Miyakogusa Predicted Gene
- Lj5g3v2258540.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2258540.1 Non Chatacterized Hit- tr|B9R930|B9R930_RICCO
Pentatricopeptide repeat-containing protein, putative ,27.46,5e-17,no
description,Tetratricopeptide-like helical; PPR,Pentatricopeptide
repeat; SUBFAMILY NOT NAMED,NUL,CUFF.57099.1
(307 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 409 e-115
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 409 e-114
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 7e-17
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 8e-17
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 8e-17
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 4e-16
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 1e-15
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 3e-15
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 79 5e-15
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 78 1e-14
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 77 1e-14
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 2e-14
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 3e-14
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 76 3e-14
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 4e-14
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 4e-14
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 5e-14
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 5e-14
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 75 7e-14
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 74 1e-13
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 2e-13
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 3e-13
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 3e-13
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 4e-13
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 4e-13
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 72 5e-13
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 72 6e-13
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 7e-13
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 8e-13
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 8e-13
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 9e-13
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 9e-13
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 1e-12
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 1e-12
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 1e-12
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 1e-12
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 1e-12
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 70 2e-12
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 4e-12
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 5e-12
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 69 6e-12
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 6e-12
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 6e-12
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 68 6e-12
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 8e-12
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 9e-12
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 1e-11
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 67 2e-11
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 67 2e-11
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 67 2e-11
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 67 2e-11
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 2e-11
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 3e-11
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 66 4e-11
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 5e-11
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 65 5e-11
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 6e-11
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 64 2e-10
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 63 3e-10
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 63 3e-10
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 62 4e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 5e-10
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 6e-10
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 62 7e-10
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 8e-10
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 8e-10
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 9e-10
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 60 3e-09
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-09
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 59 6e-09
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 58 1e-08
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 57 2e-08
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 55 4e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 55 8e-08
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 55 8e-08
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 9e-08
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 54 1e-07
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 1e-07
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 54 1e-07
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 54 1e-07
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 1e-07
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 54 1e-07
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 2e-07
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 2e-07
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 2e-07
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 3e-07
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 52 6e-07
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 8e-07
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 8e-07
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 9e-07
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 9e-07
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 9e-07
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 51 1e-06
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 51 1e-06
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 50 2e-06
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 2e-06
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 50 3e-06
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 4e-06
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 5e-06
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 49 5e-06
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 49 6e-06
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 49 6e-06
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 48 6e-06
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 7e-06
AT2G01860.1 | Symbols: EMB975 | Tetratricopeptide repeat (TPR)-l... 48 7e-06
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 409 bits (1052), Expect = e-115, Method: Compositional matrix adjust.
Identities = 197/299 (65%), Positives = 244/299 (81%), Gaps = 2/299 (0%)
Query: 9 HCHFGQLSLPPLHKGKLEYGIVTVKMR-RRRLEVVCKGMLTPRKFMQRRRKNTVFKDAAD 67
H L + + KL+ I+ V ++ + R VVC GML PRKF+Q+RRK VFKDAAD
Sbjct: 14 HLQIRPCVLLCVSQRKLQNNIINVGVKIQNRFRVVCMGMLAPRKFLQKRRKMEVFKDAAD 73
Query: 68 EAEKKNWWKLMEQIDQAGSAVSVLSDEKLK-NQTIPKDLVIGTLVRFKQLKKWNLVIEIL 126
E ++K W LM +I+ GSAV VL K +Q +P+DLV+GTLVRFKQLKKWNLV EIL
Sbjct: 74 ETDQKRWRGLMLEIESTGSAVPVLRQYKTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEIL 133
Query: 127 EWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGK 186
EWLR Q+WW+F ++DF+MLIT YGKLG+FNGAE+VL++++K G PNV+S T+LME+YG+
Sbjct: 134 EWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGR 193
Query: 187 GGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPD 246
GG+ NNAEAIFRRMQ GPEPSA+TYQ+ILKTFV+GDKFKEAEEVFETLLD++KSPLKPD
Sbjct: 194 GGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPD 253
Query: 247 QKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYDQI 305
QKM++MMIYMYKKAG+Y+KARK F+ M +G+ QSTVTYNSLMSFET+YKEVS IYDQ+
Sbjct: 254 QKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQM 312
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 160 KVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTF 219
K+ M ++ P+VVS L++AYG+ R A ++F M G P+ Y ++L F
Sbjct: 307 KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 366
Query: 220 VQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIE 279
++A+ VF+++ D + PD + M+ Y A + A K F + G E
Sbjct: 367 AISGMVEQAKTVFKSMRRDR---IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFE 423
Query: 280 QSTVTYNSLM 289
+ VTY +L+
Sbjct: 424 PNIVTYGTLI 433
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 71/155 (45%), Gaps = 3/155 (1%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
+L+ + G A+ V M ++ P++ S T+++ AY AE F+R++
Sbjct: 361 ILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVD 420
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
G EP+ VTY ++K + + + ++ EV+E + S +K +Q + ++ + ++
Sbjct: 421 GFEPNIVTYGTLIKGYAKANDVEKMMEVYEKM---RLSGIKANQTILTTIMDASGRCKNF 477
Query: 264 DKARKTFALMAERGIEQSTVTYNSLMSFETNYKEV 298
A + M G+ N L+S + E+
Sbjct: 478 GSALGWYKEMESCGVPPDQKAKNVLLSLASTQDEL 512
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 409 bits (1052), Expect = e-114, Method: Compositional matrix adjust.
Identities = 195/284 (68%), Positives = 240/284 (84%), Gaps = 2/284 (0%)
Query: 24 KLEYGIVTVKMR-RRRLEVVCKGMLTPRKFMQRRRKNTVFKDAADEAEKKNWWKLMEQID 82
KL+ I+ V ++ + R VVC GML PRKF+Q+RRK VFKDAADE ++K W LM +I+
Sbjct: 22 KLQNNIINVGVKIQNRFRVVCMGMLAPRKFLQKRRKMEVFKDAADETDQKRWRGLMLEIE 81
Query: 83 QAGSAVSVLSDEKLK-NQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMD 141
GSAV VL K +Q +P+DLV+GTLVRFKQLKKWNLV EILEWLR Q+WW+F ++D
Sbjct: 82 STGSAVPVLRQYKTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEID 141
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F+MLIT YGKLG+FNGAE+VL++++K G PNV+S T+LME+YG+GG+ NNAEAIFRRMQ
Sbjct: 142 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 201
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
GPEPSA+TYQ+ILKTFV+GDKFKEAEEVFETLLD++KSPLKPDQKM++MMIYMYKKAG
Sbjct: 202 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 261
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYDQI 305
+Y+KARK F+ M +G+ QSTVTYNSLMSFET+YKEVS IYDQ+
Sbjct: 262 NYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQM 305
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 160 KVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTF 219
K+ M ++ P+VVS L++AYG+ R A ++F M G P+ Y ++L F
Sbjct: 300 KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 359
Query: 220 VQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIE 279
++A+ VF+++ D + PD + M+ Y A + A K F + G E
Sbjct: 360 AISGMVEQAKTVFKSMRRDR---IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFE 416
Query: 280 QSTVTYNSLM 289
+ VTY +L+
Sbjct: 417 PNIVTYGTLI 426
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 71/155 (45%), Gaps = 3/155 (1%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
+L+ + G A+ V M ++ P++ S T+++ AY AE F+R++
Sbjct: 354 ILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVD 413
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
G EP+ VTY ++K + + + ++ EV+E + S +K +Q + ++ + ++
Sbjct: 414 GFEPNIVTYGTLIKGYAKANDVEKMMEVYEKM---RLSGIKANQTILTTIMDASGRCKNF 470
Query: 264 DKARKTFALMAERGIEQSTVTYNSLMSFETNYKEV 298
A + M G+ N L+S + E+
Sbjct: 471 GSALGWYKEMESCGVPPDQKAKNVLLSLASTQDEL 505
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 80/149 (53%), Gaps = 3/149 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F +LI G+ K F+ A ++ LM + P+VV+ TS +EAY K G + + M+
Sbjct: 276 FNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMR 335
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ G P+ VTY +++ + + + EA V+E + +D PD K ++ +I++ K G
Sbjct: 336 ENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKED---GCVPDAKFYSSLIHILSKTG 392
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMS 290
+ A + F M +G+ + + YN+++S
Sbjct: 393 RFKDAAEIFEDMTNQGVRRDVLVYNTMIS 421
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 12/212 (5%)
Query: 100 TIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAE 159
+ + LV+ L RF WN W +Q+ + + ++ GK +F+
Sbjct: 129 VVTESLVLQVLRRFSN--GWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMW 186
Query: 160 KVLALMNKNGYPPNVV--SQTSLMEAYGKGGRYNNAEAIFRRMQK-FGPEPSAVTYQLIL 216
+++ MNKN V + + +M K G+YN A F M+K +G + + ++
Sbjct: 187 ELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLM 246
Query: 217 KTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAER 276
V+ + + A EVF L D +KPD + FN++I+ + KA +D AR LM
Sbjct: 247 DALVKENSIEHAHEVFLKLFD----TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVT 302
Query: 277 GIEQSTVTYNSLMSF---ETNYKEVSNIYDQI 305
VTY S + E +++ V+ + +++
Sbjct: 303 EFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEM 334
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 7/214 (3%)
Query: 92 SDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGK 151
++E L+N + D V KQ+ + + WL+ Q + + ++ G+
Sbjct: 318 AEEALQNLGLRIDAYQANQV-LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGR 376
Query: 152 LGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVT 211
F K+L M ++G PN V+ L+ +YG+ N A +F +MQ+ G +P VT
Sbjct: 377 AKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVT 436
Query: 212 YQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFA 271
Y ++ + A ++++ + + L PD ++++I KAG A K F
Sbjct: 437 YCTLIDIHAKAGFLDIAMDMYQRM---QAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFC 493
Query: 272 LMAERGIEQSTVTYNSLMSFET---NYKEVSNIY 302
M ++G + VTYN +M NY+ +Y
Sbjct: 494 EMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLY 527
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ ++I GK G A K+ M G PN+V+ +M+ + K Y NA ++R MQ
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 531
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G EP VTY ++++ +EAE VF + ++ PD+ ++ +++ ++ KAG
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM---QQKNWIPDEPVYGLLVDLWGKAG 588
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYD 303
+ +KA + + M G+ + T NSL+S +++ Y+
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYE 630
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 7/214 (3%)
Query: 92 SDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGK 151
++E L+N + D V KQ+ + + WL+ Q + + ++ G+
Sbjct: 318 AEEALQNLGLRIDAYQANQV-LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGR 376
Query: 152 LGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVT 211
F K+L M ++G PN V+ L+ +YG+ N A +F +MQ+ G +P VT
Sbjct: 377 AKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVT 436
Query: 212 YQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFA 271
Y ++ + A ++++ + + L PD ++++I KAG A K F
Sbjct: 437 YCTLIDIHAKAGFLDIAMDMYQRM---QAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFC 493
Query: 272 LMAERGIEQSTVTYNSLMSFET---NYKEVSNIY 302
M ++G + VTYN +M NY+ +Y
Sbjct: 494 EMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLY 527
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ ++I GK G A K+ M G PN+V+ +M+ + K Y NA ++R MQ
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 531
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G EP VTY ++++ +EAE VF + ++ PD+ ++ +++ ++ KAG
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM---QQKNWIPDEPVYGLLVDLWGKAG 588
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYD 303
+ +KA + + M G+ + T NSL+S +++ Y+
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYE 630
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 7/214 (3%)
Query: 92 SDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGK 151
++E L+N + D V KQ+ + + WL+ Q + + ++ G+
Sbjct: 318 AEEALQNLGLRIDAYQANQV-LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGR 376
Query: 152 LGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVT 211
F K+L M ++G PN V+ L+ +YG+ N A +F +MQ+ G +P VT
Sbjct: 377 AKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVT 436
Query: 212 YQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFA 271
Y ++ + A ++++ + + L PD ++++I KAG A K F
Sbjct: 437 YCTLIDIHAKAGFLDIAMDMYQRM---QAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFC 493
Query: 272 LMAERGIEQSTVTYNSLMSFET---NYKEVSNIY 302
M ++G + VTYN +M NY+ +Y
Sbjct: 494 EMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLY 527
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ ++I GK G A K+ M G PN+V+ +M+ + K Y NA ++R MQ
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 531
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G EP VTY ++++ +EAE VF + ++ PD+ ++ +++ ++ KAG
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM---QQKNWIPDEPVYGLLVDLWGKAG 588
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYD 303
+ +KA + + M G+ + T NSL+S +++ Y+
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYE 630
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 72/149 (48%), Gaps = 3/149 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F +L+T K G AE+ + M +G PN VS L+ YG G A ++F M
Sbjct: 551 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 610
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
K G P+ TY +LK +G +EAE+ ++L P D M+N ++ K+G
Sbjct: 611 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL---HAVPAAVDTVMYNTLLTAMCKSG 667
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMS 290
+ KA F M +R I + TY SL+S
Sbjct: 668 NLAKAVSLFGEMVQRSILPDSYTYTSLIS 696
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 89/173 (51%), Gaps = 6/173 (3%)
Query: 138 GKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIF 197
G++ + +I G K G + A +L M+K+G P++V+ ++L+ + K GR+ A+ I
Sbjct: 442 GRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV 501
Query: 198 RRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMY 257
R+ + G P+ + Y ++ + KEA ++E ++ + + D FN+++
Sbjct: 502 CRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHT---RDHFTFNVLVTSL 558
Query: 258 KKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKE---VSNIYDQILK 307
KAG +A + M GI +TV+++ L++ N E +++D++ K
Sbjct: 559 CKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 611
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 75/164 (45%), Gaps = 6/164 (3%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F +LI G F + ++ M K+GY P +V+ +++ Y K GR+ A + M+
Sbjct: 236 FNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMK 295
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G + TY +++ + ++ + + L D K + P++ +N +I + G
Sbjct: 296 SKGVDADVCTYNMLIHDLCRSNRIAKG---YLLLRDMRKRMIHPNEVTYNTLINGFSNEG 352
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMS---FETNYKEVSNIY 302
A + M G+ + VT+N+L+ E N+KE ++
Sbjct: 353 KVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 396
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 72/152 (47%), Gaps = 3/152 (1%)
Query: 139 KMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFR 198
++ + +L+ G K +F+ A M +NG ++ T +++ K G + A +
Sbjct: 408 EVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLN 467
Query: 199 RMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYK 258
M K G +P VTY ++ F + +FK A+E+ + + L P+ +++ +IY
Sbjct: 468 EMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY---RVGLSPNGIIYSTLIYNCC 524
Query: 259 KAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
+ G +A + + M G + T+N L++
Sbjct: 525 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVT 556
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 97/219 (44%), Gaps = 13/219 (5%)
Query: 77 LMEQIDQAGSAVSVLS--DEKLKNQTIPK----DLVIGTLVRFKQLKKWNLVIEILEWLR 130
++ + ++G VSV S E LK + P +++I L +K + +++ +E
Sbjct: 204 ILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKME--- 260
Query: 131 NQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRY 190
+S + + + ++ Y K G F A ++L M G +V + L+ + R
Sbjct: 261 -KSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 319
Query: 191 NNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMF 250
+ R M+K P+ VTY ++ F K A ++ +L L P+ F
Sbjct: 320 AKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS---FGLSPNHVTF 376
Query: 251 NMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
N +I + G++ +A K F +M +G+ S V+Y L+
Sbjct: 377 NALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLL 415
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 165 MNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDK 224
M K P+V + L+ G + + + ++M+K G P+ VTY +L + + +
Sbjct: 224 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 283
Query: 225 FKEAEEVFETLLDDEKSP-LKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTV 283
FK A E LLD KS + D +NM+I+ ++ K M +R I + V
Sbjct: 284 FKAAIE----LLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 339
Query: 284 TYNSLMSFETNYKEV 298
TYN+L++ +N +V
Sbjct: 340 TYNTLINGFSNEGKV 354
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 66/148 (44%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F LI G+ G+F A K+ +M G P+ VS L++ K ++ A + RM+
Sbjct: 376 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 435
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ G +TY ++ + EA + + K + PD ++ +I + K G
Sbjct: 436 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM---SKDGIDPDIVTYSALINGFCKVG 492
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
+ A++ + G+ + + Y++L+
Sbjct: 493 RFKTAKEIVCRIYRVGLSPNGIIYSTLI 520
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 91/214 (42%), Gaps = 17/214 (7%)
Query: 90 VLSDEKLKNQTIPKDLVIGT--LVRFKQLKKWNLVIEILEWLRNQSWWDFGKM------- 140
V+ L+ I + + I T LVR + +++ L + +S + FG +
Sbjct: 100 VVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLC 159
Query: 141 -----DFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEA 195
+ +LI Y + G + ++ LM G+ P+V + +++ + K G + +
Sbjct: 160 NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 219
Query: 196 IFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIY 255
+ M K P T+ +++ F+++ + + + EKS P +N +++
Sbjct: 220 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM---EKSGYAPTIVTYNTVLH 276
Query: 256 MYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
Y K G + A + M +G++ TYN L+
Sbjct: 277 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLI 310
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 96/194 (49%), Gaps = 3/194 (1%)
Query: 111 VRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGY 170
+ K+ W +EI EW +++ ++ + + +++ GK + + + M + G
Sbjct: 159 IILKEQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGI 218
Query: 171 PPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEE 230
P + +L++ Y KGG +A +M K G +P VT ++L+ + + +F++AEE
Sbjct: 219 KPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEE 278
Query: 231 VFETLLDDEK---SPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNS 287
F+ DE S + +N MI Y K+G +A +TF M E GI +TVT+N+
Sbjct: 279 FFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNT 338
Query: 288 LMSFETNYKEVSNI 301
++ N ++ +
Sbjct: 339 MIHIYGNNGQLGEV 352
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 16/216 (7%)
Query: 98 NQTIPKDLVIGTLVRFKQLKKWNLVI-EILEWLRNQSWWDFGKMDFIMLITGYGKLGDFN 156
+ IP VI + V+ QL V E++E+ +G +LI + G+
Sbjct: 573 SDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYG-----VLINAFADTGNVQ 627
Query: 157 GAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPE---PSAVTYQ 213
A + M + G P N V SL++ Y K G + AEAI+R++ + + P T
Sbjct: 628 QAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSN 687
Query: 214 LILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALM 273
++ + + ++AE +F+++ K + ++ F MM+ MYKK G +++A + M
Sbjct: 688 CMINLYSERSMVRKAEAIFDSM----KQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQM 743
Query: 274 AERGIEQSTVTYNS---LMSFETNYKEVSNIYDQIL 306
E I ++YNS L + + +KE + +++
Sbjct: 744 REMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMV 779
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 95/218 (43%), Gaps = 30/218 (13%)
Query: 88 VSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFI---- 143
V L DE ++ P + GTL+ K L + L WL GKM I
Sbjct: 206 VQSLWDEMIRKGIKPINSTYGTLIDV--YSKGGLKVHALCWL--------GKMSKIGMQP 255
Query: 144 ------MLITGYGKLGDFNGAEKVLA--LMNKNGYPPNVV----SQTSLMEAYGKGGRYN 191
+++ Y K +F AE+ ++N +V + ++++ YGK G+
Sbjct: 256 DEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIK 315
Query: 192 NAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFN 251
A F+RM + G P+ VT+ ++ + + E + +T+ K PD + +N
Sbjct: 316 EASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM----KLHCAPDTRTYN 371
Query: 252 MMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
++I ++ K ++A F M + G++ V+Y +L+
Sbjct: 372 ILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLL 409
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 78/171 (45%), Gaps = 6/171 (3%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+++ ++I YG A ++ M G P+ + +L++ + +
Sbjct: 506 IEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEK 565
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M++ G + Y ++ +FV+ + AEEV++ +++ ++PD ++ ++I +
Sbjct: 566 MRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVE---YNIEPDVVVYGVLINAFAD 622
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNY---KEVSNIYDQILK 307
G+ +A M E GI ++V YNSL+ T E IY ++L+
Sbjct: 623 TGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQ 673
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 4/144 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
+I YGK G A + M + G P V+ +++ YG G+ ++ + M K
Sbjct: 304 MIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KLH 362
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P TY +++ + + + A F+ + DD LKPD + ++Y + +
Sbjct: 363 CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDD---GLKPDPVSYRTLLYAFSIRHMVE 419
Query: 265 KARKTFALMAERGIEQSTVTYNSL 288
+A A M + +E T ++L
Sbjct: 420 EAEGLIAEMDDDNVEIDEYTQSAL 443
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 157 GAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLIL 216
G+E+ L K+GY P++V S++ + + Y+ AE I +++ G P VTY ++
Sbjct: 614 GSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLM 673
Query: 217 KTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAER 276
+V+ + +AEE+ +TL EKS LKPD +N +I + + G +A + + M ER
Sbjct: 674 DMYVRRGECWKAEEILKTL---EKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTER 730
Query: 277 GIEQSTVTYNSLMSFETNYKEVSNIYDQI 305
GI TYN+ +S T + I D I
Sbjct: 731 GIRPCIFTYNTFVSGYTAMGMFAEIEDVI 759
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 87/175 (49%), Gaps = 4/175 (2%)
Query: 117 KKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVS 176
+ W ++ +L+ +R++ F + +++ + G A++ A + GY P V+
Sbjct: 260 RSWRKILGVLDEMRSKGL-KFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVT 318
Query: 177 QTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLL 236
+L++ +GK G Y A ++ + M++ +VTY ++ +V+ KEA V E +
Sbjct: 319 YNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMM- 377
Query: 237 DDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSF 291
K + P+ + +I Y KAG D+A K F M E G +T TYN+++S
Sbjct: 378 --TKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSL 430
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 8/200 (4%)
Query: 94 EKLKNQTIPKDLVIGTLVR-FKQLKKWNLVIEILEWLRNQSWWDFGKMDFIML---ITGY 149
+ +K++ + DLV +LV+ W + + EWL S K+D ++ +
Sbjct: 128 DSVKSELLRTDLV--SLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRIL 185
Query: 150 GKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSA 209
G+ ++ A K+L + Y +V + T+++ AY + G+Y A +F RM++ GP P+
Sbjct: 186 GRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTL 245
Query: 210 VTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKT 269
VTY +IL F G + ++ L + LK D+ + ++ + G +A++
Sbjct: 246 VTYNVILDVF--GKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEF 303
Query: 270 FALMAERGIEQSTVTYNSLM 289
FA + G E TVTYN+L+
Sbjct: 304 FAELKSCGYEPGTVTYNALL 323
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 74/178 (41%), Gaps = 32/178 (17%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ Y + G A V+ +M K G PN ++ T++++AYGK G+ + A +F M++ G
Sbjct: 357 LVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAG 416
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSP---------------------- 242
P+ TY +L + + E ++ + + SP
Sbjct: 417 CVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVN 476
Query: 243 ----------LKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
+PD+ FN +I Y + GS A K + M G TYN+L++
Sbjct: 477 RVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLN 534
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ + GD+ E V++ M G+ P S + +++ Y KGG Y E I R+++
Sbjct: 532 LLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQ 591
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
PS + + +L + +E F TL +K KPD +FN M+ ++ + YD
Sbjct: 592 IFPSWMLLRTLLLANFKCRALAGSERAF-TLF--KKHGYKPDMVIFNSMLSIFTRNNMYD 648
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
+A + E G+ VTYNSLM
Sbjct: 649 QAEGILESIREDGLSPDLVTYNSLM 673
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 76/160 (47%), Gaps = 3/160 (1%)
Query: 135 WDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAE 194
++ G + + L+ +GK G + A VL M +N P + V+ L+ AY + G A
Sbjct: 312 YEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAA 371
Query: 195 AIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMI 254
+ M K G P+A+TY ++ + + K EA ++F ++ +++ P+ +N ++
Sbjct: 372 GVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM---KEAGCVPNTCTYNAVL 428
Query: 255 YMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETN 294
+ K ++ K M G + T+N++++ N
Sbjct: 429 SLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGN 468
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ Y + G+ AE++L + K+ P++VS ++++ + + G A + M + G
Sbjct: 672 LMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG 731
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P TY + + F E E+V E + K+ +P++ F M++ Y +AG Y
Sbjct: 732 IRPCIFTYNTFVSGYTAMGMFAEIEDVIECM---AKNDCRPNELTFKMVVDGYCRAGKYS 788
Query: 265 KA 266
+A
Sbjct: 789 EA 790
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 81/154 (52%), Gaps = 3/154 (1%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G K G+ N A ++L M K G +VV+ +L+ GR+++A + R M K
Sbjct: 182 LIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS 241
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P VT+ ++ FV+ EA+E+++ ++ +S + P+ +N +I G
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMI---QSSVDPNNVTYNSIINGLCMHGRLY 298
Query: 265 KARKTFALMAERGIEQSTVTYNSLMSFETNYKEV 298
A+KTF LMA +G + VTYN+L+S ++ V
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMV 332
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 75/149 (50%), Gaps = 3/149 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F L+ G+ + A ++ LM K+GY PNVV +L++ K G N A + M+
Sbjct: 144 FGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEME 203
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
K G VTY +L ++ +A + ++ K + PD F +I ++ K G
Sbjct: 204 KKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM---KRSINPDVVTFTALIDVFVKQG 260
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMS 290
+ D+A++ + M + ++ + VTYNS+++
Sbjct: 261 NLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 100/215 (46%), Gaps = 7/215 (3%)
Query: 75 WKLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSW 134
+ L+ +I A S V ++ + + + +I L + +L N+ +E+L + +
Sbjct: 151 FCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGEL---NIALELLNEMEKKGL 207
Query: 135 WDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAE 194
+ + L+TG G ++ A ++L M K P+VV+ T+L++ + K G + A+
Sbjct: 208 GA-DVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQ 266
Query: 195 AIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMI 254
+++ M + +P+ VTY I+ + +A++ F+ + P+ +N +I
Sbjct: 267 ELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLM---ASKGCFPNVVTYNTLI 323
Query: 255 YMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+ K D+ K F M+ G TYN+L+
Sbjct: 324 SGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+DF L+T L + M G ++ S T L+ + + R + A ++ +
Sbjct: 72 VDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGK 131
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M K G EPS VT+ +L F ++ +A F ++ KS +P+ ++N +I K
Sbjct: 132 MMKLGYEPSIVTFGSLLHGFCLVNRIGDA---FSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
G + A + M ++G+ VTYN+L++
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLT 219
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F LI G+ ++ D +G ++VL LM + +V++ +++M A+ G A +F+ M
Sbjct: 298 FNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMV 357
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
K G +P A Y ++ K +V+ + K+AEE+ ETL+ + +P+ +F +I + G
Sbjct: 358 KAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES----RPNVVIFTTVISGWCSNG 413
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
S D A + F M + G+ + T+ +LM
Sbjct: 414 SMDDAMRVFNKMCKFGVSPNIKTFETLM 441
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNG---YPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
LI GYG G + ++L LM + G PN+ + L++A+ K + A + ++M+
Sbjct: 156 LIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKME 215
Query: 202 KFGPEPSAVTYQLILKTFVQ-GDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKA 260
+ G P VTY I +VQ G+ + EV E ++ EK+ KP+ + +++ Y +
Sbjct: 216 ECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKA--KPNGRTCGIVVGGYCRE 273
Query: 261 GSYDKARKTFALMAERGIEQSTVTYNSLMS 290
G + M E +E + V +NSL++
Sbjct: 274 GRVRDGLRFVRRMKEMRVEANLVVFNSLIN 303
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Query: 173 NVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVF 232
V S+T LM + GR + A+ +F+ + + G PS ++Y +L ++ +
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIV 103
Query: 233 ETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+ E+S K D FN +I + ++G+ + A + M E G+ +T TYN+L+
Sbjct: 104 SEV---EQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLI 157
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/151 (17%), Positives = 73/151 (48%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+ + L+ + +++ + ++G + + +++ A+ + G +A +
Sbjct: 81 ISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLK 140
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M++ G P+ TY ++K + K + + E+ + +L++ + P+ + FN+++ + K
Sbjct: 141 MKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCK 200
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
++A + M E G+ TVTYN++ +
Sbjct: 201 KKKVEEAWEVVKKMEECGVRPDTVTYNTIAT 231
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 70/138 (50%), Gaps = 4/138 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ +L GY + + AE++L + P NVV T+++ + G ++A +F +M
Sbjct: 368 YSILAKGYVRAKEPKKAEELLETLIVESRP-NVVIFTTVISGWCSNGSMDDAMRVFNKMC 426
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
KFG P+ T++ ++ +++ + +AEEV + + +KP+ F ++ ++ AG
Sbjct: 427 KFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMM---RGCGVKPENSTFLLLAEAWRVAG 483
Query: 262 SYDKARKTFALMAERGIE 279
D++ K + + IE
Sbjct: 484 LTDESNKAINALKCKDIE 501
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 108/223 (48%), Gaps = 17/223 (7%)
Query: 77 LMEQIDQAGSAVSVLSD--EKLKNQTIPKDLVIGTLVRFKQL---KKWNLVIEILEWLRN 131
L+E +G SVLS+ E K++ P+ L K L KK++L + +W
Sbjct: 106 LIEPNFDSGQLDSVLSELFEPFKDK--PESTSSELLAFLKGLGFHKKFDLALRAFDWFMK 163
Query: 132 QSWWDFGKM----DFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKG 187
Q D+ M ++I+ GK G + A + + ++G+ +V S TSL+ A+
Sbjct: 164 QK--DYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANS 221
Query: 188 GRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQ-GDKFKEAEEVFETLLDDEKSPLKPD 246
GRY A +F++M++ G +P+ +TY +IL F + G + + + E + D + PD
Sbjct: 222 GRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDG---IAPD 278
Query: 247 QKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+N +I K+ + +A + F M G VTYN+L+
Sbjct: 279 AYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALL 321
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 13/219 (5%)
Query: 94 EKLKNQTI-PKDLVIGTLVRFKQLKKWNL---VIEILEWLRNQSWWDFGKMDFIMLITGY 149
EK+K+ I P TL+ K+ +L ++ E ++ + + + K+ + L+ Y
Sbjct: 268 EKMKSDGIAPDAYTYNTLITC--CKRGSLHQEAAQVFEEMK-AAGFSYDKVTYNALLDVY 324
Query: 150 GKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSA 209
GK A KVL M NG+ P++V+ SL+ AY + G + A + +M + G +P
Sbjct: 325 GKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 384
Query: 210 VTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKT 269
TY +L F + K + A +FE + + KP+ FN I MY G + + K
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEM---RNAGCKPNICTFNAFIKMYGNRGKFTEMMKI 441
Query: 270 FALMAERGIEQSTVTYNSLMS-FETNY--KEVSNIYDQI 305
F + G+ VT+N+L++ F N EVS ++ ++
Sbjct: 442 FDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 480
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 10/210 (4%)
Query: 95 KLKNQ-----TIPKDLVIGTLVR-FKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITG 148
+LKNQ T P TL+ F++ K + I E +RN F I
Sbjct: 370 ELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP-NICTFNAFIKM 428
Query: 149 YGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPS 208
YG G F K+ +N G P++V+ +L+ +G+ G + +F+ M++ G P
Sbjct: 429 YGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPE 488
Query: 209 AVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARK 268
T+ ++ + + F++A V+ +LD + + PD +N ++ + G ++++ K
Sbjct: 489 RETFNTLISAYSRCGSFEQAMTVYRRMLD---AGVTPDLSTYNTVLAALARGGMWEQSEK 545
Query: 269 TFALMAERGIEQSTVTYNSLMSFETNYKEV 298
A M + + + +TY SL+ N KE+
Sbjct: 546 VLAEMEDGRCKPNELTYCSLLHAYANGKEI 575
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Query: 158 AEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILK 217
AE+ + + + G+ P++ + S++ YG+ A + M++ G PS TY ++
Sbjct: 613 AERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMY 672
Query: 218 TFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERG 277
+ F ++EE+ +L +KPD +N +IY Y + A + F+ M G
Sbjct: 673 MHSRSADFGKSEEILREIL---AKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSG 729
Query: 278 IEQSTVTYNSLM 289
I +TYN+ +
Sbjct: 730 IVPDVITYNTFI 741
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 62/145 (42%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
++ + G + +EKVLA M PN ++ SL+ AY G ++ +
Sbjct: 530 VLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV 589
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
EP AV + ++ + D EAE F L ++ PD N M+ +Y +
Sbjct: 590 IEPRAVLLKTLVLVCSKCDLLPEAERAFSEL---KERGFSPDITTLNSMVSIYGRRQMVA 646
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
KA M ERG S TYNSLM
Sbjct: 647 KANGVLDYMKERGFTPSMATYNSLM 671
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 67/145 (46%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
+++ YG+ A VL M + G+ P++ + SLM + + + +E I R + G
Sbjct: 635 MVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKG 694
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+P ++Y ++ + + + ++A +F + S + PD +N I Y ++
Sbjct: 695 IKPDIISYNTVIYAYCRNTRMRDASRIFSEM---RNSGIVPDVITYNTFIGSYAADSMFE 751
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
+A M + G + TYNS++
Sbjct: 752 EAIGVVRYMIKHGCRPNQNTYNSIV 776
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 78/183 (42%), Gaps = 25/183 (13%)
Query: 113 FKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPP 172
FK++K+ V E + F LI+ Y + G F A V M G P
Sbjct: 477 FKEMKRAGFVPE--------------RETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTP 522
Query: 173 NVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKF----KEA 228
++ + +++ A +GG + +E + M+ +P+ +TY +L + G + A
Sbjct: 523 DLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLA 582
Query: 229 EEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSL 288
EEV+ +++ P + ++ + K +A + F+ + ERG T NS+
Sbjct: 583 EEVYSGVIE-------PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSM 635
Query: 289 MSF 291
+S
Sbjct: 636 VSI 638
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ + + DF +E++L + G P+++S +++ AY + R +A IF M+ G
Sbjct: 670 LMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSG 729
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P +TY + ++ F+EA V ++ K +P+Q +N ++ Y K D
Sbjct: 730 IVPDVITYNTFIGSYAADSMFEEAIGVVRYMI---KHGCRPNQNTYNSIVDGYCKLNRKD 786
Query: 265 KAR 267
+A+
Sbjct: 787 EAK 789
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 4/148 (2%)
Query: 144 MLITGYGKLGD-FNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQK 202
+++ +GK+G +N ++ M +G P+ + +L+ +G + A +F M+
Sbjct: 248 VILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKA 307
Query: 203 FGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGS 262
G VTY +L + + + KEA +V ++ + S P +N +I Y + G
Sbjct: 308 AGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFS---PSIVTYNSLISAYARDGM 364
Query: 263 YDKARKTFALMAERGIEQSTVTYNSLMS 290
D+A + MAE+G + TY +L+S
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLS 392
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G+ G ++ K+L M K PNVV+ + L++++ K G+ A+ + + M + G
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ +TY ++ F + ++ +EA ++ + ++ PD FN++I Y KA D
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMI---SKGCDPDIMTFNILINGYCKANRID 420
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
+ F M+ RG+ +TVTYN+L+
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLV 445
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 73/151 (48%), Gaps = 3/151 (1%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
M F +LI GY K + ++ M+ G N V+ +L++ + + G+ A+ +F+
Sbjct: 404 MTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQE 463
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M P V+Y+++L + ++A E+F + EKS ++ D ++ ++I+
Sbjct: 464 MVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI---EKSKMELDIGIYMIIIHGMCN 520
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
A D A F + +G++ YN ++S
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKLDARAYNIMIS 551
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 75/159 (47%), Gaps = 3/159 (1%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G+ K A +++ LM G P++++ L+ Y K R ++ +FR M G
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRG 433
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+ VTY +++ F Q K + A+++F+ ++ ++PD + +++ G +
Sbjct: 434 VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMV---SRRVRPDIVSYKILLDGLCDNGELE 490
Query: 265 KARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYD 303
KA + F + + +E Y ++ N +V + +D
Sbjct: 491 KALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWD 529
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 74/177 (41%), Gaps = 11/177 (6%)
Query: 118 KWNLVIEILEWLRNQSWWDF--GKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVV 175
K N + + LE R S + + L+ G+ + G A+K+ M P++V
Sbjct: 415 KANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIV 474
Query: 176 SQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETL 235
S L++ G A IF +++K E Y +I+ K +A ++F +L
Sbjct: 475 SYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSL 534
Query: 236 LDDEKSPLKP---DQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
PLK D + +N+MI + S KA F M E G +TYN L+
Sbjct: 535 ------PLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILI 585
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 81/146 (55%), Gaps = 4/146 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
+I+ G+ G A+++ GY V + ++L+ AYG+ G + A ++F M+++G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 205 PEPSAVTYQLILKTFVQGD-KFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
P+ VTY ++ +G +FK+ + F+ + +++ ++PD+ FN ++ + + G +
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM---QRNGVQPDRITFNSLLAVCSRGGLW 355
Query: 264 DKARKTFALMAERGIEQSTVTYNSLM 289
+ AR F M R IEQ +YN+L+
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLL 381
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 77/151 (50%), Gaps = 3/151 (1%)
Query: 139 KMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFR 198
++ + L++ Y K+G A +L M G +VV+ +L+ YGK G+Y+ + +F
Sbjct: 444 RVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFT 503
Query: 199 RMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYK 258
M++ P+ +TY ++ + +G +KEA E+F + + L+ D +++ +I
Sbjct: 504 EMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF---KSAGLRADVVLYSALIDALC 560
Query: 259 KAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
K G A M + GI + VTYNS++
Sbjct: 561 KNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 6/161 (3%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ K G + A ++LA M PNVVS +++++ + K GR++ A +F M+ G
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG 439
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
V+Y +L + K +EE + L + +K D +N ++ Y K G YD
Sbjct: 440 IALDRVSYNTLLSIYT---KVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYD 496
Query: 265 KARKTFALMAERGIEQSTVTYNSLMSFETN---YKEVSNIY 302
+ +K F M + + +TY++L+ + YKE I+
Sbjct: 497 EVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 3/150 (2%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+ + +I G+ K G F+ A + M G + VS +L+ Y K GR A I R
Sbjct: 410 VSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILRE 469
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M G + VTY +L + + K+ E ++VF + ++ + P+ ++ +I Y K
Sbjct: 470 MASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM---KREHVLPNLLTYSTLIDGYSK 526
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLM 289
G Y +A + F G+ V Y++L+
Sbjct: 527 GGLYKEAMEIFREFKSAGLRADVVLYSALI 556
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Query: 145 LITGYGKLG-DFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
+I GK G +F K M +NG P+ ++ SL+ +GG + A +F M
Sbjct: 309 VIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNR 368
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
E +Y +L +G + A FE L + P+ ++ +I + KAG +
Sbjct: 369 RIEQDVFSYNTLLDAICKGGQMDLA---FEILAQMPVKRIMPNVVSYSTVIDGFAKAGRF 425
Query: 264 DKARKTFALMAERGIEQSTVTYNSLMSFET 293
D+A F M GI V+YN+L+S T
Sbjct: 426 DEALNLFGEMRYLGIALDRVSYNTLLSIYT 455
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 68/145 (46%), Gaps = 5/145 (3%)
Query: 124 EILEWLRNQSWWDFGK--MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLM 181
E L+ LR + K + + L+ GYGK G ++ +KV M + PN+++ ++L+
Sbjct: 462 EALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLI 521
Query: 182 EAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKS 241
+ Y KGG Y A IFR + G V Y ++ + A + + + K
Sbjct: 522 DGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEM---TKE 578
Query: 242 PLKPDQKMFNMMIYMYKKAGSYDKA 266
+ P+ +N +I + ++ + D++
Sbjct: 579 GISPNVVTYNSIIDAFGRSATMDRS 603
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 13/196 (6%)
Query: 113 FKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPP 172
FKQ+ K+ E RN D ++ F L+ + G + A + M
Sbjct: 320 FKQVAKF-----FDEMQRNGVQPD--RITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQ 372
Query: 173 NVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVF 232
+V S +L++A KGG+ + A I +M P+ V+Y ++ F + +F EA +F
Sbjct: 373 DVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLF 432
Query: 233 ETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSF- 291
+ + D+ +N ++ +Y K G ++A MA GI++ VTYN+L+
Sbjct: 433 GEM---RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGY 489
Query: 292 --ETNYKEVSNIYDQI 305
+ Y EV ++ ++
Sbjct: 490 GKQGKYDEVKKVFTEM 505
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 85/178 (47%), Gaps = 6/178 (3%)
Query: 113 FKQLKKWNLVIEIL-EWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYP 171
F +L++ V ++L E S D + +L+ Y K G A V M G
Sbjct: 292 FGKLRRLEKVCDLLGEMASGGSLPDI--TSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCT 349
Query: 172 PNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEV 231
PN + + L+ +G+ GRY++ +F M+ +P A TY ++++ F +G FKE +
Sbjct: 350 PNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTL 409
Query: 232 FETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
F ++++ ++PD + + +I+ K G ++ ARK M I S+ Y ++
Sbjct: 410 FHDMVEEN---IEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVI 464
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ +GKL +L M G P++ S L+EAY K G A +F +MQ G
Sbjct: 288 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG 347
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+A TY ++L F Q ++ + ++F L+ + S PD +N++I ++ + G +
Sbjct: 348 CTPNANTYSVLLNLFGQSGRYDDVRQLF---LEMKSSNTDPDAATYNILIEVFGEGGYFK 404
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
+ F M E IE TY ++
Sbjct: 405 EVVTLFHDMVEENIEPDMETYEGII 429
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 3/146 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
+I GK G A K+L M N P+ + T ++EA+G+ Y A F M + G
Sbjct: 428 IIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVG 487
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
PS T+ +L +F +G KE+E + L+D S + ++ FN I YK+ G ++
Sbjct: 488 SNPSIETFHSLLYSFARGGLVKESEAILSRLVD---SGIPRNRDTFNAQIEAYKQGGKFE 544
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
+A KT+ M + + T +++S
Sbjct: 545 EAVKTYVDMEKSRCDPDERTLEAVLS 570
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 78/177 (44%), Gaps = 2/177 (1%)
Query: 113 FKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPP 172
F W + + ++++ Q W + + ++I+ G+ G + +V M G
Sbjct: 115 FAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSR 174
Query: 173 NVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVF 232
+V S T+L+ AYG+ GRY + + RM+ PS +TY ++ +G + E +
Sbjct: 175 SVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGG--LDWEGLL 232
Query: 233 ETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+ ++PD +N ++ G D+A F M + GI TY+ L+
Sbjct: 233 GLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLV 289
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
Query: 154 DFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQ 213
D+ G + A M G P++V+ +L+ A G + AE +FR M G P TY
Sbjct: 227 DWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYS 286
Query: 214 LILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALM 273
+++TF K + E+V + L + PD +N+++ Y K+GS +A F M
Sbjct: 287 HLVETF---GKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 343
Query: 274 AERGIEQSTVTYNSLMSF 291
G + TY+ L++
Sbjct: 344 QAAGCTPNANTYSVLLNL 361
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 72/148 (48%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ +L+ +G+ G ++ ++ M + P+ + L+E +G+GG + +F M
Sbjct: 355 YSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMV 414
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ EP TY+ I+ +G ++A ++ + + ++ + P K + +I + +A
Sbjct: 415 EENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAND---IVPSSKAYTGVIEAFGQAA 471
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
Y++A F M E G S T++SL+
Sbjct: 472 LYEEALVAFNTMHEVGSNPSIETFHSLL 499
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 88/193 (45%), Gaps = 6/193 (3%)
Query: 113 FKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPP 172
KQ+ + + WL+ Q + + ++ G+ F K+L M ++G P
Sbjct: 333 LKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKP 392
Query: 173 NVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVF 232
N V+ L+ +YG+ A +F +MQ+ G EP VTY ++ + A +++
Sbjct: 393 NTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMY 452
Query: 233 ETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFE 292
+ + +++ L PD ++++I KAG A + F M +G + VT+N +++
Sbjct: 453 QRM---QEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALH 509
Query: 293 T---NYKEVSNIY 302
NY+ +Y
Sbjct: 510 AKARNYETALKLY 522
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 3/162 (1%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ ++I GK G A ++ M G PN+V+ ++ + K Y A ++R MQ
Sbjct: 467 YSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQ 526
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G +P VTY ++++ +EAE VF + ++ PD+ ++ +++ ++ KAG
Sbjct: 527 NAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEM---QRKNWVPDEPVYGLLVDLWGKAG 583
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYD 303
+ DKA + + M + G+ + T NSL+S +S Y+
Sbjct: 584 NVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYN 625
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 110/247 (44%), Gaps = 21/247 (8%)
Query: 62 FKDAADEAEKKNWWKLMEQIDQAGSAVS--VLSDEKLKNQTIPKDLVIGTLVR----FKQ 115
F D D K +W ME+ V+ +L D K + ++R
Sbjct: 338 FSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPN 397
Query: 116 LKKWN-LVIEILEWLR-NQSWWDFGKMD----------FIMLITGYGKLGDFNGAEKVLA 163
L +N L+ +L R + + FG M+ +I+ I YGK GD A +
Sbjct: 398 LHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFE 457
Query: 164 LMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGD 223
M G PN+V+ + + + K GR A+ IF ++ G P +VTY +++K +
Sbjct: 458 KMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCY---S 514
Query: 224 KFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTV 283
K E +E + L + ++ +PD + N +I KA D+A K F M E ++ + V
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574
Query: 284 TYNSLMS 290
TYN+L++
Sbjct: 575 TYNTLLA 581
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 32/178 (17%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ G GK D + +L M G PNV + T + G+ G+ N A I +RM G
Sbjct: 229 LMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG 288
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFE---------------TLLDD----------- 238
P VTY +++ K A+EVFE TLLD
Sbjct: 289 CGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVK 348
Query: 239 ------EKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
EK PD F +++ KAG++ +A T +M ++GI + TYN+L+
Sbjct: 349 QFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLIC 406
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 99/230 (43%), Gaps = 10/230 (4%)
Query: 80 QIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGK 139
+ID+ +S + + TI ++VI LV+ + +++ L + +
Sbjct: 835 KIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDD---ALDLYYDLMSDRDFSPTA 891
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+ LI G K G A+++ M G PN L+ +GK G + A A+F+R
Sbjct: 892 CTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKR 951
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M K G P TY +++ + E F+ L ++S L PD +N++I K
Sbjct: 952 MVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL---KESGLNPDVVCYNLIINGLGK 1008
Query: 260 AGSYDKARKTFALM-AERGIEQSTVTYNSL---MSFETNYKEVSNIYDQI 305
+ ++A F M RGI TYNSL + +E IY++I
Sbjct: 1009 SHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEI 1058
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 7/210 (3%)
Query: 83 QAGSAVSVLSD-EKLKNQTIPKDLVI--GTLVRFKQLKKWNLVIEILEWLRNQSWWDFGK 139
++G +VS L EK+K + I ++V +L + + +I L++
Sbjct: 445 KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVP-DS 503
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+ + M++ Y K+G+ + A K+L+ M +NG P+V+ SL+ K R + A +F R
Sbjct: 504 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMR 563
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M++ +P+ VTY +L + K +EA E+FE ++ + P+ FN + K
Sbjct: 564 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMV---QKGCPPNTITFNTLFDCLCK 620
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLM 289
A K M + G TYN+++
Sbjct: 621 NDEVTLALKMLFKMMDMGCVPDVFTYNTII 650
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 2/146 (1%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
+LI G+GK G+ + A + M K G P++ + + L++ GR + F+ +++
Sbjct: 931 ILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES 990
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
G P V Y LI+ + + +EA +F + + PD +N +I AG
Sbjct: 991 GLNPDVVCYNLIINGLGKSHRLEEALVLFNEM--KTSRGITPDLYTYNSLILNLGIAGMV 1048
Query: 264 DKARKTFALMAERGIEQSTVTYNSLM 289
++A K + + G+E + T+N+L+
Sbjct: 1049 EEAGKIYNEIQRAGLEPNVFTFNALI 1074
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 96/208 (46%), Gaps = 7/208 (3%)
Query: 80 QIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGK 139
+I++A + + DE + ++I L ++L V E ++ R++ +
Sbjct: 273 KINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKP----DR 328
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+ +I L+ + D + ++ + M K+G+ P+VV+ T L++A K G + A
Sbjct: 329 VTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDV 388
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M+ G P+ TY ++ ++ + +A E+F + E +KP + + I Y K
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM---ESLGVKPTAYTYIVFIDYYGK 445
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNS 287
+G A +TF M +GI + V N+
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNA 473
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Query: 158 AEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILK 217
A+ V + G P+V + L++AYGK G+ + +++ M E + +T+ +++
Sbjct: 804 AQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVIS 863
Query: 218 TFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERG 277
V+ +A +++ L+ D P + +I K+G +A++ F M + G
Sbjct: 864 GLVKAGNVDDALDLYYDLMSDRD--FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYG 921
Query: 278 IEQSTVTYNSLMS 290
+ YN L++
Sbjct: 922 CRPNCAIYNILIN 934
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 9/157 (5%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F LI GY K + A K+L ++ G P+VVS T+LM+AY G + + + R M+
Sbjct: 506 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 565
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEA-----EEVFET----LLDDEKSPLKPDQKMFNM 252
G P+ VTY +I K +G K + E +FE L D E + PDQ +N
Sbjct: 566 AEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNT 625
Query: 253 MIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+I + A +M R ++ S+ TYN L+
Sbjct: 626 IIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILI 662
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 5/164 (3%)
Query: 128 WLRNQSWWDFGK--MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYG 185
+LR W D G + F +++GY KLG + A+ + K G P+V S L+
Sbjct: 209 FLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLC 268
Query: 186 KGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKP 245
G A + M K G EP +VTY ++ K F A EV +LD L P
Sbjct: 269 LVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLD---KGLSP 325
Query: 246 DQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
D + +++ + G+ D M RG E +++ S+M
Sbjct: 326 DVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 75/146 (51%), Gaps = 3/146 (2%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
++++G K G + A + M +G P++V+ + ++ K G+++ A ++ M
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
P++ T+ +L Q EA + ++L+ ++ D ++N++I Y K+G
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL---DIVLYNIVIDGYAKSGCI 484
Query: 264 DKARKTFALMAERGIEQSTVTYNSLM 289
++A + F ++ E GI S T+NSL+
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLI 510
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 72/160 (45%), Gaps = 3/160 (1%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ ++I G KLG F+ A + M PN + +L+ + G A ++ +
Sbjct: 401 YSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLI 460
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G V Y +++ + + +EA E+F+ +++ + + P FN +IY Y K
Sbjct: 461 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE---TGITPSVATFNSLIYGYCKTQ 517
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNI 301
+ +ARK ++ G+ S V+Y +LM N +I
Sbjct: 518 NIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 9/157 (5%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F LI GY K + A K+L ++ G P+VVS T+LM+AY G + + + R M+
Sbjct: 506 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 565
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEA-----EEVFET----LLDDEKSPLKPDQKMFNM 252
G P+ VTY +I K +G K + E +FE L D E + PDQ +N
Sbjct: 566 AEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNT 625
Query: 253 MIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+I + A +M R ++ S+ TYN L+
Sbjct: 626 IIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILI 662
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 5/164 (3%)
Query: 128 WLRNQSWWDFGK--MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYG 185
+LR W D G + F +++GY KLG + A+ + K G P+V S L+
Sbjct: 209 FLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLC 268
Query: 186 KGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKP 245
G A + M K G EP +VTY ++ K F A EV +LD L P
Sbjct: 269 LVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLD---KGLSP 325
Query: 246 DQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
D + +++ + G+ D M RG E +++ S+M
Sbjct: 326 DVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 75/146 (51%), Gaps = 3/146 (2%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
++++G K G + A + M +G P++V+ + ++ K G+++ A ++ M
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
P++ T+ +L Q EA + ++L+ ++ D ++N++I Y K+G
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL---DIVLYNIVIDGYAKSGCI 484
Query: 264 DKARKTFALMAERGIEQSTVTYNSLM 289
++A + F ++ E GI S T+NSL+
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLI 510
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 72/160 (45%), Gaps = 3/160 (1%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ ++I G KLG F+ A + M PN + +L+ + G A ++ +
Sbjct: 401 YSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLI 460
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G V Y +++ + + +EA E+F+ +++ + + P FN +IY Y K
Sbjct: 461 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE---TGITPSVATFNSLIYGYCKTQ 517
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNI 301
+ +ARK ++ G+ S V+Y +LM N +I
Sbjct: 518 NIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 112/229 (48%), Gaps = 15/229 (6%)
Query: 76 KLMEQIDQAGS---AVSV---LSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWL 129
K+M + AG AV + L + L+ T +L++ TL + K++++ +V+ L
Sbjct: 160 KIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL-----L 214
Query: 130 RNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGR 189
+ +S F + I G+ K A + M +G+ P V+S T+++ Y +
Sbjct: 215 QLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFE 274
Query: 190 YNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKM 249
+ + M+ G P+++TY I+ + +F+EA V + ++S KPD
Sbjct: 275 FIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM---KRSGCKPDSLF 331
Query: 250 FNMMIYMYKKAGSYDKARKTFAL-MAERGIEQSTVTYNSLMSFETNYKE 297
+N +I+ +AG ++A + F + M E G+ +T TYNS+++ ++ E
Sbjct: 332 YNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDE 380
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 70/151 (46%), Gaps = 3/151 (1%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+ + +I Y + +F ++L+ M NG PPN ++ T++M + + A + R
Sbjct: 260 ISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATR 319
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M++ G +P ++ Y ++ T + + +EAE VF + + + + +N MI MY
Sbjct: 320 MKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSI--NTSTYNSMIAMYCH 377
Query: 260 AGSYDKARKTFALMAERGIEQSTV-TYNSLM 289
DKA + M + V TY L+
Sbjct: 378 HDEEDKAIELLKEMESSNLCNPDVHTYQPLL 408
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 91/215 (42%), Gaps = 9/215 (4%)
Query: 92 SDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGK 151
SDE K + LV L RF+ W + IL+W + + M + GK
Sbjct: 76 SDEICKRVNLSDGLVHKLLHRFRD--DWRSALGILKWAESCKGHKHSSDAYDMAVDILGK 133
Query: 152 LGDFNGAEKVLALMNKNGYPP-NVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAV 210
++ ++ + M + N V++ +M + G + A IF R+ +FG E +
Sbjct: 134 AKKWDRMKEFVERMRGDKLVTLNTVAK--IMRRFAGAGEWEEAVGIFDRLGEFGLEKNTE 191
Query: 211 TYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTF 270
+ L+L T + + ++A V L KS + P+ FN+ I+ + KA ++A T
Sbjct: 192 SMNLLLDTLCKEKRVEQARVVLLQL----KSHITPNAHTFNIFIHGWCKANRVEEALWTI 247
Query: 271 ALMAERGIEQSTVTYNSLMSFETNYKEVSNIYDQI 305
M G ++Y +++ E +Y+ +
Sbjct: 248 QEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEML 282
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 112/229 (48%), Gaps = 15/229 (6%)
Query: 76 KLMEQIDQAGS---AVSV---LSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWL 129
K+M + AG AV + L + L+ T +L++ TL + K++++ +V+ L
Sbjct: 160 KIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL-----L 214
Query: 130 RNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGR 189
+ +S F + I G+ K A + M +G+ P V+S T+++ Y +
Sbjct: 215 QLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFE 274
Query: 190 YNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKM 249
+ + M+ G P+++TY I+ + +F+EA V + ++S KPD
Sbjct: 275 FIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM---KRSGCKPDSLF 331
Query: 250 FNMMIYMYKKAGSYDKARKTFAL-MAERGIEQSTVTYNSLMSFETNYKE 297
+N +I+ +AG ++A + F + M E G+ +T TYNS+++ ++ E
Sbjct: 332 YNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDE 380
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 70/151 (46%), Gaps = 3/151 (1%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+ + +I Y + +F ++L+ M NG PPN ++ T++M + + A + R
Sbjct: 260 ISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATR 319
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M++ G +P ++ Y ++ T + + +EAE VF + + + + +N MI MY
Sbjct: 320 MKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSI--NTSTYNSMIAMYCH 377
Query: 260 AGSYDKARKTFALMAERGIEQSTV-TYNSLM 289
DKA + M + V TY L+
Sbjct: 378 HDEEDKAIELLKEMESSNLCNPDVHTYQPLL 408
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 91/215 (42%), Gaps = 9/215 (4%)
Query: 92 SDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGK 151
SDE K + LV L RF+ W + IL+W + + M + GK
Sbjct: 76 SDEICKRVNLSDGLVHKLLHRFRD--DWRSALGILKWAESCKGHKHSSDAYDMAVDILGK 133
Query: 152 LGDFNGAEKVLALMNKNGYPP-NVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAV 210
++ ++ + M + N V++ +M + G + A IF R+ +FG E +
Sbjct: 134 AKKWDRMKEFVERMRGDKLVTLNTVAK--IMRRFAGAGEWEEAVGIFDRLGEFGLEKNTE 191
Query: 211 TYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTF 270
+ L+L T + + ++A V L KS + P+ FN+ I+ + KA ++A T
Sbjct: 192 SMNLLLDTLCKEKRVEQARVVLLQL----KSHITPNAHTFNIFIHGWCKANRVEEALWTI 247
Query: 271 ALMAERGIEQSTVTYNSLMSFETNYKEVSNIYDQI 305
M G ++Y +++ E +Y+ +
Sbjct: 248 QEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEML 282
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 114/249 (45%), Gaps = 23/249 (9%)
Query: 60 TVFKDAADEAEKKNWWKLM--EQIDQAGSAVSVLSDEKLKNQTIPKDLVI---------- 107
+F+ A +E +W+ M + + + S+L D K + K L++
Sbjct: 382 ALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFP 441
Query: 108 -------GTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEK 160
+ + K++ E+ + L+ +++ + + ++I +GK G + A
Sbjct: 442 PCPAAYCSLINALGKAKRYEAANELFKELK-ENFGNVSSRVYAVMIKHFGKCGKLSEAVD 500
Query: 161 VLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFV 220
+ M G P+V + +LM K G N A ++ R+M++ G ++ +IL F
Sbjct: 501 LFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFA 560
Query: 221 QGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQ 280
+ + A E+FET+ + S +KPD +N ++ + AG +++A + M ++G E
Sbjct: 561 RTGVPRRAIEMFETI---KHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEY 617
Query: 281 STVTYNSLM 289
+TY+S++
Sbjct: 618 DAITYSSIL 626
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 11/167 (6%)
Query: 132 QSWWDFGKMD--------FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEA 183
SW+D K D + +LI GY K A +L M++ G+PP + SL+ A
Sbjct: 394 SSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINA 453
Query: 184 YGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPL 243
GK RY A +F+ +++ S+ Y +++K F + K EA ++F + +
Sbjct: 454 LGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSG-- 511
Query: 244 KPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
PD +N ++ KAG ++A M E G ++N +++
Sbjct: 512 -PDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILN 557
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 63/147 (42%), Gaps = 4/147 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G GK G + A M ++G P+VV +LM GK GR +F M +
Sbjct: 309 LIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWR 368
Query: 205 PEPSAVTYQLILKT-FVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
P+ V+Y ++K F E F+ + D S P + ++++I Y K
Sbjct: 369 CTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVS---PSEFTYSILIDGYCKTNRV 425
Query: 264 DKARKTFALMAERGIEQSTVTYNSLMS 290
+KA M E+G Y SL++
Sbjct: 426 EKALLLLEEMDEKGFPPCPAAYCSLIN 452
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 3/157 (1%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F ++I G K G N V M + G PNV T L++ Y K G +A + RM
Sbjct: 330 FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 389
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G +P VTY +++ + + +EA + F T D L + ++ +I KAG
Sbjct: 390 DEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFD---GLAINSMFYSSLIDGLGKAG 446
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEV 298
D+A + F M+E+G + + YN+L+ T +++V
Sbjct: 447 RVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKV 483
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Query: 128 WLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKG 187
W R Q + ++ L+ D + V + + K +P V + +L++++GK
Sbjct: 141 WSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKL 200
Query: 188 GRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQ 247
G ++R+M++ G EP+ TY ++ V AE VFE + E +KPD
Sbjct: 201 GMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVM---ESGRIKPDI 257
Query: 248 KMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+N MI Y KAG KA + M RG E +TY +++
Sbjct: 258 VTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMI 299
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 79/148 (53%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F L+ G+ ++G A+ VL MN+ G+ P++V T+L+ Y G+ +A + R M+
Sbjct: 255 FTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMR 314
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ G EP+A Y ++++ + D+ +EA +VF ++ E+ + D + ++ + K G
Sbjct: 315 RRGFEPNANCYTVLIQALCKVDRMEEAMKVF---VEMERYECEADVVTYTALVSGFCKWG 371
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
DK M ++G+ S +TY +M
Sbjct: 372 KIDKCYIVLDDMIKKGLMPSELTYMHIM 399
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 104/232 (44%), Gaps = 6/232 (2%)
Query: 72 KNWWKLMEQIDQAGSAVSVLSDEKLKN-QTIPKDLVIGTLVRFKQLKKWNLVIEILEWLR 130
K+ K++ ++ Q G+ ++ + + +N Q I +L + + RF IE+L+ +
Sbjct: 151 KSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEM- 209
Query: 131 NQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRY 190
+ ++ + F L+ K G A K+ M + +P N+ TSL+ + + G+
Sbjct: 210 PKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWCRVGKM 268
Query: 191 NNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMF 250
A+ + +M + G EP V Y +L + K +A ++ L D + +P+ +
Sbjct: 269 MEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADA---YDLLRDMRRRGFEPNANCY 325
Query: 251 NMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIY 302
++I K ++A K F M E VTY +L+S + ++ Y
Sbjct: 326 TVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCY 377
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 74/168 (44%), Gaps = 3/168 (1%)
Query: 131 NQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRY 190
N++ ++ +D+ L++GY G A +L M + G+ PN T L++A K R
Sbjct: 279 NEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRM 338
Query: 191 NNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMF 250
A +F M+++ E VTY ++ F + K + V + ++ K L P + +
Sbjct: 339 EEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMI---KKGLMPSELTY 395
Query: 251 NMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEV 298
++ ++K S+++ + M + YN ++ EV
Sbjct: 396 MHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEV 443
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 73 NWWKLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQ 132
N + + +++D+A + + P + TL+ K K+ V E +E R
Sbjct: 369 NGFCMHDRLDEAKQMFEFM----VSKHCFPDVVTYNTLI--KGFCKYKRVEEGMEVFREM 422
Query: 133 SWWDF--GKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRY 190
S + + +LI G + GD + A+++ M +G PPN+++ +L++ K G+
Sbjct: 423 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482
Query: 191 NNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMF 250
A +F +Q+ EP+ TY ++++ + K ++ ++F L +KPD +
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL---SLKGVKPDVVAY 539
Query: 251 NMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
N MI + + GS ++A F M E G ++ YN+L+
Sbjct: 540 NTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 6/148 (4%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
I + YG+ D A ++L+ M + P+V + ++L++A+ K G+ AE ++ M
Sbjct: 297 LISCLCNYGRWSD---ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
K +PS VTY ++ F D+ EA+++FE ++ PD +N +I + K
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH---CFPDVVTYNTLIKGFCKYK 410
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
++ + F M++RG+ +TVTYN L+
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILI 438
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F LI + K G AEK+ M K P++V+ +SL+ + R + A+ +F M
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 388
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
P VTY ++K F K+K EE E + + L + +N++I +AG
Sbjct: 389 SKHCFPDVVTYNTLIKGFC---KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
D A++ F M G+ + +TYN+L+
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLL 473
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 95/201 (47%), Gaps = 5/201 (2%)
Query: 91 LSDEKLKNQTIPKDLVIGTLVR-FKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGY 149
L DE +K P + +L+ F + + ++ E++ ++ + + + LI G+
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP-DVVTYNTLIKGF 406
Query: 150 GKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSA 209
K +V M++ G N V+ L++ + G + A+ IF+ M G P+
Sbjct: 407 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 466
Query: 210 VTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKT 269
+TY +L + K ++A VFE L ++S ++P +N+MI KAG +
Sbjct: 467 MTYNTLLDGLCKNGKLEKAMVVFEYL---QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 270 FALMAERGIEQSTVTYNSLMS 290
F ++ +G++ V YN+++S
Sbjct: 524 FCNLSLKGVKPDVVAYNTMIS 544
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 34/238 (14%)
Query: 91 LSDEKLKNQTIPKDLVIGTLVR-FKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGY 149
L E +K++ P + L+ ++ K+++VI + E ++N + +LI +
Sbjct: 68 LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGI-PHNHYTYSILINCF 126
Query: 150 GKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSA 209
+ A VL M K GY PN+V+ +SL+ Y R + A A+ +M G +P+
Sbjct: 127 CRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNT 186
Query: 210 VTYQLILKTFVQGDKFKEA--------------------------------EEVFETLLD 237
VT+ ++ +K EA + F L
Sbjct: 187 VTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNK 246
Query: 238 DEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNY 295
E+ L+P ++N +I K D A F M +GI + VTY+SL+S NY
Sbjct: 247 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 3/161 (1%)
Query: 138 GKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIF 197
G + + +I G K + A + M G PNVV+ +SL+ GR+++A +
Sbjct: 255 GVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLL 314
Query: 198 RRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMY 257
M + P T+ ++ FV+ K EAE++++ ++ K + P ++ +I +
Sbjct: 315 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV---KRSIDPSIVTYSSLINGF 371
Query: 258 KKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEV 298
D+A++ F M + VTYN+L+ YK V
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 412
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 74/147 (50%), Gaps = 3/147 (2%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
+++ G K GD + A +L M + P V+ ++++ K ++A +F+ M+
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 285
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
G P+ VTY ++ ++ +A + +++ + + PD F+ +I + K G
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK---INPDVFTFSALIDAFVKEGKL 342
Query: 264 DKARKTFALMAERGIEQSTVTYNSLMS 290
+A K + M +R I+ S VTY+SL++
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLIN 369
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 6/146 (4%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G+ +LG A K+L ++ +G P+V++ ++ Y K G NNA ++ RM
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS--- 199
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P VTY IL++ K K+A EV + +L + PD + ++I +
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD---CYPDVITYTILIEATCRDSGVG 256
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
A K M +RG VTYN L++
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVN 282
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 105/232 (45%), Gaps = 17/232 (7%)
Query: 59 NTVFKDAADEAEKKNWWKLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKK 118
NT+ + D + K ++++++ Q V++ L T +D +G
Sbjct: 208 NTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATC-RDSGVGH--------- 257
Query: 119 WNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQT 178
+++L+ +R++ + + +L+ G K G + A K L M +G PNV++
Sbjct: 258 ---AMKLLDEMRDRGCTP-DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN 313
Query: 179 SLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDD 238
++ + GR+ +AE + M + G PS VT+ +++ + A ++ E +
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM--- 370
Query: 239 EKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
+ +P+ +N +++ + K D+A + M RG VTYN++++
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 93/224 (41%), Gaps = 41/224 (18%)
Query: 101 IPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEK 160
IP +I R + +K ++EILE + + D + + ++I+GY K G+ N A
Sbjct: 138 IPCTTLIRGFCRLGKTRKAAKILEILEG--SGAVPDV--ITYNVMISGYCKAGEINNALS 193
Query: 161 VLALMN---------------------------------KNGYPPNVVSQTSLMEAYGKG 187
VL M+ ++ YP +V++ T L+EA +
Sbjct: 194 VLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP-DVITYTILIEATCRD 252
Query: 188 GRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQ 247
+A + M+ G P VTY +++ + + EA + L D S +P+
Sbjct: 253 SGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA---IKFLNDMPSSGCQPNV 309
Query: 248 KMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSF 291
N+++ G + A K A M +G S VT+N L++F
Sbjct: 310 ITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINF 353
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F +LI + G A +L M ++G PN +S L+ + K + + A RM
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G P VTY +L + K ++A E+ L SP+ +N +I KAG
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV---LITYNTVIDGLAKAG 463
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
KA K M + ++ T+TY+SL+
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLV 491
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 101/227 (44%), Gaps = 13/227 (5%)
Query: 85 GSAVSVLSDEKLKNQTI-PKDLVIGTLVR-FKQLKKWNLVIEILEWLRNQSWW-DFGKMD 141
G A+ +L EK+ P L L+ F + KK + IE LE + ++ + D +
Sbjct: 361 GRAIDIL--EKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDI--VT 416
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ ++T K G A ++L ++ G P +++ ++++ K G+ A + M+
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+P +TY ++ + K EA + F E+ ++P+ FN ++ K+
Sbjct: 477 AKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF---ERMGIRPNAVTFNSIMLGLCKSR 533
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSL---MSFETNYKEVSNIYDQI 305
D+A M RG + + +Y L +++E KE + +++
Sbjct: 534 QTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
++I YG ++ +++L M G PNVV+ T+L++ YGK GR+N+A M+
Sbjct: 519 IMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSV 578
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
G +PS+ Y ++ + Q ++A F + D LKP N +I + +
Sbjct: 579 GLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSD---GLKPSLLALNSLINAFGEDRRD 635
Query: 264 DKARKTFALMAERGIEQSTVTYNSLM 289
+A M E G++ VTY +LM
Sbjct: 636 AEAFAVLQYMKENGVKPDVVTYTTLM 661
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ GY K G AE +++ M K G P+ + + L++AY GR+ +A + + M+
Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 404
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+P++ + +L F D+ E ++ F+ L + + +KPD++ +N++I + K D
Sbjct: 405 VQPNSFVFSRLLAGF--RDR-GEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLD 461
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
A TF M GIE VT+N+L+
Sbjct: 462 HAMTTFDRMLSEGIEPDRVTWNTLI 486
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 102/210 (48%), Gaps = 5/210 (2%)
Query: 81 IDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKM 140
I++A + ++ + + ++ + LVI +L R ++ L+ E R++ D +
Sbjct: 213 IEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLV 272
Query: 141 DFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRM 200
+ I I G+ K GD + A ++L + G + S++ A GR AEA+F +
Sbjct: 273 NDI--IMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEEL 330
Query: 201 QKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKA 260
++ G +P Y +LK +V+ K+AE + + EK + PD+ ++++I Y A
Sbjct: 331 RQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEM---EKRGVSPDEHTYSLLIDAYVNA 387
Query: 261 GSYDKARKTFALMAERGIEQSTVTYNSLMS 290
G ++ AR M ++ ++ ++ L++
Sbjct: 388 GRWESARIVLKEMEAGDVQPNSFVFSRLLA 417
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 85/161 (52%), Gaps = 6/161 (3%)
Query: 95 KLKNQTIPKDLVIGTLVR--FKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKL 152
K+K+Q I ++V T + + + ++N IE LE +++ M + LI Y +
Sbjct: 539 KMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTM-YNALINAYAQR 597
Query: 153 GDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTY 212
G A +M +G P++++ SL+ A+G+ R A A+ + M++ G +P VTY
Sbjct: 598 GLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTY 657
Query: 213 QLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMM 253
++K ++ DKF++ V+E ++ S KPD+K +M+
Sbjct: 658 TTLMKALIRVDKFQKVPVVYEEMI---MSGCKPDRKARSML 695
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI + K G AE++ M + G P + ++ +YG R+++ + + +M+ G
Sbjct: 485 LIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQG 544
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ VT+ ++ + + +F +A E E + + LKP M+N +I Y + G +
Sbjct: 545 ILPNVVTHTTLVDVYGKSGRFNDAIECLEEM---KSVGLKPSSTMYNALINAYAQRGLSE 601
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
+A F +M G++ S + NSL++
Sbjct: 602 QAVNAFRVMTSDGLKPSLLALNSLIN 627
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F L+ G+ G++ +VL M G P+ +++ +GK ++A F RM
Sbjct: 412 FSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRML 471
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G EP VT+ ++ + + AEE+FE + E+ P +N+MI Y
Sbjct: 472 SEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAM---ERRGCLPCATTYNIMINSYGDQE 528
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
+D ++ M +GI + VT+ +L+
Sbjct: 529 RWDDMKRLLGKMKSQGILPNVVTHTTLV 556
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 3/149 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ +LI Y G + A VL M PN + L+ + G + + + M+
Sbjct: 377 YSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMK 436
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G +P Y +++ TF + + A F+ +L + ++PD+ +N +I + K G
Sbjct: 437 SIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSE---GIEPDRVTWNTLIDCHCKHG 493
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMS 290
+ A + F M RG TYN +++
Sbjct: 494 RHIVAEEMFEAMERRGCLPCATTYNIMIN 522
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 3/149 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F LI GY K G A +V M + G PNVV+ T+L++ K G ++A + M
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
K G +P+ TY I+ + +EA ++ E + L D + ++ Y K+G
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF---EAAGLNADTVTYTTLMDAYCKSG 540
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMS 290
DKA++ M +G++ + VT+N LM+
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
++I +LG A +L LM GY P+V+S ++++ Y + G + + M++
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
G +P++ Y I+ + K EAEE F ++ + + PD ++ +I + K G
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI---RQGILPDTVVYTTLIDGFCKRGDI 367
Query: 264 DKARKTFALMAERGIEQSTVTYNSLMS 290
A K F M R I +TY +++S
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIIS 394
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 96/218 (44%), Gaps = 7/218 (3%)
Query: 73 NWWKLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQ 132
N + ++D+ + V+ + LK + +IG L R +L + E +R
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS--EMIRQG 346
Query: 133 SWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNN 192
D + + LI G+ K GD A K M+ P+V++ T+++ + + G
Sbjct: 347 ILPD--TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404
Query: 193 AEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNM 252
A +F M G EP +VT+ ++ + + K+A V ++ ++ P+ +
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI---QAGCSPNVVTYTT 461
Query: 253 MIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
+I K G D A + M + G++ + TYNS+++
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
++ G K G+ A K++ G + V+ T+LM+AY K G + A+ I + M G
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+P+ VT+ +++ F ++ E++ +L + P+ FN ++ Y +
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML---AKGIAPNATTFNSLVKQYCIRNNLK 613
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
A + M RG+ TY +L+
Sbjct: 614 AATAIYKDMCSRGVGPDGKTYENLV 638
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+ + ++ GY + G+ + K++ +M + G PN S++ + + AE F
Sbjct: 282 ISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSE 341
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M + G P V Y ++ F + + A + F + + PD + +I + +
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM---HSRDITPDVLTYTAIISGFCQ 398
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
G +A K F M +G+E +VT+ L++
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 3/149 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F LI GY K G A +V M + G PNVV+ T+L++ K G ++A + M
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
K G +P+ TY I+ + +EA ++ E + L D + ++ Y K+G
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF---EAAGLNADTVTYTTLMDAYCKSG 540
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMS 290
DKA++ M +G++ + VT+N LM+
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
++I +LG A +L LM GY P+V+S ++++ Y + G + + M++
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
G +P++ Y I+ + K EAEE F ++ + + PD ++ +I + K G
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI---RQGILPDTVVYTTLIDGFCKRGDI 367
Query: 264 DKARKTFALMAERGIEQSTVTYNSLMS 290
A K F M R I +TY +++S
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIIS 394
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 96/218 (44%), Gaps = 7/218 (3%)
Query: 73 NWWKLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQ 132
N + ++D+ + V+ + LK + +IG L R +L + E +R
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS--EMIRQG 346
Query: 133 SWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNN 192
D + + LI G+ K GD A K M+ P+V++ T+++ + + G
Sbjct: 347 ILPD--TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404
Query: 193 AEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNM 252
A +F M G EP +VT+ ++ + + K+A V ++ ++ P+ +
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI---QAGCSPNVVTYTT 461
Query: 253 MIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
+I K G D A + M + G++ + TYNS+++
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
++ G K G+ A K++ G + V+ T+LM+AY K G + A+ I + M G
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+P+ VT+ +++ F ++ E++ +L + P+ FN ++ Y +
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML---AKGIAPNATTFNSLVKQYCIRNNLK 613
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
A + M RG+ TY +L+
Sbjct: 614 AATAIYKDMCSRGVGPDGKTYENLV 638
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+ + ++ GY + G+ + K++ +M + G PN S++ + + AE F
Sbjct: 282 ISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSE 341
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M + G P V Y ++ F + + A + F + + PD + +I + +
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM---HSRDITPDVLTYTAIISGFCQ 398
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
G +A K F M +G+E +VT+ L++
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 120/265 (45%), Gaps = 39/265 (14%)
Query: 78 MEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDF 137
+ +ID + ++ + L+ I ++VI L R ++K+ + V+ + N+ +
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM----NRRGYSL 308
Query: 138 GKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIF 197
++ + LI GY K G+F+ A + A M ++G P+V++ TSL+ + K G N A
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 198 RRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSP--------------- 242
+M+ G P+ TY ++ F Q EA V + D+ SP
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 243 -----------------LKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTY 285
L PD ++ ++ + ++ D+A + M E+GI+ T+TY
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488
Query: 286 NSLM---SFETNYKEVSNIYDQILK 307
+SL+ + KE ++Y+++L+
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLR 513
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 103/237 (43%), Gaps = 40/237 (16%)
Query: 90 VLSDEKLKNQTIPKDLVIGTLVR-FKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITG 148
V+ E L++ P + +L+ + N +E L+ +R + + + L+ G
Sbjct: 331 VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCP-NERTYTTLVDG 389
Query: 149 YGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPS 208
+ + G N A +VL MN NG+ P+VV+ +L+ + G+ +A A+ M++ G P
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Query: 209 AVTYQLILKTF-------------------------------VQG----DKFKEAEEVFE 233
V+Y +L F +QG + KEA +++E
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE 509
Query: 234 TLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
+L + L PD+ + +I Y G +KA + M E+G+ VTY+ L++
Sbjct: 510 EML---RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLIN 563
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 10/217 (4%)
Query: 75 WKLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKW--NLVIEILEWLRNQ 132
+ + ID+A S V + + + V+ +R K+ + N+ E+LE +
Sbjct: 144 YSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSP 203
Query: 133 SWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNN 192
+ + + +LI G+ G+ + A + M G PNVV+ +L++ Y K + ++
Sbjct: 204 NVFTYN-----ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDD 258
Query: 193 AEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNM 252
+ R M G EP+ ++Y +++ + + KE V L + + D+ +N
Sbjct: 259 GFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV---LTEMNRRGYSLDEVTYNT 315
Query: 253 MIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+I Y K G++ +A A M G+ S +TY SL+
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLI 352
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 18/163 (11%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ LI Y GD A ++ M + G P+VV+ + L+ K R A+ + ++
Sbjct: 523 YTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF 582
Query: 202 KFGPEPSAVTYQL---------------ILKTFVQGDKFKEAEEVFETLLDDEKSPLKPD 246
PS VTY ++K F EA++VFE++L KPD
Sbjct: 583 YEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNH---KPD 639
Query: 247 QKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+N+MI+ + +AG KA + M + G TVT +L+
Sbjct: 640 GTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALV 682
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 7/168 (4%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGR-YNNAEAIFRRM 200
F +++ Y +L + A ++ L +G+ P V+S ++++A + R + AE +F+ M
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 201 QKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKA 260
+ P+ TY ++++ F A +F+ + E P+ +N +I Y K
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM---ETKGCLPNVVTYNTLIDGYCKL 253
Query: 261 GSYDKARKTFALMAERGIEQSTVTYNSL---MSFETNYKEVSNIYDQI 305
D K MA +G+E + ++YN + + E KEVS + ++
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM 301
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 5/197 (2%)
Query: 94 EKLKNQTIPKDLVIGTLVR-FKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKL 152
E L++Q P L+R F ++ + + + + + + + LI GY KL
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLP-NVVTYNTLIDGYCKL 253
Query: 153 GDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTY 212
+ K+L M G PN++S ++ + GR + M + G VTY
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313
Query: 213 QLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFAL 272
++K + + F +A + +L + L P + +I+ KAG+ ++A +
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEML---RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 273 MAERGIEQSTVTYNSLM 289
M RG+ + TY +L+
Sbjct: 371 MRVRGLCPNERTYTTLV 387
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 79/148 (53%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ L+ G ++ A ++L+ M K PNV++ ++L++A+ K G+ A+ +F M
Sbjct: 228 YTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ +P VTY ++ D+ EA ++F+ ++ K L D +N +I + KA
Sbjct: 288 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV--SKGCL-ADVVSYNTLINGFCKAK 344
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
+ K F M++RG+ +TVTYN+L+
Sbjct: 345 RVEDGMKLFREMSQRGLVSNTVTYNTLI 372
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 3/136 (2%)
Query: 165 MNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDK 224
+ + G PNVV+ T+L+ R+++A + M K P+ +TY +L FV+ K
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
Query: 225 FKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVT 284
EA+E+FE ++ + + PD ++ +I D+A + F LM +G V+
Sbjct: 276 VLEAKELFEEMV---RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS 332
Query: 285 YNSLMSFETNYKEVSN 300
YN+L++ K V +
Sbjct: 333 YNTLINGFCKAKRVED 348
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G+ K K+ M++ G N V+ +L++ + + G + A+ F +M FG
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P TY ++L + ++A +FE D +K + D + +I K G +
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFE---DMQKREMDLDIVTYTTVIRGMCKTGKVE 452
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
+A F ++ +G++ VTY ++MS
Sbjct: 453 EAWSLFCSLSLKGLKPDIVTYTTMMS 478
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G + A ++ LM G +VVS +L+ + K R + +FR M + G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+ VTY +++ F Q +A+E F + + + PD +N+++ G +
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM---DFFGISPDIWTYNILLGGLCDNGELE 417
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
KA F M +R ++ VTY +++
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVI 442
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 3/153 (1%)
Query: 137 FGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAI 196
F + ++I+G+ KLG+ EKVL M ++G+ P+ +S + L+E G+ GR N++ I
Sbjct: 253 FDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEI 312
Query: 197 FRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYM 256
F ++ G P A Y ++ F+ F E+ + +LD+E +P+ + ++ ++
Sbjct: 313 FDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEE---CEPNLETYSKLVSG 369
Query: 257 YKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
K A + F M RG+ +T S +
Sbjct: 370 LIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFL 402
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 78/150 (52%), Gaps = 3/150 (2%)
Query: 151 KLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAV 210
K G+ A+ + M++ G PNV++ +++++ GR+++A+ + R M + P V
Sbjct: 22 KDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIV 81
Query: 211 TYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTF 270
T+ ++ FV+ K EAEE+++ +L + + P +N MI + K D A++
Sbjct: 82 TFSALINAFVKERKVSEAEEIYKEML---RWSIFPTTITYNSMIDGFCKQDRVDDAKRML 138
Query: 271 ALMAERGIEQSTVTYNSLMSFETNYKEVSN 300
MA +G VT+++L++ K V N
Sbjct: 139 DSMASKGCSPDVVTFSTLINGYCKAKRVDN 168
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
+I + G ++ A+++L M + P++V+ ++L+ A+ K + + AE I++ M ++
Sbjct: 51 MIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWS 110
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ +TY ++ F + D+ +A+ + +++ PD F+ +I Y KA D
Sbjct: 111 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSM---ASKGCSPDVVTFSTLINGYCKAKRVD 167
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
+ F M RGI +TVTY +L+
Sbjct: 168 NGMEIFCEMHRRGIVANTVTYTTLI 192
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 10/133 (7%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
+I G+ K + A+++L M G P+VV+ ++L+ Y K R +N IF M + G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG--S 262
+ VTY ++ F Q A+++ ++ + PD F+ M+ AG S
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI---SCGVAPDYITFHCML-----AGLCS 232
Query: 263 YDKARKTFALMAE 275
+ RK FA++ +
Sbjct: 233 KKELRKAFAILED 245
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 66/125 (52%), Gaps = 3/125 (2%)
Query: 165 MNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDK 224
M ++ +VV T++++ K G + NA+ +F M + G P+ +TY ++ +F +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 225 FKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVT 284
+ +A+++ +++ + + PD F+ +I + K +A + + M I +T+T
Sbjct: 61 WSDADQLLRHMIEKQ---INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTIT 117
Query: 285 YNSLM 289
YNS++
Sbjct: 118 YNSMI 122
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ Y + G GA ++ +LM G P+ S +++AYG+ G +++AEA+F M++ G
Sbjct: 362 LMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLG 421
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ ++ L+L + + + E + + + ++ ++PD + N M+ +Y + G +
Sbjct: 422 IAPTMKSHMLLLSAYSKARDVTKCEAIVKEM---SENGVEPDTFVLNSMLNLYGRLGQFT 478
Query: 265 KARKTFALMAERGIEQSTVTYNSLMSF 291
K K A M TYN L++
Sbjct: 479 KMEKILAEMENGPCTADISTYNILINI 505
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 3/150 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ L+ + + G AE++ + ++G P+V +LME+Y + G A IF MQ
Sbjct: 324 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQ 383
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G EP +Y +++ + + +AE VFE + ++ + P K +++ Y KA
Sbjct: 384 HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEM---KRLGIAPTMKSHMLLLSAYSKAR 440
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSF 291
K M+E G+E T NS+++
Sbjct: 441 DVTKCEAIVKEMSENGVEPDTFVLNSMLNL 470
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 77/156 (49%), Gaps = 3/156 (1%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
++I YGK + K+ M + PN+ + T+L+ A+ + G AE IF ++Q+
Sbjct: 291 LMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED 350
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
G EP Y +++++ + A E+F + + +PD+ +N+M+ Y +AG +
Sbjct: 351 GLEPDVYVYNALMESYSRAGYPYGAAEIFSLM---QHMGCEPDRASYNIMVDAYGRAGLH 407
Query: 264 DKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVS 299
A F M GI + ++ L+S + ++V+
Sbjct: 408 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 443
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 3/149 (2%)
Query: 139 KMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFR 198
+ + +++ YG+ G + AE V M + G P + S L+ AY K EAI +
Sbjct: 391 RASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVK 450
Query: 199 RMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYK 258
M + G EP +L + + +F + E++ L + E P D +N++I +Y
Sbjct: 451 EMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKI---LAEMENGPCTADISTYNILINIYG 507
Query: 259 KAGSYDKARKTFALMAERGIEQSTVTYNS 287
KAG ++ + F + E+ VT+ S
Sbjct: 508 KAGFLERIEELFVELKEKNFRPDVVTWTS 536
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 9/192 (4%)
Query: 104 DLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLA 163
D +I V+ + KKW+ +I + EW+ +S + + F +LI YG+ + AE +
Sbjct: 142 DDLINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYV 201
Query: 164 LMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQG- 222
+ ++ Y P + L++AY G AE + MQ P + + +++G
Sbjct: 202 QLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVT-VYNAYIEGL 260
Query: 223 ----DKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGI 278
+EA +VF+ + D KP + +N+MI +Y KA + K + M
Sbjct: 261 MKRKGNTEEAIDVFQRMKRDR---CKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQC 317
Query: 279 EQSTVTYNSLMS 290
+ + TY +L++
Sbjct: 318 KPNICTYTALVN 329
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 3/137 (2%)
Query: 153 GDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTY 212
G+ A V M ++ P + ++ YGK + + ++ M+ +P+ TY
Sbjct: 265 GNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTY 324
Query: 213 QLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFAL 272
++ F + ++AEE+FE L +D L+PD ++N ++ Y +AG A + F+L
Sbjct: 325 TALVNAFAREGLCEKAEEIFEQLQED---GLEPDVYVYNALMESYSRAGYPYGAAEIFSL 381
Query: 273 MAERGIEQSTVTYNSLM 289
M G E +YN ++
Sbjct: 382 MQHMGCEPDRASYNIMV 398
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 74/160 (46%), Gaps = 5/160 (3%)
Query: 143 IMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQK 202
++L++ Y K D E ++ M++NG P+ S++ YG+ G++ E I M+
Sbjct: 430 MLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMEN 489
Query: 203 FGPEPSAV-TYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
GP + + TY +++ + + + EE+F L ++ +PD + I Y +
Sbjct: 490 -GPCTADISTYNILINIYGKAGFLERIEELFVEL---KEKNFRPDVVTWTSRIGAYSRKK 545
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNI 301
Y K + F M + G T L+S ++ ++V +
Sbjct: 546 LYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQV 585
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ Y + G GA ++ +LM G P+ S +++AYG+ G +++AEA+F M++ G
Sbjct: 340 LMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLG 399
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ ++ L+L + + + E + + + ++ ++PD + N M+ +Y + G +
Sbjct: 400 IAPTMKSHMLLLSAYSKARDVTKCEAIVKEM---SENGVEPDTFVLNSMLNLYGRLGQFT 456
Query: 265 KARKTFALMAERGIEQSTVTYNSLMSF 291
K K A M TYN L++
Sbjct: 457 KMEKILAEMENGPCTADISTYNILINI 483
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 3/150 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ L+ + + G AE++ + ++G P+V +LME+Y + G A IF MQ
Sbjct: 302 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQ 361
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G EP +Y +++ + + +AE VFE + ++ + P K +++ Y KA
Sbjct: 362 HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEM---KRLGIAPTMKSHMLLLSAYSKAR 418
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSF 291
K M+E G+E T NS+++
Sbjct: 419 DVTKCEAIVKEMSENGVEPDTFVLNSMLNL 448
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 77/156 (49%), Gaps = 3/156 (1%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
++I YGK + K+ M + PN+ + T+L+ A+ + G AE IF ++Q+
Sbjct: 269 LMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED 328
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
G EP Y +++++ + A E+F + + +PD+ +N+M+ Y +AG +
Sbjct: 329 GLEPDVYVYNALMESYSRAGYPYGAAEIFSLM---QHMGCEPDRASYNIMVDAYGRAGLH 385
Query: 264 DKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVS 299
A F M GI + ++ L+S + ++V+
Sbjct: 386 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 421
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 3/149 (2%)
Query: 139 KMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFR 198
+ + +++ YG+ G + AE V M + G P + S L+ AY K EAI +
Sbjct: 369 RASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVK 428
Query: 199 RMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYK 258
M + G EP +L + + +F + E++ L + E P D +N++I +Y
Sbjct: 429 EMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKI---LAEMENGPCTADISTYNILINIYG 485
Query: 259 KAGSYDKARKTFALMAERGIEQSTVTYNS 287
KAG ++ + F + E+ VT+ S
Sbjct: 486 KAGFLERIEELFVELKEKNFRPDVVTWTS 514
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 9/192 (4%)
Query: 104 DLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLA 163
D +I V+ + KKW+ +I + EW+ +S + + F +LI YG+ + AE +
Sbjct: 120 DDLINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYV 179
Query: 164 LMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQG- 222
+ ++ Y P + L++AY G AE + MQ P + + +++G
Sbjct: 180 QLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVT-VYNAYIEGL 238
Query: 223 ----DKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGI 278
+EA +VF+ + D KP + +N+MI +Y KA + K + M
Sbjct: 239 MKRKGNTEEAIDVFQRMKRDR---CKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQC 295
Query: 279 EQSTVTYNSLMS 290
+ + TY +L++
Sbjct: 296 KPNICTYTALVN 307
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 3/137 (2%)
Query: 153 GDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTY 212
G+ A V M ++ P + ++ YGK + + ++ M+ +P+ TY
Sbjct: 243 GNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTY 302
Query: 213 QLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFAL 272
++ F + ++AEE+FE L +D L+PD ++N ++ Y +AG A + F+L
Sbjct: 303 TALVNAFAREGLCEKAEEIFEQLQED---GLEPDVYVYNALMESYSRAGYPYGAAEIFSL 359
Query: 273 MAERGIEQSTVTYNSLM 289
M G E +YN ++
Sbjct: 360 MQHMGCEPDRASYNIMV 376
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 74/160 (46%), Gaps = 5/160 (3%)
Query: 143 IMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQK 202
++L++ Y K D E ++ M++NG P+ S++ YG+ G++ E I M+
Sbjct: 408 MLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMEN 467
Query: 203 FGPEPSAV-TYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
GP + + TY +++ + + + EE+F L ++ +PD + I Y +
Sbjct: 468 -GPCTADISTYNILINIYGKAGFLERIEELFVEL---KEKNFRPDVVTWTSRIGAYSRKK 523
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNI 301
Y K + F M + G T L+S ++ ++V +
Sbjct: 524 LYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQV 563
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 112/227 (49%), Gaps = 13/227 (5%)
Query: 68 EAEKKNWWKLMEQIDQAGSAV------SVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNL 121
+ E+ ++ ++E + AG + S + ++ + T+ + V L + KQ+ +
Sbjct: 404 KGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHD 463
Query: 122 VIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLM 181
+ E ++ ++ D + +LI +G++G+ + A + + ++ P+++S SL+
Sbjct: 464 LFEKMK--KDGPSPDI--FTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLI 519
Query: 182 EAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKS 241
GK G + A F+ MQ+ G P VTY +++ F + ++ + A +FE +L
Sbjct: 520 NCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEML---VK 576
Query: 242 PLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSL 288
+P+ +N+++ +K G +A ++ M ++G+ ++TY L
Sbjct: 577 GCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 6/150 (4%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
M + + G GK + A ++L+ +++ G + + ++ A GK + ++ +F +
Sbjct: 411 MSMLESLCGAGKTIE---AIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEK 467
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M+K GP P TY +++ +F + + EA +FE L E+S KPD +N +I K
Sbjct: 468 MKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEEL---ERSDCKPDIISYNSLINCLGK 524
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLM 289
G D+A F M E+G+ VTY++LM
Sbjct: 525 NGDVDEAHVRFKEMQEKGLNPDVVTYSTLM 554
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 9/196 (4%)
Query: 95 KLKNQTIPKDLVIGTLVRFKQLK-KWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLG 153
K++ + VI +L +++ + NL E+ + + + I + YG+
Sbjct: 235 KIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL--ISCLCNYGRWS 292
Query: 154 DFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQ 213
D A ++L+ M + PNVV+ SL++A+ K G+ AE +F M + +P+ VTY
Sbjct: 293 D---ASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349
Query: 214 LILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALM 273
++ F D+ EA+++F ++ + PD +N +I + KA + F M
Sbjct: 350 SLINGFCMHDRLDEAQQIFTLMVSKD---CLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Query: 274 AERGIEQSTVTYNSLM 289
+ RG+ +TVTY +L+
Sbjct: 407 SRRGLVGNTVTYTTLI 422
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 105/220 (47%), Gaps = 13/220 (5%)
Query: 73 NWWKLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVR-FKQLKKWNLVIEILEWLRN 131
N + + +++D+A +++ + +P + TL+ F + KK V++ +E R+
Sbjct: 353 NGFCMHDRLDEAQQIFTLM----VSKDCLPDVVTYNTLINGFCKAKK---VVDGMELFRD 405
Query: 132 QSWWDF--GKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGR 189
S + + LI G+ + D + A+ V M +G PN+++ +L++ K G+
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Query: 190 YNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKM 249
A +F +QK EP TY ++ + + K ++ ++F +L +KPD
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL---SLKGVKPDVIA 522
Query: 250 FNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+N MI + K G ++A F M E G + TYN+L+
Sbjct: 523 YNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 75/146 (51%), Gaps = 3/146 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G+ K ++ M++ G N V+ T+L+ + + +NA+ +F++M G
Sbjct: 386 LINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG 445
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ +TY +L + K ++A VFE L +KS ++PD +N+M KAG +
Sbjct: 446 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL---QKSKMEPDIYTYNIMSEGMCKAGKVE 502
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
F ++ +G++ + YN+++S
Sbjct: 503 DGWDLFCSLSLKGVKPDVIAYNTMIS 528
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 25/232 (10%)
Query: 76 KLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVR-FKQLKKWNLVI------EILEW 128
KL E +D G E +K++ P + L+ ++KK++LVI EIL
Sbjct: 45 KLDEAVDLFG--------EMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGV 96
Query: 129 LRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGG 188
N ++ ++I + + A +L M K GY P++V+ SL+ + G
Sbjct: 97 SHNLYTYN-------IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 149
Query: 189 RYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQK 248
R + A A+ +M + G +P VT+ ++ Q +K EA + E ++ +PD
Sbjct: 150 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMV---VKGCQPDLV 206
Query: 249 MFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSN 300
+ +I K G D A M + IE V Y++++ Y+ V +
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDD 258
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Query: 165 MNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDK 224
M+ G P+V + +SL+ GR+++A + M + P+ VT+ ++ F + K
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325
Query: 225 FKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVT 284
EAE++F+ ++ + + P+ +N +I + D+A++ F LM + VT
Sbjct: 326 LIEAEKLFDEMI---QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT 382
Query: 285 YNSLMS 290
YN+L++
Sbjct: 383 YNTLIN 388
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 78/172 (45%), Gaps = 12/172 (6%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNK---NGYPPNVVSQTSLMEAYGKGGRYNNAEAIFR 198
F L+ G L N A + +AL+ + G P++V+ +++ K G + A +
Sbjct: 173 FTTLVHG---LFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLN 229
Query: 199 RMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYK 258
+M+K E V Y ++ + K++ ++ + + ++PD ++ +I
Sbjct: 230 KMEKGKIEADVVIYSTVIDSLC---KYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 259 KAGSYDKARKTFALMAERGIEQSTVTYNSLMSF---ETNYKEVSNIYDQILK 307
G + A + + M ER I + VT+NSL+ E E ++D++++
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
+I + + G + AE++L M + P+VV+ ++L+ A K G+ + AE I+ M + G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ +TY ++ F + D+ +A+ + +++ S PD F+ +I Y KA D
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCS---PDVVTFSTLINGYCKAKRVD 233
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
+ F M RGI +TVTY +L+
Sbjct: 234 NGMEIFCEMHRRGIVANTVTYTTLI 258
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Query: 138 GKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIF 197
G + +I G K+GD A +L+ M + +VV ++++ K G + +A+ +F
Sbjct: 40 GHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLF 99
Query: 198 RRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMY 257
M G P +TY ++ +F + ++ +AE++ +++ + + PD F+ +I
Sbjct: 100 TEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQ---INPDVVTFSALINAL 156
Query: 258 KKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
K G +A + + M RGI +T+TYNS++
Sbjct: 157 VKEGKVSEAEEIYGDMLRRGIFPTTITYNSMI 188
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/157 (19%), Positives = 71/157 (45%), Gaps = 3/157 (1%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F LI K G + AE++ M + G P ++ S+++ + K R N+A+ + M
Sbjct: 149 FSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMA 208
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
P VT+ ++ + + + E+F + + + + + +I+ + + G
Sbjct: 209 SKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM---HRRGIVANTVTYTTLIHGFCQVG 265
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEV 298
D A+ +M G+ + +T+ S+++ + KE+
Sbjct: 266 DLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKEL 302
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
+I G+ K N A+++L M P+VV+ ++L+ Y K R +N IF M + G
Sbjct: 187 MIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 246
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+ VTY ++ F Q A+++ ++ S + P+ F M+ S
Sbjct: 247 IVANTVTYTTLIHGFCQVGDLDAAQDLLNVMI---SSGVAPNYITFQSML---ASLCSKK 300
Query: 265 KARKTFALMAE 275
+ RK FA++ +
Sbjct: 301 ELRKAFAILED 311
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 167 KNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFK 226
K+ + P+V+ T+L+ + + G + AE +F+ M+ G EP+ TY +++ + +
Sbjct: 248 KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQIS 307
Query: 227 EAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYN 286
A +VF +LD S P+ FN ++ ++ KAG +K + + M + G E T+TYN
Sbjct: 308 RAHDVFADMLD---SGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYN 364
Query: 287 SLM 289
L+
Sbjct: 365 FLI 367
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 72/148 (48%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ ++I + G + A V A M +G PN ++ +LM + K GR ++ +M+
Sbjct: 293 YSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMK 352
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
K G EP +TY +++ + + + A +V T++ K + + FN + +K
Sbjct: 353 KLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMI---KKKCEVNASTFNTIFRYIEKKR 409
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
+ A + ++ M E E +TVTYN LM
Sbjct: 410 DVNGAHRMYSKMMEAKCEPNTVTYNILM 437
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 81/158 (51%), Gaps = 3/158 (1%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ G+ + G+ + AEKV M G PNV + + +++A + G+ + A +F M G
Sbjct: 261 LVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSG 320
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+A+T+ +++ V+ + ++ +V+ + +K +PD +N +I + + + +
Sbjct: 321 CAPNAITFNNLMRVHVKAGRTEKVLQVYNQM---KKLGCEPDTITYNFLIEAHCRDENLE 377
Query: 265 KARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIY 302
A K M ++ E + T+N++ + ++V+ +
Sbjct: 378 NAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAH 415
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 75/159 (47%), Gaps = 4/159 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
+I GK+ F+ A ++ LM ++ + T L+ Y + G + A F RM+ +G
Sbjct: 157 MIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYG 216
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P + + +++ + + EA+ F++L K +PD ++ ++ + +AG
Sbjct: 217 CVPDKIAFSIVISNLSRKRRASEAQSFFDSL----KDRFEPDVIVYTNLVRGWCRAGEIS 272
Query: 265 KARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYD 303
+A K F M GIE + TY+ ++ ++S +D
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHD 311
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G+ K GD + AE +A M P VV+ TSLM Y G+ N A ++ M G
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
PS T+ +L + ++A ++F + + +KP++ +N+MI Y + G
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM---AEWNVKPNRVTYNVMIEGYCEEGDMS 559
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
KA + M E+GI T +Y L+
Sbjct: 560 KAFEFLKEMTEKGIVPDTYSYRPLI 584
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 3/158 (1%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ L+ G K+ +F +++ M + P+ + +SL+E K G+ A + +R+
Sbjct: 300 YCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVV 359
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
FG P+ Y ++ + +G KF EAE +F+ + K L+P+ ++++I M+ + G
Sbjct: 360 DFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM---GKIGLRPNDVTYSILIDMFCRRG 416
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVS 299
D A M + G++ S YNSL++ + ++S
Sbjct: 417 KLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDIS 454
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ G K G A ++ + G PN+ +L+++ KG +++ AE +F RM K G
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ VTY +++ F + K A ++D + LK +N +I + K G
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD---TGLKLSVYPYNSLINGHCKFGDIS 454
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
A A M + +E + VTY SLM
Sbjct: 455 AAEGFMAEMINKKLEPTVVTYTSLM 479
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 5/150 (3%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ +I K GDF A + LM G PN V+ T+++ K G N AE + +MQ
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744
Query: 202 KFGPEPSAVTYQLILKTFVQGD-KFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKA 260
P+ VTY L +G+ ++A E+ +L L + +NM+I + +
Sbjct: 745 PVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL----KGLLANTATYNMLIRGFCRQ 800
Query: 261 GSYDKARKTFALMAERGIEQSTVTYNSLMS 290
G ++A + M G+ +TY ++++
Sbjct: 801 GRIEEASELITRMIGDGVSPDCITYTTMIN 830
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 106/222 (47%), Gaps = 9/222 (4%)
Query: 80 QIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLK-KWNLVIEILEWLRNQSWWDFG 138
ID A S + + K++ + + +I L +K + NL E+ + +
Sbjct: 236 DIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 295
Query: 139 KMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFR 198
+ I + YG+ D A ++L+ M + PNVV+ ++L++A+ K G+ AE ++
Sbjct: 296 SL--IRCLCNYGRWSD---ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 350
Query: 199 RMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYK 258
M K +P TY ++ F D+ EA+ +FE ++ + P+ +N +I +
Sbjct: 351 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD---CFPNVVTYNTLIKGFC 407
Query: 259 KAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSN 300
KA D+ + F M++RG+ +TVTY +L+ +E N
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDN 449
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 76/146 (52%), Gaps = 3/146 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G+ K + ++ M++ G N V+ T+L+ + + +NA+ +F++M G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P +TY ++L K + A VFE L ++S ++PD +N+MI KAG +
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYL---QRSKMEPDIYTYNIMIEGMCKAGKVE 518
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
F ++ +G++ + VTY ++MS
Sbjct: 519 DGWDLFCSLSLKGVKPNVVTYTTMMS 544
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 104/215 (48%), Gaps = 6/215 (2%)
Query: 87 AVSVLSDEKLKNQTIPKDLVIGTLVR-FKQLKKWNLVIEILEWLRNQSWWDFGKMDFIML 145
AV++ D +K++ P + L+ ++ K++LVI + E ++N + +L
Sbjct: 65 AVNLFGD-MVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGI-SHNLYTYSIL 122
Query: 146 ITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGP 205
I + + + A VLA M K GY P++V+ SL+ + G R ++A ++ +M + G
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 206 EPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDK 265
+P + T+ ++ + ++ EA + + ++ +PD + +++ K G D
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMV---VKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 266 ARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSN 300
A M + IE V YN+++ NYK V++
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND 274
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
+++ G K GD + A +L M + P VV ++++A N+A +F M
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
G P+ VTY +++ ++ +A + +++ + + P+ F+ +I + K G
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK---INPNVVTFSALIDAFVKEGKL 342
Query: 264 DKARKTFALMAERGIEQSTVTYNSLMS 290
+A K + M +R I+ TY+SL++
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLIN 369
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 98/219 (44%), Gaps = 11/219 (5%)
Query: 73 NWWKLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQ 132
N + + +++D+A ++ + P + TL+ K K V E +E R
Sbjct: 369 NGFCMHDRLDEAKHMFELM----ISKDCFPNVVTYNTLI--KGFCKAKRVDEGMELFREM 422
Query: 133 SWWDF--GKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRY 190
S + + LI G+ + + + A+ V M +G P++++ + L++ G+
Sbjct: 423 SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKV 482
Query: 191 NNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMF 250
A +F +Q+ EP TY ++++ + K ++ ++F +L +KP+ +
Sbjct: 483 ETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL---SLKGVKPNVVTY 539
Query: 251 NMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
M+ + + G ++A F M E G + TYN+L+
Sbjct: 540 TTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 3/157 (1%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F LI + K G AEK+ M K P++ + +SL+ + R + A+ +F M
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
P+ VTY ++K F + + E E+F + + L + + +I+ + +A
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM---SQRGLVGNTVTYTTLIHGFFQAR 445
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEV 298
D A+ F M G+ +TY+ L+ N +V
Sbjct: 446 ECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKV 482
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
++I G K G + ++ G PNVV+ T++M + + G A+A+FR M++
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
Query: 204 GPEPSAVTYQLILKTFVQ-GDKFKEAEEVFE 233
GP P + TY +++ ++ GDK AE + E
Sbjct: 566 GPLPDSGTYNTLIRAHLRDGDKAASAELIRE 596
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 3/159 (1%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ +I K G N A + M G P+VV TSL+ GR+ +A+++ R M
Sbjct: 180 YTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMT 239
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
K +P +T+ ++ FV+ KF +AEE++ ++ + + P+ + +I + G
Sbjct: 240 KRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI---RMSIAPNIFTYTSLINGFCMEG 296
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSN 300
D+AR+ F LM +G V Y SL++ K+V +
Sbjct: 297 CVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDD 335
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 77/152 (50%), Gaps = 9/152 (5%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKN---GYPPNVVSQTSLMEAYGKGGRYNNAEAIFR 198
F LI G+ LG N E+ ++++N+ G P+VV T+++++ K G N A ++F
Sbjct: 145 FTSLINGFC-LG--NRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFD 201
Query: 199 RMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYK 258
+M+ +G P V Y ++ ++++A+ + + K +KPD FN +I +
Sbjct: 202 QMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM---TKRKIKPDVITFNALIDAFV 258
Query: 259 KAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
K G + A + + M I + TY SL++
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 68/135 (50%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G+ K + A K+ M++ G N ++ T+L++ +G+ G+ N A+ +F M G
Sbjct: 323 LINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG 382
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ TY ++L K K+A +FE + E + P+ +N++++ G +
Sbjct: 383 VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLE 442
Query: 265 KARKTFALMAERGIE 279
KA F M +R ++
Sbjct: 443 KALMVFEDMRKREMD 457
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ LI G+G++G N A++V + M G PPN+ + L+ G+ A IF MQ
Sbjct: 355 YTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQ 414
Query: 202 KF---GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYK 258
K G P+ TY ++L K ++A VFE D K + + ++I
Sbjct: 415 KREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFE---DMRKREMDIGIITYTIIIQGMC 471
Query: 259 KAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
KAG A F + +G++ + VTY +++S
Sbjct: 472 KAGKVKNAVNLFCSLPSKGVKPNVVTYTTMIS 503
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 74/148 (50%), Gaps = 6/148 (4%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G+ G + A ++ LM G P+VV+ TSL+ + K + ++A IF M + G
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+ +TY +++ F Q K A+EVF ++ + P+ + +N++++ G
Sbjct: 348 LTGNTITYTTLIQGFGQVGKPNVAQEVFSHMV---SRGVPPNIRTYNVLLHCLCYNGKVK 404
Query: 265 KARKTFALMAER---GIEQSTVTYNSLM 289
KA F M +R G+ + TYN L+
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLL 432
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 158 AEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILK 217
A L M K G+ P++V+ TSL+ + G R A ++ +M + G +P V Y I+
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 218 TFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERG 277
+ + A +F+ + E ++PD M+ ++ +G + A M +R
Sbjct: 186 SLCKNGHVNYALSLFDQM---ENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRK 242
Query: 278 IEQSTVTYNSLMSF---ETNYKEVSNIYDQILK 307
I+ +T+N+L+ E + + +Y+++++
Sbjct: 243 IKPDVITFNALIDAFVKEGKFLDAEELYNEMIR 275
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F LI + K G F AE++ M + PN+ + TSL+ + G + A +F M+
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G P V Y ++ F + K +A ++F + + L + + +I + + G
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM---SQKGLTGNTITYTTLIQGFGQVG 366
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
+ A++ F+ M RG+ + TYN L+
Sbjct: 367 KPNVAQEVFSHMVSRGVPPNIRTYNVLL 394
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 3/155 (1%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+DF L+ K+ F+ + + G ++ + LM + + + A + +
Sbjct: 73 IDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGK 132
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M K G EP VT+ ++ F G++ +EA + +++ +KPD M+ +I K
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE---MGIKPDVVMYTTIIDSLCK 189
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLMSFETN 294
G + A F M GI V Y SL++ N
Sbjct: 190 NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCN 224
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 18/212 (8%)
Query: 85 GSAVSVLSDEKLKNQTIPKD------LVIGTLVRFKQLKKW-NLVIEILEWLRNQSWWDF 137
G A+ VL +++K Q I D L+IG L + K++ + + ++E++E + + +
Sbjct: 469 GDAMRVL--KEMKEQGIAPDIFCYNSLIIG-LSKAKRMDEARSFLVEMVENGLKPNAFTY 525
Query: 138 GKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIF 197
G I+GY + +F A+K + M + G PN V T L+ Y K G+ A + +
Sbjct: 526 GA-----FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY 580
Query: 198 RRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMY 257
R M G A TY +++ + DK +AEE+F + + PD + ++I +
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM---RGKGIAPDVFSYGVLINGF 637
Query: 258 KKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
K G+ KA F M E G+ + + YN L+
Sbjct: 638 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 68/147 (46%), Gaps = 4/147 (2%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
+LI G+ KLG+ A + M + G PNV+ L+ + + G A+ + M
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
G P+AVTY I+ + + EA +F+ + + L PD ++ ++ +
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM---KLKGLVPDSFVYTTLVDGCCRLNDV 748
Query: 264 DKARKTFALMAERGIEQSTVTYNSLMS 290
++A F ++G ST +N+L++
Sbjct: 749 ERAITIFG-TNKKGCASSTAPFNALIN 774
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ +L+ G K + AE++ M G P+V S L+ + K G A +IF M
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ G P+ + Y ++L F + + ++A+E+ + + L P+ + +I Y K+G
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM---SVKGLHPNAVTYCTIIDGYCKSG 711
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
+A + F M +G+ + Y +L+
Sbjct: 712 DLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 3/146 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI GY + + ++L M K + + ++++ G + A I + M G
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ V Y ++KTF+Q +F +A V + + ++ + PD +N +I KA D
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM---KEQGIAPDIFCYNSLIIGLSKAKRMD 504
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
+AR M E G++ + TY + +S
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFIS 530
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 115 QLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNV 174
++KK N+VI S + +G ++ G GD +GA ++ M +G PNV
Sbjct: 407 EMKKRNIVI---------SPYTYGT-----VVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452
Query: 175 VSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFET 234
V T+L++ + + R+ +A + + M++ G P Y ++ + + EA
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512
Query: 235 LLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
++++ LKP+ + I Y +A + A K M E G+ + V L++
Sbjct: 513 MVEN---GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 3/149 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ LI + + F A +VL M + G P++ SL+ K R + A + M
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV 514
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ G +P+A TY + +++ +F A++ + + + + P++ + +I Y K G
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEFASADKYVKEM---RECGVLPNKVLCTGLINEYCKKG 571
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMS 290
+A + M ++GI TY LM+
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMN 600
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 94/219 (42%), Gaps = 6/219 (2%)
Query: 73 NWWKLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQ 132
N + + + +A S + +E L I ++++G R +++K E+L+ + +
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK---ELLDEMSVK 691
Query: 133 SWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNN 192
+ + +I GY K GD A ++ M G P+ T+L++ +
Sbjct: 692 GLHP-NAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 750
Query: 193 AEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPL-KPDQKMFN 251
A IF +K G S + ++ + K + EV L+D KP+ +N
Sbjct: 751 AITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYN 809
Query: 252 MMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
+MI K G+ + A++ F M + + +TY SL++
Sbjct: 810 IMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
I + YG+ D A ++L+ M + PNVV+ ++L++A+ K G+ AE ++ M
Sbjct: 296 LIRCLCNYGRWSD---ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
K +P TY ++ F D+ EA+ +FE ++ + P+ +N +I + KA
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD---CFPNVVTYNTLIKGFCKAK 409
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
++ + F M++RG+ +TVTYN+L+
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLI 437
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 103/219 (47%), Gaps = 11/219 (5%)
Query: 73 NWWKLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQ 132
N + + +++D+A ++ + P + TL+ K K V E +E R
Sbjct: 368 NGFCMHDRLDEAKHMFELM----ISKDCFPNVVTYNTLI--KGFCKAKRVEEGMELFREM 421
Query: 133 SWWDF--GKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRY 190
S + + LI G + GD + A+K+ M +G PP++++ + L++ K G+
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481
Query: 191 NNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMF 250
A +F +QK EP TY ++++ + K ++ ++F +L +KP+ ++
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL---SLKGVKPNVIIY 538
Query: 251 NMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
MI + + G ++A F M E G ++ TYN+L+
Sbjct: 539 TTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 75/146 (51%), Gaps = 3/146 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G+ K ++ M++ G N V+ +L++ + G + A+ IF++M G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P +TY ++L + K ++A VFE L +KS ++PD +N+MI KAG +
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYL---QKSKMEPDIYTYNIMIEGMCKAGKVE 517
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
F ++ +G++ + + Y +++S
Sbjct: 518 DGWDLFCSLSLKGVKPNVIIYTTMIS 543
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 121/267 (45%), Gaps = 18/267 (6%)
Query: 44 KGMLTPRKFMQRRRKNTVFK------DAA--DEAEKKNWWKLME-QIDQAGSAVSVLSDE 94
K M ++F Q R+ + +F AA D EK + L++ ++D A L E
Sbjct: 15 KKMSLAKRFAQLRKASPLFSLRGVYFSAASYDYREKLSRNVLLDLKLDDAVD----LFGE 70
Query: 95 KLKNQTIPKDLVIGTLVR-FKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLG 153
++++ +P + L+ ++ K++LVI + E ++N + + +LI + +
Sbjct: 71 MVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRI-SYDLYSYNILINCFCRRS 129
Query: 154 DFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQ 213
A VL M K GY P++V+ +SL+ Y G R + A A+ +M +P+ VT+
Sbjct: 130 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFN 189
Query: 214 LILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALM 273
++ +K EA + + ++ +PD + ++ K G D A M
Sbjct: 190 TLIHGLFLHNKASEAVALIDRMV---ARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
Query: 274 AERGIEQSTVTYNSLMSFETNYKEVSN 300
+ IE V Y +++ NYK V++
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVND 273
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ +I + N A + M+ G PNVV+ SL+ GR+++A + M
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ P+ VT+ ++ FV+ K EAE++++ ++ K + PD ++ +I +
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI---KRSIDPDIFTYSSLINGFCMHD 374
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
D+A+ F LM + + VTYN+L+
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLI 402
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 3/154 (1%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F LI + K G AEK+ M K P++ + +SL+ + R + A+ +F M
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
P+ VTY ++K F + + +E E+F + + L + +N +I +AG
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM---SQRGLVGNTVTYNTLIQGLFQAG 444
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETNY 295
D A+K F M G+ +TY+ L+ Y
Sbjct: 445 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
++ G K GD + A +L M K +VV T++++A N+A +F M G
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ VTY +++ ++ +A + +++ + + P+ F+ +I + K G
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK---INPNVVTFSALIDAFVKEGKLV 342
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
+A K + M +R I+ TY+SL++
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLIN 368
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 74/146 (50%), Gaps = 10/146 (6%)
Query: 94 EKLKNQTIPKDLV-----IGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITG 148
+K+ + +P D++ + L ++ +L+K +V E L+ +S + + ++I G
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ----KSKMEPDIYTYNIMIEG 509
Query: 149 YGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPS 208
K G + ++ G PNV+ T+++ + + G A+A+FR M++ G P+
Sbjct: 510 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 569
Query: 209 AVTYQLILKTFVQ-GDKFKEAEEVFE 233
+ TY +++ ++ GDK AE + E
Sbjct: 570 SGTYNTLIRARLRDGDKAASAELIKE 595
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 12/170 (7%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F +LI G+ K + G+ KV M PNV+S SL+ GG+ + A ++ +M
Sbjct: 299 FNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMV 358
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G +P+ +TY ++ F + D KEA ++F ++ + P +M+NM+I Y K G
Sbjct: 359 SAGVQPNLITYNALINGFCKNDMLKEALDMFGSV---KGQGAVPTTRMYNMLIDAYCKLG 415
Query: 262 SYDKARKTFAL---MAERGIEQSTVTYNSLMSF---ETNYKEVSNIYDQI 305
D FAL M GI TYN L++ N + ++DQ+
Sbjct: 416 KIDDG---FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL 462
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 6/152 (3%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAY---GKGGRYNNAEAIFR 198
F ++I K G N A V+ M G PNVVS +L++ Y G G+ A+A+ +
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLK 285
Query: 199 RMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYK 258
M + P+ T+ +++ F + D + +VF+ +LD + +KP+ +N +I
Sbjct: 286 EMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQD---VKPNVISYNSLINGLC 342
Query: 259 KAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
G +A M G++ + +TYN+L++
Sbjct: 343 NGGKISEAISMRDKMVSAGVQPNLITYNALIN 374
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 70/141 (49%), Gaps = 3/141 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G + G+ A+K+ + G P ++V+ LME Y + G A + + M K G
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMG 500
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+P +TY +++K + + K A + T ++ E+ L+ + +N+++ Y + G +
Sbjct: 501 LKPRHLTYNIVMKGYCKEGNLKAATNM-RTQMEKERR-LRMNVASYNVLLQGYSQKGKLE 558
Query: 265 KARKTFALMAERGIEQSTVTY 285
A M E+G+ + +TY
Sbjct: 559 DANMLLNEMLEKGLVPNRITY 579
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 69/131 (52%), Gaps = 6/131 (4%)
Query: 172 PNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQ---GDKFKEA 228
PNV + ++ A K G+ N A + M+ +G P+ V+Y ++ + + K +A
Sbjct: 221 PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKA 280
Query: 229 EEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSL 288
+ V + +++++ S P+ FN++I + K + + K F M ++ ++ + ++YNSL
Sbjct: 281 DAVLKEMVENDVS---PNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSL 337
Query: 289 MSFETNYKEVS 299
++ N ++S
Sbjct: 338 INGLCNGGKIS 348
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 7/166 (4%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G+ K A + + G P L++AY K G+ ++ A+ M++ G
Sbjct: 372 LINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG 431
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P TY ++ + + A+++F+ L S PD F++++ Y + G
Sbjct: 432 IVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL----TSKGLPDLVTFHILMEGYCRKGESR 487
Query: 265 KARKTFALMAERGIEQSTVTYNSLM---SFETNYKEVSNIYDQILK 307
KA M++ G++ +TYN +M E N K +N+ Q+ K
Sbjct: 488 KAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEK 533
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 78/148 (52%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F I + K G A K+ + M + G PNVV+ ++++ G GRY+ A +M
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 322
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ G EP+ +TY +++K + + +A V + + K P+ ++N +I + +AG
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEM---TKKGFPPNVIVYNNLIDSFIEAG 379
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
S +KA + LM +G+ ++ TYN+L+
Sbjct: 380 SLNKAIEIKDLMVSKGLSLTSSTYNTLI 407
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 5/177 (2%)
Query: 93 DEKLKNQTIPKDLVIGTLVR-FKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGK 151
DE + P +V L+R + + + ++ +E+ E ++++ + LI G
Sbjct: 634 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP-NSATYTSLIKGMSI 692
Query: 152 LGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVT 211
+ A+ + M G PNV T+L++ YGK G+ E + R M P+ +T
Sbjct: 693 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 752
Query: 212 YQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARK 268
Y +++ + + EA + + + + PD + IY Y K G +A K
Sbjct: 753 YTVMIGGYARDGNVTEASRLLNEM---REKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 5/142 (3%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI Y + G + A ++ M G PN + TSL++ R A+ +F M+ G
Sbjct: 651 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 710
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSP-LKPDQKMFNMMIYMYKKAGSY 263
EP+ Y ++ + K + +V E LL + S + P++ + +MI Y + G+
Sbjct: 711 LEPNVFHYTALIDGY---GKLGQMVKV-ECLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Query: 264 DKARKTFALMAERGIEQSTVTY 285
+A + M E+GI ++TY
Sbjct: 767 TEASRLLNEMREKGIVPDSITY 788
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 78/148 (52%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F I + K G A K+ + M + G PNVV+ ++++ G GRY+ A +M
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 322
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ G EP+ +TY +++K + + +A V + + K P+ ++N +I + +AG
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEM---TKKGFPPNVIVYNNLIDSFIEAG 379
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
S +KA + LM +G+ ++ TYN+L+
Sbjct: 380 SLNKAIEIKDLMVSKGLSLTSSTYNTLI 407
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 5/177 (2%)
Query: 93 DEKLKNQTIPKDLVIGTLVR-FKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGK 151
DE + P +V L+R + + + ++ +E+ E ++++ + LI G
Sbjct: 634 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP-NSATYTSLIKGMSI 692
Query: 152 LGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVT 211
+ A+ + M G PNV T+L++ YGK G+ E + R M P+ +T
Sbjct: 693 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 752
Query: 212 YQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARK 268
Y +++ + + EA + + + + PD + IY Y K G +A K
Sbjct: 753 YTVMIGGYARDGNVTEASRLLNEM---REKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 5/142 (3%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI Y + G + A ++ M G PN + TSL++ R A+ +F M+ G
Sbjct: 651 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 710
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSP-LKPDQKMFNMMIYMYKKAGSY 263
EP+ Y ++ + K + +V E LL + S + P++ + +MI Y + G+
Sbjct: 711 LEPNVFHYTALIDGY---GKLGQMVKV-ECLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Query: 264 DKARKTFALMAERGIEQSTVTY 285
+A + M E+GI ++TY
Sbjct: 767 TEASRLLNEMREKGIVPDSITY 788
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI+G G ++ A ++++ M K P+V + +L++A K GR + AE + M +
Sbjct: 227 LISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRS 286
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+P VTY L++ + EAEE+F ++ PD ++++I Y K+ +
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV---SKGCFPDVVTYSILINGYCKSKKVE 343
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
K F M++RG+ ++TVTY L+
Sbjct: 344 HGMKLFCEMSQRGVVRNTVTYTILI 368
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ +LI GY K K+ M++ G N V+ T L++ Y + G+ N AE IFRRM
Sbjct: 329 YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G P+ +TY ++L K ++A + L D +K+ + D +N++I KAG
Sbjct: 389 FCGVHPNIITYNVLLHGLCDNGKIEKALVI---LADMQKNGMDADIVTYNIIIRGMCKAG 445
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
A + + +G+ TY ++M
Sbjct: 446 EVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 3/156 (1%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
+I G K + A +L M K+G P+VV+ SL+ GR+++A + M K
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P T+ ++ V+ + EAEE +E ++ + L PD ++++IY D
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMI---RRSLDPDIVTYSLLIYGLCMYSRLD 308
Query: 265 KARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSN 300
+A + F M +G VTY+ L++ K+V +
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 78/162 (48%), Gaps = 3/162 (1%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ +LI G + AE++ M G P+VV+ + L+ Y K + + +F M
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ G + VTY ++++ + + K AEE+F ++ + P+ +N++++ G
Sbjct: 354 QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV---FCGVHPNIITYNVLLHGLCDNG 410
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYD 303
+KA A M + G++ VTYN ++ EV++ +D
Sbjct: 411 KIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWD 452
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 3/150 (2%)
Query: 141 DFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRM 200
DF L++ K+ ++ + M G P N+ + L+ + + + + A + +M
Sbjct: 83 DFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKM 142
Query: 201 QKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKA 260
K G EPS VT+ +L F +GD+ +A +F+ ++ KP+ ++N +I K+
Sbjct: 143 IKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMV---GMGYKPNVVIYNTIIDGLCKS 199
Query: 261 GSYDKARKTFALMAERGIEQSTVTYNSLMS 290
D A M + GI VTYNSL+S
Sbjct: 200 KQVDNALDLLNRMEKDGIGPDVVTYNSLIS 229
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 169 GYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEA 228
GY PNVV ++++ K + +NA + RM+K G P VTY ++ ++ +A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 229 EEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSL 288
+ + K + PD FN +I K G +A + + M R ++ VTY+ L
Sbjct: 241 TRMVSCM---TKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 289 M 289
+
Sbjct: 298 I 298
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 67/148 (45%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F LI K G + AE+ M + P++V+ + L+ R + AE +F M
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G P VTY +++ + + K + ++F + + + + + ++I Y +AG
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM---SQRGVVRNTVTYTILIQGYCRAG 375
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
+ A + F M G+ + +TYN L+
Sbjct: 376 KLNVAEEIFRRMVFCGVHPNIITYNVLL 403
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 107/206 (51%), Gaps = 8/206 (3%)
Query: 86 SAVSVLSDEKLKNQTIPKDLVI-GTLVRF-KQLKKWNLVIEILEWLRNQSWWDFGKMDFI 143
SA+S L +K++ + DLV+ L+ ++L ++ I I L+ +S + +
Sbjct: 208 SALSWL--QKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLK-RSGITPDLVAYN 264
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
+I YGK F A ++ MN+ G PN VS ++L+ Y + ++ A ++F M++
Sbjct: 265 SMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEV 324
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
T +++ + Q D KEA+ +F +L K ++P+ +N ++ +Y +A +
Sbjct: 325 NCALDLTTCNIMIDVYGQLDMVKEADRLFWSL---RKMDIEPNVVSYNTILRVYGEAELF 381
Query: 264 DKARKTFALMAERGIEQSTVTYNSLM 289
+A F LM + IEQ+ VTYN+++
Sbjct: 382 GEAIHLFRLMQRKDIEQNVVTYNTMI 407
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 107/224 (47%), Gaps = 14/224 (6%)
Query: 73 NWWKLMEQIDQAGSAVSVLSDEKLKNQTIPKDLV-----IGTLVRFKQLKKWNLVIEILE 127
N +L ++ A+S+ S +LK I DLV I + K ++ L+I+ +
Sbjct: 230 NLIELSRRLCDYSKAISIFS--RLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEM- 286
Query: 128 WLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKG 187
N++ + + L++ Y + F A V A M + ++ + +++ YG+
Sbjct: 287 ---NEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQL 343
Query: 188 GRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQ 247
A+ +F ++K EP+ V+Y IL+ + + + F EA +F + ++ ++ +
Sbjct: 344 DMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLM---QRKDIEQNV 400
Query: 248 KMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSF 291
+N MI +Y K ++KA M RGIE + +TY++++S
Sbjct: 401 VTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISI 444
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 100/213 (46%), Gaps = 17/213 (7%)
Query: 77 LMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWD 136
L++++++AG + +S L + + + L F ++K+ N +++
Sbjct: 282 LIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTC-------- 333
Query: 137 FGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAI 196
++I YG+L A+++ + K PNVVS +++ YG+ + A +
Sbjct: 334 ------NIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHL 387
Query: 197 FRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYM 256
FR MQ+ E + VTY ++K + K E E+ + + + ++P+ ++ +I +
Sbjct: 388 FRLMQRKDIEQNVVTYNTMIKIY---GKTMEHEKATNLVQEMQSRGIEPNAITYSTIISI 444
Query: 257 YKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+ KAG D+A F + G+E V Y +++
Sbjct: 445 WGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMI 477
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 87/172 (50%), Gaps = 3/172 (1%)
Query: 119 WNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQT 178
W + +L+W+ ++ + + +++ + F+ A + M + P+ + +
Sbjct: 135 WQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYS 194
Query: 179 SLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDD 238
+L+ ++GK G +++A + ++M++ V Y +++ + + +A +F L
Sbjct: 195 TLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRL--- 251
Query: 239 EKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
++S + PD +N MI +Y KA + +AR M E G+ +TV+Y++L+S
Sbjct: 252 KRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLS 303
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 16/204 (7%)
Query: 79 EQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFG 138
E++ G A +L + KL + IP++ I L + + ++ W+ Q++
Sbjct: 481 ERVGLMGHAKRLLHELKLPD-NIPRETAITILAKAGRTEEAT-------WVFRQAFESGE 532
Query: 139 KMD---FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEA 195
D F +I Y + + +V M GY P+ ++ AYGK + A+
Sbjct: 533 VKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADT 592
Query: 196 IFRRMQKFGPE-PSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMI 254
++R MQ+ G P V +Q+ L + F+ E +F+ L E P +++ ++
Sbjct: 593 VYREMQEEGCVFPDEVHFQM-LSLYSSKKDFEMVESLFQRL---ESDPNVNSKELHLVVA 648
Query: 255 YMYKKAGSYDKARKTFALMAERGI 278
+Y++A + A + M ERGI
Sbjct: 649 ALYERADKLNDASRVMNRMRERGI 672
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 110/231 (47%), Gaps = 17/231 (7%)
Query: 59 NTVFKDAADEAEKKNWWKLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKK 118
N V + K+ +++ +++ + G + ++++ L IG L R +L +
Sbjct: 272 NCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTL----------IGGLCREMKLNE 321
Query: 119 WNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQT 178
N V++ ++ + + + LI G+ +G A + + G P++V+
Sbjct: 322 ANKVVDQMK----SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYN 377
Query: 179 SLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDD 238
L+ + + G + A + + M++ G +PS VTY +++ TF + D ++A + L
Sbjct: 378 ILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKA---IQLRLSM 434
Query: 239 EKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
E+ L PD ++++I+ + G ++A + F M E+ E + V YN+++
Sbjct: 435 EELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMI 485
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 16/185 (8%)
Query: 134 WWDFGKMD----------FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEA 183
WW F + F +LI G + G+ + +L + + G+ PNVV T+L++
Sbjct: 148 WWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDG 207
Query: 184 YGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPL 243
K G A+ +F M K G + TY +++ + K+ E++E + +D +
Sbjct: 208 CCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQED---GV 264
Query: 244 KPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSL---MSFETNYKEVSN 300
P+ +N ++ K G A + F M ERG+ + VTYN+L + E E +
Sbjct: 265 FPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANK 324
Query: 301 IYDQI 305
+ DQ+
Sbjct: 325 VVDQM 329
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 10/164 (6%)
Query: 134 WWDFGKMDFI-------MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGK 186
+++ GK+ + +LI G K G ++ M ++G PN+ + +M K
Sbjct: 221 FFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCK 280
Query: 187 GGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPD 246
GR +A +F M++ G + VTY ++ + K EA +V + + D + P+
Sbjct: 281 DGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD---GINPN 337
Query: 247 QKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
+N +I + G KA + RG+ S VTYN L+S
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVS 381
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 77/146 (52%), Gaps = 3/146 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G+ K ++ M++ G N V+ T+L+ + + +NA+ +F++M G
Sbjct: 404 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 463
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ +TY ++L + K +A VFE L ++S ++PD +N+MI KAG +
Sbjct: 464 VHPNILTYNILLDGLCKNGKLAKAMVVFEYL---QRSTMEPDIYTYNIMIEGMCKAGKVE 520
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
+ F ++ +G+ + + YN+++S
Sbjct: 521 DGWELFCNLSLKGVSPNVIAYNTMIS 546
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 104/211 (49%), Gaps = 9/211 (4%)
Query: 80 QIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLK-KWNLVIEILEWLRNQSWWDFG 138
ID A S + + K++ + + +I L ++K + NL E+ + +
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYS 297
Query: 139 KMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFR 198
+ I + YG+ D A ++L+ M + PNVV+ ++L++A+ K G+ AE ++
Sbjct: 298 SL--ISCLCNYGRWSD---ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 199 RMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYK 258
M K +P TY ++ F D+ EA+ +FE ++ + P+ ++ +I +
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD---CFPNVVTYSTLIKGFC 409
Query: 259 KAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
KA ++ + F M++RG+ +TVTY +L+
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 97/219 (44%), Gaps = 11/219 (5%)
Query: 73 NWWKLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQ 132
N + + +++D+A ++ + P + TL+ K K V E +E R
Sbjct: 371 NGFCMHDRLDEAKHMFELM----ISKDCFPNVVTYSTLI--KGFCKAKRVEEGMELFREM 424
Query: 133 SWWDF--GKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRY 190
S + + LI G+ + D + A+ V M G PN+++ L++ K G+
Sbjct: 425 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 484
Query: 191 NNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMF 250
A +F +Q+ EP TY ++++ + K ++ E+F L + P+ +
Sbjct: 485 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL---SLKGVSPNVIAY 541
Query: 251 NMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
N MI + + GS ++A M E G ++ TYN+L+
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 99/224 (44%), Gaps = 6/224 (2%)
Query: 78 MEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVR-FKQLKKWNLVIEILEWLRNQSWWD 136
+ I + AV + D +K++ P + L+ ++ K+ LVI + E ++
Sbjct: 58 LSDIIKVDDAVDLFGD-MVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI-S 115
Query: 137 FGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAI 196
+ + I + + + A VLA M K GY P++V+ +SL+ Y R ++A A+
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 197 FRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYM 256
+M + G +P T+ ++ +K EA + + ++ + +PD + ++
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV---QRGCQPDLVTYGTVVNG 232
Query: 257 YKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSN 300
K G D A M + IE V YN+++ YK + +
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDD 276
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 74/145 (51%), Gaps = 1/145 (0%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G G++ A +V M NG P++V+ ++ AY G +Y+ A + F M+
Sbjct: 219 LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK 278
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P T+ +I+ + + +A ++F + + ++++ +PD F ++++Y G +
Sbjct: 279 VRPDTTTFNIIIYCLSKLGQSSQALDLFNS-MREKRAECRPDVVTFTSIMHLYSVKGEIE 337
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
R F M G++ + V+YN+LM
Sbjct: 338 NCRAVFEAMVAEGLKPNIVSYNALM 362
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 6/232 (2%)
Query: 75 WKLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSW 134
+K Q +A S ++ K++ T +++I L + Q + + + R +
Sbjct: 258 YKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECR 317
Query: 135 WDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAE 194
D IM + Y G+ V M G PN+VS +LM AY G A
Sbjct: 318 PDVVTFTSIMHL--YSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTAL 375
Query: 195 AIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMI 254
++ +++ G P V+Y +L ++ + + +A+EVF + + + KP+ +N +I
Sbjct: 376 SVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR---KPNVVTYNALI 432
Query: 255 YMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYDQIL 306
Y G +A + F M + GI+ + V+ +L++ + K+ N+ D +L
Sbjct: 433 DAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNV-DTVL 483
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 3/154 (1%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ Y G A VL + +NG P+VVS T L+ +YG+ + A+ +F M+K
Sbjct: 361 LMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKER 420
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+P+ VTY ++ + EA E+F + E+ +KP+ ++ ++
Sbjct: 421 RKPNVVTYNALIDAYGSNGFLAEAVEIFRQM---EQDGIKPNVVSVCTLLAACSRSKKKV 477
Query: 265 KARKTFALMAERGIEQSTVTYNSLMSFETNYKEV 298
+ RGI +T YNS + N E+
Sbjct: 478 NVDTVLSAAQSRGINLNTAAYNSAIGSYINAAEL 511
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+ + L+ YG+ A++V +M K PNVV+ +L++AYG G A IFR+
Sbjct: 391 VSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQ 450
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M++ G +P+ V+ +L + K + V + + + +N I Y
Sbjct: 451 MEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAA---QSRGINLNTAAYNSAIGSYIN 507
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
A +KA + M ++ ++ +VT+ L+S
Sbjct: 508 AAELEKAIALYQSMRKKKVKADSVTFTILIS 538
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 3/164 (1%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F +LI+G ++ + A L M P +S++ AY K G+ AE+IF +M+
Sbjct: 533 FTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMK 592
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G EP + Y +L + +K+ +A E+F L+ E + ++PD + ++ + K G
Sbjct: 593 MAGCEPDVIAYTSMLHAYNASEKWGKACELF---LEMEANGIEPDSIACSALMRAFNKGG 649
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYDQI 305
LM E+ I + + + S +E D I
Sbjct: 650 QPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLI 693
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 75/169 (44%), Gaps = 3/169 (1%)
Query: 121 LVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSL 180
L + + +W++ Q + + M+I + + + A + M K P+ + +L
Sbjct: 125 LCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDAL 184
Query: 181 MEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEK 240
+ A+G+ G++ A + M + PS TY ++ ++EA EV + + D+
Sbjct: 185 INAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDN-- 242
Query: 241 SPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+ PD N+++ YK Y KA F LM + T T+N ++
Sbjct: 243 -GVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIII 290
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 70/177 (39%), Gaps = 32/177 (18%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
++ Y K G AE + M G P+V++ TS++ AY ++ A +F M+ G
Sbjct: 571 VLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANG 630
Query: 205 PEPSAVTYQLILKTFVQG----------DKFKEAE---------EVFETL---------- 235
EP ++ +++ F +G D +E E E+F
Sbjct: 631 IEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAI 690
Query: 236 -LDDEKSPLKPDQK--MFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
L P P + N M++++ K+G + K F + G+ + TY L+
Sbjct: 691 DLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILL 747
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 74/145 (51%), Gaps = 1/145 (0%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G G++ A +V M NG P++V+ ++ AY G +Y+ A + F M+
Sbjct: 87 LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK 146
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P T+ +I+ + + +A ++F + + ++++ +PD F ++++Y G +
Sbjct: 147 VRPDTTTFNIIIYCLSKLGQSSQALDLFNS-MREKRAECRPDVVTFTSIMHLYSVKGEIE 205
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
R F M G++ + V+YN+LM
Sbjct: 206 NCRAVFEAMVAEGLKPNIVSYNALM 230
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 6/232 (2%)
Query: 75 WKLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSW 134
+K Q +A S ++ K++ T +++I L + Q + + + R +
Sbjct: 126 YKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECR 185
Query: 135 WDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAE 194
D IM + Y G+ V M G PN+VS +LM AY G A
Sbjct: 186 PDVVTFTSIMHL--YSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTAL 243
Query: 195 AIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMI 254
++ +++ G P V+Y +L ++ + + +A+EVF + + + KP+ +N +I
Sbjct: 244 SVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR---KPNVVTYNALI 300
Query: 255 YMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYDQIL 306
Y G +A + F M + GI+ + V+ +L++ + K+ N+ D +L
Sbjct: 301 DAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNV-DTVL 351
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 3/154 (1%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ Y G A VL + +NG P+VVS T L+ +YG+ + A+ +F M+K
Sbjct: 229 LMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKER 288
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+P+ VTY ++ + EA E+F + E+ +KP+ ++ ++
Sbjct: 289 RKPNVVTYNALIDAYGSNGFLAEAVEIFRQM---EQDGIKPNVVSVCTLLAACSRSKKKV 345
Query: 265 KARKTFALMAERGIEQSTVTYNSLMSFETNYKEV 298
+ RGI +T YNS + N E+
Sbjct: 346 NVDTVLSAAQSRGINLNTAAYNSAIGSYINAAEL 379
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+ + L+ YG+ A++V +M K PNVV+ +L++AYG G A IFR+
Sbjct: 259 VSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQ 318
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M++ G +P+ V+ +L + K + V + + + +N I Y
Sbjct: 319 MEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAA---QSRGINLNTAAYNSAIGSYIN 375
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
A +KA + M ++ ++ +VT+ L+S
Sbjct: 376 AAELEKAIALYQSMRKKKVKADSVTFTILIS 406
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 94/220 (42%), Gaps = 7/220 (3%)
Query: 86 SAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIML 145
+ +S + T + IG+ + +L+K I + + +R + + F +L
Sbjct: 349 TVLSAAQSRGINLNTAAYNSAIGSYINAAELEK---AIALYQSMRKKKV-KADSVTFTIL 404
Query: 146 ITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGP 205
I+G ++ + A L M P +S++ AY K G+ AE+IF +M+ G
Sbjct: 405 ISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGC 464
Query: 206 EPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDK 265
EP + Y +L + +K+ +A E+F L+ E + ++PD + ++ + K G
Sbjct: 465 EPDVIAYTSMLHAYNASEKWGKACELF---LEMEANGIEPDSIACSALMRAFNKGGQPSN 521
Query: 266 ARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYDQI 305
LM E+ I + + + S +E D I
Sbjct: 522 VFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLI 561
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Query: 165 MNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDK 224
M K P+ + +L+ A+G+ G++ A + M + PS TY ++
Sbjct: 37 MQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGN 96
Query: 225 FKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVT 284
++EA EV + + D+ + PD N+++ YK Y KA F LM + T T
Sbjct: 97 WREALEVCKKMTDN---GVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTT 153
Query: 285 YNSLM 289
+N ++
Sbjct: 154 FNIII 158
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 70/177 (39%), Gaps = 32/177 (18%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
++ Y K G AE + M G P+V++ TS++ AY ++ A +F M+ G
Sbjct: 439 VLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANG 498
Query: 205 PEPSAVTYQLILKTFVQG----------DKFKEAE---------EVFETL---------- 235
EP ++ +++ F +G D +E E E+F
Sbjct: 499 IEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAI 558
Query: 236 -LDDEKSPLKPDQK--MFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
L P P + N M++++ K+G + K F + G+ + TY L+
Sbjct: 559 DLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILL 615
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 3/146 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
+I G K+G N A ++ M ++G + V+ SL+ GR+++A + R M
Sbjct: 180 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 239
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ +T+ ++ FV+ KF EA +++E + + + PD +N +I G D
Sbjct: 240 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEM---TRRCVDPDVFTYNSLINGLCMHGRVD 296
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
+A++ LM +G VTYN+L++
Sbjct: 297 EAKQMLDLMVTKGCLPDVVTYNTLIN 322
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 72/146 (49%), Gaps = 3/146 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G+ + A +++ M + G+ P+VV ++++ K G N+A +F RM++ G
Sbjct: 145 LINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG 204
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
AVTY ++ ++ +A + ++ + P+ F +I ++ K G +
Sbjct: 205 VRADAVTYNSLVAGLCCSGRWSDAARLMRDMV---MRDIVPNVITFTAVIDVFVKEGKFS 261
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
+A K + M R ++ TYNSL++
Sbjct: 262 EAMKLYEEMTRRCVDPDVFTYNSLIN 287
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 6/159 (3%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G G + A+++L LM G P+VV+ +L+ + K R + +FR M + G
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+TY I++ + Q + A+E+F + +P+ + +++++Y +
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIF------SRMDSRPNIRTYSILLYGLCMNWRVE 398
Query: 265 KARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYD 303
KA F M + IE TYN ++ V + +D
Sbjct: 399 KALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWD 437
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 79/167 (47%), Gaps = 6/167 (3%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
++I + F A V+ M K GY P+VV+ +SL+ + +G R +A + +M++
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
G P V Y I+ + +A E+F+ + E+ ++ D +N ++ +G +
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRM---ERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 264 DKARKTFALMAERGIEQSTVTYNSLMSF---ETNYKEVSNIYDQILK 307
A + M R I + +T+ +++ E + E +Y+++ +
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTR 272
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+DF +++ K +++ + M G ++ S ++ + R+ A ++ +
Sbjct: 70 VDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGK 129
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M KFG EP VT ++ F QG++ +A ++ + E+ +PD ++N +I K
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM---EEMGFRPDVVIYNTIIDGSCK 186
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
G + A + F M G+ VTYNSL++
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVA 217
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 3/135 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F +I + K G F+ A K+ M + P+V + SL+ GR + A+ + M
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G P VTY ++ F + + E ++F + + L D +N +I Y +AG
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM---AQRGLVGDTITYNTIIQGYFQAG 363
Query: 262 SYDKARKTFALMAER 276
D A++ F+ M R
Sbjct: 364 RPDAAQEIFSRMDSR 378
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G+ K G +GA + M +G PNVV T+++EA + ++ AE++ M K
Sbjct: 393 LINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKEN 452
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
PS T+ +K + AE+VF + + P P+ +N ++ KA +
Sbjct: 453 CAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP--PNIVTYNELLDGLAKANRIE 510
Query: 265 KARKTFALMAERGIEQSTVTYNSLMSFETN 294
+A + RG+E S+ TYN+L+ N
Sbjct: 511 EAYGLTREIFMRGVEWSSSTYNTLLHGSCN 540
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 14/191 (7%)
Query: 103 KDLVIGTLVR---FKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAE 159
LV G +R F L WN +I N ++ L+ G+ G+ A
Sbjct: 320 SSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYN-------TLVQGFCSHGNIVKAV 372
Query: 160 KVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTF 219
V + M + G PN+ + SL+ + K G + A I+ +M G P+ V Y +++
Sbjct: 373 SVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEAL 432
Query: 220 VQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERG-I 278
+ KFKEAE + E + + +P P FN I AG D A K F M ++
Sbjct: 433 CRHSKFKEAESLIEIMSKENCAPSVPT---FNAFIKGLCDAGRLDWAEKVFRQMEQQHRC 489
Query: 279 EQSTVTYNSLM 289
+ VTYN L+
Sbjct: 490 PPNIVTYNELL 500
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 4/147 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G K D+ GA +++ M + G PNV+S ++L+ G+ A + +M K G
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG 311
Query: 205 PEPSAVTYQLILK-TFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
P+ T ++K F++G F +A +++ ++ L+P+ +N ++ + G+
Sbjct: 312 CHPNIYTLSSLVKGCFLRGTTF-DALDLWNQMI--RGFGLQPNVVAYNTLVQGFCSHGNI 368
Query: 264 DKARKTFALMAERGIEQSTVTYNSLMS 290
KA F+ M E G + TY SL++
Sbjct: 369 VKAVSVFSHMEEIGCSPNIRTYGSLIN 395
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 63/134 (47%), Gaps = 8/134 (5%)
Query: 165 MNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDK 224
M ++G+ PNV + L++A K + + A+ + M G P AV+Y ++ + +
Sbjct: 172 MKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGL 231
Query: 225 FKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVT 284
KE E+ E +P ++N +I K Y A + M E+GI + ++
Sbjct: 232 VKEGRELAER--------FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVIS 283
Query: 285 YNSLMSFETNYKEV 298
Y++L++ N ++
Sbjct: 284 YSTLINVLCNSGQI 297
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 79/179 (44%), Gaps = 3/179 (1%)
Query: 112 RFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYP 171
R +Q L + + + N + + + F ++I G + + +L M G+
Sbjct: 49 RLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFH 108
Query: 172 PNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEV 231
+ S++ Y + G A +F R+++FG +PS Y +L T + ++ + V
Sbjct: 109 CSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMV 168
Query: 232 FETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
+ D ++ +P+ +N+++ K D A+K M+ +G V+Y +++S
Sbjct: 169 YR---DMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVIS 224
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 4/134 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALM-NKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRM 200
F I G G + AEKV M ++ PPN+V+ L++ K R A + R +
Sbjct: 460 FNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREI 519
Query: 201 QKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKA 260
G E S+ TY +L A ++ ++ D KSP D+ NM+I Y K
Sbjct: 520 FMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSP---DEITMNMIILAYCKQ 576
Query: 261 GSYDKARKTFALMA 274
G ++A + L++
Sbjct: 577 GKAERAAQMLDLVS 590
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 98/202 (48%), Gaps = 7/202 (3%)
Query: 91 LSDEKLKNQTIPKDLVIGTLVR-FKQLKKWNLVIEILEWLRNQSWWDFGKMD-FIMLITG 148
L D+ +K P +L+ F + + ++ E++ ++ F +D + LI G
Sbjct: 277 LHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC--FPDLDTYNTLIKG 334
Query: 149 YGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPS 208
+ K ++ M+ G + V+ T+L++ G +NA+ +F++M G P
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394
Query: 209 AVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARK 268
+TY ++L K ++A EVF+ + +KS +K D ++ MI KAG D
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYM---QKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 451
Query: 269 TFALMAERGIEQSTVTYNSLMS 290
F ++ +G++ + VTYN+++S
Sbjct: 452 LFCSLSLKGVKPNVVTYNTMIS 473
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 76/148 (51%), Gaps = 6/148 (4%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
I + YG+ D A ++L+ M + PN+V+ +L++A+ K G++ AE + M
Sbjct: 226 LISCLCSYGRWSD---ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI 282
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
K +P TY ++ F D+ +A+++FE ++ + PD +N +I + K+
Sbjct: 283 KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD---CFPDLDTYNTLIKGFCKSK 339
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
+ + F M+ RG+ TVTY +L+
Sbjct: 340 RVEDGTELFREMSHRGLVGDTVTYTTLI 367
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
Query: 165 MNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDK 224
M G PNVV+ +SL+ GR+++A + M + P+ VT+ ++ FV+ K
Sbjct: 211 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 270
Query: 225 FKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVT 284
F EAE++ + ++ K + PD +N +I + DKA++ F M + T
Sbjct: 271 FVEAEKLHDDMI---KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDT 327
Query: 285 YNSLM 289
YN+L+
Sbjct: 328 YNTLI 332
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 91/195 (46%), Gaps = 12/195 (6%)
Query: 110 LVRFKQLKKWNLVIEILEWLR----NQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALM 165
L ++KK++LVI + E ++ + + + + +LI + + + A +L M
Sbjct: 17 LSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN-----ILINCFCRRSQISLALALLGKM 71
Query: 166 NKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKF 225
K GY P++V+ +SL+ Y G R ++A A+ +M + G P +T+ ++ +K
Sbjct: 72 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 131
Query: 226 KEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTY 285
EA + + ++ + +P+ + +++ K G D A M IE V +
Sbjct: 132 SEAVALVDRMV---QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 188
Query: 286 NSLMSFETNYKEVSN 300
N+++ Y+ V +
Sbjct: 189 NTIIDSLCKYRHVDD 203
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 3/153 (1%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F LI + K G F AEK+ M K P++ + SL+ + R + A+ +F M
Sbjct: 258 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 317
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
P TY ++K F + + ++ E+F + L D + +I G
Sbjct: 318 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM---SHRGLVGDTVTYTTLIQGLFHDG 374
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETN 294
D A+K F M G+ +TY+ L+ N
Sbjct: 375 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 407
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
I + YG+ D A ++L+ M + PN+V+ ++L++A+ K G+ AE ++ M
Sbjct: 294 LISCLCNYGRWSD---ASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMI 350
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
K +P+ TY ++ F D+ EA+++ E ++ + P+ +N +I + KA
Sbjct: 351 KRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMI---RKDCLPNVVTYNTLINGFCKAK 407
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
DK + F M++RG+ +TVTY +L+
Sbjct: 408 RVDKGMELFREMSQRGLVGNTVTYTTLI 435
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 82/172 (47%), Gaps = 5/172 (2%)
Query: 91 LSDEKLKNQTIPKDLVIGTLVR-FKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGY 149
L +E +K P +L+ F L + ++LE + + + + LI G+
Sbjct: 345 LYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLP-NVVTYNTLINGF 403
Query: 150 GKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSA 209
K + ++ M++ G N V+ T+L+ + + +NA+ +F++M G P+
Sbjct: 404 CKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 463
Query: 210 VTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+TY ++L + K +A VFE L ++S ++PD +N+MI KAG
Sbjct: 464 LTYNILLDGLCKNGKLAKAMVVFEYL---QRSTMEPDIYTYNIMIEGMCKAG 512
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G+ L A+++L LM + PNVV+ +L+ + K R + +FR M + G
Sbjct: 364 LINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRG 423
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+ VTY ++ F Q A+ VF+ ++ + P+ +N+++ K G
Sbjct: 424 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV---SVGVHPNILTYNILLDGLCKNGKLA 480
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
KA F + +E TYN ++
Sbjct: 481 KAMVVFEYLQRSTMEPDIYTYNIMI 505
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 3/133 (2%)
Query: 165 MNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDK 224
M K GY P++V+ SL+ + G R ++A A+ +M + G +P VT+ ++ +K
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198
Query: 225 FKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVT 284
EA + + ++ + +PD + ++ K G D A M IE + V
Sbjct: 199 ASEAVALIDRMV---QRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 285 YNSLMSFETNYKE 297
Y++++ Y+
Sbjct: 256 YSTVIDSLCKYRH 268
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 72/146 (49%), Gaps = 3/146 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
++ G K GD + A +L M NVV ++++++ K ++A +F M+ G
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ +TY ++ ++ +A + +++ + + P+ F+ +I + K G
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK---INPNLVTFSALIDAFVKKGKLV 340
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
KA K + M +R I+ + TY+SL++
Sbjct: 341 KAEKLYEEMIKRSIDPNIFTYSSLIN 366
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F LI + K G AEK+ M K PN+ + +SL+ + R A+ + M
Sbjct: 326 FSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMI 385
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ P+ VTY ++ F + + + E+F + + L + + +I+ + +A
Sbjct: 386 RKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM---SQRGLVGNTVTYTTLIHGFFQAR 442
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
D A+ F M G+ + +TYN L+
Sbjct: 443 DCDNAQMVFKQMVSVGVHPNILTYNILL 470
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 3/151 (1%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ G+ + A ++ M + GY P+ V+ T+L+ + + A A+ RM + G
Sbjct: 154 LLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRG 213
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+P VTY ++ K + + L E + ++ + +++ +I K D
Sbjct: 214 CQPDLVTYGAVVNGLC---KRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 270
Query: 265 KARKTFALMAERGIEQSTVTYNSLMSFETNY 295
A F M +G+ + +TY+SL+S NY
Sbjct: 271 DALNLFTEMENKGVRPNVITYSSLISCLCNY 301
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 98/202 (48%), Gaps = 10/202 (4%)
Query: 109 TLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIM-LITGYGKLGDFNGAEKVLALMNK 167
T+ R KK+ V EILE + + K F+ +I YG++G F A+KV M +
Sbjct: 77 TVRRLAAAKKFEWVEEILE--EQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPE 134
Query: 168 NGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ-KFGPEPSAVTYQLILKTFVQGDKFK 226
+S +L+ A +++ E IF+ + K EP +Y ++K F
Sbjct: 135 RNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFT 194
Query: 227 EAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYN 286
EA + + + E LKPD FN++++ G +++ + +A M E+ +++ +YN
Sbjct: 195 EAVALIDEI---ENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYN 251
Query: 287 SL---MSFETNYKEVSNIYDQI 305
+ ++ E +E+ +++D++
Sbjct: 252 ARLLGLAMENKSEEMVSLFDKL 273
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 119/268 (44%), Gaps = 11/268 (4%)
Query: 37 RRLEVVCKGMLTPRKFMQRRRKNTVFKDAADEAEKKNWWKLMEQIDQAGSAVSVLSDEKL 96
R V+ KG PR + R F A+ + ++N + + Q + A+ + D +
Sbjct: 14 HRHTVLLKG--NPRTTLCWERS---FAGASSDDCRENLSRKVLQDLKLDDAIGLFGD-MV 67
Query: 97 KNQTIPKDLVIGTLVR-FKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDF 155
K++ P + L+ ++ K++LVI + E ++N + + I + +
Sbjct: 68 KSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGI-SHNLYTYSIFINYFCRRSQL 126
Query: 156 NGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLI 215
+ A +L M K GY P++V+ SL+ + G R + A A+ +M + G +P VT+ +
Sbjct: 127 SLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTL 186
Query: 216 LKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAE 275
+ Q +K EA + E ++ +PD + +I K G D A M +
Sbjct: 187 VHGLFQHNKASEAVALVERMV---VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK 243
Query: 276 RGIEQSTVTYNSLMSFETNYKEVSNIYD 303
IE V YN+++ YK + + +D
Sbjct: 244 GKIEADVVIYNTIIDGLCKYKHMDDAFD 271
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G+ K +V M++ G N V+ T+L+ + + +NA+ +F++M G
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 421
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P +TY ++L + A VFE + +K +K D + MI KAG +
Sbjct: 422 VHPDIMTYNILLDGLCNNGNVETALVVFEYM---QKRDMKLDIVTYTTMIEALCKAGKVE 478
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
F ++ +G++ + VTY ++MS
Sbjct: 479 DGWDLFCSLSLKGVKPNVVTYTTMMS 504
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 93/202 (46%), Gaps = 8/202 (3%)
Query: 91 LSDEKLKNQTIPKDLVI-GTLVRFKQLKKWNLVIEILEWLRNQSWWDF--GKMDFIMLIT 147
L DE +K++ D+V TL+ K K+ V E +E R S + + LI
Sbjct: 342 LYDEMVKSKHCFPDVVAYNTLI--KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399
Query: 148 GYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEP 207
G+ + D + A+ V M +G P++++ L++ G A +F MQK +
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459
Query: 208 SAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKAR 267
VTY +++ + K ++ ++F +L +KP+ + M+ + + G ++A
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSL---SLKGVKPNVVTYTTMMSGFCRKGLKEEAD 516
Query: 268 KTFALMAERGIEQSTVTYNSLM 289
F M E G ++ TYN+L+
Sbjct: 517 ALFVEMKEDGPLPNSGTYNTLI 538
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 2/145 (1%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
+I G K + A + M G P+V + L+ GR+++A + M +
Sbjct: 256 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN 315
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P V + ++ FV+ K EAE++++ ++ + PD +N +I + K +
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHC--FPDVVAYNTLIKGFCKYKRVE 373
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
+ + F M++RG+ +TVTY +L+
Sbjct: 374 EGMEVFREMSQRGLVGNTVTYTTLI 398
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
++ G K+GD A +L+ M + P+VV +++++ K G +++A+ +F M + G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ TY ++ F ++ +A+ + +++ E + PD FN +I K G
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE---INPDVLTFNALISASVKEGKLF 383
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
+A K M R I TVTYNS++
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMI 408
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 110/230 (47%), Gaps = 23/230 (10%)
Query: 78 MEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWN------LVIEILEWLRN 131
M ++ SA+++LS K++ I D+VI + + + K + L E+LE
Sbjct: 271 MCKMGDTKSALNLLS--KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 132 QSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYN 191
+ + + M I G+ G ++ A+++L M + P+V++ +L+ A K G+
Sbjct: 329 PNVFTYNCM-----IDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 192 NAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFN 251
AE + M P VTY ++ F + ++F +A+ +F+ + PD FN
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM-------ASPDVVTFN 436
Query: 252 MMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNI 301
+I +Y +A D+ + ++ RG+ +T TYN+L+ + EV N+
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIH---GFCEVDNL 483
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 3/149 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F +I Y + + ++L +++ G N + +L+ + + N A+ +F+ M
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G P +T ++L F + +K +EA E+FE + + S + D +N++I+ K
Sbjct: 495 SHGVCPDTITCNILLYGFCENEKLEEALELFEVI---QMSKIDLDTVAYNIIIHGMCKGS 551
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMS 290
D+A F + G+E TYN ++S
Sbjct: 552 KVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G+ ++ + N A+ + M +G P+ ++ L+ + + + A +F +Q
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+ V Y +I+ +G K EA ++F +L ++PD + +N+MI + +
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL---PIHGVEPDVQTYNVMISGFCGKSAIS 589
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
A F M + G E TYN+L+
Sbjct: 590 DANVLFHKMKDNGHEPDNSTYNTLI 614
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
+I G+ K F+ A+ + LM P+VV+ ++++ Y + R + + R + + G
Sbjct: 407 MIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+ TY ++ F + D A+++F+ ++ + PD N+++Y + + +
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI---SHGVCPDTITCNILLYGFCENEKLE 519
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
+A + F ++ I+ TV YN ++
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIII 544
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 103/209 (49%), Gaps = 6/209 (2%)
Query: 83 QAGSAVSVLSDEKLKNQTIPKDLVIGTLVR-FKQLKKWNLVIEILEWLRNQSWWDFGKMD 141
+ G AVS+L + + +N +P T++R F + K+ +E+ ++ S + +
Sbjct: 157 ECGKAVSLLREMR-RNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKG-SGCSWSLVT 214
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ +LI + K G + A L M G ++V TSL+ + G + +A+F +
Sbjct: 215 WGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVL 274
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ G P A+TY +++ F + + KEA E+FE +++ ++P+ + +I G
Sbjct: 275 ERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIE---RGVRPNVYTYTGLIDGLCGVG 331
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMS 290
+A + LM E+ E + VTYN +++
Sbjct: 332 KTKEALQLLNLMIEKDEEPNAVTYNIIIN 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 8/168 (4%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G+ KLG A ++ M + G PNV + T L++ G+ A + M +
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
EP+AVTY +I+ + +A E+ E + +K +PD +N+++ G D
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELM---KKRRTRPDNITYNILLGGLCAKGDLD 404
Query: 265 KARKTFALMAERG--IEQSTVTYNSL---MSFETNYKEVSNIYDQILK 307
+A K LM + + ++YN+L + E + +IYD +++
Sbjct: 405 EASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 75/166 (45%), Gaps = 3/166 (1%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ +I G+ K G N A+ +L M + P+V L+ + K G + A +F MQ
Sbjct: 497 YTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQ 556
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ P V++ +++ ++ K AE + L+ ++ L PD ++ +I + K G
Sbjct: 557 RDNNFPDVVSFNIMIDGSLKAGDIKSAESL---LVGMSRAGLSPDLFTYSKLINRFLKLG 613
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYDQILK 307
D+A F M + G E +S++ + + E + + + K
Sbjct: 614 YLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKK 659
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 80/182 (43%), Gaps = 4/182 (2%)
Query: 108 GTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNK 167
G L + Q++K +L + + + F + +L+ G + + A +L M +
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRGFA-FNVYNHNILLKGLCRNLECGKAVSLLREMRR 170
Query: 168 NGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKE 227
N P+V S +++ + +G A + M+ G S VT+ +++ F + K E
Sbjct: 171 NSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDE 230
Query: 228 AEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNS 287
A + + + L+ D ++ +I + G D+ + F + ERG +TYN+
Sbjct: 231 AMGFLKEM---KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287
Query: 288 LM 289
L+
Sbjct: 288 LI 289
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 161 VLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFV 220
VLALM K G+ NV + L++ + A ++ R M++ P +Y +++ F
Sbjct: 129 VLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFC 188
Query: 221 QGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQ 280
+G KE E+ E + + S + ++I + KAG D+A M G+E
Sbjct: 189 EG---KELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA 245
Query: 281 STVTYNSLMSFETNYKEVSN---IYDQILK 307
V Y SL+ + E+ ++D++L+
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLE 275
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 3/147 (2%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
+L+ K GD N A ++ ++ + N + T++++ + K G N A+ + +M+
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS 523
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
+PS Y +L + + +A +FE + D PD FN+MI KAG
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF---PDVVSFNIMIDGSLKAGDI 580
Query: 264 DKARKTFALMAERGIEQSTVTYNSLMS 290
A M+ G+ TY+ L++
Sbjct: 581 KSAESLLVGMSRAGLSPDLFTYSKLIN 607
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
++ G K+GD A +L+ M + P+VV +++++ K G +++A+ +F M + G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ TY ++ F ++ +A+ + +++ E + PD FN +I K G
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE---INPDVLTFNALISASVKEGKLF 383
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
+A K M R I TVTYNS++
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMI 408
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 110/230 (47%), Gaps = 23/230 (10%)
Query: 78 MEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWN------LVIEILEWLRN 131
M ++ SA+++LS K++ I D+VI + + + K + L E+LE
Sbjct: 271 MCKMGDTKSALNLLS--KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 132 QSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYN 191
+ + + M I G+ G ++ A+++L M + P+V++ +L+ A K G+
Sbjct: 329 PNVFTYNCM-----IDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 192 NAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFN 251
AE + M P VTY ++ F + ++F +A+ +F+ + PD FN
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM-------ASPDVVTFN 436
Query: 252 MMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNI 301
+I +Y +A D+ + ++ RG+ +T TYN+L+ + EV N+
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIH---GFCEVDNL 483
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 89/201 (44%), Gaps = 9/201 (4%)
Query: 91 LSDEKLKNQTIPKDLVIGTLVR-FKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGY 149
L DE L P + +++ F + +++ + + + + F +I Y
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNT-----IIDVY 442
Query: 150 GKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSA 209
+ + ++L +++ G N + +L+ + + N A+ +F+ M G P
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502
Query: 210 VTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKT 269
+T ++L F + +K +EA E+FE + + S + D +N++I+ K D+A
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVI---QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 559
Query: 270 FALMAERGIEQSTVTYNSLMS 290
F + G+E TYN ++S
Sbjct: 560 FCSLPIHGVEPDVQTYNVMIS 580
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G+ ++ + N A+ + M +G P+ ++ L+ + + + A +F +Q
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+ V Y +I+ +G K EA ++F +L ++PD + +N+MI + +
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL---PIHGVEPDVQTYNVMISGFCGKSAIS 589
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
A F M + G E TYN+L+
Sbjct: 590 DANVLFHKMKDNGHEPDNSTYNTLI 614
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
+L+ K GD AEK+L+ M + G P++ + +L+ Y K + A ++ RM++
Sbjct: 208 VLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERS 267
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
G P+ VTY + F + + +EA +F + DD + + + +I Y +
Sbjct: 268 GVAPNIVTYNSFIHGFSREGRMREATRLFREIKDD----VTANHVTYTTLIDGYCRMNDI 323
Query: 264 DKARKTFALMAERGIEQSTVTYNSLM 289
D+A + +M RG VTYNS++
Sbjct: 324 DEALRLREVMESRGFSPGVVTYNSIL 349
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ LI GY ++ D + A ++ +M G+ P VV+ S++ + GR A + M
Sbjct: 310 YTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMS 369
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
EP +T ++ + + + A +V + +++ S LK D + +I+ + K
Sbjct: 370 GKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIE---SGLKLDMYSYKALIHGFCKVL 426
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
+ A++ M E+G TY+ L+
Sbjct: 427 ELENAKEELFSMIEKGFSPGYATYSWLV 454
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Query: 180 LMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDE 239
LM Y K G N++ +F +++ G +P ++L + V+ ++F+ ++
Sbjct: 139 LMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMV--- 195
Query: 240 KSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
K + + ++N++++ K+G +KA K + M E+G+ TYN+L+S
Sbjct: 196 KLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLIS 246
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 75/167 (44%), Gaps = 6/167 (3%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F L+ Y K G N + V + G P++ + T L+ + K + IF++M
Sbjct: 136 FSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMV 195
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
K G + Y +++ + ++AE++ + E+ + PD +N +I +Y K
Sbjct: 196 KLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEM---EEKGVFPDIFTYNTLISVYCKKS 252
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM---SFETNYKEVSNIYDQI 305
+ +A M G+ + VTYNS + S E +E + ++ +I
Sbjct: 253 MHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI 299
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 5/204 (2%)
Query: 87 AVSVLSDEKLKNQTIPKDLVIGTLVR-FKQLKKWNLVIEILEWLRNQSWWDFGKMDFIML 145
A +VLSD +P +L+ + + L +E+L +RN+ + +L
Sbjct: 372 AKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKP-NVYSYTIL 430
Query: 146 ITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGP 205
+ G+ KLG + A VL M+ +G PN V L+ A+ K R A IFR M + G
Sbjct: 431 VDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC 490
Query: 206 EPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDK 265
+P T+ ++ + D+ K A + ++ + + + +N +I + + G +
Sbjct: 491 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG---VVANTVTYNTLINAFLRRGEIKE 547
Query: 266 ARKTFALMAERGIEQSTVTYNSLM 289
ARK M +G +TYNSL+
Sbjct: 548 ARKLVNEMVFQGSPLDEITYNSLI 571
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 3/146 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI GY K G A +VL M G PNV S T L++ + K G+ + A + M G
Sbjct: 395 LIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG 454
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+P+ V + ++ F + + EA E+F + + KPD FN +I +
Sbjct: 455 LKPNTVGFNCLISAFCKEHRIPEAVEIFREM---PRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
A M G+ +TVTYN+L++
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLIN 537
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 15/213 (7%)
Query: 81 IDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKM 140
+++ SA+S+L D K+ +P ++ TL+ L K N V E L+ L + + G +
Sbjct: 230 VNEIDSALSLLRDMT-KHGCVPNSVIYQTLIH--SLSKCNRVNEALQLL--EEMFLMGCV 284
Query: 141 ----DFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAI 196
F +I G K N A K++ M G+ P+ ++ LM K GR + A+ +
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344
Query: 197 FRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYM 256
F R+ P+P V + ++ FV + +A+ V ++ + PD +N +IY
Sbjct: 345 FYRI----PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMV--TSYGIVPDVCTYNSLIYG 398
Query: 257 YKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
Y K G A + M +G + + +Y L+
Sbjct: 399 YWKEGLVGLALEVLHDMRNKGCKPNVYSYTILV 431
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI + + G+ A K++ M G P + ++ SL++ + G + A ++F +M + G
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
PS ++ +++ + +EA E + ++ +P D FN +I +AG +
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTP---DIVTFNSLINGLCRAGRIE 651
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
F + GI TVT+N+LMS
Sbjct: 652 DGLTMFRKLQAEGIPPDTVTFNTLMS 677
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Query: 141 DFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRM 200
++++++ Y + G AE +L M G+ PN+++ +L+ YGK + A+ +F R+
Sbjct: 316 NWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRL 375
Query: 201 QKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKA 260
G EP +Y+ +++ + + D ++EA+ ++ L ++ KP+ +I + K
Sbjct: 376 CNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQEL---KRCGYKPNSFNLFTLINLQAKY 432
Query: 261 GSYDKARKTFALMAERGIEQSTVTYNSLMSFE 292
G D A KT M G + S++ L ++E
Sbjct: 433 GDRDGAIKTIEDMTGIGCQYSSILGIILQAYE 464
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 138 GKMDFI---MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAE 194
G +D I +I YGK D+ + M +G+ ++ + +L++AYGK +
Sbjct: 729 GVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFR 788
Query: 195 AIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMI 254
+I +RM+K P TY +++ + + E +V + L ++S L PD +N +I
Sbjct: 789 SILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKEL---KESGLGPDLCSYNTLI 845
Query: 255 YMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
Y G ++A M R I VTY +L++
Sbjct: 846 KAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVT 881
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 4/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F +L+ YGK F ++ L ++G +V+S +++ AYGK Y N + + MQ
Sbjct: 702 FNVLLDVYGKAKLFKKVNELFLLAKRHG-VVDVISYNTIIAAYGKNKDYTNMSSAIKNMQ 760
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G S Y +L + K K+ E+ L +KS PD +N+MI +Y + G
Sbjct: 761 FDGFSVSLEAYNTLLDAY---GKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQG 817
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
D+ + E G+ +YN+L+
Sbjct: 818 WIDEVADVLKELKESGLGPDLCSYNTLI 845
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 90/195 (46%), Gaps = 11/195 (5%)
Query: 98 NQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWD--FGKMDFIMLITGYGKLGDF 155
NQT LV+ + K +V + L LR + W D F + +LI + G
Sbjct: 487 NQTSFSSLVMAYV-------KHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQL 539
Query: 156 NGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLI 215
A K+ ++ N+ +++++ Y G ++ AE ++ ++ G + + ++
Sbjct: 540 TDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIV 599
Query: 216 LKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAE 275
++ +V+ +EA V E + DE+ + PD +F M+ +Y+K DK + + + +
Sbjct: 600 VRMYVKAGSLEEACSVLEIM--DEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRK 657
Query: 276 RGIEQSTVTYNSLMS 290
GI + YN +++
Sbjct: 658 SGIHWNQEMYNCVIN 672
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 3/146 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G+ K ++ M+ G + V+ T+L++ G +NA+ +F++M G
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P +TY ++L K ++A EVF+ + +KS +K D ++ MI KAG D
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVFDYM---QKSEIKLDIYIYTTMIEGMCKAGKVD 522
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
F ++ +G++ + VTYN+++S
Sbjct: 523 DGWDLFCSLSLKGVKPNVVTYNTMIS 548
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 77/148 (52%), Gaps = 6/148 (4%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
I + YG+ D A ++L+ M + PN+V+ +L++A+ K G++ AE ++ M
Sbjct: 301 LISCLCSYGRWSD---ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 357
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
K +P TY ++ F D+ +A+++FE ++ + PD +N +I + K+
Sbjct: 358 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD---CFPDVVTYNTLIKGFCKSK 414
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
+ + F M+ RG+ TVTY +L+
Sbjct: 415 RVEDGTELFREMSHRGLVGDTVTYTTLI 442
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Query: 165 MNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDK 224
M G PNVV+ +SL+ GR+++A + M + P+ VT+ ++ FV+ K
Sbjct: 286 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 345
Query: 225 FKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVT 284
F EAE++++ ++ K + PD +N ++ + DKA++ F M + VT
Sbjct: 346 FVEAEKLYDDMI---KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 402
Query: 285 YNSLM 289
YN+L+
Sbjct: 403 YNTLI 407
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 89/191 (46%), Gaps = 4/191 (2%)
Query: 110 LVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNG 169
L ++KK+++VI + E ++ G + +LI + + + A +L M K G
Sbjct: 92 LSAIAKMKKFDVVISLGEKMQRLEIV-HGLYTYNILINCFCRRSQISLALALLGKMMKLG 150
Query: 170 YPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAE 229
Y P++V+ +SL+ Y G R ++A A+ +M + G P +T+ ++ +K EA
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 230 EVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+ + ++ + +P+ + +++ K G D A M IE V +N+++
Sbjct: 211 ALVDRMV---QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 290 SFETNYKEVSN 300
Y+ V +
Sbjct: 268 DSLCKYRHVDD 278
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 3/153 (1%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F LI + K G F AEK+ M K P++ + SL+ + R + A+ +F M
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
P VTY ++K F + + ++ E+F + L D + +I G
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM---SHRGLVGDTVTYTTLIQGLFHDG 449
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETN 294
D A+K F M G+ +TY+ L+ N
Sbjct: 450 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 482
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 32/178 (17%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
++I G K G + A + M G N+++ L+ + GR+++ + R M K
Sbjct: 268 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSP--------------------- 242
P+ VT+ +++ +FV+ K +EAEE+ + ++ +P
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387
Query: 243 -----------LKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
P+ + FN++I Y KA D + F M+ RG+ TVTYN+L+
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 9/148 (6%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G+ +LG N A+++ M PPN+V+ L++ G A IF +++K
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPL---KPDQKMFNMMIYMYKKAG 261
E Y +I+ K +A ++F +L PL KP K +N+MI K G
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSL------PLKGVKPGVKTYNIMIGGLCKKG 557
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
+A F M E G TYN L+
Sbjct: 558 PLSEAELLFRKMEEDGHAPDGWTYNILI 585
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F LI G G + A +++ M + G+ P++++ +L+ G+ A + +M
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV 220
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
++G +P+AVTY +L + + A E+ + E+ +K D ++++I K G
Sbjct: 221 EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM---EERNIKLDAVKYSIIIDGLCKHG 277
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
S D A F M +GI + +TYN L+
Sbjct: 278 SLDNAFNLFNEMEMKGITTNIITYNILI 305
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 75/159 (47%), Gaps = 3/159 (1%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G+ K + A +++ LM G PN+ + L+ Y K R ++ +FR+M G
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
VTY +++ F + K A+E+F+ ++ K P P+ + +++ G +
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMV-SRKVP--PNIVTYKILLDGLCDNGESE 490
Query: 265 KARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYD 303
KA + F + + +E YN ++ N +V + +D
Sbjct: 491 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 529
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 86/185 (46%), Gaps = 8/185 (4%)
Query: 105 LVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLAL 164
LV G + K+ + L+ +++E+ + +G + +M +G L A ++L
Sbjct: 199 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL-----AMELLRK 253
Query: 165 MNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDK 224
M + + V + +++ K G +NA +F M+ G + +TY +++ F +
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 313
Query: 225 FKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVT 284
+ + ++ ++ K + P+ F+++I + K G +A + M RGI T+T
Sbjct: 314 WDDGAKLLRDMI---KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 370
Query: 285 YNSLM 289
Y SL+
Sbjct: 371 YTSLI 375
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 75/148 (50%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ +LI Y K + ++ ++ G PN ++ +L+ + + G+ N A+ +F+ M
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 447
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G PS VTY ++L + +A E+FE + +KS + ++N++I+ A
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM---QKSRMTLGIGIYNIIIHGMCNAS 504
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
D A F ++++G++ VTYN ++
Sbjct: 505 KVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 66/145 (45%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ G+ + G N A+++ M G PP+VV+ L++ G N A IF +MQK
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
Y +I+ K +A +F +L D +KPD +N+MI K GS
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD---KGVKPDVVTYNVMIGGLCKKGSLS 542
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
+A F M E G TYN L+
Sbjct: 543 EADMLFRKMKEDGCTPDDFTYNILI 567
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G G ++ K+L M P+VV+ ++L++ + K G+ A+ ++ M G
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P +TY ++ F + + EA ++F+ ++ +PD ++++I Y KA D
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMV---SKGCEPDIVTYSILINSYCKAKRVD 402
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
+ F ++ +G+ +T+TYN+L+
Sbjct: 403 DGMRLFREISSKGLIPNTITYNTLV 427
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ ++I K G F+ A + M G +VV+ +SL+ G++++ + R M
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
P VT+ ++ FV+ K EA+E++ ++ + PD +N +I + K
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI---TRGIAPDTITYNSLIDGFCKEN 364
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSN 300
+A + F LM +G E VTY+ L++ K V +
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDD 403
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 104/243 (42%), Gaps = 21/243 (8%)
Query: 65 AADEAEKKNWWKLMEQIDQAGSAV--SVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLV 122
+ + A + ++ ME+ + S V S++ D K+ + L + + K +K +
Sbjct: 223 SGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT 282
Query: 123 IE-ILEWLRNQSWWDFGK---------------MDFIMLITGYGKLGDFNGAEKVLALMN 166
++ L N WD G + F LI + K G A+++ M
Sbjct: 283 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 342
Query: 167 KNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFK 226
G P+ ++ SL++ + K + A +F M G EP VTY +++ ++ + +
Sbjct: 343 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 402
Query: 227 EAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYN 286
+ +F + L P+ +N ++ + ++G + A++ F M RG+ S VTY
Sbjct: 403 DGMRLFREI---SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 459
Query: 287 SLM 289
L+
Sbjct: 460 ILL 462
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 7/164 (4%)
Query: 135 WDFG----KMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRY 190
W G + F L+ G+ G + A ++ M + P++V+ ++L+ GR
Sbjct: 132 WKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRV 191
Query: 191 NNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMF 250
+ A + RM ++G +P VTY +L + A ++F + E+ +K +
Sbjct: 192 SEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM---EERNIKASVVQY 248
Query: 251 NMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETN 294
+++I K GS+D A F M +GI+ VTY+SL+ N
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 12/203 (5%)
Query: 109 TLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIM-LITGYGKLGDFNGAEKVLALMNK 167
T+ R K+ + V EILE + + D K F +I+ YGK G F A+KV M
Sbjct: 80 TVRRLVAAKRLHYVEEILE--EQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPN 137
Query: 168 NGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ-KFGPEPSAVTYQLILKTFVQGDKFK 226
+V+S +L+ AY +++ E +F + K +P V+Y ++K + D
Sbjct: 138 RDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLP 197
Query: 227 EAEEVFETLLDD-EKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTY 285
EA LLD+ E LKPD FN ++ G ++ + +A M E+ + TY
Sbjct: 198 EA----VALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTY 253
Query: 286 NSL---MSFETNYKEVSNIYDQI 305
N+ ++ E KE+ N++ ++
Sbjct: 254 NARLLGLANEAKSKELVNLFGEL 276
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 78/150 (52%), Gaps = 3/150 (2%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+ + LI Y K +++ A K+L M + G P++V+ L+ G ++A + +
Sbjct: 381 LSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVK 440
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
+ G P A Y +++ + +F A+ +F +LD + PD ++ +I + +
Sbjct: 441 LIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRN---ILPDAYVYATLIDGFIR 497
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+G +D+ARK F+L E+G++ V +N+++
Sbjct: 498 SGDFDEARKVFSLSVEKGVKVDVVHHNAMI 527
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 11/201 (5%)
Query: 93 DEKLKNQTIPKDLVIGTLVR-FKQLKKWNLVIEILEWLRNQSWWDFGKMDFI---MLITG 148
DE K IP +L L++ + + K++++ ++L + + K D + +LI G
Sbjct: 369 DEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGC----KPDIVTYGILIHG 424
Query: 149 YGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPS 208
G + A + + G P+ LM K GR+ A+ +F M P
Sbjct: 425 LVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPD 484
Query: 209 AVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARK 268
A Y ++ F++ F EA +VF L EK +K D N MI + ++G D+A
Sbjct: 485 AYVYATLIDGFIRSGDFDEARKVFS--LSVEKG-VKVDVVHHNAMIKGFCRSGMLDEALA 541
Query: 269 TFALMAERGIEQSTVTYNSLM 289
M E + TY++++
Sbjct: 542 CMNRMNEEHLVPDKFTYSTII 562
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
+I G+ + G + A + MN+ P+ + +++++ Y K A IFR M+K
Sbjct: 526 MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNK 585
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMI-YMYKKAGSY 263
+P+ VTY ++ F FK AEE F+ + + L P+ + +I + K++ +
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFKMAEETFKEM---QLRDLVPNVVTYTTLIRSLAKESSTL 642
Query: 264 DKARKTFALMAERGIEQSTVTYNSLM 289
+KA + LM + VT+N L+
Sbjct: 643 EKAVYYWELMMTNKCVPNEVTFNCLL 668
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 2/124 (1%)
Query: 139 KMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFR 198
K + +I GY K D A K+ M KN PNVV+ TSL+ + G + AE F+
Sbjct: 555 KFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFK 614
Query: 199 RMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYK 258
MQ P+ VTY ++++ + E + L+ K P++ FN ++ +
Sbjct: 615 EMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCV--PNEVTFNCLLQGFV 672
Query: 259 KAGS 262
K S
Sbjct: 673 KKTS 676
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 81/164 (49%), Gaps = 8/164 (4%)
Query: 149 YGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRY--NNAEAIFRRMQKFGPE 206
Y + G F+ A++++ M + G P+++S +L+ A K G N A + ++ G
Sbjct: 235 YSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLR 294
Query: 207 PSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKA 266
P A+TY +L + A +VFE D E +PD +N MI +Y + G +A
Sbjct: 295 PDAITYNTLLSACSRDSNLDGAVKVFE---DMEAHRCQPDLWTYNAMISVYGRCGLAAEA 351
Query: 267 RKTFALMAERGIEQSTVTYNSLM---SFETNYKEVSNIYDQILK 307
+ F + +G VTYNSL+ + E N ++V +Y Q+ K
Sbjct: 352 ERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQK 395
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 120 NLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTS 179
NL +E+L+ +RN S + + L++ + + +GA KV M + P++ + +
Sbjct: 279 NLAVELLDMVRN-SGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNA 337
Query: 180 LMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDE 239
++ YG+ G AE +F ++ G P AVTY +L F + ++ +EV++ + +
Sbjct: 338 MISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQM---Q 394
Query: 240 KSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALM-AERGIEQSTVTYNSLM 289
K D+ +N +I+MY K G D A + + M G +TY L+
Sbjct: 395 KMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLI 445
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 3/133 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
+I YGK + AE V+ + ++G P++ + SLM AY + G Y A AIF M + G
Sbjct: 758 IIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDG 817
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P P+ + ++L + +E V E L D K + +M+ + +AG+
Sbjct: 818 PSPTVESINILLHALCVDGRLEELYVVVEELQD---MGFKISKSSILLMLDAFARAGNIF 874
Query: 265 KARKTFALMAERG 277
+ +K ++ M G
Sbjct: 875 EVKKIYSSMKAAG 887
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 3/141 (2%)
Query: 149 YGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPS 208
Y + D+ +V + + G P+ + +L+ Y + R + ++M+ G +P
Sbjct: 937 YTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPK 996
Query: 209 AVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARK 268
TY+ ++ F + ++AE++FE LL LK D+ ++ M+ + + +GS KA K
Sbjct: 997 LDTYKSLISAFGKQKCLEQAEQLFEELL---SKGLKLDRSFYHTMMKISRDSGSDSKAEK 1053
Query: 269 TFALMAERGIEQSTVTYNSLM 289
+M GIE + T + LM
Sbjct: 1054 LLQMMKNAGIEPTLATMHLLM 1074
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Query: 137 FGK--MDFIMLITGYGKLGDFNGAEKVLALMNK-NGYPPNVVSQTSLMEAYGKGGRYNNA 193
FGK M + +I YGK G + A ++ M +G P+ ++ T L+++ GK R A
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEA 457
Query: 194 EAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMM 253
A+ M G +P+ TY ++ + + K +EAE+ F +L +S KPD +++M
Sbjct: 458 AALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCML---RSGTKPDNLAYSVM 514
Query: 254 IYMYKKAGSYDKARKTFALMAERGIEQSTVTY 285
+ + + KA + M G S Y
Sbjct: 515 LDVLLRGNETRKAWGLYRDMISDGHTPSYTLY 546
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 101/225 (44%), Gaps = 13/225 (5%)
Query: 72 KNWWKLMEQIDQAGS--AVSVLSDEKLKNQTIPK----DLVIGTLVRFKQLKKWNLVIEI 125
K W LM Q G + + +++ P ++++ L +L++ +V+E
Sbjct: 788 KTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEE 847
Query: 126 LEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYG 185
L+ + K ++++ + + G+ +K+ + M GY P + ++E
Sbjct: 848 LQ----DMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLC 903
Query: 186 KGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKP 245
KG R +AE + M++ + + +LK + + +K+ +V++ + +++ L+P
Sbjct: 904 KGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRI---KETGLEP 960
Query: 246 DQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
D+ +N +I MY + ++ M G++ TY SL+S
Sbjct: 961 DETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLIS 1005
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 91/194 (46%), Gaps = 8/194 (4%)
Query: 106 VIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGK-LGDFNGAEKVLAL 164
++ L R+K + +I N+ + F F +++ G+ +G AE+V
Sbjct: 238 LLSALCRYKNVSDAGHLI-----FCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWME 292
Query: 165 MNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDK 224
M G +VVS +S++ Y KGG N +F RM+K EP Y ++ +
Sbjct: 293 MGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASF 352
Query: 225 FKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVT 284
EA + +T+ +E+ ++P+ +N +I KA ++A++ F M E+G+ + T
Sbjct: 353 VSEARNLMKTM--EEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRT 410
Query: 285 YNSLMSFETNYKEV 298
Y++ M +EV
Sbjct: 411 YHAFMRILRTGEEV 424
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 80/194 (41%), Gaps = 41/194 (21%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFR------ 198
LI GY +GD G +VL LM++ G NVV+ TSL++ Y K G AE +F
Sbjct: 267 LINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKK 326
Query: 199 -----------------------------RMQKFGPEPSAVTYQLILKTFVQGDKFKEAE 229
M + G + ++ + + + EAE
Sbjct: 327 LVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAE 386
Query: 230 EVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
++F + D LKPD +N ++ Y +AG D+A K M ++ + + +TYN L+
Sbjct: 387 QIFSRMND---WSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL 443
Query: 290 SFETNYKEVSNIYD 303
Y + +D
Sbjct: 444 K---GYSRIGAFHD 454
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 82/168 (48%), Gaps = 3/168 (1%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
M + +L+ GY ++G F+ + +M K G + +S ++L+EA K G +N A ++
Sbjct: 437 MTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWEN 496
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
+ G +T +++ + +K EA+E+ + + KP + + + + Y K
Sbjct: 497 VLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNV---NIFRCKPAVQTYQALSHGYYK 553
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYDQILK 307
G+ +A M +GI + YN+L+S Y+ ++ + D +++
Sbjct: 554 VGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIE 601
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
Query: 169 GYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEA 228
G NVV+ SL+ Y G + R M + G + VTY ++K + + +EA
Sbjct: 256 GLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEA 315
Query: 229 EEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSL 288
E VFE LL ++K L DQ M+ +++ Y + G A + M E G+ +T NSL
Sbjct: 316 EHVFE-LLKEKK--LVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSL 372
Query: 289 MS 290
++
Sbjct: 373 IN 374
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 68/146 (46%), Gaps = 3/146 (2%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
+L+ GY + G A +V M + G N SL+ Y K G+ AE IF RM +
Sbjct: 336 VLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDW 395
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
+P TY ++ + + EA ++ + + E + P +N+++ Y + G++
Sbjct: 396 SLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKE---VVPTVMTYNILLKGYSRIGAF 452
Query: 264 DKARKTFALMAERGIEQSTVTYNSLM 289
+ +M +RG+ ++ ++L+
Sbjct: 453 HDVLSLWKMMLKRGVNADEISCSTLL 478
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 94/193 (48%), Gaps = 10/193 (5%)
Query: 102 PKDLVI-GTLVRFKQLKKWNLVIEILEW---LRNQSWWDFGKMDFIMLITGYGKLGDFNG 157
P D+VI G LV L K L++ + + + QS + F LI G+ +L F+
Sbjct: 458 PPDVVIYGVLV--DGLSKQGLMLHAMRFSVKMLGQSIR-LNVVVFNSLIDGWCRLNRFDE 514
Query: 158 AEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILK 217
A KV LM G P+V + T++M GR A +F RM K G EP A+ Y ++
Sbjct: 515 ALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLID 574
Query: 218 TFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERG 277
F + K ++F+ + +++ + D + N++I++ K + A K F + E
Sbjct: 575 AFCKHMKPTIGLQLFDLM---QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK 631
Query: 278 IEQSTVTYNSLMS 290
+E VTYN+++
Sbjct: 632 MEPDIVTYNTMIC 644
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 7/210 (3%)
Query: 79 EQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFG 138
+I+ A + L + K++ + + +I ++L + + E+L+ + +
Sbjct: 615 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV----TPFGPN 670
Query: 139 KMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFR 198
+ +LI K D +GA ++ ++M + G PN V+ LM+ + K + +F
Sbjct: 671 TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 730
Query: 199 RMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYK 258
MQ+ G PS V+Y +I+ + + EA +F +D + L PD + ++I Y
Sbjct: 731 EMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAID---AKLLPDVVAYAILIRGYC 787
Query: 259 KAGSYDKARKTFALMAERGIEQSTVTYNSL 288
K G +A + M G++ + +L
Sbjct: 788 KVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 6/153 (3%)
Query: 158 AEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILK 217
A ++L+L+ G PNVV+ +L+ + K G + A +F+ M++ G EP + Y ++
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 218 TFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERG 277
+ + ++F L +K D +F+ I +Y K+G A + M +G
Sbjct: 330 GYFKAGMLGMGHKLFSQAL---HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 278 IEQSTVTYNSL---MSFETNYKEVSNIYDQILK 307
I + VTY L + + E +Y QILK
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK 419
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 160 KVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTF 219
++ LM +N ++ ++ K R +A F + + EP VTY ++ +
Sbjct: 587 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY 646
Query: 220 VQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIE 279
+ EAE +FE L + +P P+ ++I++ K D A + F++MAE+G +
Sbjct: 647 CSLRRLDEAERIFELL---KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 703
Query: 280 QSTVTYNSLM 289
+ VTY LM
Sbjct: 704 PNAVTYGCLM 713
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 139 KMDFIML---ITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEA 195
K+D ++ I Y K GD A V M G PNVV+ T L++ + GR A
Sbjct: 353 KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFG 412
Query: 196 IFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIY 255
++ ++ K G EPS VTY ++ F + + ++E ++ K PD ++ +++
Sbjct: 413 MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI---KMGYPPDVVIYGVLVD 469
Query: 256 MYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
K G A + M + I + V +NSL+
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 9/148 (6%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI GY K G K+ + G +VV +S ++ Y K G A +++RM G
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ VTY +++K Q + EA ++ +L K ++P ++ +I + K G+
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQIL---KRGMEPSIVTYSSLIDGFCKCGNL- 442
Query: 265 KARKTFAL---MAERGIEQSTVTYNSLM 289
R FAL M + G V Y L+
Sbjct: 443 --RSGFALYEDMIKMGYPPDVVIYGVLV 468
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 160 KVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTF 219
+VL LM + +V++ +++M A+ G A +F+ M K G +P A Y ++ K +
Sbjct: 341 QVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGY 400
Query: 220 VQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIE 279
V+ + K+AEE+ ETL+ + +P+ +F +I + GS D A + F M + G+
Sbjct: 401 VRAKEPKKAEELLETLIVES----RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVS 456
Query: 280 QSTVTYNSLM 289
+ T+ +LM
Sbjct: 457 PNIKTFETLM 466
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNG---YPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
LI GYG G + ++L LM + G PN+ + L++A+ K + A + ++M+
Sbjct: 156 LIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKME 215
Query: 202 KFGPEPSAVTYQLILKTFVQ-GDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKA 260
+ G P VTY I +VQ G+ + EV E ++ EK+ KP+ + +++ Y +
Sbjct: 216 ECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKA--KPNGRTCGIVVGGYCRE 273
Query: 261 GSYDKARKTFALMAERGIEQSTVTYNSLMS 290
G + M E +E + V +NSL++
Sbjct: 274 GRVRDGLRFVRRMKEMRVEANLVVFNSLIN 303
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Query: 173 NVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVF 232
V S+T LM + GR + A+ +F+ + + G PS ++Y +L ++ +
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIV 103
Query: 233 ETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+ E+S K D FN +I + ++G+ + A + M E G+ +T TYN+L+
Sbjct: 104 SEV---EQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLI 157
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/151 (17%), Positives = 73/151 (48%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+ + L+ + +++ + ++G + + +++ A+ + G +A +
Sbjct: 81 ISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLK 140
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M++ G P+ TY ++K + K + + E+ + +L++ + P+ + FN+++ + K
Sbjct: 141 MKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCK 200
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
++A + M E G+ TVTYN++ +
Sbjct: 201 KKKVEEAWEVVKKMEECGVRPDTVTYNTIAT 231
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 70/138 (50%), Gaps = 4/138 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ +L GY + + AE++L + P NVV T+++ + G ++A +F +M
Sbjct: 393 YSILAKGYVRAKEPKKAEELLETLIVESRP-NVVIFTTVISGWCSNGSMDDAMRVFNKMC 451
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
KFG P+ T++ ++ +++ + +AEEV + + +KP+ F ++ ++ AG
Sbjct: 452 KFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMM---RGCGVKPENSTFLLLAEAWRVAG 508
Query: 262 SYDKARKTFALMAERGIE 279
D++ K + + IE
Sbjct: 509 LTDESNKAINALKCKDIE 526
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 103/211 (48%), Gaps = 8/211 (3%)
Query: 79 EQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFG 138
+++D+A A +V+ L + + ++ L + K ++K E+ E +R++ D
Sbjct: 182 QKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQ---EVFENMRDRFTPD-- 236
Query: 139 KMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFR 198
+ +L+ G+GK + A +V M G P++V+ + +++ K GR + A I R
Sbjct: 237 SKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVR 296
Query: 199 RMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYK 258
M +P+ Y +++ T+ ++ +EA +T L+ E+S +K D +FN +I +
Sbjct: 297 SMDPSICKPTTFIYSVLVHTYGTENRLEEA---VDTFLEMERSGMKADVAVFNSLIGAFC 353
Query: 259 KAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
KA + M +G+ ++ + N ++
Sbjct: 354 KANRMKNVYRVLKEMKSKGVTPNSKSCNIIL 384
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 113/269 (42%), Gaps = 35/269 (13%)
Query: 30 VTVKMRRRRLEVVCKGMLTPRKFMQRRRKNTVFKDAADEAEKKNWWKLM---------EQ 80
+T+++ R+ CK L+ R + + +D AD A KN K++
Sbjct: 37 MTIRIINRQSRFCCKSFLSARLYSSSEQ----VRDVADVA--KNISKVLMSSPQLVLDSA 90
Query: 81 IDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKM 140
+DQ+G VS +++V L RF+ L +W Q ++
Sbjct: 91 LDQSGLRVS-------------QEVVEDVLNRFRNAGL--LTYRFFQWSEKQRHYEHSVR 135
Query: 141 DFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRM 200
+ M+I K+ + ++ M K NV + +M Y + + + A F M
Sbjct: 136 AYHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKYARAQKVDEAIYAFNVM 194
Query: 201 QKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKA 260
+K+ P+ V + +L + ++A+EVFE + D PD K +++++ + K
Sbjct: 195 EKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR----FTPDSKTYSILLEGWGKE 250
Query: 261 GSYDKARKTFALMAERGIEQSTVTYNSLM 289
+ KAR+ F M + G VTY+ ++
Sbjct: 251 PNLPKAREVFREMIDAGCHPDIVTYSIMV 279
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ +L+ YG A M ++G +V SL+ A+ K R N + + M+
Sbjct: 310 YSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMK 369
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G P++ + +IL+ ++ + EA +VF ++ +PD + M+I M+ +
Sbjct: 370 SKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI----KVCEPDADTYTMVIKMFCEKK 425
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMS 290
+ A K + M ++G+ S T++ L++
Sbjct: 426 EMETADKVWKYMRKKGVFPSMHTFSVLIN 454
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ +I GY LG + A + + K+G PP++ + T L+ A + G ++AE++FR M+
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMK 470
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G + VTY ++ + K + +VFE + + + + PD +N++I+ G
Sbjct: 471 TEGLKLDVVTYNNLMHGY---GKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRG 527
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
D+A + + + RG ST+ + ++
Sbjct: 528 YIDEANEIISELIRRGFVPSTLAFTDVI 555
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 77/146 (52%), Gaps = 8/146 (5%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
M++ GY + A ++++ + + G+ P+ ++ T ++ + K G + A ++ M
Sbjct: 523 MVVRGY-----IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADL 577
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
+P VT +L + + + ++A +F LLD + LKPD ++N +I+ Y G
Sbjct: 578 RMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLD---AGLKPDVVLYNTLIHGYCSVGDI 634
Query: 264 DKARKTFALMAERGIEQSTVTYNSLM 289
+KA + LM +RG+ + T+++L+
Sbjct: 635 EKACELIGLMVQRGMLPNESTHHALV 660
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 3/146 (2%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
+LI + G + AE V M G +VV+ +LM YGK + N + M+
Sbjct: 448 ILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSA 507
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
G P TY +++ + V EA E+ L+ + P F +I + K G +
Sbjct: 508 GISPDVATYNILIHSMVVRGYIDEANEIISELI---RRGFVPSTLAFTDVIGGFSKRGDF 564
Query: 264 DKARKTFALMAERGIEQSTVTYNSLM 289
+A + MA+ ++ VT ++L+
Sbjct: 565 QEAFILWFYMADLRMKPDVVTCSALL 590
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 6/160 (3%)
Query: 146 ITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGP 205
I G+ K+G E+ + L++ PN+ +S + G A IF+ + + G
Sbjct: 348 IDGFCKVGK---PEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGL 404
Query: 206 EPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDK 265
P V Y ++ + + +A + F LL KS P ++I + GS
Sbjct: 405 LPDCVCYTTMIDGYCNLGRTDKAFQYFGALL---KSGNPPSLTTSTILIGACSRFGSISD 461
Query: 266 ARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYDQI 305
A F M G++ VTYN+LM +++ +++ I
Sbjct: 462 AESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELI 501
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ +I GY LG + A + + K+G PP++ + T L+ A + G ++AE++FR M+
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMK 470
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G + VTY ++ + K + +VFE + + + + PD +N++I+ G
Sbjct: 471 TEGLKLDVVTYNNLMHGY---GKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRG 527
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
D+A + + + RG ST+ + ++
Sbjct: 528 YIDEANEIISELIRRGFVPSTLAFTDVI 555
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 77/146 (52%), Gaps = 8/146 (5%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
M++ GY + A ++++ + + G+ P+ ++ T ++ + K G + A ++ M
Sbjct: 523 MVVRGY-----IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADL 577
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
+P VT +L + + + ++A +F LLD + LKPD ++N +I+ Y G
Sbjct: 578 RMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLD---AGLKPDVVLYNTLIHGYCSVGDI 634
Query: 264 DKARKTFALMAERGIEQSTVTYNSLM 289
+KA + LM +RG+ + T+++L+
Sbjct: 635 EKACELIGLMVQRGMLPNESTHHALV 660
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 3/146 (2%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
+LI + G + AE V M G +VV+ +LM YGK + N + M+
Sbjct: 448 ILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSA 507
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
G P TY +++ + V EA E+ L+ + P F +I + K G +
Sbjct: 508 GISPDVATYNILIHSMVVRGYIDEANEIISELI---RRGFVPSTLAFTDVIGGFSKRGDF 564
Query: 264 DKARKTFALMAERGIEQSTVTYNSLM 289
+A + MA+ ++ VT ++L+
Sbjct: 565 QEAFILWFYMADLRMKPDVVTCSALL 590
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 6/160 (3%)
Query: 146 ITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGP 205
I G+ K+G E+ + L++ PN+ +S + G A IF+ + + G
Sbjct: 348 IDGFCKVGK---PEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGL 404
Query: 206 EPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDK 265
P V Y ++ + + +A + F LL KS P ++I + GS
Sbjct: 405 LPDCVCYTTMIDGYCNLGRTDKAFQYFGALL---KSGNPPSLTTSTILIGACSRFGSISD 461
Query: 266 ARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYDQI 305
A F M G++ VTYN+LM +++ +++ I
Sbjct: 462 AESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELI 501
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 5/150 (3%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F L+ G+ + F A ++ + GY PNVV +++++ + G+ N A + + M+
Sbjct: 152 FGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMK 211
Query: 202 KFGPEPSAVTY-QLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKA 260
K G P VTY LI + F G A L D + + PD F+ +I +Y K
Sbjct: 212 KMGIRPDVVTYNSLITRLFHSGTWGVSA----RILSDMMRMGISPDVITFSALIDVYGKE 267
Query: 261 GSYDKARKTFALMAERGIEQSTVTYNSLMS 290
G +A+K + M +R + + VTYNSL++
Sbjct: 268 GQLLEAKKQYNEMIQRSVNPNIVTYNSLIN 297
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LIT G + + ++L+ M + G P+V++ ++L++ YGK G+ A+ + M +
Sbjct: 225 LITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRS 284
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ VTY ++ EA++V L+ P+ +N +I Y KA D
Sbjct: 285 VNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV---SKGFFPNAVTYNTLINGYCKAKRVD 341
Query: 265 KARKTFALMAERGIEQSTVTYNSL 288
K +M+ G++ T TYN+L
Sbjct: 342 DGMKILCVMSRDGVDGDTFTYNTL 365
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI GY K + K+L +M+++G + + +L + Y + G+++ AE + RM G
Sbjct: 330 LINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCG 389
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P T+ ++L K +A E D +KS +N++I KA +
Sbjct: 390 VHPDMYTFNILLDGLCDHGKIGKALVRLE---DLQKSKTVVGIITYNIIIKGLCKADKVE 446
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
A F +A +G+ +TY ++M
Sbjct: 447 DAWYLFCSLALKGVSPDVITYITMM 471
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+DF L+ KL + + + G ++ S T+L++ + + R + A + +
Sbjct: 80 VDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGK 139
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M K G EPS VT+ ++ F ++F EA + + ++ +P+ ++N +I +
Sbjct: 140 MMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVG---LGYEPNVVIYNTIIDSLCE 196
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
G + A M + GI VTYNSL++
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLIT 227
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 69/148 (46%), Gaps = 3/148 (2%)
Query: 153 GDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTY 212
G N A VL M K G P+VV+ SL+ G + + I M + G P +T+
Sbjct: 198 GQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITF 257
Query: 213 QLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFAL 272
++ + + + EA++ + ++ + + P+ +N +I G D+A+K +
Sbjct: 258 SALIDVYGKEGQLLEAKKQYNEMI---QRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNV 314
Query: 273 MAERGIEQSTVTYNSLMSFETNYKEVSN 300
+ +G + VTYN+L++ K V +
Sbjct: 315 LVSKGFFPNAVTYNTLINGYCKAKRVDD 342
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G G + A+KVL ++ G+ PN V+ +L+ Y K R ++ I M + G
Sbjct: 295 LINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDG 354
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+ TY + + + Q KF AE+V ++ + PD FN+++ G
Sbjct: 355 VDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMV---SCGVHPDMYTFNILLDGLCDHGKIG 411
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
KA + + +TYN ++
Sbjct: 412 KALVRLEDLQKSKTVVGIITYNIII 436
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 10/219 (4%)
Query: 83 QAGSAVSVLSDEKLKNQTIPKDLVI--GTLVRFKQLKKWNLVIEIL-EWLRNQSWWDFGK 139
Q +A+ VL + +K I D+V + R W + IL + +R D
Sbjct: 199 QVNTALDVL--KHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDV-- 254
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+ F LI YGK G A+K M + PN+V+ SL+ G + A+ +
Sbjct: 255 ITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNV 314
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
+ G P+AVTY ++ + + + + ++ + + + D +N + Y +
Sbjct: 315 LVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVM---SRDGVDGDTFTYNTLYQGYCQ 371
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEV 298
AG + A K M G+ T+N L+ ++ ++
Sbjct: 372 AGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKI 410
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 72/132 (54%), Gaps = 3/132 (2%)
Query: 158 AEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILK 217
A ++L+ M + PNVV+ +L++A+ K G+ AE ++ M K +P TY ++
Sbjct: 314 ASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 373
Query: 218 TFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERG 277
F D+ EA+ +FE ++ + P+ +N +I + KA D+ + F M++RG
Sbjct: 374 GFCMHDRLDEAKHMFELMISKD---CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG 430
Query: 278 IEQSTVTYNSLM 289
+ +TVTY +L+
Sbjct: 431 LVGNTVTYTTLI 442
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 76/146 (52%), Gaps = 3/146 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G+ K + ++ M++ G N V+ T+L+ + + +NA+ +F++M G
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ +TY +L + K ++A VFE L ++S ++P +N+MI KAG +
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL---QRSKMEPTIYTYNIMIEGMCKAGKVE 522
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
F ++ +G++ + YN+++S
Sbjct: 523 DGWDLFCSLSLKGVKPDVIIYNTMIS 548
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 98/206 (47%), Gaps = 9/206 (4%)
Query: 73 NWWKLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVR-FKQLKKWNLVIEILEWLRN 131
N + + +++D+A ++ + P + TL+ F + K+ + +E+ + +
Sbjct: 373 NGFCMHDRLDEAKHMFELM----ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM-S 427
Query: 132 QSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYN 191
Q + + LI G+ + D + A+ V M +G PN+++ +L++ K G+
Sbjct: 428 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 487
Query: 192 NAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFN 251
A +F +Q+ EP+ TY ++++ + K ++ ++F +L +KPD ++N
Sbjct: 488 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL---SLKGVKPDVIIYN 544
Query: 252 MMIYMYKKAGSYDKARKTFALMAERG 277
MI + + G ++A F M E G
Sbjct: 545 TMISGFCRKGLKEEADALFRKMREDG 570
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Query: 165 MNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDK 224
M G PNV++ +SL+ R+++A + M + P+ VT+ ++ FV+ K
Sbjct: 286 MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK 345
Query: 225 FKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVT 284
EAE++++ ++ K + PD ++ +I + D+A+ F LM + + VT
Sbjct: 346 LVEAEKLYDEMI---KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 402
Query: 285 YNSLMS 290
YN+L++
Sbjct: 403 YNTLIN 408
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 88/188 (46%), Gaps = 4/188 (2%)
Query: 110 LVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNG 169
L ++KK++LVI + E ++ + + +LI + + + A +L M K G
Sbjct: 92 LSAIAKMKKFDLVISLGEKMQ-RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 150
Query: 170 YPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAE 229
Y P++V+ +SL+ Y G R ++A A+ +M + G P +T+ ++ +K EA
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 230 EVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+ + ++ + +P+ + +++ K G D A M IE + V Y++++
Sbjct: 211 ALVDRMV---QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 290 SFETNYKE 297
Y+
Sbjct: 268 DSLCKYRH 275
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F LI + K G AEK+ M K P++ + +SL+ + R + A+ +F M
Sbjct: 333 FNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 392
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
P+ VTY ++ F + + E E+F + + L + + +I+ + +A
Sbjct: 393 SKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM---SQRGLVGNTVTYTTLIHGFFQAR 449
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
D A+ F M G+ + +TYN+L+
Sbjct: 450 DCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 73/147 (49%), Gaps = 3/147 (2%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
+++ G K GD + A +L M NVV ++++++ K ++A +F M+
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
G P+ +TY ++ +++ +A + +++ + + P+ FN +I + K G
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK---INPNVVTFNALIDAFVKEGKL 346
Query: 264 DKARKTFALMAERGIEQSTVTYNSLMS 290
+A K + M +R I+ TY+SL++
Sbjct: 347 VEAEKLYDEMIKRSIDPDIFTYSSLIN 373
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 81/146 (55%), Gaps = 3/146 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
+ + + +L ++ A++ L M + G + VS T+L++ Y K G A+ +F M G
Sbjct: 440 IASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKG 499
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+P+A+TY +++ + + K KEA ++ + E + + PD + +I+ A + D
Sbjct: 500 VQPNAITYNVMIYAYCKQGKIKEARKLRANM---EANGMDPDSYTYTSLIHGECIADNVD 556
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
+A + F+ M +G++Q++VTY ++S
Sbjct: 557 EAMRLFSEMGLKGLDQNSVTYTVMIS 582
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F LI GY + G + A + +M + G+ +V + ++ + + RY+ A+ RM
Sbjct: 402 FNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM 461
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ G + S V+Y ++ + + +EA+ +F ++ ++P+ +N+MIY Y K G
Sbjct: 462 EGGVKLSTVSYTNLIDVYCKEGNVEEAKRLF---VEMSSKGVQPNAITYNVMIYAYCKQG 518
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFET 293
+ARK A M G++ + TY SL+ E
Sbjct: 519 KIKEARKLRANMEANGMDPDSYTYTSLIHGEC 550
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 6/162 (3%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
+I Y K DF+G E VL +M K+G N V+ T LME K G+ ++AE +F M++ G
Sbjct: 265 IINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERG 324
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
E Y ++ + K A +F+ L + L P + +I K G
Sbjct: 325 IESDVHVYTSLISWNCRKGNMKRAFLLFDELTE---KGLSPSSYTYGALIDGVCKVGEMG 381
Query: 265 KARKTFALMAERGIEQSTVTYNSLMSFETN---YKEVSNIYD 303
A M +G+ + V +N+L+ E S IYD
Sbjct: 382 AAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYD 423
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 95/193 (49%), Gaps = 4/193 (2%)
Query: 97 KNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFN 156
K +I + I LV K+ ++ +L +EI + + S +++ G + G+
Sbjct: 183 KGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD-SGVKITVYSLTIVVEGLCRRGEVE 241
Query: 157 GAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLIL 216
++K++ + G P + +++ AY K ++ E + + M+K G + VTY L++
Sbjct: 242 KSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLM 301
Query: 217 KTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAER 276
+ V+ K +AE++F+ + + ++ D ++ +I + G+ +A F + E+
Sbjct: 302 ELSVKNGKMSDAEKLFDEM---RERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEK 358
Query: 277 GIEQSTVTYNSLM 289
G+ S+ TY +L+
Sbjct: 359 GLSPSSYTYGALI 371
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 8/179 (4%)
Query: 113 FKQLKKWNLVIEILEWLRN--QSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGY 170
F +LK+++ E +WL + + + LI Y K G+ A+++ M+ G
Sbjct: 444 FNRLKRYD---EAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGV 500
Query: 171 PPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEE 230
PN ++ ++ AY K G+ A + M+ G +P + TY ++ D EA
Sbjct: 501 QPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMR 560
Query: 231 VFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+F + L + + +MI KAG D+A + M +G Y +L+
Sbjct: 561 LFSEM---GLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 94/191 (49%), Gaps = 6/191 (3%)
Query: 101 IPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGK--MDFIMLITGYGKLGDFNGA 158
I +D+V+ T++ L K LV+ LE L+ + + LITG K G A
Sbjct: 44 IKRDVVVDTIL-IDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADA 102
Query: 159 EKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKT 218
E+ L M+ PNV++ ++L++AY K G+ + +++++ M + +P+ TY ++
Sbjct: 103 ERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYG 162
Query: 219 FVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGI 278
++ EA ++ + ++ P+ ++ + + K+ D K M +RG+
Sbjct: 163 LCMHNRVDEAIKMLDLMI---SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGV 219
Query: 279 EQSTVTYNSLM 289
+TV+ N+L+
Sbjct: 220 AANTVSCNTLI 230
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ G+ A V M K G +VV T L++ K A + +RM+ G
Sbjct: 19 LVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRG 78
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ VTY ++ + + +AE +D +K + P+ F+ +I Y K G
Sbjct: 79 ISPNVVTYSSLITGLCKSGRLADAERRLHE-MDSKK--INPNVITFSALIDAYAKRGKLS 135
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
K + +M + I+ + TY+SL+
Sbjct: 136 KVDSVYKMMIQMSIDPNVFTYSSLI 160
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI GY + G + A V M NG PN+ S ++ G A + F MQK
Sbjct: 229 LIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTR 288
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ +TY +++ + KEA ++F L + ++PD K + +MI +AG
Sbjct: 289 NDLDIITYTIMIHGMCKACMVKEAYDLFYKL---KFKRVEPDFKAYTIMIAELNRAG 342
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 120 NLVIEILEWLRNQSWWDFGKM--------DFIMLITGYGKLGDFNGAEKVLALMNKNGYP 171
N +E +W++ +S + + + + +LI K +F A L M K G+
Sbjct: 122 NAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFK 181
Query: 172 PNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEV 231
P+V S ++++ K G+ ++A +F M + G P Y +++ F++ K A E+
Sbjct: 182 PDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMEL 241
Query: 232 FETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
++ LL+D S + P+ K N+MI K G D K + M + E+ TY+SL+
Sbjct: 242 WDRLLED--SSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLI 297
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 65/145 (44%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G + A L M KNG P VVS L+ K G++ A A + M + G
Sbjct: 470 LIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENG 529
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+P TY ++L + K A E++ L +S L+ D M N++I+ G D
Sbjct: 530 WKPDLKTYSILLCGLCRDRKIDLALELWHQFL---QSGLETDVMMHNILIHGLCSVGKLD 586
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
A A M R + VTYN+LM
Sbjct: 587 DAMTVMANMEHRNCTANLVTYNTLM 611
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 63/113 (55%), Gaps = 4/113 (3%)
Query: 179 SLMEAYGKGGRYNNAEAIFRRMQK-FGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLD 237
S+++ YGK + A +F+RM++ FG EP+ +Y +L FV+ ++ + E +F
Sbjct: 83 SVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYF-- 140
Query: 238 DEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
E + + P+ + +N++I M K ++KAR M + G + +Y+++++
Sbjct: 141 -ETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVIN 192
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 33/181 (18%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ ++ GY GD A++VL M G+ P+ + T LM+ Y K GR++ A + M+
Sbjct: 229 YTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDME 288
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLD-----------------------D 238
K EP+ VTY ++++ + K EA +F+ +L+ D
Sbjct: 289 KNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVD 348
Query: 239 E---------KSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
E K+ PD + + +I+ K G +ARK F E+G S +TYN+L+
Sbjct: 349 EACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLI 407
Query: 290 S 290
+
Sbjct: 408 A 408
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 3/134 (2%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
+L+ K D A KVL + G PN+V+ T+++ Y G +A+ + M
Sbjct: 196 LLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDR 255
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
G P A TY +++ + + +F EA V + D EK+ ++P++ + +MI K
Sbjct: 256 GWYPDATTYTVLMDGYCKLGRFSEAATVMD---DMEKNEIEPNEVTYGVMIRALCKEKKS 312
Query: 264 DKARKTFALMAERG 277
+AR F M ER
Sbjct: 313 GEARNMFDEMLERS 326
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 6/142 (4%)
Query: 169 GYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEA 228
G PN+ + L++A K +A + + G P+ VTY IL +V + A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 229 EEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSL 288
+ V E +LD PD + +++ Y K G + +A M + IE + VTY +
Sbjct: 246 KRVLEEMLD---RGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVM 302
Query: 289 ---MSFETNYKEVSNIYDQILK 307
+ E E N++D++L+
Sbjct: 303 IRALCKEKKSGEARNMFDEMLE 324
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 155 FNGAEKVLALMNKNGYPPNVVSQT---SLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVT 211
F+ E ++A + +N YPP + L+ YG GRY ++ IF R+ FG + S +
Sbjct: 99 FDPVESLMADL-RNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRS 157
Query: 212 YQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFA 271
+L +Q +F +F+ E + P+ N+++ K + A K
Sbjct: 158 LNTLLNVLIQNQRFDLVHAMFKN--SKESFGITPNIFTCNLLVKALCKKNDIESAYKVLD 215
Query: 272 LMAERGIEQSTVTYNSLM 289
+ G+ + VTY +++
Sbjct: 216 EIPSMGLVPNLVTYTTIL 233
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 81/165 (49%), Gaps = 4/165 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F L+ GK G + + KV M G+ P+ SL+++Y K G+ + A ++ M+
Sbjct: 351 FSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMK 410
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
K G P+ Y +I+++ + K + A VF+ D EK+ P ++ ++ M+ +G
Sbjct: 411 KSGFRPNFGLYTMIIESHAKSGKLEVAMTVFK---DMEKAGFLPTPSTYSCLLEMHAGSG 467
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYDQIL 306
D A K + M G+ +Y SL++ N K + ++ +IL
Sbjct: 468 QVDSAMKIYNSMTNAGLRPGLSSYISLLTLLAN-KRLVDVAGKIL 511
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 76/157 (48%), Gaps = 3/157 (1%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
++I K G + A K+ M + P+ +SL+++ GK GR + + ++ MQ F
Sbjct: 318 LIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGF 377
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
G PSA + ++ ++ + K A +++ + +KS +P+ ++ M+I + K+G
Sbjct: 378 GHRPSATMFVSLIDSYAKAGKLDTALRLWDEM---KKSGFRPNFGLYTMIIESHAKSGKL 434
Query: 264 DKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSN 300
+ A F M + G + TY+ L+ +V +
Sbjct: 435 EVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDS 471
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 67/150 (44%), Gaps = 3/150 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F+ LI Y K G + A ++ M K+G+ PN T ++E++ K G+ A +F+ M+
Sbjct: 386 FVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDME 445
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
K G P+ TY +L+ + A +++ ++ + + L+P + ++ +
Sbjct: 446 KAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTN---AGLRPGLSSYISLLTLLANKR 502
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSF 291
D A K M G + LM +
Sbjct: 503 LVDVAGKILLEMKAMGYSVDVCASDVLMIY 532
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 81/180 (45%), Gaps = 6/180 (3%)
Query: 113 FKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPP 172
K +K+ + + + W + Q W+ +++L G + DF G + + M ++
Sbjct: 179 LKIVKEVDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSH 238
Query: 173 NVVSQTS---LMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAE 229
+S + +++ K + A F++ Q+ G + TY ++ F+ +A
Sbjct: 239 GDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAF 298
Query: 230 EVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
E++E++ EK+ D + ++I K+G D A K F M ER + S ++SL+
Sbjct: 299 EIYESM---EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLV 355
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 77/183 (42%), Gaps = 38/183 (20%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F LI GY K GD A + M + NVV+ T+L++ + K G AE ++ RM
Sbjct: 201 FTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMV 260
Query: 202 KFGPEPSAVTYQLILKTFVQ-GD----------------------------------KFK 226
+ EP+++ Y I+ F Q GD K K
Sbjct: 261 EDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLK 320
Query: 227 EAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYN 286
EA E+ E D EKS L PD +F M+ Y K+G A + + ERG E V +
Sbjct: 321 EATEIVE---DMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALS 377
Query: 287 SLM 289
+++
Sbjct: 378 TMI 380
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
Query: 146 ITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGP 205
I + K G+ A K M ++ PNVV+ T L++ Y K G A ++++ M++
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRM 229
Query: 206 EPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDK 265
+ VTY ++ F + + + AEE++ +++D ++P+ ++ +I + + G D
Sbjct: 230 SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDR---VEPNSLVYTTIIDGFFQRGDSDN 286
Query: 266 ARKTFALMAERGIEQSTVTYNSLMS 290
A K A M +G+ Y ++S
Sbjct: 287 AMKFLAKMLNQGMRLDITAYGVIIS 311
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ +LI K GDF E++ + +++ G P+ TS + K G +A + RM
Sbjct: 406 YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMV 465
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ G + Y ++ EA +VF+ +L+ S + PD +F+++I Y+K G
Sbjct: 466 QEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLN---SGISPDSAVFDLLIRAYEKEG 522
Query: 262 SYDKARKTFALMAERGI 278
+ A M RG+
Sbjct: 523 NMAAASDLLLDMQRRGL 539
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 3/149 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F LI G+ K G + A +L M + ++V ++++GK G+ + A F ++
Sbjct: 206 FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIE 265
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G +P VTY ++ + ++ EA E+FE L EK+ P +N MI Y AG
Sbjct: 266 ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL---EKNRRVPCTYAYNTMIMGYGSAG 322
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMS 290
+D+A +G S + YN +++
Sbjct: 323 KFDEAYSLLERQRAKGSIPSVIAYNCILT 351
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 3/150 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G+GK+G + A +L + + G PN+ + SL++A K N A F+ M++
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ VTY +++ + KF +A ++ + +K +KP + MI KAG+
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEM---QKQGMKPSTISYTTMISGLAKAGNIA 779
Query: 265 KARKTFALMAERGIEQSTVTYNSLMSFETN 294
+A F G + YN+++ +N
Sbjct: 780 EAGALFDRFKANGGVPDSACYNAMIEGLSN 809
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 26/219 (11%)
Query: 75 WKLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWL----R 130
WK +I+ G LK + +IG L + +L + +E+ E L R
Sbjct: 258 WKFFHEIEANG----------LKPDEVTYTSMIGVLCKANRLDE---AVEMFEHLEKNRR 304
Query: 131 NQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRY 190
+ + M I GYG G F+ A +L G P+V++ ++ K G+
Sbjct: 305 VPCTYAYNTM-----IMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKV 359
Query: 191 NNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMF 250
+ A +F M+K P+ TY +++ + K A E+ +++ +K+ L P+ +
Sbjct: 360 DEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSM---QKAGLFPNVRTV 415
Query: 251 NMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
N+M+ K+ D+A F M + +T+ SL+
Sbjct: 416 NIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLI 454
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 87/199 (43%), Gaps = 41/199 (20%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPP------------------------------- 172
++I G+ K G N A ++L M G+ P
Sbjct: 592 IVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 651
Query: 173 ----NVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEA 228
NVV +SL++ +GK GR + A I + + G P+ T+ +L V+ ++ EA
Sbjct: 652 RIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEA 711
Query: 229 EEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSL 288
F+++ ++ P+Q + ++I K ++KA + M ++G++ ST++Y ++
Sbjct: 712 LVCFQSM---KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768
Query: 289 MSF---ETNYKEVSNIYDQ 304
+S N E ++D+
Sbjct: 769 ISGLAKAGNIAEAGALFDR 787
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 99/240 (41%), Gaps = 46/240 (19%)
Query: 86 SAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIML 145
SA + LS K Q + VIG L ++LK N IE W ++ + L
Sbjct: 51 SAENTLSALSFKPQ---PEFVIGVL---RRLKDVNRAIEYFRWYERRTELPHCPESYNSL 104
Query: 146 ITGYGKLGDFNGAEKVLALMNKNGYPPNV----------VSQTSLMEAY----------- 184
+ + +F+ +++L M+ G+ P+V V L E Y
Sbjct: 105 LLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKF 164
Query: 185 -----------GKGGRYNNAE---AIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEE 230
G N+++ +F++MQ+ G EP+ + +++ F + + A
Sbjct: 165 RPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSA-- 222
Query: 231 VFETLLDDEK-SPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+LLD+ K S L D ++N+ I + K G D A K F + G++ VTY S++
Sbjct: 223 --LSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMI 280
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 85/194 (43%), Gaps = 6/194 (3%)
Query: 97 KNQTIPKDLVIGTLVR-FKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDF 155
KN+ +P T++ + K++ +LE R + + + ++T K+G
Sbjct: 301 KNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP-SVIAYNCILTCLRKMGKV 359
Query: 156 NGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLI 215
+ A KV M K+ PN+ + L++ + G+ + A + MQK G P+ T ++
Sbjct: 360 DEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIM 418
Query: 216 LKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAE 275
+ + K EA +FE + + PD+ F +I K G D A K + M +
Sbjct: 419 VDRLCKSQKLDEACAMFEEM---DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLD 475
Query: 276 RGIEQSTVTYNSLM 289
+++ Y SL+
Sbjct: 476 SDCRTNSIVYTSLI 489
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 76/158 (48%), Gaps = 3/158 (1%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ +LI G K G N ++ M + G + + +++ + K G+ N A + M+
Sbjct: 555 YSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK 614
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G EP+ VTY ++ + D+ EA +FE + + ++ + +++ +I + K G
Sbjct: 615 TKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFE---EAKSKRIELNVVIYSSLIDGFGKVG 671
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVS 299
D+A + ++G+ + T+NSL+ +E++
Sbjct: 672 RIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEIN 709
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 14/159 (8%)
Query: 75 WKLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSW 134
+ ++E++ Q G ++ + L + + + + LV F+ +K+ L+ NQ
Sbjct: 677 YLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKE-------LKCTPNQVT 729
Query: 135 WDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAE 194
+ +LI G K+ FN A M K G P+ +S T+++ K G A
Sbjct: 730 YG-------ILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782
Query: 195 AIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFE 233
A+F R + G P + Y +++ G++ +A +FE
Sbjct: 783 ALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 95/219 (43%), Gaps = 9/219 (4%)
Query: 73 NWWKLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKK-WNLVIEILEWLRN 131
N W L+++ +A + + + + + ++ R Q++ W +E+
Sbjct: 203 NGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEM-----K 257
Query: 132 QSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYN 191
+ + + + ++ G+G G+ A V M + G P+V + ++++ K
Sbjct: 258 KRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVE 317
Query: 192 NAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFN 251
NA +F M + G EP+ TY ++++ +F EE+ + + E +P+ + +N
Sbjct: 318 NAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRM---ENEGCEPNFQTYN 374
Query: 252 MMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
MMI Y + +KA F M + TYN L+S
Sbjct: 375 MMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILIS 413
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 6/203 (2%)
Query: 89 SVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITG 148
S++ +K + +P+ ++ R L+ W I++ E LR Q W+ ++ LI
Sbjct: 101 SIIEKKKGSKKLLPRTVLESLHERITALR-WESAIQVFELLREQLWYKPNVGIYVKLIVM 159
Query: 149 YGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ-KFGPEP 207
GK A ++ M G N T+L+ AY + GR++ A + RM+ +P
Sbjct: 160 LGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQP 219
Query: 208 SAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKAR 267
TY +++K+F+Q F + +++ L D + ++P+ +N +I Y KA + +
Sbjct: 220 DVHTYSILIKSFLQVFAFDKVQDL---LSDMRRQGIRPNTITYNTLIDAYGKAKMFVEME 276
Query: 268 KTF-ALMAERGIEQSTVTYNSLM 289
T ++ E + + T NS +
Sbjct: 277 STLIQMLGEDDCKPDSWTMNSTL 299
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 81/170 (47%), Gaps = 9/170 (5%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F +L+ YGK G++ V+ M K Y +V+ +++A+G+ G E +FR MQ
Sbjct: 330 FNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQ 389
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
PS VT +++ + + K A+++ L E S ++ D FN ++ Y +
Sbjct: 390 SERIFPSCVTLCSLVRAYGRASK---ADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRME 446
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM------SFETNYKEVSNIYDQI 305
+ + + LM ++G + +TY +++ T+ KE+ + + +
Sbjct: 447 KFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKELHGVVESV 496
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 3/144 (2%)
Query: 146 ITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGP 205
+ +G G E +G PN+ + L+++YGK G Y A+ MQK+
Sbjct: 299 LRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHY 358
Query: 206 EPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDK 265
+ VTY +++ F + K+ E +F L+ E+ + P ++ Y +A DK
Sbjct: 359 SWTIVTYNVVIDAFGRAGDLKQMEYLFR-LMQSER--IFPSCVTLCSLVRAYGRASKADK 415
Query: 266 ARKTFALMAERGIEQSTVTYNSLM 289
+ I V +N L+
Sbjct: 416 IGGVLRFIENSDIRLDLVFFNCLV 439
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 6/206 (2%)
Query: 86 SAVSVLSDEKLKNQTIPKDLVIGTLVR-FKQLKKWNLVIEILEWLRNQSWWDFGKMDFIM 144
+A ++L K + P L++ F Q+ ++ V ++L +R Q + +
Sbjct: 203 AAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRP-NTITYNT 261
Query: 145 LITGYGKLGDFNGAEKVLA-LMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
LI YGK F E L ++ ++ P+ + S + A+G G+ E + + Q
Sbjct: 262 LIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSS 321
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
G EP+ T+ ++L ++ + +K+ V E + +K +N++I + +AG
Sbjct: 322 GIEPNIRTFNILLDSYGKSGNYKKMSAVMEYM---QKYHYSWTIVTYNVVIDAFGRAGDL 378
Query: 264 DKARKTFALMAERGIEQSTVTYNSLM 289
+ F LM I S VT SL+
Sbjct: 379 KQMEYLFRLMQSERIFPSCVTLCSLV 404
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 14/170 (8%)
Query: 129 LRNQSWWDFGKM----------DFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQT 178
L N++ W F KM +F LI G K G A ++L M +NG+ PNV + T
Sbjct: 267 LVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHT 326
Query: 179 SLMEAYGKGGRYNNAEAIFRRMQKFGP-EPSAVTYQLILKTFVQGDKFKEAEEVFETLLD 237
+L++ K G A +F ++ + +P+ TY ++ + + DK AE +F +
Sbjct: 327 ALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRM-- 384
Query: 238 DEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNS 287
++ L P+ + +I + KAGS+ +A + LM + G + TYN+
Sbjct: 385 -KEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNA 433
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 73/184 (39%), Gaps = 38/184 (20%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNV--------------------------- 174
+ LI G+ K G F A +++ LM G+ PN+
Sbjct: 396 YTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAF 455
Query: 175 --------VSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFK 226
V+ T L++ K N A A F RM K G E +++ F + K K
Sbjct: 456 SCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMK 515
Query: 227 EAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYN 286
E+E +F+ ++ L P ++ + MI Y K G D A K F M G + TY
Sbjct: 516 ESERLFQLVVS---LGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYG 572
Query: 287 SLMS 290
SL+S
Sbjct: 573 SLIS 576
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 14/168 (8%)
Query: 127 EWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKV-LALMNKNGYPPNVVSQTSLMEAYG 185
E +RN W LI G K G A ++ L L+ + Y PNV + TS++ Y
Sbjct: 312 EMVRNG--WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYC 369
Query: 186 KGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKP 245
K + N AE +F RM++ G P+ TY ++ + F A E+ L+ DE P
Sbjct: 370 KEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMN-LMGDEG--FMP 426
Query: 246 DQKMFNMMI-YMYKKA---GSYDKARKTFALMAERGIEQSTVTYNSLM 289
+ +N I + KK+ +Y+ K F+ G+E VTY L+
Sbjct: 427 NIYTYNAAIDSLCKKSRAPEAYELLNKAFSC----GLEADGVTYTILI 470
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 3/149 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ +I GY K N AE + + M + G PNV + T+L+ + K G + A + M
Sbjct: 361 YTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMG 420
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G P+ TY + + + + A E +E L L+ D + ++I K
Sbjct: 421 DEGFMPNIYTYNAAIDSLCKKSR---APEAYELLNKAFSCGLEADGVTYTILIQEQCKQN 477
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMS 290
++A F M + G E N L++
Sbjct: 478 DINQALAFFCRMNKTGFEADMRLNNILIA 506
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 10/146 (6%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI+GY KLGD AEK+ M + N VS T+L+ Y + G N A +FR+M G
Sbjct: 251 LISGYAKLGDMEAAEKLFCEMPEK----NPVSWTALIAGYVRQGSGNRALDLFRKMIALG 306
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+P T+ L + +E+ ++ ++ ++P+ + + +I MY K+GS +
Sbjct: 307 VKPEQFTFSSCLCASASIASLRHGKEIHGYMI---RTNVRPNAIVISSLIDMYSKSGSLE 363
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
+ + F + ++ V +N+++S
Sbjct: 364 ASERVFRICDDK---HDCVFWNTMIS 386
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 7/209 (3%)
Query: 79 EQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFG 138
+Q DQA V+ E LK TI D+ + + + + + LE++++ S
Sbjct: 158 KQPDQASLLFEVMLSEGLK-PTI--DVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPD 214
Query: 139 KMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFR 198
F +LI+ KLG F+ + ++ M+ G + V+ ++++ YGK G + E++
Sbjct: 215 VFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLA 274
Query: 199 RMQKFGPE-PSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMY 257
M + G P T I+ ++ G ++ E + + ++PD FN++I +
Sbjct: 275 DMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRF---QLMGVQPDITTFNILILSF 331
Query: 258 KKAGSYDKARKTFALMAERGIEQSTVTYN 286
KAG Y K M +R +TVTYN
Sbjct: 332 GKAGMYKKMCSVMDFMEKRFFSLTTVTYN 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F +LI +GK G + V+ M K + V+ ++E +GK GR + +FR+M+
Sbjct: 324 FNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMK 383
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G +P+++TY ++ + + + + V +++ S + D FN +I Y +AG
Sbjct: 384 YQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVN---SDVVLDTPFFNCIINAYGQAG 440
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYDQI 305
++ + M ER + +T+ +++ T + I+D +
Sbjct: 441 DLATMKELYIQMEERKCKPDKITFATMIKTYTAH----GIFDAV 480
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 32/180 (17%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ ++I G K G + A + M G+ +++ T+L+ + GR+++ + R M
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSP------------------- 242
K P V + ++ FV+ K +EAEE+ + ++ SP
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 243 -------------LKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
P+ + FN++I Y KA D + F M+ RG+ TVTYN+L+
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 11/177 (6%)
Query: 118 KWNLVIEILEWLRNQSWWDF--GKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVV 175
K NL+ + LE R S + + LI G+ +LG A+++ M P++V
Sbjct: 399 KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIV 458
Query: 176 SQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETL 235
S L++ G A IF +++K E Y +I+ K +A ++F +L
Sbjct: 459 SYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 518
Query: 236 LDDEKSPL---KPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
PL KPD K +N+MI K GS +A F M E G + TYN L+
Sbjct: 519 ------PLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G+ K + A +L LM G PN+ + L+ Y K ++ +FR+M G
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
VTY +++ F + K + A+E+F+ ++ ++PD + +++ G +
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMV---SRRVRPDIVSYKILLDGLCDNGEPE 474
Query: 265 KARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYD 303
KA + F + + +E YN ++ N +V + +D
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 513
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F LI G G + A +++ M + G+ P +++ +L+ G+ ++A + RM
Sbjct: 145 FSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV 204
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ G +P+ VTY +LK + + A E+ + E+ +K D ++++I K G
Sbjct: 205 ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM---EERKIKLDAVKYSIIIDGLCKDG 261
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
S D A F M +G + + Y +L+
Sbjct: 262 SLDNAFNLFNEMEIKGFKADIIIYTTLI 289
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 74/146 (50%), Gaps = 3/146 (2%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
+L+ + + G + + ++ + P+V + +M+AYGK G EA+ RM+
Sbjct: 213 ILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSN 272
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
+P +T+ +++ ++ + +F++ E+ F++L+ ++ P P FN MI Y KA
Sbjct: 273 ECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLP---TFNSMIINYGKARMI 329
Query: 264 DKARKTFALMAERGIEQSTVTYNSLM 289
DKA F M + S +TY ++
Sbjct: 330 DKAEWVFKKMNDMNYIPSFITYECMI 355
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 103/260 (39%), Gaps = 19/260 (7%)
Query: 35 RRRRLEVVCKGMLTPRKFMQRRRKNTVFKDAADEAEKKNWWKLMEQIDQAGSAVSVLSDE 94
R R + C + + RK +R ++A+ + LM +I V L D+
Sbjct: 40 RSTRTRITCGAISSRRKLAER--------ESAERENRVLVRSLMSRISDREPLVKTL-DK 90
Query: 95 KLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGD 154
+K + D + KW +E+ W++ Q W+ + LI+ GK G
Sbjct: 91 YVK--VVRCDHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQ 148
Query: 155 FNGAEKVLALMNKNGYPPNVVSQTSLMEAY----GKGGRYNNAEAIFRRMQKFG-PEPSA 209
A + + M +G P+ +L+ A+ K +M+ +P+
Sbjct: 149 TRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNV 208
Query: 210 VTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKT 269
VTY ++L+ F Q K + +F+ L + SP+ PD FN ++ Y K G +
Sbjct: 209 VTYNILLRAFAQSGKVDQVNALFKDL---DMSPVSPDVYTFNGVMDAYGKNGMIKEMEAV 265
Query: 270 FALMAERGIEQSTVTYNSLM 289
M + +T+N L+
Sbjct: 266 LTRMRSNECKPDIITFNVLI 285
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F ++ YGK G E VL M N P++++ L+++YGK + E F+ +
Sbjct: 246 FNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLM 305
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ +P+ T+ ++ + + +AE VF+ + D P + MI MY G
Sbjct: 306 RSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMND---MNYIPSFITYECMIMMYGYCG 362
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
S +AR+ F + E T N+++
Sbjct: 363 SVSRAREIFEEVGESDRVLKASTLNAML 390
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 3/147 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F +LI YGK +F E+ + ++ P + + S++ YGK + AE +F++M
Sbjct: 281 FNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMN 340
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
PS +TY+ ++ + A E+FE + + ++ LK N M+ +Y + G
Sbjct: 341 DMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRV-LKAST--LNAMLEVYCRNG 397
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSL 288
Y +A K F + + TY L
Sbjct: 398 LYIEADKLFHNASAFRVHPDASTYKFL 424
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 79/148 (53%), Gaps = 6/148 (4%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
I + YG+ D A ++L+ M + PNVV+ +L++A+ K G+ AE + M
Sbjct: 299 LINCLCNYGRWSD---ASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ +P +TY L++ F ++ EA+++F+ ++ + P+ + +N +I + K
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD---CLPNIQTYNTLINGFCKCK 412
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
+ + F M++RG+ +TVTY +++
Sbjct: 413 RVEDGVELFREMSQRGLVGNTVTYTTII 440
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Query: 165 MNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDK 224
M G PNVV+ SL+ GR+++A + M + P+ VT+ ++ F + K
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK 343
Query: 225 FKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVT 284
EAE++ E ++ + + PD +N++I + D+A++ F M + + T
Sbjct: 344 LVEAEKLHEEMI---QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQT 400
Query: 285 YNSLMSFETNYKEVSN 300
YN+L++ K V +
Sbjct: 401 YNTLINGFCKCKRVED 416
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 99/227 (43%), Gaps = 6/227 (2%)
Query: 78 MEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVR-FKQLKKWNLVIEILEWLRNQSWWD 136
+ I + AV + D +K++ P + L+ ++ K+ LVI + E ++
Sbjct: 58 LSDIIKVDDAVDLFGD-MVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI-S 115
Query: 137 FGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAI 196
+ + I + + + A VLA M K GY P++V+ +SL+ Y R ++A A+
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 197 FRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYM 256
+M + G +P T+ ++ +K EA + + ++ + +PD + ++
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV---QRGCQPDLVTYGTVVNG 232
Query: 257 YKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYD 303
K G D A M I+ + V +N+++ Y+ V D
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVD 279
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 3/146 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
++ G K GD + A +L M NVV +++++ K A +F M+ G
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ VTY ++ ++ +A + +L+ + + P+ FN +I + K G
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK---INPNVVTFNALIDAFFKEGKLV 345
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
+A K M +R I+ T+TYN L++
Sbjct: 346 EAEKLHEEMIQRSIDPDTITYNLLIN 371
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ +I G+ + GD + A+ V M N P ++++ + L+ G+ + A IF+ +Q
Sbjct: 436 YTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ 495
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
K E + Y +++ + K EA ++F +L +KPD +N MI
Sbjct: 496 KSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL------SIKPDVVTYNTMISGLCSKR 549
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
+A F M E G ++ TYN+L+
Sbjct: 550 LLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 71/158 (44%), Gaps = 3/158 (1%)
Query: 132 QSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYN 191
Q D + + +LI G+ + A+++ M PN+ + +L+ + K R
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVE 415
Query: 192 NAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFN 251
+ +FR M + G + VTY I++ F Q A+ VF+ ++ + + D ++
Sbjct: 416 DGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR---VPTDIMTYS 472
Query: 252 MMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
++++ G D A F + + +E + YN+++
Sbjct: 473 ILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMI 510
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 91/192 (47%), Gaps = 11/192 (5%)
Query: 119 WNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQT 178
W +EIL+ + + F +L+ + K G+ + A+KV + K P VVS
Sbjct: 225 WGFYMEILD-----AGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFN 279
Query: 179 SLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDD 238
+L+ Y K G + + +M+K P TY ++ + +K A +F+ +
Sbjct: 280 TLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMC-- 337
Query: 239 EKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS-FETNYKE 297
K L P+ +F +I+ + + G D ++++ M +G++ V YN+L++ F N
Sbjct: 338 -KRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDL 396
Query: 298 VS--NIYDQILK 307
V+ NI D +++
Sbjct: 397 VAARNIVDGMIR 408
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 9/203 (4%)
Query: 91 LSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIM---LIT 147
L DE K IP D++ TL+ N I++++ + + D ++ L+
Sbjct: 332 LFDEMCKRGLIPNDVIFTTLI---HGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVN 388
Query: 148 GYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEP 207
G+ K GD A ++ M + G P+ ++ T+L++ + +GG A I + M + G E
Sbjct: 389 GFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIEL 448
Query: 208 SAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKAR 267
V + ++ + + +AE +L ++ +KPD + MM+ + K G
Sbjct: 449 DRVGFSALVCGMCKEGRVIDAERALREML---RAGIKPDDVTYTMMMDAFCKKGDAQTGF 505
Query: 268 KTFALMAERGIEQSTVTYNSLMS 290
K M G S VTYN L++
Sbjct: 506 KLLKEMQSDGHVPSVVTYNVLLN 528
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 3/166 (1%)
Query: 139 KMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFR 198
K+ + LI G+ + GD A ++ M++NG + V ++L+ K GR +AE R
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALR 474
Query: 199 RMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYK 258
M + G +P VTY +++ F K +A+ F+ L + + P +N+++
Sbjct: 475 EMLRAGIKPDDVTYTMMMDAFC---KKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLC 531
Query: 259 KAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYDQ 304
K G A M G+ +TYN+L+ + S Y Q
Sbjct: 532 KLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQ 577
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 76/160 (47%), Gaps = 6/160 (3%)
Query: 131 NQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRY 190
+Q+ + ++ F L+ G K G AE+ L M + G P+ V+ T +M+A+ K G
Sbjct: 442 DQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDA 501
Query: 191 NNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMF 250
+ + MQ G PS VTY ++L + + K A+ + + +L+ + PD +
Sbjct: 502 QTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLN---IGVVPDDITY 558
Query: 251 NMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
N ++ + + + + K + E GI +Y S+++
Sbjct: 559 NTLLEGHHR---HANSSKRYIQKPEIGIVADLASYKSIVN 595
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI K +GA + M K G PN V T+L+ + + G + + +++M G
Sbjct: 316 LINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKG 375
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+P V Y ++ F + A + + ++ + L+PD+ + +I + + G +
Sbjct: 376 LQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI---RRGLRPDKITYTTLIDGFCRGGDVE 432
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
A + M + GIE V +++L+
Sbjct: 433 TALEIRKEMDQNGIELDRVGFSALVC 458
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G G + AE +L +++ G P+V + SL+ YG G A++ M++ G
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 629
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+P+ TY L++ KE E+ E L + LKPD ++N +++ Y G +
Sbjct: 630 IKPTLKTYHLLISLCT-----KEGIELTERLFGE--MSLKPDLLVYNGVLHCYAVHGDME 682
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
KA M E+ I TYNSL+
Sbjct: 683 KAFNLQKQMIEKSIGLDKTTYNSLI 707
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 116/257 (45%), Gaps = 18/257 (7%)
Query: 61 VFKDAADEAEKKNWWK---LMEQIDQAGS---AVSVLSDEKLKNQTIPKDLVIGTLV--- 111
V++ A D K N + L+ + + G A +L E K +P +++ T++
Sbjct: 341 VYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKG-LVPNEVIYNTMIDGY 399
Query: 112 -RFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGY 170
R L + IE +E + + + LI + +LG+ AEK + M G
Sbjct: 400 CRKGDLVGARMKIEAME----KQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGV 455
Query: 171 PPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEE 230
P+V + L+ YG+ ++ I + M+ G P+ V+Y ++ +G K EA+
Sbjct: 456 SPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI 515
Query: 231 VFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
V D E + P +++NM+I G + A + M ++GIE + VTYN+L+
Sbjct: 516 VKR---DMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572
Query: 291 FETNYKEVSNIYDQILK 307
+ ++S D +L+
Sbjct: 573 GLSMTGKLSEAEDLLLE 589
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 38/185 (20%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
+LI GYG+ +F+ +L M NG PNVVS +L+ KG + A+ + R M+
Sbjct: 464 ILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDR 523
Query: 204 GPEPSA-----------------------------------VTYQLILKTFVQGDKFKEA 228
G P VTY ++ K EA
Sbjct: 524 GVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEA 583
Query: 229 EEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSL 288
E++ LL+ + LKPD +N +I Y AG+ + + M GI+ + TY+ L
Sbjct: 584 EDL---LLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLL 640
Query: 289 MSFET 293
+S T
Sbjct: 641 ISLCT 645
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI GY K G+ + KV M + P++++ +L++ K G +AE + + M+ G
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P A T+ ++ + +K + A V+ET +D S +K + ++++ K G +
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYETAVD---SGVKMNAYTCSILLNALCKEGKIE 371
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
KA + +G+ + V YN+++
Sbjct: 372 KAEEILGREMAKGLVPNEVIYNTMI 396
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 9/209 (4%)
Query: 81 IDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLK-KWNLVIEILEWLRNQSWWDFGK 139
I +A L +E + + L++ LV+ KQ + N+ + ILE S + +GK
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
I KL D ++ M + P+V L++ KG R N+AE +F
Sbjct: 185 A-----IQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDE 239
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M PS +TY ++ + + +++ +V E + D ++P FN ++ K
Sbjct: 240 MLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADH---IEPSLITFNTLLKGLFK 296
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSL 288
AG + A M + G T++ L
Sbjct: 297 AGMVEDAENVLKEMKDLGFVPDAFTFSIL 325
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 74/146 (50%), Gaps = 3/146 (2%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
+L+ + + G + + ++ + P+V + +M+AYGK G EA+ RM+
Sbjct: 213 ILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSN 272
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
+P +T+ +++ ++ + +F++ E+ F++L+ ++ P P FN MI Y KA
Sbjct: 273 ECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLP---TFNSMIINYGKARMI 329
Query: 264 DKARKTFALMAERGIEQSTVTYNSLM 289
DKA F M + S +TY ++
Sbjct: 330 DKAEWVFKKMNDMNYIPSFITYECMI 355
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 103/260 (39%), Gaps = 19/260 (7%)
Query: 35 RRRRLEVVCKGMLTPRKFMQRRRKNTVFKDAADEAEKKNWWKLMEQIDQAGSAVSVLSDE 94
R R + C + + RK +R ++A+ + LM +I V L D+
Sbjct: 40 RSTRTRITCGAISSRRKLAER--------ESAERENRVLVRSLMSRISDREPLVKTL-DK 90
Query: 95 KLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGD 154
+K + D + KW +E+ W++ Q W+ + LI+ GK G
Sbjct: 91 YVK--VVRCDHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQ 148
Query: 155 FNGAEKVLALMNKNGYPPNVVSQTSLMEAY----GKGGRYNNAEAIFRRMQKFG-PEPSA 209
A + + M +G P+ +L+ A+ K +M+ +P+
Sbjct: 149 TRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNV 208
Query: 210 VTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKT 269
VTY ++L+ F Q K + +F+ L + SP+ PD FN ++ Y K G +
Sbjct: 209 VTYNILLRAFAQSGKVDQVNALFKDL---DMSPVSPDVYTFNGVMDAYGKNGMIKEMEAV 265
Query: 270 FALMAERGIEQSTVTYNSLM 289
M + +T+N L+
Sbjct: 266 LTRMRSNECKPDIITFNVLI 285
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F ++ YGK G E VL M N P++++ L+++YGK + E F+ +
Sbjct: 246 FNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLM 305
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ +P+ T+ ++ + + +AE VF+ + D P + MI MY G
Sbjct: 306 RSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMN---YIPSFITYECMIMMYGYCG 362
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
S +AR+ F + E T N+++
Sbjct: 363 SVSRAREIFEEVGESDRVLKASTLNAML 390
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 3/147 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F +LI YGK +F E+ + ++ P + + S++ YGK + AE +F++M
Sbjct: 281 FNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMN 340
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
PS +TY+ ++ + A E+FE + + ++ LK N M+ +Y + G
Sbjct: 341 DMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRV-LKAST--LNAMLEVYCRNG 397
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSL 288
Y +A K F + + TY L
Sbjct: 398 LYIEADKLFHNASAFRVHPDASTYKFL 424
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ LI K N A ++ M NG PNVV+ +L+ + GR+ +A + R M
Sbjct: 191 YTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMM 250
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
K EP+ +T+ ++ FV+ K EA+E++ ++ + + PD + +I G
Sbjct: 251 KRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI---QMSVYPDVFTYGSLINGLCMYG 307
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
D+AR+ F LM G + V Y +L+
Sbjct: 308 LLDEARQMFYLMERNGCYPNEVIYTTLI 335
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 3/159 (1%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G G + A ++ LM +NG PN V T+L+ + K R + IF M + G
Sbjct: 299 LINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKG 358
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+ +TY ++++ + + A+EVF + ++P PD + +N+++ G +
Sbjct: 359 VVANTITYTVLIQGYCLVGRPDVAQEVFNQ-MSSRRAP--PDIRTYNVLLDGLCCNGKVE 415
Query: 265 KARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYD 303
KA F M +R ++ + VTY ++ +V + +D
Sbjct: 416 KALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFD 454
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+TG ++G + A +L M K PNV++ T+L++A+ K G+ A+ ++ M +
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P TY ++ EA ++F + E++ P++ ++ +I+ + K+ +
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLM---ERNGCYPNEVIYTTLIHGFCKSKRVE 345
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
K F M+++G+ +T+TY L+
Sbjct: 346 DGMKIFYEMSQKGVVANTITYTVLI 370
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 9/152 (5%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNK---NGYPPNVVSQTSLMEAYGKGGRYNNAEAIFR 198
F L+ GY +N E +AL ++ G+ PNVV+ T+L+ K N+A +F
Sbjct: 156 FTSLLNGYCH---WNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFN 212
Query: 199 RMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYK 258
+M G P+ VTY ++ + ++ +A + L D K ++P+ F +I +
Sbjct: 213 QMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWL---LRDMMKRRIEPNVITFTALIDAFV 269
Query: 259 KAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
K G +A++ + +M + + TY SL++
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 3/132 (2%)
Query: 158 AEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILK 217
A L M K G+ P++V+ TSL+ Y R +A A+F ++ G +P+ VTY +++
Sbjct: 137 ASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIR 196
Query: 218 TFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERG 277
+ A E+F + + +P+ +N ++ + G + A M +R
Sbjct: 197 CLCKNRHLNHAVELFNQMGTNGS---RPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRR 253
Query: 278 IEQSTVTYNSLM 289
IE + +T+ +L+
Sbjct: 254 IEPNVITFTALI 265
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 3/149 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ LI G+ K K+ M++ G N ++ T L++ Y GR + A+ +F +M
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
P TY ++L K ++A +FE + K + + + ++I K G
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYM---RKREMDINIVTYTIIIQGMCKLG 447
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMS 290
+ A F + +G++ + +TY +++S
Sbjct: 448 KVEDAFDLFCSLFSKGMKPNVITYTTMIS 476
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 88/190 (46%), Gaps = 5/190 (2%)
Query: 97 KNQTIPKDLVIGTLVR-FKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDF 155
+N P +++ TL+ F + K+ ++I + +Q + + +LI GY +G
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIF-YEMSQKGVVANTITYTVLIQGYCLVGRP 379
Query: 156 NGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLI 215
+ A++V M+ PP++ + L++ G+ A IF M+K + + VTY +I
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTII 439
Query: 216 LKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAE 275
++ + K ++A ++F +L +KP+ + MI + + G +A F M E
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSKG---MKPNVITYTTMISGFCRRGLIHEADSLFKKMKE 496
Query: 276 RGIEQSTVTY 285
G + Y
Sbjct: 497 DGFLPNESVY 506
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
+I G K D N A +V M K G + V+ +L+ GR+ +A + R M K
Sbjct: 190 VINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRK 249
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+P+ + + ++ TFV+ EA +++ ++ + + P+ +N +I + G
Sbjct: 250 IDPNVIFFTALIDTFVKEGNLLEARNLYKEMI---RRSVVPNVFTYNSLINGFCIHGCLG 306
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
A+ F LM +G VTYN+L++
Sbjct: 307 DAKYMFDLMVSKGCFPDVVTYNTLIT 332
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 3/153 (1%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F LI + K G+ A + M + PNV + SL+ + G +A+ +F M
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G P VTY ++ F + + ++ ++F + L D +N +I+ Y +AG
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM---TYQGLVGDAFTYNTLIHGYCQAG 373
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETN 294
+ A+K F M + G+ VTYN L+ N
Sbjct: 374 KLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 406
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ G+ + F A ++ M+ G+ PNVV +++ K NNA +F M+K G
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 214
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
AVTY ++ ++ +A + L D K + P+ F +I + K G+
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARL---LRDMVKRKIDPNVIFFTALIDTFVKEGNLL 271
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
+AR + M R + + TYNSL++
Sbjct: 272 EARNLYKEMIRRSVVPNVFTYNSLIN 297
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 3/142 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI GY + G N A+KV M G P++V+ L++ G+ A + +QK
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 424
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+ +TY +I++ + DK KEA +F +L + +KPD + MI + G
Sbjct: 425 MDVDIITYNIIIQGLCRTDKLKEAWCLFRSL---TRKGVKPDAIAYITMISGLCRKGLQR 481
Query: 265 KARKTFALMAERGIEQSTVTYN 286
+A K M E G S Y+
Sbjct: 482 EADKLCRRMKEDGFMPSERIYD 503
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+DF ++T K+ F+ + M G ++ S T L+ + + R + A A+ +
Sbjct: 80 VDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGK 139
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M K G PS VT +L F QG++F+EA + +++ + P+ ++N +I K
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM---DGFGFVPNVVIYNTVINGLCK 196
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLMSFETN 294
+ A + F M ++GI VTYN+L+S +N
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSN 231
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LITG+ K K+ M G + + +L+ Y + G+ N A+ +F RM G
Sbjct: 330 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 389
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P VTY ++L K ++A + E L +KS + D +N++I +
Sbjct: 390 VSPDIVTYNILLDCLCNNGKIEKALVMVEDL---QKSEMDVDIITYNIIIQGLCRTDKLK 446
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
+A F + +G++ + Y +++S
Sbjct: 447 EAWCLFRSLTRKGVKPDAIAYITMIS 472
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G+ G A+ + LM G P+VV+ +L+ + K R + +F M G
Sbjct: 295 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 354
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
A TY ++ + Q K A++VF ++D + PD +N+++ G +
Sbjct: 355 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD---CGVSPDIVTYNILLDCLCNNGKIE 411
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
KA + + ++ +TYN ++
Sbjct: 412 KALVMVEDLQKSEMDVDIITYNIII 436
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 102/212 (48%), Gaps = 9/212 (4%)
Query: 80 QIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLV-IEILEWLRNQSWWDFG 138
Q+++A VL+ + + +P +L++ L + + V +E+ E +R++ +
Sbjct: 380 QVEEATELARVLTSKGI----LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC-EPD 434
Query: 139 KMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFR 198
+ + MLI G + A +L M +G +V++ +L++ + K + AE IF
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFD 494
Query: 199 RMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYK 258
M+ G ++VTY ++ + + ++A ++ + ++ + + KPD+ +N ++ +
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ---KPDKYTYNSLLTHFC 551
Query: 259 KAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
+ G KA M G E VTY +L+S
Sbjct: 552 RGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 583
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 74/167 (44%), Gaps = 3/167 (1%)
Query: 123 IEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLME 182
+ ++ + NQ + + F L+ G K G A +++ +M + GY P+V + S++
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVIS 338
Query: 183 AYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSP 242
K G A + +M P+ VTY ++ T + ++ +EA E+ L
Sbjct: 339 GLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL---TSKG 395
Query: 243 LKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+ PD FN +I ++ A + F M +G E TYN L+
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLI 442
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G+ K AE++ M +G N V+ +L++ K R +A + +M G
Sbjct: 476 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+P TY +L F +G K+A ++ + + + +PD + +I KAG +
Sbjct: 536 QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN---GCEPDIVTYGTLISGLCKAGRVE 592
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
A K + +GI + YN ++
Sbjct: 593 VASKLLRSIQMKGINLTPHAYNPVI 617
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 104 DLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKM----DFIMLITGYGKLGDFNGAE 159
+++I L R QL+ L++E +G + F ++ GY + GD +GA
Sbjct: 193 NVLIKALCRAHQLRPAILMLE--------DMPSYGLVPDEKTFTTVMQGYIEEGDLDGAL 244
Query: 160 KVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ-KFGPEPSAVTYQLILKT 218
++ M + G + VS ++ + K GR +A + M + G P T+ ++
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 219 FVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGI 278
+ K A E+ + +L + PD +N +I K G +A + M R
Sbjct: 305 LCKAGHVKHAIEIMDVML---QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDC 361
Query: 279 EQSTVTYNSLMS 290
+TVTYN+L+S
Sbjct: 362 SPNTVTYNTLIS 373
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F +LI + A +L M G P+ + T++M+ Y + G + A I +M
Sbjct: 192 FNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMV 251
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+FG S V+ +I+ F + + ++A + + + + PDQ FN ++ KAG
Sbjct: 252 EFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDG--FFPDQYTFNTLVNGLCKAG 309
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFET---NYKEVSNIYDQIL 306
A + +M + G + TYNS++S KE + DQ++
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI 357
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ GY + A +L LM +N P++V+ TSL++ Y R ++ +FR + K G
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+AVTY ++++ F Q K K AEE+F+ ++ + PD + +++ G +
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMV---SHGVLPDVMTYGILLDGLCDNGKLE 455
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
KA + F + + ++ V Y +++
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTII 480
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 87/176 (49%), Gaps = 7/176 (3%)
Query: 115 QLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNV 174
+L + N +++++ +RN+ D + F LI GY + + KV ++K G N
Sbjct: 348 RLSEANNMLDLM--VRNKCSPDI--VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANA 403
Query: 175 VSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFET 234
V+ + L++ + + G+ AE +F+ M G P +TY ++L K ++A E+FE
Sbjct: 404 VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFED 463
Query: 235 LLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
L +KS + M+ +I K G + A F + +G++ + +TY ++S
Sbjct: 464 L---QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 516
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ G K G +N +L M PNV++ L++ + K G+ A +++ M G
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ +TY ++ + ++ EA + + ++ ++ S PD F +I Y D
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS---PDIVTFTSLIKGYCMVKRVD 385
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
K F +++RG+ + VTY+ L+
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILV 410
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 6/174 (3%)
Query: 117 KKWNLVIEILEWLR-NQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVV 175
K++NLV++ + L N + ++ ++I + + A VL + K GY P+
Sbjct: 102 KQFNLVLDFCKQLELNGIAHNIYTLN--IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTT 159
Query: 176 SQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETL 235
+ +L++ G+ + A + RM + G +P VTY I+ + A ++ +
Sbjct: 160 TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM 219
Query: 236 LDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
E+ +K D ++ +I + G D A F M +GI+ S VTYNSL+
Sbjct: 220 ---EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
+I + G + A + M G +VV+ SL+ K G++N+ + + M
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ +T+ ++L FV+ K +EA E+++ ++ + P+ +N ++ Y
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMI---TRGISPNIITYNTLMDGYCMQNRLS 350
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
+A LM VT+ SL+
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLI 375
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 65/148 (43%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F +L+ + K G A ++ M G PN+++ +LM+ Y R + A + M
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ P VT+ ++K + + + +VF + K L + +++++ + ++G
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI---SKRGLVANAVTYSILVQGFCQSG 417
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
A + F M G+ +TY L+
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILL 445
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 4/140 (2%)
Query: 153 GDFNGAEKVLALMNKN-GYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPE-PSAV 210
G+ N + K+L N G PN L++ + K G N A + M++ G P+++
Sbjct: 174 GEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSI 233
Query: 211 TYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTF 270
TY ++ + KEA E+FE ++ E + PD FN+MI + +AG ++A+K
Sbjct: 234 TYSTLMDCLFAHSRSKEAVELFEDMISKEG--ISPDPVTFNVMINGFCRAGEVERAKKIL 291
Query: 271 ALMAERGIEQSTVTYNSLMS 290
M + G + Y++LM+
Sbjct: 292 DFMKKNGCNPNVYNYSALMN 311
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 40/213 (18%)
Query: 123 IEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLME 182
+E+ E + ++ + F ++I G+ + G+ A+K+L M KNG PNV + ++LM
Sbjct: 252 VELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMN 311
Query: 183 AYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSP 242
+ K G+ A+ F ++K G + V Y ++ F + E +E + L + + S
Sbjct: 312 GFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNG---ETDEAMKLLGEMKASR 368
Query: 243 LKPDQKMFNMMIY----------------------MYKKAGSY-------------DKAR 267
+ D +N+++ ++ GSY +KA
Sbjct: 369 CRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAV 428
Query: 268 KTFALMAERGIEQSTVTYNSLMS--FETNYKEV 298
K ++M+ERGI T+N L+ E+ Y E+
Sbjct: 429 KFLSVMSERGIWPHHATWNELVVRLCESGYTEI 461
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 3/140 (2%)
Query: 151 KLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAV 210
+ G + A +V+ LM +G +V + L+ + + G A +F +M + G P+ V
Sbjct: 224 RTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLV 283
Query: 211 TYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTF 270
TY ++K FV +E F L + L PD + N+MI+ Y + G +++ARK F
Sbjct: 284 TYTSLIKGFVD---LGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVF 340
Query: 271 ALMAERGIEQSTVTYNSLMS 290
+ +R + T+ S++S
Sbjct: 341 TSLEKRKLVPDQYTFASILS 360
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 3/121 (2%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
ML++G+ + G+ A + M + G PN+V+ TSL++ + G + A + ++Q
Sbjct: 252 MLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSE 311
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
G P V L++ T+ + +F+EA +VF +L EK L PDQ F ++ +G +
Sbjct: 312 GLAPDIVLCNLMIHTYTRLGRFEEARKVFTSL---EKRKLVPDQYTFASILSSLCLSGKF 368
Query: 264 D 264
D
Sbjct: 369 D 369
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 22/178 (12%)
Query: 119 WNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQT 178
W VI E + S +FG +++ YG+ GD + A + M G P T
Sbjct: 294 WQAVISAFEKISKPSRTEFG-----LMVKFYGRRGDMHRARETFERMRARGITPTSRIYT 348
Query: 179 SLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDK-------FKEAEEV 231
SL+ AY G + A + R+M++ G E S VTY +I+ F + F EA+ +
Sbjct: 349 SLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRI 408
Query: 232 FETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+TL + ++ +IY + + + ++A M E GI+ Y+++M
Sbjct: 409 HKTL----------NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMM 456
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 17/181 (9%)
Query: 110 LVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNG 169
LV FK+LK+ ++ + LI Y K+G + A +V +M + G
Sbjct: 469 LVVFKRLKECGFTPTVV--------------TYGCLINLYTKVGKISKALEVSRVMKEEG 514
Query: 170 YPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAE 229
N+ + + ++ + K + NA A+F M K G +P + Y I+ F A
Sbjct: 515 VKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRA- 573
Query: 230 EVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+T+ + +K +P + F +I+ Y K+G ++ + F +M G + T+N L+
Sbjct: 574 --IQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLI 631
Query: 290 S 290
+
Sbjct: 632 N 632
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 86/184 (46%), Gaps = 7/184 (3%)
Query: 106 VIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALM 165
+I LV +Q++K +EIL+ + + + + ++ GY +GD A + +
Sbjct: 630 LINGLVEKRQMEK---AVEILDEM-TLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRL 685
Query: 166 NKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKF 225
G ++ + +L++A K GR +A A+ + M ++ Y +++ + +
Sbjct: 686 QNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDV 745
Query: 226 KEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTY 285
EA ++ + + +K +KPD + I KAG ++A +T M G++ + TY
Sbjct: 746 WEAADLIQQM---KKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTY 802
Query: 286 NSLM 289
+L+
Sbjct: 803 TTLI 806
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 70/141 (49%), Gaps = 3/141 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
++ GY + D V + + G+ P VV+ L+ Y K G+ + A + R M++ G
Sbjct: 455 MMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEG 514
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+ + TY +++ FV+ + A VFE ++ K +KPD ++N +I + G+ D
Sbjct: 515 VKHNLKTYSMMINGFVKLKDWANAFAVFEDMV---KEGMKPDVILYNNIISAFCGMGNMD 571
Query: 265 KARKTFALMAERGIEQSTVTY 285
+A +T M + +T T+
Sbjct: 572 RAIQTVKEMQKLRHRPTTRTF 592
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ M+I G+ KL D+ A V M K G P+V+ +++ A+ G + A + MQ
Sbjct: 522 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ 581
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
K P+ T+ I+ + + + + EVF+ + + P FN +I +
Sbjct: 582 KLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMM---RRCGCVPTVHTFNGLINGLVEKR 638
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
+KA + M G+ + TY +M
Sbjct: 639 QMEKAVEILDEMTLAGVSANEHTYTKIM 666
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
+LI G+ + GD A ++ M K G P++ + TS + A K G N A M+
Sbjct: 734 ILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL 793
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMI 254
G +P+ TY ++K + + ++A +E + + +KPD+ +++ ++
Sbjct: 794 GVKPNIKTYTTLIKGWARASLPEKALSCYEEM---KAMGIKPDKAVYHCLL 841
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/282 (19%), Positives = 122/282 (43%), Gaps = 23/282 (8%)
Query: 12 FGQLSLPPLHKGKLEYGIVTVKMRRRRLEVVCKGMLTPRKFMQRRRKNTVFKDAADEAEK 71
F ++S P + E+G++ VK RR + M R+ +R R + +
Sbjct: 301 FEKISKP----SRTEFGLM-VKFYGRRGD-----MHRARETFERMRARGITPTSRIYTSL 350
Query: 72 KNWWKLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKK---WNLVIEILEW 128
+ + + +D+A S V + +E ++ + +++G + + W + +
Sbjct: 351 IHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHK 410
Query: 129 LRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGG 188
N S +GK +I + + + AE ++ M + G + ++M+ Y
Sbjct: 411 TLNASI--YGK-----IIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVA 463
Query: 189 RYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQK 248
+F+R+++ G P+ VTY ++ + + K +A EV + ++ +K + K
Sbjct: 464 DEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEE---GVKHNLK 520
Query: 249 MFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
++MMI + K + A F M + G++ + YN+++S
Sbjct: 521 TYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIS 562
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 85/171 (49%), Gaps = 4/171 (2%)
Query: 104 DLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLA 163
+ V TL K+W +E+ + LR Q+++ + ++ L+ GK G N A+K+
Sbjct: 89 NTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFD 148
Query: 164 LMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGP-EPSAVTYQLILKTFVQG 222
M + G P V T+L+ AY + ++A +I +M+ F +P TY +LK V
Sbjct: 149 EMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDA 208
Query: 223 DKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALM 273
+F + +++ + DE+ + P+ N+++ Y + G +D+ K + M
Sbjct: 209 SQFDLVDSLYKEM--DERL-ITPNTVTQNIVLSGYGRVGRFDQMEKVLSDM 256
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 7/155 (4%)
Query: 155 FNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRM-QKFGPEPSAVTYQ 213
F+ + + M++ PN V+Q ++ YG+ GR++ E + M +P T
Sbjct: 211 FDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMN 270
Query: 214 LILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALM 273
+IL F K E +E ++P+ + FN++I Y K YDK M
Sbjct: 271 IILSVFGNMGKIDMMESWYEKF---RNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYM 327
Query: 274 AERGIEQSTVTYNSLMSFETNYKEVSNI---YDQI 305
+ +T TYN+++ + + N+ +DQ+
Sbjct: 328 RKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQM 362
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 3/147 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNG--YPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQK 202
+I G + G A VL+ M K PNVVS T+L+ Y + A +F M
Sbjct: 250 IIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLS 309
Query: 203 FGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGS 262
G +P+AVTY ++K + ++ E +++ +D + PD FN++I + AG
Sbjct: 310 RGLKPNAVTYNTLIKGLSEAHRYDEIKDIL-IGGNDAFTTFAPDACTFNILIKAHCDAGH 368
Query: 263 YDKARKTFALMAERGIEQSTVTYNSLM 289
D A K F M + + +Y+ L+
Sbjct: 369 LDAAMKVFQEMLNMKLHPDSASYSVLI 395
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 4/136 (2%)
Query: 169 GYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEA 228
G P+ + +L+ + K + A IF+ M+ + P VTY I+ + K K A
Sbjct: 204 GVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIA 263
Query: 229 EEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSL 288
V +L + + + P+ + ++ Y D+A F M RG++ + VTYN+L
Sbjct: 264 HNVLSGML-KKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTL 322
Query: 289 ---MSFETNYKEVSNI 301
+S Y E+ +I
Sbjct: 323 IKGLSEAHRYDEIKDI 338
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 87/195 (44%), Gaps = 9/195 (4%)
Query: 98 NQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNG 157
+QTI + V+ TL + +K + +W+ N+ + + F +++ G+ + N
Sbjct: 63 SQTISRTTVLQTL---RLIKVPADGLRFFDWVSNKGF-SHKEQSFFLMLEFLGRARNLNV 118
Query: 158 AEKVLALMNKNGYPPNVVSQ---TSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQL 214
A L + + + SL+ +YG G + + +F+ M++ G PS +T+
Sbjct: 119 ARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNS 178
Query: 215 ILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMA 274
+L ++ + A ++F+ + + PD FN +I + K D+A + F M
Sbjct: 179 LLSILLKRGRTGMAHDLFDEM--RRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDME 236
Query: 275 ERGIEQSTVTYNSLM 289
VTYN+++
Sbjct: 237 LYHCNPDVVTYNTII 251
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 170 YPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAE 229
+ P+ + L++A+ G + A +F+ M P + +Y ++++T ++F AE
Sbjct: 349 FAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAE 408
Query: 230 EVFETLLDDE----KSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTY 285
+F L + E K KP +N M G +A K F + +RG+ Q +Y
Sbjct: 409 TLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV-QDPPSY 467
Query: 286 NSLMS 290
+L++
Sbjct: 468 KTLIT 472
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 120/270 (44%), Gaps = 24/270 (8%)
Query: 40 EVVCKGMLTPRKFMQRRRKNTVFKDAADEAEKKNWWKLMEQIDQAGSAVSVLSDEKLKNQ 99
E++ KG L P F + FK+ +++N W ++ Q++ A + ++E + N
Sbjct: 509 EMLEKG-LEPNNFTYSILIDGFFKNK----DEQNAWDVINQMN----ASNFEANEVIYNT 559
Query: 100 TIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAE 159
+I L + Q K E+L+ L + + + +I G+ K+GD + A
Sbjct: 560 ------IINGLCKVGQTSKAK---EMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAV 610
Query: 160 KVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTF 219
+ M++NG PNVV+ TSL+ + K R + A + M+ + Y ++ F
Sbjct: 611 ETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGF 670
Query: 220 VQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIE 279
+ + K A +F L + L P+ ++N +I ++ G D A + M GI
Sbjct: 671 CKKNDMKTAYTLFSEL---PELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGIS 727
Query: 280 QSTVTYNSLMSF---ETNYKEVSNIYDQIL 306
TY +++ + N S++Y ++L
Sbjct: 728 CDLFTYTTMIDGLLKDGNINLASDLYSELL 757
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 82/200 (41%), Gaps = 31/200 (15%)
Query: 121 LVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSL 180
+ +++L +R + + + +I + K G+ A +V+ M G P +V++ TSL
Sbjct: 292 MALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSL 351
Query: 181 MEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILK----------------------- 217
+ Y KG A +F RM++ G P V + ++++
Sbjct: 352 VNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRI 411
Query: 218 --------TFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKT 269
T +QG E+ E + +D M N + ++ K G D A
Sbjct: 412 APSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSF 471
Query: 270 FALMAERGIEQSTVTYNSLM 289
+M ++GIE + V YN++M
Sbjct: 472 LKMMEQKGIEPNVVFYNNMM 491
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 7/160 (4%)
Query: 132 QSWWDFGKM-DFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRY 190
+SW G M + I L+ + K G + A L +M + G PNVV ++M A+ +
Sbjct: 443 ESWIAHGFMCNKIFLL--FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNM 500
Query: 191 NNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMF 250
+ A +IF M + G EP+ TY +++ F + + A +V + S + ++ ++
Sbjct: 501 DLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQM---NASNFEANEVIY 557
Query: 251 NMMIYMYKKAGSYDKARKTFA-LMAERGIEQSTVTYNSLM 289
N +I K G KA++ L+ E+ S +YNS++
Sbjct: 558 NTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSII 597
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 78/166 (46%), Gaps = 6/166 (3%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G+ K D A + + + + G PNV SL+ + G+ + A ++++M G
Sbjct: 666 LIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDG 725
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
TY ++ ++ A +++ LLD + PD+ + +++ K G +
Sbjct: 726 ISCDLFTYTTMIDGLLKDGNINLASDLYSELLD---LGIVPDEILHMVLVNGLSKKGQFL 782
Query: 265 KARKTFALMAERGIEQSTVTYNSLMSF---ETNYKEVSNIYDQILK 307
KA K M ++ + + + Y+++++ E N E ++D++L+
Sbjct: 783 KASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLE 828
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 80/146 (54%), Gaps = 19/146 (13%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L++GY K G+ + A KV LM + NVVS T+L++ Y G+ + AE++F +M
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPER----NVVSWTALVKGYVHNGKVDVAESLFWKM---- 136
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
PE + V++ ++L F+Q + +A +++E + D D MI+ K G D
Sbjct: 137 PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK-------DNIARTSMIHGLCKEGRVD 189
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
+AR+ F M+ER S +T+ ++++
Sbjct: 190 EAREIFDEMSER----SVITWTTMVT 211
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 15/132 (11%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
+I G K G + A ++ M++ +V++ T+++ YG+ R ++A IF M
Sbjct: 178 MIHGLCKEGRVDEAREIFDEMSER----SVITWTTMVTGYGQNNRVDDARKIFDVM---- 229
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
PE + V++ +L +VQ + ++AEE+FE + P+KP N MI + G
Sbjct: 230 PEKTEVSWTSMLMGYVQNGRIEDAEELFEVM------PVKP-VIACNAMISGLGQKGEIA 282
Query: 265 KARKTFALMAER 276
KAR+ F M ER
Sbjct: 283 KARRVFDSMKER 294
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 76/158 (48%), Gaps = 3/158 (1%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ +L+ G+ ++ D +GA KV M + ++++ +L++A K G + +F+ M
Sbjct: 211 YSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMG 270
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G +P A ++ + + + A +V + + ++ L P+ FN +I K
Sbjct: 271 NLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRM---KRYDLVPNVYTFNHIIKTLCKNE 327
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVS 299
D A M ++G T TYNS+M++ ++ EV+
Sbjct: 328 KVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVN 365
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F + I Y GD + A KVL M + PNV + +++ K + ++A + M
Sbjct: 281 FAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMI 340
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ G P TY I+ + A ++ + +++ PD+ +NM++ + + G
Sbjct: 341 QKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRM---DRTKCLPDRHTYNMVLKLLIRIG 397
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
+D+A + + M+ER + TY ++
Sbjct: 398 RFDRATEIWEGMSERKFYPTVATYTVMI 425
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 84/171 (49%), Gaps = 6/171 (3%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
M + +L+ G+ ++ + A ++ M G P++V+ ++E + + ++A +F
Sbjct: 299 MTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHV 358
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M+ GP P+ +Y ++++ F + + A E F+ ++D S L+PD ++ +I +
Sbjct: 359 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD---SGLQPDAAVYTCLITGFGT 415
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYK---EVSNIYDQILK 307
D + M E+G TYN+L+ N K + IY+++++
Sbjct: 416 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQ 466
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ LITG+G + ++L M + G+PP+ + +L++ +A I+ +M
Sbjct: 406 YTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMI 465
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ EPS T+ +I+K++ ++ V+E ++ K + PD + ++I G
Sbjct: 466 QNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMI---KKGICPDDNSYTVLIRGLIGEG 522
Query: 262 SYDKARKTFALMAERGIEQSTVTYN 286
+A + M ++G++ + YN
Sbjct: 523 KSREACRYLEEMLDKGMKTPLIDYN 547
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/217 (18%), Positives = 95/217 (43%), Gaps = 7/217 (3%)
Query: 73 NWWKLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQ 132
N W + + +A + + D+ LK + ++++ L+R +K + I++ ++++
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLR---SRKKSDAIKLFHVMKSK 362
Query: 133 SWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNN 192
+ + ++I + K A + M +G P+ T L+ +G + +
Sbjct: 363 GPCPNVR-SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT 421
Query: 193 AEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNM 252
+ + MQ+ G P TY ++K + A ++ ++ +E ++P FNM
Sbjct: 422 VYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNE---IEPSIHTFNM 478
Query: 253 MIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
++ Y A +Y+ R + M ++GI +Y L+
Sbjct: 479 IMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLI 515
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 106/246 (43%), Gaps = 26/246 (10%)
Query: 66 ADEAEKKNWWKLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNL---- 121
A+ E K W+L++++ Q G + + L L +V+F + K +N
Sbjct: 160 AECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFK 219
Query: 122 --------------VIEILEWLRNQSWWDFGKMDF----IMLITGYGKLGDFNGAEKVLA 163
+++EW+ Q D D I+L T Y +LG + +++
Sbjct: 220 HSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNY-RLGKMDRFDRLFD 278
Query: 164 LMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGD 223
M ++G+ P+ + L+ GKG + A M++ G +PS + Y ++ +
Sbjct: 279 EMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAG 338
Query: 224 KFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTV 283
+ + + ++ K+ +PD + +MI Y +G DKA++ F M +G +
Sbjct: 339 NLEACKYFLDEMV---KAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVF 395
Query: 284 TYNSLM 289
TYNS++
Sbjct: 396 TYNSMI 401
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+ + LI G + G+ + L M K G P+VV T ++ Y G + A+ +FR
Sbjct: 325 LHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFRE 384
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M G P+ TY +++ +F+EA + + + E P+ +++ ++ +K
Sbjct: 385 MTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEM---ESRGCNPNFVVYSTLVSYLRK 441
Query: 260 AGSYDKARKTFALMAERG 277
AG +ARK M ++G
Sbjct: 442 AGKLSEARKVIREMVKKG 459
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 109/233 (46%), Gaps = 10/233 (4%)
Query: 62 FKDAADEAEKKNWWKLMEQIDQAG-SAVSVLSDEKLK-NQTIPKDLVIGTLVRFK---QL 116
F ++A+ + + L Q+D++G ++ SVL + ++ + + +++++G L +
Sbjct: 69 FLESANHSASRVLVTL--QLDESGFNSKSVLDELNVRVSGLLVREVLVGILRNLSYDNKA 126
Query: 117 KKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVS 176
+ L W Q + + +L+ + + G++ +++ M ++G+P +
Sbjct: 127 RCAKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTART 186
Query: 177 QTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLL 236
L+ + G+ G A F + + F P +Y IL + + ++K E V++ +L
Sbjct: 187 FNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQML 246
Query: 237 DDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+D S PD +N++++ + G D+ + F MA G + TYN L+
Sbjct: 247 EDGFS---PDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILL 296
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F++LI YGK G + K+ M G + S SL + + GRY A+ F +M
Sbjct: 188 FVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMV 247
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G EP+ TY L+L F + + A FE D + + PD FN MI + +
Sbjct: 248 SEGVEPTRHTYNLMLWGFFLSLRLETALRFFE---DMKTRGISPDDATFNTMINGFCRFK 304
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
D+A K F M I S V+Y +++
Sbjct: 305 KMDEAEKLFVEMKGNKIGPSVVSYTTMI 332
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 2/148 (1%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F +I G+ + + AEK+ M N P+VVS T++++ Y R ++ IF M+
Sbjct: 293 FNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMR 352
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G EP+A TY +L K EA+ + + ++ +P D +F ++ KAG
Sbjct: 353 SSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAP--KDNSIFLKLLVSQSKAG 410
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
A + MA + Y L+
Sbjct: 411 DMAAATEVLKAMATLNVPAEAGHYGVLI 438
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 84/182 (46%), Gaps = 3/182 (1%)
Query: 117 KKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVS 176
KK ++ W + + +I G++ N A +L M + G P +
Sbjct: 128 KKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDM 187
Query: 177 QTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLL 236
L+E+YGK G + IF++M+ G E + +Y + K ++ ++ A+ F ++
Sbjct: 188 FVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMV 247
Query: 237 DDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYK 296
+ ++P + +N+M++ + + + A + F M RGI T+N++++ +K
Sbjct: 248 SE---GVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFK 304
Query: 297 EV 298
++
Sbjct: 305 KM 306
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI+ Y G A +++ M G+ P V + +++ K G+Y A+ +F M + G
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P + TY+ +L + E E+VF D + PD F+ M+ ++ ++G+ D
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFS---DMRSRDVVPDLVCFSSMMSLFTRSGNLD 392
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
KA F + E G+ V Y L+
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILI 417
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 92/215 (42%), Gaps = 9/215 (4%)
Query: 80 QIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLK-KWNLVIEILEWLRNQSWWDFG 138
++ +A A ++L + + +IG+LVR ++ W + EI ++S
Sbjct: 180 KLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI-----SRSGVGIN 234
Query: 139 KMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFR 198
+++ K G L+ + + G P++V+ +L+ AY G A +
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMN 294
Query: 199 RMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYK 258
M G P TY ++ + K++ A+EVF +L +S L PD + ++
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML---RSGLSPDSTTYRSLLMEAC 351
Query: 259 KAGSYDKARKTFALMAERGIEQSTVTYNSLMSFET 293
K G + K F+ M R + V ++S+MS T
Sbjct: 352 KKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFT 386
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 68/146 (46%), Gaps = 3/146 (2%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
+LI G+ KLG+ A ++ M + +VV+ +L++ +GK G + A+ I+ M
Sbjct: 485 ILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK 544
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
P+ ++Y +++ EA V++ ++ +KP + N MI Y ++G+
Sbjct: 545 EILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN---IKPTVMICNSMIKGYCRSGNA 601
Query: 264 DKARKTFALMAERGIEQSTVTYNSLM 289
M G ++YN+L+
Sbjct: 602 SDGESFLEKMISEGFVPDCISYNTLI 627
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 78/171 (45%), Gaps = 4/171 (2%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+ + +L+ G A +V M P V+ S+++ Y + G ++ E+ +
Sbjct: 551 ISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEK 610
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M G P ++Y ++ FV+ + +A + + +++E+ L PD +N +++ + +
Sbjct: 611 MISEGFVPDCISYNTLIYGFVREENMSKAFGLVKK-MEEEQGGLVPDVFTYNSILHGFCR 669
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLMS---FETNYKEVSNIYDQILK 307
+A M ERG+ TY +++ + N E I+D++L+
Sbjct: 670 QNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQ 720
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F +++ + + G+ + A + + G P+ V T L++ Y + G + A + M
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ G VTY IL + EA+++F + + L PD ++I + K G
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE---RALFPDSYTLTILIDGHCKLG 494
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
+ A + F M E+ I VTYN+L+
Sbjct: 495 NLQNAMELFQKMKEKRIRLDVVTYNTLL 522
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 85/171 (49%), Gaps = 6/171 (3%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
M + +L+ G+ ++ + A ++ M +G P++V+ ++E + + ++A +F
Sbjct: 298 MTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHV 357
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M+ GP P+ +Y ++++ F + + A E F+ ++D S L+PD ++ +I +
Sbjct: 358 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD---SGLQPDAAVYTCLITGFGT 414
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYK---EVSNIYDQILK 307
D + M E+G TYN+L+ N K + IY+++++
Sbjct: 415 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQ 465
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ LITG+G + ++L M + G+PP+ + +L++ + I+ +M
Sbjct: 405 YTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMI 464
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ EPS T+ +I+K++ ++ V++ ++ K + PD + ++I G
Sbjct: 465 QNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMI---KKGICPDDNSYTVLIRGLISEG 521
Query: 262 SYDKARKTFALMAERGIEQSTVTYN 286
+A + M ++G++ + YN
Sbjct: 522 KSREACRYLEEMLDKGMKTPLIDYN 546
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/217 (18%), Positives = 94/217 (43%), Gaps = 7/217 (3%)
Query: 73 NWWKLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQ 132
N W + + +A + + D LK + ++++ L+R +KK + I++ ++++
Sbjct: 305 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLR--SMKKSD-AIKLFHVMKSK 361
Query: 133 SWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNN 192
+ + ++I + K A + M +G P+ T L+ +G + +
Sbjct: 362 GPCPNVR-SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT 420
Query: 193 AEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNM 252
+ + MQ+ G P TY ++K + ++ ++ +E ++P FNM
Sbjct: 421 VYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNE---IEPSIHTFNM 477
Query: 253 MIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
++ Y A +Y+ R + M ++GI +Y L+
Sbjct: 478 IMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLI 514
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 85/171 (49%), Gaps = 6/171 (3%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
M + +L+ G+ ++ + A ++ M +G P++V+ ++E + + ++A +F
Sbjct: 299 MTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHV 358
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M+ GP P+ +Y ++++ F + + A E F+ ++D S L+PD ++ +I +
Sbjct: 359 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD---SGLQPDAAVYTCLITGFGT 415
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYK---EVSNIYDQILK 307
D + M E+G TYN+L+ N K + IY+++++
Sbjct: 416 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQ 466
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ LITG+G + ++L M + G+PP+ + +L++ + I+ +M
Sbjct: 406 YTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMI 465
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ EPS T+ +I+K++ ++ V++ ++ K + PD + ++I G
Sbjct: 466 QNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMI---KKGICPDDNSYTVLIRGLISEG 522
Query: 262 SYDKARKTFALMAERGIEQSTVTYN 286
+A + M ++G++ + YN
Sbjct: 523 KSREACRYLEEMLDKGMKTPLIDYN 547
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/217 (18%), Positives = 94/217 (43%), Gaps = 7/217 (3%)
Query: 73 NWWKLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQ 132
N W + + +A + + D LK + ++++ L+R +KK + I++ ++++
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLR--SMKKSD-AIKLFHVMKSK 362
Query: 133 SWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNN 192
+ + ++I + K A + M +G P+ T L+ +G + +
Sbjct: 363 GPCPNVR-SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT 421
Query: 193 AEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNM 252
+ + MQ+ G P TY ++K + ++ ++ +E ++P FNM
Sbjct: 422 VYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNE---IEPSIHTFNM 478
Query: 253 MIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
++ Y A +Y+ R + M ++GI +Y L+
Sbjct: 479 IMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLI 515
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 75/151 (49%), Gaps = 3/151 (1%)
Query: 139 KMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFR 198
++ + +LI+G + G + A K+ M +G P+ V+ +L++ + K GR A + R
Sbjct: 233 RVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLR 292
Query: 199 RMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYK 258
+K G Y ++ + ++ +A E++ +L K +KPD ++ ++I
Sbjct: 293 LFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML---KKNIKPDIILYTILIQGLS 349
Query: 259 KAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
KAG + A K + M +GI T YN+++
Sbjct: 350 KAGKIEDALKLLSSMPSKGISPDTYCYNAVI 380
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ +LI G K G A K+L+ M G P+ ++++A G ++ M
Sbjct: 341 YTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMS 400
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ P A T+ +++ + + +EAEE+F + EKS P FN +I K+G
Sbjct: 401 ETESFPDACTHTILICSMCRNGLVREAEEIFTEI---EKSGCSPSVATFNALIDGLCKSG 457
Query: 262 SYDKAR 267
+AR
Sbjct: 458 ELKEAR 463
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 7/143 (4%)
Query: 152 LGDFNGAE---KVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPS 208
L + NG + + L + G + L+ AY K G A F RM++F P
Sbjct: 102 LSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPD 161
Query: 209 AVTYQLILKTFVQGDK-FKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKAR 267
TY +IL+ ++ + F A V+ +L K P+ F +++ K G A+
Sbjct: 162 VFTYNVILRVMMREEVFFMLAFAVYNEML---KCNCSPNLYTFGILMDGLYKKGRTSDAQ 218
Query: 268 KTFALMAERGIEQSTVTYNSLMS 290
K F M RGI + VTY L+S
Sbjct: 219 KMFDDMTGRGISPNRVTYTILIS 241
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 95/195 (48%), Gaps = 8/195 (4%)
Query: 91 LSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYG 150
LS E + P VI +L R + +K ++ L+ + G F +++
Sbjct: 363 LSGEARRRGIKPFSDVIHSLCRMRNVKDAKALL--LDMISKGPAP--GNAVFNLVVHACS 418
Query: 151 KLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAV 210
K GD + A++VL LM G P+V + T ++ Y KGG + A+ I +K + S V
Sbjct: 419 KTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPV 478
Query: 211 TYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYK-KAGSYDKARKT 269
TY +++ + K +E +E + L + ++ ++P+ +N +I + KA ++KA
Sbjct: 479 TYHALIRGYC---KIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVL 535
Query: 270 FALMAERGIEQSTVT 284
F M ++G+ + ++
Sbjct: 536 FEEMKQKGLHLNAIS 550
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 161 VLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFV 220
+L +++K P N V ++ A K G + A+ + + M+ G +P TY +I+ +
Sbjct: 395 LLDMISKGPAPGNAVFNL-VVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYA 453
Query: 221 QGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQ 280
+G EA+E+ L + +K K ++ +I Y K YD+A K M G++
Sbjct: 454 KGGMMDEAQEI---LAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQP 510
Query: 281 STVTYNSLM 289
+ YN L+
Sbjct: 511 NADEYNKLI 519
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 17/212 (8%)
Query: 87 AVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFG----KMDF 142
A L DE + P + G LVR K L + LE L + FG K+ +
Sbjct: 165 AARELFDEMPEKGCKPNEFTFGILVR--GYCKAGLTDKGLELL--NAMESFGVLPNKVIY 220
Query: 143 IMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRM-- 200
+++ + + G + +EK++ M + G P++V+ S + A K G+ +A IF M
Sbjct: 221 NTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMEL 280
Query: 201 -QKFG-PEPSAVTYQLILKTFVQGDKFKEAEEVFETLL-DDEKSPLKPDQKMFNMMIYMY 257
+ G P P+++TY L+LK F + ++A+ +FE++ +D+ + L+ +N+ +
Sbjct: 281 DEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQS----YNIWLQGL 336
Query: 258 KKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+ G + +A M ++GI S +YN LM
Sbjct: 337 VRHGKFIEAETVLKQMTDKGIGPSIYSYNILM 368
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
Query: 146 ITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGP 205
+ G + G F AE VL M G P++ S LM+ K G ++A+ I M++ G
Sbjct: 333 LQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGV 392
Query: 206 EPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDK 265
P AVTY +L + K A+ + + ++ ++ P+ N++++ K G +
Sbjct: 393 CPDAVTYGCLLHGYCSVGKVDAAKSLLQEMM---RNNCLPNAYTCNILLHSLWKMGRISE 449
Query: 266 ARKTFALMAERGIEQSTVTYNSLM 289
A + M E+G TVT N ++
Sbjct: 450 AEELLRKMNEKGYGLDTVTCNIIV 473
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 124/299 (41%), Gaps = 39/299 (13%)
Query: 39 LEVVCK-GMLTPRK-FMQRRRKNTVFKDAADEAEKKNWWKLMEQIDQAGSAVSVLSDEKL 96
++ +CK GML+ K + ++N V DA + + + ++D A S L E +
Sbjct: 368 MDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKS----LLQEMM 423
Query: 97 KNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLR--NQSWWDFGKMDFIMLITGYGKLGD 154
+N +P L+ L K + E E LR N+ + + +++ G G+
Sbjct: 424 RNNCLPNAYTCNILLH--SLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGE 481
Query: 155 FNGAEKVL---------ALMN--------------KNGYPPNVVSQTSLMEAYGKGGRYN 191
+ A +++ AL N +N P++++ ++L+ K GR+
Sbjct: 482 LDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFA 541
Query: 192 NAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFN 251
A+ +F M +P +V Y + + F + K A F L D EK + +N
Sbjct: 542 EAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSA---FRVLKDMEKKGCHKSLETYN 598
Query: 252 MMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEV---SNIYDQILK 307
+I + M E+GI + TYN+ + + ++V +N+ D++++
Sbjct: 599 SLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQ 657
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
+L+ G KLG + A+ ++ LM +NG P+ V+ L+ Y G+ + A+++ + M +
Sbjct: 366 ILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRN 425
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
P+A T ++L + + + EAEE+ + +EK D N+++ +G
Sbjct: 426 NCLPNAYTCNILLHSLWKMGRISEAEELLRKM--NEKG-YGLDTVTCNIIVDGLCGSGEL 482
Query: 264 DKA 266
DKA
Sbjct: 483 DKA 485
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 4/141 (2%)
Query: 161 VLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFV 220
+L +NK G P+VV+ T+L++ + G + I M+ G P+ Y +I+
Sbjct: 568 MLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLC 627
Query: 221 QGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQ 280
Q + +EAE++ + D S + P+ + +M+ Y G D+A +T M ERG E
Sbjct: 628 QFGRVEEAEKLLSAMQD---SGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYEL 684
Query: 281 STVTYNSLM-SFETNYKEVSN 300
+ Y+SL+ F + K + N
Sbjct: 685 NDRIYSSLLQGFVLSQKGIDN 705
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI GY K G A ++L +M K PNV + LME + G+ A + +RM G
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P V+Y +++ + A ++ ++ ++PD F +I + K G D
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSM---NCFDIEPDCLTFTAIINAFCKQGKAD 493
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
A LM +GI VT +L+
Sbjct: 494 VASAFLGLMLRKGISLDEVTGTTLI 518
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ L+ G + GD G+ ++L LM +G PNV T ++ + GR AE + MQ
Sbjct: 584 YTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQ 643
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLD 237
G P+ VTY +++K +V K A E +++
Sbjct: 644 DSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVE 679
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 12/171 (7%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ +LI G + A + M G PNV + T L++ + G+ A + R+M
Sbjct: 304 YTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMV 363
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
K PS +TY ++ + + + A FE L EK KP+ + FN ++ + G
Sbjct: 364 KDRIFPSVITYNALINGYCKDGRVVPA---FELLTVMEKRACKPNVRTFNELMEGLCRVG 420
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMS-------FETNYKEVS--NIYD 303
KA M + G+ V+YN L+ T YK +S N +D
Sbjct: 421 KPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFD 471
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Query: 107 IGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMN 166
+G +V KQ W + Q+ D + ITG+ + + + A KV M
Sbjct: 168 LGYVVEAKQYVTWLI----------QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMT 217
Query: 167 KNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFK 226
+NG N VS T L+ + + + A ++ +M+ P+ TY +++ +
Sbjct: 218 QNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKS 277
Query: 227 EAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYN 286
EA +F+ + +S +KPD M+ ++I + + D+A M E G+ + +TYN
Sbjct: 278 EAMNLFKQM---SESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYN 334
Query: 287 SLM 289
+L+
Sbjct: 335 ALI 337
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 84/171 (49%), Gaps = 4/171 (2%)
Query: 132 QSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYN 191
Q+ ++ + LI G + + A +L M + PNV + T L++A G+ +
Sbjct: 218 QNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKS 277
Query: 192 NAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFN 251
A +F++M + G +P Y +++++F GD EA + E +L++ L P+ +N
Sbjct: 278 EAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENG---LMPNVITYN 334
Query: 252 MMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIY 302
+I + K + KA + M E+ + +TYN+L++ + + + + Y
Sbjct: 335 ALIKGFCKKNVH-KAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAY 384
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 106 VIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALM 165
++ TLV+ +++ + + E LR QS D F +LI G +G A ++L +M
Sbjct: 177 LLNTLVKLDRVEDAMKLFD--EHLRFQSCND--TKTFNILIRGLCGVGKAEKALELLGVM 232
Query: 166 NKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG-PEPSAVTYQLILKTFVQGDK 224
+ G P++V+ +L++ + K N A +F+ ++ P VTY ++ + + K
Sbjct: 233 SGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 225 FKEAEEVFETLLDDE-KSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTV 283
+EA +LLDD + + P FN+++ Y KAG A + M G V
Sbjct: 293 MREAS----SLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVV 348
Query: 284 TYNSLMSFETNYKEVS 299
T+ SL+ +VS
Sbjct: 349 TFTSLIDGYCRVGQVS 364
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 74/150 (49%), Gaps = 3/150 (2%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+ F +L+ GY K G+ AE++ M G P+VV+ TSL++ Y + G+ + ++
Sbjct: 313 VTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEE 372
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M G P+A TY +++ ++ +A E+ L + + P M+N +I + K
Sbjct: 373 MNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD---IIPQPFMYNPVIDGFCK 429
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLM 289
AG ++A M ++ + +T+ L+
Sbjct: 430 AGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
Query: 145 LITGYGKLGDFNGAEKVLA-LMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
LI G+ K + N A ++ + + + P+VV+ TS++ Y K G+ A ++ M +
Sbjct: 247 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 306
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
G P+ VT+ +++ + + + AEE+ ++ PD F +I Y + G
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS---FGCFPDVVTFTSLIDGYCRVGQV 363
Query: 264 DKARKTFALMAERGIEQSTVTYNSLMSFETN 294
+ + + M RG+ + TY+ L++ N
Sbjct: 364 SQGFRLWEEMNARGMFPNAFTYSILINALCN 394
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
Query: 112 RFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYP 171
RF + ++ L I S+W + +L K G + A ++ M +G
Sbjct: 88 RFWEFSRFKLNIR-------HSFWTYN-----LLTRSLCKAGLHDLAGQMFECMKSDGVS 135
Query: 172 PNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEV 231
PN L+ ++ + G+ + A A+ +Q F E + +L T V+ D+ ++A ++
Sbjct: 136 PNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKL 193
Query: 232 FETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
F+ L + D K FN++I G +KA + +M+ G E VTYN+L+
Sbjct: 194 FDEHLRFQSCN---DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLI 248
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 106 VIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALM 165
++ TLV+ +++ + + E LR QS D F +LI G +G A ++L +M
Sbjct: 177 LLNTLVKLDRVEDAMKLFD--EHLRFQSCND--TKTFNILIRGLCGVGKAEKALELLGVM 232
Query: 166 NKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG-PEPSAVTYQLILKTFVQGDK 224
+ G P++V+ +L++ + K N A +F+ ++ P VTY ++ + + K
Sbjct: 233 SGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 225 FKEAEEVFETLLDDE-KSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTV 283
+EA +LLDD + + P FN+++ Y KAG A + M G V
Sbjct: 293 MREAS----SLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVV 348
Query: 284 TYNSLMSFETNYKEVS 299
T+ SL+ +VS
Sbjct: 349 TFTSLIDGYCRVGQVS 364
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 74/150 (49%), Gaps = 3/150 (2%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+ F +L+ GY K G+ AE++ M G P+VV+ TSL++ Y + G+ + ++
Sbjct: 313 VTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEE 372
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M G P+A TY +++ ++ +A E+ L + + P M+N +I + K
Sbjct: 373 MNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD---IIPQPFMYNPVIDGFCK 429
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLM 289
AG ++A M ++ + +T+ L+
Sbjct: 430 AGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
Query: 145 LITGYGKLGDFNGAEKVLA-LMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
LI G+ K + N A ++ + + + P+VV+ TS++ Y K G+ A ++ M +
Sbjct: 247 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 306
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
G P+ VT+ +++ + + + AEE+ ++ PD F +I Y + G
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS---FGCFPDVVTFTSLIDGYCRVGQV 363
Query: 264 DKARKTFALMAERGIEQSTVTYNSLMSFETN 294
+ + + M RG+ + TY+ L++ N
Sbjct: 364 SQGFRLWEEMNARGMFPNAFTYSILINALCN 394
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
Query: 112 RFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYP 171
RF + ++ L I S+W + +L K G + A ++ M +G
Sbjct: 88 RFWEFSRFKLNIR-------HSFWTYN-----LLTRSLCKAGLHDLAGQMFECMKSDGVS 135
Query: 172 PNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEV 231
PN L+ ++ + G+ + A A+ +Q F E + +L T V+ D+ ++A ++
Sbjct: 136 PNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKL 193
Query: 232 FETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
F+ L + D K FN++I G +KA + +M+ G E VTYN+L+
Sbjct: 194 FDEHLRFQSCN---DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLI 248
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 77/146 (52%), Gaps = 3/146 (2%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
M+++GY + G + ++L M + G+ VS +L+ + + G ++A + M K
Sbjct: 243 MVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKS 302
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
G +P+ VT+ ++ F + K +EA +VF + + + P+ +N +I Y + G +
Sbjct: 303 GLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM---KAVNVAPNTVTYNTLINGYSQQGDH 359
Query: 264 DKARKTFALMAERGIEQSTVTYNSLM 289
+ A + + M GI++ +TYN+L+
Sbjct: 360 EMAFRFYEDMVCNGIQRDILTYNALI 385
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 78/166 (46%), Gaps = 5/166 (3%)
Query: 126 LEWLRNQSWWDFGKMD--FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEA 183
+E L++ F D + LI G+ + G + A K+ +M K+G PNVV+ +L+
Sbjct: 258 IELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHG 317
Query: 184 YGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPL 243
+ + + A +F M+ P+ VTY ++ + Q + A +E ++ + +
Sbjct: 318 FCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCN---GI 374
Query: 244 KPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+ D +N +I+ K KA + + + + ++ T+++L+
Sbjct: 375 QRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 77/146 (52%), Gaps = 3/146 (2%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
M+++GY + G + ++L M + G+ VS +L+ + + G ++A + M K
Sbjct: 243 MVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKS 302
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
G +P+ VT+ ++ F + K +EA +VF + + + P+ +N +I Y + G +
Sbjct: 303 GLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM---KAVNVAPNTVTYNTLINGYSQQGDH 359
Query: 264 DKARKTFALMAERGIEQSTVTYNSLM 289
+ A + + M GI++ +TYN+L+
Sbjct: 360 EMAFRFYEDMVCNGIQRDILTYNALI 385
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 78/166 (46%), Gaps = 5/166 (3%)
Query: 126 LEWLRNQSWWDFGKMD--FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEA 183
+E L++ F D + LI G+ + G + A K+ +M K+G PNVV+ +L+
Sbjct: 258 IELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHG 317
Query: 184 YGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPL 243
+ + + A +F M+ P+ VTY ++ + Q + A +E ++ + +
Sbjct: 318 FCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCN---GI 374
Query: 244 KPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+ D +N +I+ K KA + + + + ++ T+++L+
Sbjct: 375 QRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 2/154 (1%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F ++ Y + G A KVL LM + G PN++ + ++ + + R A RMQ
Sbjct: 245 FSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQ 304
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G P+ VTY +++ + + +EA E+ E + K L + +M Y+ K+
Sbjct: 305 VVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDM--HSKGCLPDKVSYYTIMGYLCKEKR 362
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETNY 295
+ + E G+ VTYN+L+ T +
Sbjct: 363 IVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKH 396
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ ++ G+ +LG+ + A+K+L +M+ +G+ PN VS T+L+ + G+ A + +
Sbjct: 457 YTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSE 516
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLK---PDQKMFNMMIYMYK 258
+ P+++TY +I+ + K EA +V ++ LK P N+++
Sbjct: 517 EHWWSPNSITYSVIMHGLRREGKLSEACDVVREMV------LKGFFPGPVEINLLLQSLC 570
Query: 259 KAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+ G +ARK +G + V + +++
Sbjct: 571 RDGRTHEARKFMEECLNKGCAINVVNFTTVI 601
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 75/176 (42%), Gaps = 3/176 (1%)
Query: 128 WLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKG 187
W Q + M + ++ K G+ +VL LM + G + + +M +Y +
Sbjct: 196 WADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRA 255
Query: 188 GRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQ 247
G+ +A + MQ+ G EP+ + + FV+ ++ ++A E + + + P+
Sbjct: 256 GQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERM---QVVGIVPNV 312
Query: 248 KMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYD 303
+N MI Y ++A + M +G V+Y ++M + K + + D
Sbjct: 313 VTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRD 368
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 106/207 (51%), Gaps = 12/207 (5%)
Query: 87 AVSVLSDEKLKNQTIPKDLVIGTLVR-FKQLKKWNLVIEILEWLRNQSWWDFGKMDFIML 145
AVS+L + + ++ IP D+ GTL+ + ++ + +L + + + + + +L
Sbjct: 311 AVSLL-ERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY-HLNQHIYSVL 368
Query: 146 ITGYGKLGDFNGAEKVLAL---MNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQK 202
I+G K G AE+ ++L M + G PN+V + L++ + G+ N A+ I RM
Sbjct: 369 ISGLFKEGK---AEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIA 425
Query: 203 FGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGS 262
G P+A TY ++K F + +EA +V++ + +K+ ++ ++++I G
Sbjct: 426 SGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEM---DKTGCSRNKFCYSVLIDGLCGVGR 482
Query: 263 YDKARKTFALMAERGIEQSTVTYNSLM 289
+A ++ M GI+ TV Y+S++
Sbjct: 483 VKEAMMVWSKMLTIGIKPDTVAYSSII 509
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
+LI G K GD K++ M G PN V+ +L+ G+ + A ++ RM
Sbjct: 262 VLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSS 321
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
P+ VTY ++ V+ + +A + ++ E+ +Q +++++I K G
Sbjct: 322 KCIPNDVTYGTLINGLVKQRRATDAVRLLSSM---EERGYHLNQHIYSVLISGLFKEGKA 378
Query: 264 DKARKTFALMAERGIEQSTVTYNSLM 289
++A + MAE+G + + V Y+ L+
Sbjct: 379 EEAMSLWRKMAEKGCKPNIVVYSVLV 404
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 2/148 (1%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F L+ G+ + G A++VL M + G P++V T+L+ Y G+ +A + M+
Sbjct: 239 FTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMR 298
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
K G EP+ Y ++++ + + K +E ++ E+ + D + +I + K G
Sbjct: 299 KRGFEPNVNCYTVLIQALCRTE--KRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWG 356
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
DK M ++G+ S VTY +M
Sbjct: 357 MIDKGYSVLDDMRKKGVMPSQVTYMQIM 384
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 4/158 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKG-GRYNNAEAIFRRM 200
F L++GY G A ++ M K G+ PNV T L++A + R + A +F M
Sbjct: 274 FTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEM 333
Query: 201 QKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKA 260
+++G E VTY ++ F K+ ++ + L D K + P Q + ++ ++K
Sbjct: 334 ERYGCEADIVTYTALISGFC---KWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKK 390
Query: 261 GSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEV 298
+++ + M RG + YN ++ EV
Sbjct: 391 EQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEV 428
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 100/218 (45%), Gaps = 11/218 (5%)
Query: 77 LMEQIDQAGSAVSVLSDEKLKN-QTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWW 135
++ ++ Q G+ ++ + + N + I +L + + RF N+V + +E L +
Sbjct: 140 ILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASA---NMVKKAVEVLDEMPKY 196
Query: 136 DFGKMDFIM--LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNA 193
+++ L+ K G A KV M + +PPN+ TSL+ + + G+ A
Sbjct: 197 GLEPDEYVFGCLLDALCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGWCREGKLMEA 255
Query: 194 EAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMM 253
+ + +M++ G EP V + +L + K +A ++ + D K +P+ + ++
Sbjct: 256 KEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADA---YDLMNDMRKRGFEPNVNCYTVL 312
Query: 254 I-YMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
I + + D+A + F M G E VTY +L+S
Sbjct: 313 IQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALIS 350
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 4/124 (3%)
Query: 180 LMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDE 239
LM + A + M K+G EP + +L + KEA +VFE D
Sbjct: 173 LMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFE----DM 228
Query: 240 KSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVS 299
+ P+ + F ++Y + + G +A++ M E G+E V + +L+S + +++
Sbjct: 229 REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMA 288
Query: 300 NIYD 303
+ YD
Sbjct: 289 DAYD 292
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 4/153 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ LI+G+ K G + VL M K G P+ V+ +M A+ K ++ + +M+
Sbjct: 345 YTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMK 404
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ G P + Y ++++ + + KEA ++ + E + L P F +MI + G
Sbjct: 405 RRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEM---EANGLSPGVDTFVIMINGFTSQG 461
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETN 294
+A F M RGI S Y +L S N
Sbjct: 462 FLIEACNHFKEMVSRGI-FSAPQYGTLKSLLNN 493
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 158 AEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILK 217
A +V M + G ++V+ T+L+ + K G + ++ M+K G PS VTY I+
Sbjct: 326 AMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMV 385
Query: 218 TFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERG 277
+ ++F+E E+ E + ++ PD ++N++I + K G +A + + M G
Sbjct: 386 AHEKKEQFEECLELIEKM---KRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANG 442
Query: 278 IEQSTVTY 285
+ T+
Sbjct: 443 LSPGVDTF 450
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 173 NVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVF 232
+V S+T LM + GR A +IF + + G +PS +TY ++ + F +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 233 ETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+ EK+ LKPD +FN +I ++G+ D+A K F M E G + + T+N+L+
Sbjct: 378 SKV---EKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLI 431
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 77/149 (51%), Gaps = 2/149 (1%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+ + L+T + F+ +++ + KNG P+ + +++ A + G + A IF +
Sbjct: 355 ITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEK 414
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M++ G +P+A T+ ++K + + K +E+ + + +L DE L+P+ + N+++ +
Sbjct: 415 MKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEM--LQPNDRTCNILVQAWCN 472
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSL 288
++A M G++ VT+N+L
Sbjct: 473 QRKIEEAWNIVYKMQSYGVKPDVVTFNTL 501
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 67/146 (45%), Gaps = 3/146 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
++ GY + G A + M + G PN+ SL++ + + + M++FG
Sbjct: 537 IVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFG 596
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+P VT+ ++ + K EE++ +L+ + PD F+++ Y +AG +
Sbjct: 597 VKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLE---GGIDPDIHAFSILAKGYARAGEPE 653
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
KA + M + G+ + V Y ++S
Sbjct: 654 KAEQILNQMRKFGVRPNVVIYTQIIS 679
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F L+ + +GD E++ M + G P++ + + L + Y + G AE I +M+
Sbjct: 604 FSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMR 663
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKA 260
KFG P+ V Y I+ + + K+A +V++ + L P+ + +I+ + +A
Sbjct: 664 KFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCG--IVGLSPNLTTYETLIWGFGEA 720
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 66/148 (44%), Gaps = 4/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEK-VLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRM 200
F L Y ++G AE ++ M N PNV + +++ Y + G+ A F RM
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Query: 201 QKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKA 260
++ G P+ + ++K F+ + EV + + E+ +KPD F+ ++ +
Sbjct: 558 KELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLM---EEFGVKPDVVTFSTLMNAWSSV 614
Query: 261 GSYDKARKTFALMAERGIEQSTVTYNSL 288
G + + + M E GI+ ++ L
Sbjct: 615 GDMKRCEEIYTDMLEGGIDPDIHAFSIL 642
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Query: 138 GKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIF 197
G + F LI G + G + + K G P+VV T ++ Y GG AE +F
Sbjct: 326 GVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMF 385
Query: 198 RRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMY 257
+ M + G P+ TY +++ F KFKEA + + + E P+ +++ ++
Sbjct: 386 KEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEM---ESRGCNPNFVVYSTLVNNL 442
Query: 258 KKAGSYDKARKTFALMAERG 277
K AG +A + M E+G
Sbjct: 443 KNAGKVLEAHEVVKDMVEKG 462
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L TG L N +L M + G P V+ T+L++ + G+ + K G
Sbjct: 302 LATGNKPLAALN----LLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVG 357
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P V Y +++ ++ G + ++AEE+F+ + EK L P+ +N MI + AG +
Sbjct: 358 CTPDVVCYTVMITGYISGGELEKAEEMFKEM--TEKGQL-PNVFTYNSMIRGFCMAGKFK 414
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
+A M RG + V Y++L++
Sbjct: 415 EACALLKEMESRGCNPNFVVYSTLVN 440
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 84/188 (44%), Gaps = 15/188 (7%)
Query: 106 VIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFI---MLITGYGKLGDFNGAEKVL 162
++ +L+ KQ K +++W+ Q D D + +++ +LG + ++L
Sbjct: 228 ILHSLLGVKQYK-------LIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLL 280
Query: 163 ALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQG 222
M K+G+ P++ + L+ G + A + M++ G EP + + ++ +
Sbjct: 281 DEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRA 340
Query: 223 DKFKEAEEVFETLLDDE-KSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQS 281
K E + +D+ K PD + +MI Y G +KA + F M E+G +
Sbjct: 341 GKL----EACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPN 396
Query: 282 TVTYNSLM 289
TYNS++
Sbjct: 397 VFTYNSMI 404
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 73/169 (43%), Gaps = 3/169 (1%)
Query: 121 LVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSL 180
L + W Q + + +L+ + + G++ +++ M K+GYP + L
Sbjct: 134 LAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLL 193
Query: 181 MEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEK 240
+ G+ G + F + + F P +Y IL + + ++K + V+E +L+D
Sbjct: 194 ICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLED-- 251
Query: 241 SPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
PD +N++++ + G D+ + M + G TYN L+
Sbjct: 252 -GFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILL 299
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 13/202 (6%)
Query: 91 LSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYG 150
+S++KL + + ++ VR K+L + +IL + Q + F LI GY
Sbjct: 422 ISEKKLVEDIVCHNTLMHHFVRDKKLACAD---QILGSMLVQGL-SLDAISFGTLIDGYL 477
Query: 151 KLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAV 210
K G A ++ M K N+V S++ K G AEA+ M+ V
Sbjct: 478 KEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEI----KDIV 533
Query: 211 TYQLILKTFVQGDKFKEAEEVFETLL--DDEKSPLKPDQKMFNMMIYMYKKAGSYDKARK 268
TY +L ++ +EA+++ + D EKS FN+MI K GSY+KA++
Sbjct: 534 TYNTLLNESLKTGNVEEADDILSKMQKQDGEKSV---SLVTFNIMINHLCKFGSYEKAKE 590
Query: 269 TFALMAERGIEQSTVTYNSLMS 290
M ERG+ ++TY +L++
Sbjct: 591 VLKFMVERGVVPDSITYGTLIT 612
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 106/237 (44%), Gaps = 26/237 (10%)
Query: 59 NTVFKDAADEAEKKNWWKLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKK 118
+++ + + + ++++EQ G VSV L N +G L+ ++ +
Sbjct: 152 DSLVRACTQNGDAQGAYEVIEQTRAEGFCVSV---HALNN-------FMGCLLNVNEIDR 201
Query: 119 -WNLVIEI--LEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVV 175
W + E+ L ++ N + ++ ++I + K A V M K G PNVV
Sbjct: 202 FWKVYKEMDSLGYVENVNTFN-------LVIYSFCKESKLFEALSVFYRMLKCGVWPNVV 254
Query: 176 SQTSLMEAYGKGGRYNNAEAIFRRMQKFGP---EPSAVTYQLILKTFVQGDKFKEAEEVF 232
S +++ K G A + +M P+AVTY ++ F + + AE +
Sbjct: 255 SFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIR 314
Query: 233 ETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
++ KS + +++ + ++ Y +AGS D+A + M +G+ +TV YNS++
Sbjct: 315 GDMV---KSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIV 368
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 3/159 (1%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
++I K GD A + M G P+ V+ S+++ +GK GR ++ F M+
Sbjct: 267 IMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDM 326
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
EP +TY ++ F + K E + + + + LKP+ ++ ++ + K G
Sbjct: 327 CCEPDVITYNALINCFCKFGKLPIGLEFYREM---KGNGLKPNVVSYSTLVDAFCKEGMM 383
Query: 264 DKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIY 302
+A K + M G+ + TY SL+ +S+ +
Sbjct: 384 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAF 422
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ + K G A K M + G PN + TSL++A K G ++A + M + G
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
E + VTY ++ ++ KEAEE+F + + + + P+ +N +I+ + KA + D
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKM---DTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
+A + + RGI+ + Y + +
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFI 514
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 9/171 (5%)
Query: 122 VIEILEWLRNQSWWDFGKMD--FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTS 179
V ++L RN FG D F +LI LG A + + M + P S
Sbjct: 177 VFDVLWSTRNVCVPGFGVFDALFSVLI----DLGMLEEAIQCFSKMKRFRVFPKTRSCNG 232
Query: 180 LMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDE 239
L+ + K G+ ++ + F+ M G P+ TY +++ + + A +FE + +
Sbjct: 233 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM---K 289
Query: 240 KSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
L PD +N MI + K G D F M + E +TYN+L++
Sbjct: 290 FRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALIN 340
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 27/243 (11%)
Query: 60 TVFKDAADEAEK-KNWWKLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVR-FKQLK 117
T D +AE+ K +L ++D AG IP L+ F + K
Sbjct: 441 TALIDGLCDAERMKEAEELFGKMDTAG--------------VIPNLASYNALIHGFVKAK 486
Query: 118 KWNLVIEILEWLRNQSWWDFGKMDFIM---LITGYGKLGDFNGAEKVLALMNKNGYPPNV 174
+ +E+L L+ + K D ++ I G L A+ V+ M + G N
Sbjct: 487 NMDRALELLNELKGRGI----KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANS 542
Query: 175 VSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFET 234
+ T+LM+AY K G + M++ E + VT+ +++ + +A + F
Sbjct: 543 LIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR 602
Query: 235 LLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETN 294
+ +D L+ + +F MI K + A F M ++G+ Y SLM + N
Sbjct: 603 ISND--FGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLM--DGN 658
Query: 295 YKE 297
+K+
Sbjct: 659 FKQ 661
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 75/150 (50%), Gaps = 4/150 (2%)
Query: 142 FIMLITGYGKLGDFNG-AEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRM 200
+ LI+ YG+ + A M K G P+ S T+L+ AY G + A A F M
Sbjct: 452 YTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEM 511
Query: 201 QKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKA 260
K G +PS TY +L F + + E+++ +L ++ +K + +N ++ + K
Sbjct: 512 CKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREK---IKGTRITYNTLLDGFAKQ 568
Query: 261 GSYDKARKTFALMAERGIEQSTVTYNSLMS 290
G Y +AR + ++ G++ S +TYN LM+
Sbjct: 569 GLYIEARDVVSEFSKMGLQPSVMTYNMLMN 598
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 6/127 (4%)
Query: 165 MNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDK 224
M K G N + +LM+AY K E +F M+ G +PSA TY +++ + +
Sbjct: 370 MEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYAR--- 426
Query: 225 FKEAEEVFETLLDD-EKSPLKPDQKMFNMMIYMYKKAGSY-DKARKTFALMAERGIEQST 282
+ ++ ETLL + E L+P+ K + +I Y + D A F M + G++ S+
Sbjct: 427 -RMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSS 485
Query: 283 VTYNSLM 289
+Y +L+
Sbjct: 486 HSYTALI 492
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%)
Query: 139 KMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFR 198
++ + L+ G+ K G + A V++ +K G P+V++ LM AY +GG+ + +
Sbjct: 555 RITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLK 614
Query: 199 RMQKFGPEPSAVTYQLILKTFVQGDKFKEA 228
M +P ++TY ++ FV+ FK A
Sbjct: 615 EMAALNLKPDSITYSTMIYAFVRVRDFKRA 644
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 87 AVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIM-- 144
A S+L + K K +P +++ +K+ N+ I L+++ D M+ +
Sbjct: 287 ANSLLREMKEKKLCVPSQETYTSVI-LASVKQGNMDDAI--RLKDEMLSDGISMNVVAAT 343
Query: 145 -LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
LITG+ K D A + M K G PN V+ + L+E + K G A +++M+
Sbjct: 344 SLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVL 403
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEA----EEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
G PS I++ +++G K +EA +E FET L + + N ++ K
Sbjct: 404 GLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL--------ANVFVCNTILSWLCK 455
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLM 289
G D+A + + M RGI + V+YN++M
Sbjct: 456 QGKTDEATELLSKMESRGIGPNVVSYNNVM 485
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 6/184 (3%)
Query: 106 VIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALM 165
+I L + Q K E+L + + M + +I G+ K G+ + A M
Sbjct: 554 IINGLCKVGQTSKAR---ELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEM 610
Query: 166 NKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKF 225
NG PNV++ TSLM K R + A + M+ G + Y ++ F +
Sbjct: 611 CGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNM 670
Query: 226 KEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTY 285
+ A +F LL++ L P Q ++N +I ++ G+ A + M + G+ TY
Sbjct: 671 ESASALFSELLEE---GLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTY 727
Query: 286 NSLM 289
+L+
Sbjct: 728 TTLI 731
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 75/146 (51%), Gaps = 3/146 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI+G+ LG+ A + M K+G ++ + T+L++ K G A ++ MQ G
Sbjct: 695 LISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVG 754
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P + Y +I+ + +F + ++FE + +K+ + P+ ++N +I + + G+ D
Sbjct: 755 LVPDEIIYTVIVNGLSKKGQFVKVVKMFEEM---KKNNVTPNVLIYNAVIAGHYREGNLD 811
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
+A + M ++GI T++ L+S
Sbjct: 812 EAFRLHDEMLDKGILPDGATFDILVS 837
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Query: 145 LITGYGKLGDFNGAEKVLA-LMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
+I G K+G + A ++LA ++ + + +S S+++ + K G ++A A + M
Sbjct: 554 IINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGN 613
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
G P+ +TY ++ + ++ +A E+ + + + +K D + +I + K +
Sbjct: 614 GISPNVITYTSLMNGLCKNNRMDQALEMRDEM---KNKGVKLDIPAYGALIDGFCKRSNM 670
Query: 264 DKARKTFALMAERGIEQSTVTYNSLMS 290
+ A F+ + E G+ S YNSL+S
Sbjct: 671 ESASALFSELLEEGLNPSQPIYNSLIS 697
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 5/143 (3%)
Query: 168 NGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKE 227
NG+ PN + +L+ AYG+ ++A AI+R M++ G + + Y +L E
Sbjct: 344 NGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDE 403
Query: 228 AEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNS 287
A E+F+ + + E PD F+ +I +Y +G +A M E G E + S
Sbjct: 404 AFEIFQDMKNCETC--DPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTS 461
Query: 288 LMSFETNYKEVSNI---YDQILK 307
++ K+V ++ +DQ+L+
Sbjct: 462 VIQCYGKAKQVDDVVRTFDQVLE 484
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/215 (19%), Positives = 96/215 (44%), Gaps = 7/215 (3%)
Query: 91 LSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIM--LITG 148
L DE L+ P + T++ ++ + +EW S + + M +I
Sbjct: 197 LFDEMLERGIKPDNATFTTIISCA--RQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDA 254
Query: 149 YGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPS 208
YG+ G+ + A + + + V+ ++L+ YG G Y+ I+ M+ G +P+
Sbjct: 255 YGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPN 314
Query: 209 AVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARK 268
V Y ++ + + + +A+ +++ L+ + P+ + ++ Y +A D A
Sbjct: 315 LVIYNRLIDSMGRAKRPWQAKIIYKDLITNG---FTPNWSTYAALVRAYGRARYGDDALA 371
Query: 269 TFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYD 303
+ M E+G+ + + YN+L+S + + V ++
Sbjct: 372 IYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFE 406
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 82/182 (45%), Gaps = 3/182 (1%)
Query: 108 GTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNK 167
L+ L++W W++++S + + + + + F E++ M K
Sbjct: 155 NALLVLNSLREWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVK 214
Query: 168 NGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKE 227
+G + ++ ++++ + YN A F RM K G P VTY IL + + K +E
Sbjct: 215 DGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEE 274
Query: 228 AEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNS 287
++E + + KPD F+++ M+ +AG YD R M ++ + V YN+
Sbjct: 275 VLSLYERAV---ATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNT 331
Query: 288 LM 289
L+
Sbjct: 332 LL 333
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 82/200 (41%), Gaps = 33/200 (16%)
Query: 135 WDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAE 194
W + F +L +G+ GD++G VL M PNVV +L+EA G+ G+ A
Sbjct: 287 WKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLAR 346
Query: 195 AIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEA-------------------------- 228
++F M + G P+ T ++K + + ++A
Sbjct: 347 SLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMC 406
Query: 229 -----EEVFETLLDDEKSPL--KPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQS 281
EE E L +D K + +PD + M+ +Y G +KA + F M + G++ +
Sbjct: 407 ADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVN 466
Query: 282 TVTYNSLMSFETNYKEVSNI 301
+ L+ K + ++
Sbjct: 467 VMGCTCLVQCLGKAKRIDDV 486
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Query: 136 DFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEA 195
+ + + +IT + +N A + M K G P+ V+ +++++ Y K G+ +
Sbjct: 218 ELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLS 277
Query: 196 IFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIY 255
++ R G +P A+ + ++ K F + + V + + + +KP+ ++N ++
Sbjct: 278 LYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEM---KSMDVKPNVVVYNTLLE 334
Query: 256 MYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+AG AR F M E G+ + T +L+
Sbjct: 335 AMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALV 368
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 98/229 (42%), Gaps = 15/229 (6%)
Query: 77 LMEQIDQAGSA--VSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNL-VIEILEWLRNQS 133
L+E + +AG L +E L+ P + + LV+ +W +++ E ++ +
Sbjct: 332 LLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKK 391
Query: 134 WWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYP----PNVVSQTSLMEAYGKGGR 189
W MDFI+ T D E+ L N P+ S T+++ YG GG+
Sbjct: 392 W----PMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGK 447
Query: 190 YNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKM 249
A +F M K G + + + +++ + + + VF+ + K +KPD ++
Sbjct: 448 AEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSI---KRGVKPDDRL 504
Query: 250 FNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEV 298
++ + S + A K A + ER ++ N ++ +T Y+ V
Sbjct: 505 CGCLLSVMALCESSEDAEKVMACL-ERANKKLVTFVNLIVDEKTEYETV 552
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
+I GK G AE+ A M ++G P+ ++ ++ Y + GR + A + + K
Sbjct: 588 IIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHF 647
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
PS+ TY +++ FV+ ++ + + +L+D L P+ ++ +I + K G +
Sbjct: 648 LRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLED---GLSPNVVLYTALIGHFLKKGDFK 704
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
+ F LM E I+ + Y +L+S
Sbjct: 705 FSFTLFGLMGENDIKHDHIAYITLLS 730
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 16/212 (7%)
Query: 78 MEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDF 137
+++I +G A S S + ++ +D + F+Q+K+ R W +
Sbjct: 154 LDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKE-----------RGSGLWLW 202
Query: 138 GKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIF 197
+ G+G L + G L M + P N+ SL + K G AEA+F
Sbjct: 203 CCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYK--SLFYCFCKRGCAAEAEALF 260
Query: 198 RRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMY 257
M+ G V Y ++K + + + A ++ ++ E+S + D +FN +I+ +
Sbjct: 261 DHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMV--ERS-FELDPCIFNTLIHGF 317
Query: 258 KKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
K G DK R F+ M ++G++ + TY+ ++
Sbjct: 318 MKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMI 349
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 74/181 (40%), Gaps = 18/181 (9%)
Query: 125 ILEWLRNQSWWDFGK---------------MDFIMLITGYGKLGDFNGAEKVLALMNKNG 169
+L L NQ W+ G+ + + +LIT + G A +L LM + G
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 170 YPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAE 229
P+ S L+ A+ + GR + A M G P V Y +L T + K +A
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423
Query: 230 EVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
E+F L + P+ +N M +G +A M GI+ +TYNS++
Sbjct: 424 EIFGKL---GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMI 480
Query: 290 S 290
S
Sbjct: 481 S 481
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 102/218 (46%), Gaps = 7/218 (3%)
Query: 73 NWWKLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQ 132
N + M +ID A + + + T+ +++IG+L K +L +++L L +
Sbjct: 166 NGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLC---SRGKLDLALKVLNQLLSD 222
Query: 133 SWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNN 192
+ + + +LI G + A K++ M G P++ + +++ K G +
Sbjct: 223 NCQP-TVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR 281
Query: 193 AEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNM 252
A + R ++ G EP ++Y ++L+ + K++E E++ + ++ P+ +++
Sbjct: 282 AFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK---CDPNVVTYSI 338
Query: 253 MIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
+I + G ++A LM E+G+ +Y+ L++
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 376
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 5/146 (3%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI + + G + A + L M +G P++V+ +++ K G+ + A IF ++ + G
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Query: 205 PEPSAVTYQLILKTF-VQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
P++ +Y + GDK + + E + + + PD+ +N MI + G
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALHMILEMM----SNGIDPDEITYNSMISCLCREGMV 489
Query: 264 DKARKTFALMAERGIEQSTVTYNSLM 289
D+A + M S VTYN ++
Sbjct: 490 DEAFELLVDMRSCEFHPSVVTYNIVL 515
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 4/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G+ L + A +V+ ++ K G P+V + +L+ + K R ++A + RM+
Sbjct: 130 LIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD 188
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P VTY +++ + K A +V LL D +P + ++I G D
Sbjct: 189 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN---CQPTVITYTILIEATMLEGGVD 245
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
+A K M RG++ TYN+++
Sbjct: 246 EALKLMDEMLSRGLKPDMFTYNTII 270
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
+I G K G + A +++ + G P+V+S L+ A G++ E + +M
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+P+ VTY +++ T + K +EA + + + ++ L PD ++ +I + + G D
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLM---KEKGLTPDAYSYDPLIAAFCREGRLD 385
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
A + M G V YN++++
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVLA 411
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 90/177 (50%), Gaps = 9/177 (5%)
Query: 115 QLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKV---LALMNKNGYP 171
Q+++ + I ++E L+ + + + + MLI G D N AEKV L M K G
Sbjct: 523 QVRRDHDAIRVVEKLK-EGGFSLDLLAYNMLI---GLFCDKNNAEKVYEMLTDMEKEGKK 578
Query: 172 PNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEV 231
P+ ++ +L+ +GK + + E + +M++ G +P+ TY ++ + + EA ++
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Query: 232 FETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSL 288
F+ + S + P+ ++N++I + K G++ +A M + + + TYN+L
Sbjct: 639 FKDM--GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 94/216 (43%), Gaps = 12/216 (5%)
Query: 81 IDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWD---- 136
I + V + + K++ + ++I TL + +++ + +E+ E +R + D
Sbjct: 310 ISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDE---ALEVFEQMRGKRTDDGNVI 366
Query: 137 -FGKMDFIMLITGYGKLGDFNGAEKVLALMN-KNGYPPNVVSQTSLMEAYGKGGRYNNAE 194
+ F LI G K+G AE++L M + PN V+ L++ Y + G+ A+
Sbjct: 367 KADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAK 426
Query: 195 AIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMI 254
+ RM++ +P+ VT I+ + A F +D EK +K + + +I
Sbjct: 427 EVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFF---MDMEKEGVKGNVVTYMTLI 483
Query: 255 YMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
+ + +KA + M E G Y +L+S
Sbjct: 484 HACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 100/238 (42%), Gaps = 35/238 (14%)
Query: 96 LKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDF 155
+K +I + +I L + +LK+ E+L ++ + + + LI GY + G
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAE---ELLVRMKLEERCVPNAVTYNCLIDGYCRAGKL 422
Query: 156 NGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLI 215
A++V++ M ++ PNVV+ +++ + N A F M+K G + + VTY +
Sbjct: 423 ETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTL 482
Query: 216 LKTFVQGDKFKEAEEVFETLLDDEKSP--------------------------------L 243
+ ++A +E +L+ SP
Sbjct: 483 IHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF 542
Query: 244 KPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNI 301
D +NM+I ++ + +K + M + G + ++TYN+L+SF +K+ ++
Sbjct: 543 SLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESV 600
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/210 (18%), Positives = 92/210 (43%), Gaps = 7/210 (3%)
Query: 80 QIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGK 139
+++ A VS + ++++K + + ++G + R L N+ + + +
Sbjct: 421 KLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGL---NMAVVFFMDMEKEGVKG-NV 476
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+ ++ LI + + A M + G P+ +L+ + R ++A + +
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
+++ G + Y +++ F + AE+V+E L D EK KPD +N +I + K
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNN---AEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLM 289
++ + M E G++ + TY +++
Sbjct: 594 HKDFESVERMMEQMREDGLDPTVTTYGAVI 623
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 90/177 (50%), Gaps = 9/177 (5%)
Query: 115 QLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKV---LALMNKNGYP 171
Q+++ + I ++E L+ + + + + MLI G D N AEKV L M K G
Sbjct: 523 QVRRDHDAIRVVEKLK-EGGFSLDLLAYNMLI---GLFCDKNNAEKVYEMLTDMEKEGKK 578
Query: 172 PNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEV 231
P+ ++ +L+ +GK + + E + +M++ G +P+ TY ++ + + EA ++
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Query: 232 FETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSL 288
F+ + S + P+ ++N++I + K G++ +A M + + + TYN+L
Sbjct: 639 FKDM--GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 94/216 (43%), Gaps = 12/216 (5%)
Query: 81 IDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWD---- 136
I + V + + K++ + ++I TL + +++ + +E+ E +R + D
Sbjct: 310 ISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDE---ALEVFEQMRGKRTDDGNVI 366
Query: 137 -FGKMDFIMLITGYGKLGDFNGAEKVLALMN-KNGYPPNVVSQTSLMEAYGKGGRYNNAE 194
+ F LI G K+G AE++L M + PN V+ L++ Y + G+ A+
Sbjct: 367 KADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAK 426
Query: 195 AIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMI 254
+ RM++ +P+ VT I+ + A F +D EK +K + + +I
Sbjct: 427 EVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFF---MDMEKEGVKGNVVTYMTLI 483
Query: 255 YMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
+ + +KA + M E G Y +L+S
Sbjct: 484 HACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 79/189 (41%), Gaps = 32/189 (16%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI GY + G A++V++ M ++ PNVV+ +++ + N A F M+K G
Sbjct: 412 LIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG 471
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSP---------------------- 242
+ + VTY ++ ++A +E +L+ SP
Sbjct: 472 VKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAI 531
Query: 243 ----------LKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFE 292
D +NM+I ++ + +K + M + G + ++TYN+L+SF
Sbjct: 532 RVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFF 591
Query: 293 TNYKEVSNI 301
+K+ ++
Sbjct: 592 GKHKDFESV 600
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/210 (18%), Positives = 92/210 (43%), Gaps = 7/210 (3%)
Query: 80 QIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGK 139
+++ A VS + ++++K + + ++G + R L N+ + + +
Sbjct: 421 KLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGL---NMAVVFFMDMEKEGVKG-NV 476
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+ ++ LI + + A M + G P+ +L+ + R ++A + +
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
+++ G + Y +++ F + AE+V+E L D EK KPD +N +I + K
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNN---AEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLM 289
++ + M E G++ + TY +++
Sbjct: 594 HKDFESVERMMEQMREDGLDPTVTTYGAVI 623
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 7/210 (3%)
Query: 79 EQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFG 138
+I+ A + L + K++ + + +I ++L + + E+L+ + +
Sbjct: 586 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV----TPFGPN 641
Query: 139 KMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFR 198
+ +LI K D +GA ++ ++M + G PN V+ LM+ + K + +F
Sbjct: 642 TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 701
Query: 199 RMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYK 258
MQ+ G PS V+Y +I+ + + EA +F +D + L PD + ++I Y
Sbjct: 702 EMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAID---AKLLPDVVAYAILIRGYC 758
Query: 259 KAGSYDKARKTFALMAERGIEQSTVTYNSL 288
K G +A + M G++ + +L
Sbjct: 759 KVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 97/233 (41%), Gaps = 51/233 (21%)
Query: 102 PKDLVI-GTLVRFKQLKKWNLVIEILEW---LRNQSWWDFGKMDFIMLITGYGKLGDFNG 157
P D+VI G LV L K L++ + + + QS + F LI G+ +L F+
Sbjct: 458 PPDVVIYGVLV--DGLSKQGLMLHAMRFSVKMLGQSIR-LNVVVFNSLIDGWCRLNRFDE 514
Query: 158 AEKVLALMNKNGYPPNVVSQTSLM------EAYGK------------------------- 186
A KV LM G P+V + T++M +A+ K
Sbjct: 515 ALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAV 574
Query: 187 ----------GGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLL 236
R +A F + + EP VTY ++ + + EAE +FE L
Sbjct: 575 CNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL- 633
Query: 237 DDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+ +P P+ ++I++ K D A + F++MAE+G + + VTY LM
Sbjct: 634 --KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLM 684
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 6/153 (3%)
Query: 158 AEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILK 217
A ++L+L+ G PNVV+ +L+ + K G + A +F+ M++ G EP + Y ++
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 218 TFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERG 277
+ + ++F L +K D +F+ I +Y K+G A + M +G
Sbjct: 330 GYFKAGMLGMGHKLFSQAL---HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 278 IEQSTVTYNSL---MSFETNYKEVSNIYDQILK 307
I + VTY L + + E +Y QILK
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK 419
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 139 KMDFIML---ITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEA 195
K+D ++ I Y K GD A V M G PNVV+ T L++ + GR A
Sbjct: 353 KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFG 412
Query: 196 IFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIY 255
++ ++ K G EPS VTY ++ F + + ++E ++ K PD ++ +++
Sbjct: 413 MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI---KMGYPPDVVIYGVLVD 469
Query: 256 MYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
K G A + M + I + V +NSL+
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 9/148 (6%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI GY K G K+ + G +VV +S ++ Y K G A +++RM G
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ VTY +++K Q + EA ++ +L K ++P ++ +I + K G+
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQIL---KRGMEPSIVTYSSLIDGFCKCGNL- 442
Query: 265 KARKTFAL---MAERGIEQSTVTYNSLM 289
R FAL M + G V Y L+
Sbjct: 443 --RSGFALYEDMIKMGYPPDVVIYGVLV 468
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 76/151 (50%), Gaps = 3/151 (1%)
Query: 139 KMDFIMLITGYGKLGDFNGAEKVLALMNKN-GYPPNVVSQTSLMEAYGKGGRYNNAEAIF 197
++ + +L+ GY K + AE +L M ++ G P+VVS +++ A A F
Sbjct: 487 RITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFF 546
Query: 198 RRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMY 257
M+ G P+ ++Y ++K F + K A VF+ +++D + +K D +NM++ Y
Sbjct: 547 NEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPR--VKVDLIAWNMLVEGY 604
Query: 258 KKAGSYDKARKTFALMAERGIEQSTVTYNSL 288
+ G + A++ + M E G + TY SL
Sbjct: 605 CRLGLIEDAQRVVSRMKENGFYPNVATYGSL 635
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 82/172 (47%), Gaps = 10/172 (5%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALM----NKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIF 197
+ L+ GY K G ++L M ++N +P + V+ T+++ A+ G + A +
Sbjct: 417 YTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHP-DEVTYTTVVSAFVNAGLMDRARQVL 475
Query: 198 RRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMY 257
M + G + +TY ++LK + + + AE++ + +D + ++PD +N++I
Sbjct: 476 AEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTED--AGIEPDVVSYNIIIDGC 533
Query: 258 KKAGSYDKARKTFALMAERGIEQSTVTYNSLM---SFETNYKEVSNIYDQIL 306
A F M RGI + ++Y +LM + K + ++D+++
Sbjct: 534 ILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMM 585
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 22/150 (14%)
Query: 139 KMDFI---MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEA 195
K+D I ML+ GY +LG A++V++ M +NG+ PNV + SL + + +A
Sbjct: 591 KVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALL 650
Query: 196 IFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIY 255
+++ ++ E AV K+ E ++ D LKPD+ + + +
Sbjct: 651 LWKEIK----ERCAV---------------KKKEAPSDSSSDPAPPMLKPDEGLLDTLAD 691
Query: 256 MYKKAGSYDKARKTFALMAERGIEQSTVTY 285
+ +A + KA + A M E GI + Y
Sbjct: 692 ICVRAAFFKKALEIIACMEENGIPPNKTKY 721
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 3/132 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F +L + +F + L M + G+ P++V+ +L+ +Y + GR A +++ M
Sbjct: 239 FNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMY 298
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ P VTY ++K + + +EA + F ++D +KPD +N +IY Y K G
Sbjct: 299 RRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVD---RGIKPDCMSYNTLIYAYCKEG 355
Query: 262 SYDKARKTFALM 273
+++K M
Sbjct: 356 MMQQSKKLLHEM 367
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 122 VIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLM 181
V +L ++ WD + F ML+ GY KLG +V + +G+ +VV+ L+
Sbjct: 151 VFRVLVSATDECNWD--PVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLL 208
Query: 182 EAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKS 241
K + ++ M + G P+ T+ ++ F F+E ++ E + E+
Sbjct: 209 NGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKM---EEE 265
Query: 242 PLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+PD +N ++ Y + G +A + +M R + VTY SL+
Sbjct: 266 GFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLI 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 160 KVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTF 219
+V ++M + G PN + L + + + +M++ G EP VTY ++ ++
Sbjct: 222 QVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSY 281
Query: 220 VQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIE 279
+ + KEA +++ + + + PD + +I K G +A +TF M +RGI+
Sbjct: 282 CRRGRLKEAFYLYKIMY---RRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIK 338
Query: 280 QSTVTYNSLM 289
++YN+L+
Sbjct: 339 PDCMSYNTLI 348
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 7/155 (4%)
Query: 151 KLGDFNGAEKVLALMNKNGYPPNVVSQTS----LMEAYGKGGRYNNAEAIFRRMQKFGPE 206
K+G N EK L + + P TS L++ YGK GR N+A +F M K G
Sbjct: 278 KVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVP 337
Query: 207 PSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKA 266
VT+ ++ T EAE + + + E+ + PD K +N+++ ++ AG + A
Sbjct: 338 IDTVTFNTMIHTCGTHGHLSEAESLLKKM---EEKGISPDTKTYNILLSLHADAGDIEAA 394
Query: 267 RKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNI 301
+ + + + G+ TVT+ +++ K V+ +
Sbjct: 395 LEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEV 429
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 92/229 (40%), Gaps = 36/229 (15%)
Query: 96 LKNQ-TIPKDLVIGTLVRFKQLKKWNLVIEILEWLRN--QSWWDFGKMDFIMLITGYGKL 152
+KNQ T P + +L F+ L +LV E L S G + +I Y +L
Sbjct: 541 MKNQGTWPDECTYNSL--FQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRL 598
Query: 153 GDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTY 212
G + A + M K G PN V SL+ + + G A FR M++ G + + +
Sbjct: 599 GLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVL 658
Query: 213 QLILKTFVQGDKFKEAEEVFETLLDDEKSP-----------------LKPDQKMFN---- 251
++K + + +EA V++ + D E P + + +FN
Sbjct: 659 TSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALRE 718
Query: 252 ----------MMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
M+Y+YK G D+A + M E G+ ++N +M+
Sbjct: 719 KGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMA 767
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 85/179 (47%), Gaps = 6/179 (3%)
Query: 130 RNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGR 189
RN S +++ ++I YGK A + M G P+ + SL +
Sbjct: 506 RNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDL 565
Query: 190 YNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKM 249
+ A+ I M G +P TY ++ ++V+ +A +++E + EK+ +KP++ +
Sbjct: 566 VDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAM---EKTGVKPNEVV 622
Query: 250 FNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNY---KEVSNIYDQI 305
+ +I + ++G ++A + F +M E G++ + + SL+ + +E +YD++
Sbjct: 623 YGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKM 681
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F LI YGK G N A + + M K+G P + V+ +++ G G + AE++ ++M+
Sbjct: 308 FNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKME 367
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYM 256
+ G P TY ++L + A E + + K L PD ++++
Sbjct: 368 EKGISPDTKTYNILLSLHADAGDIEAALEYYRKI---RKVGLFPDTVTHRAVLHI 419
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 28/178 (15%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L +GY LG A V+ M + G PNVVS T++ K G + NA +F +MQ+ G
Sbjct: 332 LASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEG 391
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEV--------------FETLLDD---EKSPLKPDQ 247
P+A T +LK +EV T L D + L+
Sbjct: 392 VGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAI 451
Query: 248 KMF-----------NMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETN 294
++F N M+ Y G ++ F++M E G+E +T+ S++S N
Sbjct: 452 EIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKN 509
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 130 RNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGR 189
RN S W+ +++ Y KLG + A +L M G P++V+ SL+ Y G
Sbjct: 153 RNLSSWN-------SILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGL 205
Query: 190 YNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKM 249
+A A+ +RMQ G +PS + +L+ + K + + +L ++ L D +
Sbjct: 206 SKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYIL---RNQLWYDVYV 262
Query: 250 FNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
+I MY K G AR F +M + I V +NSL+S
Sbjct: 263 ETTLIDMYIKTGYLPYARMVFDMMDAKNI----VAWNSLVS 299
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 129 LRNQSWWDFGKMDFI--MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGK 186
LRNQ W+D ++ LI Y K G A V +M+ N+V+ SL+
Sbjct: 252 LRNQLWYDV----YVETTLIDMYIKTGYLPYARMVFDMMD----AKNIVAWNSLVSGLSY 303
Query: 187 GGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPD 246
+AEA+ RM+K G +P A+T+ + + K ++A +V + ++ + P+
Sbjct: 304 ACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKM---KEKGVAPN 360
Query: 247 QKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+ + K G++ A K F M E G+ + T ++L+
Sbjct: 361 VVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 13/165 (7%)
Query: 111 VRFKQLKKWNLVIEILEWLRNQSWWDFG----KMDFIMLITGYGKLGDFNGAEKVLALMN 166
V F L K V E E L Q D G +++ LI GY G A ++ M
Sbjct: 393 VAFDALSKLGRVEEAFELL--QEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI 450
Query: 167 KNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFK 226
NG P++++ L+ + G I+ RM+ GP+P+AVT +I++ K K
Sbjct: 451 GNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVK 510
Query: 227 EAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFA 271
EAE+ F +L ++K P ++ F + Y +AG KA K F
Sbjct: 511 EAEDFFSSL--EQKCP--ENKASF---VKGYCEAGLSKKAYKAFV 548
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
+I + KL + A+ + M + G P++ + T ++ Y + AE++F M++ G
Sbjct: 597 MIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRG 656
Query: 205 PEPSAVTYQLILKTF------------VQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNM 252
+P VTY ++L + VQG+ K E L + + + D + +
Sbjct: 657 IKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKAS--EVLREFSAAGIGLDVVCYTV 714
Query: 253 MIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
+I K + ++A + F M + G+E V Y +L+S
Sbjct: 715 LIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLIS 752
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 7/154 (4%)
Query: 136 DFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEA 195
+F ++ + +LI G+ K G A + M ++G+ S L+E Y K G +++A
Sbjct: 270 EFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWG 329
Query: 196 IFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIY 255
+ M G P+ TY + + + +A E+ ++ PD +N +++
Sbjct: 330 VTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM-------AAPDVVSYNTLMH 382
Query: 256 MYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
Y K G + +A F + I S VTYN+L+
Sbjct: 383 GYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLI 416
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 146 ITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGP 205
I G K+G+ A + + + G P+ V+ T+++ Y + G++ A ++ M +
Sbjct: 522 IDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRL 581
Query: 206 EPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDK 265
PS +TY +++ + + ++A F+ + +K ++P+ N ++Y KAG+ D+
Sbjct: 582 YPSVITYFVLIYGHAKAGRLEQA---FQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDE 638
Query: 266 ARKTFALMAERGIEQSTVTYNSLMSFETNY---KEVSNIYDQIL 306
A + M E GI + +Y L+S ++ +EV +Y ++L
Sbjct: 639 AYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEML 682
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 74/144 (51%), Gaps = 4/144 (2%)
Query: 147 TGYGKLGDFNGAEKVLA-LMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGP 205
G +LGD + A ++ ++ + + P++ ++ K G A R++ + G
Sbjct: 487 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL 546
Query: 206 EPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDK 265
P VTY +++ +++ +FK A +++ +L + L P + ++IY + KAG ++
Sbjct: 547 VPDHVTYTTVIRGYLENGQFKMARNLYDEML---RKRLYPSVITYFVLIYGHAKAGRLEQ 603
Query: 266 ARKTFALMAERGIEQSTVTYNSLM 289
A + M +RG+ + +T+N+L+
Sbjct: 604 AFQYSTEMKKRGVRPNVMTHNALL 627
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Query: 156 NGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLI 215
N A V M ++G P V++ +++++ K G + I+ M++ E S VTY ++
Sbjct: 220 NKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNIL 279
Query: 216 LKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAE 275
+ F + K +EA D +S FN +I Y K G +D A M
Sbjct: 280 INGFSKNGKMEEARRFHG---DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLN 336
Query: 276 RGIEQSTVTYN 286
GI +T TYN
Sbjct: 337 AGIYPTTSTYN 347
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 52/103 (50%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+ + +LI G+ K G A + M K G PNV++ +L+ K G + A +
Sbjct: 586 ITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCK 645
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSP 242
M++ G P+ +Y +++ +K++E ++++ +LD E P
Sbjct: 646 MEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEP 688
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 7/208 (3%)
Query: 82 DQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMD 141
D A +S+++D L +I +L + K++++ + + LE Q + +
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLE----QKGVNPNVVM 534
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ LI GY K G + A +L M PN ++ +L+ G+ A + +M
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV 594
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
K G +P+ T +++ ++ F A F+ +L S KPD + I Y + G
Sbjct: 595 KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML---SSGTKPDAHTYTTFIQTYCREG 651
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
A A M E G+ TY+SL+
Sbjct: 652 RLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 3/149 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ LI GY + D + A KV M G N V+ T L+ R + A +F +M+
Sbjct: 256 YTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMK 315
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
P+ TY +++K+ ++ EA + + + E++ +KP+ + ++I
Sbjct: 316 DDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM---EETGIKPNIHTYTVLIDSLCSQC 372
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMS 290
++KAR+ M E+G+ + +TYN+L++
Sbjct: 373 KFEKARELLGQMLEKGLMPNVITYNALIN 401
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 4/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI GY K + + A VL M + P+VV+ SL++ + G +++A + M G
Sbjct: 434 LIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG 492
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P TY ++ + + + +EA ++F++L E+ + P+ M+ +I Y KAG D
Sbjct: 493 LVPDQWTYTSMIDSLCKSKRVEEACDLFDSL---EQKGVNPNVVMYTALIDGYCKAGKVD 549
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
+A M + +++T+N+L+
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALI 574
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G + G+F+ A ++L+LMN G P+ + TS++++ K R A +F +++ G
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ V Y ++ + + K EA + E +L K+ L P+ FN +I+ G
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKML--SKNCL-PNSLTFNALIHGLCADGKLK 584
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
+A M + G+ Q TV+ ++++
Sbjct: 585 EATLLEEKMVKIGL-QPTVSTDTIL 608
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 19/184 (10%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ I Y + G AE ++A M +NG P++ + +SL++ YG G+ N A + +RM+
Sbjct: 640 YTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMR 699
Query: 202 KFGPEPSAVTYQLILKTFVQ---------------GDKFKEAEEVFETLLDDEKSPLKPD 246
G EPS T+ ++K ++ E + V E L + + P+
Sbjct: 700 DTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPN 759
Query: 247 QKMFNMMIYMYKKAGSYDKARKTFALMA-ERGIEQSTVTYNSLMSFETNYK---EVSNIY 302
K + +I + G+ A K F M GI S + +N+L+S K E + +
Sbjct: 760 AKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVV 819
Query: 303 DQIL 306
D ++
Sbjct: 820 DDMI 823
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 11/149 (7%)
Query: 165 MNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDK 224
M + G PN+ + T L+++ ++ A + +M + G P+ +TY ++ + +
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408
Query: 225 FKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVT 284
++A +V E + E L P+ + +N +I Y K+ + KA M ER + VT
Sbjct: 409 IEDAVDVVELM---ESRKLSPNTRTYNELIKGYCKSNVH-KAMGVLNKMLERKVLPDVVT 464
Query: 285 YNSLM-------SFETNYKEVSNIYDQIL 306
YNSL+ +F++ Y+ +S + D+ L
Sbjct: 465 YNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 3/150 (2%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+ F LI G G A + M K G P V + T L+ K G +++A + F++
Sbjct: 568 LTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQ 627
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M G +P A TY ++T+ + + +AE++ + ++ S PD ++ +I Y
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVS---PDLFTYSSLIKGYGD 684
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLM 289
G + A M + G E S T+ SL+
Sbjct: 685 LGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 85/190 (44%), Gaps = 27/190 (14%)
Query: 113 FKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPP 172
F+++K+ LV ++ + +++ + K G A K M + G P
Sbjct: 506 FEEMKRGGLVADVYTY--------------TIMVDSFCKAGLIEQARKWFNEMREVGCTP 551
Query: 173 NVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVF 232
NVV+ T+L+ AY K + + A +F M G P+ VTY ++ + + ++A ++F
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 611
Query: 233 ETLLDDEKSP-------------LKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIE 279
E + + P +P+ + ++ + K+ ++ARK M+ G E
Sbjct: 612 ERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCE 671
Query: 280 QSTVTYNSLM 289
+ + Y++L+
Sbjct: 672 PNQIVYDALI 681
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 3/142 (2%)
Query: 158 AEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILK 217
AEK + M G N ++ +S G+Y A ++ R M G P TY +L
Sbjct: 432 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 491
Query: 218 TFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERG 277
K + A +FE + ++ L D + +M+ + KAG ++ARK F M E G
Sbjct: 492 YLCNASKMELAFLLFEEM---KRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548
Query: 278 IEQSTVTYNSLMSFETNYKEVS 299
+ VTY +L+ K+VS
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVS 570
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ G+ K A K+L M+ G PN + +L++ K G+ + A+ + M + G
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+ TY ++ + + + A +V +L++ + P+ ++ MI K G D
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA---PNVVIYTEMIDGLCKVGKTD 761
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
+A K +M E+G + + VTY +++
Sbjct: 762 EAYKLMQMMEEKGCQPNVVTYTAMI 786
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G K+G + A++V M+++G+P + + +SL++ Y K R + A + +M +
Sbjct: 680 LIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 739
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ V Y ++ + K EA ++ + + E+ +P+ + MI + G +
Sbjct: 740 CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM---EEKGCQPNVVTYTAMIDGFGMIGKIE 796
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
+ M +G+ + VTY L+
Sbjct: 797 TCLELLERMGSKGVAPNYVTYRVLI 821
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 110/255 (43%), Gaps = 19/255 (7%)
Query: 62 FKDAADEAEKKN---WWKLME------QIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVR 112
FK D +E+ N + L++ ++++A + +S E + I D +I L +
Sbjct: 627 FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 686
Query: 113 FKQLKKWNLV-IEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYP 171
+L + V E+ E + + + LI Y K+ + A KVL+ M +N
Sbjct: 687 VGKLDEAQEVKTEMSEHGFPATLYTYSS-----LIDRYFKVKRQDLASKVLSKMLENSCA 741
Query: 172 PNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEV 231
PNVV T +++ K G+ + A + + M++ G +P+ VTY ++ F K + E+
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL 801
Query: 232 FETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM-S 290
E + + P+ + ++I K G+ D A M + T Y ++
Sbjct: 802 LERM---GSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEG 858
Query: 291 FETNYKEVSNIYDQI 305
F + E + D+I
Sbjct: 859 FNKEFIESLGLLDEI 873
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 66/123 (53%), Gaps = 7/123 (5%)
Query: 167 KNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFK 226
+ G+ P++V +T+L++ YG+ G+ +AE IF RM E + +++ I+ +VQ K
Sbjct: 358 RRGFLPHMVLETALIDMYGECGQLKSAEVIFDRM----AEKNVISWNSIIAAYVQNGKNY 413
Query: 227 EAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYN 286
A E+F+ L D S L PD ++ Y ++ S + R+ A + + +T+ N
Sbjct: 414 SALELFQELWD---SSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILN 470
Query: 287 SLM 289
SL+
Sbjct: 471 SLV 473
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 70/157 (44%), Gaps = 3/157 (1%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F L+ G+ K + A + M K G PN+ L+ + K G A + M+
Sbjct: 307 FGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEME 366
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
P TY +++ D+ EA +F+ + ++ + P +N +I+ Y K
Sbjct: 367 SLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER---IFPSSATYNSLIHGYCKEY 423
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEV 298
+ ++A + M G+E + +T+++L+ N +++
Sbjct: 424 NMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDI 460
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ +L K G ++ EK+L M G PNV T + + + AE +F M+
Sbjct: 202 YFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMK 261
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
K G P+ TY ++ + + ++A +++ +L E L P+ +F ++ + KA
Sbjct: 262 KHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAE---LLPNVVVFGTLVDGFCKAR 318
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
AR F M + G++ + YN L+
Sbjct: 319 ELVTARSLFVHMVKFGVDPNLYVYNCLI 346
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 96/196 (48%), Gaps = 15/196 (7%)
Query: 101 IPKDLVIGTLVR-FKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAE 159
+P + TLV QL K + V +++ L ++ + +F + + I GY F G
Sbjct: 204 VPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGF-EFDCVFYSNWIHGY-----FKGGA 257
Query: 160 KVLALMN-----KNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQL 214
V ALM + G +VVS + L++ K G A + +M K G EP+ +TY
Sbjct: 258 LVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTA 317
Query: 215 ILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMA 274
I++ + K +EA +F +L ++ D+ ++ +I + G+ ++A M
Sbjct: 318 IIRGLCKMGKLEEAFVLFNRIL---SVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDME 374
Query: 275 ERGIEQSTVTYNSLMS 290
+RGI+ S +TYN++++
Sbjct: 375 QRGIQPSILTYNTVIN 390
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 69/148 (46%), Gaps = 8/148 (5%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
++ LI G + G+ N A +L M + G P++++ +++ GR + A+ + +
Sbjct: 350 YVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSK--- 406
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G +TY +L ++++ E+ L + K P+ D M N+++ + G
Sbjct: 407 --GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFL-EAKIPM--DLVMCNILLKAFLLMG 461
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
+Y +A + M E + T TY +++
Sbjct: 462 AYGEADALYRAMPEMDLTPDTATYATMI 489
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 89/177 (50%), Gaps = 9/177 (5%)
Query: 115 QLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKV---LALMNKNGYP 171
Q+++ + I ++E L+ + + + + MLI G D N EKV L M K G
Sbjct: 523 QVRRDHDAIRVVEKLK-EGGFSLDLLAYNMLI---GLFCDKNNTEKVYEMLTDMEKEGKK 578
Query: 172 PNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEV 231
P+ ++ +L+ +GK + + E + +M++ G +P+ TY ++ + + EA ++
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Query: 232 FETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSL 288
F+ + S + P+ ++N++I + K G++ +A M + + + TYN+L
Sbjct: 639 FKDM--GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 94/216 (43%), Gaps = 12/216 (5%)
Query: 81 IDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWD---- 136
I + V + + K++ + ++I TL + +++ + +E+ E +R + D
Sbjct: 310 ISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDE---ALEVFEKMRGKRTDDGNVI 366
Query: 137 -FGKMDFIMLITGYGKLGDFNGAEKVLALMN-KNGYPPNVVSQTSLMEAYGKGGRYNNAE 194
+ F LI G K+G AE++L M + PN V+ L++ Y + G+ A+
Sbjct: 367 KADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAK 426
Query: 195 AIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMI 254
+ RM++ +P+ VT I+ + A F +D EK +K + + +I
Sbjct: 427 EVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFF---MDMEKEGVKGNVVTYMTLI 483
Query: 255 YMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
+ + +KA + M E G Y +L+S
Sbjct: 484 HACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 100/238 (42%), Gaps = 35/238 (14%)
Query: 96 LKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDF 155
+K +I + +I L + +LK+ E+L ++ + + + LI GY + G
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAE---ELLVRMKLEERCAPNAVTYNCLIDGYCRAGKL 422
Query: 156 NGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLI 215
A++V++ M ++ PNVV+ +++ + N A F M+K G + + VTY +
Sbjct: 423 ETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTL 482
Query: 216 LKTFVQGDKFKEAEEVFETLLDDEKSP--------------------------------L 243
+ ++A +E +L+ SP
Sbjct: 483 IHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF 542
Query: 244 KPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNI 301
D +NM+I ++ + +K + M + G + ++TYN+L+SF +K+ ++
Sbjct: 543 SLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESV 600
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 6/132 (4%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ Y K G N A +V M + NV S TS+++ YGK G A +F RM++F
Sbjct: 314 LLDMYAKCGGINDARRVFDQMQEK----NVFSWTSMIDGYGKNGNPEEALELFTRMKEFR 369
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
EP+ VT+ L + E+FE++ D +KP + + ++ + +AG +
Sbjct: 370 IEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYS--MKPKMEHYACIVDLMGRAGDLN 427
Query: 265 KARKTFALMAER 276
KA + M ER
Sbjct: 428 KAFEFARAMPER 439
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 3/130 (2%)
Query: 158 AEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILK 217
A L M G PN+V+ + + Y G + ++ G +P +T+ LI+
Sbjct: 444 AAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIIN 503
Query: 218 TFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERG 277
+ + K+A + F+ +L+ ++P++ +N++I G D++ K FA M E G
Sbjct: 504 CLCRAKEIKDAFDCFKEMLE---WGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENG 560
Query: 278 IEQSTVTYNS 287
+ YN+
Sbjct: 561 LSPDLYAYNA 570
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 96 LKNQTIPKDLVIGTLVRFKQLK-KWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGD 154
K I L+I L R K++K ++ E+LEW + ++ + +LI GD
Sbjct: 491 FKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEW-----GIEPNEITYNILIRSCCSTGD 545
Query: 155 FNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQL 214
+ + K+ A M +NG P++ + + ++++ K + AE + + M + G +P TY
Sbjct: 546 TDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYST 605
Query: 215 ILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQ 247
++K + + EA E+F ++ E+ PD
Sbjct: 606 LIKALSESGRESEAREMFSSI---ERHGCVPDS 635
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 70/148 (47%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F ++GY GD VL + +G+ P+V++ + ++ + +A F+ M
Sbjct: 463 FNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEML 522
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
++G EP+ +TY +++++ + ++F + +++ L PD +N I + K
Sbjct: 523 EWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKM---KENGLSPDLYAYNATIQSFCKMR 579
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
KA + M G++ TY++L+
Sbjct: 580 KVKKAEELLKTMLRIGLKPDNFTYSTLI 607
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 85/164 (51%), Gaps = 5/164 (3%)
Query: 104 DLVIGTLVR-FKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVL 162
D ++ +V F + + + +++ EW + + G++ + + I Y +L +N AE +
Sbjct: 353 DCILCAIVNGFSKQRGFAEAVKVYEWAMKEEC-EAGQVTYAIAINAYCRLEKYNKAEMLF 411
Query: 163 ALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQG 222
M K G+ VV+ +++M+ YGK R ++A + +M++ G +P+ Y ++ +
Sbjct: 412 DEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRA 471
Query: 223 DKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKA 266
+ AE++++ + +++ + PD+ + MI Y ++ ++
Sbjct: 472 MDLRRAEKIWKEM---KRAKVLPDKVSYTSMISAYNRSKELERC 512
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 9/146 (6%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ GYGK+G+ + A +L +M + N VS T ++ Y K GR + A +F+RM
Sbjct: 188 LLAGYGKVGEMDEARSLLEMMP--CWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMEN 245
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
EP VT +L + E + + + + + N +I MY K+G+
Sbjct: 246 VEPDEVTLLAVLSACADLGSLELGERICSYV---DHRGMNRAVSLNNAVIDMYAKSGNIT 302
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
KA F + ER + VT+ ++++
Sbjct: 303 KALDVFECVNERNV----VTWTTIIA 324
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Query: 136 DFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEA 195
D G + +L+ G AE + + + V +L++A + G+ A
Sbjct: 736 DPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASE 795
Query: 196 IFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIY 255
I+ RM G S TY ++ + +G + +A E+F + +S L D+K++ MI
Sbjct: 796 IYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFS---NARRSGLYLDEKIYTNMIM 852
Query: 256 MYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
Y K G +A F+ M ++GI+ T +YN ++
Sbjct: 853 HYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMV 886
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 85/181 (46%), Gaps = 3/181 (1%)
Query: 111 VRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGY 170
V K+ + W V + W++ Q + + + +++ YG++G AE+ M + G
Sbjct: 160 VVLKEQRGWRQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGC 219
Query: 171 PPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEE 230
P+ V+ +++ Y + GR++ ++ +Q+ S Y +L + Q F +
Sbjct: 220 EPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSL-QKKSFH--GK 276
Query: 231 VFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
V + L+ + + P++ + +++ Y K G ++A K F M G VTY+S++S
Sbjct: 277 VIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVIS 336
Query: 291 F 291
Sbjct: 337 L 337
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 70/134 (52%), Gaps = 3/134 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
+I+ YG+ + A ++ + ++G + T+++ YGKGG+ + A ++F MQK G
Sbjct: 815 MISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKG 874
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+P +Y +++K E +E+ + + E++ D + +I +Y ++ +
Sbjct: 875 IKPGTPSYNMMVKICATSRLHHEVDELLQAM---ERNGRCTDLSTYLTLIQVYAESSQFA 931
Query: 265 KARKTFALMAERGI 278
+A KT L+ E+GI
Sbjct: 932 EAEKTITLVKEKGI 945
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 23/221 (10%)
Query: 70 EKKNWWKLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWL 129
E K LM + D SAV + VI + VR + K ++ +I+ L
Sbjct: 620 ETKAILNLMFKTDLGSSAV---------------NRVISSFVREGDVSKAEMIADIIIRL 664
Query: 130 RNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGR 189
+ LI YG+ A+++ ++ P V + S+++AY + G
Sbjct: 665 ----GLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESKTPGKSVIR-SMIDAYVRCGW 719
Query: 190 YNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKM 249
+A +F + G +P AVT +++ K +EAE + T L+ ++ D
Sbjct: 720 LEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKN---IELDTVG 776
Query: 250 FNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
+N +I +AG A + + M G+ S TYN+++S
Sbjct: 777 YNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMIS 817
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 94/200 (47%), Gaps = 6/200 (3%)
Query: 94 EKLKNQTI-PKDLVIGTLVR-FKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGK 151
E++K + P + GTL+ + ++++ + +E+LE ++ + + M F +I G G+
Sbjct: 274 EEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMK-MAEMEINFMVFNPIIDGLGE 332
Query: 152 LGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVT 211
G + A ++ P +V+ SL++ + K G A I + M G +P+ T
Sbjct: 333 AGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTT 392
Query: 212 YQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFA 271
Y K F + +K +E ++ L++ S PD+ +++++ M + G A +
Sbjct: 393 YNHFFKYFSKHNKTEEGMNLYFKLIEAGHS---PDRLTYHLILKMLCEDGKLSLAMQVNK 449
Query: 272 LMAERGIEQSTVTYNSLMSF 291
M RGI+ +T L+
Sbjct: 450 EMKNRGIDPDLLTTTMLIHL 469
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 3/141 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ + K GD GA K+L +M G P + + + K + ++ ++ + G
Sbjct: 361 LVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAG 420
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P +TY LILK + K A +V + + + + PD M+I++ + +
Sbjct: 421 HSPDRLTYHLILKMLCEDGKLSLAMQVNKEM---KNRGIDPDLLTTTMLIHLLCRLEMLE 477
Query: 265 KARKTFALMAERGIEQSTVTY 285
+A + F RGI +T+
Sbjct: 478 EAFEEFDNAVRRGIIPQYITF 498
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 93/207 (44%), Gaps = 7/207 (3%)
Query: 104 DLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLA 163
++++ L + +++ ++ +E + + +W ++ F +L+ G+ + AEK+
Sbjct: 216 EVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRI-FNILLNGWFRSRKLKQAEKLWE 274
Query: 164 LMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGD 223
M P VV+ +L+E Y + R A + M+ E + + + I+ +
Sbjct: 275 EMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAG 334
Query: 224 KFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTV 283
+ EA + E E P +N ++ + KAG A K +M RG++ +T
Sbjct: 335 RLSEALGMMERFFVCESGP---TIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTT 391
Query: 284 TYNSLMSFETNY---KEVSNIYDQILK 307
TYN + + + +E N+Y ++++
Sbjct: 392 TYNHFFKYFSKHNKTEEGMNLYFKLIE 418
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 3/142 (2%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
++I GYG+ GD + A VL LM G PNV + +L+ Y KGGR +A + M+
Sbjct: 410 VVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRST 469
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
P TY L+L + A ++++ +L + +PD + ++ G
Sbjct: 470 KIHPDTTTYNLLLGAACTLGHLRLAFQLYDEML---RRGCQPDIITYTELVRGLCWKGRL 526
Query: 264 DKARKTFALMAERGIEQSTVTY 285
KA + + GI V +
Sbjct: 527 KKAESLLSRIQATGITIDHVPF 548
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 4/189 (2%)
Query: 102 PKDLVIGTLVRFKQLKKWNLVIEILEWLR-NQSWWDFGKMDFIMLITGYGKLGDFNGAEK 160
P D+VI T++ K N+V + W +Q + + ++I G G+ A
Sbjct: 262 PLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYG 321
Query: 161 VLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFV 220
+ M K G P+V + +L+ A K G+++ A + MQ G P ++Y++I++
Sbjct: 322 FMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLC 381
Query: 221 QGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQ 280
A E ++ KS L P+ ++N++I Y + G A LM G++
Sbjct: 382 IHGDVNRANEFLLSM---LKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKP 438
Query: 281 STVTYNSLM 289
+ T N+L+
Sbjct: 439 NVYTNNALI 447
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 76/166 (45%), Gaps = 4/166 (2%)
Query: 128 WLRNQSWWDF---GKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAY 184
WLR + + G + L+ G K G A+ ++ M + G PN VS +L++
Sbjct: 142 WLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGL 201
Query: 185 GKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQ-GDKFKEAEEVFETLLDDEKSPL 243
+ A +F M K+G P+ VT +I+ Q G +++ E +LD ++
Sbjct: 202 CSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANA 261
Query: 244 KPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
D + +++ K G+ +A + + M+++ + +V YN ++
Sbjct: 262 PLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVII 307
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Query: 139 KMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFR 198
++ + ++I G GD N A + L M K+ P V+ +++ YG+ G ++A ++
Sbjct: 370 QISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLN 429
Query: 199 RMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYK 258
M +G +P+ T ++ +V+G + +A V + + + PD +N+++
Sbjct: 430 LMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEM---RSTKIHPDTTTYNLLLGAAC 486
Query: 259 KAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
G A + + M RG + +TY L+
Sbjct: 487 TLGHLRLAFQLYDEMLRRGCQPDIITYTELV 517
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 5/147 (3%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI KLG A V+ M G+ P+ V+ SLM Y G A + + M + G
Sbjct: 684 LIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAG 743
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKS-PLKPDQKMFNMMIYMYKKAGSY 263
P+ TY I++ KE ++ L + KS ++PD +N +I K G+
Sbjct: 744 ISPNVATYNTIIRGLSDAGLIKEVDK----WLSEMKSRGMRPDDFTYNALISGQAKIGNM 799
Query: 264 DKARKTFALMAERGIEQSTVTYNSLMS 290
+ + M G+ T TYN L+S
Sbjct: 800 KGSMTIYCEMIADGLVPKTSTYNVLIS 826
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 103/250 (41%), Gaps = 25/250 (10%)
Query: 59 NTVFKDAADEAEKKNWWKLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQL-- 116
NTV + ++ + ++ + G +L D N I +G VR K L
Sbjct: 165 NTVISGLCEHGLADEAYQFLSEMVKMG----ILPDTVSYNTLIDGFCKVGNFVRAKALVD 220
Query: 117 --KKWNLVIEIL------------EWLRNQ--SWWDFGKMDFIMLITGYGKLGDFNGAEK 160
+ NL+ + E R+ S +D + F +I K G
Sbjct: 221 EISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGL 280
Query: 161 VLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFV 220
+L M + PN V+ T+L+++ K Y +A A++ +M G V Y +++
Sbjct: 281 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 340
Query: 221 QGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQ 280
+ +EAE+ F+ LL+D + P+ + ++ KAG A M E+ +
Sbjct: 341 KAGDLREAEKTFKMLLEDNQV---PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIP 397
Query: 281 STVTYNSLMS 290
+ VTY+S+++
Sbjct: 398 NVVTYSSMIN 407
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 3/149 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ +L+ G K GD AEK ++ ++ PNVV+ T+L++ K G ++AE I +M
Sbjct: 332 YTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQML 391
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ P+ VTY ++ +V+ +EA + + E + P+ + +I KAG
Sbjct: 392 EKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM---EDQNVVPNGFTYGTVIDGLFKAG 448
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMS 290
+ A + M G+E++ ++L++
Sbjct: 449 KEEMAIELSKEMRLIGVEENNYILDALVN 477
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 3/148 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F +++ K GD G K+ M G P+++S ++ + G+ A I +M
Sbjct: 576 FNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMM 635
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
P+ TY++ L T K K A+ +F+T +K ++++N +I K G
Sbjct: 636 LMEIHPNLTTYRIFLDT---SSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLG 692
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
KA M RG TVT+NSLM
Sbjct: 693 MTKKAAMVMGDMEARGFIPDTVTFNSLM 720
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 74/146 (50%), Gaps = 2/146 (1%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
+I+ K ++ A K+ M K G PN+V+ +L+ + GK G+ ++ ++ G
Sbjct: 290 MISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLG 349
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+P T+ +L + +++++ ++F+ + + L ++ ++N + +K G ++
Sbjct: 350 HKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCL--NEYLYNTAMVSCQKLGYWE 407
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
KA K M G+ ST +YN ++S
Sbjct: 408 KAVKLLYEMEGSGLTVSTSSYNLVIS 433
>AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:1258581-1260265 FORWARD
LENGTH=532
Length = 532
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 104/256 (40%), Gaps = 45/256 (17%)
Query: 76 KLMEQIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWW 135
+L+ + SAV + K + ++ K + + +++K++ +EI EW+ Q
Sbjct: 66 RLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQEDI 125
Query: 136 DFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNV---VSQTSLMEAYGKGGRYNN 192
D+ + + K+ N AEK M P + + TSL+ +Y + +
Sbjct: 126 KLQAGDYAVHLDLISKIRGLNSAEKFFEDM-----PDQMRGHAACTSLLHSYVQNKLSDK 180
Query: 193 AEAIFRRMQKFG----------------------------------PEPSAVTYQLILKT 218
AEA+F +M + G P VTY L L
Sbjct: 181 AEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIRTSPDIVTYNLWLTA 240
Query: 219 FVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGI 278
F G+ + AE+V+ L ++ L PD ++++ +Y K + +KAR M +
Sbjct: 241 FASGNDVEGAEKVY---LKAKEEKLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVS 297
Query: 279 EQSTVTYNSLMSFETN 294
+++ V Y SL+S N
Sbjct: 298 KKNRVAYASLISLHAN 313
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 10/133 (7%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
+I G+ K + A+++L M G P+VV+ ++L+ Y K R +N IF M + G
Sbjct: 16 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 75
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG--S 262
+ VTY ++ F Q A+++ ++ + PD F+ M+ AG S
Sbjct: 76 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI---SCGVAPDYITFHCML-----AGLCS 127
Query: 263 YDKARKTFALMAE 275
+ RK FA++ +
Sbjct: 128 KKELRKAFAILED 140
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 3/137 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ LI GD +GA ++ M NG P VVS T+ M+ GR A +++ M
Sbjct: 160 YTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEML 219
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
+ P+ TY ++++ V K +EA ++F + ++ ++PD+ N++I K G
Sbjct: 220 RSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKM---QEIGVQPDKAACNILIAKALKFG 276
Query: 262 SYDKARKTFALMAERGI 278
+ M E G+
Sbjct: 277 ETSFMTRVLVYMKENGV 293
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 71/158 (44%), Gaps = 3/158 (1%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ ++ +G+ G V LM + G + V+ TSL+ G + A ++ M+
Sbjct: 125 YTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMR 184
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G EP+ V+Y +K + +EA EV++ +L +S + P+ + +++ G
Sbjct: 185 DNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEML---RSRVSPNCHTYTVLMEYLVATG 241
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVS 299
++A F M E G++ N L++ + E S
Sbjct: 242 KCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETS 279
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 3/147 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ Y K G F+ + ++L+ + GY N + LM+ K G+ A +IF M+ G
Sbjct: 313 LLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKG 372
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+++ + +FKEA+E+ D E + K D M N M+ Y +AG +
Sbjct: 373 VRSDGYANSIMISALCRSKRFKEAKELSR---DSETTYEKCDLVMLNTMLCAYCRAGEME 429
Query: 265 KARKTFALMAERGIEQSTVTYNSLMSF 291
+ M E+ + T++ L+ +
Sbjct: 430 SVMRMMKKMDEQAVSPDYNTFHILIKY 456
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Query: 158 AEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILK 217
AE + M G+ PN+ +SL+ +Y G Y A+ + M+ G P+ V +LK
Sbjct: 256 AENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLK 315
Query: 218 TFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERG 277
+++G F + E+ L E + ++ + M++ KAG ++AR F M +G
Sbjct: 316 VYIKGGLFDRSRELLSEL---ESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKG 372
Query: 278 IEQSTVTYNSLM 289
+ +S NS+M
Sbjct: 373 V-RSDGYANSIM 383
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 155 FNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRM-QKFGPEPSAVTYQ 213
+ A +V M K G NV + L+ Y G+ +A + RM +F P VTY
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244
Query: 214 LILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALM 273
ILK + + + +E+ LLD +K+ L P++ +N ++Y Y K GS +A + LM
Sbjct: 245 TILKAMSKKGRLSDLKEL---LLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301
Query: 274 AERGIEQSTVTYNSLMS 290
+ + TYN L++
Sbjct: 302 KQTNVLPDLCTYNILIN 318
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI Y K+GD +GA +++ M + G N ++ ++++A K + + A + K G
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG 481
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
VTY ++ F + +K ++A E+++ + +K + P FN +I G +
Sbjct: 482 FIVDEVTYGTLIMGFFREEKVEKALEMWDEM---KKVKITPTVSTFNSLIGGLCHHGKTE 538
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
A + F +AE G+ T+NS++
Sbjct: 539 LAMEKFDELAESGLLPDDSTFNSII 563
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 5/143 (3%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
++ K G + +++L M KNG PN V+ +L+ Y K G A I M++
Sbjct: 246 ILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN 305
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKS-PLKPDQKMFNMMIYMYKKAGSY 263
P TY +++ +E E L+D KS L+PD +N +I + G
Sbjct: 306 VLPDLCTYNILINGLCNAGSMREGLE----LMDAMKSLKLQPDVVTYNTLIDGCFELGLS 361
Query: 264 DKARKTFALMAERGIEQSTVTYN 286
+ARK M G++ + VT+N
Sbjct: 362 LEARKLMEQMENDGVKANQVTHN 384
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
+ I G + G+ +GA +++ + + G P+V++ +L+ K ++ AE +M
Sbjct: 256 LFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNE 315
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
G EP + TY ++ + +G + AE + D + PDQ + +I G
Sbjct: 316 GLEPDSYTYNTLIAGYCKGGMVQLAERIVG---DAVFNGFVPDQFTYRSLIDGLCHEGET 372
Query: 264 DKARKTFALMAERGIEQSTVTYNSLMSFETN 294
++A F +GI+ + + YN+L+ +N
Sbjct: 373 NRALALFNEALGKGIKPNVILYNTLIKGLSN 403
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 105/251 (41%), Gaps = 13/251 (5%)
Query: 43 CKGMLTPRKFMQRRRKNTVFKDAADEAEKKNWWKLMEQIDQAGSAVSVLS--DEKLKNQT 100
CKG + + +R + VF ++ + L++ + G L+ +E L
Sbjct: 332 CKGGMV--QLAERIVGDAVFNGFV--PDQFTYRSLIDGLCHEGETNRALALFNEALGKGI 387
Query: 101 IPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGK--MDFIMLITGYGKLGDFNGA 158
P ++ TL+ K L +++E + S F +L+ G K+G + A
Sbjct: 388 KPNVILYNTLI--KGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 159 EKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKT 218
+ ++ +M GY P++ + L+ Y + NA I M G +P TY +L
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Query: 219 FVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGI 278
+ KF++ E ++T+++ P+ FN+++ + D+A M + +
Sbjct: 506 LCKTSKFEDVMETYKTMVE---KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562
Query: 279 EQSTVTYNSLM 289
VT+ +L+
Sbjct: 563 NPDAVTFGTLI 573
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 13/173 (7%)
Query: 127 EWLRNQSWWDFGKM---DFIMLITGYGKL-------GDFNGAEKVLALMNKNGYPPNVVS 176
E + + + FGKM + ++ + KL GD EK+L + K G PN+ +
Sbjct: 194 ENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFT 253
Query: 177 QTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLL 236
++ + G + A + + + GP+P +TY ++ + KF+EAE ++
Sbjct: 254 YNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMV 313
Query: 237 DDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
++ L+PD +N +I Y K G A + G TY SL+
Sbjct: 314 NE---GLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLI 363
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 6/177 (3%)
Query: 123 IEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKN-GYPPNVVSQTSLM 181
+E+ +R + + + +I G G F E+VL M +N G M
Sbjct: 24 LEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAM 83
Query: 182 EAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKS 241
+ YG+ G+ A +F RM + EP+ +Y I+ V F +A +V+ + D
Sbjct: 84 KNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRD---R 140
Query: 242 PLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS--FETNYK 296
+ PD F + + + K A + M+ +G E + V Y +++ +E N+K
Sbjct: 141 GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI GY K G AE+++ NG+ P+ + SL++ G N A A+F G
Sbjct: 327 LIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKG 386
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+P+ + Y ++K EA ++ + EK L P+ + FN+++ K G
Sbjct: 387 IKPNVILYNTLIKGLSNQGMILEAAQLANEM--SEKG-LIPEVQTFNILVNGLCKMGCVS 443
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
A +M +G T+N L+
Sbjct: 444 DADGLVKVMISKGYFPDIFTFNILI 468
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
Query: 172 PNVVSQTSLMEAYGKGGRYNNAEAIFRRMQK-FGPEPSAVTYQLILKTFVQGDKFKEAEE 230
P+ V+ +L++ + K G + A +FR+M++ + S TY +I+ F + AE+
Sbjct: 564 PDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEK 623
Query: 231 VFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
+F+ ++D L PD + +M+ + K G+ + K M E G S T +++
Sbjct: 624 LFQEMVD---RCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVIN 680
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 70/154 (45%), Gaps = 3/154 (1%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI G G A ++ M++ G P V + L+ K G ++A+ + + M G
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P T+ +++ + K + A E+ + +LD+ + PD +N ++ K ++
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDN---GVDPDVYTYNSLLNGLCKTSKFE 513
Query: 265 KARKTFALMAERGIEQSTVTYNSLMSFETNYKEV 298
+T+ M E+G + T+N L+ Y+++
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYRKL 547
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 3/165 (1%)
Query: 120 NLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTS 179
+L ++ E D + +++ + K G F A VL M +N ++ +
Sbjct: 611 SLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNV 670
Query: 180 LMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDE 239
+++ GK GR + A A+ R+ K G V Y ++ + + EA ++F+ + +
Sbjct: 671 IIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHM---K 727
Query: 240 KSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVT 284
+ + PD +N MI + KAG +A K M + G + VT
Sbjct: 728 SNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT 772
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 78/171 (45%), Gaps = 9/171 (5%)
Query: 125 ILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNK------NGYPPNVVSQT 178
+ E L+ + F + + I G+G GD + A + M + + + P++ +
Sbjct: 234 VFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYN 293
Query: 179 SLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDD 238
SL+ G+ +A ++ ++ G EP TY+++++ + + +A ++ +
Sbjct: 294 SLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEM--- 350
Query: 239 EKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+ + PD ++N ++ KA +A + F M + G+ S TYN L+
Sbjct: 351 QYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILI 401
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 83/165 (50%), Gaps = 14/165 (8%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI YGK G A++V + + N+ T++M+AY + + A +F +M
Sbjct: 278 LINMYGKCGKVLYAQRVF----DDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKE 333
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ T+ ++L + + K+ + + +L KS + + N ++ MY K+GS +
Sbjct: 334 VPPNEYTFAILLNSIAELSLLKQGDLLHGLVL---KSGYRNHVMVGNALVNMYAKSGSIE 390
Query: 265 KARKTFALMAERGIEQSTVTYNSLMSFETNY---KEVSNIYDQIL 306
ARK F+ M R I VT+N+++S +++ +E +D+++
Sbjct: 391 DARKAFSGMTFRDI----VTWNTMISGCSHHGLGREALEAFDRMI 431
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
+I Y KLG GA++V N ++++ T+++ AY G ++A ++F +MQ G
Sbjct: 407 IIDNYAKLGFLLGAQRVF----DNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLG 462
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+P VT +L F A+ +F+++L K ++P + + M+ + +AG
Sbjct: 463 TKPDDVTLTAVLSAFAHSGDSDMAQHIFDSML--TKYDIEPGVEHYACMVSVLSRAGKLS 520
Query: 265 KA 266
A
Sbjct: 521 DA 522
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 12/147 (8%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
+IT Y K + A KV M++ +VVS S++ Y + G + + + +++ M
Sbjct: 173 MITYYTKCDNIESARKVFDEMSER----DVVSWNSMISGYSQSGSFEDCKKMYKAMLACS 228
Query: 205 P-EPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
+P+ VT + + Q EV + ++++ ++ D + N +I Y K GS
Sbjct: 229 DFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENH---IQMDLSLCNAVIGFYAKCGSL 285
Query: 264 DKARKTFALMAERGIEQSTVTYNSLMS 290
D AR F M+E+ +VTY +++S
Sbjct: 286 DYARALFDEMSEK----DSVTYGAIIS 308
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 7/165 (4%)
Query: 125 ILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAY 184
I E L ++ D M+ ++L G+ + GD E M K G+ PN V+ ++ +
Sbjct: 198 IFEKLHSRFNPDVKTMNILLL--GFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGF 255
Query: 185 GKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDD-EKSPL 243
K + A +F M + + +T Q IL T + G + L D+ K L
Sbjct: 256 CKKRNFGEALRLFEDMDRLDFD---ITVQ-ILTTLIHGSGVARNKIKARQLFDEISKRGL 311
Query: 244 KPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSL 288
PD +N ++ K G A K M E+GIE +VT++S+
Sbjct: 312 TPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSM 356
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 72/154 (46%), Gaps = 4/154 (2%)
Query: 137 FGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAI 196
FG +F +L+ + + A + ++ + P+V + L+ + + G E
Sbjct: 174 FGVDEFNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELF 232
Query: 197 FRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYM 256
+ M K G +P++VTY + + F + F EA +FE D ++ ++ +I+
Sbjct: 233 YHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFE---DMDRLDFDITVQILTTLIHG 289
Query: 257 YKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
A + KAR+ F +++RG+ YN+LMS
Sbjct: 290 SGVARNKIKARQLFDEISKRGLTPDCGAYNALMS 323
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
+ LI G + + A + L M G PNV + +SLM+ K GR A +F M
Sbjct: 230 YTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMM 289
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G P+ VTY ++ + K +EA E+ + + LKPD ++ +I +
Sbjct: 290 ARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRM---NLQGLKPDAGLYGKVISGFCAIS 346
Query: 262 SYDKARKTFALMAERGIEQSTVTYN 286
+ +A M GI + +T+N
Sbjct: 347 KFREAANFLDEMILGGITPNRLTWN 371
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 4/126 (3%)
Query: 165 MNKNGYPPNVVSQTSLMEAYGKG-GRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGD 223
M + G PP V S L++A + G + IF M K G +P + TY ++ +
Sbjct: 147 MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFG 206
Query: 224 KFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTV 283
+ EA+++F +++ + +P + +I + + D+A + M +GIE +
Sbjct: 207 RIDEAKKLFTEMVEKDCAP---TVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVF 263
Query: 284 TYNSLM 289
TY+SLM
Sbjct: 264 TYSSLM 269
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYP--PNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
F LI+ G+ G + A VLA M +P P+ +S +LM+A G+ A+ +++
Sbjct: 575 FNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQM 634
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
+ K+G + Y + + + + + A +++ D ++ + PD+ F+ +I +
Sbjct: 635 IHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYK---DMKEKDVTPDEVFFSALIDVAGH 691
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKE 297
A D+A +GI T++Y+SLM N K+
Sbjct: 692 AKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKD 729
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 108/239 (45%), Gaps = 15/239 (6%)
Query: 77 LMEQIDQAGSAVSVLS--DEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSW 134
L+ Q+G L DE +K + P + GTL+ L K + V E L+ +++
Sbjct: 158 LIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIH--GLCKDSRVKEALK-MKHDML 214
Query: 135 WDFGKMD----FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRY 190
+G + LI ++G+ + A K+ + + ++L+ + K GR
Sbjct: 215 KVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRS 274
Query: 191 NNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMF 250
N I M + G +P VTY +++ F + + A V + ++ EK LKPD +
Sbjct: 275 NEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMV--EKG-LKPDVISY 331
Query: 251 NMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSL---MSFETNYKEVSNIYDQIL 306
NM++ ++ + +++A F M RG T++Y + + ++E + I D++L
Sbjct: 332 NMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEML 390
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Query: 169 GYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEA 228
G P++V +LM+ + G + A ++ + M P VTY +++ KF+EA
Sbjct: 462 GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEA 521
Query: 229 EEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSL 288
E+ + ++ +KPD +N +I Y K G A M G + +TYN+L
Sbjct: 522 RELMGEM---KRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNAL 578
Query: 289 M 289
+
Sbjct: 579 L 579
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 11/202 (5%)
Query: 93 DEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKL 152
DE +K +P TL+ ++ EIL + + + +LI GY +
Sbjct: 351 DEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQH 410
Query: 153 GDFNGAEKVLAL---MNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSA 209
GD A+K AL M +G P + TSL+ + + A+ +F ++ G +P
Sbjct: 411 GD---AKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDL 467
Query: 210 VTYQLILKTFVQGD-KFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARK 268
V ++ T + G + F L + + + PD +N ++ G +++AR+
Sbjct: 468 V----MMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARE 523
Query: 269 TFALMAERGIEQSTVTYNSLMS 290
M RGI+ ++YN+L+S
Sbjct: 524 LMGEMKRRGIKPDHISYNTLIS 545
>AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8183594-8185180 REVERSE
LENGTH=501
Length = 501
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
+I Y G F A L M +NG P + L+EAYGK Y+ +RM+ G
Sbjct: 173 IIHSYADDGKFEEAMFYLNHMKENGLLPITETYDGLIEAYGKWKMYDEIVLCLKRMESDG 232
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
VTY L+++ F +G K E+++++L+ K L+P + M+ Y + G +
Sbjct: 233 CVRDHVTYNLLIREFSRGGLLKRMEQMYQSLM-SRKMTLEPSTLL--SMLEAYAEFGLIE 289
Query: 265 KARKTFALMAERGI 278
K +T + GI
Sbjct: 290 KMEETCNKIIRFGI 303
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Query: 172 PNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEV 231
P++VS T L++ A + ++ G +P Y I+K F K EA V
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 232 FETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
++ + ++ ++PDQ +N +I+ KAG ++AR M + G E T TY SLM+
Sbjct: 288 YKKMKEEG---VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMN 343
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/210 (18%), Positives = 95/210 (45%), Gaps = 6/210 (2%)
Query: 80 QIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGK 139
++D+A + L+++ T + ++ L + K L ++V E ++ +R+
Sbjct: 174 RVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDL---HVVYEFVDEMRDDFDVKPDL 230
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
+ F +LI + A +++ + G+ P+ ++M+ + + + A ++++
Sbjct: 231 VSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKK 290
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M++ G EP +TY ++ + + +EA +T++D + +PD + ++ +
Sbjct: 291 MKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVD---AGYEPDTATYTSLMNGMCR 347
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLM 289
G A M RG + TYN+L+
Sbjct: 348 KGESLGALSLLEEMEARGCAPNDCTYNTLL 377
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 93/206 (45%), Gaps = 19/206 (9%)
Query: 86 SAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIML 145
S V ++ +++++ K ++ + + ++ + L RN W+ +
Sbjct: 285 SLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWN-------AM 337
Query: 146 ITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG- 204
I+GY ++GD + A ++ M K NVVS SL+ Y G+ A F M +G
Sbjct: 338 ISGYTRIGDMSSARQLFDTMPKR----NVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGD 393
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+P VT +L + + + + + K+ +K + + +I+MY + G+
Sbjct: 394 SKPDEVTMISVLSACGHMADLELGDCIVDYI---RKNQIKLNDSGYRSLIFMYARGGNLW 450
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
+A++ F M ER + V+YN+L +
Sbjct: 451 EAKRVFDEMKERDV----VSYNTLFT 472
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
Query: 172 PNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEV 231
P++VS T L++ A + ++ G +P Y I+K F K EA V
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 232 FETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
++ + ++ ++PDQ +N +I+ KAG ++AR M + G E T TY SLM+
Sbjct: 288 YKKMKEEG---VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMN 343
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+T YG+ G ++V M+ +VVS SL+ +YG G A IF M G
Sbjct: 326 LVTMYGRCGKLEVGQRVFDRMHDR----DVVSWNSLISSYGVHGYGKKAIQIFEEMLANG 381
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ VT+ +L +E + +FET+ D +KP + + M+ + +A D
Sbjct: 382 ASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHG--IKPQIEHYACMVDLLGRANRLD 439
Query: 265 KARK 268
+A K
Sbjct: 440 EAAK 443
>AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:13116547-13118059 FORWARD
LENGTH=452
Length = 452
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 7/160 (4%)
Query: 119 WNLVIEILEWL----RNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNV 174
WN + E + L R Q+ + + +L++ YG+L E + K PPN
Sbjct: 150 WNGLAEECQSLFKDFRRQTHCAPTVVTYNILVSVYGRLLMVKNMEAAFEELQKVKLPPNS 209
Query: 175 VSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFET 234
V+ L+ Y ++ EA F+ M++ EP TYQL+L+ + EE++E
Sbjct: 210 VTYNFLIAGYMTAWNWDKMEATFQEMKRGPVEPDTDTYQLMLRGYANSGNLNRMEEMYEV 269
Query: 235 LLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMA 274
+ D P + MI Y K D+ +K L++
Sbjct: 270 IKDQVGVNSGP---LVRAMICAYCKKAVEDRVQKIENLLS 306
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 171 PPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEE 230
P VV+ L+ YG+ N EA F +QK P++VTY ++ ++ + + E
Sbjct: 171 APTVVTYNILVSVYGRLLMVKNMEAAFEELQKVKLPPNSVTYNFLIAGYMTAWNWDKMEA 230
Query: 231 VFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAER 276
F+ + ++ P++PD + +M+ Y +G+ ++ + + ++ ++
Sbjct: 231 TFQEM---KRGPVEPDTDTYQLMLRGYANSGNLNRMEEMYEVIKDQ 273
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LIT Y K G + A +V M+ P++V+ T+ + + G + A +F +M G
Sbjct: 428 LITMYSKCGCLDDANEVFESMDN----PDIVAWTAFISGHAYYGNASEALRLFEKMVSCG 483
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+P++VT+ +L ++ + +T+L K + P ++ MI +Y ++G D
Sbjct: 484 MKPNSVTFIAVLTACSHAGLVEQGKHCLDTML--RKYNVAPTIDHYDCMIDIYARSGLLD 541
Query: 265 KARK 268
+A K
Sbjct: 542 EALK 545
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 81/169 (47%), Gaps = 5/169 (2%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
++I + GD N A+ ++ M+ G P+V++ TS++ Y G+ ++A + + M K
Sbjct: 170 LVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKH 229
Query: 204 GPEPSAVTYQLILKTFVQ-GDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGS 262
++VTY IL+ + GD + E + E +D + P+ + ++I + +
Sbjct: 230 DCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRR 289
Query: 263 YDKARKTFALMAERGIEQSTVTYNSL----MSFETNYKEVSNIYDQILK 307
++A M RG + VT L + + + K +S + D+++K
Sbjct: 290 VEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVK 338
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 196 IFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIY 255
+F+ M++ + Y +I+ + KF EA +F LL S L+PD + +NMMI
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLL---ISGLQPDVQTYNMMI- 56
Query: 256 MYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+ S +A K +A M RG+ T+TYNS++
Sbjct: 57 ---RFSSLGRAEKLYAEMIRRGLVPDTITYNSMI 87
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 159 EKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKT 218
EK +L G+ P+VV+ T +ME GR + A + R++ G + V ++K
Sbjct: 272 EKCFSL----GFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKG 327
Query: 219 FVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGI 278
+ K + A+ F ++ E+ P+ + +N++I Y G D A TF M I
Sbjct: 328 YCALGKMRVAQRFF---IEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAI 384
Query: 279 EQSTVTYNSLM 289
+ T+N+L+
Sbjct: 385 RWNFATFNTLI 395
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 83/198 (41%), Gaps = 35/198 (17%)
Query: 115 QLKKWNL--VIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPP 172
QL++ N +++ E + ++ ++ D+ LI + K E++L M++NG P
Sbjct: 358 QLREGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFP 417
Query: 173 NVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFV------------ 220
++++ T+L+ Y K G + A F ++ +G P Y+ ++ +V
Sbjct: 418 DILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLM 477
Query: 221 ---QGDKFKEAEEVFETLL------DDEKSPLKPDQKM------------FNMMIYMYKK 259
Q + K +EEV+ LL D M +++ + Y K
Sbjct: 478 KEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGK 537
Query: 260 AGSYDKARKTFALMAERG 277
AG DKA+ F M + G
Sbjct: 538 AGQVDKAKSNFDEMRKLG 555
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 14/172 (8%)
Query: 121 LVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMN---KNGYPPNVVSQ 177
LV+++L S +D+G + KL N A + + +M K G P ++
Sbjct: 320 LVLDLLNKRVLPSEFDYGSL--------VEKLCGENKAVRAMEMMEELWKKGQTPCFIAC 371
Query: 178 TSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLD 237
T+L+E K GR A +M G P +VT+ L+L+ D +A + LL
Sbjct: 372 TTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRL--RLLA 429
Query: 238 DEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
K +PD+ +++++ + K G + M ++ + TYN LM
Sbjct: 430 SSKG-YEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLM 480
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 45/84 (53%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
++ GY K GD + A + M K P+V + L+ Y + +++ A +FR M++ G
Sbjct: 199 VVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKG 258
Query: 205 PEPSAVTYQLILKTFVQGDKFKEA 228
EP+ V++ +++ F+ K +E
Sbjct: 259 CEPNVVSFNTLIRGFLSSGKIEEG 282
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 157 GAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLIL 216
A L M + G P+V+ T+L++ Y G + A+ +FR M G P+ TY ++
Sbjct: 707 AALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 766
Query: 217 KTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAER 276
+ +F+EA + + + E P+ +++ ++ +KAG +ARK M ++
Sbjct: 767 RGLCMAGEFREACWLLKEM---ESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKK 823
Query: 277 G 277
G
Sbjct: 824 G 824
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 8/152 (5%)
Query: 139 KMDFIMLITGYGKLGDFNGAEKVLALMNKNG-YPPNVVSQTSLMEAYGKGGRYNNAEAIF 197
+M + ++ GK+ D V L + G +V +SL++ YGK Y++A+ +F
Sbjct: 204 EMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVF 263
Query: 198 RRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMY 257
M P + VT+ ++ +VQ F + VFE +L S + P++K + ++
Sbjct: 264 DEM----PSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLK---SDVAPNEKTLSSVLSAC 316
Query: 258 KKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
G+ + R+ M + IE +T +L+
Sbjct: 317 AHVGALHRGRRVHCYMIKNSIEINTTAGTTLI 348
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F LI G G N A + +G+P + +L+ AY R +A M+
Sbjct: 305 FCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMR 364
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G P+A TY +IL ++ + KEA EV++T+ +P + +M+ M+
Sbjct: 365 LKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM------SCEPTVSTYEIMVRMFCNKE 418
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLMS---FETNYKEVSNIYDQIL 306
D A K + M +G+ ++SL++ E E ++++L
Sbjct: 419 RLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEML 466
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 3/149 (2%)
Query: 141 DFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRM 200
DF ++ K + A+KV M K + P++ S T L+E +G+ + + R M
Sbjct: 199 DFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREM 258
Query: 201 QKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKA 260
+ G EP V Y +I+ + K++EA F + E+ KP +F +I
Sbjct: 259 KDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEM---EQRNCKPSPHIFCSLINGLGSE 315
Query: 261 GSYDKARKTFALMAERGIEQSTVTYNSLM 289
+ A + F G TYN+L+
Sbjct: 316 KKLNDALEFFERSKSSGFPLEAPTYNALV 344
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 114 KQLKKWNLVIEIL----EWLRNQSWWDFGK--------MDFIMLITGYGKLGDFNGAEKV 161
+ ++ N +I +L E + +S++D K + F +LI G+ D+ A KV
Sbjct: 149 RTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKV 208
Query: 162 LALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQ 221
M + P+VV+ SL+ + A+++ M K P+AVT+ L++K
Sbjct: 209 FDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCC 268
Query: 222 GDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQS 281
++ EA+++ + D E KP + +++ K G D+A+ M +R I+
Sbjct: 269 KGEYNEAKKL---MFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPD 325
Query: 282 TVTYNSLMSFETNYKEVSNIY 302
V YN L++ V Y
Sbjct: 326 VVIYNILVNHLCTECRVPEAY 346
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 3/147 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI K +F+ +++L L+ L++ YGK G + A +F ++ F
Sbjct: 87 LIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFD 146
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+ + ++ V + ++A+ F+ D L+P+ FN++I + ++
Sbjct: 147 CVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR---LRPNSVSFNILIKGFLDKCDWE 203
Query: 265 KARKTFALMAERGIEQSTVTYNSLMSF 291
A K F M E ++ S VTYNSL+ F
Sbjct: 204 AACKVFDEMLEMEVQPSVVTYNSLIGF 230
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 92/210 (43%), Gaps = 6/210 (2%)
Query: 82 DQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLK-KWNLVIEILEWLRNQSWWDFGKM 140
D G A S+L D +K + P + G L++ K ++N +++ + + G +
Sbjct: 235 DDMGKAKSLLED-MIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKP-GLV 292
Query: 141 DFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRM 200
++ +L++ GK G + A+ +L M K P+VV L+ R A + M
Sbjct: 293 NYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEM 352
Query: 201 QKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKA 260
Q G +P+A TY++++ F + + F V +L P F M+ K
Sbjct: 353 QMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHC---PTPATFVCMVAGLIKG 409
Query: 261 GSYDKARKTFALMAERGIEQSTVTYNSLMS 290
G+ D A +M ++ + + + +L+S
Sbjct: 410 GNLDHACFVLEVMGKKNLSFGSGAWQNLLS 439
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F ++I+G+ + KVLA+M G V + +++ K + A+A+ M
Sbjct: 225 FGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGML 284
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G +P+ VTY ++ F D F+EA+++F+ +++ KPD + + +IY K G
Sbjct: 285 SAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVN---RGCKPDSECYFTLIYYLCKGG 341
Query: 262 SYDKA 266
++ A
Sbjct: 342 DFETA 346
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
++++GY ++GD + A + + + ++V +L+ Y + G ++A F MQ
Sbjct: 213 LMMSGYFRIGDVHEARAIFYRV----FARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGE 268
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
G EP AVT IL Q + EV +L++ L +Q + N +I MY K G
Sbjct: 269 GYEPDAVTVSSILSACAQSGRLDVGREV-HSLINHRGIEL--NQFVSNALIDMYAKCGDL 325
Query: 264 DKARKTFALMAERGIEQSTVTYNSLMS 290
+ A F ++ R S NS++S
Sbjct: 326 ENATSVFESISVR----SVACCNSMIS 348
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Query: 178 TSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLD 237
++L+ +YG+ +N+A F +M ++G SAV++ +L + F + ++F+ +
Sbjct: 106 STLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDE-IP 164
Query: 238 DEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
+ + PD+ + ++I Y +G+ +KA + M +G+E +T+ + +++S
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILS 217
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 103/234 (44%), Gaps = 45/234 (19%)
Query: 112 RFKQLKKWNLVIEILEWLRNQSWWDFGKMDF---IMLITGYGKLGD-------------- 154
R ++ KK++ + E+L++ + + D DF IML+ GY + +
Sbjct: 96 RLREAKKFSTIDEVLQY--QKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMPELNC 153
Query: 155 ------FNG-------------AEKVL-ALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAE 194
FN A K L K G P++V+ ++++A + G ++
Sbjct: 154 ERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDIL 213
Query: 195 AIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMI 254
+IF ++K G EP +++ +L+ F + + F E + +++ + + L P+ + +N +
Sbjct: 214 SIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLM---KSKNLSPNIRSYNSRV 270
Query: 255 YMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS---FETNYKEVSNIYDQI 305
+ + A +M GI TYN+L++ + N +EV Y+++
Sbjct: 271 RGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEM 324
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 15/124 (12%)
Query: 141 DFIMLITGYGKLGD-FNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
D + G+ + N +K+ + NK P VV+ T L++A G NA IF +
Sbjct: 702 DLARCLCSAGRCNEGLNMLKKICRVANK----PLVVTYTGLIQACVDSGNIKNAAYIFDQ 757
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDE---------KSPLKPDQKMF 250
M+K P+ VT ++LK ++QG F+EA E+F+ + +D +S + PD F
Sbjct: 758 MKKVCS-PNLVTCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTF 816
Query: 251 NMMI 254
N M+
Sbjct: 817 NTML 820
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 129 LRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGG 188
LR + + D+ M + L+ Y K G A++V LM+K + V+ TSL++ YG G
Sbjct: 408 LRRKCFKDY-TMLWNSLVDVYAKSGKIVAAKQVSDLMSKR----DEVTYTSLIDGYGNQG 462
Query: 189 RYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQK 248
A A+F+ M + G +P VT +L E E +F + + ++P +
Sbjct: 463 EGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKM--QCEYGIRPCLQ 520
Query: 249 MFNMMIYMYKKAGSYDKAR 267
F+ M+ +Y +AG KA+
Sbjct: 521 HFSCMVDLYGRAGFLAKAK 539
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 60/122 (49%), Gaps = 7/122 (5%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
++ Y K G A + + + N++S T ++ AY G + A A+F M++ G
Sbjct: 468 IVDAYAKCGAIEMARRTFDQITEK----NIISWTVIISAYAINGLPDKALALFDEMKQKG 523
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+AVTY L G K+ +F+++++++ KP + ++ ++ M +AG D
Sbjct: 524 YTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDH---KPSLQHYSCIVDMLSRAGEID 580
Query: 265 KA 266
A
Sbjct: 581 TA 582
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 7/142 (4%)
Query: 129 LRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGG 188
LR QS+ D + + L+ Y K G+ A++V M K + V+ TSL++ YG+ G
Sbjct: 450 LRRQSYKDCLIL-WNSLVDMYAKSGEIIAAKRVFDSMRKR----DKVTYTSLIDGYGRLG 504
Query: 189 RYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQK 248
+ A A F+ M + G +P VT +L + +E +F + + ++ +
Sbjct: 505 KGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKM--EHVFGIRLRLE 562
Query: 249 MFNMMIYMYKKAGSYDKARKTF 270
++ M+ +Y +AG DKAR F
Sbjct: 563 HYSCMVDLYCRAGYLDKARDIF 584
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 7/142 (4%)
Query: 129 LRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGG 188
LR QS+ D + + L+ Y K G+ A++V M K + V+ TSL++ YG+ G
Sbjct: 450 LRRQSYKDCLIL-WNSLVDMYAKSGEIIAAKRVFDSMRKR----DKVTYTSLIDGYGRLG 504
Query: 189 RYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQK 248
+ A A F+ M + G +P VT +L + +E +F + + ++ +
Sbjct: 505 KGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKM--EHVFGIRLRLE 562
Query: 249 MFNMMIYMYKKAGSYDKARKTF 270
++ M+ +Y +AG DKAR F
Sbjct: 563 HYSCMVDLYCRAGYLDKARDIF 584
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 74/165 (44%), Gaps = 5/165 (3%)
Query: 142 FIMLITGYGKL-GDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRM 200
F +++ G+ + D A+++ M PN S + ++ + K G ++ ++ M
Sbjct: 261 FNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEM 320
Query: 201 QKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKA 260
+K G P Y ++ + D F EA ++ + L + LKPD +N MI +A
Sbjct: 321 KKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKL---NEEGLKPDSVTYNSMIRPLCEA 377
Query: 261 GSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYDQI 305
G D AR A M + + T+++ + N+++ + Q+
Sbjct: 378 GKLDVARNVLATMISENLSPTVDTFHAFLE-AVNFEKTLEVLGQM 421
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 10/148 (6%)
Query: 142 FIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQ 201
F L+ GY KLGD N A+ + + +VV+ T+++ Y + G Y A +FR M
Sbjct: 350 FTALLDGYIKLGDMNQAKNIFVSLKDR----DVVAWTAMIVGYEQHGSYGEAINLFRSMV 405
Query: 202 KFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAG 261
G P++ T +L +++ + + KS + N +I MY KAG
Sbjct: 406 GGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAV---KSGEIYSVSVSNALITMYAKAG 462
Query: 262 SYDKARKTFALMAERGIEQSTVTYNSLM 289
+ A + F L+ E+ TV++ S++
Sbjct: 463 NITSASRAFDLIR---CERDTVSWTSMI 487
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
++I+GY + D + A + ++ K+G PP V + T +M+ K ++ +F M +
Sbjct: 403 IIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIEN 462
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
G EP +V ++ + ++ EA +VF ++ E+ +KP K +++ + ++ Y
Sbjct: 463 GIEPDSVAITAVVAGHLGQNRVAEAWKVFSSM---EEKGIKPTWKSYSIFVKELCRSSRY 519
Query: 264 DKARKTFALM 273
D+ K F M
Sbjct: 520 DEIIKIFNQM 529
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 84/183 (45%), Gaps = 13/183 (7%)
Query: 110 LVRFKQLKKWNLVIEIL---EWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMN 166
L + +LKK VIE++ + + S + + L+ K G+ A +++ M
Sbjct: 116 LCKANRLKKAIRVIELMVSSGIIPDASAYTY-------LVNQLCKRGNVGYAMQLVEKME 168
Query: 167 KNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFK 226
+GYP N V+ +L+ G N + R+ + G P+A TY +L+ +
Sbjct: 169 DHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTD 228
Query: 227 EAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYN 286
EA ++ + ++ +P+ +N+++ + K G D A F + +G + + V+YN
Sbjct: 229 EAVKLLDEIIVKGG---EPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYN 285
Query: 287 SLM 289
L+
Sbjct: 286 ILL 288
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 105/251 (41%), Gaps = 46/251 (18%)
Query: 80 QIDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKKWNLVIEILEWLRNQ-SWWDF- 137
+I ++G A VL + +N I +L+IG VR Q + E L+ L+N S+ D
Sbjct: 110 KIGESGLAKKVLRNASDQN-VITWNLMIGGYVRNVQYE------EALKALKNMLSFTDIK 162
Query: 138 -GKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNA--- 193
K F + +LGD + A+ V +LM +G N + ++L++ Y K G +
Sbjct: 163 PNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREV 222
Query: 194 --------------------------EAI--FRRMQKFGPEPSAVTYQLILKTFVQGDKF 225
EAI F M+ P ++T+ +L T
Sbjct: 223 FYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLL 282
Query: 226 KEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTY 285
+E +E F L + ++P + + M+ + +AG + ++ + L+ IE V +
Sbjct: 283 EEGKEYFG--LMSRRFSIQPKLEHYGAMVDLLGRAG---RVKEAYELIESMPIEPDVVIW 337
Query: 286 NSLMSFETNYK 296
SL+S YK
Sbjct: 338 RSLLSSSRTYK 348
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 5/151 (3%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
++ K + A ++ M NG P V+S +L+ A KG Y+ A ++ M K G
Sbjct: 464 VLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVG 523
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSP-LKPDQKMFNMMIYMYKKAGSY 263
EP+ Y + KF + +TLL + S ++P FN +I + G
Sbjct: 524 IEPNLYAYTTMASVLTGQQKFN----LLDTLLKEMASKGIEPSVVTFNAVISGCARNGLS 579
Query: 264 DKARKTFALMAERGIEQSTVTYNSLMSFETN 294
A + F M +E + +TY L+ N
Sbjct: 580 GVAYEWFHRMKSENVEPNEITYEMLIEALAN 610
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 23/194 (11%)
Query: 111 VRFKQLKKWNLVIEILEWLRNQSWWDFGKM------------DFIM--LITGYGKLGDFN 156
+R + L W+ +I + R W + K+ DF+ ++ G GD
Sbjct: 141 MRERNLFTWSAMIG--AYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVE 198
Query: 157 GAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLIL 216
+ + +++ K G + S++ Y K G + A FRRM+ E + + +L
Sbjct: 199 AGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMR----ERDVIAWNSVL 254
Query: 217 KTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAER 276
+ Q K +EA E+ + + EK + P +N++I Y + G D A M
Sbjct: 255 LAYCQNGKHEEAVELVKEM---EKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETF 311
Query: 277 GIEQSTVTYNSLMS 290
GI T+ +++S
Sbjct: 312 GITADVFTWTAMIS 325
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 19/161 (11%)
Query: 86 SAVSVLSDEKLKNQT------------IPKDLVIGTLVR-FKQLKKWNLVIEILEWLRNQ 132
SAVS S K+ NQ I LV +LV + + K ++ + ++N+
Sbjct: 357 SAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK 416
Query: 133 SWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNN 192
+ + M ITGY + G A ++ M PN+++ +++ Y K G
Sbjct: 417 DVYTWNSM-----ITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGE 471
Query: 193 AEAIFRRMQKFGP-EPSAVTYQLILKTFVQGDKFKEAEEVF 232
A +F+RM+K G + + T+ LI+ ++Q K EA E+F
Sbjct: 472 AMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELF 512
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 14/149 (9%)
Query: 130 RNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGR 189
RN W LI GY G+ N A+++ LM + NVVS T+L+ + + G
Sbjct: 225 RNSGSWS-------TLIKGYVDSGELNRAKQLFELMPEK----NVVSWTTLINGFSQTGD 273
Query: 190 YNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKM 249
Y A + + M + G +P+ T +L + + +LD+ +K D+ +
Sbjct: 274 YETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDN---GIKLDRAI 330
Query: 250 FNMMIYMYKKAGSYDKARKTFALMAERGI 278
++ MY K G D A F+ M + I
Sbjct: 331 GTALVDMYAKCGELDCAATVFSNMNHKDI 359
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 100/232 (43%), Gaps = 19/232 (8%)
Query: 64 DAADEAEKKNWWKLMEQIDQAG---SAVSVLSDEKLKNQTIPKDLVIGTLVR-FKQLKKW 119
D + E +W ++ Q G A+S+ E K++ P + I ++ QL
Sbjct: 378 DESPEKSLPSWNAMISGYTQNGLTEDAISLFR-EMQKSEFSPNPVTITCILSACAQLGAL 436
Query: 120 NLVIEILEWLRNQSWWDFGKMDFI--MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQ 177
+L + + +R+ DF ++ LI Y K G A ++ LM K N V+
Sbjct: 437 SLGKWVHDLVRST---DFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKK----NEVTW 489
Query: 178 TSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLD 237
+++ YG G+ A IF M G P+ VT+ +L KE +E+F +++
Sbjct: 490 NTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMI- 548
Query: 238 DEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
+ +P K + M+ + +AG +A + M+ IE + + +L+
Sbjct: 549 -HRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMS---IEPGSSVWETLL 596
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L T Y KL + A K+ + P S +++ Y + G +A ++FR MQK
Sbjct: 360 LTTVYSKLNEIESARKLFDESPEKSLP----SWNAMISGYTQNGLTEDAISLFREMQKSE 415
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P+ VT IL Q + V + + + + + +I MY K GS
Sbjct: 416 FSPNPVTITCILSACAQLGALSLGKWVHDLV---RSTDFESSIYVSTALIGMYAKCGSIA 472
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS---FETNYKEVSNIYDQIL 306
+AR+ F LM ++ + VT+N+++S +E NI+ ++L
Sbjct: 473 EARRLFDLMTKK----NEVTWNTMISGYGLHGQGQEALNIFYEML 513
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 72/185 (38%), Gaps = 21/185 (11%)
Query: 122 VIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVV---SQT 178
+E W+ +D ++ + K DF G L +++ NVV S T
Sbjct: 110 ALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASIT 169
Query: 179 SLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDD 238
LM+ G+ G A A F RM+++ +P Y I+ + FK+A LLD
Sbjct: 170 CLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKA----RFLLDQ 225
Query: 239 EKSP---LKPDQKMFNMMIYMYKKAGSYDKARKT-----------FALMAERGIEQSTVT 284
+ P PD + ++I Y + G RK F M RG VT
Sbjct: 226 MQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVT 285
Query: 285 YNSLM 289
YN L+
Sbjct: 286 YNCLI 290
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI Y K G + KV ++ PN+ TS++ Y + G + + R M +
Sbjct: 460 LIDAYTKSGQNEVSRKVFDELDT----PNIFCLTSIINGYARNGMGTDCVKMLREMDRMN 515
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P VT +L +E E +F++L + K + P +K++ M+ + +AG +
Sbjct: 516 LIPDEVTILSVLSGCSHSGLVEEGELIFDSL--ESKYGISPGRKLYACMVDLLGRAGLVE 573
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
KA + L+ RG + V ++SL+
Sbjct: 574 KAERL--LLQARG-DADCVAWSSLL 595
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 74/161 (45%), Gaps = 7/161 (4%)
Query: 134 WWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNA 193
W F ++I G+ K F+ KV+ +M++ G V + +++ K + A
Sbjct: 212 WIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEA 271
Query: 194 EAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMM 253
+A+ + P++VTY L++ F + EA +FE ++ + KPD + + +
Sbjct: 272 KALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCN---GYKPDSECYFTL 328
Query: 254 IYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETN 294
I+ K G ++ A ++ +E++ V S+M + N
Sbjct: 329 IHCLCKGGDFETA----LILCRESMEKNWVPSFSVMKWLVN 365
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 89/187 (47%), Gaps = 17/187 (9%)
Query: 118 KWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQ 177
KWN + + + + + M + GY K+G A + M + NV++
Sbjct: 192 KWNEAVRVFQGMAVKEVVSCSSM-----VHGYCKMGRIVDARSLFDRMTER----NVITW 242
Query: 178 TSLMEAYGKGGRYNNAEAIFRRMQKFGP-EPSAVTYQLILKTFVQGDKFKEAEEVFETLL 236
T++++ Y K G + + +F RM++ G + ++ T ++ K +++E ++ +
Sbjct: 243 TAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLV- 301
Query: 237 DDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYK 296
+ PL+ D + N ++ MY K G +A+ F +M + +V++NSL++ K
Sbjct: 302 --SRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNK----DSVSWNSLITGLVQRK 355
Query: 297 EVSNIYD 303
++S Y+
Sbjct: 356 QISEAYE 362
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 173 NVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVF 232
+VVS ++L+E + + A +F M++ G + VTY ++K F++ A+++
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 233 ETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
+ + + L PD+ + ++ K+G+ DKA F M E I ++YNSL+S
Sbjct: 384 DQM---TELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLIS 438
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 91/228 (39%), Gaps = 57/228 (25%)
Query: 107 IGTLVRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIML-------ITGYGKLGDFNGAE 159
IG LVR + + L +WD M F ++ I+G K+ F+ +
Sbjct: 51 IGVLVRESRFE-----------LAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLID 99
Query: 160 KVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTF 219
+L+ M G+ P++ + ++ + + A F M + G EP V+Y +++
Sbjct: 100 ALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGL 159
Query: 220 VQGDKFKEAEEVFETLLDDEKSPLKPDQK------------------------------- 248
+ K +A E++ ++ +S + PD K
Sbjct: 160 FRAGKVTDAVEIWNAMI---RSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARV 216
Query: 249 -----MFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSF 291
++N +I + KAG +KA + M++ G E VTYN L+++
Sbjct: 217 KLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNY 264
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI+G+ K G AE + + M+K G P++V+ L+ Y AE + M + G
Sbjct: 226 LISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSG 285
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+ A +Y +LK + ++ + ++ + + D ++ +I + +A +
Sbjct: 286 IQLDAYSYNQLLKRHC---RVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTR 342
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
KA + F M ++G+ + VTY SL+
Sbjct: 343 KAYRLFEEMRQKGMVMNVVTYTSLI 367
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 6/165 (3%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI + + + A ++ M + G NVV+ TSL++A+ + G + A+ + +M + G
Sbjct: 331 LIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELG 390
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P + Y IL + +A VF +++ E + PD +N +I ++G
Sbjct: 391 LSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHE---ITPDAISYNSLISGLCRSGRVT 447
Query: 265 KARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIY---DQIL 306
+A K F M + +T+ ++ K++S Y DQ++
Sbjct: 448 EAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMM 492
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 8/164 (4%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
+L+ Y + G F+ A KV M++ NVV+ SL+ K R + +FR+MQ+
Sbjct: 276 VLLKLYMESGLFDDARKVFDGMSER----NVVTWNSLISVLSKKVRVHEMFNLFRKMQEE 331
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
S T IL + +E+ +L KS KPD + N ++ MY K G
Sbjct: 332 MIGFSWATLTTILPACSRVAALLTGKEIHAQIL---KSKEKPDVPLLNSLMDMYGKCGEV 388
Query: 264 DKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYDQILK 307
+ +R+ F +M + + + N + N +EV N+++ +++
Sbjct: 389 EYSRRVFDVMLTKDLASWNIMLNC-YAINGNIEEVINLFEWMIE 431
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 11/146 (7%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
++TGY K G F+ E++L M+ N +V+ +++ Y G Y A + RRM G
Sbjct: 225 MMTGYVKNGYFDLGEELLEGMDDN---MKLVAYNAMISGYVNRGFYQEALEMVRRMVSSG 281
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
E TY +++ + ++V +L E D N ++ +Y K G +D
Sbjct: 282 IELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD----NSLVSLYYKCGKFD 337
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
+AR F M + + V++N+L+S
Sbjct: 338 EARAIFEKMPAKDL----VSWNALLS 359
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 43/174 (24%)
Query: 145 LITGYGKLGDFNGAEKVLALMNK-----------NGY-----------------PPNVVS 176
+ITGY KLGD A ++ ++ +GY NVVS
Sbjct: 83 VITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVS 142
Query: 177 QTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLL 236
++++ Y + GR + A +F M PE + V++ ++K VQ + EA +FE +
Sbjct: 143 WNTMIDGYAQSGRIDKALELFDEM----PERNIVSWNSMVKALVQRGRIDEAMNLFERM- 197
Query: 237 DDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
P + D + M+ K G D+AR+ F M ER I +++N++++
Sbjct: 198 -----P-RRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI----ISWNAMIT 241
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 10/180 (5%)
Query: 123 IEILEWLRNQSWWDFGKMDFIML--ITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSL 180
++ +E+ R FG+ +ML + G LGD V + + G P NVV +TSL
Sbjct: 199 LKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSL 258
Query: 181 MEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEK 240
++ Y K G A +F RM +AV++ ++ F Q A + FE +++ +
Sbjct: 259 VDMYAKVGFIEVASRVFSRMMF----KTAVSWGSLISGFAQNGL---ANKAFEAVVEMQS 311
Query: 241 SPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSN 300
+PD ++ + GS R + +R + VT +LM + +S+
Sbjct: 312 LGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSS 370
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 66/130 (50%), Gaps = 4/130 (3%)
Query: 163 ALMNKNGYPPNVVSQT---SLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTF 219
AL+ + P + ++T +L+ +YG+ +++A +F M K G + V++ +L
Sbjct: 88 ALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAAC 147
Query: 220 VQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIE 279
+ D F+ ++F+ + + PD+ + M+I Y +G +KA + M +G+E
Sbjct: 148 LHSDLFERVPQLFDE-FPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVE 206
Query: 280 QSTVTYNSLM 289
+ + + +++
Sbjct: 207 VTIIAFTTIL 216
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 3/156 (1%)
Query: 136 DFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEA 195
D + F + I + +LG +GA + M K+G P+VV+ T+L+ A K R
Sbjct: 174 DIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNG 233
Query: 196 IFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIY 255
++ M G +P+ T+ + ++ V + +A ++ LL K ++PD +NM+I
Sbjct: 234 LWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDL---LLLMPKLQVEPDSITYNMVIK 290
Query: 256 MYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMSF 291
+ A D A + + M +G + + Y +++ +
Sbjct: 291 GFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHY 326
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 10/136 (7%)
Query: 172 PNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEV 231
PNVVS T+L+ Y K + A ++FR M PE S VT+ ++ F Q + +EA
Sbjct: 157 PNVVSITNLISGYLKKHEFEEALSLFRAM----PERSVVTWNAVIGGFSQTGRNEEAVNT 212
Query: 232 FETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAE-RGIEQSTVTYNSLMS 290
F +L + + P++ F I S+ + A + G + +NSL+S
Sbjct: 213 FVDML--REGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLIS 270
Query: 291 FETNYKEVSNIYDQIL 306
F Y + N+ D +L
Sbjct: 271 F---YSKCGNMEDSLL 283
>AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:338538-339905 FORWARD
LENGTH=409
Length = 409
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 85/203 (41%), Gaps = 34/203 (16%)
Query: 113 FKQLKKWN--LVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGY 170
K+LK + I++ E+ Q ++ D+ +I YGKL AE+ L M G+
Sbjct: 137 LKELKNLDSPFYIKVAEFSLLQDSFEANARDYTKIIHYYGKLNQVEDAERTLLSMKNRGF 196
Query: 171 PPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAE- 229
+ V+ T++++ Y K G + AE F ++ G +Y ++ +++ ++ E
Sbjct: 197 LIDQVTLTAMVQLYSKAGCHKLAEETFNEIKLLGEPLDYRSYGSMIMAYIRAGVPEKGES 256
Query: 230 --------------EVFETLLDD-----------------EKSPLKPDQKMFNMMIYMYK 258
EV++ LL D + + + PD K+ ++I Y
Sbjct: 257 LLREMDSQEICAGREVYKALLRDYSMGGDAEGAKRVFDAVQIAGITPDVKLCGLLINAYS 316
Query: 259 KAGSYDKARKTFALMAERGIEQS 281
+G AR F M + GI+ +
Sbjct: 317 VSGQSQNARLAFENMRKAGIKAT 339
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 9/134 (6%)
Query: 139 KMDFIML---ITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEA 195
K D +ML I YGK G + A + M + NVVS +S++ Y G A
Sbjct: 252 KSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQR----NVVSWSSMIVGYAANGNTLEALE 307
Query: 196 IFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIY 255
FR+M++FG P+ +T+ +L V G +E + F + + L+P + ++
Sbjct: 308 CFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMM--KSEFELEPGLSHYGCIVD 365
Query: 256 MYKKAGSYDKARKT 269
+ + G +A+K
Sbjct: 366 LLSRDGQLKEAKKV 379
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 7/134 (5%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+T Y K GD GA +V M + ++V+ SL+ + + G + A +F +M++ G
Sbjct: 148 LVTFYSKCGDMEGARQVFDRMPEK----SIVAWNSLVSGFEQNGLADEAIQVFYQMRESG 203
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
EP + T+ +L Q V + ++ + L + K+ +I +Y + G
Sbjct: 204 FEPDSATFVSLLSACAQTGAVSLGSWVHQYIISE---GLDLNVKLGTALINLYSRCGDVG 260
Query: 265 KARKTFALMAERGI 278
KAR+ F M E +
Sbjct: 261 KAREVFDKMKETNV 274
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 104/255 (40%), Gaps = 19/255 (7%)
Query: 62 FKDAA------DEAEKKN---WWKLMEQIDQAGSAVS--VLSDEKLKNQTIPKDLVIGTL 110
F+D A DE KN W +++ ++G VS ++ DE + + +I
Sbjct: 156 FRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGY 215
Query: 111 VRFKQLKKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGY 170
V+ + +N +EI + + ++ + +I LG N + V +
Sbjct: 216 VKRGE---YNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHL 272
Query: 171 PPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEE 230
P V+ QTSL++ Y K G +A ++F R E A+ + I+ +E+ +
Sbjct: 273 PLTVILQTSLIDMYAKCGSIGDAWSVFYRASV--KETDALMWNAIIGGLASHGFIRESLQ 330
Query: 231 VFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
+F + +S + PD+ F ++ G +A F + E G E + Y ++
Sbjct: 331 LFHKM---RESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVD 387
Query: 291 FETNYKEVSNIYDQI 305
+ V + +D I
Sbjct: 388 VLSRAGLVKDAHDFI 402
>AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=1006
Length = 1006
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 160 KVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTF 219
K+ + NK P VV+ T L++A G NA IF +M+K P+ VT ++LK +
Sbjct: 750 KICRVANK----PLVVTYTGLIQACVDSGNIKNAAYIFDQMKKVCS-PNLVTCNIMLKAY 804
Query: 220 VQGDKFKEAEEVFETLLDDE---------KSPLKPDQKMFNMMI 254
+QG F+EA E+F+ + +D +S + PD FN M+
Sbjct: 805 LQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTML 848
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
Query: 173 NVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVF 232
NV ++L++ Y K GR N ++ +F M P + V + ++ F K KE +F
Sbjct: 422 NVHVGSALIDMYAKCGRINLSQIVFNMM----PTKNLVCWNSLMNGFSMHGKAKEVMSIF 477
Query: 233 ETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAER-GIEQSTVTYNSLMSF 291
E+L+ ++ LKPD F ++ + G D+ K F +M+E GI+ Y+ +++
Sbjct: 478 ESLM---RTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNL 534
Query: 292 ETNYKEVSNIYDQI 305
++ YD I
Sbjct: 535 LGRAGKLQEAYDLI 548
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 6/125 (4%)
Query: 149 YGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPS 208
Y K G + AEK A M +V+S T ++ YGK G + IF M + EP
Sbjct: 358 YLKCGLVDEAEKCFAEMQ----LKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPD 413
Query: 209 AVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARK 268
V Y +L KE EE+F LL E +KP + + ++ + +AG +A+
Sbjct: 414 EVCYLAVLSACSHSGMIKEGEELFSKLL--ETHGIKPRVEHYACVVDLLGRAGRLKEAKH 471
Query: 269 TFALM 273
M
Sbjct: 472 LIDTM 476
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 9/146 (6%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI Y K G + V M + NVVS +S++ A G ++A ++F RM++
Sbjct: 385 LINMYAKCGGLDATRDVFEKMPRR----NVVSWSSMINALSMHGEASDALSLFARMKQEN 440
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
EP+ VT+ +L +E +++F ++ D+ + P + + M+ ++ +A +
Sbjct: 441 VEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYN--ITPKLEHYGCMVDLFGRA---N 495
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
R+ ++ + + V + SLMS
Sbjct: 496 LLREALEVIESMPVASNVVIWGSLMS 521
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 98/231 (42%), Gaps = 14/231 (6%)
Query: 81 IDQAGSAVSVLSDEKLKNQTIPKDLVIGTLVRFKQLKK-WNLVIEILEWLRNQSWWDFGK 139
+++A +VL D + + + + V+ ++ ++L + W L E++E +F
Sbjct: 161 VEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVES-------EFDS 213
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
LI GD + ++L K G P L+ + + G Y +
Sbjct: 214 ERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHT 273
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M + PS YQ I+K K EA +F+ L D + PD+ ++ MI + +
Sbjct: 274 MIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYA---PDRVVYTTMIRGFCE 330
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNI---YDQILK 307
G ARK + M ++G+ + YN ++ E+S + Y+++L+
Sbjct: 331 KGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLR 381
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 53/92 (57%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
++I G+ K G+ + E M +NGY ++S ++++ + G+ + A IF+ M +
Sbjct: 358 VMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSET 417
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETL 235
G P+A+TY ++K F + +K ++ ++++ L
Sbjct: 418 GVTPNAITYNALIKGFCKENKVEKGLKLYKEL 449
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 70/166 (42%), Gaps = 6/166 (3%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ G ++ + A +L +M +G P+ ++ ++ K G A + M G
Sbjct: 145 LVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSG 204
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P +TY +++ + AE+ D ++ P + +++ + +
Sbjct: 205 SPPDVITYNTVIRCMFD---YGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSA 261
Query: 265 KARKTFALMAERGIEQSTVTYNSLMSFET---NYKEVSNIYDQILK 307
+A + MA G VTYNSL+++ N +EV+++ IL
Sbjct: 262 RAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILS 307
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 20/164 (12%)
Query: 143 IMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQK 202
+ ++ G K G A K+ LM G P VV T+++EA+ K + +A+ IFR+MQ
Sbjct: 135 VAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQN 194
Query: 203 FGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGS 262
G P+A +Y ++++ + +A +L+ SP P F ++
Sbjct: 195 NGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVP---TFVELVD------- 244
Query: 263 YDKARKTFALMAERGIEQSTVTYNSL--MSFETNYKEVSNIYDQ 304
AL +G+EQ+ ++L F N K V D+
Sbjct: 245 --------ALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMDK 280
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 20/164 (12%)
Query: 143 IMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQK 202
+ ++ G K G A K+ LM G P VV T+++EA+ K + +A+ IFR+MQ
Sbjct: 135 VAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQN 194
Query: 203 FGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGS 262
G P+A +Y ++++ + +A +L+ SP P F ++
Sbjct: 195 NGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVP---TFVELVD------- 244
Query: 263 YDKARKTFALMAERGIEQSTVTYNSL--MSFETNYKEVSNIYDQ 304
AL +G+EQ+ ++L F N K V D+
Sbjct: 245 --------ALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMDK 280
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 70/150 (46%), Gaps = 3/150 (2%)
Query: 158 AEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILK 217
AE V+ M K+G P+V ++++E + K A +F +M K + V IL+
Sbjct: 310 AESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQ 369
Query: 218 TFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERG 277
+ Q F EA ++F+ ++ + D+ +N+ K G ++A + F M +G
Sbjct: 370 CYCQMGNFSEAYDLFKEF---RETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKG 426
Query: 278 IEQSTVTYNSLMSFETNYKEVSNIYDQILK 307
I + Y +L+ + S+ +D +++
Sbjct: 427 IAPDVINYTTLIGGCCLQGKCSDAFDLMIE 456
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ Y K GD N AEKV + P + +++ AY G A A++R ++ G
Sbjct: 588 LVDMYAKCGDINKAEKVFGSKLYSELPLS----NAMISAYALYGNLKEAIALYRSLEGVG 643
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+P +T +L +A E+F ++ K +KP + + +M+ + AG +
Sbjct: 644 LKPDNITITNVLSACNHAGDINQAIEIFTDIVS--KRSMKPCLEHYGLMVDLLASAGETE 701
Query: 265 KARK 268
KA +
Sbjct: 702 KALR 705
>AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:744026-746407 REVERSE
LENGTH=793
Length = 793
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 9/155 (5%)
Query: 121 LVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSL 180
L+ ++L +R D G D+ +I + K G AEK L M G+ PN + S+
Sbjct: 620 LMSKLLREIREVQSLDAGVHDWNNVIHFFSKKGLMQDAEKALKRMRSLGHSPNAQTFHSM 679
Query: 181 MEAYGK-GGRYNNAEAIFRRMQKFGPEPSAVTY-----QLILKTFVQGDKFKEAEEVFET 234
+ Y G +Y ++ M+ S++ + +L TFV+G F A EV E
Sbjct: 680 VTGYAAIGSKYTEVTELWGEMKSIAAATSSMKFDQELLDAVLYTFVRGGFFSRANEVVEM 739
Query: 235 LLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKT 269
+ EK + D+ + M+ Y K KA K
Sbjct: 740 M---EKKNMFVDKYKYRMLFLKYHKTAYKGKAPKV 771
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%)
Query: 146 ITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGP 205
I G K D GA K+++ MNK G PNVV+ L++A K G + A+ +++ M+ G
Sbjct: 328 INGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGV 387
Query: 206 EPSAVTYQLILKTFVQGDKFKEAEEVFE 233
++ T+ +++ +++ D+ A + E
Sbjct: 388 NRNSHTFDIMISAYIEVDEVVCAHGLLE 415
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 75/159 (47%), Gaps = 9/159 (5%)
Query: 140 MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRR 199
++F I Y + G+ A V +M + NV+S +S++ A+G G + A F +
Sbjct: 348 VNFTSFIDMYARCGNIQMARTVFDMMPER----NVISWSSMINAFGINGLFEEALDCFHK 403
Query: 200 MQKFGPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKK 259
M+ P++VT+ +L KE + FE++ D + P+++ + M+ + +
Sbjct: 404 MKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYG--VVPEEEHYACMVDLLGR 461
Query: 260 AGSYDKARKTFALMAERGIEQSTVTYNSLMSFETNYKEV 298
AG +A+ M + + + + +L+S +KEV
Sbjct: 462 AGEIGEAKSFIDNMPVKPMASA---WGALLSACRIHKEV 497
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPP-NVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
LI + GD GA L LM ++G P + V+ +SL+++ + + + + R+ +F
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
EP +V Y ++ + + +AE+VFET+ + K D ++ M+ Y G
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETM----RRFGKRDVVSWSAMMACYGNNGRE 147
Query: 264 DKARKTFALMAERGIEQSTVTYNSLMSFETN 294
A K F E G+ + Y +++ +N
Sbjct: 148 LDAIKVFVEFLELGLVPNDYCYTAVIRACSN 178
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 11/146 (7%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ Y K + A +V + PN V T L Y K G A +F RM+ G
Sbjct: 201 LVDMYAKCDRISDARRVFEWI----VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG 256
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P + + ++ T+++ K K+A +F + PD +N+MI + K G
Sbjct: 257 HRPDHLAFVTVINTYIRLGKLKDARLLFGEM-------SSPDVVAWNVMISGHGKRGCET 309
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
A + F M + ++ + T S++S
Sbjct: 310 VAIEYFFNMRKSSVKSTRSTLGSVLS 335
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 11/164 (6%)
Query: 144 MLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKF 203
++I GY +LGD A + M + +VVS +++ Y G + +A +FR M+K
Sbjct: 213 VMIDGYMRLGDCKAARMLFDKMRQR----SVVSWNTMISGYSLNGFFKDAVEVFREMKKG 268
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSY 263
P+ VT +L + + E + L E S ++ D + + +I MY K G
Sbjct: 269 DIRPNYVTLVSVLPAISRLGSLELGEWLH---LYAEDSGIRIDDVLGSALIDMYSKCGII 325
Query: 264 DKARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYDQILK 307
+KA F ER ++ +T++++++ + + + D K
Sbjct: 326 EKAIHVF----ERLPRENVITWSAMINGFAIHGQAGDAIDCFCK 365
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 6/131 (4%)
Query: 165 MNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDK 224
M++ G N V+ T+L++ + G + A+ IF+ M G P +TY ++L + K
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 225 FKEA------EEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGI 278
++A E+ ++ +KP+ + MI + K G ++A F M E G
Sbjct: 67 LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGP 126
Query: 279 EQSTVTYNSLM 289
+ TYN+L+
Sbjct: 127 LPDSGTYNTLI 137
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQK-F 203
+I GYGK GD G+ ++ M K PN + TS++ A G G N + F M K +
Sbjct: 517 MIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDY 576
Query: 204 GPEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIY 255
PS Y ++ + + ++A ++ EK P++PD + F ++
Sbjct: 577 NFTPSTKHYTCMVDMLARAGELEQALDII------EKMPIQPDVRCFGAFLH 622
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 7/163 (4%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI+GY +LG + A + M ++G P+ + +++A G G EAI R + K G
Sbjct: 166 LISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEG 225
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
++ + + +A VF+ + P K D +N M+ Y G
Sbjct: 226 FGYDVYVLNALVVMYAKCGDIVKARNVFDMI------PHK-DYVSWNSMLTGYLHHGLLH 278
Query: 265 KARKTFALMAERGIEQSTVTYNSLMSFETNYKEVSNIYDQILK 307
+A F LM + GIE V +S+++ ++K ++ +++
Sbjct: 279 EALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWVIR 321
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 9/146 (6%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ Y G A +V M+K P + SL+ Y + G+Y +A A++ +M + G
Sbjct: 133 LVRLYASCGYAEVAHEVFDRMSKRDSSP--FAWNSLISGYAELGQYEDAMALYFQMAEDG 190
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
+P T+ +LK + E + L+ K D + N ++ MY K G
Sbjct: 191 VKPDRFTFPRVLKACGGIGSVQIGEAIHRDLV---KEGFGYDVYVLNALVVMYAKCGDIV 247
Query: 265 KARKTFALMAERGIEQSTVTYNSLMS 290
KAR F ++ + V++NS+++
Sbjct: 248 KARNVFDMIPHK----DYVSWNSMLT 269
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 8/124 (6%)
Query: 167 KNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFK 226
+ G NV+ +++L++ YGK G ++A ++ +M + +T+ +L Q + +
Sbjct: 390 RRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSI----RNMITWNAMLSALAQNGRGE 445
Query: 227 EAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAER-GIEQSTVTY 285
EA F ++ K +KPD F ++ G D+ R F LMA+ GI+ T Y
Sbjct: 446 EAVSFFNDMV---KKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHY 502
Query: 286 NSLM 289
+ ++
Sbjct: 503 SCMI 506
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 11/145 (7%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
L+ Y K GD + A+ V M+ +VVS TS++ Y + G A +F M++ G
Sbjct: 337 LLDMYSKCGDLDSAKAVFREMSDR----SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P T +L + E + V E + +++ L D + N ++ MY K GS
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEND---LGFDIFVSNALMDMYAKCGSMQ 449
Query: 265 KARKTFALMAERGIEQSTVTYNSLM 289
+A F+ M + I +++N+++
Sbjct: 450 EAELVFSEMRVKDI----ISWNTII 470
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 6/125 (4%)
Query: 145 LITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQTSLMEAYGKGGRYNNAEAIFRRMQKFG 204
LI GYG GD + K+ M K G PN V+ ++ A GG + FR MQ++
Sbjct: 307 LILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYN 366
Query: 205 PEPSAVTYQLILKTFVQGDKFKEAEEVFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYD 264
P Y + + +EAE+ E + P+KPD+ + ++ K G+ +
Sbjct: 367 IVPELKHYASVADCMSRAGLLEEAEKFLEDM------PVKPDEAVMGAVLSGCKVYGNVE 420
Query: 265 KARKT 269
+
Sbjct: 421 VGERV 425
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 83/188 (44%), Gaps = 15/188 (7%)
Query: 117 KKWNLVIEILEWLRNQSWWDFGKMDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVS 176
KK+ + +IL+ +++ S D +I YGK G + A ++ NG P +
Sbjct: 125 KKYESMWKILKQMKDLSL-DISGETLCFIIEQYGKNGHVDQAVELF-----NGVPKTLGC 178
Query: 177 Q------TSLMEAYGKGGRYNNAEAIFRRMQKFGPEPSAVTYQLILKTFVQGDKFKEAEE 230
Q SL+ A ++ A A+ RRM + G +P TY +++ + K KEA+E
Sbjct: 179 QQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQE 238
Query: 231 VFETLLDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLMS 290
+ + + P + +++I AG + A++ + M + G T+N L+
Sbjct: 239 FLDEM---SRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIE 295
Query: 291 FETNYKEV 298
+ EV
Sbjct: 296 AISKSGEV 303
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 12/174 (6%)
Query: 120 NLVIEILEWLRNQSWWDFGK-MDFIMLITGYGKLGDFNGAEKVLALMNKNGYPPNVVSQT 178
N IEIL + + W K +FI+ + KL F+ K+ K G +
Sbjct: 149 NRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKL--FDEIHKIFVSAPKLGVEIDACCLN 206
Query: 179 SLMEAYGKGGRYNNAEAIFRRMQKFGPE---PSAVTYQLILKTFVQGDKFKEAEEVFETL 235
L++ + G N EA + + +F + P+ +T+ +++ F KF+EA ++ E +
Sbjct: 207 ILIKGLCESG---NLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERM 263
Query: 236 LDDEKSPLKPDQKMFNMMIYMYKKAGSYDKARKTFALMAERGIEQSTVTYNSLM 289
EK ++PD FN++I +K G ++ M +G E + TY ++
Sbjct: 264 ---EKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVL 314