT1G74620.1 | Symbols: | RING/U-box superfamily protein |
chr1:28028252-28029001 FORWARD LENGTH=249
Length = 249
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 182 ELLSSELNQCAVCQDEFEKGTQ-VKQMPCKHVYHDECLLPWLQLHNSCPVCRYELPTD 238
+ ++E N CA+C +++ +G+ V ++PC H +H +C+ WLQL++ CP+CR +P D
Sbjct: 174 NVATTEENGCAICMEDYIEGSSIVAKLPCDHEFHGDCINKWLQLNHMCPLCRSSIPKD 231
>AT5G53910.1 | Symbols: | RING/U-box superfamily protein |
chr5:21890643-21891335 FORWARD LENGTH=230
Length = 230
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%)
Query: 182 ELLSSELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYELPTDD 239
E SS +CA+C EF+ G +V + C H + ++C++ W ++ +CP+CR+ELP +D
Sbjct: 163 ETYSSGEYKCAICFQEFKTGREVATLLCGHEFDNKCIMEWFKVRYNCPLCRFELPRED 220
>AT1G21960.1 | Symbols: | RING/U-box superfamily protein |
chr1:7725972-7726586 FORWARD LENGTH=204
Length = 204
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 150 IQQLAENDPNRYGTPPASKDAIEKLPTVTVDDELLS-SELNQCAVCQDEFEKGTQVKQMP 208
I E N PA+K +++L + + S S+ + C +C +EFEKG V +P
Sbjct: 116 IDSFDETTNNIELIRPANKLVVDRLARKVYNKKKKSNSDASVCTICLEEFEKGEIVVTLP 175
Query: 209 CKHVYHDECLLPWLQLHNSCPVCRYELP 236
C H + D C+ W + CP+CR+ELP
Sbjct: 176 CGHEFDDGCIGKWFLKDHVCPLCRFELP 203
>AT4G10150.1 | Symbols: | RING/U-box superfamily protein |
chr4:6328136-6329558 FORWARD LENGTH=236
Length = 236
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 167 SKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLH 225
SKD E LP V + + + +QC+VC +++ +++QMP C H +H EC+ WL H
Sbjct: 88 SKDIREMLPVVIYKESFIVKD-SQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSH 146
Query: 226 NSCPVCRYEL 235
+CP+CR L
Sbjct: 147 TTCPLCRLSL 156
>AT1G74410.1 | Symbols: | RING/U-box superfamily protein |
chr1:27965723-27967681 FORWARD LENGTH=223
Length = 223
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 155 ENDPNRYGTPPA---SKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMP-CK 210
E + YG A S D++ KLP + E++ ++ C +C + + G + +P C
Sbjct: 137 EEREDVYGELEARGLSGDSLRKLPCYIMSSEMVRRQVTHCTICLQDIKTGEITRSLPKCD 196
Query: 211 HVYHDECLLPWLQLHNSCPVCR 232
H +H C+ WL H SCP+CR
Sbjct: 197 HTFHLVCVDKWLIRHGSCPICR 218
>AT4G10160.1 | Symbols: | RING/U-box superfamily protein |
chr4:6336023-6337301 FORWARD LENGTH=225
Length = 225
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 167 SKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLH 225
SKD E LP V + ++ QC+VC +++ +++QMP C H +H EC+ WL H
Sbjct: 74 SKDIREMLPIVIYKESFTVND-TQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSH 132
Query: 226 NSCPVCRYEL-PTDDADYENRS 246
+CP+CR L P D ++S
Sbjct: 133 TTCPLCRLSLIPKPSVDLSHQS 154
>AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 |
chr3:17713367-17716051 REVERSE LENGTH=358
Length = 358
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 143 GPGLEQLIQQLAENDPNRYGTPP---ASKDAIEKLPTVTVDDELLSSELNQCAVCQDEFE 199
G + + Q A P Y TP A + I++LP + + + + +C +C +EF
Sbjct: 186 GQEMRGISQDAATYHPGLYLTPAQTEAVEALIQELPKFRL--KAVPDDCGECLICLEEFH 243
Query: 200 KGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCR 232
G +V+ +PC H +H EC+ WL+L+ CP CR
Sbjct: 244 IGHEVRGLPCAHNFHVECIDQWLRLNVKCPRCR 276
>AT4G31450.1 | Symbols: | RING/U-box superfamily protein |
chr4:15255955-15257977 REVERSE LENGTH=497
Length = 497
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 161 YGTPPASKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLP 220
Y P S +I K P+ +D +C++CQ+E+ G +V ++ C+H YH +C+
Sbjct: 425 YQMKPLSYGSITKSPSDNKEDA-------KCSICQEEYTIGDEVGRLHCEHTYHVKCVQE 477
Query: 221 WLQLHNSCPVCRYELPT 237
WL++ + CP+C+ T
Sbjct: 478 WLRIKSWCPICKATAET 494
>AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein |
chr3:1477377-1478573 FORWARD LENGTH=398
Length = 398
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 171 IEKLPTVTVDD----ELLSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLH 225
+E PT D +L EL +CA+C +EFE ++ +P C HV+H C+ WL+ H
Sbjct: 105 VETFPTFLYSDVKTQKLGKGEL-ECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAH 163
Query: 226 NSCPVCRYELPTDDADYEN 244
+CPVCR L A+ E+
Sbjct: 164 VTCPVCRANLAEQVAEGES 182
>AT5G24870.2 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 190 QCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCR 232
+C++CQ+E+ G +V +PC+H YH C WL++ N CP+C+
Sbjct: 467 KCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICK 509
>AT5G24870.1 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 190 QCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCR 232
+C++CQ+E+ G +V +PC+H YH C WL++ N CP+C+
Sbjct: 467 KCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICK 509
>AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive 1
| chr5:9684119-9685225 FORWARD LENGTH=368
Length = 368
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 169 DAIEKLPTVT---VDDELLSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQL 224
+ IE PT V + + +CA+C +EFE ++ +P C HV+H C+ WLQ
Sbjct: 99 ETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQG 158
Query: 225 HNSCPVCRYEL 235
H +CPVCR L
Sbjct: 159 HVTCPVCRTNL 169
>AT5G10650.2 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 32/43 (74%)
Query: 190 QCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCR 232
+C++CQ+E+ G ++ +PC+H+YH C+ WL++ N CP+C+
Sbjct: 474 KCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPICK 516
>AT5G10650.1 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 32/43 (74%)
Query: 190 QCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCR 232
+C++CQ+E+ G ++ +PC+H+YH C+ WL++ N CP+C+
Sbjct: 474 KCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPICK 516
>AT5G06490.1 | Symbols: | RING/U-box superfamily protein |
chr5:1977996-1978589 REVERSE LENGTH=197
Length = 197
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 142 LGPGLEQLIQQLAENDPNRYGTPPASKDAIEKLPTVTVDDELLSSELNQ-------CAVC 194
L PG E+ + E+D +++ I+ P + ++ +S L + C++C
Sbjct: 73 LPPGQERFDFEDDESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSIC 132
Query: 195 QDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHNSCPVCR 232
+++K ++ +P C H++HD C+ PWL+LH +CPVCR
Sbjct: 133 LADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCR 171
>AT2G15580.1 | Symbols: | RING/U-box superfamily protein |
chr2:6797687-6798815 FORWARD LENGTH=196
Length = 196
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 187 ELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYEL 235
E CA+C D F+KG + +PC H +H CLLPWL + CP CR ++
Sbjct: 146 EQQDCAICLDRFKKGETLVHLPCAHKFHSICLLPWLDTNVYCPYCRTDI 194
>AT4G35840.1 | Symbols: | RING/U-box superfamily protein |
chr4:16981083-16982266 FORWARD LENGTH=236
Length = 236
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 162 GTPPASKDAIEKLPTVTVDDEL---LSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDEC 217
G+ + D ++K+P + + + S + C+VC +F+ G V+ +P C H++H C
Sbjct: 159 GSKGLTGDLVDKIPKIKITGKNNLDASGNKDSCSVCLQDFQLGETVRSLPHCHHMFHLPC 218
Query: 218 LLPWLQLHNSCPVCRYEL 235
+ WL H SCP+CR +L
Sbjct: 219 IDNWLFRHGSCPMCRRDL 236
>AT5G36001.1 | Symbols: | RING/U-box superfamily protein |
chr5:14142050-14143143 FORWARD LENGTH=322
Length = 322
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 191 CAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHNSCPVCR 232
C +C E+ VK +P C+H +H EC+ PWL+LHNSCPVCR
Sbjct: 264 CPICLSEYTSEETVKCLPECEHCFHTECIDPWLKLHNSCPVCR 306
>AT3G61180.1 | Symbols: | RING/U-box superfamily protein |
chr3:22645680-22647290 FORWARD LENGTH=379
Length = 379
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 42/62 (67%)
Query: 174 LPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRY 233
L T + + +L SE +C++C +E G +++++PC+H +H C+ WL+++ +CP+C++
Sbjct: 306 LDTESQTERMLLSEDAECSICLCAYEDGVELRELPCRHHFHSLCVDKWLRINATCPLCKF 365
Query: 234 EL 235
+
Sbjct: 366 NI 367
>AT5G01880.1 | Symbols: | RING/U-box superfamily protein |
chr5:339017-339496 FORWARD LENGTH=159
Length = 159
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 168 KDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHN 226
K ++K P + +CA+C EF G +V+ +P C H +H C+ WL H+
Sbjct: 82 KRELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHS 141
Query: 227 SCPVCRYEL 235
SCP CR+ L
Sbjct: 142 SCPNCRHSL 150
>AT4G32600.1 | Symbols: | RING/U-box superfamily protein |
chr4:15724010-15725737 FORWARD LENGTH=453
Length = 453
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 40/64 (62%)
Query: 178 TVDDELLSSELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYELPT 237
T ++ +S E C +C ++ +++++PC H +H EC+ WL+++ SCP+C+ E+
Sbjct: 350 TDNERAISGEDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCKSEVGE 409
Query: 238 DDAD 241
++D
Sbjct: 410 KNSD 413
>AT1G72200.1 | Symbols: | RING/U-box superfamily protein |
chr1:27169935-27171149 REVERSE LENGTH=404
Length = 404
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 171 IEKLPTV---TVDDELLSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHN 226
IE PT TV + E +C+VC +EFE ++ +P C HV+H C+ WL+ H
Sbjct: 121 IETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHT 180
Query: 227 SCPVCRYEL 235
+CP+CR +L
Sbjct: 181 TCPLCRADL 189
>AT5G45290.1 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=545
Length = 545
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 162 GTPPASKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPW 221
G+ PA D ++ LP + + + S + +QC +C E+E+ ++ +PC H +H C+ W
Sbjct: 462 GSVPAPNDVVDLLP-IKLYTKSQSEDPSQCYICLVEYEEADSIRTLPCHHEFHKTCVDKW 520
Query: 222 LQ-LHNSCPVCRYELPTDDADYE 243
L+ +H CP+CR ++ D E
Sbjct: 521 LKEIHRVCPLCRGDICRHDPSSE 543
>AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein |
chr5:1746938-1747999 FORWARD LENGTH=353
Length = 353
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 168 KDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHN 226
+ IE LP + +CAVC FE ++ +P CKH +H EC+ WL H+
Sbjct: 69 RSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHS 128
Query: 227 SCPVCRYELPTDD 239
+CP+CRY + +D
Sbjct: 129 TCPLCRYRVDPED 141
>AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogenesis
| chr2:324499-325895 FORWARD LENGTH=359
Length = 359
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%)
Query: 181 DELLSSELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYELPTDDA 240
+ L +E C +C +E G ++ +PC H +H C++ WL++ +CP+C+Y +
Sbjct: 297 ERTLLAEDADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNILKGTT 356
Query: 241 D 241
D
Sbjct: 357 D 357
>AT3G19910.1 | Symbols: | RING/U-box superfamily protein |
chr3:6926497-6929324 FORWARD LENGTH=340
Length = 340
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 167 SKDAIEKLPTVTVDDELLSSELNQ-CAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLH 225
S D I LP+ + + N+ C +C+ ++E + +PCKH YH EC+ WL+++
Sbjct: 263 SADTIASLPSKRYKEGDNQNGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNWLKIN 322
Query: 226 NSCPVCRYELPT 237
CPVC E+ T
Sbjct: 323 KVCPVCSAEVST 334
>AT5G42200.1 | Symbols: | RING/U-box superfamily protein |
chr5:16860523-16861014 FORWARD LENGTH=163
Length = 163
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 171 IEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHNSCP 229
+EK+P +T + + + +CAVC ++ E G + +P C H +H C WL H CP
Sbjct: 84 LEKIPKLTGRELAVIARSTECAVCLEDIESGQSTRLVPGCNHGFHQLCADTWLSNHTVCP 143
Query: 230 VCRYEL-PTDDADYENRS 246
VCR EL P EN+S
Sbjct: 144 VCRAELAPNLPQCNENQS 161
>AT1G15100.1 | Symbols: RHA2A | RING-H2 finger A2A |
chr1:5193703-5194170 REVERSE LENGTH=155
Length = 155
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 191 CAVCQDEFEKGTQVKQMPCKHVYHDECLLPWL-QLHNSCPVCRYELPTDD 239
C VC + ++G +V+++ C+HV+H +CL WL Q + +CP+CR L +DD
Sbjct: 86 CVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQFNFTCPLCRSALVSDD 135
>AT4G26580.2 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 166 ASKDAIEKLPTVT---VDDELLSSELN---QCAVCQDEFEKGTQVKQMPCKHVYHDECLL 219
AS D I LP+ +D+ SS+ N +C +C ++++ +V+++PC H +H +C+
Sbjct: 258 ASDDQISSLPSWKYKLIDETSDSSQANNDPECCICLAKYKEKEEVRKLPCSHRFHLKCVD 317
Query: 220 PWLQLHNSCPVCRYELP 236
WL++ + CP+C+ +LP
Sbjct: 318 QWLRIISCCPLCKQDLP 334
>AT4G26580.1 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 166 ASKDAIEKLPTVT---VDDELLSSELN---QCAVCQDEFEKGTQVKQMPCKHVYHDECLL 219
AS D I LP+ +D+ SS+ N +C +C ++++ +V+++PC H +H +C+
Sbjct: 258 ASDDQISSLPSWKYKLIDETSDSSQANNDPECCICLAKYKEKEEVRKLPCSHRFHLKCVD 317
Query: 220 PWLQLHNSCPVCRYELP 236
WL++ + CP+C+ +LP
Sbjct: 318 QWLRIISCCPLCKQDLP 334
>AT1G49230.1 | Symbols: | RING/U-box superfamily protein |
chr1:18209320-18209979 FORWARD LENGTH=219
Length = 219
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 155 ENDPNRYGTPPASKDAIEKLPTVTVDDEL-LSSELNQCAVCQDEFEKGTQVKQMP-CKHV 212
+N P R + A++ TV+ EL L +CA+C EF +VK +P C H
Sbjct: 94 DNYPVRLTNTGVKRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHG 153
Query: 213 YHDECLLPWLQLHNSCPVCRYEL 235
+H C+ WL H+SCP CR+ L
Sbjct: 154 FHVRCIDKWLSSHSSCPTCRHCL 176
>AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 |
chr3:5692880-5693794 FORWARD LENGTH=304
Length = 304
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 169 DAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHNS 227
+ I+ LP T DE + +CAVC EFE+ + +P C+H +H +C+ W H++
Sbjct: 98 NVIKSLPVFTFSDETHKDPI-ECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHST 156
Query: 228 CPVCR 232
CP+CR
Sbjct: 157 CPLCR 161
>AT1G80400.1 | Symbols: | RING/U-box superfamily protein |
chr1:30225864-30227360 FORWARD LENGTH=407
Length = 407
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%)
Query: 182 ELLSSELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYEL 235
L+S E C +C + QV+++PC HV+H +C+ WL+++ +CP+C+ E+
Sbjct: 346 RLISGEDASCCICLTRYGDDEQVRELPCSHVFHVDCVDKWLKINATCPLCKNEV 399
>AT4G05350.1 | Symbols: | RING/U-box superfamily protein |
chr4:2726910-2727530 REVERSE LENGTH=206
Length = 206
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 184 LSSELNQCAVCQDEFEKGTQ---VKQMPCKHVYHDECLLPWLQLHNSCPVCRYEL 235
L E C++C + G + V +M C HV+H+ CLL WL+ N+CP+CR E+
Sbjct: 150 LKMETEPCSICLESLVSGPKPRDVTRMTCSHVFHNGCLLEWLKRKNTCPLCRTEI 204
>AT1G04790.1 | Symbols: | RING/U-box superfamily protein |
chr1:1345469-1348143 FORWARD LENGTH=634
Length = 634
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 148 QLIQQLAENDPNRYGTPPASKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQM 207
+L+ L EN+ +R+G AS + I LP TV + C +C + + G ++ +
Sbjct: 552 ELLLALDENN-HRHGG--ASANRINNLPESTVQTDNFQE---TCVICLETPKIGDTIRHL 605
Query: 208 PCKHVYHDECLLPWLQLHNSCPVCRYEL 235
PC H +H +C+ PWL SCPVC+ +
Sbjct: 606 PCLHKFHKDCIDPWLGRSKSCPVCKSSV 633
>AT4G12190.1 | Symbols: | RING/U-box superfamily protein |
chr4:7278545-7278760 REVERSE LENGTH=71
Length = 71
Score = 53.5 bits (127), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 184 LSSELNQCAVCQDEFEKGTQ---VKQMPCKHVYHDECLLPWLQLHNSCPVCRYEL 235
L E C++C + G + + +M C HV+H+ CLL WL+ N+CP+CR EL
Sbjct: 15 LKMETEPCSICLESLVSGPKPRDITRMTCSHVFHNGCLLEWLKRKNTCPLCRTEL 69
>AT1G17970.1 | Symbols: | RING/U-box superfamily protein |
chr1:6185032-6187202 FORWARD LENGTH=368
Length = 368
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 190 QCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCR 232
+C++CQDE+E+ +V ++ C H +H C+ WL N+CPVC+
Sbjct: 319 KCSICQDEYEREDEVGELNCGHSFHVHCVKQWLSRKNACPVCK 361
>AT1G33480.1 | Symbols: | RING/U-box superfamily protein |
chr1:12148758-12150121 REVERSE LENGTH=261
Length = 261
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 167 SKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLH 225
SK+ E LP V + + +QC+VC +++ +++Q+P CKH +H +C+ WL H
Sbjct: 77 SKELREMLPIVVFKESFTVMD-SQCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLTSH 135
Query: 226 NSCPVCRYEL 235
+CP+CR L
Sbjct: 136 TTCPLCRLAL 145
>AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446878 FORWARD LENGTH=310
Length = 310
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 171 IEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWL-QLHNSCP 229
+ LP T D CA+C +++ G ++ +PC+H +H C+ WL + SCP
Sbjct: 212 VHTLPCFTFTDSAHHKAGETCAICLEDYRFGESLRLLPCQHAFHLNCIDSWLTKWGTSCP 271
Query: 230 VCRYELPTDDADYE 243
VC++++ T+ E
Sbjct: 272 VCKHDIRTETMSSE 285
>AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVERSE
LENGTH=257
Length = 257
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 165 PASKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQ 223
P +EK+P + S L +C+VC EFE+ + + +P C HV+H +C+ W +
Sbjct: 87 PLDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFR 146
Query: 224 LHNSCPVCR 232
+SCP+CR
Sbjct: 147 SRSSCPLCR 155
>AT5G66160.2 | Symbols: RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446722 FORWARD LENGTH=290
Length = 290
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 171 IEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWL-QLHNSCP 229
+ LP T D CA+C +++ G ++ +PC+H +H C+ WL + SCP
Sbjct: 212 VHTLPCFTFTDSAHHKAGETCAICLEDYRFGESLRLLPCQHAFHLNCIDSWLTKWGTSCP 271
Query: 230 VCRYELPTDDADYE 243
VC++++ T+ E
Sbjct: 272 VCKHDIRTETMSSE 285
>AT1G35330.1 | Symbols: | RING/U-box superfamily protein |
chr1:12965046-12966113 FORWARD LENGTH=327
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 190 QCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHNSCPVCRYELPTDDADYEN 244
+CA+C +EFE ++ MP C H +H C+ WL ++CPVCR LP +N
Sbjct: 127 ECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASLPPKPGSDQN 182
>AT1G20823.1 | Symbols: | RING/U-box superfamily protein |
chr1:7238880-7239473 FORWARD LENGTH=197
Length = 197
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 168 KDAIEKLPTVTVDDELLSSE-LNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLH 225
K ++ LP +T E SE +CA+C EF G +++ +P C H +H C+ WL H
Sbjct: 87 KKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSH 146
Query: 226 NSCPVCRYEL 235
+SCP CR L
Sbjct: 147 SSCPSCRQIL 156
>AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:25515412-25516767 REVERSE
LENGTH=343
Length = 343
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 35/56 (62%)
Query: 180 DDELLSSELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYEL 235
++ +L E C +C +E G ++ +PC H +H C++ WL+++ +CP+C++ +
Sbjct: 281 NERVLLPEDADCCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCPLCKFNI 336
>AT2G42360.1 | Symbols: | RING/U-box superfamily protein |
chr2:17640907-17641617 FORWARD LENGTH=236
Length = 236
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 171 IEKLPTVTV-DDELLSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHNSC 228
I LPT TV + +++ +CAVC ++ + +++P CKH++H +C+ WL ++C
Sbjct: 87 IASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTC 146
Query: 229 PVCRYEL 235
PVCR E+
Sbjct: 147 PVCRTEV 153
>AT4G24015.1 | Symbols: | RING/U-box superfamily protein |
chr4:12469887-12471197 REVERSE LENGTH=174
Length = 174
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 172 EKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHNSCPV 230
+KL V ++EL + + + C VC EFE ++ +MP CKH++H +C+ WL HN+CP+
Sbjct: 87 DKLHVVLFNEELGTRD-SLCCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLYSHNTCPL 145
Query: 231 CR 232
CR
Sbjct: 146 CR 147
>AT5G47610.1 | Symbols: | RING/U-box superfamily protein |
chr5:19301399-19301899 REVERSE LENGTH=166
Length = 166
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 141 FLGPGLEQLIQQLAENDPNRYGTPPASKDAIEKLPTVTVDDEL-LSSELNQCAVCQDEFE 199
FL P LE + + P A+ + PT+ +L L+ +CA+C EFE
Sbjct: 64 FLRPTLE--------TEDDHKPDPEAAASSTPTTPTLVYSSDLELAGAEAECAICLSEFE 115
Query: 200 KGTQVKQM-PCKHVYHDECLLPWLQLHNSCPVCRYEL 235
+G ++ + C+H +H +C+ WL +SCP CR +
Sbjct: 116 QGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCRTSI 152
>AT1G49200.1 | Symbols: | RING/U-box superfamily protein |
chr1:18198298-18198978 FORWARD LENGTH=226
Length = 226
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 167 SKDAIEKLPTVTVDDEL-LSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQL 224
+K A+ P V+ E+ L +C +C +F G Q++ +P C H +H C+ WLQ
Sbjct: 111 NKKALRMFPVVSYSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQ 170
Query: 225 HNSCPVCRYEL 235
H +CP CR+ L
Sbjct: 171 HLTCPKCRHCL 181
>AT3G15740.1 | Symbols: | RING/U-box superfamily protein |
chr3:5333879-5334553 REVERSE LENGTH=224
Length = 224
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 162 GTPPASKDAIE-KLPTVTVDDELLSSELNQCAVCQDEFEKGTQVK--QMPCKHVYHDECL 218
PA+ +A+E L T+ V++E C +C D G+ V+ +MPC HV+H C
Sbjct: 152 AVAPANDEAVEMHLETLVVENE------GYCVICMDNIRVGSDVEAGRMPCSHVFHRTCG 205
Query: 219 LPWLQLHNSCPVCRYELPT 237
WL+ CPVCR P
Sbjct: 206 EEWLRNSGICPVCRALFPA 224
>AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr4:7053737-7055516 REVERSE LENGTH=390
Length = 390
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 35/52 (67%)
Query: 184 LSSELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYEL 235
LS E +C +C E+E G +++++PC H +H C+ WL +++ CP+C++ +
Sbjct: 331 LSPEDAECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCKFNI 382
>AT4G40070.1 | Symbols: | RING/U-box superfamily protein |
chr4:18576533-18577504 FORWARD LENGTH=323
Length = 323
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 17/113 (15%)
Query: 140 YFLGPGLEQLIQQLAENDPN---RYGTPPASKDA----------IEKLPTV---TVDDEL 183
+FL L I+ A ++P+ RY A+ + +E P +V +
Sbjct: 57 FFLTGLLSVYIRHCARSNPDSSTRYFRNRANDGSSRRGGLDNAVVESFPVFAYSSVKESK 116
Query: 184 LSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHNSCPVCRYEL 235
+ S+ +CA+C +E E V+ +P C H++H +C+ WL H +CPVCR L
Sbjct: 117 IGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNL 169
>AT3G10910.1 | Symbols: | RING/U-box superfamily protein |
chr3:3413068-3413613 REVERSE LENGTH=181
Length = 181
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 168 KDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHN 226
K A++++P ++ + +C +C +FE G +V+ +P C H +H C+ WL +
Sbjct: 91 KQALKQIPVGLYGSGIIDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRS 150
Query: 227 SCPVCRYEL 235
SCP CR L
Sbjct: 151 SCPTCRQSL 159
>AT2G35420.1 | Symbols: | RING/U-box superfamily protein |
chr2:14899715-14900479 REVERSE LENGTH=254
Length = 254
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
Query: 150 IQQLAENDPNRYGTPPASKD----AIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVK 205
+Q+ D TPP + I P + +CA+C EF V+
Sbjct: 58 LQRTPYGDLIHVATPPENTGLDPFIIRSFPVFHYSSATKKNHGTECAICLSEFSDEDTVR 117
Query: 206 QMP-CKHVYHDECLLPWLQLHNSCPVCRYEL 235
+ C+H +H C+ W +LH +CPVCR EL
Sbjct: 118 LITVCRHPFHSNCIDLWFELHKTCPVCRCEL 148
>AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348728-4350512 FORWARD LENGTH=408
Length = 408
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 190 QCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYE-LPTDDADYE 243
+C +C +E GT+++++PC H +H C+ WL ++ +CP+C+Y L + + D E
Sbjct: 352 ECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNILKSSNLDRE 406
>AT1G73760.1 | Symbols: | RING/U-box superfamily protein |
chr1:27739366-27741161 REVERSE LENGTH=367
Length = 367
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 190 QCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCR 232
+C +CQDE+E +V ++ C H +H +C+ WL NSCPVC+
Sbjct: 318 KCIICQDEYEAKDEVGELRCGHRFHIDCVNQWLVRKNSCPVCK 360
>AT3G18930.2 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 191 CAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHNSCPVCRYEL 235
CAVC EFE+G V+ +P C H +H EC+ WL+ H +CP+CR +
Sbjct: 156 CAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAI 201
>AT3G18930.1 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 191 CAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHNSCPVCRYEL 235
CAVC EFE+G V+ +P C H +H EC+ WL+ H +CP+CR +
Sbjct: 156 CAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAI 201
>AT3G15070.2 | Symbols: | RING/U-box superfamily protein |
chr3:5070472-5072344 REVERSE LENGTH=486
Length = 486
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 187 ELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYE 234
E + C +CQ+ ++ ++ + C H YH ECL WL + N CP+C+ E
Sbjct: 424 ETDSCTICQENYKNEDKIATLDCMHKYHAECLKKWLVIKNVCPICKSE 471
>AT3G15070.1 | Symbols: | RING/U-box superfamily protein |
chr3:5070472-5072344 REVERSE LENGTH=486
Length = 486
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 187 ELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYE 234
E + C +CQ+ ++ ++ + C H YH ECL WL + N CP+C+ E
Sbjct: 424 ETDSCTICQENYKNEDKIATLDCMHKYHAECLKKWLVIKNVCPICKSE 471
>AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zinc
finger (C3HC4-type RING finger) family protein |
chr3:17725410-17727954 REVERSE LENGTH=349
Length = 349
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 168 KDAIEKLPTVTVDDELLSSELN-QCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLH 225
+ AI+ LP + +S E CAVC +EF +++ +P C H +H C+ WL +
Sbjct: 183 QTAIDALPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSN 242
Query: 226 NSCPVCRYELPTDDADYEN 244
++CP+CR L T + Y +
Sbjct: 243 STCPLCRRSLSTSNVCYNH 261
>AT4G12210.1 | Symbols: | RING/U-box superfamily protein |
chr4:7281308-7281919 REVERSE LENGTH=203
Length = 203
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 184 LSSELNQCAVCQDEFEKG---TQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYEL 235
L E C++C + G + + +M C HV+H+ CLL W N+CP+CR EL
Sbjct: 146 LKMETESCSICLENLVSGPKPSDLTRMTCSHVFHNPCLLEWFMRKNTCPLCRTEL 200
>AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348941-4350512 FORWARD LENGTH=337
Length = 337
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 184 LSSELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYE-LPTDDADY 242
L E +C +C +E GT+++++PC H +H C+ WL ++ +CP+C+Y L + + D
Sbjct: 275 LLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNILKSSNLDR 334
Query: 243 E 243
E
Sbjct: 335 E 335
>AT2G35000.1 | Symbols: | RING/U-box superfamily protein |
chr2:14751809-14752945 REVERSE LENGTH=378
Length = 378
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 16/77 (20%)
Query: 169 DAIEKLPTVTVDDELLSSELN---------QCAVCQDEFEKGTQVKQMP-CKHVYHDECL 218
+AIE PT L SE+ +CAVC EFE ++ MP C HV+H +C+
Sbjct: 110 EAIETFPT------FLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCV 163
Query: 219 LPWLQLHNSCPVCRYEL 235
WL H++CP+CR +L
Sbjct: 164 DVWLSEHSTCPLCRADL 180
>AT1G22500.1 | Symbols: | RING/U-box superfamily protein |
chr1:7949581-7950726 FORWARD LENGTH=381
Length = 381
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 12/97 (12%)
Query: 143 GPGLEQLIQQLAENDPNRYGTPPASKDAIEKLPTV---TVDDELLSSELNQCAVCQDEFE 199
GPG ++Q E P IE PT TV + E +C VC +EFE
Sbjct: 75 GPGNWLNVRQTTE--------PGLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFE 126
Query: 200 KGTQVKQMP-CKHVYHDECLLPWLQLHNSCPVCRYEL 235
++ +P C HV+H C+ WL+ +CP+CR L
Sbjct: 127 DDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCRANL 163
>AT5G45290.2 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=546
Length = 546
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 162 GTPPASKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPW 221
G+ PA D ++ LP + + + S + +QC +C E+E+ ++ +PC H +H C+ W
Sbjct: 462 GSVPAPNDVVDLLP-IKLYTKSQSEDPSQCYICLVEYEEADSIRTLPCHHEFHKTCVDKW 520
Query: 222 LQ-LHNS-CPVCRYELPTDDADYE 243
L+ +H+ CP+CR ++ D E
Sbjct: 521 LKEIHSRVCPLCRGDICRHDPSSE 544
>AT4G00305.1 | Symbols: | RING/U-box superfamily protein |
chr4:131550-131930 FORWARD LENGTH=126
Length = 126
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 15/90 (16%)
Query: 161 YGTPPASKDAIEKLPTVTVDDEL-------LSSELN---QCAVCQDEFEKGTQVKQMP-C 209
+G+ + I+K+P +DD L +SS +N C +CQDEF+ G +V+ + C
Sbjct: 34 FGSASSGSTIIDKIP---MDDMLPATKFEDISSRVNPPESCRICQDEFDGGDEVRCLRNC 90
Query: 210 KHVYHDECLLPWLQLHN-SCPVCRYELPTD 238
HVYH C+ W+Q +CP+CR + D
Sbjct: 91 VHVYHKTCIDRWIQDDKMTCPLCRTPIVPD 120
>AT4G11360.1 | Symbols: RHA1B | RING-H2 finger A1B |
chr4:6906066-6906539 FORWARD LENGTH=157
Length = 157
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 151 QQLAENDPNRYGTPPASKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMP-C 209
+ + +DP R ++ A E +P V D LL+ + C VC +F +++Q+P C
Sbjct: 46 NETSRSDPTRLALSTSATLANELIPVVRFSD-LLTDPEDCCTVCLSDFVSDDKIRQLPKC 104
Query: 210 KHVYHDECLLPWLQLHN--SCPVCR 232
HV+H CL W+ N +CP+CR
Sbjct: 105 GHVFHHRCLDRWIVDCNKITCPICR 129
>AT2G25410.1 | Symbols: | RING/U-box superfamily protein |
chr2:10814470-10815917 FORWARD LENGTH=377
Length = 377
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 191 CAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHNSCPVCR 232
C +C E+ V+ +P C+H +H EC+ WL+LH+SCPVCR
Sbjct: 327 CPICLSEYATKETVRCLPECEHCFHTECIDAWLKLHSSCPVCR 369
>AT1G49210.1 | Symbols: | RING/U-box superfamily protein |
chr1:18201994-18202671 FORWARD LENGTH=225
Length = 225
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 168 KDAIEKLPTVTVDDEL-LSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLH 225
K A+ P V+ E+ L +C +C +F G Q++ +P C H +H C+ WLQ H
Sbjct: 111 KKALRMFPVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHH 170
Query: 226 NSCPVCRYEL 235
+CP CR+ L
Sbjct: 171 LTCPKCRHCL 180
>AT5G54990.1 | Symbols: | RING/U-box superfamily protein |
chr5:22317505-22318185 FORWARD LENGTH=226
Length = 226
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 191 CAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYE 234
C +C E G ++PC HV+H +C++ WL+ + SCP+CR +
Sbjct: 174 CPICLTELSSGVSRMKLPCSHVFHRDCIMTWLKKNPSCPICRTK 217
>AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein |
chr1:28668915-28669472 FORWARD LENGTH=185
Length = 185
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 168 KDAIEKLPTVTVD-DELLSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLH 225
K + LP +T D + +L +CA+C EF G +++ +P C H +H C+ WL H
Sbjct: 80 KKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSH 139
Query: 226 NSCPVCRYEL 235
+SCP CR L
Sbjct: 140 SSCPSCRQIL 149
>AT1G53190.2 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 187 ELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYE 234
E C +CQ+ F+ ++ + C H YH ECL WL + N CP+C+ E
Sbjct: 438 ETEPCTICQESFKNEEKIATLDCGHEYHAECLEKWLIVKNVCPICKSE 485
>AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein |
chr1:27226405-27227379 FORWARD LENGTH=324
Length = 324
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 190 QCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHNSCPVCR 232
+C++C E KG + + +P C H +H EC+ W Q H++CP+CR
Sbjct: 126 ECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICR 169
>AT1G53190.1 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 187 ELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYE 234
E C +CQ+ F+ ++ + C H YH ECL WL + N CP+C+ E
Sbjct: 438 ETEPCTICQESFKNEEKIATLDCGHEYHAECLEKWLIVKNVCPICKSE 485
>AT4G09120.1 | Symbols: | RING/U-box superfamily protein |
chr4:5813998-5815035 FORWARD LENGTH=345
Length = 345
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 19/90 (21%)
Query: 168 KDAIEKLPTVTVDDELLSSELN---------QCAVCQDEFEKGTQVKQMP-CKHVYHDEC 217
K+ IE PT L SE+ +CA+C EFE ++ MP C H +H C
Sbjct: 97 KEVIESFPT------FLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANC 150
Query: 218 LLPWLQLHNSCPVCRYEL---PTDDADYEN 244
+ WL ++CPVCR L P + Y N
Sbjct: 151 IDVWLSSWSTCPVCRANLSLKPGESYPYLN 180
>AT2G34990.1 | Symbols: | RING/U-box superfamily protein |
chr2:14750260-14751168 REVERSE LENGTH=302
Length = 302
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 190 QCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHNSCPVCRYEL 235
+CAVC EFE ++ MP C HV+H +C+ WL H++CP+CR +L
Sbjct: 95 ECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDHSTCPLCRVDL 141
>AT2G42350.1 | Symbols: | RING/U-box superfamily protein |
chr2:17639245-17639898 FORWARD LENGTH=217
Length = 217
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 171 IEKLPT--VTVDDELLSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHNS 227
I LPT V + +++ +E CAVC E+ + +P CKHV+H C+ WL ++
Sbjct: 81 IASLPTFVVGIKNDVAGTE---CAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQST 137
Query: 228 CPVCRYE 234
CPVCR E
Sbjct: 138 CPVCRTE 144
>AT2G46160.1 | Symbols: | RING/U-box superfamily protein |
chr2:18963109-18963753 FORWARD LENGTH=214
Length = 214
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 189 NQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHNSCPVCRYE-LPT 237
C++C E+++ ++ MP CKH +H CL WL+L+ SCPVCR LPT
Sbjct: 136 TTCSICLCEYKEAEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPT 186
>AT1G53010.1 | Symbols: | RING/U-box superfamily protein |
chr1:19747847-19748383 FORWARD LENGTH=178
Length = 178
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 180 DDELLSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHNSCPVCRYELP 236
+DE S E +CA+C + + + P C+H+YH C+ WL+ H +CP CR +LP
Sbjct: 119 EDEEKSLESRECAICLSGYVVNEECRVFPVCRHIYHALCIDAWLKNHLTCPTCRKDLP 176
>AT2G35910.1 | Symbols: | RING/U-box superfamily protein |
chr2:15073225-15073878 REVERSE LENGTH=217
Length = 217
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 168 KDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHN 226
+D I+ P + + + + CA+C +++ ++Q+P C H++H +C+ WL+L+
Sbjct: 124 EDTIQSYPKILYSEAKGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLNP 183
Query: 227 SCPVCRYE-LPT 237
+CPVCR LPT
Sbjct: 184 TCPVCRTSPLPT 195
>AT4G28890.1 | Symbols: | RING/U-box superfamily protein |
chr4:14256437-14257735 REVERSE LENGTH=432
Length = 432
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 168 KDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHN 226
K AIE LP S + C+VC +FE ++ +P C+H +H C+ WL+ H
Sbjct: 100 KTAIESLPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHA 159
Query: 227 SCPVCRYELPTDD 239
+CP+CR + ++
Sbjct: 160 TCPLCRDRVSMEE 172
>AT1G65040.2 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24163365 REVERSE LENGTH=460
Length = 460
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 18/112 (16%)
Query: 141 FLGPGL-EQLIQQLAENDPN---------RYGTPPASKDAIEKLPTVTVDDELLSSELNQ 190
F+ GL LI++L E N RY ++ + ++ P T ++ LSS
Sbjct: 236 FMNYGLPLHLIRELYETFRNFKIRVTDYLRYRKITSNMN--DRFPDATPEE--LSSNDAT 291
Query: 191 CAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCR-YELPTDDAD 241
C +C++E T K++ C H++H CL WL+ N+CP CR +P ++A
Sbjct: 292 CIICREEM---TSAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENAT 340
>AT5G67120.1 | Symbols: | RING/U-box superfamily protein |
chr5:26787830-26789737 REVERSE LENGTH=272
Length = 272
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 8/131 (6%)
Query: 105 LQNHLQGLRADGANVQFEVDHPGEPGLRLPANLGDYFLGPGLEQLIQQLAENDPNRYGTP 164
L+ + + N QFE + E P++ GD F E+L+ E R G
Sbjct: 149 LEQYWRNWLQSSTNEQFETESLEE--YTNPSSHGDIFT---YEELLSITDETGDERTG-- 201
Query: 165 PASKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQL 224
S++ I++ ++ E +C +CQ + + +V ++ C H +H C+ WL +
Sbjct: 202 -LSEEVIDENLIRRKYEKRSDDETKRCVICQQKLKDNEEVSKLGCGHDFHFGCIKNWLMV 260
Query: 225 HNSCPVCRYEL 235
N CP+C E+
Sbjct: 261 TNKCPLCNREV 271
>AT4G09130.1 | Symbols: | RING/U-box superfamily protein |
chr4:5815849-5816922 FORWARD LENGTH=357
Length = 357
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 168 KDAIEKLPTVTVDDELLSSELN---QCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQ 223
KD IE P + N +CA+C EFE ++ MP C H +H C+ WL
Sbjct: 94 KDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDEWLS 153
Query: 224 LHNSCPVCRYELPTDDAD 241
++CPVCR L D
Sbjct: 154 SRSTCPVCRANLSLKSGD 171
>AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein |
chr3:20595300-20597188 REVERSE LENGTH=273
Length = 273
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 191 CAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYE 234
C+VC ++ G V+ +PC H +H C+ PWL+ +CPVC++
Sbjct: 211 CSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQGTCPVCKFR 254
>AT3G03550.1 | Symbols: | RING/U-box superfamily protein |
chr3:850391-851461 REVERSE LENGTH=356
Length = 356
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 187 ELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHNSCPVCRYELPTDDA 240
E + C+VC EF++ ++ +P C H +H C+ WL+ H++CP+CR + T A
Sbjct: 155 ESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSA 209
>AT1G65040.3 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24163365 REVERSE LENGTH=389
Length = 389
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 18/112 (16%)
Query: 141 FLGPGLE-QLIQQLAENDPN---------RYGTPPASKDAIEKLPTVTVDDELLSSELNQ 190
F+ GL LI++L E N RY ++ + ++ P T ++ LSS
Sbjct: 165 FMNYGLPLHLIRELYETFRNFKIRVTDYLRYRKITSNMN--DRFPDATPEE--LSSNDAT 220
Query: 191 CAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCR-YELPTDDAD 241
C +C++E T K++ C H++H CL WL+ N+CP CR +P ++A
Sbjct: 221 CIICREEM---TSAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENAT 269
>AT1G49220.1 | Symbols: | RING/U-box superfamily protein |
chr1:18205946-18206701 FORWARD LENGTH=251
Length = 251
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 168 KDAIEKLPTVTVDDELLSSELNQ-CAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLH 225
K A+ P V+ E+ L++ C +C +F G Q++ +P C H +H C+ WLQ H
Sbjct: 111 KKALRMFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQH 170
Query: 226 NSCPVCR 232
+CP CR
Sbjct: 171 LTCPKCR 177
>AT3G47180.1 | Symbols: | RING/U-box superfamily protein |
chr3:17372821-17373453 REVERSE LENGTH=210
Length = 210
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 186 SELNQCAVCQDEFE-KGTQVKQMPCKHVYHDECLLPWLQLHNSCPVC 231
+E+++C VCQ EFE + + V PC H YH EC+ WL+ CP+C
Sbjct: 157 NEIDRCVVCQMEFEERESLVVLRPCDHPYHSECITKWLETKKICPIC 203
>AT5G05280.1 | Symbols: | RING/U-box superfamily protein |
chr5:1565509-1566039 REVERSE LENGTH=176
Length = 176
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 157 DPNRYGTPPASKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHD 215
D N K A++ +P + EL + +C +C +F +G V+ +P C H +H
Sbjct: 80 DTNANVAKGIKKRALKVIPVDSYSPEL-KMKATECLICLGDFVEGETVRVLPKCNHGFHV 138
Query: 216 ECLLPWLQLHNSCPVCRYEL 235
+C+ WL H+SCP CR L
Sbjct: 139 KCIDTWLLSHSSCPTCRQSL 158
>AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr4:6041652-6043681 REVERSE
LENGTH=448
Length = 448
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 168 KDAIEKLPTVTVD---DELLSSELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWL-Q 223
K I ++PT + DE +S L C +C + +EKG +++ +PC H +H C+ WL Q
Sbjct: 210 KSMIIRMPTTIFNGICDEATTSIL--CCICLENYEKGDKLRILPCHHKFHVACVDLWLGQ 267
Query: 224 LHNSCPVCRYELPTDDAD 241
+ CPVC+ + + D
Sbjct: 268 RKSFCPVCKRDARSISTD 285
>AT2G01150.1 | Symbols: RHA2B | RING-H2 finger protein 2B |
chr2:100703-101146 FORWARD LENGTH=147
Length = 147
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 191 CAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQ-LHNSCPVCRYEL 235
C VC + + G +V+++ C+HV+H +CL WLQ L+ +CP+CR L
Sbjct: 74 CIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRSPL 119
>AT1G65040.1 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24161992 REVERSE LENGTH=281
Length = 281
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 182 ELLSSELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCR-YELPTDDA 240
E LSS C +C++E T K++ C H++H CL WL+ N+CP CR +P ++A
Sbjct: 104 EELSSNDATCIICREEM---TSAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENA 160
>AT3G18773.1 | Symbols: | RING/U-box superfamily protein |
chr3:6466304-6466966 FORWARD LENGTH=220
Length = 220
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 168 KDAIEKLPTVTVDDEL-LSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLH 225
K A++ LP V E+ L +C +C +F G Q++ +P C H +H C+ WL H
Sbjct: 106 KKALKMLPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQH 165
Query: 226 NSCPVCRYEL 235
+CP CR+ L
Sbjct: 166 MTCPKCRHCL 175
>AT5G42940.1 | Symbols: | RING/U-box superfamily protein |
chr5:17216649-17219171 REVERSE LENGTH=691
Length = 691
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 15/69 (21%)
Query: 179 VDDELLSSELNQ---------------CAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQ 223
V++E +S+ L Q C VCQ+E+ +G + + C H +H +C+ WL+
Sbjct: 610 VNEETISNRLKQRKYKSNTKSPQDAEPCCVCQEEYTEGEDMGTLECGHEFHSQCIKEWLK 669
Query: 224 LHNSCPVCR 232
N CP+C+
Sbjct: 670 QKNLCPICK 678
>AT5G55970.2 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 33/47 (70%)
Query: 190 QCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYELP 236
+C +C +++ +V+++PC H +H +C+ WL++ + CP+C+ +LP
Sbjct: 296 ECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDLP 342
>AT5G55970.1 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 33/47 (70%)
Query: 190 QCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYELP 236
+C +C +++ +V+++PC H +H +C+ WL++ + CP+C+ +LP
Sbjct: 296 ECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDLP 342
>AT1G35625.1 | Symbols: | RING/U-box superfamily protein |
chr1:13158466-13159260 REVERSE LENGTH=201
Length = 201
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 131 LRLPANLGDYFLGPGLEQLIQQLAENDPNRYGTPPASKDAIEKLPTVTVDDELLSSELN- 189
L + A L YF ++ Q + + G KD ++ +PT L +
Sbjct: 56 LVISAVLASYF-SVRRHRIRQHVRDLHHGGQGHSRMPKDLLQSMPTEVYTGVLEEGSTSV 114
Query: 190 QCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWL-QLHNSCPVCR 232
CA+C D++ G ++ +PCKH YH C+ WL + + CPVC+
Sbjct: 115 TCAICIDDYRVGEILRILPCKHKYHAVCIDSWLGRCRSFCPVCK 158
>AT3G61550.1 | Symbols: | RING/U-box superfamily protein |
chr3:22776444-22777082 FORWARD LENGTH=212
Length = 212
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 189 NQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHNSCPVCRYE-LPT 237
C++C E+ + ++ MP CKH +H CL WL+L+ SCPVCR LPT
Sbjct: 134 TTCSICLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPT 184
>AT5G57750.1 | Symbols: | RING/U-box superfamily protein |
chr5:23399668-23400300 FORWARD LENGTH=210
Length = 210
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 160 RYGTPPASKDA------IEKLPTVTVDDEL-LSSELNQCAVCQDEFEKGTQVKQMP-CKH 211
RY T DA I+ LP + + L +L+ CAVC EF +++ +P C H
Sbjct: 84 RYQTRFNLHDAEIDQSFIDALPLLHYKTMIGLRHDLSDCAVCLREFTAEDELRLLPKCSH 143
Query: 212 VYHDECLLPWLQLHNSCPVCR 232
+H EC+ WL +++CP+CR
Sbjct: 144 AFHVECIDTWLLTNSTCPLCR 164
>AT4G15975.1 | Symbols: | RING/U-box superfamily protein |
chr4:9052313-9053020 FORWARD LENGTH=235
Length = 235
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 190 QCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHNSCPVCR 232
+C+VC EF+ + MP CKH +H +C+ W H+SCP+CR
Sbjct: 75 ECSVCLSEFKDNESGRVMPNCKHTFHVDCIDMWFHSHSSCPLCR 118
>AT1G35630.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:13163041-13164484 REVERSE
LENGTH=318
Length = 318
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 168 KDAIEKLPTVTVDDELLSSELN-QCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWL-QLH 225
+D ++ +PT L S + CA+C D++ G +++ +PCKH YH C+ WL +
Sbjct: 209 RDLLQSMPTEVYSGVLEESSTSVTCAICIDDYCVGEKLRILPCKHKYHAVCIDSWLGRCR 268
Query: 226 NSCPVCR 232
+ CPVC+
Sbjct: 269 SFCPVCK 275
>AT2G15530.3 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 65/142 (45%), Gaps = 27/142 (19%)
Query: 98 MFDPILF-----LQNHLQGLRADGANVQFEVDHPGEPGLRLPANLGDYFLGPGLEQLIQQ 152
+FDP+++ + + + +R D N+ +E L L +GD G E +++
Sbjct: 580 VFDPLIYQGMTDMHDRHREMRLDVDNMSYEEL------LALGERIGDVSTGLSEEVILKA 633
Query: 153 LAENDPNRYGTPPASKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMPCKHV 212
+ ++ +S ++E L + C +CQ+E+ +G + + C H
Sbjct: 634 MKQHKHTS-----SSPSSVE-----------LHQNIEPCCICQEEYVEGDNLGTLKCGHE 677
Query: 213 YHDECLLPWLQLHNSCPVCRYE 234
+H +C+ W+ + N CP+C+ E
Sbjct: 678 FHKDCIKQWVMIKNLCPICKTE 699
>AT2G15530.2 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 65/142 (45%), Gaps = 27/142 (19%)
Query: 98 MFDPILF-----LQNHLQGLRADGANVQFEVDHPGEPGLRLPANLGDYFLGPGLEQLIQQ 152
+FDP+++ + + + +R D N+ +E L L +GD G E +++
Sbjct: 580 VFDPLIYQGMTDMHDRHREMRLDVDNMSYEEL------LALGERIGDVSTGLSEEVILKA 633
Query: 153 LAENDPNRYGTPPASKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMPCKHV 212
+ ++ +S ++E L + C +CQ+E+ +G + + C H
Sbjct: 634 MKQHKHTS-----SSPSSVE-----------LHQNIEPCCICQEEYVEGDNLGTLKCGHE 677
Query: 213 YHDECLLPWLQLHNSCPVCRYE 234
+H +C+ W+ + N CP+C+ E
Sbjct: 678 FHKDCIKQWVMIKNLCPICKTE 699
>AT2G15530.1 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 65/142 (45%), Gaps = 27/142 (19%)
Query: 98 MFDPILF-----LQNHLQGLRADGANVQFEVDHPGEPGLRLPANLGDYFLGPGLEQLIQQ 152
+FDP+++ + + + +R D N+ +E L L +GD G E +++
Sbjct: 580 VFDPLIYQGMTDMHDRHREMRLDVDNMSYEEL------LALGERIGDVSTGLSEEVILKA 633
Query: 153 LAENDPNRYGTPPASKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMPCKHV 212
+ ++ +S ++E L + C +CQ+E+ +G + + C H
Sbjct: 634 MKQHKHTS-----SSPSSVE-----------LHQNIEPCCICQEEYVEGDNLGTLKCGHE 677
Query: 213 YHDECLLPWLQLHNSCPVCRYE 234
+H +C+ W+ + N CP+C+ E
Sbjct: 678 FHKDCIKQWVMIKNLCPICKTE 699
>AT4G11370.1 | Symbols: RHA1A | RING-H2 finger A1A |
chr4:6907777-6908256 FORWARD LENGTH=159
Length = 159
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 151 QQLAENDPNRYGTPPASKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMP-C 209
+ + D R+ ++ A E +P V D L + + C VC +FE +V+Q+P C
Sbjct: 47 NETSAPDLTRHALSTSASLANELIPVVRFSD-LPTDPEDCCTVCLSDFESDDKVRQLPKC 105
Query: 210 KHVYHDECLLPWLQLHN--SCPVCRYEL 235
HV+H CL W+ +N CPVCR+
Sbjct: 106 GHVFHHYCLDRWIVDYNKMKCPVCRHRF 133
>AT5G53110.1 | Symbols: | RING/U-box superfamily protein |
chr5:21529022-21533008 FORWARD LENGTH=382
Length = 382
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 170 AIEKLPTVTVDDELLSSELN--QCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHN 226
IE P + + + +++ CA+C E+E ++ +P C+H +H +C+ WL+L+
Sbjct: 307 TIESYPKIVLGESKRLPKVDDATCAICLSEYEPKETLRTIPQCQHCFHADCIDEWLKLNG 366
Query: 227 SCPVCR 232
+CPVCR
Sbjct: 367 TCPVCR 372
>AT1G28040.1 | Symbols: | RING/U-box superfamily protein |
chr1:9773580-9774910 REVERSE LENGTH=299
Length = 299
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 191 CAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHNSCPVCR 232
C +C E+ V+ MP C H +H +C+ WL++H+SCPVCR
Sbjct: 253 CPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHSSCPVCR 295
>AT5G07225.1 | Symbols: | RING/U-box superfamily protein |
chr5:2268642-2270227 REVERSE LENGTH=234
Length = 234
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 167 SKDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHN 226
++ I +LPT+ L E C +C ++ +G ++ +PC H YH +C+ WLQ
Sbjct: 167 TEGQISQLPTIKFKPSL---EDKMCMICHSDYVRGDKLTILPCTHKYHKDCISHWLQNSK 223
Query: 227 SCPVCRYEL 235
C VC+ E+
Sbjct: 224 LCCVCQREV 232
>AT2G37580.1 | Symbols: | RING/U-box superfamily protein |
chr2:15764745-15765452 FORWARD LENGTH=235
Length = 235
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 163 TPPASKDAIEKLPTVTVDDELLSSEL-NQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLP 220
TPP ++ + + S E+ N+C+VC F +++Q+ CKH +H C+
Sbjct: 113 TPPITETTVTSESGGKFHKDTHSKEIGNECSVCLMVFTDSDELRQLSECKHAFHVLCIET 172
Query: 221 WLQLHNSCPVCRYEL 235
WL+ H +CP+CR ++
Sbjct: 173 WLKDHPNCPICRTDV 187
>AT5G17600.1 | Symbols: | RING/U-box superfamily protein |
chr5:5800029-5801117 REVERSE LENGTH=362
Length = 362
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 191 CAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHNSCPVCR 232
C+VC EFE+ ++ +P C H +H C+ WL+ H++CP+CR
Sbjct: 142 CSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCR 184
>AT4G34040.1 | Symbols: | RING/U-box superfamily protein |
chr4:16304638-16307503 REVERSE LENGTH=666
Length = 666
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 187 ELNQCAVCQDEFEKGTQVKQMPCKHVYHDECLLPWLQLHNSCPVCR 232
++ C VCQ+E+ +G + + C H +H C+ WL L N CP+C+
Sbjct: 615 DMEPCCVCQEEYAEGDDLGTLGCGHEFHTACVKQWLMLKNLCPICK 660
>AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B |
chr4:16852233-16852835 REVERSE LENGTH=200
Length = 200
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 174 LPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHNSCPVCR 232
LP +V D S+E CA+C EF +G +++ +P C H +H C+ WL +SCP CR
Sbjct: 99 LPCSSVGDGDSSTE---CAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCR 155
Query: 233 YEL 235
L
Sbjct: 156 RIL 158
>AT1G72220.1 | Symbols: | RING/U-box superfamily protein |
chr1:27184388-27185629 REVERSE LENGTH=413
Length = 413
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 187 ELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHNSCPVCR 232
E C VC +EFE+ ++ +P C H +H C+ WL H +CP+CR
Sbjct: 173 ERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCR 219
>AT2G20030.1 | Symbols: | RING/U-box superfamily protein |
chr2:8647813-8648985 FORWARD LENGTH=390
Length = 390
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 168 KDAIEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHN 226
K AIE LP + +C+VC +FE ++ +P C+H +H C+ WL+ H
Sbjct: 101 KKAIESLPFFRFSALKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHA 160
Query: 227 SCPVCRYELPTDD 239
+CP+CR + +D
Sbjct: 161 TCPLCRNRVNIED 173
>AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein |
chr2:8086860-8088131 REVERSE LENGTH=423
Length = 423
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 191 CAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHNSCPVCRYELPTDDADYENRS 246
C VC EFE +++ +P C H +H EC+ WL H++CP+CR L + + + N S
Sbjct: 126 CPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLSGFSSHHNLS 182
>AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 |
chr3:22254790-22255794 REVERSE LENGTH=334
Length = 334
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 171 IEKLPTVTVDDELLSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHNSCP 229
I K +VT ++S CAVC +FE Q++ +P C H +H +C+ WL + +CP
Sbjct: 99 IFKFSSVTRRSSSMNS--GDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVSNQTCP 156
Query: 230 VCRYELPTDDAD 241
+CR L ++D
Sbjct: 157 LCRSPLFASESD 168
>AT2G27940.1 | Symbols: | RING/U-box superfamily protein |
chr2:11897963-11898742 FORWARD LENGTH=237
Length = 237
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 191 CAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHNSCPVCRYELPTDDAD 241
C +C +FE+G VK +P C HV+H +C+ WL + +CP+CR D D
Sbjct: 140 CVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRSNQLFSDKD 191
>AT1G04360.1 | Symbols: | RING/U-box superfamily protein |
chr1:1167507-1168652 REVERSE LENGTH=381
Length = 381
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 168 KDAIEKLPT-------VTVDDELLSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLL 219
+ AI +P V +E S +C+VC +EF++ +++ +P C HV+H +C+
Sbjct: 104 ESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCID 163
Query: 220 PWLQLHNSCPVCRYEL 235
WLQ + +CP+CR +
Sbjct: 164 IWLQGNANCPLCRTSV 179
>AT4G33565.1 | Symbols: | RING/U-box superfamily protein |
chr4:16136821-16137924 FORWARD LENGTH=367
Length = 367
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 187 ELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHNSCPVCR 232
E C+VC EFE+ ++ +P CKH +H C+ WL+ H +CP+CR
Sbjct: 213 EGTDCSVCLSEFEEEETLRLLPKCKHAFHLYCIDTWLRSHTNCPLCR 259
>AT5G41400.1 | Symbols: | RING/U-box superfamily protein |
chr5:16569584-16570114 REVERSE LENGTH=176
Length = 176
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 164 PPASKDAIEKLPTVTVDDEL---LSSELNQCAVCQDEFEKGTQVKQMP-CKHVYHDECLL 219
P A++ A E LP + + S + CAVC EFE +++++ C+H++H CL
Sbjct: 75 PVAARLAGEILPVIRFSELTRPGFGSGSDCCAVCLHEFENDDEIRRLTNCQHIFHRSCLD 134
Query: 220 PWLQLHN--SCPVCRYELPTDD 239
W+ +N +CP+CR +D+
Sbjct: 135 RWMMGYNQMTCPLCRTPFISDE 156
>AT2G24480.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr2:10397588-10398184 FORWARD
LENGTH=198
Length = 198
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 35/160 (21%)
Query: 91 GTRPESDMFDPILFLQNHLQGLRADGANVQFEVDHPGEPGLRLPANLGDYFLGPGLEQLI 150
G+ P+S DP++ L+ P + RL + L D+ + EQ+
Sbjct: 51 GSYPDSSCHDPLISLK--------------LPCFKPNDVFHRLQSQLHDHVMS---EQIS 93
Query: 151 QQLAENDPNRYGTPPASKDAIEKLPTVTVDDELLS----------------SELNQCAVC 194
++ E R + + + + + +V + ++ S E CA+C
Sbjct: 94 SKIVEAQRQRSQSFYSQQQPLFMIVSVKLTQKVYSVVPCISSPSATDVDQEEESETCAIC 153
Query: 195 QDEFEKGTQVKQMP-CKHVYHDECLLPWLQLH-NSCPVCR 232
+ + QMP CKH YH+ C+ W+ H NSCP+CR
Sbjct: 154 LENMSRSENYCQMPYCKHCYHEGCVTKWVIGHNNSCPLCR 193
>AT3G11110.1 | Symbols: | RING/U-box superfamily protein |
chr3:3479979-3480455 FORWARD LENGTH=158
Length = 158
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 193 VCQDEFEKGTQVKQMP-CKHVYHDECLLPWLQLHNSCPVCRYELPTDDAD 241
+C FE+G ++K +P C H YH EC+ WL+ +SCP+CR + D +
Sbjct: 109 ICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSIRVDSSS 158