Miyakogusa Predicted Gene
- Lj5g3v2258480.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2258480.1 tr|Q7XE15|Q7XE15_ORYSJ Os10g0442700 protein
OS=Oryza sativa subsp. japonica GN=Os10g0442700 PE=2
SV=,24.85,7e-17,PPR,Pentatricopeptide repeat; no
description,Tetratricopeptide-like helical;
PPR_2,Pentatricopeptide,CUFF.57092.1
(526 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 615 e-176
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 382 e-106
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 381 e-106
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 361 e-100
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 354 9e-98
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 348 8e-96
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 345 4e-95
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 340 1e-93
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 340 2e-93
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 337 1e-92
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 337 1e-92
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 336 2e-92
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 1e-90
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 327 1e-89
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 5e-89
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 325 6e-89
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 320 2e-87
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 320 2e-87
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 318 9e-87
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 315 5e-86
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 312 3e-85
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 311 7e-85
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 310 1e-84
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 308 4e-84
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 5e-84
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 307 1e-83
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 5e-83
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 305 5e-83
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 1e-82
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 302 4e-82
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 302 5e-82
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 298 5e-81
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 294 1e-79
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 3e-79
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 8e-79
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 291 9e-79
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 1e-78
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 2e-78
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 5e-78
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 288 9e-78
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 283 3e-76
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 6e-76
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 7e-76
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 8e-76
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 281 9e-76
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 5e-74
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 6e-74
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 7e-74
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 7e-74
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 9e-74
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 273 2e-73
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 4e-73
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 1e-72
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 3e-72
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 269 3e-72
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 4e-72
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 6e-72
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 1e-71
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 267 1e-71
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 267 1e-71
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 4e-71
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 264 1e-70
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 1e-70
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 4e-70
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 262 4e-70
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 262 5e-70
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 260 2e-69
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 2e-69
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 259 3e-69
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 4e-69
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 4e-69
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 5e-69
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 7e-69
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 2e-68
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 4e-68
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 6e-68
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 8e-68
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 2e-67
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 252 5e-67
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 252 5e-67
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 7e-67
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 9e-67
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 1e-66
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 2e-66
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 3e-66
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 249 4e-66
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 6e-66
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 6e-66
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 247 1e-65
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 2e-65
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 246 2e-65
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 246 2e-65
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 244 1e-64
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 239 3e-63
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 3e-63
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 3e-63
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 4e-63
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 5e-63
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 9e-63
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 1e-62
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 237 2e-62
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 2e-62
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 235 6e-62
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 6e-62
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 9e-62
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 1e-61
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 2e-61
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 233 2e-61
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 4e-61
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 231 6e-61
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 8e-61
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 231 1e-60
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 3e-60
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 4e-60
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 229 4e-60
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 1e-59
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 1e-59
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 2e-59
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 227 2e-59
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 4e-59
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 5e-59
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 5e-59
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 5e-59
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 6e-59
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 7e-59
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 224 9e-59
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 224 1e-58
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 1e-58
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 224 1e-58
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 4e-58
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 4e-58
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 2e-57
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 4e-57
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 5e-57
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 6e-57
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 6e-57
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 1e-56
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 2e-56
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 216 2e-56
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 216 3e-56
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 214 1e-55
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 214 2e-55
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 213 4e-55
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 9e-54
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 207 1e-53
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 1e-53
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 5e-53
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 8e-53
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 4e-52
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 201 9e-52
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 4e-51
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 199 6e-51
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 1e-50
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 197 1e-50
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 4e-50
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 8e-50
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 4e-48
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 5e-48
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 8e-48
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 2e-47
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 4e-46
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 3e-45
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 1e-44
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 1e-44
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 1e-44
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 1e-44
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 2e-41
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 3e-41
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 2e-40
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 164 2e-40
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 9e-38
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 8e-32
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 1e-31
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 134 1e-31
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 1e-30
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 124 2e-28
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 123 3e-28
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 5e-28
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 121 1e-27
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 120 3e-27
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 4e-25
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 4e-25
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 6e-24
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 3e-23
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 105 7e-23
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 1e-22
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 103 3e-22
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 2e-21
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 100 3e-21
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 6e-21
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 6e-21
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 3e-20
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 97 4e-20
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 5e-20
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 96 7e-20
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 9e-20
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 9e-20
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 9e-20
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 1e-19
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 4e-19
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 7e-19
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 7e-19
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 3e-18
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 90 4e-18
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 1e-17
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 82 8e-16
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 80 4e-15
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 80 5e-15
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 79 6e-15
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 79 8e-15
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 8e-15
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 74 2e-13
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 72 9e-13
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 72 9e-13
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 71 2e-12
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 70 5e-12
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 67 2e-11
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 67 3e-11
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 9e-11
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 65 1e-10
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 64 2e-10
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 61 2e-09
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 61 2e-09
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 60 3e-09
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 53 4e-07
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 51 2e-06
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 51 2e-06
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 51 2e-06
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 51 2e-06
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 6e-06
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 8e-06
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 615 bits (1585), Expect = e-176, Method: Compositional matrix adjust.
Identities = 292/503 (58%), Positives = 387/503 (76%), Gaps = 1/503 (0%)
Query: 24 CKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWN 83
CKSM EL ++H +LIT GLS++EPF+S+ L FSALS+SGD+DY+Y+ S+LS P + WN
Sbjct: 18 CKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWN 77
Query: 84 TIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKT 143
+IRG+SNS+NP +S+S++++MLR GL PD++TYPFL K+S+RL N++ G S+H ++K+
Sbjct: 78 FVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKS 137
Query: 144 GHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVF 203
G E+D FI N+LIHMY S + A K+FD + KNLV+WNS+LD YAK G++V A VF
Sbjct: 138 GLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVF 197
Query: 204 ESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGP-KANEVTMVSVLCACAHLGAL 262
+ MSERDV +WSS+IDGYVK GEY +A+ +F++M +G KANEVTMVSV+CACAHLGAL
Sbjct: 198 DEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGAL 257
Query: 263 EKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIG 322
+GK +H+YI+D LPLT++LQTSL+DMYAKCG+I +A VF+ S ++TD L+WNA+IG
Sbjct: 258 NRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIG 317
Query: 323 GLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTP 382
GLA+HG + ESL LF M+ I DE+T+ HGGLVKEAWHFF+SL + G P
Sbjct: 318 GLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEP 377
Query: 383 SSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKL 442
SEHYACMVDVL+RAG + A+ FI +MP++PT SMLGALL+GCINH N ELAE VG+KL
Sbjct: 378 KSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKL 437
Query: 443 IELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAH 502
IEL+P +DGRY+GL+NVYA K++ AR MREAME++GVKK G S +++ G RFIAH
Sbjct: 438 IELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAH 497
Query: 503 DKTHSDSEETYSMLNFVAYQMKL 525
DKTH S++ Y++L M L
Sbjct: 498 DKTHFHSDKIYAVLQLTGAWMNL 520
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/517 (39%), Positives = 307/517 (59%), Gaps = 6/517 (1%)
Query: 1 MPGVSPSFKIA-NLNQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALS 59
M +S SF + NL +T+ S L C ELKQ+HA ++ +GL QD I+K L F S
Sbjct: 1 MNVISCSFSLEHNLYETM-SCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISS 59
Query: 60 NSGD-IDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYP 118
S D + Y+ F P F+WN +IRG+S S P +SL ++ +ML + T+P
Sbjct: 60 TSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFP 119
Query: 119 FLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK 178
L KA + L E +HA I K G+E D + NSLI+ YA GN AH +FD + E
Sbjct: 120 SLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEP 179
Query: 179 NLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMR 238
+ VSWNS++ GY K G+M +A +F M+E++ SW+++I GYV+A +EA+ +F +M+
Sbjct: 180 DDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQ 239
Query: 239 AVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIE 298
+ + V++ + L ACA LGALE+GK +H Y+ + + VL L+DMYAKCG +E
Sbjct: 240 NSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEME 299
Query: 299 EALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXX 358
EAL VF + K+ V W A+I G A HG E++ F +MQ +GIK + +T+
Sbjct: 300 EALEVFKNIKKK--SVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTA 357
Query: 359 XXHGGLVKEAWHFFESLDK-CGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTAS 417
+ GLV+E F S+++ + P+ EHY C+VD+L RAG L A +FI +MP++P A
Sbjct: 358 CSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAV 417
Query: 418 MLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAME 477
+ GALL C H+N EL E +G LI ++P H GRY+ +N++A K+WD A R M+
Sbjct: 418 IWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMK 477
Query: 478 RRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYS 514
+GV K PG S++ + G + F+A D++H + E+ S
Sbjct: 478 EQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQS 514
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/523 (37%), Positives = 318/523 (60%), Gaps = 16/523 (3%)
Query: 18 LSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGD-----IDYSYRAFS 72
L+LL C S +LK +H L+ + L D S++L ++ + + Y+Y FS
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
Q+ +P +F++N +IR +S P ++ + +ML+ + PD +T+PFL KAS+ +
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G H+ I++ G + D +++NSL+HMYA+CG I A ++F + +++VSW SM+ GY K
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
CG + A ++F+ M R++ +WS +I+GY K + +A+ +FE M+ G ANE MVSV
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT 312
+ +CAHLGALE G+ ++Y+V + + + L+L T+LVDM+ +CG IE+A+ VF G+ +T
Sbjct: 256 ISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLP--ET 313
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFF 372
D L W+++I GLA HG +++ F M ++G +VT+ HGGLV++ +
Sbjct: 314 DSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIY 373
Query: 373 ESLDK-CGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRN 431
E++ K G+ P EHY C+VD+L RAG+LA A FI +M ++P A +LGALL C ++N
Sbjct: 374 ENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKN 433
Query: 432 FELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVE 491
E+AE VG LI+++P+H G Y+ LSN+YA +WD +R+ M+ + VKK PG+S +E
Sbjct: 434 TEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIE 493
Query: 492 ICGVSRRF-IAHDKTHSDS-------EETYSMLNFVAYQMKLG 526
I G +F + D+ H + EE + + Y+ G
Sbjct: 494 IDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTG 536
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 361 bits (926), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/513 (38%), Positives = 304/513 (59%), Gaps = 7/513 (1%)
Query: 15 QTLLSLLDG-CKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQ 73
T L L+D C +M ELKQ+HA LI +GL D S+VL F S S D++Y+Y F++
Sbjct: 25 NTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPS-DMNYAYLVFTR 83
Query: 74 LSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKML--RHGLAPDYLTYPFLAKASARLLNQE 131
++ F+WNTIIRG+S S P ++SIF+ ML + P LTYP + KA RL
Sbjct: 84 INHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQAR 143
Query: 132 TGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYA 191
G +H +IK G E D FI+N+++HMY +CG ++ A ++F + ++V+WNSM+ G+A
Sbjct: 144 DGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFA 203
Query: 192 KCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVS 251
KCG + A +F+ M +R+ SW+S+I G+V+ G +++A+ +F +M+ K + TMVS
Sbjct: 204 KCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVS 263
Query: 252 VLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRK 311
+L ACA+LGA E+G+ +H+YIV N L ++ T+L+DMY KCG IEE L VF K++
Sbjct: 264 LLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQ 323
Query: 312 TDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHF 371
WN+MI GLA +G E ++ LF +++ G++ D V++ H G V A F
Sbjct: 324 LSC--WNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEF 381
Query: 372 FESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHR 430
F + +K + PS +HY MV+VL AG L A I MP+E + +LLS C
Sbjct: 382 FRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIG 441
Query: 431 NFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSV 490
N E+A+ + L +L+PD Y+ LSN YA +++A R M+ R ++K G SS+
Sbjct: 442 NVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSI 501
Query: 491 EICGVSRRFIAHDKTHSDSEETYSMLNFVAYQM 523
E+ FI+ TH S E YS+L+ + + +
Sbjct: 502 EVDFEVHEFISCGGTHPKSAEIYSLLDILNWDV 534
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 354 bits (908), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 186/540 (34%), Positives = 291/540 (53%), Gaps = 34/540 (6%)
Query: 18 LSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSP 77
LSLL+ CK++ L Q+H + I G+ D F K++ A+S S + Y+ R P
Sbjct: 9 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEP 68
Query: 78 RIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLA-PDYLTYPFLAKASARLLNQETGVSV 136
F++NT++RGYS S P S+++F++M+R G PD ++ F+ KA + TG +
Sbjct: 69 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 128
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLV--------------- 181
H +K G E F+ +LI MY CG + +A KVFD + + NLV
Sbjct: 129 HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDV 188
Query: 182 ----------------SWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAG 225
SWN ML GY K GE+ A ++F M RD SWS++I G G
Sbjct: 189 AGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNG 248
Query: 226 EYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQT 285
+ E+ F +++ G NEV++ VL AC+ G+ E GK++H ++ G + +
Sbjct: 249 SFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNN 308
Query: 286 SLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGI 345
+L+DMY++CG + A LVF G+ +++ ++ W +MI GLA HG EE++ LF +M A G+
Sbjct: 309 ALIDMYSRCGNVPMARLVFEGMQEKRC-IVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGV 367
Query: 346 KADEVTYXXXXXXXXHGGLVKEAWHFFESLDKC-GMTPSSEHYACMVDVLARAGQLATAY 404
D +++ H GL++E +F + + + P EHY CMVD+ R+G+L AY
Sbjct: 368 TPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAY 427
Query: 405 QFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVK 464
FICQMP+ PTA + LL C +H N ELAE V ++L EL+P++ G + LSN YA
Sbjct: 428 DFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAG 487
Query: 465 RWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
+W D +R++M + +KK+ +S VE+ +F A +K E + L + ++K
Sbjct: 488 KWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLK 547
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 348 bits (892), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 186/512 (36%), Positives = 297/512 (58%), Gaps = 5/512 (0%)
Query: 18 LSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSP 77
++LLD + E++Q+HA L G +D+ + + ALS+ +DY+ + + P
Sbjct: 10 IALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKP 69
Query: 78 RIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHG--LAPDYLTYPFLAKASARLLNQETGVS 135
+F N++IR + S P +S + ++L G L PD T FL +A L +ETG+
Sbjct: 70 TLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQ 129
Query: 136 VHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGE 195
VH I+ G + D +Q LI +YA G + HKVF+S+ + V +M+ A+CG+
Sbjct: 130 VHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGD 189
Query: 196 MVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCA 255
+V A K+FE M ERD +W+++I GY + GE REA+ VF M+ G K N V M+SVL A
Sbjct: 190 VVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSA 249
Query: 256 CAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVL 315
C LGAL++G+ H YI N + +T+ L T+LVD+YAKCG +E+A+ VF G+ ++ +V
Sbjct: 250 CTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEK--NVY 307
Query: 316 IWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESL 375
W++ + GLA +G E+ L LF M+ G+ + VT+ G V E F+S+
Sbjct: 308 TWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSM 367
Query: 376 -DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFEL 434
++ G+ P EHY C+VD+ ARAG+L A I QMPM+P A++ +LL ++N EL
Sbjct: 368 RNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLEL 427
Query: 435 AEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICG 494
+ +K++ELE + G Y+ LSN+YA WD+ +R++M+ +GV+K PG S +E+ G
Sbjct: 428 GVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNG 487
Query: 495 VSRRFIAHDKTHSDSEETYSMLNFVAYQMKLG 526
F DK+H + ++ ++ +++L
Sbjct: 488 EVHEFFVGDKSHPKYTQIDAVWKDISRRLRLA 519
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 345 bits (886), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 185/502 (36%), Positives = 298/502 (59%), Gaps = 7/502 (1%)
Query: 26 SMLELKQ-LHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNT 84
S L L Q LH + + S + D F++ L S GD+D + + F+ + + WN+
Sbjct: 145 SSLSLGQSLHGMAVKSAVGSD-VFVANSLIHCYFS-CGDLDSACKVFTTIKEKDVVSWNS 202
Query: 85 IIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTG 144
+I G+ +P ++L +F KM + ++T + A A++ N E G V ++I +
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR 262
Query: 145 HEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFE 204
+ + N+++ MY CG+I A ++FD+++EK+ V+W +MLDGYA + A +V
Sbjct: 263 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 322
Query: 205 SMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMR-AVGPKANEVTMVSVLCACAHLGALE 263
SM ++D+ +W++LI Y + G+ EA+ VF +++ K N++T+VS L ACA +GALE
Sbjct: 323 SMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALE 382
Query: 264 KGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGG 323
G+ +H YI +G+ + + ++L+ MY+KCG +E++ VF+ V KR DV +W+AMIGG
Sbjct: 383 LGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKR--DVFVWSAMIGG 440
Query: 324 LATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLD-KCGMTP 382
LA HG E++ +F MQ +K + VT+ H GLV EA F ++ G+ P
Sbjct: 441 LAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVP 500
Query: 383 SSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKL 442
+HYAC+VDVL R+G L A +FI MP+ P+ S+ GALL C H N LAE+ +L
Sbjct: 501 EEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRL 560
Query: 443 IELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAH 502
+ELEP +DG ++ LSN+YA + +W++ +R+ M G+KK PG SS+EI G+ F++
Sbjct: 561 LELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSG 620
Query: 503 DKTHSDSEETYSMLNFVAYQMK 524
D H SE+ Y L+ V ++K
Sbjct: 621 DNAHPMSEKVYGKLHEVMEKLK 642
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 219/446 (49%), Gaps = 66/446 (14%)
Query: 18 LSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSP 77
+SL++ C S+ +LKQ H +I +G D SK+ +ALS+ ++Y+ + F ++ P
Sbjct: 34 ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 93
Query: 78 RIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLA-PDYLTYPFLAKASARLLNQETGVSV 136
F WNT+IR Y++ +P+ S+ FL M+ P+ T+PFL KA+A + + G S+
Sbjct: 94 NSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 153
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEM 196
H +K+ D F+ NSLIH Y SCG++ A KVF +++EK++VSWNSM++G+ +
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ---- 209
Query: 197 VLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCAC 256
G +A+ +F+KM + KA+ VTMV VL AC
Sbjct: 210 ---------------------------KGSPDKALELFKKMESEDVKASHVTMVGVLSAC 242
Query: 257 AHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR------ 310
A + LE G+ + YI +N + + L L +++DMY KCG+IE+A +F + ++
Sbjct: 243 AKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWT 302
Query: 311 -----------------------KTDVLIWNAMIGGLATHGSVEESLGLFKDMQ-AVGIK 346
+ D++ WNA+I +G E+L +F ++Q +K
Sbjct: 303 TMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMK 362
Query: 347 ADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQF 406
+++T G ++ + K G+ + + ++ + ++ G L + +
Sbjct: 363 LNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREV 422
Query: 407 ICQMPMEPT---ASMLGAL-LSGCIN 428
+ ++M+G L + GC N
Sbjct: 423 FNSVEKRDVFVWSAMIGGLAMHGCGN 448
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 340 bits (873), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 181/455 (39%), Positives = 278/455 (61%), Gaps = 11/455 (2%)
Query: 80 FIWNTIIRGYSNSKNPIQ---SLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
F+WN IIR ++ + Q +S++L+M H ++PD+ T+PFL + L+ G
Sbjct: 25 FLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRT 84
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEM 196
HA I+ G + D F++ SL++MY+SCG++ A +VFD K+L +WNS+++ YAK G +
Sbjct: 85 HAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLI 144
Query: 197 VLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGP-----KANEVTMVS 251
A K+F+ M ER+V SWS LI+GYV G+Y+EA+ +F +M+ P + NE TM +
Sbjct: 145 DDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMST 204
Query: 252 VLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRK 311
VL AC LGALE+GK +H YI + + +VL T+L+DMYAKCG++E A VF+ + +K
Sbjct: 205 VLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKK 264
Query: 312 TDVLIWNAMIGGLATHGSVEESLGLFKDMQAV-GIKADEVTYXXXXXXXXHGGLVKEAWH 370
DV ++AMI LA +G +E LF +M I + VT+ H GL+ E
Sbjct: 265 -DVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKS 323
Query: 371 FFESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINH 429
+F+ + ++ G+TPS +HY CMVD+ R+G + A FI MPMEP + G+LLSG
Sbjct: 324 YFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRML 383
Query: 430 RNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSS 489
+ + E ++LIEL+P + G Y+ LSNVYA RW + + +R ME +G+ K PG S
Sbjct: 384 GDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSY 443
Query: 490 VEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
VE+ GV F+ D++ +SE Y+ML+ + +++
Sbjct: 444 VEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLR 478
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 150/331 (45%), Gaps = 45/331 (13%)
Query: 19 SLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPR 78
SLL+ S +L+ + SG S+D P + V+ +A + +G ID + + F ++
Sbjct: 102 SLLNMYSSCGDLRSAQRVFDDSG-SKDLPAWNSVV--NAYAKAGLIDDARKLFDEMPERN 158
Query: 79 IFIWNTIIRGYSNSKNPIQSLSIFLKML-----RHGLAPDYLTYPFLAKASARLLNQETG 133
+ W+ +I GY ++L +F +M + P+ T + A RL E G
Sbjct: 159 VISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQG 218
Query: 134 VSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKC 193
VHA+I K E D + +LI MYA CG++ A +VF+++
Sbjct: 219 KWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG----------------- 261
Query: 194 GEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRA---VGPKANEVTMV 250
S++DV+++S++I G E +F +M + P N VT V
Sbjct: 262 -------------SKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINP--NSVTFV 306
Query: 251 SVLCACAHLGALEKGKMMHKYIVDN-GLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSK 309
+L AC H G + +GK K +++ G+ ++ +VD+Y + G I+EA F
Sbjct: 307 GILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEA-ESFIASMP 365
Query: 310 RKTDVLIWNAMIGGLATHGSVEESLGLFKDM 340
+ DVLIW +++ G G ++ G K +
Sbjct: 366 MEPDVLIWGSLLSGSRMLGDIKTCEGALKRL 396
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 173/498 (34%), Positives = 293/498 (58%), Gaps = 6/498 (1%)
Query: 10 IANLNQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYR 69
I + + L KS E K+++A +I GLSQ ++K++ F D+DY+ R
Sbjct: 6 IREVENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFC--DKIEDMDYATR 63
Query: 70 AFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLA-PDYLTYPFLAKASARLL 128
F+Q+S+P +F++N+IIR Y+++ + I+ ++LR PD T+PF+ K+ A L
Sbjct: 64 LFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLG 123
Query: 129 NQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLD 188
+ G VH H+ K G + +N+LI MY ++V AHKVFD + E++++SWNS+L
Sbjct: 124 SCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLS 183
Query: 189 GYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVT 248
GYA+ G+M A +F M ++ + SW+++I GY G Y EAM F +M+ G + +E++
Sbjct: 184 GYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEIS 243
Query: 249 MVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVS 308
++SVL +CA LG+LE GK +H Y G + +L++MY+KCG I +A+ +F +
Sbjct: 244 LISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQME 303
Query: 309 KRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEA 368
+ DV+ W+ MI G A HG+ ++ F +MQ +K + +T+ H G+ +E
Sbjct: 304 GK--DVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEG 361
Query: 369 WHFFESLDK-CGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCI 427
+F+ + + + P EHY C++DVLARAG+L A + MPM+P + + G+LLS C
Sbjct: 362 LRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCR 421
Query: 428 NHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGF 487
N ++A + L+ELEP+ G Y+ L+N+YA + +W+D +R+ + +KK+PG
Sbjct: 422 TPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGG 481
Query: 488 SSVEICGVSRRFIAHDKT 505
S +E+ + + F++ D +
Sbjct: 482 SLIEVNNIVQEFVSGDNS 499
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 337 bits (864), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 184/525 (35%), Positives = 303/525 (57%), Gaps = 15/525 (2%)
Query: 3 GVSPSFKIANLNQTLLSLLDGCK----SMLELKQLHAILITSGLSQDEPFISKVLCFSAL 58
GV+P + T LL+G K ++ K+LH ++ GL + ++ L
Sbjct: 129 GVTPD------SHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSN-LYVQNAL-VKMY 180
Query: 59 SNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYP 118
S G +D + F + +F WN +I GY+ K +S+ + ++M R+ ++P +T
Sbjct: 181 SLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLL 240
Query: 119 FLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK 178
+ A +++ +++ VH ++ + E ++N+L++ YA+CG + A ++F S++ +
Sbjct: 241 LVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR 300
Query: 179 NLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMR 238
+++SW S++ GY + G + LA F+ M RD SW+ +IDGY++AG + E++ +F +M+
Sbjct: 301 DVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQ 360
Query: 239 AVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIE 298
+ G +E TMVSVL ACAHLG+LE G+ + YI N + +V+ +L+DMY KCG E
Sbjct: 361 SAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSE 420
Query: 299 EALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXX 358
+A VFH + +R D W AM+ GLA +G +E++ +F MQ + I+ D++TY
Sbjct: 421 KAQKVFHDMDQR--DKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSA 478
Query: 359 XXHGGLVKEAWHFFESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTAS 417
H G+V +A FF + + PS HY CMVD+L RAG + AY+ + +MPM P +
Sbjct: 479 CNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSI 538
Query: 418 MLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAME 477
+ GALL H + +AE+ +K++ELEPD+ Y L N+YAG KRW D R +R +
Sbjct: 539 VWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIV 598
Query: 478 RRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQ 522
+KK+PGFS +E+ G + F+A DK+H SEE Y L +A +
Sbjct: 599 DVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQE 643
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 181/394 (45%), Gaps = 41/394 (10%)
Query: 10 IANLNQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYR 69
I+N +S+L CK+ + KQLH+ IT G++ + F K+ F G + Y+Y+
Sbjct: 30 ISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYK 89
Query: 70 AFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLN 129
F ++ P + +WN +I+G+S + + ++L ML+ G+ PD T+PFL R
Sbjct: 90 LFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGG 149
Query: 130 Q-ETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLD 188
G +H H++K G + ++QN+L+ MY+ CG + A VFD ++++ SWN M
Sbjct: 150 ALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLM-- 207
Query: 189 GYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVT 248
I GY + EY E++ + +M VT
Sbjct: 208 -----------------------------ISGYNRMKEYEESIELLVEMERNLVSPTSVT 238
Query: 249 MVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVS 308
++ VL AC+ + + K +H+Y+ + +L L+ +LV+ YA CG ++ A+ +F +
Sbjct: 239 LLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMK 298
Query: 309 KRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEA 368
R DV+ W +++ G G+++ + F M D +++ G E+
Sbjct: 299 AR--DVISWTSIVKGYVERGNLKLARTYFDQMPV----RDRISWTIMIDGYLRAGCFNES 352
Query: 369 WHFFESLDKCGMTPSSEHYACMVDVLARAGQLAT 402
F + GM P MV VL L +
Sbjct: 353 LEIFREMQSAGMIPDE---FTMVSVLTACAHLGS 383
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 111/263 (42%), Gaps = 9/263 (3%)
Query: 174 SVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAV 233
+ Q+K V W S L G+ A+K+F + E DV W+++I G+ K E + +
Sbjct: 67 TFQKKLFVFWCSRLGGHVS-----YAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRL 121
Query: 234 FEKMRAVGPKANEVTMVSVLCACAHLG-ALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYA 292
+ M G + T +L G AL GK +H ++V GL L +Q +LV MY+
Sbjct: 122 YLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYS 181
Query: 293 KCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
CG ++ A VF + K DV WN MI G EES+ L +M+ + VT
Sbjct: 182 LCGLMDMARGVFD--RRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTL 239
Query: 353 XXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPM 412
E + +C PS +V+ A G++ A + M
Sbjct: 240 LLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKA 299
Query: 413 EPTASMLGALLSGCINHRNFELA 435
S +++ G + N +LA
Sbjct: 300 RDVISWT-SIVKGYVERGNLKLA 321
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 337 bits (864), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 169/468 (36%), Positives = 274/468 (58%), Gaps = 3/468 (0%)
Query: 58 LSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTY 117
++ GD++ + + F + + WN +I GY +++ ++ M G+ PD +T
Sbjct: 201 FASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTM 260
Query: 118 PFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQE 177
L + + L + G + ++ + G + N+L+ M++ CG+I A ++FD++++
Sbjct: 261 IGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEK 320
Query: 178 KNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKM 237
+ +VSW +M+ GYA+CG + ++ K+F+ M E+DV W+++I G V+A ++A+A+F++M
Sbjct: 321 RTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEM 380
Query: 238 RAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAI 297
+ K +E+TM+ L AC+ LGAL+ G +H+YI L L + L TSLVDMYAKCG I
Sbjct: 381 QTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNI 440
Query: 298 EEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXX 357
EAL VFHG+ R + L + A+IGGLA HG ++ F +M GI DE+T+
Sbjct: 441 SEALSVFHGIQTRNS--LTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLS 498
Query: 358 XXXHGGLVKEAWHFFESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTA 416
HGG+++ +F + + + P +HY+ MVD+L RAG L A + + MPME A
Sbjct: 499 ACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADA 558
Query: 417 SMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAM 476
++ GALL GC H N EL E +KL+EL+P G Y+ L +Y W+DA+ R M
Sbjct: 559 AVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMM 618
Query: 477 ERRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
RGV+K PG SS+E+ G+ FI DK+ +SE+ Y L+ + M+
Sbjct: 619 NERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMR 666
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 137/423 (32%), Positives = 215/423 (50%), Gaps = 63/423 (14%)
Query: 13 LNQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
L+ LLSLL+ CK +L LKQ+ A +I +GL D S+++ F ALS S +DYS +
Sbjct: 52 LHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILK 111
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLA---PDYLTYPFLAKASARLLN 129
+ +P IF WN IRG+S S+NP +S ++ +MLRHG PD+ TYP L K A L
Sbjct: 112 GIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRL 171
Query: 130 QETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDG 189
G + H++K E + N+ IHM+ASCG++ A KVFD ++LVSWN +++G
Sbjct: 172 SSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLING 231
Query: 190 YAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTM 249
Y K GE +A+ V++ M + G K ++VTM
Sbjct: 232 YKKIGEA-------------------------------EKAIYVYKLMESEGVKPDDVTM 260
Query: 250 VSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSK 309
+ ++ +C+ LG L +GK ++Y+ +NGL +T+ L +L+DM++KCG I EA +F + K
Sbjct: 261 IGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEK 320
Query: 310 R-----------------------------KTDVLIWNAMIGGLATHGSVEESLGLFKDM 340
R + DV++WNAMIGG +++L LF++M
Sbjct: 321 RTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEM 380
Query: 341 QAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQL 400
Q K DE+T G + ++K ++ + +VD+ A+ G +
Sbjct: 381 QTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNI 440
Query: 401 ATA 403
+ A
Sbjct: 441 SEA 443
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 135/320 (42%), Gaps = 39/320 (12%)
Query: 13 LNQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
L L+ + C + E +++ L + +S S + G +D S + F
Sbjct: 294 LVNALMDMFSKCGDIHEARRIFDNL------EKRTIVSWTTMISGYARCGLLDVSRKLFD 347
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
+ + +WN +I G +K +L++F +M PD +T A ++L +
Sbjct: 348 DMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDV 407
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G+ +H +I K + + SL+ MYA CGNI A VF +Q +N +
Sbjct: 408 GIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSL----------- 456
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
+++++I G G+ A++ F +M G +E+T + +
Sbjct: 457 --------------------TYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGL 496
Query: 253 LCACAHLGALEKGKMMHKYIVDN-GLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRK 311
L AC H G ++ G+ + L L + +VD+ + G +EEA + + +
Sbjct: 497 LSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPM-E 555
Query: 312 TDVLIWNAMIGGLATHGSVE 331
D +W A++ G HG+VE
Sbjct: 556 ADAAVWGALLFGCRMHGNVE 575
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 336 bits (862), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 181/530 (34%), Positives = 300/530 (56%), Gaps = 22/530 (4%)
Query: 17 LLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSN--SGDIDYSYRAFSQL 74
L ++ C+++ +L Q+HA+ I SG +D +++L F A S+ D+DY+++ F+Q+
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQM 85
Query: 75 SSPRIFIWNTIIRGYSNSK--NPIQSLSIFLKMLRHGLA-PDYLTYPFLAKASARLLNQE 131
F WNTIIRG+S S + ++++F +M+ P+ T+P + KA A+ +
Sbjct: 86 PQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQ 145
Query: 132 TGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVF-DSVQEKNLVS-------- 182
G +H +K G D F+ ++L+ MY CG + A +F ++ EK++V
Sbjct: 146 EGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRD 205
Query: 183 -----WNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKM 237
WN M+DGY + G+ A +F+ M +R V SW+++I GY G +++A+ VF +M
Sbjct: 206 GEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM 265
Query: 238 RAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAI 297
+ + N VT+VSVL A + LG+LE G+ +H Y D+G+ + VL ++L+DMY+KCG I
Sbjct: 266 KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGII 325
Query: 298 EEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXX 357
E+A+ VF + + +V+ W+AMI G A HG +++ F M+ G++ +V Y
Sbjct: 326 EKAIHVFERLPRE--NVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLT 383
Query: 358 XXXHGGLVKEAWHFFESLDKC-GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTA 416
HGGLV+E +F + G+ P EHY CMVD+L R+G L A +FI MP++P
Sbjct: 384 ACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDD 443
Query: 417 SMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAM 476
+ ALL C N E+ + V L+++ P G Y+ LSN+YA W + MR M
Sbjct: 444 VIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRM 503
Query: 477 ERRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMKLG 526
+ + ++K PG S ++I GV F+ D +H ++E SML ++ +++L
Sbjct: 504 KEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLA 553
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 330 bits (847), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 184/514 (35%), Positives = 296/514 (57%), Gaps = 44/514 (8%)
Query: 9 KIANLNQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCF--SALSNSGDIDY 66
K NL QT G S+ +L+Q+HA I G+S + + K L F +L + + Y
Sbjct: 17 KCINLLQTY-----GVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSY 71
Query: 67 SYRAFSQLSSP-RIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLA-PDYLTYPFLAKAS 124
+++ FS++ P +FIWNT+IRGY+ N I + S++ +M GL PD TYPFL KA
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 125 ARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWN 184
+ + G ++H+ +I++G ++QNSL+H+YA+
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYAN----------------------- 168
Query: 185 SMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKA 244
CG++ A+KVF+ M E+D+ +W+S+I+G+ + G+ EA+A++ +M + G K
Sbjct: 169 --------CGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKP 220
Query: 245 NEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVF 304
+ T+VS+L ACA +GAL GK +H Y++ GL L L+D+YA+CG +EEA +F
Sbjct: 221 DGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLF 280
Query: 305 HGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAV-GIKADEVTYXXXXXXXXHGG 363
+ + + + W ++I GLA +G +E++ LFK M++ G+ E+T+ H G
Sbjct: 281 DEMVDKNS--VSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCG 338
Query: 364 LVKEAWHFFESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGAL 422
+VKE + +F + ++ + P EH+ CMVD+LARAGQ+ AY++I MPM+P + L
Sbjct: 339 MVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTL 398
Query: 423 LSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVK 482
L C H + +LAE ++++LEP+H G Y+ LSN+YA +RW D + +R+ M R GVK
Sbjct: 399 LGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVK 458
Query: 483 KSPGFSSVEICGVSRRFIAHDKTHSDSEETYSML 516
K PG S VE+ F+ DK+H S+ Y+ L
Sbjct: 459 KVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKL 492
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 327 bits (838), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 192/555 (34%), Positives = 298/555 (53%), Gaps = 41/555 (7%)
Query: 5 SPSFKIANLNQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDI 64
S S +A N L ++ C + L+ A +I + L+QD +++ + +A ++ +
Sbjct: 766 SASLSLAPPN--LKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFI--TACTSFKRL 821
Query: 65 DYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKAS 124
D + +Q+ P +F++N + +G+ +PI+SL ++++MLR ++P TY L KAS
Sbjct: 822 DLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKAS 881
Query: 125 ARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSW- 183
+ G S+ AHI K G + IQ +LI Y++ G I A KVFD + E++ ++W
Sbjct: 882 S--FASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWT 939
Query: 184 ------------------------------NSMLDGYAKCGEMVLAHKVFESMSERDVRS 213
N +++GY G + A +F M +D+ S
Sbjct: 940 TMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIIS 999
Query: 214 WSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIV 273
W+++I GY + YREA+AVF KM G +EVTM +V+ ACAHLG LE GK +H Y +
Sbjct: 1000 WTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTL 1059
Query: 274 DNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEES 333
NG L + + ++LVDMY+KCG++E ALLVF + K+ ++ WN++I GLA HG +E+
Sbjct: 1060 QNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKK--NLFCWNSIIEGLAAHGFAQEA 1117
Query: 334 LGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESL-DKCGMTPSSEHYACMVD 392
L +F M+ +K + VT+ H GLV E + S+ D + + EHY MV
Sbjct: 1118 LKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVH 1177
Query: 393 VLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGR 452
+ ++AG + A + I M EP A + GALL GC H+N +AEI KL+ LEP + G
Sbjct: 1178 LFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGY 1237
Query: 453 YIGLSNVYAGVKRWDDARGMREAMERRGVKK-SPGFSSVEICGVSRRFIAHDKTHSDSEE 511
Y L ++YA RW D +R M G++K PG SS+ I F A DK+HS S+E
Sbjct: 1238 YFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDE 1297
Query: 512 TYSMLNFVAYQMKLG 526
+L+ + QM L
Sbjct: 1298 VCLLLDEIYDQMGLA 1312
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 325 bits (833), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 177/514 (34%), Positives = 300/514 (58%), Gaps = 10/514 (1%)
Query: 15 QTLLSLLDGCKSMLELKQLHAILITSGLSQDEPF-ISKVLCFSALSNSGDIDYSYRAFSQ 73
+ L L+D +S+ E+ Q+HA ++ L + + + A ++ G I +S F Q
Sbjct: 30 EKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQ 89
Query: 74 LSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETG 133
P +F++ I S + Q+ +++++L + P+ T+ L K+ + ++G
Sbjct: 90 TIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS----TKSG 145
Query: 134 VSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKC 193
+H H++K G D ++ L+ +YA G++V A KVFD + E++LVS +M+ YAK
Sbjct: 146 KLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQ 205
Query: 194 GEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVG-PKANEVTMVSV 252
G + A +F+SM ERD+ SW+ +IDGY + G +A+ +F+K+ A G PK +E+T+V+
Sbjct: 206 GNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAA 265
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT 312
L AC+ +GALE G+ +H ++ + + L + + T L+DMY+KCG++EEA+LVF+ ++
Sbjct: 266 LSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRK-- 323
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDMQAV-GIKADEVTYXXXXXXXXHGGLVKEAWHF 371
D++ WNAMI G A HG +++L LF +MQ + G++ ++T+ H GLV E
Sbjct: 324 DIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRI 383
Query: 372 FESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHR 430
FES+ + G+ P EHY C+V +L RAGQL AY+ I M M+ + + ++L C H
Sbjct: 384 FESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHG 443
Query: 431 NFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSV 490
+F L + + LI L + G Y+ LSN+YA V ++ +R M+ +G+ K PG S++
Sbjct: 444 DFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTI 503
Query: 491 EICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
EI F A D+ HS S+E Y+ML ++ ++K
Sbjct: 504 EIENKVHEFRAGDREHSKSKEIYTMLRKISERIK 537
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 325 bits (832), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 184/520 (35%), Positives = 294/520 (56%), Gaps = 10/520 (1%)
Query: 11 ANLNQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRA 70
+ LN + SL ++ LKQ H +I +GL++D ++K + A SN+G + Y+Y
Sbjct: 12 SGLNWFVTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFI--EACSNAGHLRYAYSV 69
Query: 71 FSQLSSPRIFIWNTIIRGYSNSKNPIQ---SLSIFLKMLRHGLAPDYLTYPFLAKASARL 127
F+ P ++ NT+IR S P +++++ K+ PD T+PF+ K + R+
Sbjct: 70 FTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRV 129
Query: 128 LNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSML 187
+ G +H ++ G + + LI MY SCG + A K+FD + K++ WN++L
Sbjct: 130 SDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALL 189
Query: 188 DGYAKCGEMVLAHKVFESMS--ERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKAN 245
GY K GEM A + E M R+ SW+ +I GY K+G EA+ VF++M + +
Sbjct: 190 AGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPD 249
Query: 246 EVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFH 305
EVT+++VL ACA LG+LE G+ + Y+ G+ + L +++DMYAK G I +AL VF
Sbjct: 250 EVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFE 309
Query: 306 GVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLV 365
V++R +V+ W +I GLATHG E+L +F M G++ ++VT+ H G V
Sbjct: 310 CVNER--NVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWV 367
Query: 366 KEAWHFFESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLS 424
F S+ K G+ P+ EHY CM+D+L RAG+L A + I MP + A++ G+LL+
Sbjct: 368 DLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLA 427
Query: 425 GCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKS 484
H + EL E +LI+LEP++ G Y+ L+N+Y+ + RWD++R MR M+ GVKK
Sbjct: 428 ASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKM 487
Query: 485 PGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
G SS+E+ +FI+ D TH E + +L + Q++
Sbjct: 488 AGESSIEVENRVYKFISGDLTHPQVERIHEILQEMDLQIQ 527
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 320 bits (819), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 171/515 (33%), Positives = 289/515 (56%), Gaps = 40/515 (7%)
Query: 14 NQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQ 73
N+ L CK++ LKQ+HA ++ +GL + + +++ ++LS G + Y+++ F +
Sbjct: 12 NRRRPKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDE 71
Query: 74 LSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETG 133
+ P + I N ++RG + S P +++S++ +M + G++PD T+ F+ KA ++L + G
Sbjct: 72 IPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNG 131
Query: 134 VSVHAHIIKTGHEYDRFIQNSLIHMYASCGN----------------IVW---------- 167
+ H +++ G + +++N+LI +A+CG+ + W
Sbjct: 132 FAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKR 191
Query: 168 -----AHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYV 222
A ++FD + K+ V+WN M+ G KC EM A ++F+ +E+DV +W+++I GYV
Sbjct: 192 GKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYV 251
Query: 223 KAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYI-----VDNGL 277
G +EA+ +F++MR G + VT++S+L ACA LG LE GK +H YI V + +
Sbjct: 252 NCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSI 311
Query: 278 PLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLF 337
+ + +L+DMYAKCG+I+ A+ VF GV R D+ WN +I GLA H + E S+ +F
Sbjct: 312 YVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDR--DLSTWNTLIVGLALHHA-EGSIEMF 368
Query: 338 KDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESL-DKCGMTPSSEHYACMVDVLAR 396
++MQ + + +EVT+ H G V E +F + D + P+ +HY CMVD+L R
Sbjct: 369 EEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGR 428
Query: 397 AGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGL 456
AGQL A+ F+ M +EP A + LL C + N EL + KL+ + D G Y+ L
Sbjct: 429 AGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLL 488
Query: 457 SNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVE 491
SN+YA +WD + +R+ + VKK G S +E
Sbjct: 489 SNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 320 bits (819), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 187/566 (33%), Positives = 287/566 (50%), Gaps = 71/566 (12%)
Query: 18 LSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSP 77
L L C ++ ++KQLHA +I L +D K++ SALS + + R F+Q+ P
Sbjct: 23 LQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLI--SALSLCRQTNLAVRVFNQVQEP 80
Query: 78 RIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVH 137
+ + N++IR ++ + P Q+ +F +M R GL D TYPFL KA + +H
Sbjct: 81 NVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMH 140
Query: 138 AHIIKTGHEYDRFIQNSLIHMYASCG------------------NIVW------------ 167
HI K G D ++ N+LI Y+ CG + W
Sbjct: 141 NHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGE 200
Query: 168 ---AHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKA 224
A ++FD + +++L+SWN+MLDGYA+C EM A ++FE M ER+ SWS+++ GY KA
Sbjct: 201 LRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKA 260
Query: 225 GEYREAMAVFEKMR---------------------------------AVGPKANEVTMVS 251
G+ A +F+KM A G K + ++S
Sbjct: 261 GDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVIS 320
Query: 252 VLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRK 311
+L AC G L G +H + + L + +L+DMYAKCG +++A VF+ + K+
Sbjct: 321 ILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK- 379
Query: 312 TDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHF 371
D++ WN M+ GL HG +E++ LF M+ GI+ D+VT+ H GL+ E +
Sbjct: 380 -DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDY 438
Query: 372 FESLDKC-GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHR 430
F S++K + P EHY C+VD+L R G+L A + + MPMEP + GALL C H
Sbjct: 439 FYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHN 498
Query: 431 NFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSV 490
++A+ V L++L+P G Y LSN+YA + W+ +R M+ GV+K G SSV
Sbjct: 499 EVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSV 558
Query: 491 EICGVSRRFIAHDKTHSDSEETYSML 516
E+ F DK+H S++ Y ML
Sbjct: 559 ELEDGIHEFTVFDKSHPKSDQIYQML 584
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 109/237 (45%), Gaps = 16/237 (6%)
Query: 16 TLLSLLDGCKS--MLEL-KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
++S+L C +L L ++H+IL S L + ++ +L A G++ ++ F+
Sbjct: 317 AVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYA--KCGNLKKAFDVFN 374
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
+ + WNT++ G + +++ +F +M R G+ PD +T+ + + +
Sbjct: 375 DIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDE 434
Query: 133 GVSVHAHIIKTGHEYDRFIQ----NSLIHMYASCGNIVWAHKVFDSV-QEKNLVSWNSML 187
G+ + K YD Q L+ + G + A KV ++ E N+V W ++L
Sbjct: 435 GIDYFYSMEKV---YDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALL 491
Query: 188 DGYAKCGEMVLAHKVFESMSER---DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVG 241
E+ +A +V +++ + D ++S L + Y A ++ + KM+++G
Sbjct: 492 GACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMG 548
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 318 bits (814), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 176/521 (33%), Positives = 283/521 (54%), Gaps = 20/521 (3%)
Query: 16 TLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSAL----SNSGDIDYSYRAF 71
++LS G M + Q+H+++ S PF+S V SAL S G+++ + R F
Sbjct: 157 SVLSACSGLNDMNKGVQVHSLIAKS------PFLSDVYIGSALVDMYSKCGNVNDAQRVF 210
Query: 72 SQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQE 131
++ + WN++I + + +++L +F ML + PD +T + A A L +
Sbjct: 211 DEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIK 270
Query: 132 TGVSVHAHIIKTGH-EYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGY 190
G VH ++K D + N+ + MYA C I A +FDS+ +N+++ SM+ GY
Sbjct: 271 VGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGY 330
Query: 191 AKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMV 250
A A +F M+ER+V SW++LI GY + GE EA+++F ++ +
Sbjct: 331 AMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFA 390
Query: 251 SVLCACAHLGALEKGKMMHKYIVDNGLPLT------LVLQTSLVDMYAKCGAIEEALLVF 304
++L ACA L L G H +++ +G + + SL+DMY KCG +EE LVF
Sbjct: 391 NILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVF 450
Query: 305 HGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGL 364
+ +R D + WNAMI G A +G E+L LF++M G K D +T H G
Sbjct: 451 RKMMER--DCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGF 508
Query: 365 VKEAWHFFESLDK-CGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALL 423
V+E H+F S+ + G+ P +HY CMVD+L RAG L A I +MPM+P + + G+LL
Sbjct: 509 VEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLL 568
Query: 424 SGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKK 483
+ C HRN L + V KL+E+EP + G Y+ LSN+YA + +W+D +R++M + GV K
Sbjct: 569 AACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTK 628
Query: 484 SPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
PG S ++I G F+ DK+H ++ +S+L+ + +M+
Sbjct: 629 QPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 123/216 (56%), Gaps = 2/216 (0%)
Query: 136 VHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGE 195
VHA +IK+G + FIQN LI Y+ CG++ +VFD + ++N+ +WNS++ G K G
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 196 MVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCA 255
+ A +F SM ERD +W+S++ G+ + EA+ F M G NE + SVL A
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 256 CAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVL 315
C+ L + KG +H I + + + ++LVDMY+KCG + +A VF + R +V+
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDR--NVV 219
Query: 316 IWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVT 351
WN++I +G E+L +F+ M ++ DEVT
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVT 255
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 185/422 (43%), Gaps = 75/422 (17%)
Query: 20 LLDGC-KSMLE---LKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLS 75
LLD C KS L ++ +HA +I SG S +E FI L A S G ++ + F ++
Sbjct: 25 LLDSCIKSKLSAIYVRYVHASVIKSGFS-NEIFIQNRL-IDAYSKCGSLEDGRQVFDKMP 82
Query: 76 SPRIFIWNTI-------------------------------IRGYSNSKNPIQSLSIFLK 104
I+ WN++ + G++ ++L F
Sbjct: 83 QRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAM 142
Query: 105 MLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGN 164
M + G + ++ + A + L + GV VH+ I K+ D +I ++L+ MY+ CGN
Sbjct: 143 MHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGN 202
Query: 165 IVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKA 224
+ A +VFD + ++N+VSWNS++ + + G V A VF+ M E V
Sbjct: 203 VNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRV------------- 249
Query: 225 GEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNG-LPLTLVL 283
+ +EVT+ SV+ ACA L A++ G+ +H +V N L ++L
Sbjct: 250 ------------------EPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIIL 291
Query: 284 QTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAV 343
+ VDMYAKC I+EA +F + R +V+ +MI G A S + + +F M
Sbjct: 292 SNAFVDMYAKCSRIKEARFIFDSMPIR--NVIAETSMISGYAMAASTKAARLMFTKMAER 349
Query: 344 GIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATA 403
+ V++ G +EA F L + + P+ +A ++ A +L
Sbjct: 350 NV----VSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLG 405
Query: 404 YQ 405
Q
Sbjct: 406 MQ 407
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 315 bits (807), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 180/580 (31%), Positives = 296/580 (51%), Gaps = 76/580 (13%)
Query: 19 SLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPR 78
SL+D +LKQ+HA L+ GL I+K++ A S+ GDI ++ + F L P+
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLI--HASSSFGDITFARQVFDDLPRPQ 83
Query: 79 IFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHA 138
IF WN IIRGYS + + +L ++ M ++PD T+P L KA + L + + G VHA
Sbjct: 84 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 143
Query: 139 HIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDS--VQEKNLVSWNSMLDGYAKCGEM 196
+ + G + D F+QN LI +YA C + A VF+ + E+ +VSW +++ YA+ GE
Sbjct: 144 QVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEP 203
Query: 197 VLAHKVFESMSERDVR-SWSSLID------------------------------------ 219
+ A ++F M + DV+ W +L+
Sbjct: 204 MEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISL 263
Query: 220 --GYVKAGEYREAMAVFEKMRAVG-------------------------------PKANE 246
Y K G+ A +F+KM++ + +
Sbjct: 264 NTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDT 323
Query: 247 VTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHG 306
+++ S + ACA +G+LE+ + M++Y+ + + + ++L+DM+AKCG++E A LVF
Sbjct: 324 ISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDR 383
Query: 307 VSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVK 366
R DV++W+AMI G HG E++ L++ M+ G+ ++VT+ H G+V+
Sbjct: 384 TLDR--DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVR 441
Query: 367 EAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGC 426
E W FF + + P +HYAC++D+L RAG L AY+ I MP++P ++ GALLS C
Sbjct: 442 EGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSAC 501
Query: 427 INHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPG 486
HR+ EL E ++L ++P + G Y+ LSN+YA + WD +R M+ +G+ K G
Sbjct: 502 KKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVG 561
Query: 487 FSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMKLG 526
S VE+ G F DK+H EE + ++ ++K G
Sbjct: 562 CSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEG 601
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 312 bits (800), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 165/503 (32%), Positives = 282/503 (56%), Gaps = 9/503 (1%)
Query: 15 QTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQL 74
+TL+S+L CK++ + +HA +I + QD + +++ S +DY+Y FS +
Sbjct: 30 KTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELI--RVCSTLDSVDYAYDVFSYV 87
Query: 75 SSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGV 134
S+P ++++ +I G+ +S +S++ +M+ + + PD + KA + +E
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCRE--- 144
Query: 135 SVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCG 194
+HA ++K G R + ++ +Y G +V A K+FD + +++ V+ M++ Y++CG
Sbjct: 145 -IHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECG 203
Query: 195 EMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLC 254
+ A ++F+ + +D W+++IDG V+ E +A+ +F +M+ ANE T V VL
Sbjct: 204 FIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLS 263
Query: 255 ACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDV 314
AC+ LGALE G+ +H ++ + + L+ + +L++MY++CG I EA VF + R DV
Sbjct: 264 ACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVM--RDKDV 321
Query: 315 LIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFES 374
+ +N MI GLA HG+ E++ F+DM G + ++VT HGGL+ F S
Sbjct: 322 ISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNS 381
Query: 375 LDKC-GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFE 433
+ + + P EHY C+VD+L R G+L AY+FI +P+EP MLG LLS C H N E
Sbjct: 382 MKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNME 441
Query: 434 LAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEIC 493
L E + ++L E E G Y+ LSN+YA +W ++ +RE+M G++K PG S++E+
Sbjct: 442 LGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVD 501
Query: 494 GVSRRFIAHDKTHSDSEETYSML 516
F+ D H E Y L
Sbjct: 502 NQIHEFLVGDIAHPHKEAIYQRL 524
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 311 bits (797), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 173/501 (34%), Positives = 283/501 (56%), Gaps = 14/501 (2%)
Query: 30 LKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGY 89
+KQLHA + +G+ + + + ++L L Y+ + F + F++N +I+ Y
Sbjct: 4 IKQLHAHCLRTGVDETKDLLQRLLLIPNLV------YARKLFDHHQNSCTFLYNKLIQAY 57
Query: 90 SNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDR 149
P +S+ ++ + GL P + T+ F+ ASA + +H+ ++G E D
Sbjct: 58 YVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDS 117
Query: 150 FIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSER 209
F +LI YA G + A +VFD + ++++ WN+M+ GY + G+M A ++F+SM +
Sbjct: 118 FCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRK 177
Query: 210 DVRSWSSLIDGYVKAGEYREAMAVF---EKMRAVGPKANEVTMVSVLCACAHLGALEKGK 266
+V SW+++I G+ + G Y EA+ +F EK ++V P N +T+VSVL ACA+LG LE G+
Sbjct: 178 NVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKP--NHITVVSVLPACANLGELEIGR 235
Query: 267 MMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLAT 326
+ Y +NG + + + ++MY+KCG I+ A +F + ++ ++ WN+MIG LAT
Sbjct: 236 RLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQR-NLCSWNSMIGSLAT 294
Query: 327 HGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKC-GMTPSSE 385
HG +E+L LF M G K D VT+ HGG+V + F+S+++ ++P E
Sbjct: 295 HGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLE 354
Query: 386 HYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIEL 445
HY CM+D+L R G+L AY I MPM+P A + G LL C H N E+AEI L +L
Sbjct: 355 HYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKL 414
Query: 446 EPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVS-RRFIAHDK 504
EP + G + +SN+YA ++WD MR+ M++ + K+ G+S GV +F DK
Sbjct: 415 EPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDK 474
Query: 505 THSDSEETYSMLNFVAYQMKL 525
+H S E Y +L + +MKL
Sbjct: 475 SHPRSYEIYQVLEEIFRRMKL 495
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 310 bits (795), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 195/588 (33%), Positives = 300/588 (51%), Gaps = 85/588 (14%)
Query: 17 LLSLLDGCKSMLELKQLHAILITSGL--SQDEPFISKVL--CFSALSNSGDIDYSYRAFS 72
L +LLD L LKQ+H +L+TS + ++ + F+S++L C +A + Y+ R
Sbjct: 4 LKTLLDLPLHFLHLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQ---FRYARRLLC 60
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSI--FLKMLRHGLAPDYLTYPFLAKASARLLNQ 130
QL + I +W+++I +S + LS + M R+G+ P T+P L KA +L +
Sbjct: 61 QLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDS 120
Query: 131 ETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGY 190
HAHI+K G + D F++NSLI Y+S G +A ++FD ++K++V+W +M+DG+
Sbjct: 121 NP-FQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGF 179
Query: 191 AKCGEMVLAHKVFESMSER----------------------------------------D 210
+ G A F M + D
Sbjct: 180 VRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCD 239
Query: 211 VRSWSSLIDGYVKAGEYREA-------------------------------MAVFEKMRA 239
V SSL+D Y K Y +A M VFE+M
Sbjct: 240 VFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLK 299
Query: 240 VGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEE 299
NE T+ SVL ACAH+GAL +G+ +H Y++ N + + T+L+D+Y KCG +EE
Sbjct: 300 SDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEE 359
Query: 300 ALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXX 359
A+LVF + ++ +V W AMI G A HG ++ LF M + + +EVT+
Sbjct: 360 AILVFERLHEK--NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSAC 417
Query: 360 XHGGLVKEAWHFFESLD-KCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASM 418
HGGLV+E F S+ + M P ++HYACMVD+ R G L A I +MPMEPT +
Sbjct: 418 AHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVV 477
Query: 419 LGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMER 478
GAL C+ H+++EL + ++I+L+P H GRY L+N+Y+ + WD+ +R+ M+
Sbjct: 478 WGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKD 537
Query: 479 RGVKKSPGFSSVEICGVSRRFIA-HDKTHSDSEETYSMLNFVAYQMKL 525
+ V KSPGFS +E+ G FIA DK +S++ Y L+ V QM+L
Sbjct: 538 QQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMRL 585
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 308 bits (790), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 174/521 (33%), Positives = 286/521 (54%), Gaps = 37/521 (7%)
Query: 9 KIANLN-QTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALS-NSGDIDY 66
KI +N Q + L+ C S+ EL Q+ A I S + +D F++K++ F S + Y
Sbjct: 23 KIDTVNTQNPILLISKCNSLRELMQIQAYAIKSHI-EDVSFVAKLINFCTESPTESSMSY 81
Query: 67 SYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASAR 126
+ F +S P I I+N++ RGYS NP++ S+F+++L G+ PD T+P L KA A
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 127 LLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSM 186
E G +H +K G + + ++ +LI+MY C ++ A VFD + E +V +N+M
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 187 LDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANE 246
+ GYA + EA+++F +M+ K NE
Sbjct: 202 ITGYA-------------------------------RRNRPNEALSLFREMQGKYLKPNE 230
Query: 247 VTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHG 306
+T++SVL +CA LG+L+ GK +HKY + + + T+L+DM+AKCG++++A+ +F
Sbjct: 231 ITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEK 290
Query: 307 VSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVK 366
+ R D W+AMI A HG E+S+ +F+ M++ ++ DE+T+ H G V+
Sbjct: 291 M--RYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVE 348
Query: 367 EAWHFFESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSG 425
E +F + K G+ PS +HY MVD+L+RAG L AY+FI ++P+ PT + LL+
Sbjct: 349 EGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAA 408
Query: 426 CINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSP 485
C +H N +LAE V ++ EL+ H G Y+ LSN+YA K+W+ +R+ M+ R K P
Sbjct: 409 CSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVP 468
Query: 486 GFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMKLG 526
G SS+E+ V F + D S + + + L+ + ++KL
Sbjct: 469 GCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLS 509
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 308 bits (790), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 184/524 (35%), Positives = 290/524 (55%), Gaps = 12/524 (2%)
Query: 9 KIANLNQTLLSLLDGCKSMLELKQLHAILITSG-LSQDEPFISKVLCFSALSNSGDIDYS 67
+++ QT L L+ + E+KQ+H +I SG LS + ++ F G+ +
Sbjct: 128 RVSPDRQTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYM--ELGNFGVA 185
Query: 68 YRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARL 127
+ F+++ P + +N +I GY+ +++L ++ KM+ G+ PD T L L
Sbjct: 186 EKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHL 245
Query: 128 LNQETGVSVHAHIIKTGHEY--DRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNS 185
+ G VH I + G Y + + N+L+ MY C A + FD++++K++ SWN+
Sbjct: 246 SDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNT 305
Query: 186 MLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAG-EYREAMAVFEKMRAVGP-K 243
M+ G+ + G+M A VF+ M +RD+ SW+SL+ GY K G + R +F +M V K
Sbjct: 306 MVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVK 365
Query: 244 ANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLV 303
+ VTMVS++ A+ G L G+ +H ++ L L ++L+DMY KCG IE A +V
Sbjct: 366 PDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMV 425
Query: 304 FHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGG 363
F +++ DV +W +MI GLA HG+ +++L LF MQ G+ + VT H G
Sbjct: 426 FKTATEK--DVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSG 483
Query: 364 LVKEAWHFFESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQ-MPMEPTASMLGA 421
LV+E H F + DK G P +EHY +VD+L RAG++ A + + MPM P+ SM G+
Sbjct: 484 LVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGS 543
Query: 422 LLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGV 481
+LS C + E AE+ +L++LEP+ +G Y+ LSN+YA V RW + REAME RGV
Sbjct: 544 ILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGV 603
Query: 482 KKSPGFSSVEICGVSRRFIAHDK-THSDSEETYSMLNFVAYQMK 524
KK+ G+SSV RF+A +K H E +L + +MK
Sbjct: 604 KKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMK 647
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 164/334 (49%), Gaps = 44/334 (13%)
Query: 12 NLNQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAF 71
LN L LL+ C S + KQ+ A ++ L D +S+++ FSA++ ++D + F
Sbjct: 32 QLNHQSLVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLF 91
Query: 72 SQLS-SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQ 130
+ +P +F++NT+I S+SKN + ++ M+RH ++PD T+ +L KAS+ L
Sbjct: 92 LNFTPNPNVFVYNTMISAVSSSKN--ECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEV 149
Query: 131 ETGVSVHAHIIKTG-HEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDG 189
+ +H HII +G ++ NSL+ Y GN A KVF + ++ S+N M+ G
Sbjct: 150 K---QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVG 206
Query: 190 YAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTM 249
YAK G + EA+ ++ KM + G + +E T+
Sbjct: 207 YAKQGFSL-------------------------------EALKLYFKMVSDGIEPDEYTV 235
Query: 250 VSVLCACAHLGALEKGKMMHKYIVDNGLPL---TLVLQTSLVDMYAKCGAIEEALLVFHG 306
+S+L C HL + GK +H +I G P+ L+L +L+DMY KC A F
Sbjct: 236 LSLLVCCGHLSDIRLGKGVHGWIERRG-PVYSSNLILSNALLDMYFKCKESGLAKRAFDA 294
Query: 307 VSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDM 340
+ K+ D+ WN M+ G G +E + +F M
Sbjct: 295 MKKK--DMRSWNTMVVGFVRLGDMEAAQAVFDQM 326
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 181/516 (35%), Positives = 273/516 (52%), Gaps = 39/516 (7%)
Query: 15 QTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSG---DIDYSYRAF 71
Q L LL C ++ E KQ+HA I L F + + + ++SG ++Y+ F
Sbjct: 31 QECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSV-LAKCAHSGWENSMNYAASIF 89
Query: 72 SQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQE 131
+ P F +NT+IRGY N + ++L + +M++ G PD TYP L KA RL +
Sbjct: 90 RGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIR 149
Query: 132 TGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYA 191
G +H + K G E D F+QNSLI+M Y
Sbjct: 150 EGKQIHGQVFKLGLEADVFVQNSLINM-------------------------------YG 178
Query: 192 KCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKM-RAVGPKANEVTMV 250
+CGEM L+ VFE + + SWSS++ G + E + +F M KA E MV
Sbjct: 179 RCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMV 238
Query: 251 SVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR 310
S L ACA+ GAL G +H +++ N L +++QTSLVDMY KCG +++AL +F + KR
Sbjct: 239 SALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKR 298
Query: 311 KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWH 370
L ++AMI GLA HG E +L +F M G++ D V Y H GLVKE
Sbjct: 299 NN--LTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRR 356
Query: 371 FFESLDKCG-MTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINH 429
F + K G + P++EHY C+VD+L RAG L A + I +P+E + LS C
Sbjct: 357 VFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVR 416
Query: 430 RNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSS 489
+N EL +I ++L++L + G Y+ +SN+Y+ + WDD R + +G+K++PGFS
Sbjct: 417 QNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSI 476
Query: 490 VEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMKL 525
VE+ G + RF++ D++H +E Y ML+ + +Q+K
Sbjct: 477 VELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKF 512
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 305 bits (781), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 173/525 (32%), Positives = 294/525 (56%), Gaps = 16/525 (3%)
Query: 5 SPSFKIAN--LNQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSG 62
+PS +A LNQ + +++ + + LKQ+ + +I SGLS K+L F L
Sbjct: 13 APSSHMAEQLLNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTL-RLC 71
Query: 63 DIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIF----LKMLRHGLAPDYLTYP 118
++ Y+ F + S P ++ ++ YS+S P+ + S F L + R P++ YP
Sbjct: 72 NLSYARFIFDRFSFPNTHLYAAVLTAYSSSL-PLHASSAFSFFRLMVNRSVPRPNHFIYP 130
Query: 119 FLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYAS-CGNIVWAHKVFDSVQE 177
+ K++ L + + VH H+ K+G +Q +L+H YAS +I A ++FD + E
Sbjct: 131 LVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSE 190
Query: 178 KNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKM 237
+N+VSW +ML GYA+ G++ A +FE M ERDV SW++++ + G + EA+++F +M
Sbjct: 191 RNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRM 250
Query: 238 -RAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGA 296
+ NEVT+V VL ACA G L+ K +H + L + + SLVD+Y KCG
Sbjct: 251 INEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGN 310
Query: 297 IEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGI---KADEVTYX 353
+EEA VF SK+ + WN+MI A HG EE++ +F++M + I K D +T+
Sbjct: 311 LEEASSVFKMASKK--SLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFI 368
Query: 354 XXXXXXXHGGLVKEAWHFFESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPM 412
HGGLV + +F+ + ++ G+ P EHY C++D+L RAG+ A + + M M
Sbjct: 369 GLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKM 428
Query: 413 EPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGM 472
+ ++ G+LL+ C H + +LAE+ + L+ L P++ G ++N+Y + W++AR
Sbjct: 429 KADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRA 488
Query: 473 REAMERRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLN 517
R+ ++ + K PG+S +EI +F + DK+H ++EE Y +L+
Sbjct: 489 RKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILD 533
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 305 bits (781), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 187/546 (34%), Positives = 288/546 (52%), Gaps = 62/546 (11%)
Query: 2 PGVSPSFKIA-NLNQTLLSLLDGCKSMLELKQLHAILITSGLSQDEP----FISKVLCFS 56
P SPS A N +Q + SL + C M +LKQLHA + + + EP K+L S
Sbjct: 35 PASSPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPE-EPATLFLYGKILQLS 93
Query: 57 ALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNS-KNPIQSLSIFLKMLRHG-LAPDY 114
S+ D++Y++R F + + F+WNT+IR ++ ++ ++ KML G +PD
Sbjct: 94 --SSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDK 151
Query: 115 LTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDS 174
T+PF+ KA A + G VH I+K G D ++ N LIH+Y SCG + A KVFD
Sbjct: 152 HTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDE 211
Query: 175 VQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVF 234
+ E++LVSWNSM+D V+ GEY A+ +F
Sbjct: 212 MPERSLVSWNSMID-------------------------------ALVRFGEYDSALQLF 240
Query: 235 EKM-RAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIV---DNGLPLTLVLQTSLVDM 290
+M R+ P TM SVL ACA LG+L G H +++ D + + ++++ SL++M
Sbjct: 241 REMQRSFEPDG--YTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEM 298
Query: 291 YAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDM--QAVGIKAD 348
Y KCG++ A VF G+ KR D+ WNAMI G ATHG EE++ F M + ++ +
Sbjct: 299 YCKCGSLRMAEQVFQGMQKR--DLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPN 356
Query: 349 EVTYXXXXXXXXHGGLVKEAWHFFESL--DKCGMTPSSEHYACMVDVLARAGQLATAYQF 406
VT+ H G V + +F+ + D C + P+ EHY C+VD++ARAG + A
Sbjct: 357 SVTFVGLLIACNHRGFVNKGRQYFDMMVRDYC-IEPALEHYGCIVDLIARAGYITEAIDM 415
Query: 407 ICQMPMEPTASMLGALLSGCINH-RNFELAEIVGRKLIELEPDHD-------GRYIGLSN 458
+ MPM+P A + +LL C + EL+E + R +I + D++ G Y+ LS
Sbjct: 416 VMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSR 475
Query: 459 VYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNF 518
VYA RW+D +R+ M G++K PG SS+EI G+S F A D +H +++ Y L
Sbjct: 476 VYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKV 535
Query: 519 VAYQMK 524
+ +++
Sbjct: 536 IDDRLR 541
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 303 bits (777), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 165/511 (32%), Positives = 271/511 (53%), Gaps = 5/511 (0%)
Query: 17 LLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSS 76
+L + ++ E +LH + D PF+ ++ G I+Y+ F ++S
Sbjct: 117 ILKAVSKVSALFEGMELHGVAFKIATLCD-PFVETGF-MDMYASCGRINYARNVFDEMSH 174
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
+ WNT+I Y ++ +F +M + PD + + A R N ++
Sbjct: 175 RDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAI 234
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEM 196
+ +I+ D + +L+ MYA G + A + F + +NL +M+ GY+KCG +
Sbjct: 235 YEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRL 294
Query: 197 VLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCAC 256
A +F+ ++D+ W+++I YV++ +EA+ VFE+M G K + V+M SV+ AC
Sbjct: 295 DDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISAC 354
Query: 257 AHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLI 316
A+LG L+K K +H I NGL L + +L++MYAKCG ++ VF + +R +V+
Sbjct: 355 ANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR--NVVS 412
Query: 317 WNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESL- 375
W++MI L+ HG ++L LF M+ ++ +EVT+ H GLV+E F S+
Sbjct: 413 WSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMT 472
Query: 376 DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELA 435
D+ +TP EHY CMVD+ RA L A + I MP+ + G+L+S C H EL
Sbjct: 473 DEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELG 532
Query: 436 EIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGV 495
+ ++++ELEPDHDG + +SN+YA +RW+D R +R ME + V K G S ++ G
Sbjct: 533 KFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGK 592
Query: 496 SRRFIAHDKTHSDSEETYSMLNFVAYQMKLG 526
S F+ DK H S E Y+ L+ V ++KL
Sbjct: 593 SHEFLIGDKRHKQSNEIYAKLDEVVSKLKLA 623
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 199/418 (47%), Gaps = 20/418 (4%)
Query: 15 QTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQL 74
T+L L CKS+ +KQLHA ++ + ++ S + S S+S ++ Y+ FS +
Sbjct: 13 NTILEKLSFCKSLNHIKQLHAHILRTVINH--KLNSFLFNLSVSSSSINLSYALNVFSSI 70
Query: 75 SSP-RIFIWNTIIRGYSNSKNPIQSLSIFLKMLRH-GLAPDYLTYPFLAKASARLLNQET 132
SP ++N +R S S P ++ +F + +RH G D ++ + KA +++
Sbjct: 71 PSPPESIVFNPFLRDLSRSSEPRATI-LFYQRIRHVGGRLDQFSFLPILKAVSKVSALFE 129
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G+ +H K D F++ + MYASCG I +A VFD + +++V+WN+M++ Y +
Sbjct: 130 GMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCR 189
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKA----GEYREAMAVFEKMRAVGPKANEVT 248
G + A K+FE M + +V ++ V A G R A++E + + +
Sbjct: 190 FGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHL 249
Query: 249 MVSVLCACAHLGALEKGK-MMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGV 307
+ +++ A G ++ + K V N L + T++V Y+KCG +++A ++F
Sbjct: 250 LTALVTMYAGAGCMDMAREFFRKMSVRN-----LFVSTAMVSGYSKCGRLDDAQVIFDQT 304
Query: 308 SKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKE 367
K+ D++ W MI +E+L +F++M GIK D V+ + G++ +
Sbjct: 305 EKK--DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDK 362
Query: 368 AWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPT---ASMLGAL 422
A + G+ ++++ A+ G L +MP +SM+ AL
Sbjct: 363 AKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINAL 420
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 302 bits (773), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/512 (33%), Positives = 289/512 (56%), Gaps = 9/512 (1%)
Query: 16 TLLSLLDGCKSMLELK---QLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
T++ ++ C + +L+ +++A + SG+ ++ +S ++ N+ ID + R F
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA--IDVAKRLFD 295
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
+ + + + N + Y ++L +F M+ G+ PD ++ + ++L N
Sbjct: 296 EYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILW 355
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G S H ++++ G E I N+LI MY C A ++FD + K +V+WNS++ GY +
Sbjct: 356 GKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVE 415
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAV-GPKANEVTMVS 251
GE+ A + FE+M E+++ SW+++I G V+ + EA+ VF M++ G A+ VTM+S
Sbjct: 416 NGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMS 475
Query: 252 VLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRK 311
+ AC HLGAL+ K ++ YI NG+ L + L T+LVDM+++CG E A+ +F+ ++ R
Sbjct: 476 IASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR- 534
Query: 312 TDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHF 371
DV W A IG +A G+ E ++ LF DM G+K D V + HGGLV++
Sbjct: 535 -DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEI 593
Query: 372 FESLDKC-GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHR 430
F S+ K G++P HY CMVD+L RAG L A Q I MPMEP + +LL+ C
Sbjct: 594 FYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQG 653
Query: 431 NFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSV 490
N E+A K+ L P+ G Y+ LSNVYA RW+D +R +M+ +G++K PG SS+
Sbjct: 654 NVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSI 713
Query: 491 EICGVSRRFIAHDKTHSDSEETYSMLNFVAYQ 522
+I G + F + D++H + +ML+ V+ +
Sbjct: 714 QIRGKTHEFTSGDESHPEMPNIEAMLDEVSQR 745
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 111/336 (33%), Positives = 175/336 (52%), Gaps = 36/336 (10%)
Query: 19 SLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSA-LSNSGDIDYSYRAFSQLSS- 76
S L CK++ ELK H L GL D I+K++ S L + ++ F S
Sbjct: 37 SSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESY 96
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
F++N++IRGY++S +++ +FL+M+ G++PD T+PF A A+ + G+ +
Sbjct: 97 GTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQI 156
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEM 196
H I+K G+ D F+QNSL+H YA CG + A KVFD + E+N+VSW SM+ GYA+
Sbjct: 157 HGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR---- 212
Query: 197 VLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKM-RAVGPKANEVTMVSVLCA 255
RD ++A+ +F +M R N VTMV V+ A
Sbjct: 213 ------------RDFA---------------KDAVDLFFRMVRDEEVTPNSVTMVCVISA 245
Query: 256 CAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVL 315
CA L LE G+ ++ +I ++G+ + ++ ++LVDMY KC AI+ A +F D
Sbjct: 246 CAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLD-- 303
Query: 316 IWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVT 351
+ NAM G E+LG+F M G++ D ++
Sbjct: 304 LCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 302 bits (773), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 174/512 (33%), Positives = 289/512 (56%), Gaps = 9/512 (1%)
Query: 16 TLLSLLDGCKSMLELK---QLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
T++ ++ C + +L+ +++A + SG+ ++ +S ++ N+ ID + R F
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA--IDVAKRLFD 295
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
+ + + + N + Y ++L +F M+ G+ PD ++ + ++L N
Sbjct: 296 EYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILW 355
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G S H ++++ G E I N+LI MY C A ++FD + K +V+WNS++ GY +
Sbjct: 356 GKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVE 415
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAV-GPKANEVTMVS 251
GE+ A + FE+M E+++ SW+++I G V+ + EA+ VF M++ G A+ VTM+S
Sbjct: 416 NGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMS 475
Query: 252 VLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRK 311
+ AC HLGAL+ K ++ YI NG+ L + L T+LVDM+++CG E A+ +F+ ++ R
Sbjct: 476 IASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR- 534
Query: 312 TDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHF 371
DV W A IG +A G+ E ++ LF DM G+K D V + HGGLV++
Sbjct: 535 -DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEI 593
Query: 372 FESLDKC-GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHR 430
F S+ K G++P HY CMVD+L RAG L A Q I MPMEP + +LL+ C
Sbjct: 594 FYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQG 653
Query: 431 NFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSV 490
N E+A K+ L P+ G Y+ LSNVYA RW+D +R +M+ +G++K PG SS+
Sbjct: 654 NVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSI 713
Query: 491 EICGVSRRFIAHDKTHSDSEETYSMLNFVAYQ 522
+I G + F + D++H + +ML+ V+ +
Sbjct: 714 QIRGKTHEFTSGDESHPEMPNIEAMLDEVSQR 745
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 111/336 (33%), Positives = 175/336 (52%), Gaps = 36/336 (10%)
Query: 19 SLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSA-LSNSGDIDYSYRAFSQLSS- 76
S L CK++ ELK H L GL D I+K++ S L + ++ F S
Sbjct: 37 SSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESY 96
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
F++N++IRGY++S +++ +FL+M+ G++PD T+PF A A+ + G+ +
Sbjct: 97 GTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQI 156
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEM 196
H I+K G+ D F+QNSL+H YA CG + A KVFD + E+N+VSW SM+ GYA+
Sbjct: 157 HGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR---- 212
Query: 197 VLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKM-RAVGPKANEVTMVSVLCA 255
RD ++A+ +F +M R N VTMV V+ A
Sbjct: 213 ------------RDFA---------------KDAVDLFFRMVRDEEVTPNSVTMVCVISA 245
Query: 256 CAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVL 315
CA L LE G+ ++ +I ++G+ + ++ ++LVDMY KC AI+ A +F D+
Sbjct: 246 CAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLC 305
Query: 316 IWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVT 351
NAM G E+LG+F M G++ D ++
Sbjct: 306 --NAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 298 bits (764), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 171/515 (33%), Positives = 280/515 (54%), Gaps = 44/515 (8%)
Query: 16 TLLSLLDGCKS--MLEL-KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
T++S+ GC ++ L + +H+I + + S+++ F + +L S GD+D + F
Sbjct: 298 TIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLL--DMYSKCGDLDSAKAVFR 355
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
++S + + ++I GY+ +++ +F +M G++PD T + AR +
Sbjct: 356 EMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDE 415
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G VH I + +D F+ N+L+ MY AK
Sbjct: 416 GKRVHEWIKENDLGFDIFVSNALMDMY-------------------------------AK 444
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKM---RAVGPKANEVTM 249
CG M A VF M +D+ SW+++I GY K EA+++F + + P +E T+
Sbjct: 445 CGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSP--DERTV 502
Query: 250 VSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSK 309
VL ACA L A +KG+ +H YI+ NG + SLVDMYAKCGA+ A ++F ++
Sbjct: 503 ACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS 562
Query: 310 RKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAW 369
+ D++ W MI G HG +E++ LF M+ GI+ADE+++ H GLV E W
Sbjct: 563 K--DLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGW 620
Query: 370 HFFESLD-KCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCIN 428
FF + +C + P+ EHYAC+VD+LAR G L AY+FI MP+ P A++ GALL GC
Sbjct: 621 RFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRI 680
Query: 429 HRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFS 488
H + +LAE V K+ ELEP++ G Y+ ++N+YA ++W+ + +R+ + +RG++K+PG S
Sbjct: 681 HHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 740
Query: 489 SVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQM 523
+EI G F+A D ++ ++E + L V +M
Sbjct: 741 WIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARM 775
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 184/396 (46%), Gaps = 77/396 (19%)
Query: 15 QTLLSLLDGC---KSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAF 71
+TL S+L C KS+ + K++ + +G D SK+ +N GD+ + R F
Sbjct: 95 RTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLM--YTNCGDLKEASRVF 152
Query: 72 SQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQE 131
++ + WN ++ + S + S+ +F KM+ G+ D T+ ++K+ + L +
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 132 TGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYA 191
G +H I+K+G + NSL+ Y + A KVFD + E++++SWNS+++GY
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 192 KCG-----------------EMVLAH--KVFESMSE--------------------RDVR 212
G E+ LA VF ++ R+ R
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 213 SWSSLIDGYVKAGE-------YR------------------------EAMAVFEKMRAVG 241
++L+D Y K G+ +R EA+ +FE+M G
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 242 PKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEAL 301
+ T+ +VL CA L++GK +H++I +N L + + +L+DMYAKCG+++EA
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 302 LVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLF 337
LVF + R D++ WN +IGG + + E+L LF
Sbjct: 453 LVFSEM--RVKDIISWNTIIGGYSKNCYANEALSLF 486
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 22/211 (10%)
Query: 141 IKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAH 200
+K G E D FI+ GN V DS NL S S++ Y CG++ A
Sbjct: 110 LKDGKEVDNFIR----------GNGF----VIDS----NLGSKLSLM--YTNCGDLKEAS 149
Query: 201 KVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLG 260
+VF+ + W+ L++ K+G++ ++ +F+KM + G + + T V + + L
Sbjct: 150 RVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR 209
Query: 261 ALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAM 320
++ G+ +H +I+ +G + SLV Y K ++ A VF +++R DV+ WN++
Sbjct: 210 SVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER--DVISWNSI 267
Query: 321 IGGLATHGSVEESLGLFKDMQAVGIKADEVT 351
I G ++G E+ L +F M GI+ D T
Sbjct: 268 INGYVSNGLAEKGLSVFVQMLVSGIEIDLAT 298
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Query: 248 TMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGV 307
T+ SVL CA +L+ GK + +I NG + L + L MY CG ++EA VF V
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 308 SKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
K L WN ++ LA G S+GLFK M + G++ D T+
Sbjct: 156 KIEKA--LFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 183/541 (33%), Positives = 277/541 (51%), Gaps = 47/541 (8%)
Query: 29 ELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRG 88
E KQ HAI I +G+ D + +L F G I+Y+ F ++ + WN II G
Sbjct: 292 EGKQSHAIAIVNGMELDNILGTSLLNF--YCKVGLIEYAEMVFDRMFEKDVVTWNLIISG 349
Query: 89 YSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYD 148
Y ++ + M L D +T L A+AR N + G V + I+ E D
Sbjct: 350 YVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESD 409
Query: 149 RFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSE 208
+ ++++ MYA CG+IV A KVFDS EK+L+ WN++L YA+ G A ++F M
Sbjct: 410 IVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQL 469
Query: 209 RDVR---------------------------------------SWSSLIDGYVKAGEYRE 229
V SW+++++G V+ G E
Sbjct: 470 EGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEE 529
Query: 230 AMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLV-LQTSLV 288
A+ KM+ G + N ++ L ACAHL +L G+ +H YI+ N +LV ++TSLV
Sbjct: 530 AILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLV 589
Query: 289 DMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKAD 348
DMYAKCG I +A VF SK +++ + NAMI A +G+++E++ L++ ++ VG+K D
Sbjct: 590 DMYAKCGDINKAEKVFG--SKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPD 647
Query: 349 EVTYXXXXXXXXHGGLVKEAWHFFESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFI 407
+T H G + +A F + K M P EHY MVD+LA AG+ A + I
Sbjct: 648 NITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLI 707
Query: 408 CQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWD 467
+MP +P A M+ +L++ C R EL + + RKL+E EP++ G Y+ +SN YA WD
Sbjct: 708 EEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWD 767
Query: 468 DARGMREAMERRGVKKSPGFSSVEICGVS--RRFIAHDKTHSDSEETYSMLNFVAYQMKL 525
+ MRE M+ +G+KK PG S ++I G F+A+DKTH+ E ML + Y M
Sbjct: 768 EVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALLLYDMGT 827
Query: 526 G 526
G
Sbjct: 828 G 828
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 182/399 (45%), Gaps = 38/399 (9%)
Query: 31 KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYS 90
+ +H ++ SGL +D F++ L G +D + + F ++ WN ++ GY
Sbjct: 193 RGVHGYVVKSGL-EDCVFVASSLA-DMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYV 250
Query: 91 NSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRF 150
+ +++ +F M + G+ P +T ASA + E G HA I G E D
Sbjct: 251 QNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNI 310
Query: 151 IQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERD 210
+ SL++ Y G I +A EMV F+ M E+D
Sbjct: 311 LGTSLLNFYCKVGLIEYA--------------------------EMV-----FDRMFEKD 339
Query: 211 VRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHK 270
V +W+ +I GYV+ G +A+ + + MR K + VT+ +++ A A L+ GK +
Sbjct: 340 VVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQC 399
Query: 271 YIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSV 330
Y + + +VL ++++DMYAKCG+I +A VF ++ D+++WN ++ A G
Sbjct: 400 YCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK--DLILWNTLLAAYAESGLS 457
Query: 331 EESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACM 390
E+L LF MQ G+ + +T+ G V EA F + G+ P+ + M
Sbjct: 458 GEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTM 517
Query: 391 VDVLARAGQLATAYQFICQMP---MEPTASMLGALLSGC 426
++ + + G A F+ +M + P A + LS C
Sbjct: 518 MNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 169/337 (50%), Gaps = 40/337 (11%)
Query: 20 LLDGCKSMLEL---KQLHAILITSG--LSQDEPFISKVLCFSALSNSGDIDYSYRAFSQL 74
+L GC +L KQ+HA ++ +G +++E +K++ F A ++ +I + FS+L
Sbjct: 76 ILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEI--AEVLFSKL 133
Query: 75 SSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGV 134
+F W II +L F++ML + + PD P + KA L G
Sbjct: 134 RVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGR 193
Query: 135 SVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCG 194
VH +++K+G E F+ +SL MY CG + A KVFD + ++N V+WN+++ GY
Sbjct: 194 GVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGY---- 249
Query: 195 EMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLC 254
V+ G+ EA+ +F MR G + VT+ + L
Sbjct: 250 ---------------------------VQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLS 282
Query: 255 ACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDV 314
A A++G +E+GK H + NG+ L +L TSL++ Y K G IE A +VF + ++ DV
Sbjct: 283 ASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEK--DV 340
Query: 315 LIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVT 351
+ WN +I G G VE+++ + + M+ +K D VT
Sbjct: 341 VTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVT 377
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 292 bits (748), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 173/543 (31%), Positives = 286/543 (52%), Gaps = 42/543 (7%)
Query: 6 PSFKIANLNQT-LLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDI 64
P+ + A+ +++ +SL+ CK L+ +HA ++ G+ V C S L +
Sbjct: 20 PADRQASPDESHFISLIHACKDTASLRHVHAQILRRGVLSSRVAAQLVSCSSLLKSP--- 76
Query: 65 DYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKAS 124
DYS F F+ N +IRG + + S+ F+ MLR G+ PD LT+PF+ K++
Sbjct: 77 DYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSN 136
Query: 125 ARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFD----------- 173
++L + G ++HA +K + D F++ SL+ MYA G + A +VF+
Sbjct: 137 SKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESI 196
Query: 174 ------------------------SVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSER 209
S+ E+N SW++++ GY GE+ A ++FE M E+
Sbjct: 197 LIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEK 256
Query: 210 DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMH 269
+V SW++LI+G+ + G+Y A++ + +M G K NE T+ +VL AC+ GAL G +H
Sbjct: 257 NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIH 316
Query: 270 KYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGS 329
YI+DNG+ L + T+LVDMYAKCG ++ A VF ++ + D+L W AMI G A HG
Sbjct: 317 GYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK--DILSWTAMIQGWAVHGR 374
Query: 330 VEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLD-KCGMTPSSEHYA 388
+++ F+ M G K DEV + + V +FF+S+ + P+ +HY
Sbjct: 375 FHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYV 434
Query: 389 CMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPD 448
+VD+L RAG+L A++ + MP+ P + AL C H+ + AE V + L+EL+P+
Sbjct: 435 LVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPE 494
Query: 449 HDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAHDKTHSD 508
G YI L +A D R ++++R ++S G+S +E+ G +F A D +H
Sbjct: 495 LCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKL 554
Query: 509 SEE 511
++E
Sbjct: 555 TQE 557
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 291 bits (745), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 166/500 (33%), Positives = 266/500 (53%), Gaps = 40/500 (8%)
Query: 29 ELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRG 88
+LK++HAI++ +G S+ ++++L L GD+ Y+ + F ++ PRIF+WNT+ +G
Sbjct: 26 QLKKIHAIVLRTGFSEKNSLLTQLL--ENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKG 83
Query: 89 YSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYD 148
Y ++ P +SL ++ KM G+ PD TYPF+ KA ++L + G ++HAH++K G
Sbjct: 84 YVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCL 143
Query: 149 RFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSE 208
+ L+ MY K GE+ A +FESM
Sbjct: 144 GIVATELVMMYM-------------------------------KFGELSSAEFLFESMQV 172
Query: 209 RDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMM 268
+D+ +W++ + V+ G A+ F KM A + + T+VS+L AC LG+LE G+ +
Sbjct: 173 KDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEI 232
Query: 269 HKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHG 328
+ + ++++ + +DM+ KCG E A ++F + +R +V+ W+ MI G A +G
Sbjct: 233 YDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQR--NVVSWSTMIVGYAMNG 290
Query: 329 SVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFF----ESLDKCGMTPSS 384
E+L LF MQ G++ + VT+ H GLV E +F +S DK + P
Sbjct: 291 DSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDK-NLEPRK 349
Query: 385 EHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIE 444
EHYACMVD+L R+G L AY+FI +MP+EP + GALL C HR+ L + V L+E
Sbjct: 350 EHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVE 409
Query: 445 LEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAHDK 504
PD ++ LSN+YA +WD +R M + G KK +SSVE G F DK
Sbjct: 410 TAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDK 469
Query: 505 THSDSEETYSMLNFVAYQMK 524
+H S+ Y L+ + +++
Sbjct: 470 SHPQSKAIYEKLDEILKKIR 489
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 291 bits (744), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 168/502 (33%), Positives = 265/502 (52%), Gaps = 36/502 (7%)
Query: 17 LLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALS-NSGDIDYSYRAFSQLS 75
+LS + KS+ E++Q HA ++ +GL D SK++ F+A + + Y++ +++
Sbjct: 42 ILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIG 101
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVS 135
SP F N++IR Y+NS P +L++F +ML + PD ++ F+ KA A E G
Sbjct: 102 SPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQ 161
Query: 136 VHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNS---------- 185
+H IK+G D F++N+L+++Y G A KV D + ++ VSWNS
Sbjct: 162 IHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGL 221
Query: 186 ---------------------MLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKA 224
M+ GYA G + A +VF+SM RDV SW++++ Y
Sbjct: 222 VDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHV 281
Query: 225 GEYREAMAVFEKM-RAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVL 283
G Y E + VF KM K + T+VSVL ACA LG+L +G+ +H YI +G+ + L
Sbjct: 282 GCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFL 341
Query: 284 QTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAV 343
T+LVDMY+KCG I++AL VF SKR DV WN++I L+ HG +++L +F +M
Sbjct: 342 ATALVDMYSKCGKIDKALEVFRATSKR--DVSTWNSIISDLSVHGLGKDALEIFSEMVYE 399
Query: 344 GIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKC-GMTPSSEHYACMVDVLARAGQLAT 402
G K + +T+ H G++ +A FE + + P+ EHY CMVD+L R G++
Sbjct: 400 GFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEE 459
Query: 403 AYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAG 462
A + + ++P + + +L +LL C E AE + +L+EL Y +SN+YA
Sbjct: 460 AEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYAS 519
Query: 463 VKRWDDARGMREAMERRGVKKS 484
RW+ R M V +S
Sbjct: 520 DGRWEKVIDGRRNMRAERVNRS 541
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 178/583 (30%), Positives = 294/583 (50%), Gaps = 77/583 (13%)
Query: 15 QTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQL 74
Q + +L+ ++ LKQ+H LI L D ++ +L + YSY FS
Sbjct: 14 QQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQ--TKYSYLLFSHT 71
Query: 75 SSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGV 134
P IF++N++I G+ N+ ++L +FL + +HGL T+P + KA R +++ G+
Sbjct: 72 QFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGI 131
Query: 135 SVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCG 194
+H+ ++K G +D SL+ +Y+ G + AHK+FD + ++++V+W ++ GY G
Sbjct: 132 DLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSG 191
Query: 195 EMVLAHKVFESMSERDVR----------------------SW-----------------S 215
A +F+ M E V+ W +
Sbjct: 192 RHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRT 251
Query: 216 SLIDGYVKAGEYREAMAVFE-------------------------------KMRAVGPKA 244
+L++ Y K G+ +A +VF+ +M K
Sbjct: 252 TLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKP 311
Query: 245 NEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVF 304
++ ++V L +CA LGAL+ G+ I + L + +L+DMYAKCGA+ VF
Sbjct: 312 DQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVF 371
Query: 305 HGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGL 364
+ ++ D++I NA I GLA +G V+ S +F + +GI D T+ H GL
Sbjct: 372 KEMKEK--DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGL 429
Query: 365 VKEAWHFFESLDKC--GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGAL 422
+++ FF ++ C + + EHY CMVD+ RAG L AY+ IC MPM P A + GAL
Sbjct: 430 IQDGLRFFNAI-SCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGAL 488
Query: 423 LSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVK 482
LSGC ++ +LAE V ++LI LEP + G Y+ LSN+Y+ RWD+A +R+ M ++G+K
Sbjct: 489 LSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMK 548
Query: 483 KSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMKL 525
K PG+S +E+ G F+A DK+H S++ Y+ L + +M+L
Sbjct: 549 KIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRL 591
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 172/526 (32%), Positives = 282/526 (53%), Gaps = 16/526 (3%)
Query: 13 LNQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVL-CFSALSNSGDIDYSYRAF 71
L +L+S LD C ++ ++KQ+H ++ GL Q ++K++ + L D Y+ R
Sbjct: 48 LVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMD-PYARRVI 106
Query: 72 SQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQE 131
+ F+W +IRGY+ ++++++ M + + P T+ L KA + +
Sbjct: 107 EPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLN 166
Query: 132 TGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYA 191
G HA + ++ N++I MY C +I A KVFD + E++++SW ++ YA
Sbjct: 167 LGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYA 226
Query: 192 KCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVS 251
+ G M A ++FES+ +D+ +W++++ G+ + + +EA+ F++M G +A+EVT+
Sbjct: 227 RVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAG 286
Query: 252 VLCACAHLGALEKGKMMHKYIVDNGLPLT--LVLQTSLVDMYAKCGAIEEALLVFHGVSK 309
+ ACA LGA + + +G + +V+ ++L+DMY+KCG +EEA+ VF +S
Sbjct: 287 YISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVF--MSM 344
Query: 310 RKTDVLIWNAMIGGLATHGSVEESLGLFKDM-QAVGIKADEVTYXXXXXXXXHGGLVKEA 368
+V +++MI GLATHG +E+L LF M IK + VT+ H GLV +
Sbjct: 345 NNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQG 404
Query: 369 WHFFESLDKC-GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCI 427
F+S+ + G+ P+ +HY CMVD+L R G+L A + I M +EP + GALL C
Sbjct: 405 RQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACR 464
Query: 428 NHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGF 487
H N E+AEI L ELEPD G YI LSNVYA W +R+ ++ +G+KK+P
Sbjct: 465 IHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAV 524
Query: 488 S-SVEICGVSRRFIAHDKTHSDS-------EETYSMLNFVAYQMKL 525
S V+ G +F + H S EE L + YQ L
Sbjct: 525 SWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDL 570
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 288 bits (738), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 173/490 (35%), Positives = 269/490 (54%), Gaps = 21/490 (4%)
Query: 20 LLDGCKSMLELKQLHAILITSG-----LSQDEPFISKVLCFSALSNSGD-----IDYSYR 69
LL C+++ L Q HA ITSG Q+ F + + +++S S + Y+
Sbjct: 10 LLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATS 69
Query: 70 AFSQLSSPRIFIWNTIIRGYS-NSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLL 128
F +++P F +NTIIR + + + + S F++M R + PD+ T+PF+ KA A
Sbjct: 70 VFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKK 129
Query: 129 NQETGV--SVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSM 186
N + + ++H ++ G D F N+LI +Y+ I A ++FD ++++V++N +
Sbjct: 130 NGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVL 189
Query: 187 LDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANE 246
+DG K E+V A ++F+SM RD+ SW+SLI GY + REA+ +F++M A+G K +
Sbjct: 190 IDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDN 249
Query: 247 VTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHG 306
V +VS L ACA G +KGK +H Y L + L T LVD YAKCG I+ A+ +F
Sbjct: 250 VAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFEL 309
Query: 307 VSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVK 366
S + + WNAMI GLA HG+ E ++ F+ M + GIK D VT+ H GLV
Sbjct: 310 CSDKT--LFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVD 367
Query: 367 EAWHFFESLDKC-GMTPSSEHYACMVDVLARAGQLATAYQFICQMPME--PTASMLG--A 421
EA + F+ + + +HY CM D+L RAG + A + I QMP + +L
Sbjct: 368 EARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSG 427
Query: 422 LLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMER-RG 480
LL GC H N E+AE ++ L P+ G Y + +YA +RW++ +RE ++R +
Sbjct: 428 LLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKK 487
Query: 481 VKKSPGFSSV 490
VKK+ GFS V
Sbjct: 488 VKKNVGFSKV 497
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 288 bits (736), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 160/467 (34%), Positives = 258/467 (55%), Gaps = 5/467 (1%)
Query: 62 GDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGL-APDYLTYPFL 120
G +D + F Q++ I WN++I G++ +++L IF KMLR L +PD T +
Sbjct: 226 GQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASV 285
Query: 121 AKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNL 180
A A L G +H+HI+ TG + + N+LI MY+ CG + A ++ + K+L
Sbjct: 286 LSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDL 345
Query: 181 V--SWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMR 238
+ ++LDGY K G+M A +F S+ +RDV +W+++I GY + G Y EA+ +F M
Sbjct: 346 KIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMV 405
Query: 239 AVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIE 298
G + N T+ ++L + L +L GK +H V +G ++ + +L+ MYAK G I
Sbjct: 406 GGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNIT 465
Query: 299 EALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXX 358
A F + + + D + W +MI LA HG EE+L LF+ M G++ D +TY
Sbjct: 466 SASRAFDLI-RCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSA 524
Query: 359 XXHGGLVKEAWHFFESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTAS 417
H GLV + +F+ + D + P+ HYACMVD+ RAG L A +FI +MP+EP
Sbjct: 525 CTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVV 584
Query: 418 MLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAME 477
G+LLS C H+N +L ++ +L+ LEP++ G Y L+N+Y+ +W++A +R++M+
Sbjct: 585 TWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMK 644
Query: 478 RRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
VKK GFS +E+ F D TH + E Y + + ++K
Sbjct: 645 DGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIK 691
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 131/439 (29%), Positives = 205/439 (46%), Gaps = 41/439 (9%)
Query: 55 FSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDY 114
SA S GD+D + F QL W T+I GY N +++ + M++ G+ P
Sbjct: 87 LSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQ 146
Query: 115 LTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDS 174
T + + A ETG VH+ I+K G + + NSL++MYA CG+ + A VFD
Sbjct: 147 FTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDR 206
Query: 175 VQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVF 234
+ +++ SWN+M+ + + G+M LA FE M+ERD+ +W+S+I G+ + G A+ +F
Sbjct: 207 MVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIF 266
Query: 235 EKM-RAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAK 293
KM R + T+ SVL ACA+L L GK +H +IV G ++ ++ +L+ MY++
Sbjct: 267 SKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSR 326
Query: 294 CGAIEEA--LLVFHG-----------------------------VSKRKTDVLIWNAMIG 322
CG +E A L+ G VS + DV+ W AMI
Sbjct: 327 CGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIV 386
Query: 323 GLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTP 382
G HGS E++ LF+ M G + + T + S K G
Sbjct: 387 GYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIY 446
Query: 383 SSEHYACMVDVLARAGQLAT---AYQFI-CQMPMEPTASMLGALLSGCINHRNFELAEIV 438
S ++ + A+AG + + A+ I C+ SM+ AL EL E +
Sbjct: 447 SVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETM 506
Query: 439 GRKLIE-LEPDHDGRYIGL 456
L+E L PDH Y+G+
Sbjct: 507 ---LMEGLRPDHI-TYVGV 521
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 168/370 (45%), Gaps = 22/370 (5%)
Query: 111 APDYLTYPFLAKASARLLNQETGVS--------VHAHIIKTGHEYDRFIQNSLIHMYASC 162
AP L+ L + LL + S VH +IK+G + ++ N+L+++Y+
Sbjct: 3 APVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKT 62
Query: 163 GNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYV 222
G + A K+FD + + SWN++L Y+K G+M + F+ + +RD SW+++I GY
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYK 122
Query: 223 KAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLV 282
G+Y +A+ V M G + + T+ +VL + A +E GK +H +IV GL +
Sbjct: 123 NIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVS 182
Query: 283 LQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQA 342
+ SL++MYAKCG A VF + R D+ WNAMI G ++ ++ F+ M
Sbjct: 183 VSNSLLNMYAKCGDPMMAKFVFDRMVVR--DISSWNAMIALHMQVGQMDLAMAQFEQMA- 239
Query: 343 VGIKADEVTYXXXXXXXXHGGLVKEAWHFFES-LDKCGMTPSSEHYACMVDVLARAGQLA 401
+ D VT+ G A F L ++P A ++ A +L
Sbjct: 240 ---ERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLC 296
Query: 402 TAYQF---ICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSN 458
Q I + + +L AL+S E A R+LIE D + G +
Sbjct: 297 IGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETA----RRLIEQRGTKDLKIEGFTA 352
Query: 459 VYAGVKRWDD 468
+ G + D
Sbjct: 353 LLDGYIKLGD 362
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 156/460 (33%), Positives = 257/460 (55%), Gaps = 9/460 (1%)
Query: 72 SQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLN-- 129
+Q +S W + I + + ++ F M G+ P+++T+ L +
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 130 QETGVSVHAHIIKTGHEYDR-FIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLD 188
+ G +H + K G + + + ++I MY+ G A VFD +++KN V+WN+M+D
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 189 GYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVT 248
GY + G++ A K+F+ M ERD+ SW+++I+G+VK G EA+ F +M+ G K + V
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 249 MVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVS 308
+++ L AC +LGAL G +H+Y++ + + SL+D+Y +CG +E A VF+ +
Sbjct: 209 IIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME 268
Query: 309 KRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEA 368
KR V+ WN++I G A +G+ ESL F+ MQ G K D VT+ H GLV+E
Sbjct: 269 KRT--VVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG 326
Query: 369 WHFFESLDKCG--MTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGC 426
+F+ + KC ++P EHY C+VD+ +RAG+L A + + MPM+P ++G+LL+ C
Sbjct: 327 LRYFQIM-KCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAAC 385
Query: 427 INH-RNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSP 485
NH N LAE + + L +L Y+ LSN+YA +W+ A MR M+ G+KK P
Sbjct: 386 SNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQP 445
Query: 486 GFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMKL 525
GFSS+EI F+A D H ++ +L ++ ++L
Sbjct: 446 GFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRL 485
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 145/366 (39%), Gaps = 76/366 (20%)
Query: 1 MPGVSPSFKIANLNQTLLSLLDGCKSMLELKQ-----LHAILITSGLSQDEPFISKVLCF 55
+ GV P+ + T ++LL GC + LH GL ++ + +
Sbjct: 64 LAGVEPN------HITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAI-I 116
Query: 56 SALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRH------- 108
S G + F + WNT+I GY S + +F KM
Sbjct: 117 GMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTA 176
Query: 109 ------------------------GLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTG 144
G+ PDY+ A L G+ VH +++
Sbjct: 177 MINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQD 236
Query: 145 HEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFE 204
+ + + NSLI +Y CG + +A +VF +++++ +VSWNS++ G+A G AH
Sbjct: 237 FKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGN---AH---- 289
Query: 205 SMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEK 264
E++ F KM+ G K + VT L AC+H+G +E+
Sbjct: 290 ------------------------ESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEE 325
Query: 265 G-KMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGG 323
G + D + + LVD+Y++ G +E+AL + + + +V+I +++
Sbjct: 326 GLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVI-GSLLAA 384
Query: 324 LATHGS 329
+ HG+
Sbjct: 385 CSNHGN 390
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 281 bits (720), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 164/513 (31%), Positives = 268/513 (52%), Gaps = 44/513 (8%)
Query: 19 SLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPR 78
+++ C S ++KQL + +T+G Q S++L A+S GD+ ++ + F + P
Sbjct: 8 TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPL 67
Query: 79 IFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAP------DYLTYPFLAKASARLLNQET 132
WN IIRG++ S +P + S + ML+ + D LT F KA AR L
Sbjct: 68 TNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
+H I + G D + +L LD Y+K
Sbjct: 128 MDQLHCQINRRGLSADSLLCTTL-------------------------------LDAYSK 156
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
G+++ A+K+F+ M RDV SW++LI G V EAM ++++M G + +EVT+V+
Sbjct: 157 NGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAA 216
Query: 253 LCACAHLGALEKGK-MMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRK 311
L AC+HLG +++G+ + H Y DN +++ + +DMY+KCG +++A VF + +K
Sbjct: 217 LGACSHLGDVKEGENIFHGYSNDN-----VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKK 271
Query: 312 TDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHF 371
+ V+ WN MI G A HG +L +F ++ GIK D+V+Y H GLV+
Sbjct: 272 S-VVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSV 330
Query: 372 FESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRN 431
F ++ G+ + +HY C+VD+L+RAG+L A+ IC M M P + +LL + +
Sbjct: 331 FNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSD 390
Query: 432 FELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVE 491
E+AEI R++ E+ ++DG ++ LSNVYA RW D +R+ ME + VKK PG S +E
Sbjct: 391 VEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIE 450
Query: 492 ICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
G F DK+H E Y ++ + ++++
Sbjct: 451 AKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIR 483
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 281 bits (719), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 167/543 (30%), Positives = 272/543 (50%), Gaps = 42/543 (7%)
Query: 20 LLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRI 79
+LD + L+ +H+ +I L + K++ A ++ D+ + + F ++ +
Sbjct: 48 VLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLM--RAYASLKDVASARKVFDEIPERNV 105
Query: 80 FIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAH 139
I N +IR Y N+ + + +F M + PD+ T+P + KA + G +H
Sbjct: 106 IIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGS 165
Query: 140 IIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK------- 192
K G F+ N L+ MY CG + A V D + +++VSWNS++ GYA+
Sbjct: 166 ATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDA 225
Query: 193 ---CGEM---------------------------VLAHKVFESMSERDVRSWSSLIDGYV 222
C EM + +F M ++ + SW+ +I Y+
Sbjct: 226 LEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYM 285
Query: 223 KAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLV 282
K EA+ ++ +M A G + + V++ SVL AC AL GK +H YI L L+
Sbjct: 286 KNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL 345
Query: 283 LQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQA 342
L+ +L+DMYAKCG +E+A VF + R DV+ W AMI G +++ LF +Q
Sbjct: 346 LENALIDMYAKCGCLEKARDVFENMKSR--DVVSWTAMISAYGFSGRGCDAVALFSKLQD 403
Query: 343 VGIKADEVTYXXXXXXXXHGGLVKEAWHFFESL-DKCGMTPSSEHYACMVDVLARAGQLA 401
G+ D + + H GL++E F+ + D +TP EH ACMVD+L RAG++
Sbjct: 404 SGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVK 463
Query: 402 TAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYA 461
AY+FI M MEP + GALL C H + ++ + KL +L P+ G Y+ LSN+YA
Sbjct: 464 EAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYA 523
Query: 462 GVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAY 521
RW++ +R M+ +G+KK+PG S+VE+ + F+ D++H S+E Y L+ +
Sbjct: 524 KAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVK 583
Query: 522 QMK 524
+MK
Sbjct: 584 KMK 586
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 281 bits (719), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 168/518 (32%), Positives = 283/518 (54%), Gaps = 14/518 (2%)
Query: 16 TLLSLLDGCKSMLEL---KQLHA-ILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAF 71
T++S+L C + +L K++H+ IL S L +D + ++ F A GD +Y AF
Sbjct: 332 TIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYA--RFGDTSAAYWAF 389
Query: 72 SQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQE 131
S +S+ I WN I+ +++S Q L++ +L + D +T L K +
Sbjct: 390 SLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIG 449
Query: 132 TGVSVHAHIIKTGHEYDR---FIQNSLIHMYASCGNIVWAHKVFDSVQEK-NLVSWNSML 187
VH + +K G +D + N+L+ YA CGN+ +AHK+F + E+ LVS+NS+L
Sbjct: 450 KVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLL 509
Query: 188 DGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEV 247
GY G A +F MS D+ +WS ++ Y ++ EA+ VF +++A G + N V
Sbjct: 510 SGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTV 569
Query: 248 TMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGV 307
T++++L CA L +L + H YI+ GL + L+ +L+D+YAKCG+++ A VF
Sbjct: 570 TIMNLLPVCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSD 628
Query: 308 SKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKE 367
++R D++++ AM+ G A HG +E+L ++ M IK D V H GL+++
Sbjct: 629 ARR--DLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQD 686
Query: 368 AWHFFESLDKC-GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGC 426
++S+ GM P+ E YAC VD++AR G+L AY F+ QMP+EP A++ G LL C
Sbjct: 687 GLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRAC 746
Query: 427 INHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPG 486
+ +L V L++ E D G ++ +SN+YA +W+ +R M+++ +KK G
Sbjct: 747 TTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAG 806
Query: 487 FSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
S +E+ G F++ D +H + + ++N + QMK
Sbjct: 807 CSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMK 844
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 186/400 (46%), Gaps = 55/400 (13%)
Query: 16 TLLSLLDGCKSMLEL------KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYR 69
T+ ++L C SM + +Q+H+ ++ Q F+ L S G I+ +
Sbjct: 226 TIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSL-VSFYLRVGRIEEAAS 284
Query: 70 AFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHG-LAPDYLTYPFLAKASARLL 128
F+++ S + WN +I GY+++ ++ +F ++ G ++PD +T + A+L
Sbjct: 285 LFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLT 344
Query: 129 NQETGVSVHAHIIKTGHEY---DRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNS 185
+ +G +H++I++ H Y D + N+LI YA G+ A+ F + K+++SWN+
Sbjct: 345 DLASGKEIHSYILR--HSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNA 402
Query: 186 MLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKAN 245
+LD +A + K F+ ++ EA+ + +
Sbjct: 403 ILDAFAD------SPKQFQFLNL--------------LHHLLNEAITL-----------D 431
Query: 246 EVTMVSVLCACAHLGALEKGKMMHKYIVDNGL---PLTLVLQTSLVDMYAKCGAIEEALL 302
VT++S+L C ++ + K K +H Y V GL L +L+D YAKCG +E A
Sbjct: 432 SVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHK 491
Query: 303 VFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHG 362
+F G+S+R+T ++ +N+++ G GS +++ LF +M D T+
Sbjct: 492 IFLGLSERRT-LVSYNSLLSGYVNSGSHDDAQMLFTEMSTT----DLTTWSLMVRIYAES 546
Query: 363 GLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLAT 402
EA F + GM P++ ++++L QLA+
Sbjct: 547 CCPNEAIGVFREIQARGMRPNT---VTIMNLLPVCAQLAS 583
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 121/505 (23%), Positives = 201/505 (39%), Gaps = 106/505 (20%)
Query: 64 IDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKM-LRHGLAPDYLTYPFLAK 122
+D + F Q+ S +WN ++ G S S +++ F M P +T+ +
Sbjct: 72 MDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGR-ETMRFFKAMHFADEPKPSSVTFAIVLP 130
Query: 123 ASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVW-AHKVFDSVQEKNLV 181
RL + G S+H++IIK G E D + N+L+ MYA G I A+ FD + +K++V
Sbjct: 131 LCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVV 190
Query: 182 SWNSMLDGYAKCGEMVLAHKVFESM-----------------------------SERDV- 211
SWN+++ G+++ M A + F M S R +
Sbjct: 191 SWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIH 250
Query: 212 -----RSW--------SSLIDGYVKAGEYREAMAVFEKMRA------------------- 239
RSW +SL+ Y++ G EA ++F +M +
Sbjct: 251 SYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEW 310
Query: 240 ---------------VGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPL-TLVL 283
V P + VT++S+L CA L L GK +H YI+ + L +
Sbjct: 311 FKAFQLFHNLVHKGDVSP--DSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSV 368
Query: 284 QTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAV 343
+L+ YA+ G A F +S + D++ WNA++ A + L L +
Sbjct: 369 GNALISFYARFGDTSAAYWAFSLMSTK--DIISWNAILDAFADSPKQFQFLNLLHHLLNE 426
Query: 344 GIKADEVTYXXXXXXXXHG---GLVKEAWHFFESLDKCGMTPSSEHYA---CMVDVLARA 397
I D VT + G VKE H + K G+ E ++D A+
Sbjct: 427 AITLDSVTILSLLKFCINVQGIGKVKEV-HGYSV--KAGLLHDEEEPKLGNALLDAYAKC 483
Query: 398 GQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLS 457
G + A++ + T +LLSG +N + + A+++ E+ + +
Sbjct: 484 GNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQML---FTEMSTTDLTTWSLMV 540
Query: 458 NVYA---------GVKRWDDARGMR 473
+YA GV R ARGMR
Sbjct: 541 RIYAESCCPNEAIGVFREIQARGMR 565
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 103/235 (43%), Gaps = 38/235 (16%)
Query: 106 LRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNI 165
L G D+ + + KA A + + +G ++H + K GH +C +
Sbjct: 13 LLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGH--------------IACSEV 58
Query: 166 VWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGY-VKA 224
S+L+ YAKC M K+F M D W+ ++ G V
Sbjct: 59 S-----------------KSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSC 101
Query: 225 GEYREAMAVFEKMR-AVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVL 283
G RE M F+ M A PK + VT VL C LG GK MH YI+ GL ++
Sbjct: 102 G--RETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLV 159
Query: 284 QTSLVDMYAKCGAI-EEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLF 337
+LV MYAK G I +A F G++ + DV+ WNA+I G + + + ++ F
Sbjct: 160 GNALVSMYAKFGFIFPDAYTAFDGIADK--DVVSWNAIIAGFSENNMMADAFRSF 212
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 281 bits (719), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 166/500 (33%), Positives = 275/500 (55%), Gaps = 12/500 (2%)
Query: 25 KSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNT 84
+ ++E +++H + +GL D ++S L ++ G I+ +++ F ++ + WN
Sbjct: 60 RKVIEGEKVHGYAVKAGLEFD-SYVSNSL-MGMYASLGKIEITHKVFDEMPQRDVVSWNG 117
Query: 85 IIRGYSNSKNPIQSLSIFLKMLRH-GLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKT 143
+I Y + ++ +F +M + L D T A + L N E G ++ ++ T
Sbjct: 118 LISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-T 176
Query: 144 GHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVF 203
E I N+L+ M+ CG + A VFDS+++KN+ W SM+ GY G + A +F
Sbjct: 177 EFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLF 236
Query: 204 ESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALE 263
E +DV W+++++GYV+ + EA+ +F M+ G + + +VS+L CA GALE
Sbjct: 237 ERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALE 296
Query: 264 KGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGG 323
+GK +H YI +N + + V+ T+LVDMYAKCG IE AL VF+ + +R D W ++I G
Sbjct: 297 QGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKER--DTASWTSLIYG 354
Query: 324 LATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESL-DKCGMTP 382
LA +G +L L+ +M+ VG++ D +T+ HGG V E F S+ ++ + P
Sbjct: 355 LAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQP 414
Query: 383 SSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLG---ALLSGCINHRNFELAEIVG 439
SEH +C++D+L RAG L A + I +M E +++ +LLS N+ N ++AE V
Sbjct: 415 KSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVA 474
Query: 440 RKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRRF 499
KL ++E + L++VYA RW+D +R M+ G++K PG SS+EI GV F
Sbjct: 475 EKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEF 534
Query: 500 IAHDK--THSDSEETYSMLN 517
I D +H +E SML+
Sbjct: 535 IVGDDLLSHPKMDEINSMLH 554
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 174/376 (46%), Gaps = 62/376 (16%)
Query: 72 SQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQE 131
S L +P + ++N +++ ++ K+ + L++F ++ GL PD T P + K+ RL
Sbjct: 4 SLLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVI 63
Query: 132 TGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYA 191
G VH + +K G E+D ++ NSL+ MYAS G I HKVFD + ++++VSWN ++
Sbjct: 64 EGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLI---- 119
Query: 192 KCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKM-RAVGPKANEVTMV 250
YV G + +A+ VF++M + K +E T+V
Sbjct: 120 ---------------------------SSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIV 152
Query: 251 SVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR 310
S L AC+ L LE G+ +++++V +++ + +LVDM+ KCG +++A VF + +
Sbjct: 153 STLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDK 211
Query: 311 KT-----------------------------DVLIWNAMIGGLATHGSVEESLGLFKDMQ 341
DV++W AM+ G +E+L LF+ MQ
Sbjct: 212 NVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQ 271
Query: 342 AVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLA 401
GI+ D G +++ +++ +T +VD+ A+ G +
Sbjct: 272 TAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIE 331
Query: 402 TAYQFICQMPMEPTAS 417
TA + ++ TAS
Sbjct: 332 TALEVFYEIKERDTAS 347
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 275 bits (703), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 164/488 (33%), Positives = 267/488 (54%), Gaps = 11/488 (2%)
Query: 13 LNQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCF-SALSNSGDIDYSYRAF 71
+ + LL LL G + L ++HA L+ L ++ + +LSNS DY+ R F
Sbjct: 3 IERKLLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNS---DYANRVF 59
Query: 72 SQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQE 131
S + +P + ++N +I+ YS P++SLS F M G+ D TY L K+ + L +
Sbjct: 60 SHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLR 119
Query: 132 TGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYA 191
G VH +I+TG I+ ++ +Y S G + A KVFD + E+N+V WN M+ G+
Sbjct: 120 FGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFC 179
Query: 192 KCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVS 251
G++ +F+ MSER + SW+S+I K G REA+ +F +M G +E T+V+
Sbjct: 180 DSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVT 239
Query: 252 VLCACAHLGALEKGKMMHKYIVDNGLPLTLV-LQTSLVDMYAKCGAIEEALLVFHGVSKR 310
VL A LG L+ GK +H +GL + + +LVD Y K G +E A +F + +R
Sbjct: 240 VLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRR 299
Query: 311 KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVG-IKADEVTYXXXXXXXXHGGLVKEAW 369
+V+ WN +I G A +G E + LF M G + +E T+ + G V+
Sbjct: 300 --NVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGE 357
Query: 370 HFFE-SLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCIN 428
F +++ + +EHY MVD+++R+G++ A++F+ MP+ A+M G+LLS C +
Sbjct: 358 ELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRS 417
Query: 429 HRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFS 488
H + +LAE+ +L+++EP + G Y+ LSN+YA RW D +R M++ ++KS G S
Sbjct: 418 HGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQS 477
Query: 489 SVEICGVS 496
+ IC VS
Sbjct: 478 T--ICDVS 483
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 275 bits (703), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 165/505 (32%), Positives = 272/505 (53%), Gaps = 15/505 (2%)
Query: 31 KQLHAILITSGLSQ-DEPFISKVLCFSALSNSGDIDYSYRAFSQ--LSSPRIFIWNTIIR 87
K+LHA+L TSGL + ++S L F ++SG++ + + F + LS W T++
Sbjct: 26 KELHAVLTTSGLKKAPRSYLSNAL-FQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLS 84
Query: 88 GYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEY 147
+S + S+ +F++M R + D ++ L A+L + H +K G
Sbjct: 85 SFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLT 144
Query: 148 DRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMS 207
+ N+L+ MY CG + ++F+ ++EK++VSW +LD K + +VF M
Sbjct: 145 SVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMP 204
Query: 208 ERDVRSWSSLIDGYVKAGEYREAMAVFEKMR-AVGPKANEVTMVSVLCACAHLGALEKGK 266
ER+ +W+ ++ GY+ AG RE + + +M G N VT+ S+L ACA G L G+
Sbjct: 205 ERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGR 264
Query: 267 MMHKYIVDNGLPL-------TLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNA 319
+H Y + + + +++ T+LVDMYAKCG I+ ++ VF + KR +V+ WNA
Sbjct: 265 WVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKR--NVVTWNA 322
Query: 320 MIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCG 379
+ GLA HG + +F M +K D++T+ H G+V E W F SL G
Sbjct: 323 LFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYG 381
Query: 380 MTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVG 439
+ P +HYACMVD+L RAG + A + +MP+ P +LG+LL C H E+AE +
Sbjct: 382 LEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIK 441
Query: 440 RKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRRF 499
R+LI++ P + I +SN+Y R D A G+R ++ +RG++K PG SS+ + RF
Sbjct: 442 RELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRF 501
Query: 500 IAHDKTHSDSEETYSMLNFVAYQMK 524
+ D++H ++E Y LN V +++
Sbjct: 502 SSGDRSHPRTKEIYLKLNEVIERIR 526
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 275 bits (702), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 171/511 (33%), Positives = 264/511 (51%), Gaps = 40/511 (7%)
Query: 18 LSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSP 77
L L C S+ L Q+H + S L D IS+++ S+LS + D+ ++ S
Sbjct: 17 LIFLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDS 76
Query: 78 RIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVH 137
WN + RGYS+S +P++S+ ++ +M R G+ P+ LT+PFL KA A L G +
Sbjct: 77 TPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQ 136
Query: 138 AHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMV 197
++K G ++D ++ N+LIH+Y +C K D
Sbjct: 137 VEVLKHGFDFDVYVGNNLIHLYGTC------KKTSD------------------------ 166
Query: 198 LAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACA 257
A KVF+ M+ER+V SW+S++ V+ G+ F +M +E TMV +L AC
Sbjct: 167 -ARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG 225
Query: 258 HLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIW 317
G L GK++H ++ L L L T+LVDMYAK G +E A LVF + + +V W
Sbjct: 226 --GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDK--NVWTW 281
Query: 318 NAMIGGLATHGSVEESLGLF-KDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLD 376
+AMI GLA +G EE+L LF K M+ ++ + VT+ H GLV + + +F ++
Sbjct: 282 SAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEME 341
Query: 377 KC-GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFE-- 433
K + P HY MVD+L RAG+L AY FI +MP EP A + LLS C H + +
Sbjct: 342 KIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDE 401
Query: 434 -LAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEI 492
+ E V ++LIELEP G + ++N +A + W +A +R M+ +KK G S +E+
Sbjct: 402 GIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLEL 461
Query: 493 CGVSRRFIAHDKTHSDSEETYSMLNFVAYQM 523
G RF + S+ Y +L+ +Q+
Sbjct: 462 GGSFHRFFSGYDPRSEYVSIYELLDLFKFQL 492
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 275 bits (702), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 160/497 (32%), Positives = 260/497 (52%), Gaps = 35/497 (7%)
Query: 15 QTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQL 74
TLL K +++ + +HA ++ S D + +L A G ++ + + F ++
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYA--KCGSLEEARKVFEKM 121
Query: 75 SSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGV 134
W T+I GYS P +L F +MLR G +P+ T + KA+A G
Sbjct: 122 PQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGH 181
Query: 135 SVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCG 194
+H +K G FDS N+ +++LD Y + G
Sbjct: 182 QLHGFCVKCG---------------------------FDS----NVHVGSALLDLYTRYG 210
Query: 195 EMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLC 254
M A VF+++ R+ SW++LI G+ + +A+ +F+ M G + + + S+
Sbjct: 211 LMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFG 270
Query: 255 ACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDV 314
AC+ G LE+GK +H Y++ +G L +L+DMYAK G+I +A +F ++KR DV
Sbjct: 271 ACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKR--DV 328
Query: 315 LIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFES 374
+ WN+++ A HG +E++ F++M+ VGI+ +E+++ H GL+ E WH++E
Sbjct: 329 VSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYEL 388
Query: 375 LDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFEL 434
+ K G+ P + HY +VD+L RAG L A +FI +MP+EPTA++ ALL+ C H+N EL
Sbjct: 389 MKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTEL 448
Query: 435 AEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICG 494
+ EL+PD G ++ L N+YA RW+DA +R+ M+ GVKK P S VEI
Sbjct: 449 GAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIEN 508
Query: 495 VSRRFIAHDKTHSDSEE 511
F+A+D+ H EE
Sbjct: 509 AIHMFVANDERHPQREE 525
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 274 bits (701), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 154/505 (30%), Positives = 265/505 (52%), Gaps = 36/505 (7%)
Query: 15 QTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQL 74
+ ++ +L GC SM +L+++H+ +I +GL + +L F A+S +G + ++ F
Sbjct: 6 RVIVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHF 65
Query: 75 SS-PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLA-PDYLTYPFLAKASARLLNQET 132
S P WN +IRG+SNS +P+ S+ + +ML ++ PD T+ F K+ R+ +
Sbjct: 66 DSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPK 125
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
+ +H +I++G D + SL+ Y++ G++
Sbjct: 126 CLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVE-------------------------- 159
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
+A KVF+ M RD+ SW+ +I + G + +A++++++M G + T+V++
Sbjct: 160 -----IASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVAL 214
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT 312
L +CAH+ AL G M+H+ D + + +L+DMYAKCG++E A+ VF+G+ KR
Sbjct: 215 LSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKR-- 272
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFF 372
DVL WN+MI G HG E++ F+ M A G++ + +T+ H GLVKE F
Sbjct: 273 DVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHF 332
Query: 373 ESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRN 431
E + + +TP+ +HY CMVD+ RAGQL + + I + LL C HRN
Sbjct: 333 EIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRN 392
Query: 432 FELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVE 491
EL E+ +KL++LE + G Y+ ++++Y+ MR+ + ++ PG+S +E
Sbjct: 393 LELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIE 452
Query: 492 ICGVSRRFIAHDKTHSDSEETYSML 516
I +F+ DK H +S YS L
Sbjct: 453 IGDQVHKFVVDDKMHPESAVIYSEL 477
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 167/472 (35%), Positives = 249/472 (52%), Gaps = 40/472 (8%)
Query: 52 VLCFSAL----SNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLR 107
V+ ++AL ++ G I+ + + F ++ + WN +I GY+ + N ++L +F M++
Sbjct: 200 VVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK 259
Query: 108 HGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVW 167
+ PD T + A A+ + E G VH I G
Sbjct: 260 TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHG----------------------- 296
Query: 168 AHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEY 227
F S NL N+++D Y+KCGE+ A +FE + +DV SW++LI GY Y
Sbjct: 297 ----FGS----NLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLY 348
Query: 228 REAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVD--NGLPLTLVLQT 285
+EA+ +F++M G N+VTM+S+L ACAHLGA++ G+ +H YI G+ L+T
Sbjct: 349 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRT 408
Query: 286 SLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGI 345
SL+DMYAKCG IE A VF+ + + WNAMI G A HG + S LF M+ +GI
Sbjct: 409 SLIDMYAKCGDIEAAHQVFNSILHKSLSS--WNAMIFGFAMHGRADASFDLFSRMRKIGI 466
Query: 346 KADEVTYXXXXXXXXHGGLVKEAWHFFESLDK-CGMTPSSEHYACMVDVLARAGQLATAY 404
+ D++T+ H G++ H F ++ + MTP EHY CM+D+L +G A
Sbjct: 467 QPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAE 526
Query: 405 QFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVK 464
+ I M MEP + +LL C H N EL E LI++EP++ G Y+ LSN+YA
Sbjct: 527 EMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAG 586
Query: 465 RWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSML 516
RW++ R + +G+KK PG SS+EI V FI DK H + E Y ML
Sbjct: 587 RWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 638
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 142/448 (31%), Positives = 249/448 (55%), Gaps = 9/448 (2%)
Query: 14 NQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGD-IDYSYRAFS 72
N LSLL CK++ L+ +HA +I GL +SK++ F LS + + Y+ F
Sbjct: 33 NHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFK 92
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
+ P + IWNT+ RG++ S +P+ +L +++ M+ GL P+ T+PF+ K+ A+ +
Sbjct: 93 TIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKE 152
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G +H H++K G + D ++ SLI MY G + AHKVFD +++VS+ +++ GYA
Sbjct: 153 GQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYAS 212
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
G + A K+F+ + +DV SW+++I GY + G Y+EA+ +F+ M + +E TMV+V
Sbjct: 213 RGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTV 272
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT 312
+ ACA G++E G+ +H +I D+G L + +L+D+Y+KCG +E A +F + +
Sbjct: 273 VSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK-- 330
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFF 372
DV+ WN +IGG +E+L LF++M G ++VT H G +
Sbjct: 331 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH 390
Query: 373 ESLDK--CGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHR 430
+DK G+T +S ++D+ A+ G + A+Q + + + S A++ G H
Sbjct: 391 VYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHG 449
Query: 431 NFELA-EIVGR-KLIELEPDHDGRYIGL 456
+ + ++ R + I ++PD D ++GL
Sbjct: 450 RADASFDLFSRMRKIGIQPD-DITFVGL 476
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 272 bits (695), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 171/528 (32%), Positives = 274/528 (51%), Gaps = 38/528 (7%)
Query: 2 PG-VSPSFKIANLNQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSN 60
PG S F NL +L L +++E K H +I L D ++ ++ +A S
Sbjct: 51 PGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLI--NAYSK 108
Query: 61 SGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFL 120
G ++ + + F + + WNT+I Y+ ++ ++L IFL+M G T +
Sbjct: 109 CGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSV 168
Query: 121 AKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNL 180
A GV+ A K H C ++ + + NL
Sbjct: 169 LSA--------CGVNCDALECKKLH----------------CLSV-------KTCIDLNL 197
Query: 181 VSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAV 240
++LD YAKCG + A +VFESM ++ +WSS++ GYV+ Y EA+ ++ + + +
Sbjct: 198 YVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRM 257
Query: 241 GPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEA 300
+ N+ T+ SV+CAC++L AL +GK MH I +G + + +S VDMYAKCG++ E+
Sbjct: 258 SLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRES 317
Query: 301 LLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXX 360
++F V ++ + +WN +I G A H +E + LF+ MQ G+ +EVT+
Sbjct: 318 YIIFSEVQEKNLE--LWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCG 375
Query: 361 HGGLVKEAWHFFESLDKC-GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASML 419
H GLV+E FF+ + G++P+ HY+CMVD+L RAG L+ AY+ I +P +PTAS+
Sbjct: 376 HTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIW 435
Query: 420 GALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERR 479
G+LL+ C ++N ELAE+ KL ELEP++ G ++ LSN+YA K+W++ R+ +
Sbjct: 436 GSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDC 495
Query: 480 GVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSML-NFVAYQMKLG 526
VKK G S ++I F + H E S L N V K G
Sbjct: 496 DVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFG 543
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 148/298 (49%), Gaps = 13/298 (4%)
Query: 141 IKTGHEYDRFIQNSLIH----MYASCGNIVWAH----KVFDSVQEKNLVSWNSMLDGYAK 192
+ G + F +L+H + A G ++ A K+ E ++ N +++ Y+K
Sbjct: 49 VSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSK 108
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
CG + LA +VF+ M ER + SW+++I Y + EA+ +F +MR G K +E T+ SV
Sbjct: 109 CGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSV 168
Query: 253 LCACA-HLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRK 311
L AC + ALE K +H V + L L + T+L+D+YAKCG I++A+ VF + +
Sbjct: 169 LSACGVNCDALE-CKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKS 227
Query: 312 TDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHF 371
+ + W++M+ G + + EE+L L++ Q + ++ ++ T + + E
Sbjct: 228 S--VTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQM 285
Query: 372 FESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINH 429
+ K G + + VD+ A+ G L +Y ++ E + ++SG H
Sbjct: 286 HAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEV-QEKNLELWNTIISGFAKH 342
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 172/585 (29%), Positives = 288/585 (49%), Gaps = 79/585 (13%)
Query: 16 TLLSLLDGCKSMLELK---QLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
T +L C S L + QLH +++ SG+ + + +L S S G D + + F
Sbjct: 241 TFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLL--SMYSKCGRFDDASKLFR 298
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQE- 131
+S WN +I GY S +SL+ F +M+ G+ PD +T+ L + ++ N E
Sbjct: 299 MMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEY 358
Query: 132 ------------------------------TGVSVHAHIIKTGHEYDRFIQNSLIHMYAS 161
GVS+ +I + D + ++I Y
Sbjct: 359 CKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLH 418
Query: 162 CGNIV-------WAHKVFDSVQEKNLVSW------------------------------- 183
G + W KV S E LVS
Sbjct: 419 NGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNI 478
Query: 184 -NSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGP 242
+++D YAKCG M LA+++FE +S+RD+ SW+S+I ++ A+ +F +M G
Sbjct: 479 GCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGI 538
Query: 243 KANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALL 302
+ V++ + L ACA+L + GK +H +++ + L + +++L+DMYAKCG ++ A+
Sbjct: 539 CYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMN 598
Query: 303 VFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDM-QAVGIKADEVTYXXXXXXXXH 361
VF + ++ +++ WN++I HG +++SL LF +M + GI+ D++T+ H
Sbjct: 599 VFK--TMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCH 656
Query: 362 GGLVKEAWHFFESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLG 420
G V E FF S+ + G+ P EHYAC+VD+ RAG+L AY+ + MP P A + G
Sbjct: 657 VGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWG 716
Query: 421 ALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRG 480
LL C H+N ELAE+ KL++L+P + G Y+ +SN +A + W+ +R M+ R
Sbjct: 717 TLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKERE 776
Query: 481 VKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMKL 525
V+K PG+S +EI + F++ D H +S YS+LN + +++L
Sbjct: 777 VQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRL 821
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 162/339 (47%), Gaps = 42/339 (12%)
Query: 20 LLDGCKS---MLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSS 76
LL C + + + KQ+HA LI + +S D ++L A+ G + F +L
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMC--GSFSDCGKMFYRLDL 98
Query: 77 PR--IFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGV 134
R I WN+II + + Q+L+ + KML G++PD T+P L KA L N + G+
Sbjct: 99 RRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK-GI 157
Query: 135 SVHAHIIKT-GHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKC 193
+ + + G + + F+ +SLI Y G I K+FD V +K+ V WN ML+GYAKC
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 194 GEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVL 253
G + S+I G F MR N VT VL
Sbjct: 218 GAL------------------DSVIKG-------------FSVMRMDQISPNAVTFDCVL 246
Query: 254 CACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTD 313
CA ++ G +H +V +G+ ++ SL+ MY+KCG ++A +F +S + D
Sbjct: 247 SVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS--RAD 304
Query: 314 VLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
+ WN MI G G +EESL F +M + G+ D +T+
Sbjct: 305 TVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITF 343
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/524 (23%), Positives = 214/524 (40%), Gaps = 89/524 (16%)
Query: 3 GVSPSFKIANLNQTLLSLLDGCKSMLELKQLHAILIT-SGLSQD-EPFISKVLCFSALSN 60
GVSP T L+ C ++ K + + T S L D F++ L A
Sbjct: 133 GVSPDV------STFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSL-IKAYLE 185
Query: 61 SGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFL 120
G ID + F ++ IWN ++ GY+ + F M ++P+ +T+ +
Sbjct: 186 YGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCV 245
Query: 121 AKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNL 180
A L + GV +H ++ +G +++ I+NSL+ MY+ CG A K+F + +
Sbjct: 246 LSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADT 305
Query: 181 VSWNSMLDGYAKCGEM--------------VLAHKV-----------FESMS-------- 207
V+WN M+ GY + G M VL + FE++
Sbjct: 306 VTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCY 365
Query: 208 ------ERDVRSWSSLIDGYVKA-------------------------------GEYREA 230
D+ S+LID Y K G Y ++
Sbjct: 366 IMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDS 425
Query: 231 MAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDM 290
+ +F + V NE+T+VS+L L AL+ G+ +H +I+ G + +++DM
Sbjct: 426 LEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDM 485
Query: 291 YAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEV 350
YAKCG + A +F +SKR D++ WN+MI A + ++ +F+ M GI D V
Sbjct: 486 YAKCGRMNLAYEIFERLSKR--DIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCV 543
Query: 351 TYXXXXXXXXH--GGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFIC 408
+ + +A H F + K + + ++D+ A+ G L A
Sbjct: 544 SISAALSACANLPSESFGKAIHGF--MIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFK 601
Query: 409 QMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIE---LEPDH 449
M + S ++++ C NH + + + +++E + PD
Sbjct: 602 TMKEKNIVSW-NSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQ 644
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 151/328 (46%), Gaps = 39/328 (11%)
Query: 9 KIANLNQTLLSLLDGCKSMLELK---QLHAILITSGLSQDEPFISKVLCFSALSNSGDID 65
KI+ TL+S+L +L LK +LH +I G V+ + G ++
Sbjct: 436 KISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVI--DMYAKCGRMN 493
Query: 66 YSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASA 125
+Y F +LS I WN++I + S NP ++ IF +M G+ D ++ A A
Sbjct: 494 LAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACA 553
Query: 126 RLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNS 185
L ++ G ++H +IK D + +++LI MYA CGN+ A VF +++EKN+VSWNS
Sbjct: 554 NLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNS 613
Query: 186 MLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKM-RAVGPKA 244
++ A CG G+ ++++ +F +M G +
Sbjct: 614 II---AACGN----------------------------HGKLKDSLCLFHEMVEKSGIRP 642
Query: 245 NEVTMVSVLCACAHLGALEKG-KMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLV 303
+++T + ++ +C H+G +++G + D G+ +VD++ + G + EA
Sbjct: 643 DQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYET 702
Query: 304 FHGVSKRKTDVLIWNAMIGGLATHGSVE 331
+ D +W ++G H +VE
Sbjct: 703 VKSM-PFPPDAGVWGTLLGACRLHKNVE 729
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 164/490 (33%), Positives = 264/490 (53%), Gaps = 52/490 (10%)
Query: 14 NQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQ 73
N L+L+ CKS+ LKQ+HA +IT GLS +SK+L LS++ + Y+ Q
Sbjct: 9 NHRCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLL---HLSSTVCLSYALSILRQ 65
Query: 74 LSSPRIFIWNTIIRGYSNSKNPIQS---LSIFLKMLR---HGLAPDYLTYPFLAKASARL 127
+ +P +F++NT+I ++ N Q+ S++ ++L + + P+ TYP L KAS
Sbjct: 66 IPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFD 125
Query: 128 LN-QETGVSVHAHIIKTGH--EYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWN 184
G ++HAH++K +DRF+Q +L+ YA+C
Sbjct: 126 AQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANC---------------------- 163
Query: 185 SMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEY---REAMAVFEKMRAVG 241
G++ A +FE + E D+ +W++L+ Y + E E + +F +M+
Sbjct: 164 ---------GKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQV-- 212
Query: 242 PKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEAL 301
+ NE+++V+++ +CA+LG +G H Y++ N L L + TSL+D+Y+KCG + A
Sbjct: 213 -RPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFAR 271
Query: 302 LVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXH 361
VF +S+R DV +NAMI GLA HG +E + L+K + + G+ D T+ H
Sbjct: 272 KVFDEMSQR--DVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSH 329
Query: 362 GGLVKEAWHFFESLDKC-GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLG 420
GLV E F S+ G+ P EHY C+VD+L R+G+L A + I +MP++P A++
Sbjct: 330 SGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWR 389
Query: 421 ALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRG 480
+ L H +FE EI + L+ LE ++ G Y+ LSN+YAGV RW D RE M+
Sbjct: 390 SFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHR 449
Query: 481 VKKSPGFSSV 490
V KSPG S++
Sbjct: 450 VNKSPGISTL 459
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/431 (35%), Positives = 247/431 (57%), Gaps = 15/431 (3%)
Query: 75 SSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLR--------HGLAP-DYLTYPFLAKASA 125
+S ++F++N ++R YS + P+ + ++ ++ R L P D TY FL KAS+
Sbjct: 73 NSGKLFLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASS 132
Query: 126 --RLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSW 183
R + G+ +H +K G E ++Q +L+ MY GN++ AHKVFD + E+N V+W
Sbjct: 133 NPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTW 192
Query: 184 NSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGP- 242
N M+ G G+ A E M R V SW+++IDGY + + +EA+ +F +M A
Sbjct: 193 NVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAI 252
Query: 243 KANEVTMVSVLCACAHLGALEKGKMMHKYIVDNG-LPLTLVLQTSLVDMYAKCGAIEEAL 301
K NE+T++++L A +LG L+ +H Y+ G +P + + SL+D YAKCG I+ A
Sbjct: 253 KPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAF 312
Query: 302 LVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXH 361
F + + +++ W MI A HG +E++ +FKDM+ +G+K + VT H
Sbjct: 313 KFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSH 372
Query: 362 GGLVKEAW-HFFESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASML 419
GGL +E + FF ++ ++ +TP +HY C+VD+L R G+L A + ++P+E A +
Sbjct: 373 GGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVW 432
Query: 420 GALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERR 479
LL C + + ELAE V RKL+ELE H G Y+ +SN++ G R+ DA+ R+ M+ R
Sbjct: 433 RMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVR 492
Query: 480 GVKKSPGFSSV 490
GV K PG S V
Sbjct: 493 GVAKLPGHSQV 503
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 152/371 (40%), Gaps = 74/371 (19%)
Query: 56 SALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLR-HGLAPDY 114
+ L+N GD + + ++ + + W TII GY+ P +++ +F +M+ + P+
Sbjct: 197 TGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNE 256
Query: 115 LTYPFLAKASARLLNQETGVSVHAHIIKTGH-EYDRFIQNSLIHMYASCGNIVWAHKVFD 173
+T + A L + + SVHA++ K G D + NSLI YA CG I A K F
Sbjct: 257 ITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFI 316
Query: 174 SVQ--EKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAM 231
+ KNLVSW +M+ +A I G K EA+
Sbjct: 317 EIPNGRKNLVSWTTMISAFA--------------------------IHGMGK-----EAV 345
Query: 232 AVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQ--TSLVD 289
++F+ M +G K N VTM+SVL AC+H G E+ + + N +T ++ LVD
Sbjct: 346 SMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVD 405
Query: 290 MYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADE 349
M + G +EEA + + + V +W ++G + + E A+
Sbjct: 406 MLRRKGRLEEAEKIALEIPIEEKAV-VWRMLLGACSVYDDAE--------------LAER 450
Query: 350 VTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQ 409
VT HGG Y M ++ G+ A +F Q
Sbjct: 451 VTRKLMELERSHGG----------------------DYVLMSNIFCGTGRFLDAQRFRKQ 488
Query: 410 MPMEPTASMLG 420
M + A + G
Sbjct: 489 MDVRGVAKLPG 499
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/415 (37%), Positives = 236/415 (56%), Gaps = 10/415 (2%)
Query: 81 IWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHI 140
++NT+IR Y + SL++F ML + P+ LT+P L KA+ + GV++H
Sbjct: 53 VYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQA 112
Query: 141 IKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAH 200
+K G +D F+Q S + Y G++ + K+FD + +V+ NS+LD + GEM A
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 201 KVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKM----RAVGPKANEVTMVSVLCAC 256
+ F+ M DV SW+++I+G+ K G + +A+ VF +M RAV NE T VSVL +C
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAV-ITPNEATFVSVLSSC 231
Query: 257 AHL--GALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDV 314
A+ G + GK +H Y++ + LT L T+L+DMY K G +E AL +F + +K V
Sbjct: 232 ANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKK--V 289
Query: 315 LIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFES 374
WNA+I LA++G +++L +F+ M++ + + +T LV F S
Sbjct: 290 CAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSS 349
Query: 375 L-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFE 433
+ + + P+SEHY C+VD++ RAG L A FI +P EP AS+LGALL C H N E
Sbjct: 350 ICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTE 409
Query: 434 LAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFS 488
L VG++LI L+P H G+Y+ LS A W +A MR+AM G++K P +S
Sbjct: 410 LGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/303 (19%), Positives = 128/303 (42%), Gaps = 50/303 (16%)
Query: 55 FSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKML---RHGLA 111
A +G++DY++ F ++ + W T+I G+S ++L +F +M+ R +
Sbjct: 159 LDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVIT 218
Query: 112 PDYLTYPFLAKASARLLNQ---ETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWA 168
P+ T+ + + A +Q G +H +++ + +L+ MY G++ A
Sbjct: 219 PNEATFVSVLSSCAN-FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMA 277
Query: 169 HKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYR 228
+FD +++K + +WN+++ A G +
Sbjct: 278 LTIFDQIRDKKVCAWNAIISALA-------------------------------SNGRPK 306
Query: 229 EAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTS-- 286
+A+ +FE M++ N +T++++L ACA ++ G + I ++ TS
Sbjct: 307 QALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSE----YKIIPTSEH 362
Query: 287 ---LVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAV 343
+VD+ + G + +A + + D + A++G H + E LG Q +
Sbjct: 363 YGCVVDLIGRAGLLVDAANFIQSL-PFEPDASVLGALLGACKIHENTE--LGNTVGKQLI 419
Query: 344 GIK 346
G++
Sbjct: 420 GLQ 422
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 269 bits (688), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 152/455 (33%), Positives = 245/455 (53%), Gaps = 11/455 (2%)
Query: 71 FSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQ 130
F ++ + WNTII GY+ S ++ +F + +P + + A S + N+
Sbjct: 242 FDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE------SPVQDVFTWTAMVSGYIQNR 295
Query: 131 ETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGY 190
V + E + N+++ Y + A ++FD + +N+ +WN+M+ GY
Sbjct: 296 M--VEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGY 353
Query: 191 AKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMV 250
A+CG++ A +F+ M +RD SW+++I GY ++G EA+ +F +M G + N +
Sbjct: 354 AQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFS 413
Query: 251 SVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR 310
S L CA + ALE GK +H +V G + +L+ MY KCG+IEEA +F ++ +
Sbjct: 414 SALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK 473
Query: 311 KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWH 370
D++ WN MI G + HG E +L F+ M+ G+K D+ T H GLV +
Sbjct: 474 --DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ 531
Query: 371 FFESLDK-CGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINH 429
+F ++ + G+ P+S+HYACMVD+L RAG L A+ + MP EP A++ G LL H
Sbjct: 532 YFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVH 591
Query: 430 RNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSS 489
N ELAE K+ +EP++ G Y+ LSN+YA RW D +R M +GVKK PG+S
Sbjct: 592 GNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSW 651
Query: 490 VEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
+EI + F D+ H + +E ++ L + +MK
Sbjct: 652 IEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMK 686
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 131/280 (46%), Gaps = 39/280 (13%)
Query: 56 SALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYL 115
+ + G I + F ++ W +I GYS S + ++L +F++M R G +
Sbjct: 351 TGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRS 410
Query: 116 TYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSV 175
++ A ++ E G +H ++K G+E F+ N+L+ MY CG+I A+ +F +
Sbjct: 411 SFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM 470
Query: 176 QEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFE 235
K++VSWN+M+ GY++ G +A + FESM RE
Sbjct: 471 AGKDIVSWNTMIAGYSRHGFGEVALRFFESMK--------------------RE------ 504
Query: 236 KMRAVGPKANEVTMVSVLCACAHLGALEKGKM-MHKYIVDNGLPLTLVLQTSLVDMYAKC 294
G K ++ TMV+VL AC+H G ++KG+ + D G+ +VD+ +
Sbjct: 505 -----GLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRA 559
Query: 295 GAIEEALLVFHGVSKR---KTDVLIWNAMIGGLATHGSVE 331
G +E+A H + K + D IW ++G HG+ E
Sbjct: 560 GLLEDA----HNLMKNMPFEPDAAIWGTLLGASRVHGNTE 595
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 147/317 (46%), Gaps = 37/317 (11%)
Query: 61 SGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLA--------- 111
+G+ + + + F ++ + WN +I+GY ++N ++ +F M +
Sbjct: 108 NGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGY 167
Query: 112 ----------------PDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSL 155
P+ + A SA + Q + + + K+ + N L
Sbjct: 168 AQNGCVDDARSVFDRMPEKNDVSWNALLSAYV--QNSKMEEACMLFKSRENWALVSWNCL 225
Query: 156 IHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWS 215
+ + IV A + FDS+ +++VSWN+++ GYA+ G++ A ++F+ +DV +W+
Sbjct: 226 LGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWT 285
Query: 216 SLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDN 275
+++ GY++ EA +F+KM P+ NEV+ ++L +E M K + D
Sbjct: 286 AMVSGYIQNRMVEEARELFDKM----PERNEVSWNAMLAGYVQGERME----MAKELFDV 337
Query: 276 GLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLG 335
+ +++ YA+CG I EA +F + KR D + W AMI G + G E+L
Sbjct: 338 MPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR--DPVSWAAMIAGYSQSGHSFEALR 395
Query: 336 LFKDMQAVGIKADEVTY 352
LF M+ G + + ++
Sbjct: 396 LFVQMEREGGRLNRSSF 412
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 111/223 (49%), Gaps = 14/223 (6%)
Query: 153 NSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVR 212
N +I Y G A K+FD + E++LVSWN M+ GY + + A ++FE M ERDV
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158
Query: 213 SWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYI 272
SW++++ GY + G +A +VF++M P+ N+V+ ++L A +E+ M+ K
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRM----PEKNDVSWNALLSAYVQNSKMEEACMLFKSR 214
Query: 273 VDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEE 332
+ LV L+ + K I EA F ++ R DV+ WN +I G A G ++E
Sbjct: 215 EN----WALVSWNCLLGGFVKKKKIVEARQFFDSMNVR--DVVSWNTIITGYAQSGKIDE 268
Query: 333 SLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESL 375
+ LF + D T+ +V+EA F+ +
Sbjct: 269 ARQLFDESPV----QDVFTWTAMVSGYIQNRMVEEARELFDKM 307
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 153/345 (44%), Gaps = 29/345 (8%)
Query: 82 WNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHII 141
WN I Y + ++L +F +M P + + + S L N E + +
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRM------PRWSSVSYNGMISGYLRNGE--FELARKLF 118
Query: 142 KTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHK 201
E D N +I Y N+ A ++F+ + E+++ SWN+ML GYA+ G + A
Sbjct: 119 DEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARS 178
Query: 202 VFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGA 261
VF+ M E++ SW++L+ YV+ + EA +F+ +VS C G
Sbjct: 179 VFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK-------SRENWALVSWNCLLG--GF 229
Query: 262 LEKGKMMH-KYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAM 320
++K K++ + D+ +V +++ YA+ G I+EA +F DV W AM
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFD--ESPVQDVFTWTAM 287
Query: 321 IGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGM 380
+ G + VEE+ LF M + +EV++ G ++ A F+ + C
Sbjct: 288 VSGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVM-PCRN 342
Query: 381 TPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSG 425
+ + M+ A+ G+++ A +MP S A+++G
Sbjct: 343 VST---WNTMITGYAQCGKISEAKNLFDKMPKRDPVS-WAAMIAG 383
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 142/330 (43%), Gaps = 28/330 (8%)
Query: 153 NSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVR 212
N I Y G A +VF + + VS+N M+ GY + GE LA K+F+ M ERD+
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV 127
Query: 213 SWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYI 272
SW+ +I GYV+ +A +FE M P+ + + ++L A G ++ + +
Sbjct: 128 SWNVMIKGYVRNRNLGKARELFEIM----PERDVCSWNTMLSGYAQNGCVDDARS----V 179
Query: 273 VDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEE 332
D V +L+ Y + +EEA ++F S+ ++ WN ++GG + E
Sbjct: 180 FDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK--SRENWALVSWNCLLGGFVKKKKIVE 237
Query: 333 SLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSE--HYACM 390
+ F M D V++ G + EA F+ +P + + M
Sbjct: 238 ARQFFDSMNV----RDVVSWNTIITGYAQSGKIDEARQLFDE------SPVQDVFTWTAM 287
Query: 391 VDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHD 450
V + + A + +MP E A+L+G + E+A ++L ++ P +
Sbjct: 288 VSGYIQNRMVEEARELFDKMP-ERNEVSWNAMLAGYVQGERMEMA----KELFDVMPCRN 342
Query: 451 -GRYIGLSNVYAGVKRWDDARGMREAMERR 479
+ + YA + +A+ + + M +R
Sbjct: 343 VSTWNTMITGYAQCGKISEAKNLFDKMPKR 372
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 127/279 (45%), Gaps = 33/279 (11%)
Query: 177 EKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEK 236
+ ++ WN + Y + G A +VF+ M S++ +I GY++ GE+ A +F++
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 237 MRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGA 296
M P+ + V+ ++ L K + + + + + + +++ YA+ G
Sbjct: 121 M----PERDLVSWNVMIKGYVRNRNLGKARELFEIMPER----DVCSWNTMLSGYAQNGC 172
Query: 297 IEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXX 356
+++A VF + + K DV WNA++ + +EE+ LFK + +
Sbjct: 173 VDDARSVFDRMPE-KNDV-SWNALLSAYVQNSKMEEACMLFKSRE---------NWALVS 221
Query: 357 XXXXHGGLVK-----EAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMP 411
GG VK EA FF+S++ + + ++ A++G++ A Q + P
Sbjct: 222 WNCLLGGFVKKKKIVEARQFFDSMNVRDVVS----WNTIITGYAQSGKIDEARQLFDESP 277
Query: 412 MEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHD 450
++ + A++SG I +R E A R+L + P+ +
Sbjct: 278 VQDVFTWT-AMVSGYIQNRMVEEA----RELFDKMPERN 311
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 269 bits (688), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 184/610 (30%), Positives = 285/610 (46%), Gaps = 119/610 (19%)
Query: 16 TLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISK-VLCFSALSNSGDIDYSY------ 68
+ + +L CK+ ++ Q+H LI +G+ ++ ++ VL F++ D++
Sbjct: 14 STIHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEY 73
Query: 69 ----RAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKAS 124
+F ++ P F+WN +I+ +S+ K+P Q+L + ML +G++ D + + KA
Sbjct: 74 HVCSFSFGEVEDP--FLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKAC 131
Query: 125 ARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMY------------------------- 159
+RL + G+ +H + KTG D F+QN LI +Y
Sbjct: 132 SRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYN 191
Query: 160 ------ASCGNIVWAHKVFD----------------------------------SVQEKN 179
CG IV A ++FD + EK+
Sbjct: 192 SMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKD 251
Query: 180 LVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRA 239
L+SWNSM+DGY K G + A +F+ M RDV +W+++IDGY K G A +F++M
Sbjct: 252 LISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPH 311
Query: 240 VGPKA--------------------------------NEVTMVSVLCACAHLGALEKGKM 267
A ++ T+V VL A A LG L K
Sbjct: 312 RDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAID 371
Query: 268 MHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATH 327
MH YIV+ L L +L+DMY+KCG+I+ A+LVF G+ + D WNAMIGGLA H
Sbjct: 372 MHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDH--WNAMIGGLAIH 429
Query: 328 GSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLD-KCGMTPSSEH 386
G E + + ++ + +K D++T+ H GLVKE FE + K + P +H
Sbjct: 430 GLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQH 489
Query: 387 YACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELE 446
Y CMVD+L+R+G + A I +MP+EP + L+ C +H+ FE E+V + LI
Sbjct: 490 YGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQA 549
Query: 447 PDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAHDKTH 506
+ Y+ LSN+YA W D R +R M+ R ++K PG S +E+ G F
Sbjct: 550 GYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV----- 604
Query: 507 SDSEETYSML 516
DS E S L
Sbjct: 605 -DSIEVSSTL 613
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 269 bits (687), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 165/527 (31%), Positives = 287/527 (54%), Gaps = 49/527 (9%)
Query: 10 IANLNQTLLSLL---DGCKSMLELKQLHAILITSGLSQDEPFISKVL-CFSALSN-SGDI 64
+++ +Q+ SL+ C ++ ++K H++ I GL ++ ISK+L F L N +
Sbjct: 4 VSSFHQSWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHF 63
Query: 65 DYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRH---GLAPDYLTYPFLA 121
Y+ F + P F+++T+IR S S P L FL M++ +AP YLT+ FL
Sbjct: 64 HYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLI 123
Query: 122 KASARLLNQETGVSVHAHIIKTG-HEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNL 180
A + G +H ++K G D +Q ++ +Y V++K L
Sbjct: 124 VACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIY---------------VEDKLL 168
Query: 181 VSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAV 240
+ A KVF+ + + DV W L++GYV+ G E + VF +M
Sbjct: 169 LD----------------ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVK 212
Query: 241 GPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNG-LPLTLVLQTSLVDMYAKCGAIEE 299
G + +E ++ + L ACA +GAL +GK +H+++ + + + T+LVDMYAKCG IE
Sbjct: 213 GLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIET 272
Query: 300 ALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAV-GIKADEVTYXXXXXX 358
A+ VF +++R +V W A+IGG A +G ++++ + ++ GIK D V
Sbjct: 273 AVEVFKKLTRR--NVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAA 330
Query: 359 XXHGGLVKEAWHFFESLD-KCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTAS 417
HGG ++E E+++ + +TP EHY+C+VD++ RAG+L A I +MPM+P AS
Sbjct: 331 CAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLAS 390
Query: 418 MLGALLSGCINHRNFELAEIVGRKLIELEP----DHDGRYIGLSNVYAGVKRWDDARGMR 473
+ GALL+GC H+N EL E+ + L++LE + + + LSN+Y V+R +A +R
Sbjct: 391 VWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVR 450
Query: 474 EAMERRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVA 520
+E+RGV+K+PG+S +E+ G +F++ D +H + + +++++ ++
Sbjct: 451 GMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVIHLLS 497
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 268 bits (686), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 168/519 (32%), Positives = 263/519 (50%), Gaps = 44/519 (8%)
Query: 17 LLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALS-NSGDIDYSYRAFSQLS 75
LLSL+ L L+Q+HA+L+ + L ++ L ALS DI+YS R FSQ
Sbjct: 14 LLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRL 73
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAP-DYLTYPFLAKASARLLNQETGV 134
+P + NT+IR +S S+ P + +F + R+ P + L+ F K + + G+
Sbjct: 74 NPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGL 133
Query: 135 SVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCG 194
+H I G D + +L+ +Y++C N A KVFD + +++ VSWN
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWN---------- 183
Query: 195 EMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMR-----AVGPKANEVTM 249
L Y++ R+ + +F+KM+ V P VT
Sbjct: 184 ---------------------VLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDG--VTC 220
Query: 250 VSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSK 309
+ L ACA+LGAL+ GK +H +I +NGL L L +LV MY++CG++++A VF+G+ +
Sbjct: 221 LLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRE 280
Query: 310 RKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAW 369
R +V+ W A+I GLA +G +E++ F +M GI +E T H GLV E
Sbjct: 281 R--NVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGM 338
Query: 370 HFFESLD--KCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCI 427
FF+ + + + P+ HY C+VD+L RA L AY I M M+P +++ LL C
Sbjct: 339 MFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACR 398
Query: 428 NHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGF 487
H + EL E V LIEL+ + G Y+ L N Y+ V +W+ +R M+ + + PG
Sbjct: 399 VHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGC 458
Query: 488 SSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMKLG 526
S++E+ G FI D +H EE Y ML + Q+K+
Sbjct: 459 SAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIA 497
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 164/527 (31%), Positives = 286/527 (54%), Gaps = 49/527 (9%)
Query: 10 IANLNQTLLSLL---DGCKSMLELKQLHAILITSGLSQDEPFISKVL-CFSALSN-SGDI 64
+++ +Q+ SL+ C ++ ++K H++ I GL ++ ISK+L F L N +
Sbjct: 4 VSSFHQSWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHF 63
Query: 65 DYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRH---GLAPDYLTYPFLA 121
Y+ F + P F+++T+IR S S P L FL M++ + P YLT+ FL
Sbjct: 64 HYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLI 123
Query: 122 KASARLLNQETGVSVHAHIIKTG-HEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNL 180
A + G +H ++K G D +Q ++ +Y V++K L
Sbjct: 124 VACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIY---------------VEDKLL 168
Query: 181 VSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAV 240
A KVF+ + + DV W L++GYV+ G E + VF++M
Sbjct: 169 FD----------------ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVR 212
Query: 241 GPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNG-LPLTLVLQTSLVDMYAKCGAIEE 299
G + +E ++ + L ACA +GAL +GK +H+++ + + + T+LVDMYAKCG IE
Sbjct: 213 GIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIET 272
Query: 300 ALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAV-GIKADEVTYXXXXXX 358
A+ VF +++R +V W A+IGG A +G +++ ++ GIK D V
Sbjct: 273 AVEVFEKLTRR--NVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAA 330
Query: 359 XXHGGLVKEAWHFFESLD-KCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTAS 417
HGG ++E E+++ + G+TP EHY+C+VD++ RAG+L A I +MPM+P AS
Sbjct: 331 CAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLAS 390
Query: 418 MLGALLSGCINHRNFELAEIVGRKLIELEP----DHDGRYIGLSNVYAGVKRWDDARGMR 473
+ GALL+GC H+N EL E+ + L++LE + + + LSN+Y V+R +A +R
Sbjct: 391 VWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVR 450
Query: 474 EAMERRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVA 520
+E+RG++K+PG+S +E+ G+ +F++ D +H + + +++++ ++
Sbjct: 451 GMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIHLLS 497
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 169/515 (32%), Positives = 269/515 (52%), Gaps = 39/515 (7%)
Query: 16 TLLSLLDGCKSMLELKQ---LHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
T++SLL C + + +H+ I GL + E F+S L + G + + F
Sbjct: 249 TVVSLLSACTEAGDFNRGVTIHSYSIKHGL-ESELFVSNKL-IDLYAEFGRLRDCQKVFD 306
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
++ + WN+II+ Y ++ P++++S+F +M + PD LT LA ++L +
Sbjct: 307 RMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRA 366
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
SV ++ G F+++ I N+++ YAK
Sbjct: 367 CRSVQGFTLRKGW----FLEDITIG--------------------------NAVVVMYAK 396
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGP-KANEVTMVS 251
G + A VF + DV SW+++I GY + G EA+ ++ M G AN+ T VS
Sbjct: 397 LGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVS 456
Query: 252 VLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRK 311
VL AC+ GAL +G +H ++ NGL L + + TSL DMY KCG +E+AL +F+ + +
Sbjct: 457 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR-- 514
Query: 312 TDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHF 371
+ + WN +I HG E+++ LFK+M G+K D +T+ H GLV E
Sbjct: 515 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWC 574
Query: 372 FESLDK-CGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHR 430
FE + G+TPS +HY CMVD+ RAGQL TA +FI M ++P AS+ GALLS C H
Sbjct: 575 FEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHG 634
Query: 431 NFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSV 490
N +L +I L E+EP+H G ++ LSN+YA +W+ +R +G++K+PG+SS+
Sbjct: 635 NVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSM 694
Query: 491 EICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMKL 525
E+ F ++TH EE Y L + ++K+
Sbjct: 695 EVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKM 729
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 161/337 (47%), Gaps = 49/337 (14%)
Query: 19 SLLDGCKSMLELKQLHAILITSGLSQDEPFISKVL---CFSALSNSGDIDYSYRAFSQLS 75
+L C ++ K LHA L+ S Q+ +K++ C+ G++ + F +
Sbjct: 59 TLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYL-----GNVALARHTFDHIQ 113
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIF-LKMLRHGLAPDYLTYPFLAKASARLLNQETGV 134
+ ++ WN +I GY + N + + F L ML GL PDY T+P + KA +++ G
Sbjct: 114 NRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GN 170
Query: 135 SVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCG 194
+H +K G +D ++ SLIH+Y+ + A +FD + +++ SWN+M+ GY
Sbjct: 171 KIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYC--- 227
Query: 195 EMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLC 254
++G +EA+ + +RA+ + VT+VS+L
Sbjct: 228 ----------------------------QSGNAKEALTLSNGLRAM----DSVTVVSLLS 255
Query: 255 ACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDV 314
AC G +G +H Y + +GL L + L+D+YA+ G + + VF + R D+
Sbjct: 256 ACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR--DL 313
Query: 315 LIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVT 351
+ WN++I + ++ LF++M+ I+ D +T
Sbjct: 314 ISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLT 350
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 209/453 (46%), Gaps = 54/453 (11%)
Query: 3 GVSPSFKIANLNQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSG 62
G++P ++ T S+L C+++++ ++H + + G D + ++ S
Sbjct: 148 GLTPDYR------TFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLI--HLYSRYK 199
Query: 63 DIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGL-APDYLTYPFLA 121
+ + F ++ + WN +I GY S N ++L+ L +GL A D +T L
Sbjct: 200 AVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT-----LSNGLRAMDSVTVVSLL 254
Query: 122 KASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLV 181
A + GV++H++ IK G E + F+ N LI +YA G + KVFD + ++L+
Sbjct: 255 SACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLI 314
Query: 182 SWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVG 241
SWNS++ Y ++E+ +R A+++F++MR
Sbjct: 315 SWNSIIKAY--------------ELNEQPLR-----------------AISLFQEMRLSR 343
Query: 242 PKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPL-TLVLQTSLVDMYAKCGAIEEA 300
+ + +T++S+ + LG + + + + + G L + + ++V MYAK G ++ A
Sbjct: 344 IQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSA 403
Query: 301 LLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVG-IKADEVTYXXXXXXX 359
VF+ + TDV+ WN +I G A +G E++ ++ M+ G I A++ T+
Sbjct: 404 RAVFNWLP--NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPAC 461
Query: 360 XHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASML 419
G +++ L K G+ + D+ + G+L A Q+P S+
Sbjct: 462 SQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR--VNSVP 519
Query: 420 GALLSGCIN-HRNFELAEIVGRKLIE--LEPDH 449
L C H + E A ++ +++++ ++PDH
Sbjct: 520 WNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDH 552
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 174/559 (31%), Positives = 270/559 (48%), Gaps = 93/559 (16%)
Query: 14 NQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGD-------IDY 66
LL L+ C S+ KQ+ LIT L +D+ I+KV+ F L S D I +
Sbjct: 6 KSVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTF--LGKSADFASYSSVILH 63
Query: 67 SYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASAR 126
S R S LSS F +NT++ Y+ P ++ + + +G +PD T+P + KA +
Sbjct: 64 SIR--SVLSS---FSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGK 118
Query: 127 LLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSM 186
G +H + K G D ++QNSL+H Y CG A KVF + +++VSW +
Sbjct: 119 FSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGI 178
Query: 187 LDGYAKCGEMVLAHKVFESMSERDV----------------------------------- 211
+ G+ + G L + ++ S+ DV
Sbjct: 179 ITGFTRTG---LYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRAS 235
Query: 212 ----RSWSSLIDGYVKAGEYREAMAVFEKMR----------------------------- 238
+ ++LID YVK + +AM VF ++
Sbjct: 236 LISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSL 295
Query: 239 ---AVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCG 295
+ G K + + SVL ACA LGA++ G+ +H+YI+ G+ + T++VDMYAKCG
Sbjct: 296 MQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCG 355
Query: 296 AIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXX 355
IE AL +F+G+ R +V WNA++GGLA HG ESL F++M +G K + VT+
Sbjct: 356 YIETALEIFNGI--RSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAA 413
Query: 356 XXXXXHGGLVKEAWHFFESLD--KCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPME 413
H GLV E +F + + + P EHY CM+D+L RAG L A + + MP++
Sbjct: 414 LNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVK 473
Query: 414 PTASMLGALLSGCINHRNF-ELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGM 472
P + GA+LS C N EL + + +++E + G Y+ LSN++A +RWDD +
Sbjct: 474 PDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARI 533
Query: 473 REAMERRGVKKSPGFSSVE 491
R M+ +G+ K PG S +E
Sbjct: 534 RRLMKVKGISKVPGSSYIE 552
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 151/493 (30%), Positives = 263/493 (53%), Gaps = 40/493 (8%)
Query: 29 ELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRG 88
+L+Q+HA LI +G + ++K++ + + + I Y++ F + P F++N++I+
Sbjct: 24 QLQQVHAHLIVTGYGRSRSLLTKLITLACSARA--IAYTHLLFLSVPLPDDFLFNSVIKS 81
Query: 89 YSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYD 148
S + P+ ++ + +ML ++P T+ + K+ A L G VH H + +G D
Sbjct: 82 TSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLD 141
Query: 149 RFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSE 208
++Q +L+ Y+ KCG+M A +VF+ M E
Sbjct: 142 TYVQAALVTFYS-------------------------------KCGDMEGARQVFDRMPE 170
Query: 209 RDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMM 268
+ + +W+SL+ G+ + G EA+ VF +MR G + + T VS+L ACA GA+ G +
Sbjct: 171 KSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWV 230
Query: 269 HKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHG 328
H+YI+ GL L + L T+L+++Y++CG + +A VF + ++T+V W AMI THG
Sbjct: 231 HQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKM--KETNVAAWTAMISAYGTHG 288
Query: 329 SVEESLGLFKDMQ-AVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKC-GMTPSSEH 386
++++ LF M+ G + VT+ H GLV+E ++ + K + P EH
Sbjct: 289 YGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEH 348
Query: 387 YACMVDVLARAGQLATAYQFICQMPMEPTAS---MLGALLSGCINHRNFELAEIVGRKLI 443
+ CMVD+L RAG L AY+FI Q+ A+ + A+L C HRN++L + ++LI
Sbjct: 349 HVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLI 408
Query: 444 ELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAHD 503
LEPD+ G ++ LSN+YA + D+ +R+ M R ++K G+S +E+ + F D
Sbjct: 409 ALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGD 468
Query: 504 KTHSDSEETYSML 516
++H ++ E Y L
Sbjct: 469 ESHQETGEIYRYL 481
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 160/347 (46%), Gaps = 46/347 (13%)
Query: 4 VSPSFKIANLNQTLLSLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSALSN 60
VSPS N T S++ C + L K +H + SG D + ++ F S
Sbjct: 103 VSPS------NYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTF--YSK 154
Query: 61 SGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFL 120
GD++ + + F ++ I WN+++ G+ + +++ +F +M G PD T+ L
Sbjct: 155 CGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSL 214
Query: 121 AKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNL 180
A A+ G VH +II G + + + +LI++Y+ CG++ A +VFD ++E N+
Sbjct: 215 LSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNV 274
Query: 181 VSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMR-A 239
+W +M+ Y G ++A+ +F KM
Sbjct: 275 AAWTAMISAYG-------------------------------THGYGQQAVELFNKMEDD 303
Query: 240 VGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDN-GLPLTLVLQTSLVDMYAKCGAIE 298
GP N VT V+VL ACAH G +E+G+ ++K + + L + +VDM + G ++
Sbjct: 304 CGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLD 363
Query: 299 EALLVFHGV--SKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAV 343
EA H + + + T +W AM+G H + + + + K + A+
Sbjct: 364 EAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIAL 410
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 152/435 (34%), Positives = 246/435 (56%), Gaps = 3/435 (0%)
Query: 59 SNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYP 118
S +G I+ + F Q++ I W T+I G ++L + +MLR G+ P +
Sbjct: 250 SKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMV 309
Query: 119 FLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK 178
L ASAR + G+ +H I+K G + F+Q ++IH YA +I A + F++ +
Sbjct: 310 DLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKD 369
Query: 179 NLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMR 238
++ S N+++ G+ K G + A +VF+ ++D+ SW+++I GY ++ + A+ +F +M
Sbjct: 370 HIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMI 429
Query: 239 AVGP-KANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAI 297
+ K + +TMVSV A + LG+LE+GK H Y+ + +P L +++DMYAKCG+I
Sbjct: 430 SSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSI 489
Query: 298 EEALLVFHGVSKRKTDVLI-WNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXX 356
E AL +FH + + WNA+I G ATHG + +L L+ D+Q++ IK + +T+
Sbjct: 490 ETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVL 549
Query: 357 XXXXHGGLVKEAWHFFESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPT 415
H GLV+ +FES+ G+ P +HY CMVD+L +AG+L A + I +MP++
Sbjct: 550 SACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKAD 609
Query: 416 ASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREA 475
+ G LLS H N E+AE+ +L ++P H G + LSNVYA RW+D +RE
Sbjct: 610 VMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREE 669
Query: 476 MERRGVKKSPGFSSV 490
M R V+ S FS V
Sbjct: 670 MRTRDVEWSRAFSGV 684
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 123/491 (25%), Positives = 216/491 (43%), Gaps = 68/491 (13%)
Query: 11 ANLNQTLLSLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVL-CFSALSNSGDIDY 66
++ + L+S L C S ++ +Q+H ++ SGL + + VL ++ D +
Sbjct: 38 SDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAES 97
Query: 67 SYRAFSQLSSPRIFI----------------------------WNTIIRGYSNSKNPIQS 98
+R ++L S I + T+I+GY+ + ++
Sbjct: 98 VFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEA 157
Query: 99 LSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHM 158
+ +F +M G+ + +T + A + L + + IK E F+ +L+HM
Sbjct: 158 MELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHM 217
Query: 159 YASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLI 218
Y C + A K+FD + E+NLV+WN ML+GY+K G + A ++F+ ++E+D+ SW ++I
Sbjct: 218 YCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMI 277
Query: 219 DGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLP 278
DG ++ + EA+ + +M G K +EV MV +L A A KG +H IV G
Sbjct: 278 DGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFD 337
Query: 279 LTLVLQTSLVDMYA-------------------------------KCGAIEEALLVFHGV 307
LQ +++ YA K G +E+A VF
Sbjct: 338 CYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQT 397
Query: 308 SKRKTDVLIWNAMIGGLATHGSVEESLGLFKDM-QAVGIKADEVTYXXXXXXXXHGGLVK 366
+ D+ WNAMI G A S + +L LF++M + +K D +T G ++
Sbjct: 398 HDK--DIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLE 455
Query: 367 EAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMP--MEPTASMLGALLS 424
E + L+ + P+ A ++D+ A+ G + TA Q T S A++
Sbjct: 456 EGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIIC 515
Query: 425 GCINHRNFELA 435
G H + +LA
Sbjct: 516 GSATHGHAKLA 526
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 164/332 (49%), Gaps = 23/332 (6%)
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G +H ++K+G + + +I NS+++MYA C + A VF + + S+N M+DGY +
Sbjct: 60 GRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVR 119
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
+ A K+F+ M ER S+++LI GY + ++ EAM +F +MR +G NEVT+ +V
Sbjct: 120 SRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATV 179
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT 312
+ AC+HLG + +M+ + L + + T+L+ MY C +++A +F + +R
Sbjct: 180 ISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPER-- 237
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFF 372
+++ WN M+ G + G +E++ LF + + D V++ + EA ++
Sbjct: 238 NLVTWNVMLNGYSKAGLIEQAEELFDQIT----EKDIVSWGTMIDGCLRKNQLDEALVYY 293
Query: 373 ESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNF 432
+ +CGM PS MVD+L+ + + S G L G I R F
Sbjct: 294 TEMLRCGMKPSE---VMMVDLLSASAR--------------SVGSSKGLQLHGTIVKRGF 336
Query: 433 ELAEIVGRKLIELEPDHDGRYIGLSNVYAGVK 464
+ + + +I + + L A VK
Sbjct: 337 DCYDFLQATIIHFYAVSNDIKLALQQFEASVK 368
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 157/505 (31%), Positives = 264/505 (52%), Gaps = 9/505 (1%)
Query: 17 LLSLLDGCKSMLE---LKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQ 73
+L L GC +Q+H +I G D F+ + + + +I+ + + F +
Sbjct: 135 VLKALSGCDDFWLGSLARQVHGFVIRGGFDSD-VFVGNGM-ITYYTKCDNIESARKVFDE 192
Query: 74 LSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLR-HGLAPDYLTYPFLAKASARLLNQET 132
+S + WN++I GYS S + ++ ML P+ +T + +A + +
Sbjct: 193 MSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIF 252
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G+ VH +I+ + D + N++I YA CG++ +A +FD + EK+ V++ +++ GY
Sbjct: 253 GLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMA 312
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
G + A +F M + +W+++I G ++ + E + F +M G + N VT+ S+
Sbjct: 313 HGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSL 372
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT 312
L + + L+ GK +H + + NG + + TS++D YAK G + A VF R
Sbjct: 373 LPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRS- 431
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFF 372
++ W A+I A HG + + LF MQ +G K D+VT H G A H F
Sbjct: 432 -LIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIF 490
Query: 373 ES-LDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRN 431
+S L K + P EHYACMV VL+RAG+L+ A +FI +MP++P A + GALL+G +
Sbjct: 491 DSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGD 550
Query: 432 FELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVE 491
E+A +L E+EP++ G Y ++N+Y RW++A +R M+R G+KK PG S +E
Sbjct: 551 LEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIE 610
Query: 492 ICGVSRRFIAHDKTHSDSEETYSML 516
R FIA D + S+E Y ++
Sbjct: 611 TEKGLRSFIAKDSSCERSKEMYEII 635
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 256/517 (49%), Gaps = 42/517 (8%)
Query: 16 TLLSLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
+L + C +L L K++H + G DE S ++ ++ + F
Sbjct: 210 SLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALV--DMYGKCDCLEVAREVFQ 267
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
++ + WN++I+GY + + I +M+ G P T + A +R N
Sbjct: 268 KMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLH 327
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G +H ++I++ D +Y +C S++D Y K
Sbjct: 328 GKFIHGYVIRSVVNAD---------IYVNC----------------------SLIDLYFK 356
Query: 193 CGEMVLAHKVFESMSERDV-RSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVS 251
CGE LA VF S +++DV SW+ +I Y+ G + +A+ V+++M +VG K + VT S
Sbjct: 357 CGEANLAETVF-SKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTS 415
Query: 252 VLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRK 311
VL AC+ L ALEKGK +H I ++ L +L ++L+DMY+KCG +EA +F+ + K+
Sbjct: 416 VLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKK- 474
Query: 312 TDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHF 371
DV+ W MI +HG E+L F +MQ G+K D VT H GL+ E F
Sbjct: 475 -DVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKF 533
Query: 372 FESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMP-MEPTASMLGALLSGCINH 429
F + K G+ P EHY+CM+D+L RAG+L AY+ I Q P A +L L S C H
Sbjct: 534 FSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLH 593
Query: 430 RNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSS 489
L + + R L+E PD Y+ L N+YA + WD AR +R M+ G++K PG S
Sbjct: 594 LEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSW 653
Query: 490 VEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMKLG 526
+E+ F A D++H +E Y L ++ M+ G
Sbjct: 654 IEMSDKVCHFFAEDRSHLRAENVYECLALLSGHMESG 690
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 168/344 (48%), Gaps = 47/344 (13%)
Query: 17 LLSLLDGC----KSMLELKQLHAILITSGLSQDEPFISKVLCFSALS---NSGDIDYSYR 69
LLSLL C KS+ +K +H ++T GL +D VLC S ++ D +
Sbjct: 6 LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRD-----VVLCKSLINVYFTCKDHCSARH 60
Query: 70 AFSQLS-SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLA-PDYLTYPFLAKASARL 127
F ++IWN+++ GYS + +L +F ++L + PD T+P + KA L
Sbjct: 61 VFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGAL 120
Query: 128 LNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSML 187
+ G +H ++K+G+ D + +SL+ MYA +F+ NS+
Sbjct: 121 GREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAK-------FNLFE----------NSL- 162
Query: 188 DGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEV 247
+VF+ M ERDV SW+++I + ++GE +A+ +F +M + G + N V
Sbjct: 163 -------------QVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSV 209
Query: 248 TMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGV 307
++ + AC+ L LE+GK +H+ V G L + ++LVDMY KC +E A VF +
Sbjct: 210 SLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKM 269
Query: 308 SKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVT 351
++ ++ WN+MI G G + + + M G + + T
Sbjct: 270 PRK--SLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTT 311
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 124/270 (45%), Gaps = 6/270 (2%)
Query: 178 KNLVSWNSMLDGYAKCGEMVLAHKVFESMSER-DVRSWSSLIDGYVKAGEYREAMAVFEK 236
+++V S+++ Y C + A VFE+ R DV W+SL+ GY K + + + VF++
Sbjct: 37 RDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKR 96
Query: 237 MRAVG-PKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCG 295
+ + T +V+ A LG G+M+H +V +G +V+ +SLV MYAK
Sbjct: 97 LLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFN 156
Query: 296 AIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXX 355
E +L VF + +R DV WN +I G E++L LF M++ G + + V+
Sbjct: 157 LFENSLQVFDEMPER--DVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVA 214
Query: 356 XXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPT 415
++ K G + +VD+ + L A + +MP +
Sbjct: 215 ISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSL 274
Query: 416 ASMLGALLSGCINHRNFE-LAEIVGRKLIE 444
+ +++ G + + + EI+ R +IE
Sbjct: 275 VAW-NSMIKGYVAKGDSKSCVEILNRMIIE 303
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 170/526 (32%), Positives = 266/526 (50%), Gaps = 30/526 (5%)
Query: 14 NQTLLSLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRA 70
N TL+++L C S+ KQLH +TS + Q+ F+ L + G +D +
Sbjct: 229 NITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNM-FVGNCL-VDMYAKCGMMDEANTV 286
Query: 71 FSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQ 130
FS +S + WN ++ GYS ++ +F KM + D +T+ A+
Sbjct: 287 FSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLG 346
Query: 131 ETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVF------------DSVQEK 178
+ V ++ +G + + S++ AS G ++ ++ + ++
Sbjct: 347 YEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDE 406
Query: 179 NLVSWNSMLDGYAKCGEMVLAHKVFESMS--ERDVRSWSSLIDGYVKAGEYREAMAVFEK 236
N+V N ++D YAKC ++ A +F+S+S ERDV +W+ +I GY + G+ +A+ + +
Sbjct: 407 NMVI-NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSE 465
Query: 237 M--RAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIV---DNGLPLTLVLQTSLVDMY 291
M + N T+ L ACA L AL GK +H Y + N +PL + L+DMY
Sbjct: 466 MFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPL--FVSNCLIDMY 523
Query: 292 AKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVT 351
AKCG+I +A LVF + + + W +++ G HG EE+LG+F +M+ +G K D VT
Sbjct: 524 AKCGSISDARLVFDNMMAKNE--VTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVT 581
Query: 352 YXXXXXXXXHGGLVKEAWHFFESLDKC-GMTPSSEHYACMVDVLARAGQLATAYQFICQM 410
H G++ + +F + G++P EHYAC+VD+L RAG+L A + I +M
Sbjct: 582 LLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEM 641
Query: 411 PMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDAR 470
PMEP + A LS C H EL E K+ EL +HDG Y LSN+YA RW D
Sbjct: 642 PMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVT 701
Query: 471 GMREAMERRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSML 516
+R M +GVKK PG S VE + F DKTH ++E Y +L
Sbjct: 702 RIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVL 747
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/323 (34%), Positives = 170/323 (52%), Gaps = 22/323 (6%)
Query: 34 HAILITSGLSQDEPFISKVLCFSAL----SNSGDIDYSYRAFSQLSSPRIFIWNTIIRGY 89
HA+ + +G FIS V +AL S + + + F ++S + WN+II Y
Sbjct: 150 HALSLVTG------FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESY 203
Query: 90 SNSKNPIQSLSIFLKMLRH-GLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYD 148
+ P +L +F +M G PD +T + A L G +H + + +
Sbjct: 204 AKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQN 263
Query: 149 RFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSE 208
F+ N L+ MYA CG + A+ VF ++ K++VSWN+M+ GY++ G A ++FE M E
Sbjct: 264 MFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQE 323
Query: 209 R----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEK 264
DV +WS+ I GY + G EA+ V +M + G K NEVT++SVL CA +GAL
Sbjct: 324 EKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMH 383
Query: 265 GKMMH----KYIVD---NGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIW 317
GK +H KY +D NG ++ L+DMYAKC ++ A +F +S ++ DV+ W
Sbjct: 384 GKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTW 443
Query: 318 NAMIGGLATHGSVEESLGLFKDM 340
MIGG + HG ++L L +M
Sbjct: 444 TVMIGGYSQHGDANKALELLSEM 466
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 191/410 (46%), Gaps = 51/410 (12%)
Query: 2 PGVSPSFKIANLNQTLLSLLDGCKSMLELKQLHAILITSG---LSQDEPFISKVLCFSAL 58
P ++P F + CK++ ++K +H L++ G L+ IS + L
Sbjct: 28 PEITPPF------------IHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCL 75
Query: 59 SNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYP 118
S++ + R F S ++ WN++IR Y ++ + L +F M PD T+P
Sbjct: 76 SHAVSL---LRRFPP-SDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFP 131
Query: 119 FLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK 178
F+ KA + + G S HA + TG + F+ N+L+ MY+ C ++ A KVFD +
Sbjct: 132 FVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVW 191
Query: 179 NLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMR 238
++VSWNS+++ YAK G+ +A ++F M+
Sbjct: 192 DVVSWNSIIESYAKLGKPKVALEMFSRMTNE----------------------------- 222
Query: 239 AVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIE 298
G + + +T+V+VL CA LG GK +H + V + + + + LVDMYAKCG ++
Sbjct: 223 -FGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMD 281
Query: 299 EALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXX 358
EA VF +S + DV+ WNAM+ G + G E+++ LF+ MQ IK D VT+
Sbjct: 282 EANTVFSNMSVK--DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISG 339
Query: 359 XXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFIC 408
GL EA + G+ P+ ++ A G L + C
Sbjct: 340 YAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 389
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 103/241 (42%), Gaps = 8/241 (3%)
Query: 207 SERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGK 266
S+ V W+SLI Y G + + +F M ++ + T V AC + ++ G+
Sbjct: 88 SDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGE 147
Query: 267 MMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLAT 326
H + G + + +LV MY++C ++ +A VF +S DV+ WN++I A
Sbjct: 148 SAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMS--VWDVVSWNSIIESYAK 205
Query: 327 HGSVEESLGLFKDM-QAVGIKADEVTYXXXXXXXXHGGL--VKEAWHFFESLDKCGMTPS 383
G + +L +F M G + D +T G + + H F + M +
Sbjct: 206 LGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSE--MIQN 263
Query: 384 SEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLI 443
C+VD+ A+ G + A M ++ S A+++G FE A + K+
Sbjct: 264 MFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVS-WNAMVAGYSQIGRFEDAVRLFEKMQ 322
Query: 444 E 444
E
Sbjct: 323 E 323
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 144/448 (32%), Positives = 239/448 (53%), Gaps = 4/448 (0%)
Query: 78 RIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVH 137
++ +N +I GY N ++L + +M+ G+ D TYP + +A A + G VH
Sbjct: 250 KLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVH 309
Query: 138 AHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMV 197
A++++ ++ NSL+ +Y CG A +F+ + K+LVSWN++L GY G +
Sbjct: 310 AYVLRR-EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIG 368
Query: 198 LAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACA 257
A +F+ M E+++ SW +I G + G E + +F M+ G + + + +CA
Sbjct: 369 EAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCA 428
Query: 258 HLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIW 317
LGA G+ H ++ G +L +L+ MYAKCG +EEA VF + D + W
Sbjct: 429 VLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC--LDSVSW 486
Query: 318 NAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDK 377
NA+I L HG E++ ++++M GI+ D +T H GLV + +F+S++
Sbjct: 487 NALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMET 546
Query: 378 C-GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAE 436
+ P ++HYA ++D+L R+G+ + A I +P +PTA + ALLSGC H N EL
Sbjct: 547 VYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGI 606
Query: 437 IVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVS 496
I KL L P+HDG Y+ LSN++A +W++ +R+ M RGVKK S +E+
Sbjct: 607 IAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQV 666
Query: 497 RRFIAHDKTHSDSEETYSMLNFVAYQMK 524
F+ D +H ++E Y L + +M+
Sbjct: 667 HTFLVDDTSHPEAEAVYIYLQDLGKEMR 694
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 181/370 (48%), Gaps = 15/370 (4%)
Query: 49 ISKVLCFSALSNSGDIDYSYRAFSQ--LSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKML 106
I++ S SGDI + F + + ++N +I G+S++ + ++++F KM
Sbjct: 81 IARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMK 140
Query: 107 RHGLAPDYLTYPFLAKASARLLNQETG-VSVHAHIIKTGHEYDRFIQNSLIHMYASCGN- 164
G PD T+ + A + + E V HA +K+G Y + N+L+ +Y+ C +
Sbjct: 141 HEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASS 200
Query: 165 ---IVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSER-DVRSWSSLIDG 220
+ A KVFD + EK+ SW +M+ GY K G L ++ E M + + +++++I G
Sbjct: 201 PSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISG 260
Query: 221 YVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLT 280
YV G Y+EA+ + +M + G + +E T SV+ ACA G L+ GK +H Y++ +
Sbjct: 261 YVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFS 319
Query: 281 LVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDM 340
SLV +Y KCG +EA +F + + D++ WNA++ G + G + E+ +FK+M
Sbjct: 320 FHFDNSLVSLYYKCGKFDEARAIFEKMPAK--DLVSWNALLSGYVSSGHIGEAKLIFKEM 377
Query: 341 QAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQL 400
+ I +++ G +E F + + G P ++ + A G
Sbjct: 378 KEKNI----LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAY 433
Query: 401 ATAYQFICQM 410
Q+ Q+
Sbjct: 434 CNGQQYHAQL 443
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 151/348 (43%), Gaps = 41/348 (11%)
Query: 135 SVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCG 194
+VH +II G + I N LI +Y + +A ++FD + E + ++ +M+ GY G
Sbjct: 35 AVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASG 94
Query: 195 EMVLAHKVFES--MSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
++ LA VFE + RD ++++I G+ + A+ +F KM+ G K + T SV
Sbjct: 95 DITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASV 154
Query: 253 LCACAHLGALEKGKM-MHKYIVDNGLPLTLVLQTSLVDMYAKCGA----IEEALLVFHGV 307
L A + EK + H + +G + +LV +Y+KC + + A VF +
Sbjct: 155 LAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEI 214
Query: 308 SKR------------------------------KTDVLIWNAMIGGLATHGSVEESLGLF 337
++ ++ +NAMI G G +E+L +
Sbjct: 215 LEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMV 274
Query: 338 KDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHY-ACMVDVLAR 396
+ M + GI+ DE TY GL++ + + S H+ +V + +
Sbjct: 275 RRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR--REDFSFHFDNSLVSLYYK 332
Query: 397 AGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIE 444
G+ A +MP + S ALLSG ++ + A+++ +++ E
Sbjct: 333 CGKFDEARAIFEKMPAKDLVSW-NALLSGYVSSGHIGEAKLIFKEMKE 379
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 169/516 (32%), Positives = 268/516 (51%), Gaps = 43/516 (8%)
Query: 17 LLSLLDGCKSML-ELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLS 75
LL L G +S L + ++H ++ +G QD PF++ L S+ G +DY+ + F +
Sbjct: 82 LLILCCGHRSSLSDALRVHRHILDNGSDQD-PFLATKL-IGMYSDLGSVDYARKVFDKTR 139
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKA---SARLLNQ-E 131
I++WN + R + + + + L ++ KM R G+ D TY ++ KA S +N
Sbjct: 140 KRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLM 199
Query: 132 TGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYA 191
G +HAH+ + G+ +I +L+ MYA G + +A V
Sbjct: 200 KGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYV-------------------- 239
Query: 192 KCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKM--RAVGPKANEVTM 249
F M R+V SWS++I Y K G+ EA+ F +M N VTM
Sbjct: 240 -----------FGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTM 288
Query: 250 VSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSK 309
VSVL ACA L ALE+GK++H YI+ GL L + ++LV MY +CG +E VF +
Sbjct: 289 VSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHD 348
Query: 310 RKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAW 369
R DV+ WN++I HG ++++ +F++M A G VT+ H GLV+E
Sbjct: 349 R--DVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGK 406
Query: 370 HFFESLDK-CGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCIN 428
FE++ + G+ P EHYACMVD+L RA +L A + + M EP + G+LL C
Sbjct: 407 RLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRI 466
Query: 429 HRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFS 488
H N ELAE R+L LEP + G Y+ L+++YA + WD+ + +++ +E RG++K PG
Sbjct: 467 HGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRC 526
Query: 489 SVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
+E+ F++ D+ + E+ ++ L +A MK
Sbjct: 527 WMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMK 562
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 160/527 (30%), Positives = 269/527 (51%), Gaps = 53/527 (10%)
Query: 16 TLLSLLDGCKSMLEL----KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAF 71
T+ S+L C S LE+ K+LHA + +G + F+ L N + R F
Sbjct: 304 TISSVLPAC-SHLEMLRTGKELHAYALKNGSLDENSFVGSAL-VDMYCNCKQVLSGRRVF 361
Query: 72 SQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRH-GLAPDYLTYPFLAKASARLLNQ 130
+ +I +WN +I GYS +++ ++L +F+ M GL + T + A R
Sbjct: 362 DGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF 421
Query: 131 ETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGY 190
++H ++K G + DRF+QN+L+ MY+
Sbjct: 422 SRKEAIHGFVVKRGLDRDRFVQNTLMDMYS------------------------------ 451
Query: 191 AKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMR-----------A 239
+ G++ +A ++F M +RD+ +W+++I GYV + + +A+ + KM+
Sbjct: 452 -RLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASR 510
Query: 240 VGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEE 299
V K N +T++++L +CA L AL KGK +H Y + N L + + ++LVDMYAKCG ++
Sbjct: 511 VSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQM 570
Query: 300 ALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXX 359
+ VF + ++ +V+ WN +I HG+ +E++ L + M G+K +EVT+
Sbjct: 571 SRKVFDQIPQK--NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAAC 628
Query: 360 XHGGLVKEAWHFFESLD-KCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPME-PTAS 417
H G+V E F + G+ PSS+HYAC+VD+L RAG++ AYQ + MP + A
Sbjct: 629 SHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAG 688
Query: 418 MLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAME 477
+LL H N E+ EI + LI+LEP+ Y+ L+N+Y+ WD A +R M+
Sbjct: 689 AWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMK 748
Query: 478 RRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
+GV+K PG S +E +F+A D +H SE+ L + +M+
Sbjct: 749 EQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMR 795
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 168/387 (43%), Gaps = 44/387 (11%)
Query: 31 KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYS 90
KQ+HA + G D ++ L + GD Y+ F ++S WN++I
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTL-VNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 175
Query: 91 NSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQE---TGVSVHAHIIKTGHEY 147
+ + +L F ML + P T + A + L E G VHA+ ++ G E
Sbjct: 176 SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-EL 234
Query: 148 DRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMS 207
+ FI N+L+ MY K G++ + + S
Sbjct: 235 NSFIINTLVAMYG-------------------------------KLGKLASSKVLLGSFG 263
Query: 208 ERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKM 267
RD+ +W++++ + + EA+ +M G + +E T+ SVL AC+HL L GK
Sbjct: 264 GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKE 323
Query: 268 MHKYIVDNG-LPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLAT 326
+H Y + NG L + ++LVDMY C + VF G+ RK + +WNAMI G +
Sbjct: 324 LHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRK--IGLWNAMIAGYSQ 381
Query: 327 HGSVEESLGLFKDM-QAVGIKADEVTYXXXXXXXXHGGLV--KEAWHFFESLDKCGMTPS 383
+ +E+L LF M ++ G+ A+ T G KEA H F + K G+
Sbjct: 382 NEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGF--VVKRGLDRD 439
Query: 384 SEHYACMVDVLARAGQLATAYQFICQM 410
++D+ +R G++ A + +M
Sbjct: 440 RFVQNTLMDMYSRLGKIDIAMRIFGKM 466
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 146/322 (45%), Gaps = 50/322 (15%)
Query: 47 PFISKVLCFSA-----LSNSGDIDYSYRAFSQLS-SPRIFI--------WNTIIRGYSNS 92
PF S++L FS L + + S +S +P IFI W ++R S
Sbjct: 16 PFPSQLLPFSRHKHPYLLRATPTSATEDVASAVSGAPSIFISQSRSPEWWIDLLRSKVRS 75
Query: 93 KNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQ 152
+++ ++ M+ G+ PD +P L KA A L + E G +HAH+ K G+ D
Sbjct: 76 NLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVD---- 131
Query: 153 NSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVR 212
++ N++++ Y KCG+ +KVF+ +SER+
Sbjct: 132 --------------------------SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQV 165
Query: 213 SWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLG---ALEKGKMMH 269
SW+SLI ++ A+ F M + + T+VSV+ AC++L L GK +H
Sbjct: 166 SWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVH 225
Query: 270 KYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGS 329
Y + G + ++ T LV MY K G + + ++ R D++ WN ++ L +
Sbjct: 226 AYGLRKGELNSFIINT-LVAMYGKLGKLASSKVLLGSFGGR--DLVTWNTVLSSLCQNEQ 282
Query: 330 VEESLGLFKDMQAVGIKADEVT 351
+ E+L ++M G++ DE T
Sbjct: 283 LLEALEYLREMVLEGVEPDEFT 304
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 155/480 (32%), Positives = 242/480 (50%), Gaps = 47/480 (9%)
Query: 59 SNSGD-------------IDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKM 105
SNSGD ID R F + + +NTII GY+ S +L + +M
Sbjct: 174 SNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREM 233
Query: 106 LRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNI 165
L PD T + + ++ G +H ++I+ G + D +I +SL+ MYA
Sbjct: 234 GTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYA----- 288
Query: 166 VWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAG 225
K + + +VF + RD SW+SL+ GYV+ G
Sbjct: 289 --------------------------KSARIEDSERVFSRLYCRDGISWNSLVAGYVQNG 322
Query: 226 EYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQT 285
Y EA+ +F +M K V SV+ ACAHL L GK +H Y++ G + + +
Sbjct: 323 RYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIAS 382
Query: 286 SLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGI 345
+LVDMY+KCG I+ A +F ++ D + W A+I G A HG E++ LF++M+ G+
Sbjct: 383 ALVDMYSKCGNIKAARKIFDRMNV--LDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGV 440
Query: 346 KADEVTYXXXXXXXXHGGLVKEAWHFFESLDKC-GMTPSSEHYACMVDVLARAGQLATAY 404
K ++V + H GLV EAW +F S+ K G+ EHYA + D+L RAG+L AY
Sbjct: 441 KPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAY 500
Query: 405 QFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVK 464
FI +M +EPT S+ LLS C H+N ELAE V K+ ++ ++ G Y+ + N+YA
Sbjct: 501 NFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNG 560
Query: 465 RWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
RW + +R M ++G++K P S +E+ + F++ D++H ++ L V QM+
Sbjct: 561 RWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQME 620
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 202/424 (47%), Gaps = 18/424 (4%)
Query: 13 LNQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
L +TL+ KS + KQLHA I + Q S + S +N + + F
Sbjct: 7 LIKTLIKNPTRIKSKSQAKQLHAQFIRT---QSLSHTSASIVISIYTNLKLLHEALLLFK 63
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
L SP + W ++IR +++ ++L+ F++M G PD+ +P + K+ +++
Sbjct: 64 TLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRF 123
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASC---GNIVWAHKVFDSVQEKNLVSWNSMLDG 189
G SVH I++ G + D + N+L++MYA G+ + VFD + ++ S + D
Sbjct: 124 GESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDE--DV 181
Query: 190 YAKCGEMVLA----HKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKAN 245
A+ M +VFE M +DV S++++I GY ++G Y +A+ + +M K +
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 246 EVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFH 305
T+ SVL + + KGK +H Y++ G+ + + +SLVDMYAK IE++ VF
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 301
Query: 306 GVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLV 365
+ R D + WN+++ G +G E+L LF+ M +K V + H +
Sbjct: 302 RLYCR--DGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATL 359
Query: 366 KEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQM----PMEPTASMLGA 421
+ + G + + +VD+ ++ G + A + +M + TA ++G
Sbjct: 360 HLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGH 419
Query: 422 LLSG 425
L G
Sbjct: 420 ALHG 423
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 144/308 (46%), Gaps = 47/308 (15%)
Query: 31 KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYS 90
K++H +I G+ D S ++ A S I+ S R FS+L WN+++ GY
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYA--KSARIEDSERVFSRLYCRDGISWNSLVAGYV 319
Query: 91 NSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRF 150
+ ++L +F +M+ + P + + + A A L G +H ++++ G + F
Sbjct: 320 QNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIF 379
Query: 151 IQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERD 210
I ++L+ MY+ CGNI A K+FD + + VSW +++ G+A
Sbjct: 380 IASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHA------------------- 420
Query: 211 VRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKG----- 265
G EA+++FE+M+ G K N+V V+VL AC+H+G +++
Sbjct: 421 ------------LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFN 468
Query: 266 KMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVL--IWNAMIGG 323
M Y GL L ++ D+ + G +EEA ++ +SK + +W+ ++
Sbjct: 469 SMTKVY----GLNQELEHYAAVADLLGRAGKLEEA---YNFISKMCVEPTGSVWSTLLSS 521
Query: 324 LATHGSVE 331
+ H ++E
Sbjct: 522 CSVHKNLE 529
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 148/468 (31%), Positives = 242/468 (51%), Gaps = 4/468 (0%)
Query: 56 SALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYL 115
S SG + + F + + WNT++ GY+ N ++L + + R G+ +
Sbjct: 121 SGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEF 180
Query: 116 TYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSV 175
++ L A + + H ++ G + + S+I YA CG + A + FD +
Sbjct: 181 SFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEM 240
Query: 176 QEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFE 235
K++ W +++ GYAK G+M A K+F M E++ SW++LI GYV+ G A+ +F
Sbjct: 241 TVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFR 300
Query: 236 KMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCG 295
KM A+G K + T S LCA A + +L GK +H Y++ + ++ +SL+DMY+K G
Sbjct: 301 KMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSG 360
Query: 296 AIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXX 355
++E + VF + K D + WN MI LA HG ++L + DM ++ + T
Sbjct: 361 SLEASERVFR-ICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVI 419
Query: 356 XXXXXHGGLVKEAWHFFESLD-KCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEP 414
H GLV+E +FES+ + G+ P EHYAC++D+L RAG + I +MP EP
Sbjct: 420 LNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEP 479
Query: 415 TASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMRE 474
+ A+L C H N EL + +LI+L+P+ YI LS++YA +W+ +R
Sbjct: 480 DKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRG 539
Query: 475 AMERRGVKKSPGFSSVEICGVSRRFIAHDKTHSDS--EETYSMLNFVA 520
M++R V K S +EI F D +H+ + EE Y +L+ +A
Sbjct: 540 VMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLA 587
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 176/374 (47%), Gaps = 13/374 (3%)
Query: 74 LSSPR---IFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQ 130
+S+PR I + + + ++ Q++S + + G+ + L + +
Sbjct: 3 ISNPRKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSL 62
Query: 131 ETGVSVHAHIIKTGHEY-DRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDG 189
+ G +H H+ TG + + + N LI MY CG + A KVFD + +NL SWN+M+ G
Sbjct: 63 KQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSG 122
Query: 190 YAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTM 249
Y K G +V A VF+SM ERDV SW++++ GY + G EA+ +++ R G K NE +
Sbjct: 123 YVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSF 182
Query: 250 VSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSK 309
+L AC L+ + H ++ G +VL S++D YAKCG +E A F ++
Sbjct: 183 AGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTV 242
Query: 310 RKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAW 369
+ D+ IW +I G A G +E + LF +M + + V++ G A
Sbjct: 243 K--DIHIWTTLISGYAKLGDMEAAEKLFCEMP----EKNPVSWTALIAGYVRQGSGNRAL 296
Query: 370 HFFESLDKCGMTPSSEHYA---CMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGC 426
F + G+ P ++ C +A + ++ + + P A ++ +L+
Sbjct: 297 DLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMY 356
Query: 427 INHRNFELAEIVGR 440
+ E +E V R
Sbjct: 357 SKSGSLEASERVFR 370
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 226/386 (58%), Gaps = 35/386 (9%)
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G ++H+ +I++G ++QNSL+H+YA+
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYAN------------------------------- 35
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
CG++ A+KVF+ M E+D+ +W+S+I+G+ + G+ EA+A++ +M + G K + T+VS+
Sbjct: 36 CGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSL 95
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT 312
L ACA +GAL GK +H Y++ GL L L+D+YA+CG +EEA +F + + +
Sbjct: 96 LSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNS 155
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDMQAV-GIKADEVTYXXXXXXXXHGGLVKEAWHF 371
+ W ++I GLA +G +E++ LFK M++ G+ E+T+ H G+VKE + +
Sbjct: 156 --VSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEY 213
Query: 372 FESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHR 430
F + ++ + P EH+ CMVD+LARAGQ+ AY++I MPM+P + LL C H
Sbjct: 214 FRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
Query: 431 NFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSV 490
+ +LAE ++++LEP+H G Y+ LSN+YA +RW D + +R+ M R GVKK PG S V
Sbjct: 274 DSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLV 333
Query: 491 EICGVSRRFIAHDKTHSDSEETYSML 516
E+ F+ DK+H S+ Y+ L
Sbjct: 334 EVGNRVHEFLMGDKSHPQSDAIYAKL 359
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 154/324 (47%), Gaps = 46/324 (14%)
Query: 31 KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYS 90
+ +H+++I SG + +L A N GD+ +Y+ F ++ + WN++I G++
Sbjct: 8 ETIHSVVIRSGFGSLIYVQNSLLHLYA--NCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 91 NSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRF 150
+ P ++L+++ +M G+ PD T L A A++ G VH ++IK G +
Sbjct: 66 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 125
Query: 151 IQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERD 210
N L+ +YA CG + A +FD + +KN VSW S++ G A
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA------------------- 166
Query: 211 VRSWSSLIDGYVKAGEYREAMAVFEKMRAV-GPKANEVTMVSVLCACAHLGALEKG---- 265
++G+ K EA+ +F+ M + G E+T V +L AC+H G +++G
Sbjct: 167 -------VNGFGK-----EAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYF 214
Query: 266 -KMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGL 324
+M +Y ++ + +VD+ A+ G +++A + + +V+IW ++G
Sbjct: 215 RRMREEYKIEPRIEHF----GCMVDLLARAGQVKKAYEYIKSMPM-QPNVVIWRTLLGAC 269
Query: 325 ATHGSVEESLGLFKDMQAVGIKAD 348
HG + L F +Q + ++ +
Sbjct: 270 TVHG--DSDLAEFARIQILQLEPN 291
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 152/458 (33%), Positives = 239/458 (52%), Gaps = 39/458 (8%)
Query: 67 SYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASAR 126
+++ F Q+ + W T+I YS K ++L + + MLR + P+ TY + ++
Sbjct: 115 AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNG 174
Query: 127 LLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSM 186
+ + +H IIK G E D F++++LI ++A G A VFD + + + WNS+
Sbjct: 175 MSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSI 231
Query: 187 LDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANE 246
+ G+A+ S DV A+ +F++M+ G A +
Sbjct: 232 IGGFAQ-------------NSRSDV------------------ALELFKRMKRAGFIAEQ 260
Query: 247 VTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHG 306
T+ SVL AC L LE G H +IV L+L +LVDMY KCG++E+AL VF+
Sbjct: 261 ATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQ 318
Query: 307 VSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVK 366
+ +R DV+ W+ MI GLA +G +E+L LF+ M++ G K + +T H GL++
Sbjct: 319 MKER--DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLE 376
Query: 367 EAWHFFESLDKC-GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSG 425
+ W++F S+ K G+ P EHY CM+D+L +AG+L A + + +M EP A LL
Sbjct: 377 DGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Query: 426 CINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSP 485
C RN LAE +K+I L+P+ G Y LSN+YA ++WD +R M RG+KK P
Sbjct: 437 CRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEP 496
Query: 486 GFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQM 523
G S +E+ FI D +H E LN + +++
Sbjct: 497 GCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRL 534
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 153/312 (49%), Gaps = 43/312 (13%)
Query: 16 TLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLS 75
T S+L C M +++ LH +I GL D F+ L + G+ + + F ++
Sbjct: 164 TYSSVLRSCNGMSDVRMLHCGIIKEGLESD-VFVRSAL-IDVFAKLGEPEDALSVFDEMV 221
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVS 135
+ +WN+II G++ + +L +F +M R G + T + +A L E G+
Sbjct: 222 TGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQ 281
Query: 136 VHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGE 195
H HI+K ++ D + N+L+ MY CG++ A +VF+ ++E+++++W++M+ G A+
Sbjct: 282 AHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQ--- 336
Query: 196 MVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCA 255
+GY + EA+ +FE+M++ G K N +T+V VL A
Sbjct: 337 -----------------------NGYSQ-----EALKLFERMKSSGTKPNYITIVGVLFA 368
Query: 256 CAHLGALEKG----KMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRK 311
C+H G LE G + M K G+ ++D+ K G +++A+ + + + + +
Sbjct: 369 CSHAGLLEDGWYYFRSMKKLY---GIDPVREHYGCMIDLLGKAGKLDDAVKLLNEM-ECE 424
Query: 312 TDVLIWNAMIGG 323
D + W ++G
Sbjct: 425 PDAVTWRTLLGA 436
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 115/244 (47%), Gaps = 36/244 (14%)
Query: 108 HGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVW 167
HGL D TY L K G + H+ GH F+ N LI+MY
Sbjct: 55 HGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMY-------- 106
Query: 168 AHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEY 227
V +N + D AH++F+ M +R+V SW+++I Y K +
Sbjct: 107 -------------VKFNLLND----------AHQLFDQMPQRNVISWTTMISAYSKCKIH 143
Query: 228 REAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSL 287
++A+ + M + N T SVL +C + +M+H I+ GL + ++++L
Sbjct: 144 QKALELLVLMLRDNVRPNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFVRSAL 200
Query: 288 VDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKA 347
+D++AK G E+AL VF + D ++WN++IGG A + + +L LFK M+ G A
Sbjct: 201 IDVFAKLGEPEDALSVFDEMV--TGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIA 258
Query: 348 DEVT 351
++ T
Sbjct: 259 EQAT 262
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 117/283 (41%), Gaps = 46/283 (16%)
Query: 16 TLLSLLDGCK--SMLEL-KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
TL S+L C ++LEL Q H ++ D+ I G ++ + R F+
Sbjct: 262 TLTSVLRACTGLALLELGMQAHVHIV----KYDQDLILNNALVDMYCKCGSLEDALRVFN 317
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
Q+ + W+T+I G + + ++L +F +M G P+Y+T + A +
Sbjct: 318 QMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACS------- 370
Query: 133 GVSVHAHIIKTGHEYDRFIQN------------SLIHMYASCGNIVWAHKVFDSVQ-EKN 179
HA +++ G Y R ++ +I + G + A K+ + ++ E +
Sbjct: 371 ----HAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPD 426
Query: 180 LVSWNSMLDGYAKCGEMVLAH---KVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEK 236
V+W ++L MVLA K ++ D +++ L + Y + ++ + +
Sbjct: 427 AVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTR 486
Query: 237 MRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIV-DNGLP 278
MR G K C+ +E K +H +I+ DN P
Sbjct: 487 MRDRGIKKEP--------GCSW---IEVNKQIHAFIIGDNSHP 518
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 160/502 (31%), Positives = 250/502 (49%), Gaps = 52/502 (10%)
Query: 31 KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSY--------RAFSQLSSPRIFIW 82
+Q+H I I +GL L F ALSN+ YS + F W
Sbjct: 241 RQIHCITIKNGL----------LGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITW 290
Query: 83 NTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIK 142
+ ++ GYS + ++++ +F +M G+ P T + A + + E G +H+ ++K
Sbjct: 291 SAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK 350
Query: 143 TGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKV 202
G E H++A+ +++D YAK G + A K
Sbjct: 351 LGFER---------HLFAT----------------------TALVDMYAKAGCLADARKG 379
Query: 203 FESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGAL 262
F+ + ERDV W+SLI GYV+ + EA+ ++ +M+ G N+ TM SVL AC+ L L
Sbjct: 380 FDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATL 439
Query: 263 EKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIG 322
E GK +H + + +G L + + ++L MY+KCG++E+ LVF + DV+ WNAMI
Sbjct: 440 ELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNK--DVVSWNAMIS 497
Query: 323 GLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESL-DKCGMT 381
GL+ +G +E+L LF++M A G++ D+VT+ H G V+ W +F + D+ G+
Sbjct: 498 GLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLD 557
Query: 382 PSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRK 441
P +HYACMVD+L+RAGQL A +FI ++ + LLS C NH EL G K
Sbjct: 558 PKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEK 617
Query: 442 LIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFIA 501
L+ L Y+ LS +Y + R D + + M GV K G S +E+ F+
Sbjct: 618 LMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVV 677
Query: 502 HDKTHSDSEETYSMLNFVAYQM 523
D H EET ++ V+ QM
Sbjct: 678 GDTMHPMIEETKDLVCLVSRQM 699
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 146/294 (49%), Gaps = 37/294 (12%)
Query: 61 SGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNS---KNPIQSLSIFLKMLRHGLAPDYLTY 117
+G ++ + F+ + + W+T++ GY+ + I+ ++FL+ G DY+
Sbjct: 166 AGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFT 225
Query: 118 PFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQE 177
L+ +A + G +H IK G + N+L+ MY+ C +S+ E
Sbjct: 226 AVLSSLAATIY-VGLGRQIHCITIKNGLLGFVALSNALVTMYSKC----------ESLNE 274
Query: 178 KNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKM 237
A K+F+S +R+ +WS+++ GY + GE EA+ +F +M
Sbjct: 275 ---------------------ACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRM 313
Query: 238 RAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAI 297
+ G K +E T+V VL AC+ + LE+GK +H +++ G L T+LVDMYAK G +
Sbjct: 314 FSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCL 373
Query: 298 EEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVT 351
+A F + +R DV +W ++I G + EE+L L++ M+ GI ++ T
Sbjct: 374 ADARKGFDCLQER--DVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPT 425
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 190/424 (44%), Gaps = 43/424 (10%)
Query: 25 KSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNT 84
++++ + +H +I +G S + ++ F A G + ++ F+ + + WN+
Sbjct: 28 RNLVAGRAVHGQIIRTGASTCIQHANVLVNFYA--KCGKLAKAHSIFNAIICKDVVSWNS 85
Query: 85 IIRGYSNSKNPIQS---LSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHII 141
+I GYS + S + +F +M + P+ T + KA + L + G HA ++
Sbjct: 86 LITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVV 145
Query: 142 KTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHK 201
K D ++ SL+ MY G + KVF + E+N +W++M+ GYA G + A K
Sbjct: 146 KMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIK 205
Query: 202 VFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEV--TMVSVLCACAHL 259
VF +F + + G ++ V ++S L A ++
Sbjct: 206 VFN----------------------------LFLREKEEGSDSDYVFTAVLSSLAATIYV 237
Query: 260 GALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNA 319
G G+ +H + NGL + L +LV MY+KC ++ EA +F R + + W+A
Sbjct: 238 GL---GRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNS--ITWSA 292
Query: 320 MIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCG 379
M+ G + +G E++ LF M + GIK E T ++E L K G
Sbjct: 293 MVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLG 352
Query: 380 MTPSSEHYACMVDVLARAGQLATAYQ-FICQMPMEPTASMLGALLSGCINHRNFELAEIV 438
+VD+ A+AG LA A + F C E ++ +L+SG + + + E A I+
Sbjct: 353 FERHLFATTALVDMYAKAGCLADARKGFDC--LQERDVALWTSLISGYVQNSDNEEALIL 410
Query: 439 GRKL 442
R++
Sbjct: 411 YRRM 414
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 160/351 (45%), Gaps = 46/351 (13%)
Query: 3 GVSPSFKIANLNQTLLSLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSALS 59
G+ PS T++ +L+ C + L KQLH+ L+ G + + +
Sbjct: 317 GIKPS------EYTIVGVLNACSDICYLEEGKQLHSFLLKLGF--ERHLFATTALVDMYA 368
Query: 60 NSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPF 119
+G + + + F L + +W ++I GY + + ++L ++ +M G+ P+ T
Sbjct: 369 KAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMAS 428
Query: 120 LAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKN 179
+ KA + L E G VH H IK G + I ++L MY+ CG++ + VF K+
Sbjct: 429 VLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKD 488
Query: 180 LVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRA 239
+VSWN+M+ G L+H G+ EA+ +FE+M A
Sbjct: 489 VVSWNAMISG--------LSHN-----------------------GQGDEALELFEEMLA 517
Query: 240 VGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDN-GLPLTLVLQTSLVDMYAKCGAIE 298
G + ++VT V+++ AC+H G +E+G + D GL + +VD+ ++ G ++
Sbjct: 518 EGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLK 577
Query: 299 EALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADE 349
EA F + + +W ++ HG E LG++ + + + + E
Sbjct: 578 EA-KEFIESANIDHGLCLWRILLSACKNHGKCE--LGVYAGEKLMALGSRE 625
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 164/505 (32%), Positives = 259/505 (51%), Gaps = 53/505 (10%)
Query: 17 LLSLLDGCKSMLELKQL--HAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQL 74
+ SL D + E ++L HA T L+Q F+ +LC G I + + F ++
Sbjct: 2 ITSLRDSSLLVAESRELITHAKCSTESLNQ--MFLFGMLCLM-----GVIASANKVFCEM 54
Query: 75 SSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGV 134
+ +W ++I GY +K+ + + F L+P
Sbjct: 55 VEKNVVLWTSMINGYLLNKDLVSARRYF------DLSP---------------------- 86
Query: 135 SVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCG 194
E D + N++I Y GN++ A +FD + ++++SWN++L+GYA G
Sbjct: 87 -----------ERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIG 135
Query: 195 EMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKA-NEVTMVSVL 253
+M +VF+ M ER+V SW+ LI GY + G E + F++M G N+ TM VL
Sbjct: 136 DMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVL 195
Query: 254 CACAHLGALEKGKMMHKYIVDNGL-PLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT 312
ACA LGA + GK +HKY G + + ++ +L+DMY KCGAIE A+ VF G+ +R
Sbjct: 196 SACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRR-- 253
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFF 372
D++ WN MI GLA HG E+L LF +M+ GI D+VT+ H GLV++ +F
Sbjct: 254 DLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYF 313
Query: 373 ESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRN 431
S+ + P EH C+VD+L+RAG L A +FI +MP++ A + LL ++
Sbjct: 314 NSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKK 373
Query: 432 FELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVE 491
++ E+ +LI+LEP + ++ LSN+Y R+DDA ++ AM G KK G S +E
Sbjct: 374 VDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIE 433
Query: 492 ICGVSRRFIAHDKTHSDSEETYSML 516
+F + + H +EE +L
Sbjct: 434 TDDGLVKFYSSGEKHPRTEELQRIL 458
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 258 bits (660), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 158/479 (32%), Positives = 248/479 (51%), Gaps = 42/479 (8%)
Query: 19 SLLDGCKSMLELKQ---LHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLS 75
+L+ C + L Q H L+ SG+ ++ +L GDI + R F++ S
Sbjct: 247 TLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLL--DMYVKCGDISNARRVFNEHS 304
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVS 135
+ +W +I GY+++ + ++LS+F KM + P+ +T + + N E G S
Sbjct: 305 HVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRS 364
Query: 136 VHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGE 195
VH IK G +D + N+L+HMYA C A VF+ EK++V+WNS++ G+++ G
Sbjct: 365 VHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGS 423
Query: 196 MVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCA 255
+ EA+ +F +M + N VT+ S+ A
Sbjct: 424 I-------------------------------HEALFLFHRMNSESVTPNGVTVASLFSA 452
Query: 256 CAHLGALEKGKMMHKYIVDNGL--PLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTD 313
CA LG+L G +H Y V G ++ + T+L+D YAKCG + A L+F + ++ T
Sbjct: 453 CASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNT- 511
Query: 314 VLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFE 373
+ W+AMIGG G SL LF++M K +E T+ H G+V E +F
Sbjct: 512 -ITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFS 570
Query: 374 SLDK-CGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNF 432
S+ K TPS++HY CMVD+LARAG+L A I +MP++P GA L GC H F
Sbjct: 571 SMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRF 630
Query: 433 ELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVE 491
+L EIV +K+++L PD Y+ +SN+YA RW+ A+ +R M++RG+ K G S++E
Sbjct: 631 DLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 166/335 (49%), Gaps = 42/335 (12%)
Query: 20 LLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRA---FSQLSS 76
LL C ++ L+Q H +L +GL D +K++ S G Y+ A F Q+
Sbjct: 50 LLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLV-----SLYGFFGYTKDARLVFDQIPE 104
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P ++W ++R Y +K ++ + ++ +++HG D + + KA L + + G +
Sbjct: 105 PDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKI 164
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEM 196
H ++K FD+V +LD YAKCGE+
Sbjct: 165 HCQLVKV--------------------------PSFDNV------VLTGLLDMYAKCGEI 192
Query: 197 VLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCAC 256
AHKVF ++ R+V W+S+I GYVK E + +F +MR NE T +++ AC
Sbjct: 193 KSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMAC 252
Query: 257 AHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLI 316
L AL +GK H +V +G+ L+ L TSL+DMY KCG I A VF+ D+++
Sbjct: 253 TKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFN--EHSHVDLVM 310
Query: 317 WNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVT 351
W AMI G +GSV E+L LF+ M+ V IK + VT
Sbjct: 311 WTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVT 345
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 157/346 (45%), Gaps = 49/346 (14%)
Query: 16 TLLSLLDGCKSM--LEL-KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
T+ S+L GC + LEL + +H + I G+ + V ++ + D Y F
Sbjct: 345 TIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKY---VFE 401
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
S I WN+II G+S + + ++L +F +M + P+ +T L A A L +
Sbjct: 402 MESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAV 461
Query: 133 GVSVHAHIIKTGH--EYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGY 190
G S+HA+ +K G + +L+ YA CG+ A +FD+++EKN ++W++M+ GY
Sbjct: 462 GSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGY 521
Query: 191 AKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMV 250
K G+ + + ++FE M ++ K NE T
Sbjct: 522 GKQGDTIGSLELFEEMLKKQ-------------------------------QKPNESTFT 550
Query: 251 SVLCACAHLGALEKGKM----MHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHG 306
S+L AC H G + +GK M+K D + T +VDM A+ G +E+AL +
Sbjct: 551 SILSACGHTGMVNEGKKYFSSMYK---DYNFTPSTKHYTCMVDMLARAGELEQALDIIEK 607
Query: 307 VSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
+ + DV + A + G H + LG + + + D+ +Y
Sbjct: 608 MPIQP-DVRCFGAFLHGCGMHSRFD--LGEIVIKKMLDLHPDDASY 650
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 118/255 (46%), Gaps = 12/255 (4%)
Query: 199 AHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAH 258
A VF+ + E D W ++ Y E E + +++ + G + +++ L AC
Sbjct: 95 ARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTE 154
Query: 259 LGALEKGKMMHKYIVDNGLP-LTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIW 317
L L+ GK +H +V +P V+ T L+DMYAKCG I+ A VF+ ++ R +V+ W
Sbjct: 155 LQDLDNGKKIHCQLVK--VPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLR--NVVCW 210
Query: 318 NAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDK 377
+MI G + EE L LF M+ + +E TY + + F L K
Sbjct: 211 TSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVK 270
Query: 378 CGMTPSSEHYACMVDVLARAGQLATAYQFICQMP----MEPTASMLGALLSGCINHRNFE 433
G+ SS ++D+ + G ++ A + + + TA ++G +G +N
Sbjct: 271 SGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNE---A 327
Query: 434 LAEIVGRKLIELEPD 448
L+ K +E++P+
Sbjct: 328 LSLFQKMKGVEIKPN 342
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 258 bits (659), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 155/512 (30%), Positives = 265/512 (51%), Gaps = 41/512 (8%)
Query: 19 SLLDGC---KSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLS 75
+LL+ C +++ + +++HA +I + +++L F + ++ + + ++
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDC--LEDARKVLDEMP 114
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVS 135
+ W +I YS + + ++L++F +M+R P+ T+ + + R G
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 136 VHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGE 195
+H I+K ++ F+ +SL LD YAK G+
Sbjct: 175 IHGLIVKWNYDSHIFVGSSL-------------------------------LDMYAKAGQ 203
Query: 196 MVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCA 255
+ A ++FE + ERDV S +++I GY + G EA+ +F ++ + G N VT S+L A
Sbjct: 204 IKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTA 263
Query: 256 CAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVL 315
+ L L+ GK H +++ LP VLQ SL+DMY+KCG + A +F + +R +
Sbjct: 264 LSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTA--I 321
Query: 316 IWNAMIGGLATHGSVEESLGLFKDMQ-AVGIKADEVTYXXXXXXXXHGGLVKEAWHFFES 374
WNAM+ G + HG E L LF+ M+ +K D VT HG + + F+
Sbjct: 322 SWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDG 381
Query: 375 L--DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNF 432
+ + G P +EHY C+VD+L RAG++ A++FI +MP +PTA +LG+LL C H +
Sbjct: 382 MVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSV 441
Query: 433 ELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEI 492
++ E VGR+LIE+EP++ G Y+ LSN+YA RW D +R M ++ V K PG S ++
Sbjct: 442 DIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQH 501
Query: 493 CGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
F A+D+TH EE + + ++ +MK
Sbjct: 502 EQTLHYFHANDRTHPRREEVLAKMKEISIKMK 533
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 166/396 (41%), Gaps = 80/396 (20%)
Query: 68 YRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSL-------SIFLKMLRHGLAPDYLTYPFL 120
+R+FS SSP ++ TI+ PI L L+M G + Y L
Sbjct: 9 HRSFS--SSPTNYVLQTIL--------PISQLCSNGRLQEALLEMAMLGPEMGFHGYDAL 58
Query: 121 AKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNL 180
A G VHAH+IKT + +++ L+ Y C D +++
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKC----------DCLED--- 105
Query: 181 VSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAV 240
A KV + M E++V SW+++I Y + G EA+ VF +M
Sbjct: 106 ------------------ARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRS 147
Query: 241 GPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEA 300
K NE T +VL +C L GK +H IV + + +SL+DMYAK G I+EA
Sbjct: 148 DGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEA 207
Query: 301 LLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXX-- 358
+F + +R DV+ A+I G A G EE+L +F + + G+ + VTY
Sbjct: 208 REIFECLPER--DVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALS 265
Query: 359 ---------XXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQ 409
H +++ F+ L ++D+ ++ G L+ A +
Sbjct: 266 GLALLDHGKQAHCHVLRRELPFYAVLQN-----------SLIDMYSKCGNLSYARRLFDN 314
Query: 410 MPMEPTASMLGALLSGCINHRNFELAEIVGRKLIEL 445
MP E TA A+L G H +GR+++EL
Sbjct: 315 MP-ERTAISWNAMLVGYSKHG-------LGREVLEL 342
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 96/233 (41%), Gaps = 27/233 (11%)
Query: 196 MVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCA 255
M L H+ F S V I G +EA+ +M +GP+ ++L A
Sbjct: 5 MRLIHRSFSSSPTNYVLQTILPISQLCSNGRLQEALL---EMAMLGPEMGFHGYDALLNA 61
Query: 256 CAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVL 315
C AL G+ +H +++ L+T L+ Y KC +E+A V + ++ +V+
Sbjct: 62 CLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK--NVV 119
Query: 316 IWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXX-----------XXHGGL 364
W AMI + G E+L +F +M K +E T+ HG +
Sbjct: 120 SWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLI 179
Query: 365 VKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTAS 417
VK W++ D SS ++D+ A+AGQ+ A + +P S
Sbjct: 180 VK--WNY----DSHIFVGSS-----LLDMYAKAGQIKEAREIFECLPERDVVS 221
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/486 (30%), Positives = 265/486 (54%), Gaps = 17/486 (3%)
Query: 50 SKVLCFSALSNSGDIDYSYRAFSQLSS----PRIFIWNTIIRGYSNSKNPIQSLSIFLKM 105
S +LC A + G ++ R S++ S I WN I+ G++ S +++ +F K+
Sbjct: 186 SALLC--AYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKI 243
Query: 106 LRHGLAPDYLTYPFL--AKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCG 163
G PD +T + + + +LN G +H ++IK G D+ + +++I MY G
Sbjct: 244 HHLGFCPDQVTVSSVLPSVGDSEMLNM--GRLIHGYVIKQGLLKDKCVISAMIDMYGKSG 301
Query: 164 NIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSER----DVRSWSSLID 219
++ +F+ + N+ + G ++ G + A ++FE E+ +V SW+S+I
Sbjct: 302 HVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIA 361
Query: 220 GYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPL 279
G + G+ EA+ +F +M+ G K N VT+ S+L AC ++ AL G+ H + V L
Sbjct: 362 GCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD 421
Query: 280 TLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKD 339
+ + ++L+DMYAKCG I + +VF+ + + +++ WN+++ G + HG +E + +F+
Sbjct: 422 NVHVGSALIDMYAKCGRINLSQIVFNMMPTK--NLVCWNSLMNGFSMHGKAKEVMSIFES 479
Query: 340 MQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESL-DKCGMTPSSEHYACMVDVLARAG 398
+ +K D +++ GL E W +F+ + ++ G+ P EHY+CMV++L RAG
Sbjct: 480 LMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAG 539
Query: 399 QLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSN 458
+L AY I +MP EP + + GALL+ C N +LAEI KL LEP++ G Y+ LSN
Sbjct: 540 KLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSN 599
Query: 459 VYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNF 518
+YA W + +R ME G+KK+PG S +++ +A DK+H ++ ++
Sbjct: 600 IYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDE 659
Query: 519 VAYQMK 524
++ +M+
Sbjct: 660 ISKEMR 665
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 187/356 (52%), Gaps = 8/356 (2%)
Query: 32 QLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSN 91
Q HA ++ SG +Q++ +IS L ++ SN + + + P I+ ++++I +
Sbjct: 36 QAHARILKSG-AQNDGYISAKL-IASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTK 93
Query: 92 SKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFI 151
+K QS+ +F +M HGL PD P L K A L + G +H +G + D F+
Sbjct: 94 AKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV 153
Query: 152 QNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMS---- 207
Q S+ HMY CG + A KVFD + +K++V+ +++L YA+ G + ++ M
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI 213
Query: 208 ERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKM 267
E ++ SW+ ++ G+ ++G ++EA+ +F+K+ +G ++VT+ SVL + L G++
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRL 273
Query: 268 MHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATH 327
+H Y++ GL + ++++DMY K G + + +F+ + V NA I GL+ +
Sbjct: 274 IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVC--NAYITGLSRN 331
Query: 328 GSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPS 383
G V+++L +F+ + ++ + V++ G EA F + G+ P+
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPN 387
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 157/561 (27%), Positives = 277/561 (49%), Gaps = 78/561 (13%)
Query: 30 LKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGY 89
+ Q+HA +I++G + IS+ L ++ G+I Y+ + F +L + ++N++I Y
Sbjct: 33 ITQIHAFVISTGNLLNGSSISRDL-IASCGRIGEISYARKVFDELPQRGVSVYNSMIVVY 91
Query: 90 SNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDR 149
S KNP + L ++ +M+ + PD T+ KA L E G +V + G++ D
Sbjct: 92 SRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDV 151
Query: 150 FIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSE- 208
F+ +S++++Y CG + A +F + +++++ W +M+ G+A+ G+ + A + + M
Sbjct: 152 FVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNE 211
Query: 209 -------------------------RDVRSW-------------SSLIDGYVKAGEYREA 230
R V + +SL+D Y K G A
Sbjct: 212 GFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVA 271
Query: 231 MAVFEK-------------------------------MRAVGPKANEVTMVSVLCACAHL 259
VF + M+++G + + VT+V VL AC+ +
Sbjct: 272 SRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQV 331
Query: 260 GALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNA 319
G+L+ G+++H YI+ + L V T+L+DMY+KCGA+ + +F V ++ D++ WN
Sbjct: 332 GSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGRK--DLVCWNT 388
Query: 320 MIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESL-DKC 378
MI HG+ +E + LF M I+ D T+ H GLV++ H+F + +K
Sbjct: 389 MISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKY 448
Query: 379 GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIV 438
+ PS +HY C++D+LARAG++ A I ++ + ALLSGCINHRN + +I
Sbjct: 449 KIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIA 508
Query: 439 GRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRR 498
K+++L PD G +SN +A +W + +R+ M ++K PG+S++E+ G R
Sbjct: 509 ANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRT 568
Query: 499 FIAHDKTHSDSEETYSMLNFV 519
F+ D +H E Y ML +
Sbjct: 569 FLMEDLSH---HEHYHMLQVL 586
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 160/506 (31%), Positives = 256/506 (50%), Gaps = 47/506 (9%)
Query: 38 ITSGLSQDEPF-ISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPI 96
+T QD+ F ++K++ + SGDID + R F + + WN+++ G S K+P
Sbjct: 52 LTKPSDQDQIFPLNKII--ARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGIS--KDPS 107
Query: 97 QSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHI-IKTGHEYDRFIQNSL 155
+ + ++ PD +Y + R +N E S + K + N++
Sbjct: 108 RMMEAH-QLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASW-----NTM 161
Query: 156 IHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWS 215
I YA G + A ++F S+ EKN VSWN+M+ GY +CG++ A F+ R V +W+
Sbjct: 162 ITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWT 221
Query: 216 SLIDGYVKAGEYREAMAVFEKM-----------------------------RAV---GPK 243
++I GY+KA + A A+F+ M RA+ G +
Sbjct: 222 AMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIR 281
Query: 244 ANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLV 303
N + S L C+ L AL+ G+ +H+ + + L + TSL+ MY KCG + +A +
Sbjct: 282 PNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKL 341
Query: 304 FHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGG 363
F + K+ DV+ WNAMI G A HG+ +++L LF++M I+ D +T+ H G
Sbjct: 342 FEVMKKK--DVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAG 399
Query: 364 LVKEAWHFFESLDK-CGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGAL 422
LV +FES+ + + P +HY CMVD+L RAG+L A + I MP P A++ G L
Sbjct: 400 LVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTL 459
Query: 423 LSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVK 482
L C H+N ELAE KL++L + Y+ L+N+YA RW+D +R+ M+ V
Sbjct: 460 LGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVV 519
Query: 483 KSPGFSSVEICGVSRRFIAHDKTHSD 508
K PG+S +EI F + D+ H +
Sbjct: 520 KVPGYSWIEIRNKVHHFRSSDRIHPE 545
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 145/344 (42%), Gaps = 44/344 (12%)
Query: 139 HIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK-CGEMV 197
++ K + F N +I G+I A +VF ++ KN ++WNS+L G +K M+
Sbjct: 51 YLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMM 110
Query: 198 LAHKVFESMSE-------------------------------RDVRSWSSLIDGYVKAGE 226
AH++F+ + E +D SW+++I GY + GE
Sbjct: 111 EAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGE 170
Query: 227 YREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTS 286
+A +F M + NEV+ +++ G LEK K G +V T+
Sbjct: 171 MEKARELFYSMM----EKNEVSWNAMISGYIECGDLEKASHFFKVAPVRG----VVAWTA 222
Query: 287 LVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIK 346
++ Y K +E A +F ++ K +++ WNAMI G + E+ L LF+ M GI+
Sbjct: 223 MITGYMKAKKVELAEAMFKDMTVNK-NLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIR 281
Query: 347 ADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQF 406
+ ++ + + K + ++ + + G+L A++
Sbjct: 282 PNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKL 341
Query: 407 ICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIE--LEPD 448
M + + A++SG H N + A + R++I+ + PD
Sbjct: 342 FEVMKKKDVVA-WNAMISGYAQHGNADKALCLFREMIDNKIRPD 384
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 17 LLSLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQ 73
L S L GC + L +Q+H I+ S L D ++ ++ S G++ +++ F
Sbjct: 287 LSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLI--SMYCKCGELGDAWKLFEV 344
Query: 74 LSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTY 117
+ + WN +I GY+ N ++L +F +M+ + + PD++T+
Sbjct: 345 MKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITF 388
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 254 bits (650), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 159/518 (30%), Positives = 246/518 (47%), Gaps = 82/518 (15%)
Query: 79 IFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHA 138
+F WN++I + S + ++L F M + L P ++P KA + L + +G H
Sbjct: 41 VFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQ 100
Query: 139 HIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVL 198
G++ D F+ ++LI MY++CG + A KVFD + ++N+VSW SM+ GY G +
Sbjct: 101 QAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALD 160
Query: 199 AHKVFESM---------------------------------------------SERDVRS 213
A +F+ + +R V
Sbjct: 161 AVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSV 220
Query: 214 WSSLIDGYVKAGE--------------------YREAMAVFEK-----------MRAVGP 242
++L+D Y K GE Y M+V+ + R V
Sbjct: 221 GNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKN 280
Query: 243 KA---NEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEE 299
K N +T+ +VL A +H GAL GK +H ++ GL +++ TS++DMY KCG +E
Sbjct: 281 KVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVET 340
Query: 300 ALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXX 359
A F + + +V W AMI G HG ++L LF M G++ + +T+
Sbjct: 341 ARKAFDRMKNK--NVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAAC 398
Query: 360 XHGGLVKEAWHFFESLD-KCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASM 418
H GL E W +F ++ + G+ P EHY CMVD+L RAG L AY I +M M+P + +
Sbjct: 399 SHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSII 458
Query: 419 LGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMER 478
+LL+ C H+N ELAEI +L EL+ + G Y+ LS++YA RW D +R M+
Sbjct: 459 WSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKN 518
Query: 479 RGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSML 516
RG+ K PGFS +E+ G F+ D+ H E+ Y L
Sbjct: 519 RGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFL 556
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 142/326 (43%), Gaps = 49/326 (15%)
Query: 17 LLSLLDGC-----KSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAF 71
L+S++ C K + E +H+ +I G + + +L A G + + + F
Sbjct: 186 LVSVISACSRVPAKGLTE--SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIF 243
Query: 72 SQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAP-DYLTYPFLAKASARLLNQ 130
Q+ +N+I+ Y+ S ++ +F +++++ + + +T + A +
Sbjct: 244 DQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGAL 303
Query: 131 ETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGY 190
G +H +I+ G E D + S+I MY CG + A K FD ++ KN+ SW +M+ GY
Sbjct: 304 RIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGY 363
Query: 191 AKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMV 250
G A ++F +M + VR N +T V
Sbjct: 364 GMHGHAAKALELFPAMIDSGVR-------------------------------PNYITFV 392
Query: 251 SVLCACAHLGALEKG-----KMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFH 305
SVL AC+H G +G M ++ V+ GL +VD+ + G +++A +
Sbjct: 393 SVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLE----HYGCMVDLLGRAGFLQKAYDLIQ 448
Query: 306 GVSKRKTDVLIWNAMIGGLATHGSVE 331
+ K K D +IW++++ H +VE
Sbjct: 449 RM-KMKPDSIIWSSLLAACRIHKNVE 473
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 72/135 (53%), Gaps = 2/135 (1%)
Query: 206 MSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKG 265
+ + DV SW+S+I ++G+ EA+ F MR + + + AC+ L + G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 266 KMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLA 325
K H+ G + + ++L+ MY+ CG +E+A VF + KR +++ W +MI G
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKR--NIVSWTSMIRGYD 153
Query: 326 THGSVEESLGLFKDM 340
+G+ +++ LFKD+
Sbjct: 154 LNGNALDAVSLFKDL 168
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 175/558 (31%), Positives = 266/558 (47%), Gaps = 82/558 (14%)
Query: 12 NLNQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAF 71
N + LL++L K++ +Q+HA +I G +DE + L +A S +D++ +F
Sbjct: 5 NRARALLTILSQAKTLNHTQQVHAKVIIHGF-EDEVVLGSSLT-NAYIQSNRLDFATSSF 62
Query: 72 SQLSSPRI--FIWNTIIRGYSNSKNPIQS--LSIFLKMLRHGLAPDYLTYPFLAKASARL 127
+++ + WNTI+ GYS SK S L ++ +M RH D F KA L
Sbjct: 63 NRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGL 122
Query: 128 LNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSML 187
E G+ +H +K G + D ++ SL+ MYA G + A KVFD + +N V W ++
Sbjct: 123 GLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLM 182
Query: 188 DGYAK--------------------------------CGEMVLAHKVFESMSERDVRS-- 213
GY K CG V A KV + + +R
Sbjct: 183 KGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGN-VFAGKVGKCVHGVSIRRSF 241
Query: 214 -------WSSLIDGYVKAGEYREAMAVFEKM-------------------RAV------- 240
+S+ID YVK A +FE RAV
Sbjct: 242 IDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFR 301
Query: 241 -----GPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCG 295
N+ T+ ++L +C+ LG+L GK +H Y++ NG+ + V TS +DMYA+CG
Sbjct: 302 QMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCG 361
Query: 296 AIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXX 355
I+ A VF + +R +V+ W++MI +G EE+L F M++ + + VT+
Sbjct: 362 NIQMARTVFDMMPER--NVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSL 419
Query: 356 XXXXXHGGLVKEAWHFFESLDK-CGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEP 414
H G VKE W FES+ + G+ P EHYACMVD+L RAG++ A FI MP++P
Sbjct: 420 LSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKP 479
Query: 415 TASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMRE 474
AS GALLS C H+ +LA + KL+ +EP+ Y+ LSN+YA W+ +R
Sbjct: 480 MASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRR 539
Query: 475 AMERRGVKKSPGFSSVEI 492
M +G +K G S+ E+
Sbjct: 540 KMGIKGYRKHVGQSATEV 557
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 252 bits (643), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 170/515 (33%), Positives = 261/515 (50%), Gaps = 37/515 (7%)
Query: 12 NLNQTLLSLLDGCKSMLELK--QLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYR 69
N NQ LL ++ +K QLH ++ SGLS P ++ L + S S S R
Sbjct: 14 NYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLI-PLVANNL-INFYSKSQLPFDSRR 71
Query: 70 AFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLN 129
AF W++II ++ ++ P SL KM+ L PD P K+ A L
Sbjct: 72 AFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSR 131
Query: 130 QETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDG 189
+ G SVH +KTG++ D F+ +SL+ MYA
Sbjct: 132 CDIGRSVHCLSMKTGYDADVFVGSSLVDMYA----------------------------- 162
Query: 190 YAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTM 249
KCGE+V A K+F+ M +R+V +WS ++ GY + GE EA+ +F++ N+ +
Sbjct: 163 --KCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSF 220
Query: 250 VSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSK 309
SV+ CA+ LE G+ +H + + + + +SLV +Y+KCG E A VF+ V
Sbjct: 221 SSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPV 280
Query: 310 RKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAW 369
+ ++ IWNAM+ A H ++ + LFK M+ G+K + +T+ H GLV E
Sbjct: 281 K--NLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGR 338
Query: 370 HFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINH 429
++F+ + + + P+ +HYA +VD+L RAG+L A + I MP++PT S+ GALL+ C H
Sbjct: 339 YYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVH 398
Query: 430 RNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSS 489
+N ELA K+ EL P G +I LSN YA R++DA R+ + RG KK G S
Sbjct: 399 KNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSW 458
Query: 490 VEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
VE F A ++ H S+E Y L + +M+
Sbjct: 459 VEERNKVHTFAAGERRHEKSKEIYEKLAELGEEME 493
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 252 bits (643), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 149/488 (30%), Positives = 242/488 (49%), Gaps = 42/488 (8%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P I WN+++ GY++ ++++ +M GL P + L +A A + + G ++
Sbjct: 188 PDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAI 247
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDG------- 189
H +I++ YD +++ +LI MY G + +A VFD + KN+V+WNS++ G
Sbjct: 248 HGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLL 307
Query: 190 ----------------------------YAKCGEMVLAHKVFESMSER----DVRSWSSL 217
YA G+ A V M E+ +V SW+++
Sbjct: 308 KDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAI 367
Query: 218 IDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGL 277
G K G +R A+ VF KM+ G N TM ++L L L GK +H + + L
Sbjct: 368 FSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNL 427
Query: 278 PLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLF 337
+ T+LVDMY K G ++ A+ +F G+ + + WN M+ G A G EE + F
Sbjct: 428 ICDAYVATALVDMYGKSGDLQSAIEIFWGIKNK--SLASWNCMLMGYAMFGRGEEGIAAF 485
Query: 338 KDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESL-DKCGMTPSSEHYACMVDVLAR 396
M G++ D +T+ + GLV+E W +F+ + + G+ P+ EH +CMVD+L R
Sbjct: 486 SVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGR 545
Query: 397 AGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGL 456
+G L A+ FI M ++P A++ GA LS C HR+ ELAEI ++L LEP + Y+ +
Sbjct: 546 SGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMM 605
Query: 457 SNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSML 516
N+Y+ + RW+D +R M V+ +S ++I F A KTH D + Y L
Sbjct: 606 INLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFEL 665
Query: 517 NFVAYQMK 524
+ +MK
Sbjct: 666 YKLVSEMK 673
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 202/406 (49%), Gaps = 14/406 (3%)
Query: 33 LHAILITSGL-SQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSN 91
+H LI GL + D +S + F S + ++ + F ++ WN I+
Sbjct: 9 IHGGLIKRGLDNSDTRVVSASMGFYGRCVS--LGFANKLFDEMPKRDDLAWNEIVMVNLR 66
Query: 92 SKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFI 151
S N +++ +F +M G T L + + G +H ++++ G E + +
Sbjct: 67 SGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSM 126
Query: 152 QNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMS---- 207
NSLI MY+ G + + KVF+S++++NL SWNS+L Y K G + A + + M
Sbjct: 127 CNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGL 186
Query: 208 ERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKM 267
+ D+ +W+SL+ GY G ++A+AV ++M+ G K + ++ S+L A A G L+ GK
Sbjct: 187 KPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKA 246
Query: 268 MHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATH 327
+H YI+ N L + ++T+L+DMY K G + A +VF + + +++ WN+++ GL+
Sbjct: 247 IHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK--NIVAWNSLVSGLSYA 304
Query: 328 GSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHY 387
++++ L M+ GIK D +T+ G ++A + + G+ P+ +
Sbjct: 305 CLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSW 364
Query: 388 ACMVDVLARAGQLATAYQFICQMPME---PTASMLGALLS--GCIN 428
+ ++ G A + +M E P A+ + LL GC++
Sbjct: 365 TAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLS 410
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 116/273 (42%), Gaps = 41/273 (15%)
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVS 135
+P + W I G S + N +L +F+KM G+ P+ T L K L +G
Sbjct: 358 APNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKE 417
Query: 136 VHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGE 195
VH ++ D ++ +L+ MY G++ A ++F ++ K+L SWN ML GYA G
Sbjct: 418 VHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGR 477
Query: 196 MVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCA 255
GE E +A F M G + + +T SVL
Sbjct: 478 -----------------------------GE--EGIAAFSVMLEAGMEPDAITFTSVLSV 506
Query: 256 CAHLGALEKG-----KMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR 310
C + G +++G M +Y G+ T+ + +VD+ + G ++EA +S
Sbjct: 507 CKNSGLVQEGWKYFDLMRSRY----GIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMS-L 561
Query: 311 KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAV 343
K D IW A + H +E + +K +Q +
Sbjct: 562 KPDATIWGAFLSSCKIHRDLELAEIAWKRLQVL 594
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 154/537 (28%), Positives = 257/537 (47%), Gaps = 76/537 (14%)
Query: 62 GDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKM-LRHGLAPDYLTYPFL 120
G + + R F +L P I W++++ G+ + +P Q++ F +M + + PD +T L
Sbjct: 110 GRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITL 169
Query: 121 AKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNL 180
A +L N G VH +I+ G D + NSL++ YA A +F + EK++
Sbjct: 170 VSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDV 229
Query: 181 VSWNSMLDGYAKCGEMVLAHKVFESMS--------------------------------- 207
+SW++++ Y + G A VF M
Sbjct: 230 ISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHEL 289
Query: 208 ------ERDVRSWSSLIDGYVKAGEYREAMAVFEKM----------------------RA 239
E +V+ ++L+D Y+K EA AVF ++ R+
Sbjct: 290 AIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRS 349
Query: 240 V----------GPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVD 289
+ + + + MV VL +C+ LG LE+ K H Y++ G + SLV+
Sbjct: 350 IEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVE 409
Query: 290 MYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDM-QAVGIKAD 348
+Y++CG++ A VF+G++ + D ++W ++I G HG ++L F M ++ +K +
Sbjct: 410 LYSRCGSLGNASKVFNGIALK--DTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPN 467
Query: 349 EVTYXXXXXXXXHGGLVKEAWHFFESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFI 407
EVT+ H GL+ E F+ + + + P+ EHYA +VD+L R G L TA +
Sbjct: 468 EVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEIT 527
Query: 408 CQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWD 467
+MP PT +LG LL C H+N E+AE V +KL ELE +H G Y+ +SNVY W+
Sbjct: 528 KRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWE 587
Query: 468 DARGMREAMERRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
+ +R ++++RG+KK S +EI RF+A D+ H + E Y +L + MK
Sbjct: 588 NVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMK 644
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 163/369 (44%), Gaps = 40/369 (10%)
Query: 71 FSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQ 130
F +++ ++ WNT+++ S K + L F M R PD T P KA L
Sbjct: 17 FGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREV 76
Query: 131 ETGVSVHAHIIK-TGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDG 189
G +H + K D ++ +SLI+MY
Sbjct: 77 NYGEMIHGFVKKDVTLGSDLYVGSSLIYMYI----------------------------- 107
Query: 190 YAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKM-RAVGPKANEVT 248
KCG M+ A ++F+ + + D+ +WSS++ G+ K G +A+ F +M A + VT
Sbjct: 108 --KCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVT 165
Query: 249 MVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVS 308
+++++ AC L G+ +H +++ G L L SL++ YAK A +EA+ +F ++
Sbjct: 166 LITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIA 225
Query: 309 KRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEA 368
++ DV+ W+ +I +G+ E+L +F DM G + + T +++
Sbjct: 226 EK--DVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQG 283
Query: 369 WHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGC-- 426
E + G+ + +VD+ + AY ++P + S + AL+SG
Sbjct: 284 RKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWV-ALISGFTL 342
Query: 427 --INHRNFE 433
+ HR+ E
Sbjct: 343 NGMAHRSIE 351
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 82/157 (52%), Gaps = 4/157 (2%)
Query: 197 VLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCAC 256
V A ++F M++R + W++L+ + ++ E + F M K + T+ L AC
Sbjct: 11 VDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKAC 70
Query: 257 AHLGALEKGKMMHKYI-VDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVL 315
L + G+M+H ++ D L L + +SL+ MY KCG + EAL +F + K D++
Sbjct: 71 GELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDEL--EKPDIV 128
Query: 316 IWNAMIGGLATHGSVEESLGLFKDM-QAVGIKADEVT 351
W++M+ G +GS +++ F+ M A + D VT
Sbjct: 129 TWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVT 165
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 251 bits (641), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 152/466 (32%), Positives = 248/466 (53%), Gaps = 12/466 (2%)
Query: 31 KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYS 90
K++HA +I +G D K+L G + Y+ + F +L P + +N +I GY
Sbjct: 54 KKIHADIIKTGFQPDLNISIKLLILHL--KCGCLSYARQVFDELPKPTLSAYNYMISGYL 111
Query: 91 NSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKAS-----ARLLNQETGVSVHAHIIKTGH 145
+ L + +M G D T + KAS +L + VHA IIK
Sbjct: 112 KHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDV 171
Query: 146 EYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFES 205
E D + +L+ Y G + A VF++++++N+V SM+ GY G + A ++F +
Sbjct: 172 ELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNT 231
Query: 206 MSERDVRSWSSLIDGYVKAGEY-REAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEK 264
+D+ ++++++G+ ++GE + ++ ++ M+ G N T SV+ AC+ L + E
Sbjct: 232 TKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEV 291
Query: 265 GKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGL 324
G+ +H I+ +G+ + + +SL+DMYAKCG I +A VF + ++ +V W +MI G
Sbjct: 292 GQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEK--NVFSWTSMIDGY 349
Query: 325 ATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDK-CGMTPS 383
+G+ EE+L LF M+ I+ + VT+ H GLV + + FES+ + M P
Sbjct: 350 GKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPK 409
Query: 384 SEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLI 443
EHYAC+VD++ RAG L A++F MP P + + ALLS C H N ELA I +L
Sbjct: 410 MEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELF 469
Query: 444 ELEPD-HDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFS 488
+L D G Y+ LSNVYA +WD+ +RE M+RR + K+ G S
Sbjct: 470 KLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 116/267 (43%), Gaps = 43/267 (16%)
Query: 131 ETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGY 190
+ G +HA IIKTG + D I L+ ++ CG + +A +VFD + + L ++N M
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYM---- 106
Query: 191 AKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMV 250
I GY+K G +E + + ++M G KA+ T+
Sbjct: 107 ---------------------------ISGYLKHGLVKELLLLVQRMSYSGEKADGYTLS 139
Query: 251 SVLCACAHLGA---LEKG--KMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFH 305
VL A G+ L + +++H I+ + L VL T+LVD Y K G +E A VF
Sbjct: 140 MVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFE 199
Query: 306 GVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGG-L 364
+ + +V+ +MI G G VE++ +F + D V Y G
Sbjct: 200 --TMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKV----KDIVVYNAMVEGFSRSGET 253
Query: 365 VKEAWHFFESLDKCGMTPSSEHYACMV 391
K + + S+ + G P+ +A ++
Sbjct: 254 AKRSVDMYISMQRAGFHPNISTFASVI 280
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 149/437 (34%), Positives = 225/437 (51%), Gaps = 42/437 (9%)
Query: 82 WNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHII 141
WN ++ GY+ S + ++L +F M + G D T + K L G VHA+ I
Sbjct: 485 WNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAI 544
Query: 142 KTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHK 201
K+G++ D ++ + + LD Y KCG+M A
Sbjct: 545 KSGYDLDLWVSSGI-------------------------------LDMYVKCGDMSAAQF 573
Query: 202 VFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGA 261
F+S+ D +W+++I G ++ GE A VF +MR +G +E T+ ++ A + L A
Sbjct: 574 AFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTA 633
Query: 262 LEKGKMMHKYIVDNGLPLTLV----LQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIW 317
LE+G+ +H N L L + TSLVDMYAKCG+I++A +F + ++ W
Sbjct: 634 LEQGRQIHA----NALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRI--EMMNITAW 687
Query: 318 NAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLD- 376
NAM+ GLA HG +E+L LFK M+++GIK D+VT+ H GLV EA+ S+
Sbjct: 688 NAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHG 747
Query: 377 KCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAE 436
G+ P EHY+C+ D L RAG + A I M ME +ASM LL+ C + E +
Sbjct: 748 DYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGK 807
Query: 437 IVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVS 496
V KL+ELEP Y+ LSN+YA +WD+ + R M+ VKK PGFS +E+
Sbjct: 808 RVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKI 867
Query: 497 RRFIAHDKTHSDSEETY 513
F+ D+++ +E Y
Sbjct: 868 HIFVVDDRSNRQTELIY 884
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 162/368 (44%), Gaps = 42/368 (11%)
Query: 66 YSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASA 125
++ F +S + WN++I G + + ++++ +F+++LR GL PD T + KA++
Sbjct: 368 FARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Query: 126 RLLNQETGVS----VHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLV 181
L G+S VH H IK + D F+ +LI
Sbjct: 428 SL---PEGLSLSKQVHVHAIKINNVSDSFVSTALI------------------------- 459
Query: 182 SWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVG 241
D Y++ M A +FE + D+ +W++++ GY ++ + + + +F M G
Sbjct: 460 ------DAYSRNRCMKEAEILFERHN-FDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQG 512
Query: 242 PKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEAL 301
++++ T+ +V C L A+ +GK +H Y + +G L L + + ++DMY KCG + A
Sbjct: 513 ERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQ 572
Query: 302 LVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXH 361
F + D + W MI G +G E + +F M+ +G+ DE T
Sbjct: 573 FAFDSIP--VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSC 630
Query: 362 GGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGA 421
+++ + K T +VD+ A+ G + AY ++ M + A
Sbjct: 631 LTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNA 689
Query: 422 LLSGCINH 429
+L G H
Sbjct: 690 MLVGLAQH 697
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 133/289 (46%), Gaps = 37/289 (12%)
Query: 16 TLLSLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
TL ++ C + + KQ+HA I SG D S +L GD+ + AF
Sbjct: 519 TLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGIL--DMYVKCGDMSAAQFAFD 576
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
+ P W T+I G + ++ +F +M G+ PD T LAKAS+ L E
Sbjct: 577 SIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQ 636
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G +HA+ +K D F+ SL+ MYA CG+I A+ +F ++ N+ +WN+ML G A
Sbjct: 637 GRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLA- 695
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
+ GE +E + +F++M+++G K ++VT + V
Sbjct: 696 ------------------------------QHGEGKETLQLFKQMKSLGIKPDKVTFIGV 725
Query: 253 LCACAHLGAL-EKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEA 300
L AC+H G + E K M D G+ + + L D + G +++A
Sbjct: 726 LSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQA 774
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 156/364 (42%), Gaps = 47/364 (12%)
Query: 31 KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYS 90
K HA ++T + + I+ ++ S S G + Y+ R F ++ + WN+I+ Y+
Sbjct: 59 KCTHARILTFEENPERFLINNLI--SMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYA 116
Query: 91 NSK----NPIQSLSIFLKMLRHGLA-PDYLTYPFLAKASARLLNQETGVSVHAHIIKTGH 145
S IQ + ++LR + +T + K S H + K G
Sbjct: 117 QSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGL 176
Query: 146 EYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCG----------- 194
+ D F+ +L+++Y G + +F+ + +++V WN ML Y + G
Sbjct: 177 DGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSA 236
Query: 195 ---------EMVL------------AHKVFESMSERDVRSWSSLI------DGYVKAGEY 227
E+ L A +V + D S S +I Y+ +G+Y
Sbjct: 237 FHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQY 296
Query: 228 REAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSL 287
+ F M + ++VT + +L + +L G+ +H + GL L L + SL
Sbjct: 297 SALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSL 356
Query: 288 VDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKA 347
++MY K A VF +S+R D++ WN++I G+A +G E++ LF + G+K
Sbjct: 357 INMYCKLRKFGFARTVFDNMSER--DLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKP 414
Query: 348 DEVT 351
D+ T
Sbjct: 415 DQYT 418
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 28/219 (12%)
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G HA I+ +RF+ N+LI MY+ CG++ +A +VFD + +++LVSWNS+L YA+
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
E V+ + ++A +F +R + +T+ +
Sbjct: 118 SSECVVEN--------------------------IQQAFLLFRILRQDVVYTSRMTLSPM 151
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT 312
L C H G + + H Y GL + +LV++Y K G ++E ++F + R
Sbjct: 152 LKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-- 209
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVT 351
DV++WN M+ G EE++ L + G+ +E+T
Sbjct: 210 DVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT 248
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 151/363 (41%), Gaps = 38/363 (10%)
Query: 75 SSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGV 134
S I N + Y +S L F M+ + D +T+ + + ++ + G
Sbjct: 276 SVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQ 335
Query: 135 SVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCG 194
VH +K G + + NSLI+MY K
Sbjct: 336 QVHCMALKLGLDLMLTVSNSLINMYC-------------------------------KLR 364
Query: 195 EMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLC 254
+ A VF++MSERD+ SW+S+I G + G EA+ +F ++ G K ++ TM SVL
Sbjct: 365 KFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLK 424
Query: 255 ACAHLG-ALEKGKMMHKYIVD-NGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT 312
A + L L K +H + + N + + V T+L+D Y++ ++EA ++F +
Sbjct: 425 AASSLPEGLSLSKQVHVHAIKINNVSDSFV-STALIDAYSRNRCMKEAEILFE---RHNF 480
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFF 372
D++ WNAM+ G ++L LF M G ++D+ T + +
Sbjct: 481 DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVH 540
Query: 373 ESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNF 432
K G + ++D+ + G ++ A +P+ P ++SGCI +
Sbjct: 541 AYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGCIENGEE 599
Query: 433 ELA 435
E A
Sbjct: 600 ERA 602
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 152/505 (30%), Positives = 262/505 (51%), Gaps = 8/505 (1%)
Query: 25 KSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNT 84
+++ K LHA ++ G+ Q P + ++ + G ++ + F ++ W +
Sbjct: 17 RTLTTAKALHAHIVKLGIVQCCPLANTLV--NVYGKCGAASHALQVFDEMPHRDHIAWAS 74
Query: 85 IIRGYSNSKNPIQSLSIFLKMLRHG-LAPDYLTYPFLAKASARLLNQETGVSVHAHIIKT 143
++ + + ++LS+F + L PD + L KA A L + + G VH H I +
Sbjct: 75 VLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVS 134
Query: 144 GHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVF 203
+ D +++SL+ MYA CG + A VFDS++ KN +SW +M+ GYAK G A ++F
Sbjct: 135 EYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELF 194
Query: 204 ESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKA-NEVTMVSVLCACAHLGAL 262
+ +++ SW++LI G+V++G+ EA +VF +MR + + + S++ ACA+L A
Sbjct: 195 RILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAAS 254
Query: 263 EKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIG 322
G+ +H ++ G + + +L+DMYAKC + A +F + R DV+ W ++I
Sbjct: 255 IAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHR--DVVSWTSLIV 312
Query: 323 GLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDK-CGMT 381
G+A HG E++L L+ DM + G+K +EVT+ H G V++ F+S+ K G+
Sbjct: 313 GMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIR 372
Query: 382 PSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRK 441
PS +HY C++D+L R+G L A I MP P ALLS C ++ +
Sbjct: 373 PSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADH 432
Query: 442 LI-ELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFI 500
L+ + YI LSN+YA W R + V+K PG SSVE+ + F
Sbjct: 433 LVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFY 492
Query: 501 AHDKTHSDSEETYSMLNFVAYQMKL 525
A + +H E+ + +L + +M++
Sbjct: 493 AGETSHPLKEDIFRLLKKLEEEMRI 517
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 35/229 (15%)
Query: 110 LAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAH 169
L P YL L AR T ++HAHI+K G + N+L+++Y CG A
Sbjct: 2 LIPHYLHQLQLC---ARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHAL 58
Query: 170 KVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYRE 229
+VFD + ++ ++W S+L + +G+
Sbjct: 59 QVFDEMPHRDHIAWASVLTALNQAN----------------------------LSGKTLS 90
Query: 230 AMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVD 289
+ + P ++ +++ ACA+LG+++ G+ +H + + + V+++SLVD
Sbjct: 91 VFSSVGSSSGLRP--DDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVD 148
Query: 290 MYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFK 338
MYAKCG + A VF + R + + W AM+ G A G EE+L LF+
Sbjct: 149 MYAKCGLLNSAKAVFDSI--RVKNTISWTAMVSGYAKSGRKEEALELFR 195
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 153/506 (30%), Positives = 256/506 (50%), Gaps = 36/506 (7%)
Query: 16 TLLSLLDGCKSMLELK---QLHAILITSGLSQDEPFISKVL------------------- 53
TL ++L C + LK Q+HA ++ G+ D S ++
Sbjct: 189 TLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQI 248
Query: 54 ----------CFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFL 103
S +N G ++ S F + S+ + +WN++I GY + +++L +F
Sbjct: 249 REPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFN 308
Query: 104 KMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCG 163
+M R+ D T + A L ETG +H H K G D + ++L+ MY+ CG
Sbjct: 309 EM-RNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCG 367
Query: 164 NIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVK 223
+ + A K+F V+ + + NSM+ Y CG + A +VFE + + + SW+S+ +G+ +
Sbjct: 368 SPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQ 427
Query: 224 AGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVL 283
G E + F +M + +EV++ SV+ ACA + +LE G+ + GL V+
Sbjct: 428 NGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVV 487
Query: 284 QTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAV 343
+SL+D+Y KCG +E VF + K+D + WN+MI G AT+G E++ LFK M
Sbjct: 488 SSSLIDLYCKCGFVEHGRRVFDTMV--KSDEVPWNSMISGYATNGQGFEAIDLFKKMSVA 545
Query: 344 GIKADEVTYXXXXXXXXHGGLVKEAWHFFESLD-KCGMTPSSEHYACMVDVLARAGQLAT 402
GI+ ++T+ + GLV+E FES+ G P EH++CMVD+LARAG +
Sbjct: 546 GIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEE 605
Query: 403 AYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAG 462
A + +MP + SM ++L GC+ + + + K+IELEP++ Y+ LS ++A
Sbjct: 606 AINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFAT 665
Query: 463 VKRWDDARGMREAMERRGVKKSPGFS 488
W+ + +R+ M V K+PG S
Sbjct: 666 SGDWESSALVRKLMRENNVTKNPGSS 691
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 161/325 (49%), Gaps = 33/325 (10%)
Query: 56 SALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYL 115
S + +G++ + R F+ + + N+++ GY + ++L +F ++ + D +
Sbjct: 132 SGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAI 188
Query: 116 TYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSV 175
T + KA A L + G +HA I+ G E D + +SL+++YA CG++ A + + +
Sbjct: 189 TLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQI 248
Query: 176 QEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFE 235
+E + S ++++ GYA CG + + +F+ S R V W+S+I GY+ EA+ +F
Sbjct: 249 REPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFN 308
Query: 236 KMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCG 295
+MR + + T+ +V+ AC LG LE GK MH + GL +V+ ++L+DMY+KCG
Sbjct: 309 EMRN-ETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCG 367
Query: 296 AIEEALLVFHGVSKRKT-----------------------------DVLIWNAMIGGLAT 326
+ EA +F V T ++ WN+M G +
Sbjct: 368 SPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQ 427
Query: 327 HGSVEESLGLFKDMQAVGIKADEVT 351
+G E+L F M + + DEV+
Sbjct: 428 NGCTVETLEYFHQMHKLDLPTDEVS 452
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 111/188 (59%), Gaps = 5/188 (2%)
Query: 150 FIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSER 209
F N++I Y + G + + FD + E++ SWN ++ G+AK GE+ +A ++F +M E+
Sbjct: 94 FSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEK 153
Query: 210 DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMH 269
DV + +SL+ GY+ G EA+ +F+++ A+ +T+ +VL ACA L AL+ GK +H
Sbjct: 154 DVVTLNSLLHGYILNGYAEEALRLFKELNF---SADAITLTTVLKACAELEALKCGKQIH 210
Query: 270 KYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGS 329
I+ G+ + +SLV++YAKCG + A + + R+ D +A+I G A G
Sbjct: 211 AQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQI--REPDDHSLSALISGYANCGR 268
Query: 330 VEESLGLF 337
V ES GLF
Sbjct: 269 VNESRGLF 276
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 249 bits (635), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 130/363 (35%), Positives = 210/363 (57%), Gaps = 4/363 (1%)
Query: 145 HEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFE 204
H D I N+++ + G++ A ++FD + K +++W +M+ GY ++ A K+F+
Sbjct: 172 HVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFD 231
Query: 205 SMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGP-KANEVTMVSVLCACAHLGALE 263
+M ER++ SW+++I GY + + +E + +F++M+A ++VT++SVL A + GAL
Sbjct: 232 AMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALS 291
Query: 264 KGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGG 323
G+ H ++ L + + T+++DMY+KCG IE+A +F + +++ V WNAMI G
Sbjct: 292 LGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQ--VASWNAMIHG 349
Query: 324 LATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPS 383
A +G+ +L LF M + K DE+T HGGLV+E +F + + G+
Sbjct: 350 YALNGNARAALDLFVTMM-IEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAK 408
Query: 384 SEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLI 443
EHY CMVD+L RAG L A I MP EP +L + LS C +++ E AE + +K +
Sbjct: 409 IEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAV 468
Query: 444 ELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAHD 503
ELEP +DG Y+ L N+YA KRWDD ++ M + KK G S +EI + FI+ D
Sbjct: 469 ELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGD 528
Query: 504 KTH 506
TH
Sbjct: 529 TTH 531
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 188/418 (44%), Gaps = 51/418 (12%)
Query: 37 LITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSS-PRIFIWNTIIRGYSNSKNP 95
++ + + +K L SA ++ I Y+ + F Q F+ N++I+ Y ++
Sbjct: 1 MLRHAIETNVQIFTKFLVISA--SAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQY 58
Query: 96 IQSLSIFLKMLRHG-LAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNS 154
S +++ + + APD T+ L K+ + + G+ +H+ I + G D ++
Sbjct: 59 PDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTG 118
Query: 155 LIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSE-RDVRS 213
++ MYA G + A FD + ++ VSW +++ GY +CGE+ LA K+F+ M +DV
Sbjct: 119 VVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVI 178
Query: 214 WSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIV 273
+++++DG+VK+G+ A +F+ +M HK
Sbjct: 179 YNAMMDGFVKSGDMTSARRLFD------------------------------EMTHK--- 205
Query: 274 DNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEES 333
T++ T+++ Y I+ A +F + +R +++ WN MIGG + +E
Sbjct: 206 ------TVITWTTMIHGYCNIKDIDAARKLFDAMPER--NLVSWNTMIGGYCQNKQPQEG 257
Query: 334 LGLFKDMQA-VGIKADEVTYXXXXXXXXHGGLVK--EAWHFFESLDKCGMTPSSEHYACM 390
+ LF++MQA + D+VT G + E H F K + + +
Sbjct: 258 IRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKK--LDKKVKVCTAI 315
Query: 391 VDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPD 448
+D+ ++ G++ A + +MP + AS + +N ++ +IE +PD
Sbjct: 316 LDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEEKPD 373
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 123/299 (41%), Gaps = 68/299 (22%)
Query: 38 ITSGLSQDEPFISKVLCFSALSN----SGDIDYSYRAFSQLSSPRIFIWNTIIRGYSN-- 91
+ S L P + V+ ++A+ + SGD+ + R F +++ + W T+I GY N
Sbjct: 162 LASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIK 221
Query: 92 -----------------------------SKNPIQSLSIFLKM-LRHGLAPDYLTYPFLA 121
+K P + + +F +M L PD +T +
Sbjct: 222 DIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVL 281
Query: 122 KASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLV 181
A + G H + + + + +++ MY+ CG I A ++FD + EK +
Sbjct: 282 PAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVA 341
Query: 182 SWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVG 241
SWN+M+ GYA G R A+ +F M +
Sbjct: 342 SWNAMIHGYA-------------------------------LNGNARAALDLFVTM-MIE 369
Query: 242 PKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEA 300
K +E+TM++V+ AC H G +E+G+ + + GL + +VD+ + G+++EA
Sbjct: 370 EKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEA 428
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 248 bits (634), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 144/465 (30%), Positives = 233/465 (50%), Gaps = 35/465 (7%)
Query: 62 GDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLR-HGLAPDYLTYPFL 120
G ++ + + F +++ + W ++ GY P ++L ++ M R P+ T
Sbjct: 165 GLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIA 224
Query: 121 AKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNL 180
A+A + G +H HI++ G + D
Sbjct: 225 VAAAAAVKCIRRGKEIHGHIVRAGLDSDE------------------------------- 253
Query: 181 VSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAV 240
V W+S++D Y KCG + A +F+ + E+DV SW+S+ID Y K+ +RE ++F ++
Sbjct: 254 VLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGS 313
Query: 241 GPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEA 300
+ NE T VL ACA L E GK +H Y+ G +SLVDMY KCG IE A
Sbjct: 314 CERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESA 373
Query: 301 LLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXX 360
V G K D++ W ++IGG A +G +E+L F + G K D VT+
Sbjct: 374 KHVVDGCPK--PDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACT 431
Query: 361 HGGLVKEAWHFFESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASML 419
H GLV++ FF S+ +K ++ +S+HY C+VD+LAR+G+ I +MPM+P+ +
Sbjct: 432 HAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLW 491
Query: 420 GALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERR 479
++L GC + N +LAE ++L ++EP++ Y+ ++N+YA +W++ MR+ M+
Sbjct: 492 ASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEI 551
Query: 480 GVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
GV K PG S EI FIA D +H + L + +MK
Sbjct: 552 GVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMK 596
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 163/325 (50%), Gaps = 4/325 (1%)
Query: 103 LKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASC 162
+++L P TY L + ++ E G VH HI +G I N L+ MYA C
Sbjct: 74 VQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKC 133
Query: 163 GNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYV 222
G++V A KVFD + ++L SWN M++GYA+ G + A K+F+ M+E+D SW++++ GYV
Sbjct: 134 GSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYV 193
Query: 223 KAGEYREAMAVFEKMRAVGPKANEVTMVSV-LCACAHLGALEKGKMMHKYIVDNGLPLTL 281
K + EA+ ++ M+ V + VS+ + A A + + +GK +H +IV GL
Sbjct: 194 KKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDE 253
Query: 282 VLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQ 341
VL +SL+DMY KCG I+EA +F + ++ DV+ W +MI E LF ++
Sbjct: 254 VLWSSLMDMYGKCGCIDEARNIFDKIVEK--DVVSWTSMIDRYFKSSRWREGFSLFSELV 311
Query: 342 AVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLA 401
+ +E T+ + + + G P S + +VD+ + G +
Sbjct: 312 GSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIE 371
Query: 402 TAYQFICQMPMEPTASMLGALLSGC 426
+A + P +P +L+ GC
Sbjct: 372 SAKHVVDGCP-KPDLVSWTSLIGGC 395
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 136/302 (45%), Gaps = 35/302 (11%)
Query: 31 KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYS 90
K++H ++ +GL DE S ++ G ID + F ++ + W ++I Y
Sbjct: 238 KEIHGHIVRAGLDSDEVLWSSLM--DMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYF 295
Query: 91 NSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRF 150
S + S+F +++ P+ T+ + A A L +E G VH ++ + G + F
Sbjct: 296 KSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSF 355
Query: 151 IQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERD 210
+SL+ MY CGNI A V D + +LVSW S
Sbjct: 356 ASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTS------------------------- 390
Query: 211 VRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKG-KMMH 269
LI G + G+ EA+ F+ + G K + VT V+VL AC H G +EKG + +
Sbjct: 391 ------LIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFY 444
Query: 270 KYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGS 329
+ L T T LVD+ A+ G E+ V + + + L W +++GG +T+G+
Sbjct: 445 SITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFL-WASVLGGCSTYGN 503
Query: 330 VE 331
++
Sbjct: 504 ID 505
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 248 bits (634), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 158/513 (30%), Positives = 255/513 (49%), Gaps = 42/513 (8%)
Query: 16 TLLSLLDGCKSMLELK---QLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
TLL +L + EL+ Q+H++ +G + ++ + S S G I F
Sbjct: 223 TLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFI--SLYSKCGKIKMGSALFR 280
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
+ P I +N +I GY+++ SLS+F +++ G A+ + L
Sbjct: 281 EFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSG-----------ARLRSSTLVSLV 329
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
VS H +I H Y N L H S ++ Y+K
Sbjct: 330 PVSGHLMLIYAIHGYC-LKSNFLSHASVS----------------------TALTTVYSK 366
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
E+ A K+F+ E+ + SW+++I GY + G +A+++F +M+ N VT+ +
Sbjct: 367 LNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCI 426
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT 312
L ACA LGAL GK +H + ++ + T+L+ MYAKCG+I EA +F ++K+
Sbjct: 427 LSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKK-- 484
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFF 372
+ + WN MI G HG +E+L +F +M GI VT+ H GLVKE F
Sbjct: 485 NEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIF 544
Query: 373 ESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRN 431
S+ + G PS +HYACMVD+L RAG L A QFI M +EP +S+ LL C H++
Sbjct: 545 NSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKD 604
Query: 432 FELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVE 491
LA V KL EL+PD+ G ++ LSN+++ + + A +R+ ++R + K+PG++ +E
Sbjct: 605 TNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIE 664
Query: 492 ICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
I F + D++H +E Y L + +M+
Sbjct: 665 IGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMR 697
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 152/334 (45%), Gaps = 37/334 (11%)
Query: 15 QTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQL 74
T L S+ L Q HA +I G D ++K+ LS+ G I Y+ F +
Sbjct: 21 NTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLT--QRLSDLGAIYYARDIFLSV 78
Query: 75 SSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRH-GLAPDYLTYPFLAKASARLLNQETG 133
P +F++N ++RG+S +++P SLS+F + + L P+ TY F A++ + G
Sbjct: 79 QRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAG 138
Query: 134 VSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKC 193
+H + G + + + ++++ MY + A KVFD + EK+ + WN+M+ GY K
Sbjct: 139 RVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRK- 197
Query: 194 GEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKM-RAVGPKANEVTMVSV 252
EM Y E++ VF + + + T++ +
Sbjct: 198 NEM------------------------------YVESIQVFRDLINESCTRLDTTTLLDI 227
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT 312
L A A L L G +H G + T + +Y+KCG I+ +F RK
Sbjct: 228 LPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREF--RKP 285
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIK 346
D++ +NAMI G ++G E SL LFK++ G +
Sbjct: 286 DIVAYNAMIHGYTSNGETELSLSLFKELMLSGAR 319
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 142/323 (43%), Gaps = 51/323 (15%)
Query: 14 NQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSAL----SNSGDIDYSYR 69
+ TL+SL+ ++ + +H + S F+S +AL S +I+ + +
Sbjct: 322 SSTLVSLVPVSGHLMLIYAIHGYCLKSN------FLSHASVSTALTTVYSKLNEIESARK 375
Query: 70 AFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLN 129
F + + WN +I GY+ + ++S+F +M + +P+ +T + A A+L
Sbjct: 376 LFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGA 435
Query: 130 QETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDG 189
G VH + T E ++ +LI MYA CG+I A ++FD + +KN V+WN+M+ G
Sbjct: 436 LSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISG 495
Query: 190 YAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTM 249
Y G+ +EA+ +F +M G VT
Sbjct: 496 YG-------------------------------LHGQGQEALNIFYEMLNSGITPTPVTF 524
Query: 250 VSVLCACAHLGALEKG-----KMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVF 304
+ VL AC+H G +++G M+H+Y G ++ +VD+ + G ++ AL
Sbjct: 525 LCVLYACSHAGLVKEGDEIFNSMIHRY----GFEPSVKHYACMVDILGRAGHLQRALQFI 580
Query: 305 HGVSKRKTDVLIWNAMIGGLATH 327
+S +W ++G H
Sbjct: 581 EAMSIEPGSS-VWETLLGACRIH 602
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 157/491 (31%), Positives = 246/491 (50%), Gaps = 44/491 (8%)
Query: 31 KQLHAILITSGLSQDEPFISKVLCFSAL----SNSGDIDYSYRAFSQLSSPRIFIWNTII 86
K++H + SG F S V +AL + G ++ + + F + + WN++I
Sbjct: 256 KEIHGYAMRSG------FDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMI 309
Query: 87 RGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHE 146
Y ++NP +++ IF KML G+ P ++ A A L + E G +H ++ G +
Sbjct: 310 DAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLD 369
Query: 147 YDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESM 206
+ + NSLI MY KC E+ A +F +
Sbjct: 370 RNVSVVNSLISMYC-------------------------------KCKEVDTAASMFGKL 398
Query: 207 SERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGK 266
R + SW+++I G+ + G +A+ F +MR+ K + T VSV+ A A L K
Sbjct: 399 QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 458
Query: 267 MMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLAT 326
+H ++ + L + + T+LVDMYAKCGAI A L+F +S+R V WNAMI G T
Sbjct: 459 WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERH--VTTWNAMIDGYGT 516
Query: 327 HGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWH-FFESLDKCGMTPSSE 385
HG + +L LF++MQ IK + VT+ H GLV+ F+ + + S +
Sbjct: 517 HGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMD 576
Query: 386 HYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIEL 445
HY MVD+L RAG+L A+ FI QMP++P ++ GA+L C H+N AE +L EL
Sbjct: 577 HYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFEL 636
Query: 446 EPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAHDKT 505
PD G ++ L+N+Y W+ +R +M R+G++K+PG S VEI F +
Sbjct: 637 NPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTA 696
Query: 506 HSDSEETYSML 516
H DS++ Y+ L
Sbjct: 697 HPDSKKIYAFL 707
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 118/480 (24%), Positives = 210/480 (43%), Gaps = 75/480 (15%)
Query: 20 LLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRI 79
LL+ C S+ EL+Q+ ++ +GL Q+ F +K++ S G +D + R F + S
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLV--SLFCRYGSVDEAARVFEPIDSKLN 100
Query: 80 FIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAH 139
+++T+++G++ + ++L F++M + P + +L K G +H
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 140 IIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLA 199
++K+G D F L +MYA C + A KVFD + E++LVSWN+++ GY++ G +A
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 200 HKVFESMSERDVRS---------------------------------------WSSLIDG 220
++ +SM E +++ ++L+D
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 221 YVKAGEYREA-------------------------------MAVFEKMRAVGPKANEVTM 249
Y K G A M +F+KM G K +V++
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340
Query: 250 VSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSK 309
+ L ACA LG LE+G+ +HK V+ GL + + SL+ MY KC ++ A +F +
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400
Query: 310 RKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAW 369
R ++ WNAMI G A +G ++L F M++ +K D TY + A
Sbjct: 401 RT--LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 458
Query: 370 HFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINH 429
+ + + + +VD+ A+ G + A + I M E + A++ G H
Sbjct: 459 WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTH 517
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 157/332 (47%), Gaps = 44/332 (13%)
Query: 3 GVSPSFKIANLNQTLLSLLDGCKSMLELKQ---LHAILITSGLSQDEPFISKVLCFSALS 59
GV P+ + +++ L C + +L++ +H + + GL ++ ++ ++ S
Sbjct: 332 GVKPT------DVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLI--SMYC 383
Query: 60 NSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPF 119
++D + F +L S + WN +I G++ + PI +L+ F +M + PD TY
Sbjct: 384 KCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVS 443
Query: 120 LAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKN 179
+ A A L +H ++++ + + F+ +L+ MYA CG I+ A +FD + E++
Sbjct: 444 VITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERH 503
Query: 180 LVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRA 239
+ +WN+M+DGY G+ KA A+ +FE+M+
Sbjct: 504 VTTWNAMIDGYGT--------------------------HGFGKA-----ALELFEEMQK 532
Query: 240 VGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDN-GLPLTLVLQTSLVDMYAKCGAIE 298
K N VT +SV+ AC+H G +E G + +N + L++ ++VD+ + G +
Sbjct: 533 GTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLN 592
Query: 299 EALLVFHGVSKRKTDVLIWNAMIGGLATHGSV 330
EA F K V ++ AM+G H +V
Sbjct: 593 EA-WDFIMQMPVKPAVNVYGAMLGACQIHKNV 623
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 151/500 (30%), Positives = 253/500 (50%), Gaps = 38/500 (7%)
Query: 30 LKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGY 89
LK+LH + +E + + ++ + G + Y+ R F + S + WN +I G+
Sbjct: 414 LKELHCYSLKQEFVYNELVANAFV--ASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGH 471
Query: 90 SNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDR 149
+ S +P SL L+M GL PD T L A ++L + G VH II+ E D
Sbjct: 472 AQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDL 531
Query: 150 FIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSER 209
F+ + S+L Y CGE+ +F++M ++
Sbjct: 532 FV-------------------------------YLSVLSLYIHCGELCTVQALFDAMEDK 560
Query: 210 DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMH 269
+ SW+++I GY++ G A+ VF +M G + ++M+ V AC+ L +L G+ H
Sbjct: 561 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 620
Query: 270 KYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGS 329
Y + + L + SL+DMYAK G+I ++ VF+G+ ++ T WNAMI G HG
Sbjct: 621 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS--WNAMIMGYGIHGL 678
Query: 330 VEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKC-GMTPSSEHYA 388
+E++ LF++MQ G D++T+ H GL+ E + + + G+ P+ +HYA
Sbjct: 679 AKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYA 738
Query: 389 CMVDVLARAGQLATAYQFIC-QMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEP 447
C++D+L RAGQL A + + +M E + +LLS C H+N E+ E V KL ELEP
Sbjct: 739 CVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEP 798
Query: 448 DHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAHDKTHS 507
+ Y+ LSN+YAG+ +W+D R +R+ M ++K G S +E+ F+ ++
Sbjct: 799 EKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLD 858
Query: 508 DSEETYSMLNFVAYQM-KLG 526
EE S+ + + ++ K+G
Sbjct: 859 GFEEIKSLWSILEMKISKMG 878
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 161/325 (49%), Gaps = 35/325 (10%)
Query: 31 KQLHAILITSG-LSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGY 89
+++H ++ S L D+ ++++ A+ G D S F L S +F WN +I Y
Sbjct: 104 RKIHQLVSGSTRLRNDDVLCTRIITMYAMC--GSPDDSRFVFDALRSKNLFQWNAVISSY 161
Query: 90 SNSKNPIQSLSIFLKMLRH-GLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYD 148
S ++ + L F++M+ L PD+ TYP + KA A + + G++VH ++KTG D
Sbjct: 162 SRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVED 221
Query: 149 RFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSE 208
F+ N+L+ Y + G + A ++FD + E+NLVSWNSM+ ++ G SE
Sbjct: 222 VFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNG-----------FSE 270
Query: 209 RDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMM 268
+ ++ GE E M V T+V+VL CA + GK +
Sbjct: 271 ----------ESFLLLGEMMEENGDGAFMPDVA------TLVTVLPVCAREREIGLGKGV 314
Query: 269 HKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHG 328
H + V L LVL +L+DMY+KCG I A ++F +V+ WN M+GG + G
Sbjct: 315 HGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFK--MNNNKNVVSWNTMVGGFSAEG 372
Query: 329 SVEESLGLFKDMQAVG--IKADEVT 351
+ + + M A G +KADEVT
Sbjct: 373 DTHGTFDVLRQMLAGGEDVKADEVT 397
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 142/323 (43%), Gaps = 37/323 (11%)
Query: 33 LHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNS 92
+H +++ +GL +D F+ L S G + + + F + + WN++IR +S++
Sbjct: 209 VHGLVVKTGLVED-VFVGNALV-SFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDN 266
Query: 93 KNPIQSLSIFLKMLRH----GLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYD 148
+S + +M+ PD T + AR G VH +K + +
Sbjct: 267 GFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKE 326
Query: 149 RFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSE 208
+ N+L+ MY+ CG I A +F KN+VSWN+M+ G++ G+ H F+ +
Sbjct: 327 LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGD---THGTFDVL-- 381
Query: 209 RDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMM 268
R+ +A E + KA+EVT+++ + C H L K +
Sbjct: 382 -------------------RQMLAGGEDV-----KADEVTILNAVPVCFHESFLPSLKEL 417
Query: 269 HKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHG 328
H Y + ++ + V YAKCG++ A VFHG+ R V WNA+IGG A
Sbjct: 418 HCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGI--RSKTVNSWNALIGGHAQSN 475
Query: 329 SVEESLGLFKDMQAVGIKADEVT 351
SL M+ G+ D T
Sbjct: 476 DPRLSLDAHLQMKISGLLPDSFT 498
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 152/515 (29%), Positives = 248/515 (48%), Gaps = 40/515 (7%)
Query: 16 TLLSLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
TL S+ C + L KQLH+ I SGL D S V ++ S G +D + F
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVE-CSLVDMYAKCSADGSVDDCRKVFD 329
Query: 73 QLSSPRIFIWNTIIRGYSNSKN-PIQSLSIFLKMLRHG-LAPDYLTYPFLAKASARLLNQ 130
++ + W +I GY + N +++++F +M+ G + P++ T+ KA L +
Sbjct: 330 RMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP 389
Query: 131 ETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGY 190
G V K G + + NS+I M+
Sbjct: 390 RVGKQVLGQAFKRGLASNSSVANSVISMFV------------------------------ 419
Query: 191 AKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMV 250
K M A + FES+SE+++ S+++ +DG + + +A + ++ + T
Sbjct: 420 -KSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFA 478
Query: 251 SVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR 310
S+L A++G++ KG+ +H +V GL + +L+ MY+KCG+I+ A VF+ + R
Sbjct: 479 SLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENR 538
Query: 311 KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWH 370
+V+ W +MI G A HG L F M G+K +EVTY H GLV E W
Sbjct: 539 --NVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWR 596
Query: 371 FFESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINH 429
F S+ + + P EHYACMVD+L RAG L A++FI MP + + L C H
Sbjct: 597 HFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVH 656
Query: 430 RNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSS 489
N EL ++ RK++EL+P+ YI LSN+YA +W+++ MR M+ R + K G S
Sbjct: 657 SNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSW 716
Query: 490 VEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
+E+ +F D H ++ + Y L+ + ++K
Sbjct: 717 IEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIK 751
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 190/444 (42%), Gaps = 54/444 (12%)
Query: 16 TLLSLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSALSNSGD---IDYSYR 69
T SLL C + K +HA LI + D + ++ S S SGD + +
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI--SLYSKSGDSAKAEDVFE 121
Query: 70 AFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLN 129
+ + W+ ++ Y N+ + ++ +F++ L GL P+ Y + +A +
Sbjct: 122 TMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDF 181
Query: 130 QETGVSVHAHIIKTGH-EYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLD 188
G ++KTGH E D + SLI M+ V F++
Sbjct: 182 VGVGRVTLGFLMKTGHFESDVCVGCSLIDMF------VKGENSFEN-------------- 221
Query: 189 GYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVT 248
A+KVF+ MSE +V +W+ +I ++ G REA+ F M G ++++ T
Sbjct: 222 ----------AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271
Query: 249 MVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKC---GAIEEALLVFH 305
+ SV ACA L L GK +H + + +GL ++ SLVDMYAKC G++++ VF
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFD 329
Query: 306 GVSKRKTDVLIWNAMIGGLATHGSV-EESLGLFKDMQAVG-IKADEVTYXXXXXXXXHGG 363
+ V+ W A+I G + ++ E++ LF +M G ++ + T+ +
Sbjct: 330 RMEDHS--VMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLS 387
Query: 364 LVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALL 423
+ K G+ +S ++ + ++ ++ A + + E L
Sbjct: 388 DPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLS-EKNLVSYNTFL 446
Query: 424 SGCINHRNFE-----LAEIVGRKL 442
G + NFE L+EI R+L
Sbjct: 447 DGTCRNLNFEQAFKLLSEITEREL 470
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 71/138 (51%), Gaps = 2/138 (1%)
Query: 217 LIDGYVKAGEYREAMAVFEKMRAVGPKA-NEVTMVSVLCACAHLGALEKGKMMHKYIVDN 275
LI ++ AG+ R A++ + M G + + VT S+L +C GK++H +++
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 276 GLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSK-RKTDVLIWNAMIGGLATHGSVEESL 334
+ VL SL+ +Y+K G +A VF + + K DV+ W+AM+ +G +++
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 335 GLFKDMQAVGIKADEVTY 352
+F + +G+ ++ Y
Sbjct: 152 KVFVEFLELGLVPNDYCY 169
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 136/305 (44%), Gaps = 31/305 (10%)
Query: 16 TLLSLLDGCKSMLELK---QLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
T SLL G ++ ++ Q+H+ ++ GLS ++P + ++ S S G ID + R F+
Sbjct: 476 TFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALI--SMYSKCGSIDTASRVFN 533
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
+ + + W ++I G++ I+ L F +M+ G+ P+ +TY + A + +
Sbjct: 534 FMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSE 593
Query: 133 GVSVHAHIIKTGHEYDRFIQN--SLIHMYASCGNIVWAHKVFDSVQ-EKNLVSWNSMLDG 189
G H + + H+ +++ ++ + G + A + +++ + +++ W + L
Sbjct: 594 GWR-HFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGA 652
Query: 190 -----YAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKA 244
+ G++ A K+ E + + ++ L + Y AG++ E+ + KM+
Sbjct: 653 CRVHSNTELGKLA-ARKILE-LDPNEPAAYIQLSNIYACAGKWEESTEMRRKMK------ 704
Query: 245 NEVTMVSVLCACAHLGALEKGKMMHK-YIVDNGLPLTLVLQTS---LVDMYAKCGAIEEA 300
E +V +E G +HK Y+ D P + L+ +CG + +
Sbjct: 705 -ERNLVKE----GGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDT 759
Query: 301 LLVFH 305
LV H
Sbjct: 760 DLVLH 764
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 156/541 (28%), Positives = 267/541 (49%), Gaps = 49/541 (9%)
Query: 31 KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYS 90
+ H +I GL ++ ++++L + +G + +Y F ++ WN +I+G+S
Sbjct: 178 RAFHTQVIQIGLKENLHVVNELL--TLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFS 235
Query: 91 NSKNPIQSLSIFLKMLRHGLAPDYLT-------------------YPFLAKASARLLNQE 131
+ ++ IF M R PD +T Y L + S ++ E
Sbjct: 236 QEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGE 295
Query: 132 T----------------GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSV 175
VH ++IK G E +N+LIH+Y G + A +F +
Sbjct: 296 ALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQI 355
Query: 176 QEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSE--------RDVRSWSSLIDGYVKAGEY 227
+ K + SWNS++ + G++ A +F + E +V +W+S+I G G
Sbjct: 356 RNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRG 415
Query: 228 REAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSL 287
+++ F +M+ AN VT+ +L CA L AL G+ +H +++ + +++Q +L
Sbjct: 416 DDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNAL 475
Query: 288 VDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKA 347
V+MYAKCG + E LVF + R D++ WN++I G HG E++L +F M + G
Sbjct: 476 VNMYAKCGLLSEGSLVFEAI--RDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHP 533
Query: 348 DEVTYXXXXXXXXHGGLVKEAWHFFESLDK-CGMTPSSEHYACMVDVLARAGQLATAYQF 406
D + H GLV++ F S+ K G+ P EHYAC+VD+L R G L A +
Sbjct: 534 DGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEI 593
Query: 407 ICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRW 466
+ MPMEP +LGALL+ C H+N ++AE + +L LEP+ G Y+ LSN+Y+ RW
Sbjct: 594 VKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRW 653
Query: 467 DDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSML-NFVAYQMKL 525
+++ +R +++ +KK G S +E+ +F + S+ E Y +L + V++ +K
Sbjct: 654 EESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKK 713
Query: 526 G 526
G
Sbjct: 714 G 714
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 5/222 (2%)
Query: 185 SMLDGYAKCGEMVLAHKVFESMSE---RDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVG 241
+++ YA+ G ++ A VFE++S D+R W+S++ V G Y A+ ++ MR G
Sbjct: 94 NLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRG 153
Query: 242 PKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEAL 301
+ + +L AC +LG + H ++ GL L + L+ +Y K G + +A
Sbjct: 154 LTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAY 213
Query: 302 LVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXH 361
+F + R + + WN MI G + E ++ +F+ MQ K DEVT+
Sbjct: 214 NLFVEMPVR--NRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQ 271
Query: 362 GGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATA 403
G ++ +F + G S E A V A L+ A
Sbjct: 272 CGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIA 313
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 152/515 (29%), Positives = 261/515 (50%), Gaps = 45/515 (8%)
Query: 16 TLLSLLDGCKSMLELK---QLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
+ S++ C ++ EL+ QLH ++ G D+ + ++ A S + + R F
Sbjct: 297 SFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMV--AYSKCTAMLDALRLFK 354
Query: 73 QLSS-PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQE 131
++ + W +I G+ + +++ +F +M R G+ P+ TY + A + E
Sbjct: 355 EIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE 414
Query: 132 TGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYA 191
VHA ++KT +E + +L+ Y G + A KVF + +K++V+W++ML GYA
Sbjct: 415 ----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYA 470
Query: 192 KCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVS 251
+ GE A K+F GE + G K NE T S
Sbjct: 471 QTGETEAAIKMF---------------------GELTKG----------GIKPNEFTFSS 499
Query: 252 VLCACAHLGA-LEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR 310
+L CA A + +GK H + + + L +L + ++L+ MYAK G IE A VF +R
Sbjct: 500 ILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFK--RQR 557
Query: 311 KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWH 370
+ D++ WN+MI G A HG ++L +FK+M+ +K D VT+ H GLV+E
Sbjct: 558 EKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEK 617
Query: 371 FFESLDK-CGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINH 429
+F+ + + C + P+ EH +CMVD+ +RAGQL A + I MP +++ +L+ C H
Sbjct: 618 YFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVH 677
Query: 430 RNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSS 489
+ EL + K+I ++P+ Y+ LSN+YA W + +R+ M R VKK PG+S
Sbjct: 678 KKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSW 737
Query: 490 VEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
+E+ + F+A D++H ++ Y L ++ ++K
Sbjct: 738 IEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLK 772
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 155/327 (47%), Gaps = 44/327 (13%)
Query: 31 KQLHAILITSGLSQDEPF-ISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGY 89
+QLH I G D S V + SN D + F ++ + W T+I GY
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKD---GRKVFDEMKERNVVTWTTLISGY 169
Query: 90 SNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQE----TGVSVHAHIIKTGH 145
+ + + L++F++M G P+ T+ A+ +L +E G+ VH ++K G
Sbjct: 170 ARNSMNDEVLTLFMRMQNEGTQPNSFTFA----AALGVLAEEGVGGRGLQVHTVVVKNGL 225
Query: 146 EYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFES 205
+ + NSLI++Y CGN+ A +FD + K++V+WNSM+ GYA G
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG----------- 274
Query: 206 MSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKG 265
+D EA+ +F MR + +E + SV+ CA+L L
Sbjct: 275 ------------LD--------LEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFT 314
Query: 266 KMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLA 325
+ +H +V G ++T+L+ Y+KC A+ +AL +F + +V+ W AMI G
Sbjct: 315 EQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGC-VGNVVSWTAMISGFL 373
Query: 326 THGSVEESLGLFKDMQAVGIKADEVTY 352
+ EE++ LF +M+ G++ +E TY
Sbjct: 374 QNDGKEEAVDLFSEMKRKGVRPNEFTY 400
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 142/302 (47%), Gaps = 34/302 (11%)
Query: 51 KVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGL 110
++ CF +S+S + ++ F + + +++ G+S ++ +FL + R G+
Sbjct: 31 RIYCFGTVSSS-RLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGM 89
Query: 111 APDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHK 170
D + + K SA L ++ G +H IK G D + SL+ Y N K
Sbjct: 90 EMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRK 149
Query: 171 VFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREA 230
VFD ++E+N+V+W +++ GYA+ SM++ E
Sbjct: 150 VFDEMKERNVVTWTTLISGYAR-----------NSMND--------------------EV 178
Query: 231 MAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDM 290
+ +F +M+ G + N T + L A G +G +H +V NGL T+ + SL+++
Sbjct: 179 LTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINL 238
Query: 291 YAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEV 350
Y KCG + +A ++F + V+ WN+MI G A +G E+LG+F M+ ++ E
Sbjct: 239 YLKCGNVRKARILFDKTEVK--SVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSES 296
Query: 351 TY 352
++
Sbjct: 297 SF 298
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 155/477 (32%), Positives = 242/477 (50%), Gaps = 44/477 (9%)
Query: 31 KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYS 90
+ LHA L+TSG+++ +K++ F G + + + F ++ I +I +
Sbjct: 36 RVLHAHLVTSGIARLTRIAAKLVTFYV--ECGKVLDARKVFDEMPKRDISGCVVMIGACA 93
Query: 91 NSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRF 150
+ +SL F +M + GL D P L KAS LL++E G +H ++K +E D F
Sbjct: 94 RNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAF 153
Query: 151 IQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMS--- 207
I +SLI MY+ G + A KVF + E++LV +N+M+ GYA + A + + M
Sbjct: 154 IVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLG 213
Query: 208 ------------------------------------ERDVRSWSSLIDGYVKAGEYREAM 231
+ DV SW+S+I G V + +A
Sbjct: 214 IKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAF 273
Query: 232 AVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMY 291
F++M G N T++++L AC L ++ GK +H Y V GL ++++L+DMY
Sbjct: 274 DAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMY 333
Query: 292 AKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVT 351
KCG I EA+++F K+ T + +N+MI A HG ++++ LF M+A G K D +T
Sbjct: 334 GKCGFISEAMILFRKTPKKTT--VTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLT 391
Query: 352 YXXXXXXXXHGGLVKEAWHFFESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQM 410
+ H GL + F + +K + P EHYACMVD+L RAG+L AY+ I M
Sbjct: 392 FTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAM 451
Query: 411 PMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWD 467
MEP + GALL+ C NH N ELA I + L ELEP++ G + L+++YA W+
Sbjct: 452 RMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWE 508
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 128/297 (43%), Gaps = 36/297 (12%)
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G +HAH++ +G I L+ Y CG ++ A KVFD
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFD------------------- 75
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
M +RD+ +I + G Y+E++ F +M G K + + S+
Sbjct: 76 ------------EMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSL 123
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT 312
L A +L E GKM+H ++ + +SL+DMY+K G + A VF + ++
Sbjct: 124 LKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQ-- 181
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFF 372
D++++NAMI G A + +E+L L KDM+ +GIK D +T+ H ++
Sbjct: 182 DLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEIL 241
Query: 373 ESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQM---PMEPTASMLGALLSGC 426
E + G P + ++ L Q A+ QM + P ++ + LL C
Sbjct: 242 ELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPAC 298
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 264 KGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGG 323
+G+++H ++V +G+ + LV Y +CG + +A VF + KR D+ MIG
Sbjct: 34 RGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKR--DISGCVVMIGA 91
Query: 324 LATHGSVEESLGLFKDMQAVGIKAD 348
A +G +ESL F++M G+K D
Sbjct: 92 CARNGYYQESLDFFREMYKDGLKLD 116
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 174/588 (29%), Positives = 273/588 (46%), Gaps = 85/588 (14%)
Query: 11 ANLNQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRA 70
+L + L LL C S+ +L+Q+ A ++ + + I K + GD +YS
Sbjct: 34 GDLERDFLFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAV------ELGDFNYSSFL 87
Query: 71 FSQLSSPRIFIWNTIIRGYSNSKNPIQS-LSIFLKMLRHGLAPDYLTYPFLAKASARLLN 129
FS P + +N +IRG +N+ N ++ LS++ +M GL PD TY F+ A A+L
Sbjct: 88 FSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEE 147
Query: 130 QETGVSVHAHIIKTGHEYDRFIQ-------------------------------NSLIHM 158
G SVH+ + K G E D I NS+I
Sbjct: 148 IGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISG 207
Query: 159 YASCGNIVWAHKVFDSVQE-------KNLVSW---------------------------- 183
Y+ G A +F ++E + LVS
Sbjct: 208 YSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLS 267
Query: 184 ----NSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRA 239
+ ++ Y KCG++ A +VF M ++D +W+++I Y + G+ EA +F +M
Sbjct: 268 TFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEK 327
Query: 240 VGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEE 299
G + T+ +VL AC +GALE GK + + + L + + T LVDMY KCG +EE
Sbjct: 328 TGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEE 387
Query: 300 ALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXX 359
AL VF + + WNAMI A G +E+L LF M + ++T+
Sbjct: 388 ALRVFEAMPVKNEAT--WNAMITAYAHQGHAKEALLLFDRMS---VPPSDITFIGVLSAC 442
Query: 360 XHGGLVKEAWHFFESLDKC-GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASM 418
H GLV + +F + G+ P EHY ++D+L+RAG L A++F+ + P +P M
Sbjct: 443 VHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIM 502
Query: 419 LGALLSGCINHRNFELAEIVGRKLIEL-EPDHDGRYIGLSNVYAGVKRWDDARGMREAME 477
L A+L C ++ + E R L+E+ E + G Y+ SNV A +K WD++ MR M
Sbjct: 503 LAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMR 562
Query: 478 RRGVKKSPGFSSVEICGVSRRFIA-HDKTHSDSEETYSMLNFVAYQMK 524
RGV K+PG S +EI G F+A D E++ S+ + + +MK
Sbjct: 563 DRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSLFDLLVEEMK 610
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 149/491 (30%), Positives = 248/491 (50%), Gaps = 41/491 (8%)
Query: 31 KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYS 90
+QLHA+ +T+G S+D +++L F S + + F ++ +N +I YS
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDF--YSKHDRVLETRMLFDEMPELDFVSYNVVISSYS 327
Query: 91 NSKNPIQSLSIFLKMLRHGLAPDYLTYPF--LAKASARLLNQETGVSVHAHIIKTGHEYD 148
+ SL F +M G D +PF + +A L + + G +H +
Sbjct: 328 QADQYEASLHFFREMQCMGF--DRRNFPFATMLSIAANLSSLQMGRQLHCQALLA----- 380
Query: 149 RFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSE 208
+S++H+ NS++D YAKC A +F+S+ +
Sbjct: 381 --TADSILHV------------------------GNSLVDMYAKCEMFEEAELIFKSLPQ 414
Query: 209 RDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMM 268
R SW++LI GYV+ G + + +F KMR +A++ T +VL A A +L GK +
Sbjct: 415 RTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQL 474
Query: 269 HKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHG 328
H +I+ +G + + LVDMYAKCG+I++A+ VF + R + + WNA+I A +G
Sbjct: 475 HAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR--NAVSWNALISAHADNG 532
Query: 329 SVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKC-GMTPSSEHY 387
E ++G F M G++ D V+ H G V++ +F+++ G+TP +HY
Sbjct: 533 DGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHY 592
Query: 388 ACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEP 447
ACM+D+L R G+ A A + + +MP EP M ++L+ C H+N LAE KL +E
Sbjct: 593 ACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEK 652
Query: 448 DHD-GRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAHDKTH 506
D Y+ +SN+YA W+ R +++AM RG+KK P +S VE+ F ++D+TH
Sbjct: 653 LRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTH 712
Query: 507 SDSEETYSMLN 517
+ +E +N
Sbjct: 713 PNGDEIVRKIN 723
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 112/240 (46%), Gaps = 12/240 (5%)
Query: 123 ASARLLNQETGVS------VHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQ 176
A+ R L Q + + V A IIKTG + D N ++ G + A KV+D +
Sbjct: 16 ATLRQLRQPSPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMP 75
Query: 177 EKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEK 236
KN VS N+M+ G+ K G++ A +F++M +R V +W+ L+ Y + + EA +F +
Sbjct: 76 HKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQ 135
Query: 237 M--RAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTS--LVDMYA 292
M + + VT ++L C +H + V G L S L+ Y
Sbjct: 136 MCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYC 195
Query: 293 KCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
+ ++ A ++F + ++ D + +N +I G G ES+ LF M+ G + + T+
Sbjct: 196 EVRRLDLACVLFEEIPEK--DSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTF 253
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 122/287 (42%), Gaps = 33/287 (11%)
Query: 61 SGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHG--LAPDYLTYP 118
+GD+ + F + + W ++ Y+ + + ++ +F +M R PD++T+
Sbjct: 92 TGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFT 151
Query: 119 FLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK 178
L + Q VHA +K G + + F+ S
Sbjct: 152 TLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVS------------------------ 187
Query: 179 NLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMR 238
N +L Y + + LA +FE + E+D ++++LI GY K G Y E++ +F KMR
Sbjct: 188 -----NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMR 242
Query: 239 AVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIE 298
G + ++ T VL A L G+ +H V G + ++D Y+K +
Sbjct: 243 QSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVL 302
Query: 299 EALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGI 345
E ++F + + D + +N +I + E SL F++MQ +G
Sbjct: 303 ETRMLFDEMP--ELDFVSYNVVISSYSQADQYEASLHFFREMQCMGF 347
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 96/235 (40%), Gaps = 30/235 (12%)
Query: 26 SMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTI 85
S+L KQLHA +I SG E S + G I + + F ++ WN +
Sbjct: 467 SLLLGKQLHAFIIRSG--NLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNAL 524
Query: 86 IRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGH 145
I ++++ + ++ F KM+ GL PD S +L T S H ++ G
Sbjct: 525 ISAHADNGDGEAAIGAFAKMIESGLQPD----------SVSILGVLTACS-HCGFVEQGT 573
Query: 146 EYDRFIQN------------SLIHMYASCGNIVWAHKVFDSVQ-EKNLVSWNSMLDGYAK 192
EY + + ++ + G A K+ D + E + + W+S+L+
Sbjct: 574 EYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRI 633
Query: 193 CGEMVL----AHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPK 243
L A K+F RD ++ S+ + Y AGE+ + V + MR G K
Sbjct: 634 HKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIK 688
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 138/408 (33%), Positives = 225/408 (55%), Gaps = 8/408 (1%)
Query: 86 IRGYSNSKNPIQSLSIFLKMLRHGLAP-DYLTYPFLAKASARLLNQETGVSVHAHIIKTG 144
+ Y+N N Q+L++FL+M P D + K+ A G SVHAH +K+
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 145 HEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFE 204
+ F+ +L+ MY C ++ A K+FD + ++N V WN+M+ Y CG++ A +++E
Sbjct: 79 FLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYE 138
Query: 205 SMS-ERDVRSWSSLIDGYV--KAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGA 261
+M + S++++I G V + G YR A+ + KM K N +T+++++ AC+ +GA
Sbjct: 139 AMDVMPNESSFNAIIKGLVGTEDGSYR-AIEFYRKMIEFRFKPNLITLLALVSACSAIGA 197
Query: 262 LEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMI 321
K +H Y N + L++ LV+ Y +CG+I LVF + R DV+ W+++I
Sbjct: 198 FRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDR--DVVAWSSLI 255
Query: 322 GGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLD-KCGM 380
A HG E +L F++M+ + D++ + H GL EA +F+ + G+
Sbjct: 256 SAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGL 315
Query: 381 TPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGR 440
S +HY+C+VDVL+R G+ AY+ I MP +PTA GALL C N+ ELAEI R
Sbjct: 316 RASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAAR 375
Query: 441 KLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFS 488
+L+ +EP++ Y+ L +Y V R ++A +R M+ GVK SPG S
Sbjct: 376 ELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 151/474 (31%), Positives = 257/474 (54%), Gaps = 16/474 (3%)
Query: 56 SALSNSGDIDYSYRAFSQLSSPRI---FIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAP 112
+A GDID + F + +P + WNT+I GY+ + ++L + + M +GL
Sbjct: 201 AAYCREGDIDKALSVFWR--NPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKW 258
Query: 113 DYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVF 172
D ++ + + L + + G VHA ++K G ++F+ + ++ +Y CGN+ +A
Sbjct: 259 DEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAH 318
Query: 173 DSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMA 232
NL S +SM+ GY+ G+MV A ++F+S+SE+++ W+++ GY+ R+ +
Sbjct: 319 LLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLN---LRQPDS 375
Query: 233 VFEKMRA-VGPKAN---EVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLV 288
V E RA + + N + MVSVL AC+ +E GK +H + + G+ + L T+ V
Sbjct: 376 VLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFV 435
Query: 289 DMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKAD 348
DMY+KCG +E A +F +R D +++NAMI G A HG +S F+DM G K D
Sbjct: 436 DMYSKCGNVEYAERIFDSSFER--DTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPD 493
Query: 349 EVTYXXXXXXXXHGGLVKEAWHFFESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFI 407
E+T+ H GLV E +F+S+ + ++P + HY CM+D+ +A +L A + +
Sbjct: 494 EITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELM 553
Query: 408 CQM-PMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRW 466
+ +E A +LGA L+ C ++N EL + V KL+ +E + RYI ++N YA RW
Sbjct: 554 EGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRW 613
Query: 467 DDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVA 520
D+ + +R M + ++ G S I F + D +H ++E Y+ML+FV
Sbjct: 614 DEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAMLHFVT 667
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 114/477 (23%), Positives = 201/477 (42%), Gaps = 81/477 (16%)
Query: 79 IFIWNTIIRGYSNSKN-PIQSLSIFLKMLRH---GLAPDYLTYPFLAKASARLLNQETGV 134
+ +NT++ G++ + +++ +F +M R + D T + K SA+L N G
Sbjct: 86 LITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGE 145
Query: 135 SVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDS--VQEKNLVSWNSMLDGYAK 192
+H ++KTG++ +F +SLIHMY+ CG +F+ V+ + V+ N+M+ Y +
Sbjct: 146 QLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCR 205
Query: 193 CGEMVLAHKVFESMSE-RDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVS 251
G++ A VF E D SW++LI GY + G EA+ + M G K +E + +
Sbjct: 206 EGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGA 265
Query: 252 VLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIE------------- 298
VL + L +L+ GK +H ++ NG + + +VD+Y KCG ++
Sbjct: 266 VLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGN 325
Query: 299 ------------------EALLVFHGVSKRKTDVLIWNAMIGG----------------- 323
EA +F +S++ ++++W AM G
Sbjct: 326 LYSASSMIVGYSSQGKMVEAKRLFDSLSEK--NLVVWTAMFLGYLNLRQPDSVLELARAF 383
Query: 324 LATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLV---KEAWHFFESLDKCGM 380
+A + +SL + + A ++A G++ K F + KCG
Sbjct: 384 IANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGN 443
Query: 381 TPSSEH------------YACMVDVLARAGQLATAYQFICQMP---MEPTASMLGALLSG 425
+E Y M+ A G A ++Q M +P ALLS
Sbjct: 444 VEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSA 503
Query: 426 CINHRNFEL-AEIVGRKLIE---LEPDHDGRYIGLSNVYAGVKRWDDARGMREAMER 478
C HR L E + +IE + P+ G Y + ++Y R D A + E +++
Sbjct: 504 C-RHRGLVLEGEKYFKSMIEAYNISPE-TGHYTCMIDLYGKAYRLDKAIELMEGIDQ 558
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 130/264 (49%), Gaps = 8/264 (3%)
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEM 196
H IK+G N L+++Y+ G + A VFD + E+N+ SWN+++ Y K +
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 197 VLAHKVFESMS-ERDVRSWSSLIDGYVKA-GEYREAMAVFEKMRAVGPK---ANEVTMVS 251
A ++FES + ERD+ ++++L+ G+ K G EA+ +F +M ++ T+ +
Sbjct: 71 KEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTT 130
Query: 252 VLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRK 311
++ A L + G+ +H +V G T +SL+ MY+KCG +E +F+G
Sbjct: 131 MVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEF 190
Query: 312 TDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHF 371
D + NAMI G ++++L +F + D +++ G +EA
Sbjct: 191 VDSVARNAMIAAYCREGDIDKALSVFWRNPELN---DTISWNTLIAGYAQNGYEEEALKM 247
Query: 372 FESLDKCGMTPSSEHYACMVDVLA 395
S+++ G+ + +++VL+
Sbjct: 248 AVSMEENGLKWDEHSFGAVLNVLS 271
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 168/597 (28%), Positives = 284/597 (47%), Gaps = 82/597 (13%)
Query: 1 MPGVSPSFKIANLNQTLLSLLDGCK--SMLEL-KQLHAILITSGLSQDEPFISKVLCFSA 57
M G +P+ + T++S L C S +L K++HA ++ S E ++ L +
Sbjct: 277 MTGPAPN------SYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNAL-IAM 329
Query: 58 LSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTY 117
+ G + + R Q+++ + WN++I+GY + ++L F M+ G D ++
Sbjct: 330 YTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSM 389
Query: 118 PFLAKASARLLNQETGVSVHAHIIKTG-------------------------------HE 146
+ AS RL N G+ +HA++IK G H+
Sbjct: 390 TSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD 449
Query: 147 YDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNL-------------------------- 180
D ++I YA V A ++F V +K +
Sbjct: 450 KDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEI 509
Query: 181 ------------VSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYR 228
V N ++D Y KC M A +VFES+ +DV SW+S+I G
Sbjct: 510 HCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNES 569
Query: 229 EAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLV 288
EA+ +F +M G A+ V ++ +L A A L AL KG+ +H Y++ G L + ++V
Sbjct: 570 EAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVV 629
Query: 289 DMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKAD 348
DMYA CG ++ A VF + ++ +L + +MI HG + ++ LF M+ + D
Sbjct: 630 DMYACCGDLQSAKAVFDRIERK--GLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPD 687
Query: 349 EVTYXXXXXXXXHGGLVKEAWHFFESLD-KCGMTPSSEHYACMVDVLARAGQLATAYQFI 407
+++ H GL+ E F + ++ + + P EHY C+VD+L RA + A++F+
Sbjct: 688 HISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFV 747
Query: 408 CQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWD 467
M EPTA + ALL+ C +H E+ EI ++L+ELEP + G + +SNV+A RW+
Sbjct: 748 KMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWN 807
Query: 468 DARGMREAMERRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
D +R M+ G++K PG S +E+ G +F A DK+H +S+E Y L+ V +++
Sbjct: 808 DVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLE 864
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 164/337 (48%), Gaps = 36/337 (10%)
Query: 17 LLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSS 76
+L L +++ + +QLH+ + + S + F++ L F G +D + + F ++
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVF-MYGKCGSLDDAEKVFDEMPD 144
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
F WNT+I Y ++ P +L+++ M G+ ++P L KA A+L + +G +
Sbjct: 145 RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSEL 204
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK-NLVSWNSMLDGYAKCGE 195
H+ ++K G+ FI N+L+ MYA ++ A ++FD QEK + V WNS+L Y+ G+
Sbjct: 205 HSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGK 264
Query: 196 MVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCA 255
+ E + +F +M GP N T+VS L A
Sbjct: 265 SL-------------------------------ETLELFREMHMTGPAPNSYTIVSALTA 293
Query: 256 CAHLGALEKGKMMHKYIVDNGLPLT-LVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDV 314
C + GK +H ++ + + L + +L+ MY +CG + +A + ++ DV
Sbjct: 294 CDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN--NADV 351
Query: 315 LIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVT 351
+ WN++I G + +E+L F DM A G K+DEV+
Sbjct: 352 VTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVS 388
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 4/223 (1%)
Query: 190 YAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTM 249
Y KCG + A KVF+ M +R +W+++I YV GE A+A++ MR G +
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSF 185
Query: 250 VSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSK 309
++L ACA L + G +H +V G T + +LV MYAK + A +F G +
Sbjct: 186 PALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGF-Q 244
Query: 310 RKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAW 369
K D ++WN+++ +T G E+L LF++M G + T K
Sbjct: 245 EKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGK 304
Query: 370 HFFESLDKCGMTPSSEHYAC--MVDVLARAGQLATAYQFICQM 410
S+ K T SSE Y C ++ + R G++ A + + QM
Sbjct: 305 EIHASVLKSS-THSSELYVCNALIAMYTRCGKMPQAERILRQM 346
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 144/470 (30%), Positives = 235/470 (50%), Gaps = 36/470 (7%)
Query: 59 SNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYP 118
S G + S+ F + + WNT+I + + + L + +M + G DY+T
Sbjct: 364 SRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVT 423
Query: 119 FLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK 178
L A++ L N+E G HA +I+ G +++ + + LI MY+ G I + K+F+
Sbjct: 424 ALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEG---- 478
Query: 179 NLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMR 238
GYA ERD +W+S+I GY + G + VF KM
Sbjct: 479 ---------SGYA----------------ERDQATWNSMISGYTQNGHTEKTFLVFRKML 513
Query: 239 AVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIE 298
+ N VT+ S+L AC+ +G+++ GK +H + + L + + ++LVDMY+K GAI+
Sbjct: 514 EQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIK 573
Query: 299 EALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXX 358
A +F +R + + + MI G HG E ++ LF MQ GIK D +T+
Sbjct: 574 YAEDMFSQTKERNS--VTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSA 631
Query: 359 XXHGGLVKEAWHFFESLDKC-GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPT-A 416
+ GL+ E FE + + + PSSEHY C+ D+L R G++ AY+F+ + E A
Sbjct: 632 CSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIA 691
Query: 417 SMLGALLSGCINHRNFELAEIVGRKLIELE--PDHDGRYIGLSNVYAGVKRWDDARGMRE 474
+ G+LL C H ELAE V +L + + + G + LSN+YA ++W +R
Sbjct: 692 ELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRR 751
Query: 475 AMERRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
M +G+KK G S +EI G F++ D+ H S E Y +++ +A M+
Sbjct: 752 GMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMR 801
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 158/354 (44%), Gaps = 43/354 (12%)
Query: 62 GDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKML-RHGLAPDYLTYPFL 120
GDI+ S R F I +WNT+I Y + ++S+ +FL+ + + D +TY
Sbjct: 265 GDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLA 324
Query: 121 AKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNL 180
A A + L E G H + K E I NSL+ MY+
Sbjct: 325 ASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYS-------------------- 364
Query: 181 VSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAV 240
+CG + + VF SM ERDV SW+++I +V+ G E + + +M+
Sbjct: 365 -----------RCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 413
Query: 241 GPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEA 300
G K + +T+ ++L A ++L E GK H +++ G+ + + L+DMY+K G I +
Sbjct: 414 GFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRIS 472
Query: 301 LLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXX 360
+F G + D WN+MI G +G E++ +F+ M I+ + VT
Sbjct: 473 QKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACS 532
Query: 361 HGGLVK--EAWHFF---ESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQ 409
G V + H F + LD+ S+ +VD+ ++AG + A Q
Sbjct: 533 QIGSVDLGKQLHGFSIRQYLDQNVFVASA-----LVDMYSKAGAIKYAEDMFSQ 581
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 150/326 (46%), Gaps = 54/326 (16%)
Query: 42 LSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSI 101
L+ P I L S + G+ + + F + P +WNTII G+ + P ++L
Sbjct: 35 LTPQTPSIRSRL--SKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLF 92
Query: 102 FLKMLRHGLAP----DYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIH 157
+ +M + AP D TY KA A N + G +VH H+I+ R + NSL++
Sbjct: 93 YSRMKK--TAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMN 150
Query: 158 MYASCGNIV------WAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDV 211
MY SC N KVFD+++ KN+V+WN+++
Sbjct: 151 MYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLI------------------------ 186
Query: 212 RSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKY 271
SW YVK G EA F M + K + V+ V+V A + +++K + +
Sbjct: 187 -SW------YVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGL 239
Query: 272 IVDNGLPLT--LVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGS 329
++ G L + +S + MYA+ G IE + VF +R +V WN MIG +
Sbjct: 240 MLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEV--WNTMIGVYVQNDC 297
Query: 330 VEESLGLFKDMQAVGIK---ADEVTY 352
+ ES+ LF ++A+G K +DEVTY
Sbjct: 298 LVESIELF--LEAIGSKEIVSDEVTY 321
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 10/206 (4%)
Query: 182 SWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVG 241
S S L + G LA ++F+++ + W+++I G++ EA+ + +M+
Sbjct: 41 SIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTA 100
Query: 242 PKAN--EVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEE 299
P N T S L ACA L+ GK +H +++ + V+ SL++MY C +
Sbjct: 101 PFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPD 160
Query: 300 AL------LVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYX 353
VF + R+ +V+ WN +I G E+ F M + +K V++
Sbjct: 161 CFEYDVVRKVFDNM--RRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFV 218
Query: 354 XXXXXXXHGGLVKEAWHFFESLDKCG 379
+K+A F+ + K G
Sbjct: 219 NVFPAVSISRSIKKANVFYGLMLKLG 244
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 18/206 (8%)
Query: 16 TLLSLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
T+ S+L C + + KQLH I L Q+ F++ L S +G I Y+ FS
Sbjct: 523 TVASILPACSQIGSVDLGKQLHGFSIRQYLDQN-VFVASALV-DMYSKAGAIKYAEDMFS 580
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
Q + T+I GY +++S+FL M G+ PD +T+ + A + +
Sbjct: 581 QTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDE 640
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIH------MYASCGNIVWAHKVFDSVQEKNLVS--WN 184
G+ + + + + IQ S H M G + A++ + E+ ++ W
Sbjct: 641 GLKIFEEMREVYN-----IQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWG 695
Query: 185 SMLDGYAKCGEMVLAHKVFESMSERD 210
S+L GE+ LA V E +++ D
Sbjct: 696 SLLGSCKLHGELELAETVSERLAKFD 721
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 147/484 (30%), Positives = 232/484 (47%), Gaps = 41/484 (8%)
Query: 16 TLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSN----SGDIDYSYRAF 71
T++S+L C LK L L +++ K+ +AL N G +D + F
Sbjct: 220 TIVSMLPVCG---HLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVF 276
Query: 72 SQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQE 131
++ + W +I GY+ + +L + M G+ P+ +T L L
Sbjct: 277 DRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVN 336
Query: 132 TGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYA 191
G +H ++ D I+ SLI MYA
Sbjct: 337 DGKCLHGWAVRQQVYSDIIIETSLISMYA------------------------------- 365
Query: 192 KCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVS 251
KC + L +VF S+ WS++I G V+ +A+ +F++MR + N T+ S
Sbjct: 366 KCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNS 425
Query: 252 VLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR- 310
+L A A L L + +H Y+ G +L T LV +Y+KCG +E A +F+G+ ++
Sbjct: 426 LLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKH 485
Query: 311 -KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAW 369
DV++W A+I G HG +L +F +M G+ +E+T+ H GLV+E
Sbjct: 486 KSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGL 545
Query: 370 HFFE-SLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCIN 428
F L+ S HY C+VD+L RAG+L AY I +P EPT+++ GALL+ C+
Sbjct: 546 TLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVT 605
Query: 429 HRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFS 488
H N +L E+ KL ELEP++ G Y+ L+N+YA + RW D +R ME G++K PG S
Sbjct: 606 HENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHS 665
Query: 489 SVEI 492
++EI
Sbjct: 666 TIEI 669
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 172/343 (50%), Gaps = 46/343 (13%)
Query: 15 QTLLSLLDGCKSMLELKQLHAILITSGLSQDEPF----ISKVLCFSALSNSGDIDYSYRA 70
Q+LL+ +S+ + K LH +IT G ++ LC G I Y+ +
Sbjct: 19 QSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALC-------GHITYARKL 71
Query: 71 FSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGL--APDYLTYPFLAKASARLL 128
F ++ + +N +IR Y ++S+F++M+ G+ PD TYPF+AKA+ L
Sbjct: 72 FEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELK 131
Query: 129 NQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLD 188
+ + G+ VH I+++ D+++QN+L+ MY + G +
Sbjct: 132 SMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKV----------------------- 168
Query: 189 GYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVT 248
EM A VF+ M RDV SW+++I GY + G +A+ +F+ M + T
Sbjct: 169 ------EM--ARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHAT 220
Query: 249 MVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVS 308
+VS+L C HL LE G+ +HK + + L + ++ +LV+MY KCG ++EA VF +
Sbjct: 221 IVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME 280
Query: 309 KRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVT 351
+R DV+ W MI G G VE +L L + MQ G++ + VT
Sbjct: 281 RR--DVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVT 321
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 150/509 (29%), Positives = 240/509 (47%), Gaps = 75/509 (14%)
Query: 82 WNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHII 141
WN +R + +S+S++ MLR G +PD ++PF+ K+ A L +G +H H+
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 142 KTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVS--WNSMLDGYAKCGEMVLA 199
K G E + F+ +LI MY CG + A KVF+ + + +S +N+++ GY ++ A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 200 HKVFESMSE---------------------------------------RDVRSWSSLIDG 220
+F M E +V +S I
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 221 YVKAGEYREAMAVFEKM-------------------------------RAVGPKANEVTM 249
Y+K G +F++M ++ G + T+
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 250 VSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSK 309
VSVL +CAHLGA + G + K + NG + + + + MYA+CG + +A VF +
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV 320
Query: 310 RKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAW 369
+ ++ W AMIG HG E L LF DM GI+ D + H GL +
Sbjct: 321 K--SLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 378
Query: 370 HFFESLDK-CGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCIN 428
F ++ + + P EHY+C+VD+L RAG+L A +FI MP+EP ++ GALL C
Sbjct: 379 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKI 438
Query: 429 HRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFS 488
H+N ++AE+ K+IE EP++ G Y+ +SN+Y+ K + +R M R +K PG+S
Sbjct: 439 HKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYS 498
Query: 489 SVEICGVSRRFIAHDKTHSDSEETYSMLN 517
VE G F+A D++H +EE + ML+
Sbjct: 499 YVEHKGRVHLFLAGDRSHEQTEEVHRMLD 527
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 238 bits (608), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 156/510 (30%), Positives = 251/510 (49%), Gaps = 34/510 (6%)
Query: 17 LLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSS 76
LL+LLD LKQ+HA ++ GL Q E I + S+ ++ G + + R F L
Sbjct: 209 LLTLLDDPMFCNLLKQVHAKVLKLGL-QHEITICNAM-ISSYADCGSVSDAKRVFDGLGG 266
Query: 77 PRIFI-WNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVS 135
+ I WN++I G+S + + +F++M RH + D TY L A + +Q G S
Sbjct: 267 SKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKS 326
Query: 136 VHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGE 195
+H +IK G E N+LI MY G
Sbjct: 327 LHGMVIKKGLEQVTSATNALISMYIQ-----------------------------FPTGT 357
Query: 196 MVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCA 255
M A +FES+ +D+ SW+S+I G+ + G +A+ F +R+ K ++ ++L +
Sbjct: 358 MEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRS 417
Query: 256 CAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVL 315
C+ L L+ G+ +H +G + +SL+ MY+KCG IE A F +S + + V
Sbjct: 418 CSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTV- 476
Query: 316 IWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESL 375
WNAMI G A HG + SL LF M +K D VT+ H GL++E +
Sbjct: 477 AWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLM 536
Query: 376 DKC-GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFEL 434
+ + P EHYA VD+L RAG + A + I MP+ P +L L C E+
Sbjct: 537 EPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEM 596
Query: 435 AEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICG 494
A V L+E+EP+ Y+ LS++Y+ +K+W++ +++ M+ RGVKK PG+S +EI
Sbjct: 597 ATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRN 656
Query: 495 VSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
+ F A D+++ ++ Y M+ + +M+
Sbjct: 657 QVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 136/291 (46%), Gaps = 31/291 (10%)
Query: 62 GDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLA 121
G + Y+ F ++ WNT+I GY++ + +F M R G D ++ L
Sbjct: 49 GFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLL 108
Query: 122 KASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLV 181
K A + + G VH +IK G+E + ++ +SL+ MYA C + A + F + E N V
Sbjct: 109 KGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSV 168
Query: 182 SWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVG 241
SWN+++ G+ + RD+++ L+ G + E + A+ + G
Sbjct: 169 SWNALIAGFVQV---------------RDIKTAFWLL-GLM---EMKAAVTM-----DAG 204
Query: 242 PKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEAL 301
A +T++ C L K +H ++ GL + + +++ YA CG++ +A
Sbjct: 205 TFAPLLTLLDDPMFCNLL------KQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAK 258
Query: 302 LVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
VF G+ K D++ WN+MI G + H E + LF MQ ++ D TY
Sbjct: 259 RVFDGLGGSK-DLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTY 308
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 18/202 (8%)
Query: 150 FIQNSLIHMYA-SCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSE 208
F + SL H YA CG+I ++ N +LD Y K G + A+ +F+ M +
Sbjct: 16 FQKLSLTHCYAIKCGSI------------SDIYVSNRILDSYIKFGFLGYANMLFDEMPK 63
Query: 209 RDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMM 268
RD SW+++I GY G+ +A +F M+ G + + +L A + + G+ +
Sbjct: 64 RDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQV 123
Query: 269 HKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHG 328
H ++ G + + +SLVDMYAKC +E+A F +S+ + + WNA+I G
Sbjct: 124 HGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNS--VSWNALIAGFVQVR 181
Query: 329 SVEES---LGLFKDMQAVGIKA 347
++ + LGL + AV + A
Sbjct: 182 DIKTAFWLLGLMEMKAAVTMDA 203
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 238 bits (607), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 153/520 (29%), Positives = 256/520 (49%), Gaps = 45/520 (8%)
Query: 10 IANLNQ------TLLSLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSALSN 60
+ NL+Q T+ S+L C + +L K ++ ++ +G E + +L +
Sbjct: 297 LENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVL-ESTVRNIL-IDVYAK 354
Query: 61 SGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFL 120
GD+ + F+ + WN+II GY S + ++++ +F M+ D++TY L
Sbjct: 355 CGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLML 414
Query: 121 AKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNL 180
S RL + + G +H++ IK+G D + N+LI MY
Sbjct: 415 ISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMY--------------------- 453
Query: 181 VSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAV 240
AKCGE+ + K+F SM D +W+++I V+ G++ + V +MR
Sbjct: 454 ----------AKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKS 503
Query: 241 GPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEA 300
+ T + L CA L A GK +H ++ G L + +L++MY+KCG +E +
Sbjct: 504 EVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENS 563
Query: 301 LLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXX 360
VF +S+R DV+ W MI +G E++L F DM+ GI D V +
Sbjct: 564 SRVFERMSRR--DVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACS 621
Query: 361 HGGLVKEAWHFFESLDK-CGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASML 419
H GLV E FE + + P EHYAC+VD+L+R+ +++ A +FI MP++P AS+
Sbjct: 622 HSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIW 681
Query: 420 GALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERR 479
++L C + E AE V R++IEL PD G I SN YA +++WD +R++++ +
Sbjct: 682 ASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDK 741
Query: 480 GVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFV 519
+ K+PG+S +E+ F + D + SE Y L +
Sbjct: 742 HITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEIL 781
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 201/431 (46%), Gaps = 38/431 (8%)
Query: 21 LDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPR-I 79
L ++ EL+++HA++I+ GL + F K++ S+ + S F ++S + +
Sbjct: 14 LSSSSNLNELRRIHALVISLGLDSSDFFSGKLI--DKYSHFREPASSLSVFRRVSPAKNV 71
Query: 80 FIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAH 139
++WN+IIR +S + ++L + K+ ++PD T+P + KA A L + E G V+
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ 131
Query: 140 IIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLA 199
I+ G E D F+ N+L+ MY+ G + A +VFD + ++LVSWNS
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNS-------------- 177
Query: 200 HKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHL 259
LI GY G Y EA+ ++ +++ + T+ SVL A +L
Sbjct: 178 -----------------LISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNL 220
Query: 260 GALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNA 319
+++G+ +H + + +G+ +V+ LV MY K +A VF + R D + +N
Sbjct: 221 LVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVR--DSVSYNT 278
Query: 320 MIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCG 379
MI G VEES+ +F + K D +T H + A + + + K G
Sbjct: 279 MICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAG 337
Query: 380 MTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVG 439
S ++DV A+ G + TA M + T S +++SG I + A +
Sbjct: 338 FVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSW-NSIISGYIQSGDLMEAMKLF 396
Query: 440 RKLIELEPDHD 450
+ ++ +E D
Sbjct: 397 KMMMIMEEQAD 407
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 155/581 (26%), Positives = 269/581 (46%), Gaps = 80/581 (13%)
Query: 16 TLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVL-CFSALSNSGDIDYSYRAFSQL 74
TLL +L G + +L+ LH + G D ++ +L + + GD + F Q+
Sbjct: 149 TLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGD---AKDLFDQM 205
Query: 75 SSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGV 134
+ WNT+I GY++ N + L + +M GL PD T+ S + + E G
Sbjct: 206 EQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGR 265
Query: 135 SVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCG 194
+H I+KTG + D ++ +LI MY CG +++V +++ K++V W M+ G + G
Sbjct: 266 MLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLG 325
Query: 195 EMVLAHKVFESMSER---------------------------------------DVRSWS 215
A VF M + D + +
Sbjct: 326 RAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALN 385
Query: 216 SLIDGYVKAGEYREAMAVFEKMR--------------------------------AVGPK 243
SLI Y K G +++ +FE+M +
Sbjct: 386 SLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQ 445
Query: 244 ANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLV 303
+ T+VS+L AC+ GAL GK++H ++ + + ++ T+LVDMY+KCG +E A
Sbjct: 446 VDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRC 505
Query: 304 FHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGG 363
F +S + DV+ W +I G HG + +L ++ + G++ + V + H G
Sbjct: 506 FDSISWK--DVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNG 563
Query: 364 LVKEAWHFFESLDK-CGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGAL 422
+V++ F S+ + G+ P+ EH AC+VD+L RA ++ A++F + P+ +LG +
Sbjct: 564 MVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGII 623
Query: 423 LSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVK 482
L C + E+ +I+ +IEL+P G Y+ L + +A +KRWDD M G+K
Sbjct: 624 LDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLK 683
Query: 483 KSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQM 523
K PG+S +E+ G + F + +HSD +T S+L ++ +M
Sbjct: 684 KLPGWSKIEMNGKTTTFFMNHTSHSD--DTVSLLKLLSREM 722
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 139/284 (48%), Gaps = 38/284 (13%)
Query: 69 RAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLL 128
R S L+S + F N+ I S+ + Q LS F ML + L PD T+P L KA A L
Sbjct: 3 RTSSVLNSTKYF--NSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQ 60
Query: 129 NQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLD 188
G+S+H ++ G D +I +SL+++YA G + A KVF+ ++E+++V W +M+
Sbjct: 61 RLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIG 120
Query: 189 GYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVT 248
Y+ +AG EA ++ +MR G K VT
Sbjct: 121 CYS-------------------------------RAGIVGEACSLVNEMRFQGIKPGPVT 149
Query: 249 MVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVS 308
++ +L + L+ +H + V G + + S++++Y KC + +A +F +
Sbjct: 150 LLEMLSGVLEITQLQ---CLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQME 206
Query: 309 KRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
+R D++ WN MI G A+ G++ E L L M+ G++ D+ T+
Sbjct: 207 QR--DMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTF 248
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 152/332 (45%), Gaps = 41/332 (12%)
Query: 16 TLLSLLDGCKSMLELK---QLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
T SLL C S+ L +H ++ +G S D +IS L + + G + ++ + F
Sbjct: 48 TFPSLLKACASLQRLSFGLSIHQQVLVNGFSSD-FYISSSL-VNLYAKFGLLAHARKVFE 105
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
++ + W +I YS + ++ S+ +M G+ P +T LL +
Sbjct: 106 EMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVT----------LLEMLS 155
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
GV Q +H +A +++ FD ++ NSML+ Y K
Sbjct: 156 GVL-------------EITQLQCLHDFA----VIYG---FDC----DIAVMNSMLNLYCK 191
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
C + A +F+ M +RD+ SW+++I GY G E + + +MR G + ++ T +
Sbjct: 192 CDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGAS 251
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT 312
L + LE G+M+H IV G + + L+T+L+ MY KCG E + V + +
Sbjct: 252 LSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK-- 309
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDMQAVG 344
DV+ W MI GL G E++L +F +M G
Sbjct: 310 DVVCWTVMISGLMRLGRAEKALIVFSEMLQSG 341
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 139/450 (30%), Positives = 233/450 (51%), Gaps = 43/450 (9%)
Query: 45 DEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLK 104
D+ I++ L G +D + F ++S + W T++ GY + + IF
Sbjct: 169 DKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIF-- 226
Query: 105 MLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGN 164
++ ++T VS S++ Y G
Sbjct: 227 ---------------------DVMPEKTEVS----------------WTSMLMGYVQNGR 249
Query: 165 IVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKA 224
I A ++F+ + K +++ N+M+ G + GE+ A +VF+SM ER+ SW ++I + +
Sbjct: 250 IEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERN 309
Query: 225 GEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQ 284
G EA+ +F M+ G + T++S+L CA L +L GK +H +V + + +
Sbjct: 310 GFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVA 369
Query: 285 TSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVG 344
+ L+ MY KCG + ++ L+F + D+++WN++I G A+HG EE+L +F +M G
Sbjct: 370 SVLMTMYIKCGELVKSKLIFDRFPSK--DIIMWNSIISGYASHGLGEEALKVFCEMPLSG 427
Query: 345 -IKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKC-GMTPSSEHYACMVDVLARAGQLAT 402
K +EVT+ + G+V+E +ES++ G+ P + HYACMVD+L RAG+
Sbjct: 428 STKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNE 487
Query: 403 AYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAG 462
A + I M +EP A++ G+LL C H ++AE +KLIE+EP++ G YI LSN+YA
Sbjct: 488 AMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYAS 547
Query: 463 VKRWDDARGMREAMERRGVKKSPGFSSVEI 492
RW D +R+ M+ R V+KSPG S E+
Sbjct: 548 QGRWADVAELRKLMKTRLVRKSPGCSWTEV 577
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 134/270 (49%), Gaps = 26/270 (9%)
Query: 168 AHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEY 227
A K+FD + ++N++SWN ++ GY K GE+ A KVF+ M ER+V SW++L+ GYV G+
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKV 126
Query: 228 REAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSL 287
A ++F KM P+ N+V+ +L G ++ +++ I D + +TS+
Sbjct: 127 DVAESLFWKM----PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKD----NIARTSM 178
Query: 288 VDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKA 347
+ K G ++EA +F +S+R V+ W M+ G + V+++ +F M +
Sbjct: 179 IHGLCKEGRVDEAREIFDEMSERS--VITWTTMVTGYGQNNRVDDARKIFDVMP----EK 232
Query: 348 DEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYAC--MVDVLARAGQLATAYQ 405
EV++ G +++A FE + P AC M+ L + G++A A +
Sbjct: 233 TEVSWTSMLMGYVQNGRIEDAEELFEVM------PVKPVIACNAMISGLGQKGEIAKARR 286
Query: 406 FICQMPMEPTASMLGALLSGCINHRN-FEL 434
M AS + I+ RN FEL
Sbjct: 287 VFDSMKERNDASWQTVIK---IHERNGFEL 313
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 177/418 (42%), Gaps = 60/418 (14%)
Query: 36 ILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNP 95
IL+ S P + + + LS G I + + F S I WN+++ GY + P
Sbjct: 5 ILLRRTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMP 64
Query: 96 IQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSL 155
+ +F +M PD +II N L
Sbjct: 65 RDARKLFDEM------PD------------------------RNIIS---------WNGL 85
Query: 156 IHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWS 215
+ Y G I A KVFD + E+N+VSW +++ GY G++ +A +F M E++ SW+
Sbjct: 86 VSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWT 145
Query: 216 SLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDN 275
++ G+++ G +A ++E + P + + S++ G +++ + I D
Sbjct: 146 VMLIGFLQDGRIDDACKLYEMI----PDKDNIARTSMIHGLCKEGRVDEA----REIFDE 197
Query: 276 GLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLG 335
+++ T++V Y + +++A +F V KT+V W +M+ G +G +E++
Sbjct: 198 MSERSVITWTTMVTGYGQNNRVDDARKIF-DVMPEKTEVS-WTSMLMGYVQNGRIEDAEE 255
Query: 336 LFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLA 395
LF+ M + + G + +A F+S+ + + + ++ +
Sbjct: 256 LFEVMPVKPV----IACNAMISGLGQKGEIAKARRVFDSMKE----RNDASWQTVIKIHE 307
Query: 396 RAG-QLATAYQFIC--QMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHD 450
R G +L FI + + PT L ++LS C + + + V +L+ + D D
Sbjct: 308 RNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVD 365
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 157/571 (27%), Positives = 276/571 (48%), Gaps = 81/571 (14%)
Query: 23 GCKSMLELKQLHAILITSGLSQDEPFISKV-LCFSALSNSGDIDYSYRA---FSQLSSPR 78
G S+ E K++HA++I G F+S V +C S +S + ++ A F ++
Sbjct: 142 GISSLEEGKKIHAMVIKLG------FVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERD 195
Query: 79 IFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHA 138
I WN++I GY + SL +F +ML+ G PD + A + + + + G +H
Sbjct: 196 IVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHC 255
Query: 139 HIIKTGHE--------------------------YDRFIQ------NSLIHMYASCGNIV 166
H +++ E ++ IQ N +I YA G +
Sbjct: 256 HAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVT 315
Query: 167 WAHKVFDSVQEKN------------------------------------LVSWNSMLDGY 190
A F + E+N +V +++D Y
Sbjct: 316 DAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMY 375
Query: 191 AKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMV 250
+CG++ A +F+ M+E++V SW+S+I YV+ G+ A+ +F+++ + T+
Sbjct: 376 GECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIA 435
Query: 251 SVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR 310
S+L A A +L +G+ +H YIV + ++ SLV MYA CG +E+A F+ + +
Sbjct: 436 SILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLK 495
Query: 311 KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWH 370
DV+ WN++I A HG S+ LF +M A + ++ T+ G+V E W
Sbjct: 496 --DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWE 553
Query: 371 FFESLDK-CGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINH 429
+FES+ + G+ P EHY CM+D++ R G + A +F+ +MP PTA + G+LL+ NH
Sbjct: 554 YFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNH 613
Query: 430 RNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSS 489
++ +AE ++ ++E D+ G Y+ L N+YA RW+D ++ ME +G+ ++ S+
Sbjct: 614 KDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRST 673
Query: 490 VEICGVSRRFIAHDKTHSDSEETYSMLNFVA 520
VE G S F D++H + + Y +L+ V+
Sbjct: 674 VEAKGKSHVFTNGDRSHVATNKIYEVLDVVS 704
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 193/395 (48%), Gaps = 41/395 (10%)
Query: 45 DEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLK 104
++P +++ L ++S ++ + + F +++ F+WN +I+G+++ I+++ + +
Sbjct: 63 NDPALTRAL--RGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSR 120
Query: 105 MLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGN 164
M+ G+ D TYPF+ K+ A + + E G +HA +IK G D ++ NSLI +Y G
Sbjct: 121 MVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGC 180
Query: 165 IVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKA 224
A KVF+ + E+++VSWNSM+ GY G DG+
Sbjct: 181 AWDAEKVFEEMPERDIVSWNSMISGYLALG------------------------DGF--- 213
Query: 225 GEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPL-TLVL 283
++ +F++M G K + + +S L AC+H+ + + GK +H + V + + +++
Sbjct: 214 ----SSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMV 269
Query: 284 QTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDM-QA 342
TS++DMY+K G + A +F+G+ +R +++ WN MIG A +G V ++ F+ M +
Sbjct: 270 MTSILDMYSKYGEVSYAERIFNGMIQR--NIVAWNVMIGCYARNGRVTDAFLCFQKMSEQ 327
Query: 343 VGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLAT 402
G++ D +T + E + G P ++D+ GQL +
Sbjct: 328 NGLQPDVIT----SINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKS 383
Query: 403 AYQFICQMPMEPTASMLGALLSGCINHRNFELAEI 437
A +M + S + + N +N+ E+
Sbjct: 384 AEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALEL 418
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/502 (29%), Positives = 245/502 (48%), Gaps = 39/502 (7%)
Query: 16 TLLSLLDGCKSM--LEL-KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
T S+L C + LEL +Q+H+ +I + Q ++ VL + G +D ++
Sbjct: 492 TYPSILKTCIRLGDLELGEQIHSQIIKTNF-QLNAYVCSVL-IDMYAKLGKLDTAWDILI 549
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
+ + + W T+I GY+ ++L+ F +ML G+ D + A A L +
Sbjct: 550 RFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKE 609
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G +HA +G D QN+L+ +Y+ +
Sbjct: 610 GQQIHAQACVSGFSSDLPFQNALVTLYS-------------------------------R 638
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
CG++ ++ FE D +W++L+ G+ ++G EA+ VF +M G N T S
Sbjct: 639 CGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSA 698
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT 312
+ A + +++GK +H I G + +L+ MYAKCG+I +A F VS +
Sbjct: 699 VKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNE 758
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFF 372
+ WNA+I + HG E+L F M ++ + VT H GLV + +F
Sbjct: 759 --VSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYF 816
Query: 373 ESLD-KCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRN 431
ES++ + G++P EHY C+VD+L RAG L+ A +FI +MP++P A + LLS C+ H+N
Sbjct: 817 ESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKN 876
Query: 432 FELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVE 491
E+ E L+ELEP+ Y+ LSN+YA K+WD R+ M+ +GVKK PG S +E
Sbjct: 877 MEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIE 936
Query: 492 ICGVSRRFIAHDKTHSDSEETY 513
+ F D+ H ++E +
Sbjct: 937 VKNSIHSFYVGDQNHPLADEIH 958
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 172/393 (43%), Gaps = 38/393 (9%)
Query: 14 NQTLLSLLDGCK---SMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRA 70
+ TL SL+ C ++ +QLHA G + + +L A DI+ +
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYA--KCADIETALDY 446
Query: 71 FSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQ 130
F + + +WN ++ Y + S IF +M + P+ TYP + K RL +
Sbjct: 447 FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 506
Query: 131 ETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGY 190
E G +H+ IIKT + + ++ + LI MYA G + A + K++VSW +M+ GY
Sbjct: 507 ELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGY 566
Query: 191 AKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMV 250
+ F+ +A+ F +M G +++EV +
Sbjct: 567 TQYN--------FDD-----------------------KALTTFRQMLDRGIRSDEVGLT 595
Query: 251 SVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR 310
+ + ACA L AL++G+ +H +G L Q +LV +Y++CG IEE+ L F
Sbjct: 596 NAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFE--QTE 653
Query: 311 KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWH 370
D + WNA++ G G+ EE+L +F M GI + T+ +K+
Sbjct: 654 AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQ 713
Query: 371 FFESLDKCGMTPSSEHYACMVDVLARAGQLATA 403
+ K G +E ++ + A+ G ++ A
Sbjct: 714 VHAVITKTGYDSETEVCNALISMYAKCGSISDA 746
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/481 (21%), Positives = 209/481 (43%), Gaps = 51/481 (10%)
Query: 16 TLLSLLDGCK----SMLELKQLHAILITSGLSQDEPFISKVLC---FSALSNSGDIDYSY 68
T +L+ C+ + ++Q+HA ++ GL S V+C S +G +D +
Sbjct: 188 TFSGVLEACRGGSVAFDVVEQIHARILYQGLRD-----STVVCNPLIDLYSRNGFVDLAR 242
Query: 69 RAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLL 128
R F L W +I G S ++ +++ +F M G+ P + + A ++
Sbjct: 243 RVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIE 302
Query: 129 NQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLD 188
+ E G +H ++K G D ++ N+L+ +Y GN
Sbjct: 303 SLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGN------------------------ 338
Query: 189 GYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVT 248
++ A +F +MS+RD ++++LI+G + G +AM +F++M G + + T
Sbjct: 339 -------LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNT 391
Query: 249 MVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVS 308
+ S++ AC+ G L +G+ +H Y G ++ +L+++YAKC IE AL F +
Sbjct: 392 LASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF--LE 449
Query: 309 KRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEA 368
+V++WN M+ + S +F+ MQ I ++ TY G ++
Sbjct: 450 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 509
Query: 369 WHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCIN 428
+ K ++ + ++D+ A+ G+L TA+ + + + S +++G
Sbjct: 510 EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWT-TMIAGYTQ 568
Query: 429 HRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFS 488
+ + A R++++ D +GL+N + + ++E + GFS
Sbjct: 569 YNFDDKALTTFRQMLDRGIRSDE--VGLTNAVSACA---GLQALKEGQQIHAQACVSGFS 623
Query: 489 S 489
S
Sbjct: 624 S 624
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 187/416 (44%), Gaps = 46/416 (11%)
Query: 3 GVSPSFKIANLNQTLLSLLDGC----KSMLELKQLHAILITSGLSQDEPFISKVLCFSAL 58
G+ P+ +QTL LL+GC S+ E ++LH+ ++ GL + K+ F
Sbjct: 79 GIRPN------HQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLF 132
Query: 59 SNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPI-QSLSIFLKMLRHGLAPDYLTY 117
GD+ +++ F ++ IF WN +I+ + S+N I + +F++M+ + P+ T+
Sbjct: 133 K--GDLYGAFKVFDEMPERTIFTWNKMIKELA-SRNLIGEVFGLFVRMVSENVTPNEGTF 189
Query: 118 PFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQE 177
+ +A G SV +++ H A ++ +++
Sbjct: 190 SGVLEAC-------RGGSVAFDVVEQIH----------------------ARILYQGLRD 220
Query: 178 KNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKM 237
+V N ++D Y++ G + LA +VF+ + +D SW ++I G K EA+ +F M
Sbjct: 221 STVVC-NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDM 279
Query: 238 RAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAI 297
+G SVL AC + +LE G+ +H ++ G + +LV +Y G +
Sbjct: 280 YVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNL 339
Query: 298 EEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXX 357
A +F +S+R D + +N +I GL+ G E+++ LFK M G++ D T
Sbjct: 340 ISAEHIFSNMSQR--DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVV 397
Query: 358 XXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPME 413
G + K G +++ ++++ A+ + TA + + +E
Sbjct: 398 ACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE 453
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 153/504 (30%), Positives = 248/504 (49%), Gaps = 39/504 (7%)
Query: 16 TLLSLLDGCKSM---LELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
TL S+L C + E K +H + L + +S L + G +
Sbjct: 305 TLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLAL-VELYAECGKLSDCETVLR 363
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
+S I WN++I Y++ IQ+L +F +M+ + PD T A
Sbjct: 364 VVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPL 423
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G +H H+I+T D F+QNSLI M Y+K
Sbjct: 424 GKQIHGHVIRTDVS-DEFVQNSLIDM-------------------------------YSK 451
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
G + A VF + R V +W+S++ G+ + G EA+++F+ M + NEVT ++V
Sbjct: 452 SGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAV 511
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT 312
+ AC+ +G+LEKGK +H ++ +GL L T+L+DMYAKCG + A VF +S R
Sbjct: 512 IQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSI 570
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFF 372
++MI HG + ++ F M G K +EV + H G V+E ++F
Sbjct: 571 VSW--SSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYF 628
Query: 373 ESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNF 432
+ G++P+SEH+AC +D+L+R+G L AY+ I +MP AS+ G+L++GC H+
Sbjct: 629 NLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKM 688
Query: 433 ELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEI 492
++ + + L ++ D G Y LSN+YA W++ R +R AM+ +KK PG+S++EI
Sbjct: 689 DIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEI 748
Query: 493 CGVSRRFIAHDKTHSDSEETYSML 516
RF A ++ ++E Y L
Sbjct: 749 DQKVFRFGAGEENRIQTDEIYRFL 772
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 161/335 (48%), Gaps = 36/335 (10%)
Query: 32 QLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSN 91
++H +I G+ D + +LC +G++ + + F + + W+T++
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCM--YGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLE 179
Query: 92 SKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFI 151
+ +++L +F M+ G+ PD +T + + A L SVH I + + D +
Sbjct: 180 NGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETL 239
Query: 152 QNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDV 211
NSL+ MY+ CG+++ + ++F+ + +KN VSW +M+ Y + GE SE+ +
Sbjct: 240 CNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNR-GE----------FSEKAL 288
Query: 212 RSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKY 271
RS+S +I G + N VT+ SVL +C +G + +GK +H +
Sbjct: 289 RSFSEMIKS--------------------GIEPNLVTLYSVLSSCGLIGLIREGKSVHGF 328
Query: 272 IVDNGL-PLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSV 330
V L P L +LV++YA+CG + + V VS R +++ WN++I A G V
Sbjct: 329 AVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDR--NIVAWNSLISLYAHRGMV 386
Query: 331 EESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLV 365
++LGLF+ M IK D T + GLV
Sbjct: 387 IQALGLFRQMVTQRIKPDAFTLASSISACENAGLV 421
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 182/392 (46%), Gaps = 41/392 (10%)
Query: 16 TLLSLLDGCKSMLELK---QLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
T++S+++GC + L+ +H + DE + +L + S GD+ S R F
Sbjct: 204 TMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLL--TMYSKCGDLLSSERIFE 261
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLT-YPFLAKASARLLNQE 131
+++ W +I Y+ + ++L F +M++ G+ P+ +T Y L+ L +E
Sbjct: 262 KIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIRE 321
Query: 132 TGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYA 191
G SVH ++ E D ++ + ++++ YA
Sbjct: 322 -GKSVHGFAVR--RELDPNYESLSL----------------------------ALVELYA 350
Query: 192 KCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVS 251
+CG++ V +S+R++ +W+SLI Y G +A+ +F +M K + T+ S
Sbjct: 351 ECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLAS 410
Query: 252 VLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRK 311
+ AC + G + GK +H +++ + V Q SL+DMY+K G+++ A VF+ + R
Sbjct: 411 SISACENAGLVPLGKQIHGHVIRTDVSDEFV-QNSLIDMYSKSGSVDSASTVFNQIKHRS 469
Query: 312 TDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHF 371
V+ WN+M+ G + +G+ E++ LF M ++ +EVT+ G +++
Sbjct: 470 --VVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWV 527
Query: 372 FESLDKCGMTPSSEHYACMVDVLARAGQLATA 403
L G+ A ++D+ A+ G L A
Sbjct: 528 HHKLIISGLKDLFTDTA-LIDMYAKCGDLNAA 558
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 170/387 (43%), Gaps = 38/387 (9%)
Query: 18 LSLLDGCKSMLELKQLHAILITSGLSQDEPF-ISKVLCFSALSNSGDIDYSYRAFSQLSS 76
+ L C S+ + QLHA L+ +G + +P ++K++ + + G D S F
Sbjct: 5 MPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLI--ESYAFMGSPDSSRLVFEAFPY 62
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQ-ETGVS 135
P F++ +I+ ++ ++ +++ +P + +A A G
Sbjct: 63 PDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGK 122
Query: 136 VHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGE 195
VH IIK G + D I+ SL+ MY GN
Sbjct: 123 VHGRIIKGGVDDDAVIETSLLCMYGQTGN------------------------------- 151
Query: 196 MVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCA 255
+ A KVF+ M RD+ +WS+L+ ++ GE +A+ +F+ M G + + VTM+SV+
Sbjct: 152 LSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEG 211
Query: 256 CAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVL 315
CA LG L + +H I L L SL+ MY+KCG + + +F ++K+ + +
Sbjct: 212 CAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKK--NAV 269
Query: 316 IWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESL 375
W AMI E++L F +M GI+ + VT GL++E
Sbjct: 270 SWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFA 329
Query: 376 DKCGMTPSSEHYA-CMVDVLARAGQLA 401
+ + P+ E + +V++ A G+L+
Sbjct: 330 VRRELDPNYESLSLALVELYAECGKLS 356
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 235 bits (599), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 157/494 (31%), Positives = 257/494 (52%), Gaps = 46/494 (9%)
Query: 62 GDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRH--GLAPDYLTYPF 119
GD+ +YR F ++ I W +I G++ ++ ++L +FL+M + ++P+ T
Sbjct: 245 GDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLIS 304
Query: 120 LAKASARLLNQ--ETGVSVHAHIIKTGHE---YDRFIQNSLIHMYASCGNIVWAHKVFD- 173
LA A L + G +HA +I G E +D + SL+HMYAS G I A + +
Sbjct: 305 LAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE 364
Query: 174 --SVQEKNL---------------------------VSWNSMLDGYAKCGEMVLAHKVFE 204
+Q N+ VSW SM+DGY + G++ A +F+
Sbjct: 365 SFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQ 424
Query: 205 SMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEK 264
+ ++D +W+ +I G V+ + EA ++ M G K T +L + L++
Sbjct: 425 KLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQ 484
Query: 265 GKMMHKYIVDNG--LPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIG 322
GK +H I L+LQ SLV MYAKCGAIE+A +F + ++ D + WN+MI
Sbjct: 485 GKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK--DTVSWNSMIM 542
Query: 323 GLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKC-GMT 381
GL+ HG +++L LFK+M G K + VT+ H GL+ F+++ + +
Sbjct: 543 GLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQ 602
Query: 382 PSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGC-INHRNFE---LAEI 437
P +HY M+D+L RAG+L A +FI +P P ++ GALL C +N R+ + +AE
Sbjct: 603 PGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAER 662
Query: 438 VGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSR 497
+L+EL+P + ++ L NVYAG+ R D + MR+ M +GVKK+PG S V + G +
Sbjct: 663 AAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRAN 722
Query: 498 RFIAHDKTHSDSEE 511
F++ DK+ S++ +
Sbjct: 723 VFLSGDKSASEAAQ 736
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 127/294 (43%), Gaps = 45/294 (15%)
Query: 153 NSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVR 212
N++I Y + A +F + EKN+V+W SM+ GY + G++ A+++F M ER++
Sbjct: 204 NAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIV 263
Query: 213 SWSSLIDGYVKAGEYREAMAVFEKMR----AVGPKANEVTMVSVLCACAHLGALEK--GK 266
SW+++I G+ YREA+ +F +M+ AV P N T++S+ AC LG + G+
Sbjct: 264 SWTAMISGFAWNELYREALMLFLEMKKDVDAVSP--NGETLISLAYACGGLGVEFRRLGE 321
Query: 267 MMHKYIVDNGLPLTL---VLQTSLVDMYA-----------------------------KC 294
+H ++ NG L SLV MYA K
Sbjct: 322 QLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKN 381
Query: 295 GAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXX 354
G +E A +F V K D + W +MI G G V + GLF+ + D VT+
Sbjct: 382 GDLERAETLFERV-KSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLH----DKDGVTWTV 436
Query: 355 XXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFIC 408
L EA + +CG+ P + Y+ ++ L C
Sbjct: 437 MISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHC 490
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 114/247 (46%), Gaps = 42/247 (17%)
Query: 61 SGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFL 120
+GD+ ++ F +L W +I G ++ ++ S+ M+R GL P TY L
Sbjct: 413 AGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVL 472
Query: 121 AKASARLLNQETGVSVHAHIIKTGHEYDR--FIQNSLIHMYASCGNIVWAHKVFDSVQEK 178
++ N + G +H I KT YD +QNSL+ MYA CG I A+++F + +K
Sbjct: 473 LSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK 532
Query: 179 NLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMR 238
+ VSWNSM+ G + G LA K A+ +F++M
Sbjct: 533 DTVSWNSMIMGLSHHG---LADK----------------------------ALNLFKEML 561
Query: 239 AVGPKANEVTMVSVLCACAHLGALEKG-----KMMHKYIVDNGLPLTLVLQTSLVDMYAK 293
G K N VT + VL AC+H G + +G M Y + G+ + S++D+ +
Sbjct: 562 DSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYI----SMIDLLGR 617
Query: 294 CGAIEEA 300
G ++EA
Sbjct: 618 AGKLKEA 624
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 106/225 (47%), Gaps = 19/225 (8%)
Query: 152 QNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAKCGEMVLAHKVFESMS 207
+ +LI S G +V A + D + ++ +V W S+L YAK G + A +FE M
Sbjct: 45 EEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMP 104
Query: 208 ERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKM 267
ER++ + ++++ GYVK EA +F +M PK N V+ +L A G E
Sbjct: 105 ERNIVTCNAMLTGYVKCRRMNEAWTLFREM----PK-NVVSWTVMLTALCDDGRSEDAVE 159
Query: 268 MHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATH 327
+ + + +V +LV + G +E+A VF + R DV+ WNAMI G +
Sbjct: 160 LFDEMPER----NVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR--DVVSWNAMIKGYIEN 213
Query: 328 GSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFF 372
+EE+ LF DM + VT+ G V+EA+ F
Sbjct: 214 DGMEEAKLLFGDMSEKNV----VTWTSMVYGYCRYGDVREAYRLF 254
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 235 bits (599), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 134/398 (33%), Positives = 212/398 (53%), Gaps = 7/398 (1%)
Query: 20 LLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRI 79
L C + +LKQ+H +I L+ D+ + +++ S S+ G+ Y+ F+QL SP
Sbjct: 26 FLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVS--SSFGETQYASLVFNQLQSPST 83
Query: 80 FIWNTIIRGYSNSKNPIQSLSIF-LKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHA 138
F WN +IR S + P ++L +F L M+ H D T+PF+ KA + G VH
Sbjct: 84 FTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHG 143
Query: 139 HIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVL 198
IK G D F QN+L+ +Y CG KVFD + +++VSW +ML G ++
Sbjct: 144 LAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDS 203
Query: 199 AHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAH 258
A VF M R+V SW+++I YVK EA +F +M+ K NE T+V++L A
Sbjct: 204 AEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQ 263
Query: 259 LGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWN 318
LG+L G+ +H Y NG L L T+L+DMY+KCG++++A VF + + + WN
Sbjct: 264 LGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKS--LATWN 321
Query: 319 AMIGGLATHGSVEESLGLF-KDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDK 377
+MI L HG EE+L LF + + ++ D +T+ + G VK+ +F + +
Sbjct: 322 SMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ 381
Query: 378 C-GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEP 414
G++P EH ACM+ +L +A ++ A + M +P
Sbjct: 382 VYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDP 419
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 234 bits (598), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 135/425 (31%), Positives = 222/425 (52%), Gaps = 34/425 (8%)
Query: 67 SYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHG-LAPDYLTYPFLAKASA 125
S F + IF WN II +S S +S+ +FL+M R + PD T P + +A +
Sbjct: 86 SLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACS 145
Query: 126 RLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNS 185
++G +H +K G F+ ++L+ MY G
Sbjct: 146 ASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMG---------------------- 183
Query: 186 MLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKAN 245
+++ A K+F+ M RD ++++ GYV+ GE +A+F +M G +
Sbjct: 184 ---------KLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALD 234
Query: 246 EVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFH 305
V MVS+L AC LGAL+ GK +H + + L L L ++ DMY KC ++ A VF
Sbjct: 235 SVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFV 294
Query: 306 GVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLV 365
+S+R DV+ W+++I G G V S LF +M GI+ + VT+ HGGLV
Sbjct: 295 NMSRR--DVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLV 352
Query: 366 KEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSG 425
+++W +F + + + P +HYA + D ++RAG L A +F+ MP++P +++GA+LSG
Sbjct: 353 EKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSG 412
Query: 426 CINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSP 485
C + N E+ E V R+LI+L+P Y+ L+ +Y+ R+D+A +R+ M+ + + K P
Sbjct: 413 CKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVP 472
Query: 486 GFSSV 490
G SS+
Sbjct: 473 GCSSI 477
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/401 (33%), Positives = 220/401 (54%), Gaps = 11/401 (2%)
Query: 129 NQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKV---FDSVQEKNLVSWNS 185
N + + HA I K G+ + S + Y C A ++ F S+ + + N
Sbjct: 45 NSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLS-PGVCNINL 103
Query: 186 MLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGP-KA 244
+++ K GE LA KV + S+++V +W+ +I GYV+ +Y EA+ + M + K
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 245 NEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVF 304
N+ + S L ACA LG L K +H ++D+G+ L +L ++LVD+YAKCG I + VF
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 305 HGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGL 364
+ V ++ DV IWNAMI G ATHG E++ +F +M+A + D +T+ H GL
Sbjct: 224 YSV--KRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281
Query: 365 VKEAWHFFESLDK-CGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALL 423
++E +F + + + P EHY MVD+L RAG++ AY+ I MP+EP + +LL
Sbjct: 282 LEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Query: 424 SGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKK 483
S ++N EL EI + L G Y+ LSN+Y+ K+W+ A+ +RE M + G++K
Sbjct: 342 SSSRTYKNPELGEIA---IQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRK 398
Query: 484 SPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
+ G S +E G+ RF A D +H +++ Y +L + + K
Sbjct: 399 AKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTK 439
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 123/285 (43%), Gaps = 42/285 (14%)
Query: 53 LCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRH-GLA 111
L +L G+ + + S + WN +I GY + ++L ML +
Sbjct: 103 LIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIK 162
Query: 112 PDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKV 171
P+ ++ A ARL + VH+ +I +G E + + ++L+
Sbjct: 163 PNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALV--------------- 207
Query: 172 FDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAM 231
D YAKCG++ + +VF S+ DV W+++I G+ G EA+
Sbjct: 208 ----------------DVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAI 251
Query: 232 AVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGK-----MMHKYIVDNGLPLTLVLQTS 286
VF +M A + +T + +L C+H G LE+GK M ++ + L +
Sbjct: 252 RVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLE----HYGA 307
Query: 287 LVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVE 331
+VD+ + G ++EA + + + DV+IW +++ T+ + E
Sbjct: 308 MVDLLGRAGRVKEAYELIESMPI-EPDVVIWRSLLSSSRTYKNPE 351
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/478 (29%), Positives = 238/478 (49%), Gaps = 66/478 (13%)
Query: 14 NQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQ 73
N+ L +LL C S+ ++++H GDI + R Q
Sbjct: 47 NKLLATLLSNCTSLARVRRIH---------------------------GDI-FRSRILDQ 78
Query: 74 LSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETG 133
P F+WN I+R Y ++P+ ++ ++L M+R + PD + P + KA+ ++ + G
Sbjct: 79 Y--PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLG 136
Query: 134 VSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKC 193
+H+ ++ G D F ++ I +Y K
Sbjct: 137 KELHSVAVRLGFVGDEFCESGFITLYC-------------------------------KA 165
Query: 194 GEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVL 253
GE A KVF+ ER + SW+++I G AG EA+ +F M+ G + ++ TMVSV
Sbjct: 166 GEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVT 225
Query: 254 CACAHLGALEKGKMMHKYIVDNGL--PLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRK 311
+C LG L +HK ++ +++ SL+DMY KCG ++ A +F + +R
Sbjct: 226 ASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQR- 284
Query: 312 TDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHF 371
+V+ W++MI G A +G+ E+L F+ M+ G++ +++T+ HGGLV+E +
Sbjct: 285 -NVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTY 343
Query: 372 FESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHR 430
F + + + P HY C+VD+L+R GQL A + + +MPM+P + G L+ GC
Sbjct: 344 FAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFG 403
Query: 431 NFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFS 488
+ E+AE V ++ELEP +DG Y+ L+NVYA W D +R+ M+ + V K P +S
Sbjct: 404 DVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYS 461
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/479 (29%), Positives = 248/479 (51%), Gaps = 10/479 (2%)
Query: 18 LSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSP 77
L++ S+ L Q+HA LITSG D + ++L + S GD Y+ + +
Sbjct: 26 FKLVEDSNSITHLFQVHARLITSGNFWDSSWAIRLL--KSSSRFGDSSYTVSIYRSIG-- 81
Query: 78 RIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVH 137
+++ N + + Y S +P Q+L + +LR G PD T+ L + ++G H
Sbjct: 82 KLYCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCH 141
Query: 138 AHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMV 197
IK G + +QNSL+HMY CG + A K+F + ++++VSWNS++ G + G+++
Sbjct: 142 GQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVL 201
Query: 198 LAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACA 257
AHK+F+ M ++++ SW+ +I Y+ A ++++F +M G + NE T+V +L AC
Sbjct: 202 AAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACG 261
Query: 258 HLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIW 317
L++G+ +H ++ L ++V+ T+L+DMY KC + A +F +S R + + W
Sbjct: 262 RSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIR--NKVTW 319
Query: 318 NAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESL-D 376
N MI HG E L LF+ M ++ DEVT+ GLV + ++ + D
Sbjct: 320 NVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVD 379
Query: 377 KCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPME---PTASMLGALLSGCINHRNFE 433
+ + P+ H CM ++ + AG A + + +P E P ++ LLS N
Sbjct: 380 EFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPT 439
Query: 434 LAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEI 492
L E + + LIE +P + Y L N+Y+ RW+D +RE ++ R + + PG V++
Sbjct: 440 LGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDL 498
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 148/474 (31%), Positives = 233/474 (49%), Gaps = 8/474 (1%)
Query: 57 ALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLT 116
A N+ + + F ++ F WN +I G+++ LS+F +ML PD T
Sbjct: 147 AYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYT 206
Query: 117 YPFLAKA-SARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSV 175
+ L A SA N G VHA ++K G +NS++ Y G+ A + +S+
Sbjct: 207 FSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESI 266
Query: 176 QEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFE 235
+ VSWNS++D K GE A +VF E+++ +W+++I GY + G+ +A+ F
Sbjct: 267 EVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFV 326
Query: 236 KMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCG 295
+M G ++ +VL AC+ L L GKM+H ++ G + +LV++YAKCG
Sbjct: 327 EMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCG 386
Query: 296 AIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXX 355
I+EA F ++ + D++ WN M+ HG +++L L+ +M A GIK D VT+
Sbjct: 387 DIKEADRAFGDIANK--DLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGL 444
Query: 356 XXXXXHGGLVKEAWHFFESLDKCGMTP-SSEHYACMVDVLARAGQLATAYQFICQMPMEP 414
H GLV+E FES+ K P +H CM+D+ R G LA A
Sbjct: 445 LTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLV 504
Query: 415 TASMLGA----LLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDAR 470
T S + LL C H + EL V + L EP + ++ LSN+Y RW +
Sbjct: 505 TDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGE 564
Query: 471 GMREAMERRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
+R M RG+KK+PG S +E+ F+ D +H EE LN + ++M+
Sbjct: 565 DVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQHEMR 618
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 164/382 (42%), Gaps = 36/382 (9%)
Query: 56 SALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYL 115
++L+ SG I + + F + WNT++ YS +++++F ++ PD
Sbjct: 12 ASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDY 71
Query: 116 TYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSV 175
++ + A L N + G + + +I++G + NSLI MY C + + A+KVF +
Sbjct: 72 SFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDM 131
Query: 176 --QEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAV 233
+N V+W S+L Y + A VF M +R +W+ +I G+ G+ +++
Sbjct: 132 CCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSL 191
Query: 234 FEKMRAVGPKANEVTMVSVLCAC-AHLGALEKGKMMHKYIVDNGLP-------------- 278
F++M K + T S++ AC A + G+M+H ++ NG
Sbjct: 192 FKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYT 251
Query: 279 -----------------LTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMI 321
LT V S++D K G E+AL VFH ++ +++ W MI
Sbjct: 252 KLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEK--NIVTWTTMI 309
Query: 322 GGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMT 381
G +G E++L F +M G+ +D Y L+ L CG
Sbjct: 310 TGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQ 369
Query: 382 PSSEHYACMVDVLARAGQLATA 403
+ +V++ A+ G + A
Sbjct: 370 GYAYVGNALVNLYAKCGDIKEA 391
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 35/206 (16%)
Query: 180 LVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRA 239
LV S + AK G + A +VF+ M E D +W++++ Y + G ++EA+A+F ++R
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 240 VGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCG---- 295
K ++ + ++L CA LG ++ G+ + ++ +G +L + SL+DMY KC
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLS 123
Query: 296 -----------------------------AIEEALLVFHGVSKRKTDVLIWNAMIGGLAT 326
E AL VF + KR WN MI G A
Sbjct: 124 ANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRV--AFAWNIMISGHAH 181
Query: 327 HGSVEESLGLFKDMQAVGIKADEVTY 352
G +E L LFK+M K D T+
Sbjct: 182 CGKLESCLSLFKEMLESEFKPDCYTF 207
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/347 (38%), Positives = 199/347 (57%), Gaps = 14/347 (4%)
Query: 153 NSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVR 212
N+L+ G++V A K+FD + +++++S+ SM+DGYAK G+MV A +FE DVR
Sbjct: 211 NALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVR 270
Query: 213 SWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYI 272
+WS+LI GY + G+ EA VF +M A K +E MV ++ AC+ +G E + + Y+
Sbjct: 271 AWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYL 330
Query: 273 VD--NGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSV 330
N V+ +L+DM AKCG ++ A +F + +R D++ + +M+ G+A HG
Sbjct: 331 HQRMNKFSSHYVV-PALIDMNAKCGHMDRAAKLFEEMPQR--DLVSYCSMMEGMAIHGCG 387
Query: 331 EESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESL-DKCGMTPSSEHYAC 389
E++ LF+ M GI DEV + LV+E +FE + K + S +HY+C
Sbjct: 388 SEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSC 447
Query: 390 MVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDH 449
+V++L+R G+L AY+ I MP E AS G+LL GC H N E+AE+V R L ELEP
Sbjct: 448 IVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQS 507
Query: 450 DGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVS 496
G Y+ LSN+YA + RW D +R+ M G+ K ICG S
Sbjct: 508 AGSYVLLSNIYAALDRWTDVAHLRDKMNENGITK--------ICGRS 546
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 124/418 (29%), Positives = 199/418 (47%), Gaps = 50/418 (11%)
Query: 16 TLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLS 75
+L +L CKS + L Q+HA +I GL QD+ + + S+ S+S + YS F ++
Sbjct: 12 SLETLFKLCKSEIHLNQIHARIIRKGLEQDQN-LISIFISSSSSSSSSLSYSSSVFERVP 70
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLA-PDYLTYPFLAKASARLLNQETGV 134
SP ++WN +I+GYSN +++SI ++M+R GLA PD T+P + K + G
Sbjct: 71 SPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGS 130
Query: 135 SVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCG 194
SVH +++ G + D + S + Y C ++ A KVF + E+N VSW +++ Y K G
Sbjct: 131 SVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSG 190
Query: 195 EMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLC 254
E+ A +F+ M ER++ SW++L+DG VK+G+ A +F++M PK +
Sbjct: 191 ELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEM----PKRD--------- 237
Query: 255 ACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDV 314
++ TS++D YAK G + A +F R DV
Sbjct: 238 --------------------------IISYTSMIDGYAKGGDMVSARDLFE--EARGVDV 269
Query: 315 LIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFES 374
W+A+I G A +G E+ +F +M A +K DE G E +S
Sbjct: 270 RAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCF-ELCEKVDS 328
Query: 375 LDKCGMTPSSEHYA--CMVDVLARAGQLATAYQFICQMPMEPTAS----MLGALLSGC 426
M S HY ++D+ A+ G + A + +MP S M G + GC
Sbjct: 329 YLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGC 386
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 124/290 (42%), Gaps = 44/290 (15%)
Query: 49 ISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRH 108
IS + GD+ + F + + W+ +I GY+ + P ++ +F +M
Sbjct: 239 ISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAK 298
Query: 109 GLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYD-RFIQNSLIHMYASCGNIVW 167
+ PD L A +++ E V +++ + +++ ++ +LI M A CG++
Sbjct: 299 NVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDR 358
Query: 168 AHKVFDSVQEKNLVSWNSMLDGYA--KCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAG 225
A K+F+ + +++LVS+ SM++G A CG
Sbjct: 359 AAKLFEEMPQRDLVSYCSMMEGMAIHGCGS------------------------------ 388
Query: 226 EYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKG----KMMHKYIVDNGLPLTL 281
EA+ +FEKM G +EV +L C +E+G ++M K P
Sbjct: 389 ---EAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHY 445
Query: 282 VLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVE 331
+ +V++ ++ G ++EA + + + W +++GG + HG+ E
Sbjct: 446 ---SCIVNLLSRTGKLKEAYELIKSMP-FEAHASAWGSLLGGCSLHGNTE 491
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 149/512 (29%), Positives = 255/512 (49%), Gaps = 41/512 (8%)
Query: 19 SLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLS 75
S+L C S+ L Q+HA I + L D + ++ A + + + + F +
Sbjct: 355 SILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDC--LTDARKVFDIFA 412
Query: 76 SPRIFIWNTIIRGYSNSKNPIQ---SLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
+ + ++N +I GYS + +L+IF M + P LT+ L +ASA L +
Sbjct: 413 AADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGL 472
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
+H + K G D F ++LI +Y++C + + DS
Sbjct: 473 SKQIHGLMFKYGLNLDIFAGSALIDVYSNC------YCLKDS------------------ 508
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
VF+ M +D+ W+S+ GYV+ E EA+ +F +++ + +E T ++
Sbjct: 509 -------RLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANM 561
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT 312
+ A +L +++ G+ H ++ GL + +L+DMYAKCG+ E+A F + R
Sbjct: 562 VTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASR-- 619
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFF 372
DV+ WN++I A HG +++L + + M + GI+ + +T+ H GLV++ F
Sbjct: 620 DVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQF 679
Query: 373 ESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNF 432
E + + G+ P +EHY CMV +L RAG+L A + I +MP +P A + +LLSGC N
Sbjct: 680 ELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNV 739
Query: 433 ELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEI 492
ELAE I +P G + LSN+YA W +A+ +RE M+ GV K PG S + I
Sbjct: 740 ELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGI 799
Query: 493 CGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
F++ DK+H + + Y +L+ + Q++
Sbjct: 800 NKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 152/324 (46%), Gaps = 38/324 (11%)
Query: 32 QLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSN 91
QL + L+ SG +D ++ +L L + G+IDY+ F L W T+I G
Sbjct: 169 QLQSFLVKSGFDRD-VYVGTLLIDFYLKD-GNIDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 92 SKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFI 151
SL +F +++ + PD + A + L E G +HAHI++ G E D +
Sbjct: 227 MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASL 286
Query: 152 QNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDV 211
N LI D Y KCG ++ AHK+F M +++
Sbjct: 287 MNVLI-------------------------------DSYVKCGRVIAAHKLFNGMPNKNI 315
Query: 212 RSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKY 271
SW++L+ GY + ++EAM +F M G K + S+L +CA L AL G +H Y
Sbjct: 316 ISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAY 375
Query: 272 IVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGG---LATHG 328
+ L + SL+DMYAKC + +A VF + DV+++NAMI G L T
Sbjct: 376 TIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFA--AADVVLFNAMIEGYSRLGTQW 433
Query: 329 SVEESLGLFKDMQAVGIKADEVTY 352
+ E+L +F+DM+ I+ +T+
Sbjct: 434 ELHEALNIFRDMRFRLIRPSLLTF 457
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 146/319 (45%), Gaps = 37/319 (11%)
Query: 16 TLLSLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
T +SLL S+ L KQ+H ++ GL+ D F L SN + S F
Sbjct: 456 TFVSLLRASASLTSLGLSKQIHGLMFKYGLNLD-IFAGSAL-IDVYSNCYCLKDSRLVFD 513
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
++ + IWN++ GY ++L++FL++ PD T+ + A+ L + +
Sbjct: 514 EMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQL 573
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G H ++K G E + +I N+L+ MYA CG+ AHK FDS +++V WNS++ YA
Sbjct: 574 GQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYA- 632
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
GE ++A+ + EKM + G + N +T V V
Sbjct: 633 ------------------------------NHGEGKKALQMLEKMMSEGIEPNYITFVGV 662
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT 312
L AC+H G +E G + ++ G+ +V + + G + +A + + K
Sbjct: 663 LSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPT-KP 721
Query: 313 DVLIWNAMIGGLATHGSVE 331
++W +++ G A G+VE
Sbjct: 722 AAIVWRSLLSGCAKAGNVE 740
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 151/319 (47%), Gaps = 38/319 (11%)
Query: 33 LHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNS 92
+H +I GL D ++S +L + S +G + Y+ + F ++ + W+T++ ++
Sbjct: 66 VHGQIIVWGLELD-TYLSNIL-INLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHH 123
Query: 93 KNPIQSLSIFLKM--LRHGLAPDYLTYPFLAKASARLLNQETGV-SVHAHIIKTGHEYDR 149
+SL +FL+ R +Y+ F+ S V + + ++K+G + D
Sbjct: 124 GIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDV 183
Query: 150 FIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSER 209
++ LI Y GNI +A VFD++ EK+ V+W +M+ G K G ++ ++F + E
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMED 243
Query: 210 DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMH 269
+V + DGY+ + +VL AC+ L LE GK +H
Sbjct: 244 NV-----VPDGYI--------------------------LSTVLSACSILPFLEGGKQIH 272
Query: 270 KYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGS 329
+I+ GL + L L+D Y KCG + A +F+G+ + +++ W ++ G +
Sbjct: 273 AHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNK--NIISWTTLLSGYKQNAL 330
Query: 330 VEESLGLFKDMQAVGIKAD 348
+E++ LF M G+K D
Sbjct: 331 HKEAMELFTSMSKFGLKPD 349
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 231 bits (590), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 147/481 (30%), Positives = 241/481 (50%), Gaps = 32/481 (6%)
Query: 16 TLLSLLDGCKSMLELK---QLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
T +L C + +++ +H ++ +G + ++S L + G+++Y R F
Sbjct: 109 TFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNM-YVSTCLLHMYMC-CGEVNYGLRVFE 166
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
+ + W ++I G+ N+ ++ F +M +G+ + L A R + T
Sbjct: 167 DIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVT 226
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G H + G +D + Q+ + N++ S++D YAK
Sbjct: 227 GKWFHGFL--QGLGFDPYFQSKVGF---------------------NVILATSLIDMYAK 263
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
CG++ A +F+ M ER + SW+S+I GY + G+ EA+ +F M +G ++VT +SV
Sbjct: 264 CGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSV 323
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT 312
+ A G + G+ +H Y+ G + +LV+MYAK G E A F + K+
Sbjct: 324 IRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKK-- 381
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDMQAVG-IKADEVTYXXXXXXXXHGGLVKEAWHF 371
D + W +I GLA+HG E+L +F+ MQ G D +TY H GLV+E +
Sbjct: 382 DTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRY 441
Query: 372 F-ESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHR 430
F E D G+ P+ EHY CMVD+L+RAG+ A + + MP++P ++ GALL+GC H
Sbjct: 442 FAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHE 501
Query: 431 NFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSV 490
N EL + + + E E G Y+ LSN+YA RW D + +RE+M+ + V K G SSV
Sbjct: 502 NLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSV 561
Query: 491 E 491
E
Sbjct: 562 E 562
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 207/398 (52%), Gaps = 42/398 (10%)
Query: 15 QTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCF-SALSNSGDIDYSYRAFSQ 73
+ +LS L+ C+S++EL QLH ++I S + ++ +S+++ F + + ++ Y+ F
Sbjct: 7 KPILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFES 66
Query: 74 LSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETG 133
+ P ++IWN++IRGYSNS NP ++L + +MLR G +PDY T+P++ KA + L + + G
Sbjct: 67 IDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFG 126
Query: 134 VSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKC 193
VH ++KTG E + ++ L+HMY CG + + +VF+ + + N+V+W S
Sbjct: 127 SCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGS-------- 178
Query: 194 GEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVL 253
LI G+V + +A+ F +M++ G KANE MV +L
Sbjct: 179 -----------------------LISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLL 215
Query: 254 CACAHLGALEKGKMMHKYIVDNGLP--------LTLVLQTSLVDMYAKCGAIEEALLVFH 305
AC + GK H ++ G ++L TSL+DMYAKCG + A +F
Sbjct: 216 VACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFD 275
Query: 306 GVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLV 365
G+ +R ++ WN++I G + +G EE+L +F DM +GI D+VT+ G
Sbjct: 276 GMPERT--LVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCS 333
Query: 366 KEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATA 403
+ + K G + +V++ A+ G +A
Sbjct: 334 QLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESA 371
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 116/259 (44%), Gaps = 14/259 (5%)
Query: 178 KNLVSWNSMLDGYAKCGE---MVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVF 234
+N++ + ++D C E + A VFES+ V W+S+I GY + +A+ +
Sbjct: 36 RNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFY 95
Query: 235 EKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKC 294
++M G + T VL AC+ L ++ G +H ++V G + + + T L+ MY C
Sbjct: 96 QEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCC 155
Query: 295 GAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXX 354
G + L VF + + +V+ W ++I G + +++ F++MQ+ G+KA+E
Sbjct: 156 GEVNYGLRVFEDIP--QWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVD 213
Query: 355 XXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHY--------ACMVDVLARAGQLATAYQF 406
+ F L G P + ++D+ A+ G L TA
Sbjct: 214 LLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYL 273
Query: 407 ICQMPMEPTASMLGALLSG 425
MP E T ++++G
Sbjct: 274 FDGMP-ERTLVSWNSIITG 291
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 114/244 (46%), Gaps = 13/244 (5%)
Query: 3 GVSPSFKIANLNQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSG 62
G++P K+ L+ S++ GC + + +HA + +G +D + ++ + + +G
Sbjct: 312 GIAPD-KVTFLSVIRASMIQGCSQLGQ--SIHAYVSKTGFVKDAAIVCALV--NMYAKTG 366
Query: 63 DIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLA-PDYLTYPFLA 121
D + + +AF L W +I G ++ + ++LSIF +M G A PD +TY +
Sbjct: 367 DAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVL 426
Query: 122 KASARLLNQETGVSVHAHIIKTGHEYDRFIQN--SLIHMYASCGNIVWAHKVFDSVQEK- 178
A + + E G A ++ H + +++ ++ + + G A ++ ++ K
Sbjct: 427 YACSHIGLVEEGQRYFAE-MRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKP 485
Query: 179 NLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRS---WSSLIDGYVKAGEYREAMAVFE 235
N+ W ++L+G + L ++ ++E + + L + Y KAG + + + E
Sbjct: 486 NVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRE 545
Query: 236 KMRA 239
M++
Sbjct: 546 SMKS 549
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 231 bits (590), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 144/497 (28%), Positives = 232/497 (46%), Gaps = 39/497 (7%)
Query: 25 KSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLS--SPRIFIW 82
KS+ L+ +HA+ I G+ D S GD+D + F + + W
Sbjct: 167 KSLKLLEAMHAVGIRLGV--DVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSW 224
Query: 83 NTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIK 142
N++ + YS + ++ MLR PD T+ LA + G +H+H I
Sbjct: 225 NSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIH 284
Query: 143 TGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKV 202
G + D N+ I MY+ + A +FD + + VSW M+ GYA+ G+M
Sbjct: 285 LGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDM------ 338
Query: 203 FESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGAL 262
EA+A+F M G K + VT++S++ C G+L
Sbjct: 339 -------------------------DEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSL 373
Query: 263 EKGKMMHKYIVDNGLPL-TLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMI 321
E GK + G +++ +L+DMY+KCG+I EA +F ++ V+ W MI
Sbjct: 374 ETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKT--VVTWTTMI 431
Query: 322 GGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKC-GM 380
G A +G E+L LF M + K + +T+ H G +++ W +F + + +
Sbjct: 432 AGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNI 491
Query: 381 TPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGR 440
+P +HY+CMVD+L R G+L A + I M +P A + GALL+ C HRN ++AE
Sbjct: 492 SPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAE 551
Query: 441 KLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFI 500
L LEP Y+ ++N+YA WD +R M++R +KK PG S +++ G + F
Sbjct: 552 SLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFT 611
Query: 501 AHDKTHSDSEETYSMLN 517
+ H ++E Y LN
Sbjct: 612 VGEHGHVENEVIYFTLN 628
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 128/271 (47%), Gaps = 31/271 (11%)
Query: 82 WNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHII 141
WN IR N +P++SL +F +M R G P+ T+PF+AKA ARL + VHAH+I
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 142 KTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHK 201
K+ D F+ + + M+ C ++ +A KVF+ + E++ +WN+ML G+ + G A
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 202 VFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGA 261
+F M ++ S + +++ + +++ + E M AVG +
Sbjct: 140 LFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRL----------------- 182
Query: 262 LEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMI 321
G+ + + + + + Y KCG ++ A LVF + + V+ WN+M
Sbjct: 183 --------------GVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMF 228
Query: 322 GGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
+ G ++ GL+ M K D T+
Sbjct: 229 KAYSVFGEAFDAFGLYCLMLREEFKPDLSTF 259
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 73/141 (51%), Gaps = 2/141 (1%)
Query: 211 VRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHK 270
V +W+ I V + E++ +F +M+ G + N T V ACA L + +M+H
Sbjct: 17 VNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHA 76
Query: 271 YIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSV 330
+++ + + + T+ VDM+ KC +++ A VF + +R D WNAM+ G G
Sbjct: 77 HLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPER--DATTWNAMLSGFCQSGHT 134
Query: 331 EESLGLFKDMQAVGIKADEVT 351
+++ LF++M+ I D VT
Sbjct: 135 DKAFSLFREMRLNEITPDSVT 155
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 148/473 (31%), Positives = 225/473 (47%), Gaps = 44/473 (9%)
Query: 26 SMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTI 85
++ E K +H G S D + K + S I Y+ R F W+ +
Sbjct: 220 ALREGKAVHGYCTRMGFSND--LVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAM 277
Query: 86 IRGYSNSKNPIQSLSIFLKMLRHG----LAPDYLTYPFLAKASARLLNQETGVSVHAHII 141
I GY ++ ++ +F +ML + + P + + AR + G VH + +
Sbjct: 278 IGGYVENEMIKEAGEVFFQMLVNDNVAMVTP--VAIGLILMGCARFGDLSGGRCVHCYAV 335
Query: 142 KTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHK 201
K G D +QN++I YA K G + A +
Sbjct: 336 KAGFILDLTVQNTIISFYA-------------------------------KYGSLCDAFR 364
Query: 202 VFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGA 261
F + +DV S++SLI G V E+ +F +MR G + + T++ VL AC+HL A
Sbjct: 365 QFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAA 424
Query: 262 LEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMI 321
L G H Y V +G + + +L+DMY KCG ++ A VF + KR D++ WN M+
Sbjct: 425 LGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKR--DIVSWNTML 482
Query: 322 GGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDK--CG 379
G HG +E+L LF MQ G+ DEVT H GLV E F S+ +
Sbjct: 483 FGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFN 542
Query: 380 MTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVG 439
+ P +HY CM D+LARAG L AY F+ +MP EP +LG LLS C ++N EL V
Sbjct: 543 VIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVS 602
Query: 440 RKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEI 492
+K+ L + + LSN Y+ +RW+DA +R ++RG+ K+PG+S V++
Sbjct: 603 KKMQSLGETTESLVL-LSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 161/330 (48%), Gaps = 40/330 (12%)
Query: 17 LLSLLDGC---KSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQ 73
LSLL+ C ++++ + +H L+ L+ + L ++ +++ + F +
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLT-RLYASCNEVELARHVFDE 60
Query: 74 LSSPRI--FIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQE 131
+ PRI W+ +IR Y+++ ++L ++ KML G+ P TYPF+ KA A L +
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120
Query: 132 TGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYA 191
G +H+H+ + D ++ +L+ D YA
Sbjct: 121 DGKLIHSHVNCSDFATDMYVCTALV-------------------------------DFYA 149
Query: 192 KCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAV-GPKANEVTMV 250
KCGE+ +A KVF+ M +RD+ +W+++I G+ + + +F MR + G N T+V
Sbjct: 150 KCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIV 209
Query: 251 SVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR 310
+ A GAL +GK +H Y G LV++T ++D+YAK I A VF + +
Sbjct: 210 GMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFD-LDFK 268
Query: 311 KTDVLIWNAMIGGLATHGSVEESLGLFKDM 340
K +V W+AMIGG + ++E+ +F M
Sbjct: 269 KNEV-TWSAMIGGYVENEMIKEAGEVFFQM 297
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 158/334 (47%), Gaps = 42/334 (12%)
Query: 23 GCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIW 82
G +++ + K +H+ + S + D + ++ F A G+++ + + F ++ + W
Sbjct: 115 GLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYA--KCGELEMAIKVFDEMPKRDMVAW 172
Query: 83 NTIIRGYSNSKNPIQSLSIFLKMLR-HGLAPDYLT----YPFLAKASARLLNQETGVSVH 137
N +I G+S + +FL M R GL+P+ T +P L +A A G +VH
Sbjct: 173 NAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGA----LREGKAVH 228
Query: 138 AHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMV 197
+ + G D ++ ++ +YA I++A +VFD +KN V+W++M+ GY + EM+
Sbjct: 229 GYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVE-NEMI 287
Query: 198 LAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACA 257
+AGE M V + + V P V + +L CA
Sbjct: 288 ------------------------KEAGEVFFQMLVNDNVAMVTP----VAIGLILMGCA 319
Query: 258 HLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIW 317
G L G+ +H Y V G L L +Q +++ YAK G++ +A F + + DV+ +
Sbjct: 320 RFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLK--DVISY 377
Query: 318 NAMIGGLATHGSVEESLGLFKDMQAVGIKADEVT 351
N++I G + EES LF +M+ GI+ D T
Sbjct: 378 NSLITGCVVNCRPEESFRLFHEMRTSGIRPDITT 411
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 155/332 (46%), Gaps = 43/332 (12%)
Query: 20 LLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSS 76
+L GC +L + +H + +G D + ++ F A G + ++R FS++
Sbjct: 314 ILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYA--KYGSLCDAFRQFSEIGL 371
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
+ +N++I G + P +S +F +M G+ PD T + A + L G S
Sbjct: 372 KDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSC 431
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEM 196
H + + G+ + I N+L+ MY CG + A +VFD++ ++++VSWN+ML G+
Sbjct: 432 HGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFG----- 486
Query: 197 VLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCAC 256
I G K EA+++F M+ G +EVT++++L AC
Sbjct: 487 ---------------------IHGLGK-----EALSLFNSMQETGVNPDEVTLLAILSAC 520
Query: 257 AHLGALEKGKMMHKYIVDNGLPLTLVLQ--TSLVDMYAKCGAIEEALLVFHGVSKR--KT 312
+H G +++GK + + + + + D+ A+ G ++EA + V+K +
Sbjct: 521 SHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEA---YDFVNKMPFEP 577
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDMQAVG 344
D+ + ++ T+ + E + K MQ++G
Sbjct: 578 DIRVLGTLLSACWTYKNAELGNEVSKKMQSLG 609
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 87/156 (55%), Gaps = 4/156 (2%)
Query: 190 YAKCGEMVLAHKVFESMSERDVR--SWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEV 247
YA C E+ LA VF+ + + +W +I Y +A+ ++ KM G + +
Sbjct: 45 YASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKY 104
Query: 248 TMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGV 307
T VL ACA L A++ GK++H ++ + + + T+LVD YAKCG +E A+ VF +
Sbjct: 105 TYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEM 164
Query: 308 SKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAV 343
KR D++ WNAMI G + H + + +GLF DM+ +
Sbjct: 165 PKR--DMVAWNAMISGFSLHCCLTDVIGLFLDMRRI 198
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 36/256 (14%)
Query: 250 VSVLCACAHLGALEKGKMMHKYIVDNGLPLTL-VLQTSLVDMYAKCGAIEEALLVFHGVS 308
+S+L C L G+++H++++ L L+ + +L +YA C +E A VF +
Sbjct: 3 LSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIP 62
Query: 309 KRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEA 368
+ + + W+ MI A++ E++L L+ M G++ + TY V +A
Sbjct: 63 HPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYP----------FVLKA 112
Query: 369 WHFFESLDKCGMTPS--------SEHYAC--MVDVLARAGQLATAYQFICQMPMEPTASM 418
++D + S ++ Y C +VD A+ G+L A + +MP +
Sbjct: 113 CAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAW 172
Query: 419 LGALLSGCINHRNFELAEIVG-----RKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMR 473
A++SG H L +++G R++ L P+ LS + A +R
Sbjct: 173 -NAMISGFSLH--CCLTDVIGLFLDMRRIDGLSPN-------LSTIVGMFPALGRAGALR 222
Query: 474 EAMERRGVKKSPGFSS 489
E G GFS+
Sbjct: 223 EGKAVHGYCTRMGFSN 238
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 148/490 (30%), Positives = 241/490 (49%), Gaps = 43/490 (8%)
Query: 20 LLDGCKSMLEL----KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLS 75
LL C S L K IL L + +SK++ ++ +D + + F ++
Sbjct: 137 LLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRR--LDLARKIFDDVT 194
Query: 76 SPRIF---IWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
+ +W + GYS + +P +L +++ ML + P + KA L +
Sbjct: 195 DSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRV 254
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G +HA I+K + D+ + N L+ +Y G +FD
Sbjct: 255 GRGIHAQIVKRKEKVDQVVYNVLLKLYMESG-------LFDD------------------ 289
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
A KVF+ MSER+V +W+SLI K E +F KM+ + T+ ++
Sbjct: 290 ------ARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTI 343
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT 312
L AC+ + AL GK +H I+ + + L SL+DMY KCG +E + VF + +
Sbjct: 344 LPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTK-- 401
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFF 372
D+ WN M+ A +G++EE + LF+ M G+ D +T+ GL + F
Sbjct: 402 DLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLF 461
Query: 373 ESLD-KCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRN 431
E + + ++P+ EHYAC+VD+L RAG++ A + I MP +P+AS+ G+LL+ C H N
Sbjct: 462 ERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGN 521
Query: 432 FELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVE 491
+ EI ++L LEP + G Y+ +SN+YA K WD+ +RE M++RGVKK G S V+
Sbjct: 522 VSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQ 581
Query: 492 ICGVSRRFIA 501
+ + F+A
Sbjct: 582 VKDKIQIFVA 591
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 152/502 (30%), Positives = 242/502 (48%), Gaps = 18/502 (3%)
Query: 25 KSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNT 84
K + E Q++ + I S LS D + + + ++R F ++ WN
Sbjct: 396 KGLSEGLQIYGLAIKSSLSLDVCVANAAI--DMYGKCQALAEAFRVFDEMRRRDAVSWNA 453
Query: 85 IIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTG 144
II + + ++L +F+ MLR + PD T+ + KA + G+ +H+ I+K+G
Sbjct: 454 IIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGG-SLGYGMEIHSSIVKSG 512
Query: 145 HEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFE 204
+ + SLI MY+ CG I A K+ ++ VS G M K+
Sbjct: 513 MASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS-----------GTMEELEKMHN 561
Query: 205 SMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEK 264
+ SW+S+I GYV + +A +F +M +G ++ T +VL CA+L +
Sbjct: 562 KRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGL 621
Query: 265 GKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGL 324
GK +H ++ L + + ++LVDMY+KCG + ++ L+F +R D + WNAMI G
Sbjct: 622 GKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRR--DFVTWNAMICGY 679
Query: 325 ATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDK-CGMTPS 383
A HG EE++ LF+ M IK + VT+ H GL+ + +F + + G+ P
Sbjct: 680 AHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQ 739
Query: 384 SEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHR-NFELAEIVGRKL 442
HY+ MVD+L ++G++ A + I +MP E + LL C HR N E+AE L
Sbjct: 740 LPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAAL 799
Query: 443 IELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAH 502
+ L+P Y LSNVYA W+ +R M +KK PG S VE+ F+
Sbjct: 800 LRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVG 859
Query: 503 DKTHSDSEETYSMLNFVAYQMK 524
DK H EE Y L + +MK
Sbjct: 860 DKAHPRWEEIYEELGLIYSEMK 881
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 133/261 (50%), Gaps = 2/261 (0%)
Query: 92 SKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFI 151
S + S S F L + + F+ K A+ E G HAH+I +G F+
Sbjct: 26 SYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFV 85
Query: 152 QNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDV 211
N L+ +Y + + V A VFD + +++VSWN M++GY+K +M A+ F M RDV
Sbjct: 86 LNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDV 145
Query: 212 RSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKY 271
SW+S++ GY++ GE +++ VF M G + + T +L C+ L G +H
Sbjct: 146 VSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGI 205
Query: 272 IVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVE 331
+V G +V ++L+DMYAK E+L VF G+ ++ + + W+A+I G + +
Sbjct: 206 VVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNS--VSWSAIIAGCVQNNLLS 263
Query: 332 ESLGLFKDMQAVGIKADEVTY 352
+L FK+MQ V + Y
Sbjct: 264 LALKFFKEMQKVNAGVSQSIY 284
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/525 (22%), Positives = 211/525 (40%), Gaps = 125/525 (23%)
Query: 28 LEL-KQLHAILITSGL--------------SQDEPFISKVLCFSAL-------------- 58
LEL KQ HA +I SG + F+S + F +
Sbjct: 64 LELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMING 123
Query: 59 -SNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTY 117
S S D+ + F+ + + WN+++ GY + ++S+ +F+ M R G+ D T+
Sbjct: 124 YSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTF 183
Query: 118 PFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQE 177
+ K + L + G+ +H +++ G + D ++L+ MYA V + +VF + E
Sbjct: 184 AIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPE 243
Query: 178 KNLVSWNSMLDGYAKCGEMVLAHKVFESMSERD-----------VRSWSSL--------- 217
KN VSW++++ G + + LA K F+ M + + +RS ++L
Sbjct: 244 KNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQL 303
Query: 218 -------------------IDGYVKAGEYREAMAVFE----------------------- 235
+D Y K ++A +F+
Sbjct: 304 HAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHG 363
Query: 236 --------KMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSL 287
++ + G +E+++ V ACA + L +G ++ + + L L + + +
Sbjct: 364 FKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAA 423
Query: 288 VDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKA 347
+DMY KC A+ EA VF + +R D + WNA+I +G E+L LF M I+
Sbjct: 424 IDMYGKCQALAEAFRVFDEMRRR--DAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEP 481
Query: 348 DEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFI 407
DE T+ GG + S+ K GM +S ++D+ ++ G + A +
Sbjct: 482 DEFTFGSILKACT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEK-- 538
Query: 408 CQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGR 452
I+ R F+ A + G + ELE H+ R
Sbjct: 539 -------------------IHSRFFQRANVSG-TMEELEKMHNKR 563
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 147/523 (28%), Positives = 263/523 (50%), Gaps = 41/523 (7%)
Query: 7 SFKIANLNQTLL-SLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSALSNSG 62
SF + + N+ + S L C S+L Q+H + I S L+ + I+ + G
Sbjct: 262 SFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNA--IAGCSLCDMYARCG 319
Query: 63 DIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAK 122
++ + R F Q+ P WN II G +N+ +++S+F +M G PD ++ L
Sbjct: 320 FLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLC 379
Query: 123 ASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVS 182
A + + G+ +H++IIK G D + NSL+ MY
Sbjct: 380 AQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTF--------------------- 418
Query: 183 WNSMLDGYAKCGEMVLAHKVFESM-SERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVG 241
C ++ +FE + D SW++++ ++ + E + +F+ M
Sbjct: 419 ----------CSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSE 468
Query: 242 PKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEAL 301
+ + +TM ++L C + +L+ G +H Y + GL ++ L+DMYAKCG++ +A
Sbjct: 469 CEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQAR 528
Query: 302 LVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXH 361
+F + R DV+ W+ +I G A G EE+L LFK+M++ GI+ + VT+ H
Sbjct: 529 RIFDSMDNR--DVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSH 586
Query: 362 GGLVKEAWHFFESLD-KCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLG 420
GLV+E + ++ + G++P+ EH +C+VD+LARAG+L A +FI +M +EP +
Sbjct: 587 VGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWK 646
Query: 421 ALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRG 480
LLS C N LA+ +++++P + ++ L +++A W++A +R +M++
Sbjct: 647 TLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHD 706
Query: 481 VKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQM 523
VKK PG S +EI F A D H + ++ Y++L+ + QM
Sbjct: 707 VKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQM 749
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 126/522 (24%), Positives = 217/522 (41%), Gaps = 87/522 (16%)
Query: 5 SPSFKIANLNQTLLSLLDGC---KSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNS 61
+ SFKI +T +SL+ C +S+ + +++H ++ S D + +L S
Sbjct: 60 NSSFKIRL--RTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHIL--SMYGKC 115
Query: 62 GDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLA 121
G + + F + + + ++I GYS + +++ ++LKML+ L PD + +
Sbjct: 116 GSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSII 175
Query: 122 KASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLV 181
KA A + G +HA +IK QN+LI MY + A +VF + K+L+
Sbjct: 176 KACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLI 235
Query: 182 SWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVG 241
SW+S++ G+++ G FE EA++ ++M + G
Sbjct: 236 SWSSIIAGFSQLG--------FE-----------------------FEALSHLKEMLSFG 264
Query: 242 P-KANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEA 300
NE S L AC+ L + G +H + + L + SL DMYA+CG + A
Sbjct: 265 VFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSA 324
Query: 301 LLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXX 360
VF + + D WN +I GLA +G +E++ +F M++ G D ++
Sbjct: 325 RRVFDQI--ERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQT 382
Query: 361 -----------HGGLVKEAWHFFESLDKCG-----MTPSSEHYACM---------VDVLA 395
H ++K W F L C T S+ Y C D ++
Sbjct: 383 KPMALSQGMQIHSYIIK--WGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVS 440
Query: 396 RAGQLATAYQFICQMPM------------EPTASMLGALLSGCINHRNFELAEIVGRKLI 443
L Q + M EP +G LL GC+ + +L V +
Sbjct: 441 WNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSL 500
Query: 444 E--LEPDHDGRYI--GLSNVYAGVKRWDDARGMREAMERRGV 481
+ L P+ ++I GL ++YA AR + ++M+ R V
Sbjct: 501 KTGLAPE---QFIKNGLIDMYAKCGSLGQARRIFDSMDNRDV 539
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 73/136 (53%), Gaps = 3/136 (2%)
Query: 218 IDGYVKAGEYREAMAVFE-KMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNG 276
I+ K+ YREA+ F+ + K T +S++CAC+ +L +G+ +H +I+++
Sbjct: 38 INSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSN 97
Query: 277 LPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGL 336
+L ++ MY KCG++ +A VF + +R +++ + ++I G + +G E++ L
Sbjct: 98 CKYDTILNNHILSMYGKCGSLRDAREVFDFMPER--NLVSYTSVITGYSQNGQGAEAIRL 155
Query: 337 FKDMQAVGIKADEVTY 352
+ M + D+ +
Sbjct: 156 YLKMLQEDLVPDQFAF 171
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 149/491 (30%), Positives = 244/491 (49%), Gaps = 45/491 (9%)
Query: 7 SFKIANLNQTLLSLLDGCKSMLELKQ---LHAILITSGLSQDEPFISKVLCFSALSNSGD 63
SF + TL S + C + E++ H ++IT G + FIS L + N
Sbjct: 156 SFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNH-FISSTLAYLYGVNREP 214
Query: 64 IDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLR-HGLAPDYLTYPFLAK 122
+D + R F ++ P + W ++ +S + ++L +F M R GL PD T+ +
Sbjct: 215 VD-ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLT 273
Query: 123 ASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVS 182
A L + G +H +I G N+V
Sbjct: 274 ACGNLRRLKQGKEIHGKLITNG-------------------------------IGSNVVV 302
Query: 183 WNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGP 242
+S+LD Y KCG + A +VF MS+++ SWS+L+ GY + GE+ +A+ +F +M
Sbjct: 303 ESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME---- 358
Query: 243 KANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALL 302
+ + +VL ACA L A+ GK +H V G ++++++L+D+Y K G I+ A
Sbjct: 359 EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASR 418
Query: 303 VFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHG 362
V+ +S R +++ WNAM+ LA +G EE++ F DM GIK D +++ H
Sbjct: 419 VYSKMSIR--NMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHT 476
Query: 363 GLVKEAWHFFESLDKC-GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGA 421
G+V E ++F + K G+ P +EHY+CM+D+L RAG A + + AS+ G
Sbjct: 477 GMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGV 536
Query: 422 LLSGCI-NHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRG 480
LL C N +AE + ++++ELEP + Y+ LSN+Y + R DA +R+ M RRG
Sbjct: 537 LLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRG 596
Query: 481 VKKSPGFSSVE 491
V K+ G S ++
Sbjct: 597 VAKTVGQSWID 607
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 161/327 (49%), Gaps = 38/327 (11%)
Query: 19 SLLDGCK---SMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLS 75
SLL C S + Q HA ++ SGL D + +L G + + R F
Sbjct: 66 SLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPG-MRETRRVFDGRF 124
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVS 135
W +++ GY K +++L +F++M+ GL + T KA + L G
Sbjct: 125 VKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRC 184
Query: 136 VHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGE 195
H +I G E++ FI ++L ++Y V A +VFD + E +++ W ++L ++K
Sbjct: 185 FHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSK--- 241
Query: 196 MVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKM-RAVGPKANEVTMVSVLC 254
D+ Y EA+ +F M R G + T +VL
Sbjct: 242 -------------NDL---------------YEEALGLFYAMHRGKGLVPDGSTFGTVLT 273
Query: 255 ACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDV 314
AC +L L++GK +H ++ NG+ +V+++SL+DMY KCG++ EA VF+G+SK+ +
Sbjct: 274 ACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNS-- 331
Query: 315 LIWNAMIGGLATHGSVEESLGLFKDMQ 341
+ W+A++GG +G E+++ +F++M+
Sbjct: 332 VSWSALLGGYCQNGEHEKAIEIFREME 358
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 141/324 (43%), Gaps = 37/324 (11%)
Query: 117 YPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCG-NIVWAHKVFDSV 175
Y L + ++ + G+ HAH++K+G E DR + NSL+ +Y G + +VFD
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGR 123
Query: 176 QEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFE 235
K+ +SW SM+ G YV E+ +A+ VF
Sbjct: 124 FVKDAISWTSMMSG-------------------------------YVTGKEHVKALEVFV 152
Query: 236 KMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCG 295
+M + G ANE T+ S + AC+ LG + G+ H ++ +G + ++L +Y
Sbjct: 153 EMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNR 212
Query: 296 AIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDM-QAVGIKADEVTYXX 354
+A VF + + DV+ W A++ + + EE+LGLF M + G+ D T+
Sbjct: 213 EPVDARRVFDEMP--EPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGT 270
Query: 355 XXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEP 414
+ +K+ L G+ + + ++D+ + G + A Q M +
Sbjct: 271 VLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKN 330
Query: 415 TASMLGALLSG-CINHRNFELAEI 437
+ S ALL G C N + + EI
Sbjct: 331 SVSW-SALLGGYCQNGEHEKAIEI 353
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 148/516 (28%), Positives = 252/516 (48%), Gaps = 43/516 (8%)
Query: 16 TLLSLLDGCKSM--LELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQ 73
T SLL G +M ++K++H + G D S ++ ++ S ++ + + F +
Sbjct: 163 TFPSLLKGSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLV--TSYSKFMSVEDAQKVFDE 220
Query: 74 LSS-PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
L +WN ++ GYS +L +F KM G+ T + A + +
Sbjct: 221 LPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDN 280
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G S+H +KTG D + N+LI MY G W +
Sbjct: 281 GRSIHGLAVKTGSGSDIVVSNALIDMY---GKSKWLEE---------------------- 315
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
A+ +FE+M ERD+ +W+S++ + G++ +A+FE+M G + + VT+ +V
Sbjct: 316 ------ANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTV 369
Query: 253 LCACAHLGALEKGKMMHKYIVDNGL----PLTLVLQTSLVDMYAKCGAIEEALLVFHGVS 308
L C L +L +G+ +H Y++ +GL + SL+DMY KCG + +A +VF S
Sbjct: 370 LPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFD--S 427
Query: 309 KRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEA 368
R D WN MI G E +L +F M G+K DE+T+ H G + E
Sbjct: 428 MRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEG 487
Query: 369 WHFFESLDKC-GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCI 427
+F ++ + P+S+HYAC++D+L RA +L AY+ P+ + ++LS C
Sbjct: 488 RNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCR 547
Query: 428 NHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGF 487
H N +LA + G++L ELEP+H G Y+ +SNVY ++++ +R+AM ++ VKK+PG
Sbjct: 548 LHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGC 607
Query: 488 SSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQM 523
S + + F ++TH + + + L+ V M
Sbjct: 608 SWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISHM 643
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 84/161 (52%), Gaps = 3/161 (1%)
Query: 185 SMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKA 244
S+++ YAKCG M A VF SERDV +++LI G+V G +AM + +MRA G
Sbjct: 101 SLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILP 159
Query: 245 NEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVF 304
++ T S+L + L K +H G + + LV Y+K ++E+A VF
Sbjct: 160 DKYTFPSLLKGSDAM-ELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVF 218
Query: 305 HGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGI 345
+ R D ++WNA++ G + E++L +F M+ G+
Sbjct: 219 DELPDRD-DSVLWNALVNGYSQIFRFEDALLVFSKMREEGV 258
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 4/109 (3%)
Query: 245 NEVTMVSVLCACAHLGALEKGKMMHKYIVDNG-LPLTLVLQTSLVDMYAKCGAIEEALLV 303
N T ++ L CA G+ +H ++V G L + TSLV+MYAKCG + A+LV
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 304 FHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
F G + DV +NA+I G +GS +++ +++M+A GI D+ T+
Sbjct: 119 FGGSER---DVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTF 164
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 144/488 (29%), Positives = 238/488 (48%), Gaps = 35/488 (7%)
Query: 71 FSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHG-LAPDYLTYPFLAKASARLLN 129
F +++ + W +I GY + +FL+M + G + + T + KA +
Sbjct: 231 FDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVR 290
Query: 130 QETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDG 189
G +H + + E+D F+ NSL+ MY+ G + A VF ++ K+ VSWNS++ G
Sbjct: 291 YREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITG 350
Query: 190 YAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGE----------------------- 226
+ ++ A+++FE M +D+ SW+ +I G+ GE
Sbjct: 351 LVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMI 410
Query: 227 --------YREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLP 278
Y EA+ F KM N T SVL A A L L +G +H +V +
Sbjct: 411 SAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIV 470
Query: 279 LTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFK 338
L +Q SLV MY KCG +A +F +S+ +++ +N MI G + +G +++L LF
Sbjct: 471 NDLSVQNSLVSMYCKCGNTNDAYKIFSCISE--PNIVSYNTMISGYSYNGFGKKALKLFS 528
Query: 339 DMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKC-GMTPSSEHYACMVDVLARA 397
+++ G + + VT+ H G V W +F+S+ + P +HYACMVD+L R+
Sbjct: 529 MLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRS 588
Query: 398 GQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLS 457
G L A I MP +P + + G+LLS H +LAE+ +KLIELEPD Y+ LS
Sbjct: 589 GLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLS 648
Query: 458 NVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLN 517
+Y+ + + D + + + +KK PG S + + G F+A D++ + EE L
Sbjct: 649 QLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGFTLK 708
Query: 518 FVAYQMKL 525
+ +M+L
Sbjct: 709 MIRKEMEL 716
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 131/284 (46%), Gaps = 18/284 (6%)
Query: 148 DRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMS 207
D N L+ Y G A +VF + K +VS +SM+ GY K G +V A +F+ M+
Sbjct: 176 DSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMT 235
Query: 208 ERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGP-KANEVTMVSVLCACAHLGALEKGK 266
ER+V +W+++IDGY KAG + + +F +MR G K N T+ + AC +G
Sbjct: 236 ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGS 295
Query: 267 MMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLAT 326
+H + L L L SL+ MY+K G + EA VF GV K K D + WN++I GL
Sbjct: 296 QIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVF-GVMKNK-DSVSWNSLITGLVQ 353
Query: 327 HGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEH 386
+ E+ LF+ M D V++ G + + F GM P ++
Sbjct: 354 RKQISEAYELFEKMPG----KDMVSWTDMIKGFSGKGEISKCVELF------GMMPEKDN 403
Query: 387 --YACMVDVLARAGQLATA---YQFICQMPMEPTASMLGALLSG 425
+ M+ G A + + Q + P + ++LS
Sbjct: 404 ITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSA 447
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 124/280 (44%), Gaps = 41/280 (14%)
Query: 57 ALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLT 116
S G+I F + W +I + ++ ++L F KML+ + P+ T
Sbjct: 381 GFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYT 440
Query: 117 YPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQ 176
+ + A+A L + G+ +H ++K D +QNSL+ MY CGN A+K+F +
Sbjct: 441 FSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS 500
Query: 177 EKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEK 236
E N+VS+N+M+ GY+ +G+ K +A+ +F
Sbjct: 501 EPNIVSYNTMISGYS--------------------------YNGFGK-----KALKLFSM 529
Query: 237 MRAVGPKANEVTMVSVLCACAHLGALEKG-----KMMHKYIVDNGLPLTLVLQTSLVDMY 291
+ + G + N VT +++L AC H+G ++ G M Y ++ G +VD+
Sbjct: 530 LESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPD----HYACMVDLL 585
Query: 292 AKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVE 331
+ G +++A + + K +W +++ TH V+
Sbjct: 586 GRSGLLDDASNLISTMPC-KPHSGVWGSLLSASKTHLRVD 624
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 44/229 (19%)
Query: 150 FIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESM--- 206
F NS I +A GN+ A +F + +++VSW +M+ YA+ G+M A +VF+ M
Sbjct: 51 FQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVR 110
Query: 207 -----------------------------SERDVRSWSSLIDGYVKAGEYREAMAVFEKM 237
E++ S++++I G+V+AG + EA E +
Sbjct: 111 VTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEA----EFL 166
Query: 238 RAVGP-KANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQ-TSLVDMYAKCG 295
A P K + +VL + G L GK V G+ + V+ +S+V Y K G
Sbjct: 167 YAETPVKFRDSVASNVLLS----GYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMG 222
Query: 296 AIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVG 344
I +A +F +++R +V+ W AMI G G E+ GLF M+ G
Sbjct: 223 RIVDARSLFDRMTER--NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEG 269
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 215/409 (52%), Gaps = 34/409 (8%)
Query: 82 WNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHII 141
WNT+++GY K ++ + +F K+ G+ D + + + + + G S+H +++
Sbjct: 401 WNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVV 460
Query: 142 KTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHK 201
KT + + NSLI D Y K G++ +A +
Sbjct: 461 KTSLDLTISVVNSLI-------------------------------DLYGKMGDLTVAWR 489
Query: 202 VFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGA 261
+F ++ +V +W+++I YV + +A+A+F++M + K + +T+V++L AC + G+
Sbjct: 490 MF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGS 548
Query: 262 LEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMI 321
LE+G+M+H+YI + + L L +L+DMYAKCG +E++ +F +++ D + WN MI
Sbjct: 549 LERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQK--DAVCWNVMI 606
Query: 322 GGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMT 381
G HG VE ++ LF M+ +K T+ H GLV++ F + + +
Sbjct: 607 SGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVK 666
Query: 382 PSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRK 441
P+ +HY+C+VD+L+R+G L A + MP P + G LLS C+ H FE+ + +
Sbjct: 667 PNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAER 726
Query: 442 LIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSV 490
+ +P +DG YI L+N+Y+ +W++A RE M GV K G S V
Sbjct: 727 AVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 169/335 (50%), Gaps = 37/335 (11%)
Query: 20 LLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRI 79
L D S+ L++ +A++IT GLS++ SK++ S+ ++ G + S R F ++ I
Sbjct: 33 LCDQSLSLESLRKHNALIITGGLSENIFVASKLI--SSYASYGKPNLSSRVFHLVTRRDI 90
Query: 80 FIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAH 139
F+WN+II+ + ++ + +SL F ML G +PD+ T P + A A LL G VH
Sbjct: 91 FLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGL 150
Query: 140 IIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLA 199
++K H FD +N S + Y+KCG + A
Sbjct: 151 VLK--------------------------HGGFD----RNTAVGASFVYFYSKCGFLQDA 180
Query: 200 HKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGP---KANEVTMVSVLCAC 256
VF+ M +RDV +W+++I G+V+ GE + KM + G K N T+ AC
Sbjct: 181 CLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQAC 240
Query: 257 AHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLI 316
++LGAL++G+ +H + V NGL + +Q+S+ Y+K G EA L F + D+
Sbjct: 241 SNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDE--DMFS 298
Query: 317 WNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVT 351
W ++I LA G +EES +F +MQ G+ D V
Sbjct: 299 WTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVV 333
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 175/396 (44%), Gaps = 38/396 (9%)
Query: 15 QTLLSLLDGCKSMLELKQ---LHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAF 71
+TL C ++ LK+ LH + +GL+ + F+ + FS S SG+ +Y +F
Sbjct: 231 RTLECGFQACSNLGALKEGRCLHGFAVKNGLASSK-FVQSSM-FSFYSKSGNPSEAYLSF 288
Query: 72 SQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQE 131
+L +F W +II + S + +S +F +M G+ PD + L +++
Sbjct: 289 RELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVP 348
Query: 132 TGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYA 191
G + H +I+ D + NSL+ MY + A K+F + E
Sbjct: 349 QGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISE-------------- 394
Query: 192 KCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVS 251
E + +W++++ GY K + + + +F K++ +G + + + S
Sbjct: 395 ----------------EGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATS 438
Query: 252 VLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRK 311
V+ +C+H+GA+ GK +H Y+V L LT+ + SL+D+Y K G + A +F +
Sbjct: 439 VISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF---CEAD 495
Query: 312 TDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHF 371
T+V+ WNAMI E+++ LF M + K +T + G ++
Sbjct: 496 TNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMI 555
Query: 372 FESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFI 407
+ + + A ++D+ A+ G L + +
Sbjct: 556 HRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELF 591
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 135/305 (44%), Gaps = 43/305 (14%)
Query: 31 KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYS 90
K LH ++ + L ++ ++ GD+ ++R F + + + WN +I Y
Sbjct: 453 KSLHCYVVKTSLDLTISVVNSLI--DLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYV 509
Query: 91 NSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRF 150
+ + +++++F +M+ P +T L A + E G +H +I +T HE +
Sbjct: 510 HCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLS 569
Query: 151 IQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERD 210
+ +LI MY AKCG + + ++F++ +++D
Sbjct: 570 LSAALIDMY-------------------------------AKCGHLEKSRELFDAGNQKD 598
Query: 211 VRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGK---- 266
W+ +I GY G+ A+A+F++M K T +++L AC H G +E+GK
Sbjct: 599 AVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFL 658
Query: 267 MMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLAT 326
MH+Y V L + LVD+ ++ G +EEA + D +IW ++ T
Sbjct: 659 KMHQYDVKPNLK----HYSCLVDLLSRSGNLEEAESTVMSM-PFSPDGVIWGTLLSSCMT 713
Query: 327 HGSVE 331
HG E
Sbjct: 714 HGEFE 718
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 133/445 (29%), Positives = 232/445 (52%), Gaps = 11/445 (2%)
Query: 49 ISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRH 108
+S + F L + G ID + + + + + +I G ++ IF +M
Sbjct: 142 VSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRER 201
Query: 109 GLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWA 168
+ +T+ + Q V V + + E S++ Y G I A
Sbjct: 202 NV----VTWTTMITG----YRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDA 253
Query: 169 HKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYR 228
+ F+ + K +++ N+M+ G+ + GE+ A +VF+ M +RD +W +I Y + G
Sbjct: 254 EEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFEL 313
Query: 229 EAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLV 288
EA+ +F +M+ G + + +++S+L CA L +L+ G+ +H ++V + + + L+
Sbjct: 314 EALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLM 373
Query: 289 DMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKAD 348
MY KCG + +A LVF S + D+++WN++I G A+HG EE+L +F +M + G +
Sbjct: 374 TMYVKCGELVKAKLVFDRFSSK--DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPN 431
Query: 349 EVTYXXXXXXXXHGGLVKEAWHFFESLD-KCGMTPSSEHYACMVDVLARAGQLATAYQFI 407
+VT + G ++E FES++ K +TP+ EHY+C VD+L RAGQ+ A + I
Sbjct: 432 KVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELI 491
Query: 408 CQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWD 467
M ++P A++ GALL C H +LAE+ +KL E EPD+ G Y+ LS++ A +W
Sbjct: 492 ESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWG 551
Query: 468 DARGMREAMERRGVKKSPGFSSVEI 492
D +R+ M V K PG S +E+
Sbjct: 552 DVAVVRKNMRTNNVSKFPGCSWIEV 576
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 141/285 (49%), Gaps = 26/285 (9%)
Query: 153 NSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVR 212
NS++ Y S G A ++FD + E+N+VSWN ++ GY K +V A VFE M ER+V
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 213 SWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYI 272
SW++++ GY++ G EA ++F +M P+ NEV+ + G ++K + ++
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRM----PERNEVSWTVMFGGLIDDGRIDKARKLY--- 164
Query: 273 VDNGLPLT-LVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVE 331
+ +P+ +V T+++ + G ++EA L+F + +R +V+ W MI G + V+
Sbjct: 165 --DMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRER--NVVTWTTMITGYRQNNRVD 220
Query: 332 ESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYAC-- 389
+ LF+ M + EV++ G +++A FFE + P AC
Sbjct: 221 VARKLFEVMP----EKTEVSWTSMLLGYTLSGRIEDAEEFFEVM------PMKPVIACNA 270
Query: 390 MVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFEL 434
M+ G+++ A + M A+ G + + + FEL
Sbjct: 271 MIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKA--YERKGFEL 313
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 155/337 (45%), Gaps = 28/337 (8%)
Query: 156 IHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWS 215
I + G I A K FDS+Q K + SWNS++ GY G A ++F+ MSER+V SW+
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 216 SLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDN 275
L+ GY+K EA VFE M P+ N V+ +++ G + + + + + +
Sbjct: 84 GLVSGYIKNRMIVEARNVFELM----PERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER 139
Query: 276 GLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLG 335
V+ L+D G I++A ++ + + DV+ MIGGL G V+E+
Sbjct: 140 NEVSWTVMFGGLID----DGRIDKARKLYDMMPVK--DVVASTNMIGGLCREGRVDEARL 193
Query: 336 LFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLA 395
+F +M+ + VT+ V A FE + + + + M+
Sbjct: 194 IFDEMRERNV----VTWTTMITGYRQNNRVDVARKLFEVMPE----KTEVSWTSMLLGYT 245
Query: 396 RAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIV-GRKLIELEPDHD-GRY 453
+G++ A +F MPM+P + A++ G E+ EI R++ +L D D +
Sbjct: 246 LSGRIEDAEEFFEVMPMKPVIA-CNAMIVGF-----GEVGEISKARRVFDLMEDRDNATW 299
Query: 454 IGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSV 490
G+ Y +A + M+++GV+ P F S+
Sbjct: 300 RGMIKAYERKGFELEALDLFAQMQKQGVR--PSFPSL 334
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 151/354 (42%), Gaps = 37/354 (10%)
Query: 55 FSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLR------H 108
S LS G I+ + + F L I WN+I+ GY ++ P ++ +F +M +
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 109 GLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWA 168
GL Y+ + +A ++ + E + +++ Y G + A
Sbjct: 84 GLVSGYIKNRMIVEAR--------------NVFELMPERNVVSWTAMVKGYMQEGMVGEA 129
Query: 169 HKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYR 228
+F + E+N VSW M G G + A K+++ M +DV + +++I G + G
Sbjct: 130 ESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVD 189
Query: 229 EAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLV 288
EA +F++MR + N VT +++ ++ + + + + + T V TS++
Sbjct: 190 EARLIFDEMR----ERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK----TEVSWTSML 241
Query: 289 DMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKAD 348
Y G IE+A F + + V+ NAMI G G + ++ +F M+ D
Sbjct: 242 LGYTLSGRIEDAEEFFEVMPMKP--VIACNAMIVGFGEVGEISKARRVFDLME----DRD 295
Query: 349 EVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLAT 402
T+ G EA F + K G+ PS + ++ +L+ LA+
Sbjct: 296 NATWRGMIKAYERKGFELEALDLFAQMQKQGVRPS---FPSLISILSVCATLAS 346
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/468 (29%), Positives = 243/468 (51%), Gaps = 21/468 (4%)
Query: 31 KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYS 90
K LH+ I G+ D S ++ S G + + + F ++ + WN +I GY
Sbjct: 66 KLLHSESIKFGVCSDVMVGSSLI--SMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYM 123
Query: 91 NSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHI---IKTGHEY 147
++ + + + +F ++ + + +T+ + K + + E + + +K +
Sbjct: 124 SNGDAVLASGLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAW 180
Query: 148 DRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMS 207
+ ++ +Y + + A K F+ + EKN W+ M+ GY + G++ A +F +
Sbjct: 181 -----SVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVF 235
Query: 208 ERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKM 267
RD+ W++LI GY + G +A+ F M+ G + + VT+ S+L ACA G L+ G+
Sbjct: 236 ARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGRE 295
Query: 268 MHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATH 327
+H I G+ L + +L+DMYAKCG +E A VF +S R V N+MI LA H
Sbjct: 296 VHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVR--SVACCNSMISCLAIH 353
Query: 328 GSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHY 387
G +E+L +F M+++ +K DE+T+ HGG + E F + + P+ +H+
Sbjct: 354 GKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHF 413
Query: 388 ACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEP 447
C++ +L R+G+L AY+ + +M ++P ++LGALL C H + E+AE V K+IE
Sbjct: 414 GCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQV-MKIIETAG 472
Query: 448 DHDGRY-----IGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSV 490
Y +SN+YA +RW A +R ME+RG++KSPG SS+
Sbjct: 473 SITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSL 520
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 162/328 (49%), Gaps = 21/328 (6%)
Query: 83 NTIIRGYSNSKNPIQSLSIFLKMLRHGLA-PDYLTYPFLAKASARLLNQET-GVSVHAHI 140
+ +I+ + + +PIQ+L ++ + R G+ P ++ P + +A A ++ + G +H+
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWV--PLILRACACVVPRVVLGKLLHSES 72
Query: 141 IKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAH 200
IK G D + +SLI MY CG +V A KVFD + E+N+ +WN+M+ GY G+ VLA
Sbjct: 73 IKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLAS 132
Query: 201 KVFESMSE-RDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHL 259
+FE +S R+ +W +I GY K E +A +FE+M + V SV+ L
Sbjct: 133 GLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPF---ELKNVKAWSVM-----L 184
Query: 260 GALEKGKMM---HKYIVDNGLPLTLVLQTSL-VDMYAKCGAIEEALLVFHGVSKRKTDVL 315
G + M K+ D +P SL + Y + G + EA +F+ V R D++
Sbjct: 185 GVYVNNRKMEDARKFFED--IPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFAR--DLV 240
Query: 316 IWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESL 375
IWN +I G A +G ++++ F +MQ G + D VT G + +
Sbjct: 241 IWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLI 300
Query: 376 DKCGMTPSSEHYACMVDVLARAGQLATA 403
+ G+ + ++D+ A+ G L A
Sbjct: 301 NHRGIELNQFVSNALIDMYAKCGDLENA 328
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 147/518 (28%), Positives = 265/518 (51%), Gaps = 41/518 (7%)
Query: 11 ANLNQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRA 70
AN++ +L++ + C S+ + LH ++ S +S FI L L D+ + +
Sbjct: 32 ANVS-SLIAAVKSCVSIELCRLLHCKVVKS-VSYRHGFIGDQLVGCYLRLGHDV-CAEKL 88
Query: 71 FSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKML--RHGLAPDYLTYPFLAKASARLL 128
F ++ + WN++I GYS + + +M+ G P+ +T+ + A
Sbjct: 89 FDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGG 148
Query: 129 NQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLD 188
++E G +H ++K F ++E +V N+ ++
Sbjct: 149 SKEEGRCIHGLVMK-----------------------------FGVLEEVKVV--NAFIN 177
Query: 189 GYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVT 248
Y K G++ + K+FE +S +++ SW+++I +++ G + +A F R VG + ++ T
Sbjct: 178 WYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQAT 237
Query: 249 MVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVS 308
++VL +C +G + + +H I+ G + T+L+D+Y+K G +E++ VFH ++
Sbjct: 238 FLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEIT 297
Query: 309 KRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEA 368
D + W AM+ ATHG +++ F+ M GI D VT+ H GLV+E
Sbjct: 298 S--PDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEG 355
Query: 369 WHFFESLDK-CGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCI 427
H+FE++ K + P +HY+CMVD+L R+G L AY I +MPMEP++ + GALL C
Sbjct: 356 KHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACR 415
Query: 428 NHRNFELAEIVGRKLIELEPDHDGR-YIGLSNVYAGVKRWDDARGMREAMERRGVKKSPG 486
+++ +L +L ELEP DGR Y+ LSN+Y+ W DA +R M+++G+ ++ G
Sbjct: 416 VYKDTQLGTKAAERLFELEP-RDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASG 474
Query: 487 FSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
S +E +F+ D +H +SE+ L + +MK
Sbjct: 475 CSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMK 512
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 165/572 (28%), Positives = 271/572 (47%), Gaps = 80/572 (13%)
Query: 14 NQTLLSLLDGCKSM-LELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
TL+ ++ C+S+ + +++H +I SG + +LC A S+S + + F
Sbjct: 127 TSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS---ARKLFD 183
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHG-LAPDYLTYPFLAKASARLLNQE 131
++S + W+ +IR Y SK P+ L +F +M+ PD +T + KA + + +
Sbjct: 184 EMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDID 243
Query: 132 TGVSVHAHIIKTGHEY-DRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGY 190
G SVH I+ G + D F+ NSLI MY+ ++ A +VFD +N+VSWNS+L G+
Sbjct: 244 VGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGF 303
Query: 191 AKCGEMVLAHKVFESMSERDVR-------------------------------------- 212
A ++F M + V
Sbjct: 304 VHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNE 363
Query: 213 -SWSSLIDGYVKAGEYREAMAVFEKM----------------------RAVG------PK 243
+ SSLID Y +A V + M A+
Sbjct: 364 VALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT 423
Query: 244 ANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLT-LVLQTSLVDMYAKCGAIEEALL 302
N +T++S+L AC+ L K H + L + + + TS+VD YAKCGAIE A
Sbjct: 424 PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARR 483
Query: 303 VFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHG 362
F ++++ +++ W +I A +G +++L LF +M+ G + VTY HG
Sbjct: 484 TFDQITEK--NIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHG 541
Query: 363 GLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMP--MEPTASMLG 420
GLVK+ F+S+ + PS +HY+C+VD+L+RAG++ TA + I +P ++ AS G
Sbjct: 542 GLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWG 601
Query: 421 ALLSGCINH-RNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERR 479
A+LSGC N + + V +++ELEP Y+ S+ +A K W+D MR ++ R
Sbjct: 602 AILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKER 661
Query: 480 GVKKSPGFSSVEICGVSRRFIAHDK-THSDSE 510
V+ G+S V +++RF+A DK + SDSE
Sbjct: 662 KVRVVAGYSMVREGNLAKRFLAGDKLSQSDSE 693
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 164/398 (41%), Gaps = 69/398 (17%)
Query: 62 GDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLA 121
GD+ R F ++S WN I+ G + + L F K+ G P+ T +
Sbjct: 75 GDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVI 134
Query: 122 KASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLV 181
A L G +H ++I++G +QNS++ MYA
Sbjct: 135 HACRSLWFD--GEKIHGYVIRSGFCGISSVQNSILCMYAD-------------------- 172
Query: 182 SWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKM-RAV 240
+ + A K+F+ MSERDV SWS +I YV++ E + +F++M
Sbjct: 173 ------------SDSLSARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEA 220
Query: 241 GPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQ-TSLVDMYAKCGAIEE 299
+ + VT+ SVL AC + ++ G+ +H + + G L V SL+DMY+K ++
Sbjct: 221 KTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDS 280
Query: 300 ALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXX- 358
A VF + R +++ WN+++ G + +E+L +F M ++ DEVT
Sbjct: 281 AFRVFDETTCR--NIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVC 338
Query: 359 ----------XXHGGLVKEAWHFFES--------------LDKCGMTPSSEHY------A 388
HG +++ + E +D G S Y +
Sbjct: 339 KFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCS 398
Query: 389 CMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGC 426
M+ LA AG+ A C M P A + +LL+ C
Sbjct: 399 TMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNAC 436
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 21/208 (10%)
Query: 134 VSVHAHIIKTGHEY-DRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
VS ++ I + G ++ D F+ ++ +C + W L NS+ D Y K
Sbjct: 29 VSGYSEIQRAGVQFNDPFV---FPIVFKACAKLSW------------LFQGNSIADFYMK 73
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
CG++ + F+ M+ RD SW+ ++ G + G E + F K+R G + N T+V V
Sbjct: 74 CGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLV 133
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT 312
+ AC L G+ +H Y++ +G +Q S++ MYA ++ A +F +S+R
Sbjct: 134 IHACRSLWF--DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSER-- 188
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDM 340
DV+ W+ +I L LFK+M
Sbjct: 189 DVISWSVVIRSYVQSKEPVVGLKLFKEM 216
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 141/468 (30%), Positives = 241/468 (51%), Gaps = 10/468 (2%)
Query: 59 SNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYP 118
+ SG ID + F ++ I WN++++ +++++F +M R D +++
Sbjct: 151 AQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWT 206
Query: 119 FLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK 178
+ L + V + E + N++I YA I A ++F + E+
Sbjct: 207 AMVDG----LAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPER 262
Query: 179 NLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKM- 237
+ SWN+M+ G+ + EM A +F+ M E++V SW+++I GYV+ E EA+ VF KM
Sbjct: 263 DFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKML 322
Query: 238 RAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAI 297
R K N T VS+L AC+ L L +G+ +H+ I + ++ ++L++MY+K G +
Sbjct: 323 RDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGEL 382
Query: 298 EEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXX 357
A +F + D++ WN+MI A HG +E++ ++ M+ G K VTY
Sbjct: 383 IAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLF 442
Query: 358 XXXHGGLVKEAWHFFESLDKCGMTP-SSEHYACMVDVLARAGQLATAYQFICQMPMEPTA 416
H GLV++ FF+ L + P EHY C+VD+ RAG+L FI +
Sbjct: 443 ACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSR 502
Query: 417 SMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAM 476
S GA+LS C H +A+ V +K++E D G Y+ +SN+YA + ++A MR M
Sbjct: 503 SFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKM 562
Query: 477 ERRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
+ +G+KK PG S V++ + F+ DK+H E S+L+ + +M+
Sbjct: 563 KEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMR 610
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 139/290 (47%), Gaps = 20/290 (6%)
Query: 155 LIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESM-SERDVRS 213
LI G I A K+FD + E+++V+W ++ GY K G+M A ++F+ + S ++V +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 214 WSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIV 273
W++++ GY+++ + A +F++M P+ N V+ +++ A G ++K +
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEM----PERNVVSWNTMIDGYAQSGRIDKA----LELF 163
Query: 274 DNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEES 333
D +V S+V + G I+EA+ +F + +R DV+ W AM+ GLA +G V+E+
Sbjct: 164 DEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR--DVVSWTAMVDGLAKNGKVDEA 221
Query: 334 LGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDV 393
LF M I +++ + EA F+ + + + M+
Sbjct: 222 RRLFDCMPERNI----ISWNAMITGYAQNNRIDEADQLFQVMPERDFAS----WNTMITG 273
Query: 394 LARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLI 443
R ++ A +MP E +++G + ++ E A V K++
Sbjct: 274 FIRNREMNKACGLFDRMP-EKNVISWTTMITGYVENKENEEALNVFSKML 322
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 163/373 (43%), Gaps = 31/373 (8%)
Query: 58 LSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTY 117
L G I + + F L + W +I GY + ++ +F ++ + +T+
Sbjct: 56 LCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV---DSRKNVVTW 112
Query: 118 PFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQE 177
+ R +S+ + + E + N++I YA G I A ++FD + E
Sbjct: 113 TAMVSGYLR----SKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPE 168
Query: 178 KNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKM 237
+N+VSWNSM+ + G + A +FE M RDV SW++++DG K G+ EA +F+ M
Sbjct: 169 RNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCM 228
Query: 238 RAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLV---DMYAKC 294
P+ N ++ +++ A +++ + + + + + T + +M C
Sbjct: 229 ----PERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKAC 284
Query: 295 GAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVG-IKADEVTYX 353
G +F + ++ +V+ W MI G + EE+L +F M G +K + TY
Sbjct: 285 G-------LFDRMPEK--NVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYV 335
Query: 354 XXXXXXXH-GGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQ-----FI 407
GLV E + + K + + ++++ +++G+L A + +
Sbjct: 336 SILSACSDLAGLV-EGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLV 394
Query: 408 CQMPMEPTASMLG 420
CQ + SM+
Sbjct: 395 CQRDLISWNSMIA 407
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 143/496 (28%), Positives = 236/496 (47%), Gaps = 41/496 (8%)
Query: 33 LHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNS 92
LH +++ SGL ++ I L S G++ S R Q+ + WN +I GY+
Sbjct: 367 LHGLVVVSGLFYNQ-IIGNALV-SMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAED 424
Query: 93 KNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQ---ETGVSVHAHIIKTGHEYDR 149
++P ++L+ F M G++ +Y+T ++ SA LL E G +HA+I+ G E D
Sbjct: 425 EDPDKALAAFQTMRVEGVSSNYIT--VVSVLSACLLPGDLLERGKPLHAYIVSAGFESDE 482
Query: 150 FIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSER 209
++NSLI MYA KCG++ + +F + R
Sbjct: 483 HVKNSLITMYA-------------------------------KCGDLSSSQDLFNGLDNR 511
Query: 210 DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMH 269
++ +W++++ G E + + KMR+ G ++ + L A A L LE+G+ +H
Sbjct: 512 NIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLH 571
Query: 270 KYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGS 329
V G + + DMY+KCG I E + + R WN +I L HG
Sbjct: 572 GLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPS--WNILISALGRHGY 629
Query: 330 VEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDK-CGMTPSSEHYA 388
EE F +M +GIK VT+ HGGLV + +++ + + G+ P+ EH
Sbjct: 630 FEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCI 689
Query: 389 CMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPD 448
C++D+L R+G+LA A FI +MPM+P + +LL+ C H N + L +LEP+
Sbjct: 690 CVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPE 749
Query: 449 HDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAHDKTHSD 508
D Y+ SN++A RW+D +R+ M + +KK S V++ F D+TH
Sbjct: 750 DDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQ 809
Query: 509 SEETYSMLNFVAYQMK 524
+ E Y+ L + +K
Sbjct: 810 TMEIYAKLEDIKKLIK 825
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 150/321 (46%), Gaps = 35/321 (10%)
Query: 31 KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYS 90
+Q+ ++ SGL + ++ S L + G++DY+ F Q+S WN+I Y+
Sbjct: 163 RQIIGQVVKSGLESKLAVENSLI--SMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 220
Query: 91 NSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRF 150
+ + +S IF M R + T L + +Q+ G +H ++K G
Sbjct: 221 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG------ 274
Query: 151 IQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERD 210
FDSV + N++L YA G V A+ VF+ M +D
Sbjct: 275 ---------------------FDSV----VCVCNTLLRMYAGAGRSVEANLVFKQMPTKD 309
Query: 211 VRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHK 270
+ SW+SL+ +V G +A+ + M + G N VT S L AC EKG+++H
Sbjct: 310 LISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHG 369
Query: 271 YIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSV 330
+V +GL ++ +LV MY K G + E+ V + +R DV+ WNA+IGG A
Sbjct: 370 LVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRR--DVVAWNALIGGYAEDEDP 427
Query: 331 EESLGLFKDMQAVGIKADEVT 351
+++L F+ M+ G+ ++ +T
Sbjct: 428 DKALAAFQTMRVEGVSSNYIT 448
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 175/411 (42%), Gaps = 41/411 (9%)
Query: 3 GVSPS-FKIANLNQTLLSLLDGCKSML-ELKQLHAILITSGLSQDEPFISKVLCFSALSN 60
G+ PS F IA +L++ SM E Q+H + SGL D + +L +
Sbjct: 36 GIKPSSFVIA----SLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVY- 90
Query: 61 SGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFL 120
G + S + F ++ + W +++ GYS+ P + + I+ M G+ + + +
Sbjct: 91 -GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLV 149
Query: 121 AKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNL 180
+ L ++ G + ++K+G E ++NSLI M S GN+ +A+ +
Sbjct: 150 ISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYI--------- 200
Query: 181 VSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAV 240
F+ MSERD SW+S+ Y + G E+ +F MR
Sbjct: 201 ----------------------FDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF 238
Query: 241 GPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEA 300
+ N T+ ++L H+ + G+ +H +V G + + +L+ MYA G EA
Sbjct: 239 HDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 298
Query: 301 LLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXX 360
LVF + + D++ WN+++ G ++LGL M + G + VT+
Sbjct: 299 NLVFKQMPTK--DLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACF 356
Query: 361 HGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMP 411
++ + G+ + +V + + G+++ + + + QMP
Sbjct: 357 TPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 407
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 145/321 (45%), Gaps = 39/321 (12%)
Query: 16 TLLSLLDGC---KSMLEL-KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAF 71
T++S+L C +LE K LHA ++++G DE + ++ A GD+ S F
Sbjct: 448 TVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYA--KCGDLSSSQDLF 505
Query: 72 SQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQE 131
+ L + I WN ++ ++ + + L + KM G++ D ++ A+A+L E
Sbjct: 506 NGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLE 565
Query: 132 TGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYA 191
G +H +K G E+D FI N+ MY+ CG I
Sbjct: 566 EGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEI-------------------------- 599
Query: 192 KCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVS 251
GE+V K+ R + SW+ LI + G + E A F +M +G K VT VS
Sbjct: 600 --GEVV---KMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVS 654
Query: 252 VLCACAHLGALEKGKMMHKYIV-DNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR 310
+L AC+H G ++KG + I D GL + ++D+ + G + EA + +
Sbjct: 655 LLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMK 714
Query: 311 KTDVLIWNAMIGGLATHGSVE 331
D L+W +++ HG+++
Sbjct: 715 PND-LVWRSLLASCKIHGNLD 734
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 119/261 (45%), Gaps = 34/261 (13%)
Query: 82 WNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQ-ETGVSVHAHI 140
WNT++ G ++ + F KM G+ P L A R + GV VH +
Sbjct: 9 WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 68
Query: 141 IKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAH 200
K+G D ++ +++H+Y G LVS +
Sbjct: 69 AKSGLLSDVYVSTAILHLYGVYG----------------LVS---------------CSR 97
Query: 201 KVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLG 260
KVFE M +R+V SW+SL+ GY GE E + +++ MR G NE +M V+ +C L
Sbjct: 98 KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLK 157
Query: 261 ALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAM 320
G+ + +V +GL L ++ SL+ M G ++ A +F +S+R D + WN++
Sbjct: 158 DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSER--DTISWNSI 215
Query: 321 IGGLATHGSVEESLGLFKDMQ 341
A +G +EES +F M+
Sbjct: 216 AAAYAQNGHIEESFRIFSLMR 236
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 206 MSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGAL-EK 264
M R+ SW++++ G V+ G Y E M F KM +G K + + S++ AC G++ +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 265 GKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGL 324
G +H ++ +GL + + T+++ +Y G + + VF + R +V+ W +++ G
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR--NVVSWTSLMVGY 118
Query: 325 ATHGSVEESLGLFKDMQAVGIKADE 349
+ G EE + ++K M+ G+ +E
Sbjct: 119 SDKGEPEEVIDIYKGMRGEGVGCNE 143
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 129/471 (27%), Positives = 242/471 (51%), Gaps = 6/471 (1%)
Query: 60 NSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPF 119
+S I +++ F ++ + +I + +++ F ++L G+ P+ T+
Sbjct: 39 DSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGT 98
Query: 120 LAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKN 179
+ +S + + G +H + +K G + F+ +++++ Y + A + FD ++ N
Sbjct: 99 VIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPN 158
Query: 180 LVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRA 239
+VS +++ GY K E A +F +M ER V +W+++I G+ + G EA+ F M
Sbjct: 159 VVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLR 218
Query: 240 VGPK-ANEVTMVSVLCACAHLGALEKGKMMHKYIVDN-GLPLTLVLQTSLVDMYAKCGAI 297
G NE T + A +++ + GK +H + G + + SL+ Y+KCG +
Sbjct: 219 EGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNM 278
Query: 298 EEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDM-QAVGIKADEVTYXXXX 356
E++LL F+ + + + +++ WN+MI G A +G EE++ +F+ M + ++ + VT
Sbjct: 279 EDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVL 338
Query: 357 XXXXHGGLVKEAWHFFESLDKCGMTPSS---EHYACMVDVLARAGQLATAYQFICQMPME 413
H GL++E + +F P+ EHYACMVD+L+R+G+ A + I MP++
Sbjct: 339 FACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLD 398
Query: 414 PTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMR 473
P ALL GC H N LA++ K++EL+P Y+ LSN Y+ ++ W + +R
Sbjct: 399 PGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIR 458
Query: 474 EAMERRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
M+ G+K+ G S +E+ R F+ DK + +E Y ML V+ ++
Sbjct: 459 RKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHLE 509
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 140/295 (47%), Gaps = 40/295 (13%)
Query: 43 SQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIF 102
++D +S S + + + F + + WN +I G+S + ++++ F
Sbjct: 154 TRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTF 213
Query: 103 LKMLRHGLA-PDYLTYPFLAKASARLLNQETGVSVHAHIIK-TGHEYDRFIQNSLIHMYA 160
+ MLR G+ P+ T+P A + + + G S+HA IK G ++ F+ NSLI Y+
Sbjct: 214 VDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYS 273
Query: 161 SCGNIVWAHKVFDSVQE--KNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLI 218
CGN+ + F+ ++E +N+VSWNSM+ GYA G
Sbjct: 274 KCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGR----------------------- 310
Query: 219 DGYVKAGEYREAMAVFEKM-RAVGPKANEVTMVSVLCACAHLGALEKGKM-MHKYIVDNG 276
GE EA+A+FEKM + + N VT++ VL AC H G +++G M +K + D
Sbjct: 311 ------GE--EAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD 362
Query: 277 LPLTLVLQ--TSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGS 329
P L L+ +VDM ++ G +EA + + + W A++GG H +
Sbjct: 363 DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMP-LDPGIGFWKALLGGCQIHSN 416
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 225 bits (573), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 143/496 (28%), Positives = 236/496 (47%), Gaps = 41/496 (8%)
Query: 33 LHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNS 92
LH +++ SGL ++ I L S G++ S R Q+ + WN +I GY+
Sbjct: 384 LHGLVVVSGLFYNQ-IIGNALV-SMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAED 441
Query: 93 KNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQ---ETGVSVHAHIIKTGHEYDR 149
++P ++L+ F M G++ +Y+T ++ SA LL E G +HA+I+ G E D
Sbjct: 442 EDPDKALAAFQTMRVEGVSSNYIT--VVSVLSACLLPGDLLERGKPLHAYIVSAGFESDE 499
Query: 150 FIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSER 209
++NSLI MYA KCG++ + +F + R
Sbjct: 500 HVKNSLITMYA-------------------------------KCGDLSSSQDLFNGLDNR 528
Query: 210 DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMH 269
++ +W++++ G E + + KMR+ G ++ + L A A L LE+G+ +H
Sbjct: 529 NIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLH 588
Query: 270 KYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGS 329
V G + + DMY+KCG I E + + R WN +I L HG
Sbjct: 589 GLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPS--WNILISALGRHGY 646
Query: 330 VEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDK-CGMTPSSEHYA 388
EE F +M +GIK VT+ HGGLV + +++ + + G+ P+ EH
Sbjct: 647 FEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCI 706
Query: 389 CMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPD 448
C++D+L R+G+LA A FI +MPM+P + +LL+ C H N + L +LEP+
Sbjct: 707 CVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPE 766
Query: 449 HDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAHDKTHSD 508
D Y+ SN++A RW+D +R+ M + +KK S V++ F D+TH
Sbjct: 767 DDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQ 826
Query: 509 SEETYSMLNFVAYQMK 524
+ E Y+ L + +K
Sbjct: 827 TMEIYAKLEDIKKLIK 842
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 150/321 (46%), Gaps = 35/321 (10%)
Query: 31 KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYS 90
+Q+ ++ SGL + ++ S L + G++DY+ F Q+S WN+I Y+
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLI--SMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 237
Query: 91 NSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRF 150
+ + +S IF M R + T L + +Q+ G +H ++K G
Sbjct: 238 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG------ 291
Query: 151 IQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERD 210
FDSV + N++L YA G V A+ VF+ M +D
Sbjct: 292 ---------------------FDSV----VCVCNTLLRMYAGAGRSVEANLVFKQMPTKD 326
Query: 211 VRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHK 270
+ SW+SL+ +V G +A+ + M + G N VT S L AC EKG+++H
Sbjct: 327 LISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHG 386
Query: 271 YIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSV 330
+V +GL ++ +LV MY K G + E+ V + +R DV+ WNA+IGG A
Sbjct: 387 LVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRR--DVVAWNALIGGYAEDEDP 444
Query: 331 EESLGLFKDMQAVGIKADEVT 351
+++L F+ M+ G+ ++ +T
Sbjct: 445 DKALAAFQTMRVEGVSSNYIT 465
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 155/352 (44%), Gaps = 41/352 (11%)
Query: 3 GVSPS-FKIANLNQTLLSLLDGCKSML-ELKQLHAILITSGLSQDEPFISKVLCFSALSN 60
G+ PS F IA +L++ SM E Q+H + SGL D + +L +
Sbjct: 53 GIKPSSFVIA----SLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVY- 107
Query: 61 SGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFL 120
G + S + F ++ + W +++ GYS+ P + + I+ M G+ + + +
Sbjct: 108 -GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLV 166
Query: 121 AKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNL 180
+ L ++ G + ++K+G E ++NSLI M S GN+ +A+ +
Sbjct: 167 ISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYI--------- 217
Query: 181 VSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAV 240
F+ MSERD SW+S+ Y + G E+ +F MR
Sbjct: 218 ----------------------FDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF 255
Query: 241 GPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEA 300
+ N T+ ++L H+ + G+ +H +V G + + +L+ MYA G EA
Sbjct: 256 HDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 315
Query: 301 LLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
LVF + + D++ WN+++ G ++LGL M + G + VT+
Sbjct: 316 NLVFKQMPTK--DLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTF 365
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 152/340 (44%), Gaps = 39/340 (11%)
Query: 16 TLLSLLDGC---KSMLEL-KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAF 71
T++S+L C +LE K LHA ++++G DE + ++ A GD+ S F
Sbjct: 465 TVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYA--KCGDLSSSQDLF 522
Query: 72 SQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQE 131
+ L + I WN ++ ++ + + L + KM G++ D ++ A+A+L E
Sbjct: 523 NGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLE 582
Query: 132 TGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYA 191
G +H +K G E+D FI N+ MY+ CG I
Sbjct: 583 EGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEI-------------------------- 616
Query: 192 KCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVS 251
GE+V K+ R + SW+ LI + G + E A F +M +G K VT VS
Sbjct: 617 --GEVV---KMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVS 671
Query: 252 VLCACAHLGALEKGKMMHKYIV-DNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR 310
+L AC+H G ++KG + I D GL + ++D+ + G + EA + +
Sbjct: 672 LLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMK 731
Query: 311 KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEV 350
D L+W +++ HG+++ +++ + + D V
Sbjct: 732 PND-LVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSV 770
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 119/261 (45%), Gaps = 34/261 (13%)
Query: 82 WNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQ-ETGVSVHAHI 140
WNT++ G ++ + F KM G+ P L A R + GV VH +
Sbjct: 26 WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 85
Query: 141 IKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAH 200
K+G D ++ +++H+Y G LVS +
Sbjct: 86 AKSGLLSDVYVSTAILHLYGVYG----------------LVS---------------CSR 114
Query: 201 KVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLG 260
KVFE M +R+V SW+SL+ GY GE E + +++ MR G NE +M V+ +C L
Sbjct: 115 KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLK 174
Query: 261 ALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAM 320
G+ + +V +GL L ++ SL+ M G ++ A +F +S+R D + WN++
Sbjct: 175 DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSER--DTISWNSI 232
Query: 321 IGGLATHGSVEESLGLFKDMQ 341
A +G +EES +F M+
Sbjct: 233 AAAYAQNGHIEESFRIFSLMR 253
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 86/161 (53%), Gaps = 3/161 (1%)
Query: 190 YAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTM 249
Y K G + A +F+ M R+ SW++++ G V+ G Y E M F KM +G K + +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 250 VSVLCACAHLGAL-EKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVS 308
S++ AC G++ +G +H ++ +GL + + T+++ +Y G + + VF +
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 309 KRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADE 349
R +V+ W +++ G + G EE + ++K M+ G+ +E
Sbjct: 122 DR--NVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNE 160
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 225 bits (573), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 148/495 (29%), Positives = 258/495 (52%), Gaps = 25/495 (5%)
Query: 3 GVSPSFKIANLNQTLLSLLDGC---KSMLELKQLHAILITSGLSQDEPFISKVLCFSALS 59
G+ PS + + S+L C ++M++ K +HA + +GL + S
Sbjct: 99 GIPPS------SHAVTSVLRACGKMENMVDGKPIHAQALKNGLCG--CVYVQTGLVGLYS 150
Query: 60 NSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPF 119
G I+ + +AF ++ WN+++ GY S ++ +F K+ D +++
Sbjct: 151 RLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPE----KDAVSWNL 206
Query: 120 LAKASARLLNQETGVSVHAHI-IKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK 178
+ + A+ + S+ + + +K+ + N LI Y +C + A FD++ +K
Sbjct: 207 IISSYAKKGDMGNACSLFSAMPLKSPASW-----NILIGGYVNCREMKLARTYFDAMPQK 261
Query: 179 NLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKM- 237
N VSW +M+ GY K G++ A ++F MS++D + ++I Y + G+ ++A+ +F +M
Sbjct: 262 NGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQML 321
Query: 238 -RAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGA 296
R + +E+T+ SV+ A + LG G + YI ++G+ + +L TSL+D+Y K G
Sbjct: 322 ERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGD 381
Query: 297 IEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXX 356
+A +F ++K+ D + ++AMI G +G E+ LF M I + VT+
Sbjct: 382 FAKAFKMFSNLNKK--DTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLL 439
Query: 357 XXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTA 416
H GLV+E + F S+ + PS++HY MVD+L RAG+L AY+ I MPM+P A
Sbjct: 440 SAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNA 499
Query: 417 SMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAM 476
+ GALL H N E EI ++LE D G L+ +Y+ V RWDDAR +R+++
Sbjct: 500 GVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSI 559
Query: 477 ERRGVKKSPGFSSVE 491
+ + + K+ G S VE
Sbjct: 560 KEKKLCKTLGCSWVE 574
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 203/454 (44%), Gaps = 17/454 (3%)
Query: 13 LNQTLLSLLDGCKSMLELKQLHAILITSGLSQDEP-FISKVLCFSALSNSGDIDYSYRAF 71
L+ L L C + + KQ+HA L+ + + EP + + L F+ + + Y R
Sbjct: 2 LDSKLRFFLQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRIL 61
Query: 72 SQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQE 131
+ F W ++R S + +++ +++ M G+ P + +A ++ N
Sbjct: 62 KGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMV 121
Query: 132 TGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYA 191
G +HA +K G ++Q L+ +Y+ G I A K FD + EKN VSWNS+L GY
Sbjct: 122 DGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYL 181
Query: 192 KCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVS 251
+ GE+ A +VF+ + E+D SW+ +I Y K G+ A ++F M P + + ++
Sbjct: 182 ESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNI-LIG 240
Query: 252 VLCACAHLGALEKGKMMHKYIVDNGLPL-TLVLQTSLVDMYAKCGAIEEALLVFHGVSKR 310
C + K+ Y + +P V +++ Y K G ++ A +F +SK+
Sbjct: 241 GYVNCREM------KLARTYF--DAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKK 292
Query: 311 KTDVLIWNAMIGGLATHGSVEESLGLFKDM--QAVGIKADEVTYXXXXXXXXHGGLVKEA 368
D L+++AMI +G +++L LF M + I+ DE+T G
Sbjct: 293 --DKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFG 350
Query: 369 WHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGC-I 427
+ + G+ ++D+ + G A A++ + + T S A++ GC I
Sbjct: 351 TWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVS-YSAMIMGCGI 409
Query: 428 NHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYA 461
N E + + + P + + GL + Y+
Sbjct: 410 NGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYS 443
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 224 bits (572), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 138/458 (30%), Positives = 233/458 (50%), Gaps = 39/458 (8%)
Query: 31 KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQ---LSSPRIFIWNTIIR 87
KQLH ++ SGL + PF L SN G + Y+ F Q + + +WN+++
Sbjct: 258 KQLHCCVVKSGL-ESSPFAISAL-IDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLS 315
Query: 88 GYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEY 147
G+ ++ +L + L++ + L D T K +N G+ VH+ ++ +G+E
Sbjct: 316 GFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYEL 375
Query: 148 DRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMS 207
D + + L+ ++A+ GNI Q+ AHK+F +
Sbjct: 376 DYIVGSILVDLHANVGNI----------QD---------------------AHKLFHRLP 404
Query: 208 ERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKM 267
+D+ ++S LI G VK+G A +F ++ +G A++ + ++L C+ L +L GK
Sbjct: 405 NKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQ 464
Query: 268 MHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATH 327
+H + G V T+LVDMY KCG I+ +++F G+ +R DV+ W +I G +
Sbjct: 465 IHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLER--DVVSWTGIIVGFGQN 522
Query: 328 GSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESL-DKCGMTPSSEH 386
G VEE+ F M +GI+ ++VT+ H GL++EA E++ + G+ P EH
Sbjct: 523 GRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEH 582
Query: 387 YACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELE 446
Y C+VD+L +AG A + I +MP+EP ++ +LL+ C H+N L ++ KL++
Sbjct: 583 YYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGF 642
Query: 447 PDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKS 484
PD Y LSN YA + WD +REA ++ G K+S
Sbjct: 643 PDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLGAKES 680
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 197/426 (46%), Gaps = 14/426 (3%)
Query: 31 KQLHAILITSGLSQD----EPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTII 86
+ + A +I G+SQ+ IS + F LS++ ++ F ++S I W T++
Sbjct: 25 ESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDA------HKVFDEMSERNIVTWTTMV 78
Query: 87 RGYSNSKNPIQSLSIFLKML-RHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGH 145
GY++ P +++ ++ +ML A + Y + KA + + + G+ V+ I K
Sbjct: 79 SGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENL 138
Query: 146 EYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFES 205
D + NS++ MY G ++ A+ F + + SWN+++ GY K G M A +F
Sbjct: 139 RGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHR 198
Query: 206 MSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKG 265
M + +V SW+ LI G+V G R A+ +M+ G + + L AC+ G L G
Sbjct: 199 MPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMG 257
Query: 266 KMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVS-KRKTDVLIWNAMIGGL 324
K +H +V +GL + ++L+DMY+ CG++ A VFH + V +WN+M+ G
Sbjct: 258 KQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGF 317
Query: 325 ATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSS 384
+ E +L L + + D T + ++ + G
Sbjct: 318 LINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDY 377
Query: 385 EHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIE 444
+ +VD+ A G + A++ ++P + + G L+ GC+ LA + R+LI+
Sbjct: 378 IVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSG-LIRGCVKSGFNSLAFYLFRELIK 436
Query: 445 LEPDHD 450
L D D
Sbjct: 437 LGLDAD 442
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 140/316 (44%), Gaps = 38/316 (12%)
Query: 16 TLLSLLDGCKSMLELK---QLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
TL L C + + L+ Q+H++++ SG D +I + +N G+I +++ F
Sbjct: 344 TLSGALKICINYVNLRLGLQVHSLVVVSGYELD--YIVGSILVDLHANVGNIQDAHKLFH 401
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
+L + I ++ +IRG S + +F ++++ GL D + K + L +
Sbjct: 402 RLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGW 461
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G +H IK G+E + +L+ MY CG I +FD + E+++VSW ++ G+ +
Sbjct: 462 GKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQ 521
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
G + EA F KM +G + N+VT + +
Sbjct: 522 NGRV-------------------------------EEAFRYFHKMINIGIEPNKVTFLGL 550
Query: 253 LCACAHLGALEKGK-MMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRK 311
L AC H G LE+ + + + GL L +VD+ + G +EA + + + +
Sbjct: 551 LSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKM-PLE 609
Query: 312 TDVLIWNAMIGGLATH 327
D IW +++ TH
Sbjct: 610 PDKTIWTSLLTACGTH 625
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 143/307 (46%), Gaps = 15/307 (4%)
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G S+ AH+IK G + FI N++I MY + AHKVFD + E+N+V+W +M+ GY
Sbjct: 24 GESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTS 83
Query: 193 CGEMVLAHKVFESM--SERDVRS---WSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEV 247
G+ A +++ M SE + + +S+++ G+ + + V+E++ + + V
Sbjct: 84 DGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVV 143
Query: 248 TMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGV 307
M SV+ G L + K I+ P + T L+ Y K G ++EA+ +FH +
Sbjct: 144 LMNSVVDMYVKNGRLIEANSSFKEILR---PSSTSWNT-LISGYCKAGLMDEAVTLFHRM 199
Query: 308 SKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKE 367
+ +V+ WN +I G GS +L MQ G+ D GGL+
Sbjct: 200 P--QPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTM 256
Query: 368 AWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQ--MPMEPTASMLGALLSG 425
+ K G+ S + ++D+ + G L A Q + + + ++ ++LSG
Sbjct: 257 GKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSG 316
Query: 426 -CINHRN 431
IN N
Sbjct: 317 FLINEEN 323
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 147/476 (30%), Positives = 235/476 (49%), Gaps = 39/476 (8%)
Query: 16 TLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLS 75
+LLS+LD C ++ KQ+H + SGL D S + F+ S G ++ SY+ F +
Sbjct: 458 SLLSVLD-CLNLG--KQVHGYTLKSGLVLDLTVGSSL--FTLYSKCGSLEESYKLFQGIP 512
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVS 135
W ++I G++ +++ +F +ML G +PD T + + + G
Sbjct: 513 FKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKE 572
Query: 136 VHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGE 195
+H + ++ G + + ++L++MY+ KCG
Sbjct: 573 IHGYTLRAGIDKGMDLGSALVNMYS-------------------------------KCGS 601
Query: 196 MVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCA 255
+ LA +V++ + E D S SSLI GY + G ++ +F M G + + S+L A
Sbjct: 602 LKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKA 661
Query: 256 CAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVL 315
A G +H YI GL + +SL+ MY+K G+I++ F ++ D++
Sbjct: 662 AALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQING--PDLI 719
Query: 316 IWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESL 375
W A+I A HG E+L ++ M+ G K D+VT+ HGGLV+E++ S+
Sbjct: 720 AWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSM 779
Query: 376 DK-CGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFEL 434
K G+ P + HY CMVD L R+G+L A FI M ++P A + G LL+ C H EL
Sbjct: 780 VKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVEL 839
Query: 435 AEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSV 490
++ +K IELEP G YI LSN+ A V WD+ R+ M+ GV+K PG+SSV
Sbjct: 840 GKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 165/339 (48%), Gaps = 42/339 (12%)
Query: 14 NQTLLSLLDGC--KSML-ELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRA 70
N T+ S++ C SM+ E Q+HA + SG D + ++ S S SGDID S +
Sbjct: 351 NCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALI--SMYSKSGDIDLSEQV 408
Query: 71 FSQLSS-PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLN 129
F L R I N +I +S SK P +++ +F +ML+ GL D + L L
Sbjct: 409 FEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCL-- 466
Query: 130 QETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDG 189
G VH + +K+G D + +SL +Y+ CG++ ++K+F + K+ W SM+ G
Sbjct: 467 -NLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISG 525
Query: 190 YAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTM 249
+ + G + REA+ +F +M G +E T+
Sbjct: 526 FNEYGYL-------------------------------REAIGLFSEMLDDGTSPDESTL 554
Query: 250 VSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSK 309
+VL C+ +L +GK +H Y + G+ + L ++LV+MY+KCG+++ A V+ +
Sbjct: 555 AAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP- 613
Query: 310 RKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKAD 348
+ D + +++I G + HG +++ LF+DM G D
Sbjct: 614 -ELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMD 651
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 187/421 (44%), Gaps = 50/421 (11%)
Query: 16 TLLSLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
T S+L C S+ +L K + A +I G ++ F+ + + G + + FS
Sbjct: 253 TYSSVLAACASLEKLRFGKVVQARVIKCG--AEDVFVCTAI-VDLYAKCGHMAEAMEVFS 309
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
++ +P + W ++ GY+ S + +L IF +M G+ + T + A R
Sbjct: 310 RIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCE 369
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVF---DSVQEKNLVSWNSMLDG 189
VHA + K+G D + +LI MY+ G+I + +VF D +Q +N+V
Sbjct: 370 ASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-------- 421
Query: 190 YAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTM 249
+ +I + ++ + +A+ +F +M G + +E ++
Sbjct: 422 -------------------------NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSV 456
Query: 250 VSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSK 309
S+L L L GK +H Y + +GL L L + +SL +Y+KCG++EE+ +F G+
Sbjct: 457 CSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPF 513
Query: 310 RKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAW 369
+ D W +MI G +G + E++GLF +M G DE T +
Sbjct: 514 K--DNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGK 571
Query: 370 HFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMP-MEPTASMLGALLSGCIN 428
+ G+ + + +V++ ++ G L A Q ++P ++P + +L+SG
Sbjct: 572 EIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSC--SSLISGYSQ 629
Query: 429 H 429
H
Sbjct: 630 H 630
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 126/285 (44%), Gaps = 33/285 (11%)
Query: 67 SYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASAR 126
+Y+ F S ++ WNTII G ++N +F +M PD TY + A A
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACAS 263
Query: 127 LLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSM 186
L G V A +IK G E D F+ C IV
Sbjct: 264 LEKLRFGKVVQARVIKCGAE-DVFV----------CTAIV-------------------- 292
Query: 187 LDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANE 246
D YAKCG M A +VF + V SW+ ++ GY K+ + A+ +F++MR G + N
Sbjct: 293 -DLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINN 351
Query: 247 VTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHG 306
T+ SV+ AC + + +H ++ +G L + +L+ MY+K G I+ + VF
Sbjct: 352 CTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFED 411
Query: 307 VSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVT 351
+ + ++ N MI + +++ LF M G++ DE +
Sbjct: 412 LDDIQRQNIV-NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFS 455
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 156/375 (41%), Gaps = 35/375 (9%)
Query: 31 KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYS 90
K L A L+ L + F++K L S SNSG + + + F + P + N +I GY
Sbjct: 68 KILQAHLLRRYLLPFDVFLTKSL-LSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYK 126
Query: 91 NSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRF 150
+ +SL F KM G + ++Y + A + L V H IK G+ +
Sbjct: 127 QHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEV 186
Query: 151 IQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERD 210
++++LI +++ A+KVF N+ WN
Sbjct: 187 VESALIDVFSKNLRFEDAYKVFRDSLSANVYCWN-------------------------- 220
Query: 211 VRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHK 270
++I G ++ Y +F +M K + T SVL ACA L L GK++
Sbjct: 221 -----TIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQA 275
Query: 271 YIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSV 330
++ G V T++VD+YAKCG + EA+ VF + V+ W M+ G
Sbjct: 276 RVIKCGAEDVFVC-TAIVDLYAKCGHMAEAMEVFSRIP--NPSVVSWTVMLSGYTKSNDA 332
Query: 331 EESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACM 390
+L +FK+M+ G++ + T +V EA + K G S A +
Sbjct: 333 FSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAAL 392
Query: 391 VDVLARAGQLATAYQ 405
+ + +++G + + Q
Sbjct: 393 ISMYSKSGDIDLSEQ 407
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 122/256 (47%), Gaps = 14/256 (5%)
Query: 172 FDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAM 231
FD K+L+SW Y+ G M A K+F+++ + DV S + +I GY + + E++
Sbjct: 82 FDVFLTKSLLSW------YSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESL 135
Query: 232 AVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMY 291
F KM +G +ANE++ SV+ AC+ L A +++ + + G V++++L+D++
Sbjct: 136 RFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVF 195
Query: 292 AKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVT 351
+K E+A VF +V WN +I G + + LF +M K D T
Sbjct: 196 SKNLRFEDAYKVFR--DSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYT 253
Query: 352 YXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYAC--MVDVLARAGQLATAYQFICQ 409
Y ++ + KCG + + + C +VD+ A+ G +A A + +
Sbjct: 254 YSSVLAACASLEKLRFGKVVQARVIKCG---AEDVFVCTAIVDLYAKCGHMAEAMEVFSR 310
Query: 410 MPMEPTASMLGALLSG 425
+P P+ +LSG
Sbjct: 311 IP-NPSVVSWTVMLSG 325
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 164/569 (28%), Positives = 266/569 (46%), Gaps = 80/569 (14%)
Query: 16 TLLSLLDGCKSMLELK---QLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
T SLL C + +L+ Q H+I+I L+++ F+ L + G ++ + + F
Sbjct: 430 TFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKN-LFVGNAL-VDMYAKCGALEDARQIFE 487
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
++ WNTII Y +N ++ +F +M G+ D KA +
Sbjct: 488 RMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQ 547
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G VH +K G + D +SLI MY+ CG I A KVF S+ E ++VS N+++ GY++
Sbjct: 548 GKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ 607
Query: 193 CGEMVLAHKVFESMSERDVR----SWSSLID---------------------GYVKAGEY 227
+ A +F+ M R V +++++++ G+ GEY
Sbjct: 608 -NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEY 666
Query: 228 ---------------REAMAVF--------------------------------EKMRAV 240
EA A+F ++MR
Sbjct: 667 LGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHD 726
Query: 241 GPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEA 300
G ++ T V+VL C+ L +L +G+ +H I L + +L+DMYAKCG ++ +
Sbjct: 727 GVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGS 786
Query: 301 LLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXX 360
VF + +R+++V+ WN++I G A +G E++L +F M+ I DE+T+
Sbjct: 787 SQVFDEM-RRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACS 845
Query: 361 HGGLVKEAWHFFESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASML 419
H G V + FE + + G+ +H ACMVD+L R G L A FI ++P A +
Sbjct: 846 HAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLW 905
Query: 420 GALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERR 479
+LL C H + EI KLIELEP + Y+ LSN+YA W+ A +R+ M R
Sbjct: 906 SSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDR 965
Query: 480 GVKKSPGFSSVEICGVSRRFIAHDKTHSD 508
GVKK PG+S +++ + F A DK+HS+
Sbjct: 966 GVKKVPGYSWIDVEQRTHIFAAGDKSHSE 994
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 169/373 (45%), Gaps = 35/373 (9%)
Query: 71 FSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQ 130
F ++SSP + WN +I G+ ++ F M + + T + A + N
Sbjct: 284 FGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANL 343
Query: 131 ETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGY 190
+ G+ VHA IK G + ++ +SL+ MY+ C + A KVF++++EKN V WN+M+ GY
Sbjct: 344 DLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGY 403
Query: 191 AKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMV 250
A GE +HKV E +F M++ G ++ T
Sbjct: 404 AHNGE---SHKVME----------------------------LFMDMKSSGYNIDDFTFT 432
Query: 251 SVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR 310
S+L CA LE G H I+ L L + +LVDMYAKCGA+E+A +F + R
Sbjct: 433 SLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDR 492
Query: 311 KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWH 370
D + WN +IG + E+ LFK M GI +D H + +
Sbjct: 493 --DNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQ 550
Query: 371 FFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHR 430
KCG+ + ++D+ ++ G + A + +P SM AL++G +
Sbjct: 551 VHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSM-NALIAG-YSQN 608
Query: 431 NFELAEIVGRKLI 443
N E A ++ ++++
Sbjct: 609 NLEEAVVLFQEML 621
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 169/382 (44%), Gaps = 38/382 (9%)
Query: 64 IDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKA 123
+ Y+ + F L + WN+++ YS+ P + L F+ + + + P+ T+ +
Sbjct: 111 VSYAEKQFDFLEKD-VTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLST 169
Query: 124 SARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSW 183
AR N E G +H +IK G E + + +L+ MYA C I A +VF+ + + N V W
Sbjct: 170 CARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCW 229
Query: 184 NSMLDGYAKCG---EMVL--------------------------------AHKVFESMSE 208
+ GY K G E VL A +F MS
Sbjct: 230 TCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS 289
Query: 209 RDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMM 268
DV +W+ +I G+ K G A+ F MR K+ T+ SVL A + L+ G ++
Sbjct: 290 PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVV 349
Query: 269 HKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHG 328
H + GL + + +SLV MY+KC +E A VF + + K DV WNAMI G A +G
Sbjct: 350 HAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEAL-EEKNDVF-WNAMIRGYAHNG 407
Query: 329 SVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYA 388
+ + LF DM++ G D+ T+ ++ F + K + +
Sbjct: 408 ESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGN 467
Query: 389 CMVDVLARAGQLATAYQFICQM 410
+VD+ A+ G L A Q +M
Sbjct: 468 ALVDMYAKCGALEDARQIFERM 489
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 152/320 (47%), Gaps = 36/320 (11%)
Query: 33 LHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNS 92
+HA I GL+ + S ++ S S ++ + + F L WN +IRGY+++
Sbjct: 349 VHAEAIKLGLASNIYVGSSLV--SMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHN 406
Query: 93 KNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQ 152
+ + +F+ M G D T+ L A + E G H+ IIK
Sbjct: 407 GESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKK-------- 458
Query: 153 NSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVR 212
KNL N+++D YAKCG + A ++FE M +RD
Sbjct: 459 -----------------------LAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNV 495
Query: 213 SWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYI 272
+W+++I YV+ EA +F++M G ++ + S L AC H+ L +GK +H
Sbjct: 496 TWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLS 555
Query: 273 VDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEE 332
V GL L +SL+DMY+KCG I++A VF + + V+ NA+I G + ++EE
Sbjct: 556 VKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP--EWSVVSMNALIAGY-SQNNLEE 612
Query: 333 SLGLFKDMQAVGIKADEVTY 352
++ LF++M G+ E+T+
Sbjct: 613 AVVLFQEMLTRGVNPSEITF 632
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 159/332 (47%), Gaps = 45/332 (13%)
Query: 3 GVSPSFKIANLNQTLLSLLDGC---KSMLELKQLHAILITSGLSQDEPFISKVLCFSALS 59
GV+PS T ++++ C +S+ Q H + G S + ++ L
Sbjct: 624 GVNPS------EITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISL-LGMYM 676
Query: 60 NSGDIDYSYRAFSQLSSPR-IFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYP 118
NS + + FS+LSSP+ I +W ++ G+S + ++L + +M G+ PD T+
Sbjct: 677 NSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFV 736
Query: 119 FLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK 178
+ + + L + G ++H+ I H+ D N+LI MYA CG++ + +VFD ++ +
Sbjct: 737 TVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRR 796
Query: 179 -NLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKM 237
N+VSWNS+++GYAK +GY + +A+ +F+ M
Sbjct: 797 SNVVSWNSLINGYAK--------------------------NGYAE-----DALKIFDSM 825
Query: 238 RAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDN-GLPLTLVLQTSLVDMYAKCGA 296
R +E+T + VL AC+H G + G+ + + ++ G+ + +VD+ + G
Sbjct: 826 RQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGY 885
Query: 297 IEEALLVFHGVSKRKTDVLIWNAMIGGLATHG 328
++EA F K D +W++++G HG
Sbjct: 886 LQEA-DDFIEAQNLKPDARLWSSLLGACRIHG 916
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 141/301 (46%), Gaps = 13/301 (4%)
Query: 184 NSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPK 243
N+++D YAKC ++ A K F+ + E+DV +W+S++ Y G+ + + F +
Sbjct: 99 NAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIF 157
Query: 244 ANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLV 303
N+ T VL CA +E G+ +H ++ GL +LVDMYAKC I +A V
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRV 217
Query: 304 FHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGG 363
F + T + W + G G EE++ +F+ M+ G + D + + G
Sbjct: 218 FEWIVDPNT--VCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLG 275
Query: 364 LVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQM---PMEPTASMLG 420
+K+A F + +P + M+ + G A ++ M ++ T S LG
Sbjct: 276 KLKDARLLFGEMS----SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLG 331
Query: 421 ALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIG--LSNVYAGVKRWDDARGMREAMER 478
++LS N +L +V + I+L + Y+G L ++Y+ ++ + A + EA+E
Sbjct: 332 SVLSAIGIVANLDLGLVVHAEAIKLGLASN-IYVGSSLVSMYSKCEKMEAAAKVFEALEE 390
Query: 479 R 479
+
Sbjct: 391 K 391
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/508 (27%), Positives = 243/508 (47%), Gaps = 37/508 (7%)
Query: 11 ANLNQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRA 70
+++ TLL L +++ +Q+HA +I +GL + + ++ + G + + R
Sbjct: 184 SSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIV--NMYVKCGWLVGAKRV 241
Query: 71 FSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQ 130
F Q++ + ++ GY+ + +L +F+ ++ G+ D + + KA A L
Sbjct: 242 FDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEEL 301
Query: 131 ETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGY 190
G +HA + K G E + + L+ D Y
Sbjct: 302 NLGKQIHACVAKLGLESEVSVGTPLV-------------------------------DFY 330
Query: 191 AKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKA-NEVTM 249
KC A + F+ + E + SWS++I GY + ++ EA+ F+ +R+ N T
Sbjct: 331 IKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTY 390
Query: 250 VSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSK 309
S+ AC+ L G +H + L + +++L+ MY+KCG +++A VF S
Sbjct: 391 TSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFE--SM 448
Query: 310 RKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAW 369
D++ W A I G A +G+ E+L LF+ M + G+K + VT+ H GLV++
Sbjct: 449 DNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGK 508
Query: 370 HFFES-LDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCIN 428
H ++ L K + P+ +HY CM+D+ AR+G L A +F+ MP EP A LSGC
Sbjct: 509 HCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWT 568
Query: 429 HRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFS 488
H+N EL EI G +L +L+P+ Y+ N+Y +W++A M + M R +KK S
Sbjct: 569 HKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCS 628
Query: 489 SVEICGVSRRFIAHDKTHSDSEETYSML 516
++ G RFI DK H ++E Y L
Sbjct: 629 WIQEKGKIHRFIVGDKHHPQTQEIYEKL 656
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 114/261 (43%), Gaps = 3/261 (1%)
Query: 175 VQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVF 234
++ +++ N +L Y +C + A K+F+ MSE + S +++I Y + G +A+ +F
Sbjct: 113 IENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLF 172
Query: 235 EKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKC 294
M A G K ++L + + AL+ G+ +H +++ GL ++T +V+MY KC
Sbjct: 173 SGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKC 232
Query: 295 GAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXX 354
G + A VF ++ +K + ++ G G ++L LF D+ G++ D +
Sbjct: 233 GWLVGAKRVFDQMAVKKP--VACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSV 290
Query: 355 XXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEP 414
+ + K G+ +VD + +A + Q EP
Sbjct: 291 VLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAF-QEIREP 349
Query: 415 TASMLGALLSGCINHRNFELA 435
A++SG FE A
Sbjct: 350 NDVSWSAIISGYCQMSQFEEA 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 89/207 (42%), Gaps = 6/207 (2%)
Query: 223 KAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLV 282
K + EA ++M G + + + AC L +L G+++H + +++
Sbjct: 60 KHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVL 119
Query: 283 LQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQA 342
LQ ++ MY +C ++E+A +F +S + + + MI A G +++++GLF M A
Sbjct: 120 LQNCVLQMYCECRSLEDADKLFDEMS--ELNAVSRTTMISAYAEQGILDKAVGLFSGMLA 177
Query: 343 VGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLAT 402
G K Y + + + + G+ ++ +V++ + G L
Sbjct: 178 SGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVG 237
Query: 403 AYQFICQM----PMEPTASMLGALLSG 425
A + QM P+ T M+G +G
Sbjct: 238 AKRVFDQMAVKKPVACTGLMVGYTQAG 264
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 164/568 (28%), Positives = 259/568 (45%), Gaps = 81/568 (14%)
Query: 31 KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYS 90
+Q+H ++ GL D P++ L S S G + + FS + R+ IWN ++ Y+
Sbjct: 292 RQIHCDVVKMGLHND-PYVCTSL-LSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYA 349
Query: 91 NSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRF 150
+ +L +F M + + PD T + + L G SVHA + K +
Sbjct: 350 ENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTST 409
Query: 151 IQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERD 210
I+++L+ +Y+ CG A+ VF S++EK++V+W S++ G K G+ A KVF M + D
Sbjct: 410 IESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDD 469
Query: 211 -----------------------------------------VRSWSSLIDGYVKAGEYRE 229
V SSLID Y K G
Sbjct: 470 DSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEM 529
Query: 230 AMAVFEKMR-------------------------------AVGPKANEVTMVSVLCACAH 258
A+ VF M + G + V++ SVL A +
Sbjct: 530 ALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISS 589
Query: 259 LGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWN 318
+L KGK +H Y + G+P L+ +L+DMY KCG + A +F + + ++ WN
Sbjct: 590 TASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKS--LITWN 647
Query: 319 AMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDK- 377
MI G +HG +L LF +M+ G D+VT+ H G V+E + FE + +
Sbjct: 648 LMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQD 707
Query: 378 CGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEI 437
G+ P+ EHYA MVD+L RAG L AY FI MP+E +S+ LLS H N EL +
Sbjct: 708 YGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGIL 767
Query: 438 VGRKLIELEPDHDGRYIGLSNVY--AGVKRWDDARGMREAMERRGVKKSPGFSSVEICGV 495
KL+ +EP+ Y+ L N+Y AG+K ++A + M+ +G+ K PG S +E+
Sbjct: 768 SAEKLLRMEPERGSTYVQLINLYMEAGLK--NEAAKLLGLMKEKGLHKQPGCSWIEVSDR 825
Query: 496 SRRFIAHDKTHSDSEETYSMLNFVAYQM 523
+ F + + E +++LN + M
Sbjct: 826 TNVFFSGGSSSPMKAEIFNVLNRLKSNM 853
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 152/336 (45%), Gaps = 54/336 (16%)
Query: 83 NTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDY---LTYPFLAKASARLLNQETGVSVHAH 139
N+ IR +Q+L ++ K G +P + T+P L KA + L N G ++H
Sbjct: 28 NSGIRALIQKGEYLQALHLYSK--HDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 140 IIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLA 199
++ G YD FI SL++MY CG + +A +VFD W+ G
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG--------WSQSQSG---------- 127
Query: 200 HKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTM---VSVLCAC 256
+S RDV W+S+IDGY K ++E + F +M G + + ++ VSV+C
Sbjct: 128 ------VSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 257 AHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLI 316
+ E+GK +H +++ N L L+T+L+DMY K G +A VF + + K++V++
Sbjct: 182 GNF-RREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEI-EDKSNVVL 239
Query: 317 WNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXX-----------XXHGGLV 365
WN MI G G E SL L+ + +K ++ H +V
Sbjct: 240 WNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVV 299
Query: 366 KEAWH--------FFESLDKCGMTPSSEH-YACMVD 392
K H KCGM +E ++C+VD
Sbjct: 300 KMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVD 335
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 167/357 (46%), Gaps = 41/357 (11%)
Query: 17 LLSLLDGCKSMLELK---QLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQ 73
+ S+ + C + L+ Q+H +I +GL + F+ L S G + + + F+
Sbjct: 479 MTSVTNACAGLEALRFGLQVHGSMIKTGLVLN-VFVGSSL-IDLYSKCGLPEMALKVFTS 536
Query: 74 LSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETG 133
+S+ + WN++I YS + P S+ +F ML G+ PD ++ + A + + G
Sbjct: 537 MSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKG 596
Query: 134 VSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKC 193
S+H + ++ G D ++N+LI MY CG +A +F +Q K+L++WN M+ GY
Sbjct: 597 KSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSH 656
Query: 194 GEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVL 253
G+ + A+++F++M+ G ++VT +S++
Sbjct: 657 GDCI-------------------------------TALSLFDEMKKAGESPDDVTFLSLI 685
Query: 254 CACAHLGALEKGKMMHKYI-VDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT 312
AC H G +E+GK + +++ D G+ + ++VD+ + G +EEA F +
Sbjct: 686 SACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEA-YSFIKAMPIEA 744
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADE-VTYXXXXXXXXHGGLVKEA 368
D IW ++ TH +VE LG+ + + ++ + TY GL EA
Sbjct: 745 DSSIWLCLLSASRTHHNVE--LGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEA 799
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 121/471 (25%), Positives = 201/471 (42%), Gaps = 64/471 (13%)
Query: 16 TLLSLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAF- 71
T SLL C ++ L K +H ++ G D PFI+ L + G +DY+ + F
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYD-PFIATSL-VNMYVKCGFLDYAVQVFD 119
Query: 72 ------SQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASA 125
S +S+ + +WN++I GY + + + F +ML G+ PD + +
Sbjct: 120 GWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMC 179
Query: 126 RLLN--QETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK-NLVS 182
+ N +E G +H +++ + D F++ +LI MY G + A +VF +++K N+V
Sbjct: 180 KEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVL 239
Query: 183 WNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGP 242
WN M+ G+ G + ES +D Y+ A
Sbjct: 240 WNVMIVGFGGSG-------ICESS-----------LDLYMLA------------------ 263
Query: 243 KANEVTMVSV-----LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAI 297
K N V +VS L AC+ G+ +H +V GL + TSL+ MY+KCG +
Sbjct: 264 KNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMV 323
Query: 298 EEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXX 357
EA VF V ++ + IWNAM+ A + +L LF M+ + D T
Sbjct: 324 GEAETVFSCVVDKRLE--IWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVIS 381
Query: 358 XXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTAS 417
GL L K + +S + ++ + ++ G AY M E
Sbjct: 382 CCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSME-EKDMV 440
Query: 418 MLGALLSG-CINHRNFELAEIVGRKLIE---LEPDHDGRYIGLSNVYAGVK 464
G+L+SG C N + E ++ G + L+PD D ++N AG++
Sbjct: 441 AWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSD-IMTSVTNACAGLE 490
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 75/142 (52%), Gaps = 6/142 (4%)
Query: 213 SWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEV-TMVSVLCACAHLGALEKGKMMHKY 271
S +S I ++ GEY +A+ ++ K P V T S+L AC+ L L GK +H
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 272 IVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT-----DVLIWNAMIGGLAT 326
+V G + TSLV+MY KCG ++ A+ VF G S+ ++ DV +WN+MI G
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 327 HGSVEESLGLFKDMQAVGIKAD 348
+E +G F+ M G++ D
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPD 167
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 221/449 (49%), Gaps = 34/449 (7%)
Query: 71 FSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQ 130
F +S + W ++I Y ++++ F+KM + P+ T+ + A A L
Sbjct: 267 FENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRL 326
Query: 131 ETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGY 190
G +H +++ G + NS++ MY++
Sbjct: 327 VWGEQLHCNVLSLGLNDSLSVSNSMMKMYST----------------------------- 357
Query: 191 AKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMV 250
CG +V A +F+ M RD+ SWS++I GY +AG E F MR G K + +
Sbjct: 358 --CGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALA 415
Query: 251 SVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR 310
S+L ++ +E G+ +H + GL +++SL++MY+KCG+I+EA ++F G + R
Sbjct: 416 SLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIF-GETDR 474
Query: 311 KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWH 370
D++ AMI G A HG +E++ LF+ VG + D VT+ H G + +H
Sbjct: 475 D-DIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFH 533
Query: 371 FFESLDKC-GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINH 429
+F + + M P+ EHY CMVD+L RAG+L+ A + I +M + + LL C
Sbjct: 534 YFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAK 593
Query: 430 RNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSS 489
+ E +++EL+P + L+N+Y+ ++A +R+ M+ +GV K PG+SS
Sbjct: 594 GDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSS 653
Query: 490 VEICGVSRRFIAHDKTHSDSEETYSMLNF 518
++I F++ D+ H SE+ Y++L
Sbjct: 654 IKIKDCVSAFVSGDRFHPQSEDIYNILEL 682
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 172/390 (44%), Gaps = 38/390 (9%)
Query: 62 GDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLA 121
G ID S R FS++ W II G ++ + L+ F +M R D T+
Sbjct: 157 GKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIAL 216
Query: 122 KASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLV 181
KA A L + G ++H H+I G + NSL MY
Sbjct: 217 KACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYT--------------------- 255
Query: 182 SWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVG 241
+CGEM +FE+MSERDV SW+SLI Y + G+ +A+ F KMR
Sbjct: 256 ----------ECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQ 305
Query: 242 PKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEAL 301
NE T S+ ACA L L G+ +H ++ GL +L + S++ MY+ CG + A
Sbjct: 306 VPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSAS 365
Query: 302 LVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXH 361
++F G+ R D++ W+ +IGG G EE F M+ G K + +
Sbjct: 366 VLFQGMRCR--DIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGN 423
Query: 362 GGLVKEAWHFFESLDKC-GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLG 420
++ E +L C G+ +S + ++++ ++ G + A + + S L
Sbjct: 424 MAVI-EGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVS-LT 481
Query: 421 ALLSGCINH-RNFELAEIVGRKL-IELEPD 448
A+++G H ++ E ++ + L + PD
Sbjct: 482 AMINGYAEHGKSKEAIDLFEKSLKVGFRPD 511
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 142/298 (47%), Gaps = 35/298 (11%)
Query: 57 ALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIF--LKMLRHGLAPDY 114
+L N+G++ + + F ++ I W +II+ Y + N ++L +F ++++ H ++PD
Sbjct: 49 SLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDT 108
Query: 115 LTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDS 174
+ KA + N G S+HA+ +KT ++ +SL
Sbjct: 109 SVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSL------------------- 149
Query: 175 VQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVF 234
LD Y + G++ + +VF M R+ +W+++I G V AG Y+E + F
Sbjct: 150 ------------LDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYF 197
Query: 235 EKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKC 294
+M ++ T L ACA L ++ GK +H +++ G TL + SL MY +C
Sbjct: 198 SEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTEC 257
Query: 295 GAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
G +++ L +F +S+R DV+ W ++I G +++ F M+ + +E T+
Sbjct: 258 GEMQDGLCLFENMSER--DVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTF 313
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 144/327 (44%), Gaps = 48/327 (14%)
Query: 15 QTLLSLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAF 71
QT S+ C S+ L +QLH +++ GL+ D +S + S G++ + F
Sbjct: 311 QTFASMFSACASLSRLVWGEQLHCNVLSLGLN-DSLSVSNSM-MKMYSTCGNLVSASVLF 368
Query: 72 SQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQE 131
+ I W+TII GY + + F M + G P L S + E
Sbjct: 369 QGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIE 428
Query: 132 TGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYA 191
G VHA + G E + +++SLI+MY+ CG+I A +F ++VS +M++GYA
Sbjct: 429 GGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYA 488
Query: 192 KCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVS 251
+ G+ +EA+ +FEK VG + + VT +S
Sbjct: 489 -------------------------------EHGKSKEAIDLFEKSLKVGFRPDSVTFIS 517
Query: 252 VLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTS------LVDMYAKCGAIEEALLVFH 305
VL AC H G L+ G H + N + T ++ + +VD+ + G + +A + +
Sbjct: 518 VLTACTHSGQLDLG--FHYF---NMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMIN 572
Query: 306 GVSKRKTDVLIWNAMIGGLATHGSVEE 332
+S +K DV +W ++ G +E
Sbjct: 573 EMSWKKDDV-VWTTLLIACKAKGDIER 598
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 87/173 (50%), Gaps = 8/173 (4%)
Query: 184 NSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMR----A 239
NS L G + A +VF+ M D+ SW+S+I YV A EA+ +F MR A
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 240 VGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEE 299
V P + +++ VL AC + G+ +H Y V L ++ + +SL+DMY + G I++
Sbjct: 104 VSPDTSVLSV--VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDK 161
Query: 300 ALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
+ VF + R + + W A+I GL G +E L F +M +D T+
Sbjct: 162 SCRVFSEMPFR--NAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTF 212
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 132/444 (29%), Positives = 218/444 (49%), Gaps = 37/444 (8%)
Query: 50 SKVLCFSALS---NSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKML 106
++V C S L SGD++ R FS + P + WN ++ GYSN ++ +++S F +M
Sbjct: 349 NEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQ 408
Query: 107 RHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIV 166
L PD T + + ARL E G +H +I+T + I + LI +Y+ C +
Sbjct: 409 FQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKME 468
Query: 167 WAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGE 226
+ +FD + ++E D+ W+S+I G+
Sbjct: 469 ISECIFD------------------------------DCINELDIACWNSMISGFRHNML 498
Query: 227 YREAMAVFEKMRAVGPKA-NEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQT 285
+A+ +F +M NE + +VL +C+ L +L G+ H +V +G ++T
Sbjct: 499 DTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVET 558
Query: 286 SLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGI 345
+L DMY KCG I+ A F V ++ T +IWN MI G +G +E++GL++ M + G
Sbjct: 559 ALTDMYCKCGEIDSARQFFDAVLRKNT--VIWNEMIHGYGHNGRGDEAVGLYRKMISSGE 616
Query: 346 KADEVTYXXXXXXXXHGGLVKEAWHFFESLDKC-GMTPSSEHYACMVDVLARAGQLATAY 404
K D +T+ H GLV+ S+ + G+ P +HY C+VD L RAG+L A
Sbjct: 617 KPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAE 676
Query: 405 QFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVK 464
+ P + ++ + LLS C H + LA V KL+ L+P Y+ LSN Y+ ++
Sbjct: 677 KLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLR 736
Query: 465 RWDDARGMREAMERRGVKKSPGFS 488
+WDD+ ++ M + V K+PG S
Sbjct: 737 QWDDSAALQGLMNKNRVHKTPGQS 760
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 124/220 (56%), Gaps = 3/220 (1%)
Query: 132 TGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYA 191
+G +H I++ G + D ++ N L+ +Y CG+ +A KVFD + +++ SWN+ L
Sbjct: 24 SGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRC 83
Query: 192 KCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVS 251
K G++ A +VF+ M ERDV SW+++I V+ G +A+ V+++M G + T+ S
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 252 VLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAI-EEALLVFHGVSKR 310
VL AC+ + G H V GL + + +L+ MYAKCG I + + VF +S
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLS-- 201
Query: 311 KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEV 350
+ + + + A+IGGLA V E++ +F+ M G++ D V
Sbjct: 202 QPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSV 241
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/441 (22%), Positives = 187/441 (42%), Gaps = 52/441 (11%)
Query: 16 TLLSLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSALSNSGDI-DYSYRAF 71
TL S+L C +L+ + H + + +GL ++ F+ L S + G I DY R F
Sbjct: 140 TLASVLSACSKVLDGVFGMRCHGVAVKTGLDKN-IFVGNAL-LSMYAKCGFIVDYGVRVF 197
Query: 72 SQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASA------ 125
LS P + +I G + ++++ +F M G+ D + + SA
Sbjct: 198 ESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCD 257
Query: 126 ---RLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVS 182
+ E G +H ++ G D + NSL+ +YA ++ A +F + E N+VS
Sbjct: 258 SLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVS 317
Query: 183 WNSMLDGYA-----------------------------------KCGEMVLAHKVFESMS 207
WN M+ G+ + G++ ++F S+
Sbjct: 318 WNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP 377
Query: 208 ERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKM 267
+ V +W++++ GY Y EA++ F +M+ K ++ T+ +L +CA L LE GK
Sbjct: 378 QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQ 437
Query: 268 MHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATH 327
+H ++ + + + L+ +Y++C +E + +F + D+ WN+MI G +
Sbjct: 438 IHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCIN-ELDIACWNSMISGFRHN 496
Query: 328 GSVEESLGLFKDM-QAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEH 386
++L LF+ M Q + +E ++ + F + K G S
Sbjct: 497 MLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFV 556
Query: 387 YACMVDVLARAGQLATAYQFI 407
+ D+ + G++ +A QF
Sbjct: 557 ETALTDMYCKCGEIDSARQFF 577
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 113/493 (22%), Positives = 205/493 (41%), Gaps = 73/493 (14%)
Query: 14 NQTLLSLL-----DGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSY 68
N+ L SLL + CK L K +H ++ G+ D +++L GD DY+
Sbjct: 6 NKYLASLLRCYRDERCK--LSGKVIHGFIVRMGMKSDTYLCNRLL--DLYIECGDGDYAR 61
Query: 69 RAFSQLSSPRIFIWNTII---------------------RGYSNSKNPI----------Q 97
+ F ++S ++ WN + R + N I +
Sbjct: 62 KVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEK 121
Query: 98 SLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIH 157
+L ++ +M+ G P T + A +++L+ G+ H +KTG + + F+ N+L+
Sbjct: 122 ALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLS 181
Query: 158 MYASCGNIV-WAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSS 216
MYA CG IV + +VF+S+ + N VS+ +++ G A+ +++ A ++F M E+ V+ S
Sbjct: 182 MYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSV 241
Query: 217 LIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNG 276
+ + RE ++ NE+ GK +H + G
Sbjct: 242 CLSNILSISAPREGCDSLSEI-----YGNEL-----------------GKQIHCLALRLG 279
Query: 277 LPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGL 336
L L SL+++YAK + A L+F + + +V+ WN MI G ++S+
Sbjct: 280 FGGDLHLNNSLLEIYAKNKDMNGAELIFAEMP--EVNVVSWNIMIVGFGQEYRSDKSVEF 337
Query: 337 FKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLAR 396
M+ G + +EVT G V+ F S+ + PS + M+ +
Sbjct: 338 LTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ----PSVSAWNAMLSGYSN 393
Query: 397 AGQLATAYQFICQMP---MEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRY 453
A QM ++P + L +LS C R E + + +I E +
Sbjct: 394 YEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHI 453
Query: 454 I-GLSNVYAGVKR 465
+ GL VY+ ++
Sbjct: 454 VSGLIAVYSECEK 466
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 138/487 (28%), Positives = 243/487 (49%), Gaps = 35/487 (7%)
Query: 41 GLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLS 100
G + + ++S + + +GD+ + + F ++ ++ WN +I G + + LS
Sbjct: 18 GRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLS 77
Query: 101 IFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYA 160
+F +M G +PD T + SA L + G +H + IK G E D + +SL HMY
Sbjct: 78 LFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMY- 136
Query: 161 SCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDG 220
M +G + GE+V+ SM R++ +W++LI G
Sbjct: 137 -------------------------MRNGKLQDGEIVI-----RSMPVRNLVAWNTLIMG 166
Query: 221 YVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLT 280
+ G + +++ M+ G + N++T V+VL +C+ L +G+ +H + G
Sbjct: 167 NAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSV 226
Query: 281 LVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDM 340
+ + +SL+ MY+KCG + +A F + D ++W++MI HG +E++ LF M
Sbjct: 227 VAVVSSLISMYSKCGCLGDAAKAFS--EREDEDEVMWSSMISAYGFHGQGDEAIELFNTM 284
Query: 341 -QAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESL-DKCGMTPSSEHYACMVDVLARAG 398
+ ++ +EV + H GL + F+ + +K G P +HY C+VD+L RAG
Sbjct: 285 AEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAG 344
Query: 399 QLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSN 458
L A I MP++ + LLS C H+N E+A+ V +++++++P+ Y+ L+N
Sbjct: 345 CLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLAN 404
Query: 459 VYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNF 518
V+A KRW D +R++M + VKK G S E G +F D++ S S+E YS L
Sbjct: 405 VHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKE 464
Query: 519 VAYQMKL 525
+ +MKL
Sbjct: 465 LTLEMKL 471
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 144/482 (29%), Positives = 251/482 (52%), Gaps = 14/482 (2%)
Query: 16 TLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLS 75
T+ S+L GC + QLH + + SG E ++ L S S G+ + R F ++
Sbjct: 134 TVASVLGGCGDIEGGMQLHCLAMKSGFEM-EVYVGTSL-VSMYSRCGEWVLAARMFEKVP 191
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSL--SIFLKMLRHGLA-PDYLTYPFLAKASARLLNQET 132
+ +N I G +N + +L S+F M + P+ +T+ A A LLN +
Sbjct: 192 HKSVVTYNAFISGLM--ENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQY 249
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQE-KNLVSWNSMLDGYA 191
G +H ++K +++ + +LI MY+ C A+ VF +++ +NL+SWNS++ G
Sbjct: 250 GRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMM 309
Query: 192 KCGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEV 247
G+ A ++FE + D +W+SLI G+ + G+ EA FE+M +V +
Sbjct: 310 INGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLK 369
Query: 248 TMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGV 307
+ S+L AC+ + L+ GK +H +++ + + TSL+DMY KCG A +F
Sbjct: 370 CLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRF 429
Query: 308 SKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKE 367
+ D + WN MI G HG E ++ +F+ ++ ++ T+ H G V++
Sbjct: 430 EPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEK 489
Query: 368 AWHFFESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGC 426
F + ++ G PS+EH CM+D+L R+G+L A + I QM EP++S+ +LL C
Sbjct: 490 GSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM-SEPSSSVYSSLLGSC 548
Query: 427 INHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPG 486
H + L E KL ELEP++ ++ LS++YA ++RW+D +R+ ++++ + K PG
Sbjct: 549 RQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPG 608
Query: 487 FS 488
S
Sbjct: 609 LS 610
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 103/231 (44%), Gaps = 36/231 (15%)
Query: 111 APDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHK 170
+P+ T+P L K+ A+L + G +HA ++KTG D F +L+ MY + A K
Sbjct: 28 SPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALK 87
Query: 171 VFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREA 230
V D M ER + S ++ + G ++ G R+A
Sbjct: 88 VLDE-------------------------------MPERGIASVNAAVSGLLENGFCRDA 116
Query: 231 MAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDM 290
+F R G N VT+ SVL C G +E G +H + +G + + + TSLV M
Sbjct: 117 FRMFGDARVSGSGMNSVTVASVLGGC---GDIEGGMQLHCLAMKSGFEMEVYVGTSLVSM 173
Query: 291 YAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQ 341
Y++CG A +F V + V+ +NA I GL +G + +F M+
Sbjct: 174 YSRCGEWVLAARMFEKVPHK--SVVTYNAFISGLMENGVMNLVPSVFNLMR 222
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/325 (35%), Positives = 177/325 (54%), Gaps = 3/325 (0%)
Query: 190 YAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTM 249
YA G++ A +F S+ RD+ W+++I GYV+ G +E + ++ MR ++ T
Sbjct: 153 YALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTF 212
Query: 250 VSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSK 309
SV AC+ L LE GK H ++ + +++ ++LVDMY KC + + VF +S
Sbjct: 213 ASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLST 272
Query: 310 RKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAW 369
R +V+ W ++I G HG V E L F+ M+ G + + VT+ HGGLV + W
Sbjct: 273 R--NVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGW 330
Query: 370 -HFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCIN 428
HF+ G+ P +HYA MVD L RAG+L AY+F+ + P + + G+LL C
Sbjct: 331 EHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRI 390
Query: 429 HRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFS 488
H N +L E+ K +EL+P + G Y+ +N YA + A +R ME GVKK PG+S
Sbjct: 391 HGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYS 450
Query: 489 SVEICGVSRRFIAHDKTHSDSEETY 513
+E+ G RF+ D +H SE+ Y
Sbjct: 451 QIELQGEVHRFMKDDTSHRLSEKIY 475
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 141/321 (43%), Gaps = 38/321 (11%)
Query: 15 QTLLSLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAF 71
+T LL CK E K++HA + G + +E K+L ALS GD+ + F
Sbjct: 109 ETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALS--GDLQTAGILF 166
Query: 72 SQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQE 131
L + WN +I GY + L I+ M ++ + PD T+ + +A + L E
Sbjct: 167 RSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLE 226
Query: 132 TGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYA 191
G HA +IK + + + ++L+ MY C + H+VFD + +N+++W S++ GY
Sbjct: 227 HGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYG 286
Query: 192 KCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVS 251
G++ K FE M E G + N VT +
Sbjct: 287 YHGKVSEVLKCFEKMKEE-------------------------------GCRPNPVTFLV 315
Query: 252 VLCACAHLGALEKG-KMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR 310
VL AC H G ++KG + + D G+ ++VD + G ++EA F S
Sbjct: 316 VLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEA-YEFVMKSPC 374
Query: 311 KTDVLIWNAMIGGLATHGSVE 331
K +W +++G HG+V+
Sbjct: 375 KEHPPVWGSLLGACRIHGNVK 395
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 5/150 (3%)
Query: 203 FESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGAL 262
F+ ++R + G G +EA+ + + + G + T +L C
Sbjct: 68 FQVENQRKTEKLDKTLKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEY 124
Query: 263 EKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIG 322
KGK +H + G L L+ L+ +YA G ++ A ++F + R D++ WNAMI
Sbjct: 125 TKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIR--DLIPWNAMIS 182
Query: 323 GLATHGSVEESLGLFKDMQAVGIKADEVTY 352
G G +E L ++ DM+ I D+ T+
Sbjct: 183 GYVQKGLEQEGLFIYYDMRQNRIVPDQYTF 212
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 154/577 (26%), Positives = 255/577 (44%), Gaps = 113/577 (19%)
Query: 16 TLLSLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLC-FSALSNSGDIDYSYRAF 71
TL S+L C S++ L +Q+H I +G D ++ +L ++ + +Y +
Sbjct: 127 TLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETM 186
Query: 72 SQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQE 131
W +++ GYS + +++ F + R G + T+P + A A +
Sbjct: 187 E--GEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACR 244
Query: 132 TGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYA 191
GV VH I+K+G + + ++Q++LI MYA C + A + + ++ ++VSWNSM+ G
Sbjct: 245 VGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCV 304
Query: 192 KCGEMVLAHKVFESMSERDVR--------------------------------------- 212
+ G + A +F M ERD++
Sbjct: 305 RQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYK 364
Query: 213 -SWSSLIDGYVKAGEYREAMAVFE-------------------------------KMRAV 240
++L+D Y K G A+ VFE MR
Sbjct: 365 LVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVG 424
Query: 241 GPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEA 300
G +++ SVL A A L LE G+ +H + +G P +L + SLV MY KCG++E+A
Sbjct: 425 GITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDA 484
Query: 301 LLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXX 360
++F+ + R D++ W +I G A +G +E++ F M+ V
Sbjct: 485 NVIFNSMEIR--DLITWTCLIVGYAKNGLLEDAQRYFDSMRTV----------------- 525
Query: 361 HGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLG 420
G+TP EHYACM+D+ R+G Q + QM +EP A++
Sbjct: 526 -----------------YGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWK 568
Query: 421 ALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRG 480
A+L+ H N E E + L+ELEP++ Y+ LSN+Y+ R D+A +R M+ R
Sbjct: 569 AILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRN 628
Query: 481 VKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLN 517
+ K PG S VE G F++ D+ H E YS ++
Sbjct: 629 ISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVD 665
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 141/296 (47%), Gaps = 34/296 (11%)
Query: 57 ALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLT 116
A SNS + + + F WN +I GY S + +++ ++F +M G+ P+ T
Sbjct: 68 AYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYT 127
Query: 117 YPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQ 176
+ + L+ G +H H IKTG + D + N L+ MYA C I A +F++++
Sbjct: 128 LGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETME 187
Query: 177 -EKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFE 235
EKN V+W SML GY++ G A K E F
Sbjct: 188 GEKNNVTWTSMLTGYSQNG---FAFKAIE----------------------------CFR 216
Query: 236 KMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCG 295
+R G ++N+ T SVL ACA + A G +H IV +G + +Q++L+DMYAKC
Sbjct: 217 DLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCR 276
Query: 296 AIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVT 351
+E A + G+ DV+ WN+MI G G + E+L +F M +K D+ T
Sbjct: 277 EMESARALLEGM--EVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFT 330
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 150/304 (49%), Gaps = 7/304 (2%)
Query: 126 RLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNS 185
RL + G +H++ +T + N L+ + G + A ++FD + E++ +WN+
Sbjct: 10 RLPLKPFGSCIHSYADRT-----KLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNT 64
Query: 186 MLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKAN 245
M+ Y+ + A K+F S ++ SW++LI GY K+G EA +F +M++ G K N
Sbjct: 65 MIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPN 124
Query: 246 EVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFH 305
E T+ SVL C L L +G+ +H + + G L + + L+ MYA+C I EA +F
Sbjct: 125 EYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFE 184
Query: 306 GVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLV 365
+ K +V W +M+ G + +G +++ F+D++ G ++++ T+
Sbjct: 185 TMEGEKNNV-TWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSAC 243
Query: 366 KEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSG 425
+ + K G + + ++D+ A+ ++ +A + M ++ S +++ G
Sbjct: 244 RVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVS-WNSMIVG 302
Query: 426 CINH 429
C+
Sbjct: 303 CVRQ 306
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 155/588 (26%), Positives = 271/588 (46%), Gaps = 87/588 (14%)
Query: 16 TLLSLLDGCKSMLELKQLHAILITSGLSQD----EPFISKVLCFSALSNSGDIDYSYRAF 71
T LS G + L QL + ++ +GL D FI+ S SG + R F
Sbjct: 179 TALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFIT------MYSRSGSFRGARRVF 232
Query: 72 SQLSSPRIFIWNTIIRGYSNSKN-PIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQ 130
++S + WN+++ G S +++ IF M+R G+ D++++ + +
Sbjct: 233 DEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDL 292
Query: 131 ETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSML--- 187
+ +H IK G+E + N L+ Y+ CG + VF + E+N+VSW +M+
Sbjct: 293 KLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSN 352
Query: 188 -------------DGY-------------AKCGE-------------------------- 195
DG KC E
Sbjct: 353 KDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNS 412
Query: 196 MVLAHKVFESMSE----------RDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKAN 245
+ + FE++ + R++ SW+++I G+ + G EA+ +F A N
Sbjct: 413 FITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSA-AAETMPN 471
Query: 246 EVTMVSVLCACAHLG--ALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLV 303
E T SVL A A ++++G+ H +++ GL V+ ++L+DMYAK G I+E+ V
Sbjct: 472 EYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKV 531
Query: 304 FHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGG 363
F+ +S++ + +W ++I ++HG E + LF M + D VT+ G
Sbjct: 532 FNEMSQK--NQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKG 589
Query: 364 LVKEAWHFFESLDKC-GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGAL 422
+V + + F + + + PS EHY+CMVD+L RAG+L A + + ++P P SML ++
Sbjct: 590 MVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSM 649
Query: 423 LSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVK 482
L C H N ++ V +E++P+ G Y+ + N+YA + WD A +R+AM ++ V
Sbjct: 650 LGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVS 709
Query: 483 KSPGFSSVEICGVS-----RRFIAHDKTHSDSEETYSMLNFVAYQMKL 525
K GFS +++ + F + DK+H S+E Y M+ + +M L
Sbjct: 710 KEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMNL 757
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 154/343 (44%), Gaps = 53/343 (15%)
Query: 16 TLLSLLDGCKSMLELK-QLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQL 74
TL L C+ L+ Q+H TSG + + V+ +G D + F L
Sbjct: 80 TLCLALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVM--GMYRKAGRFDNALCIFENL 137
Query: 75 SSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYP----FLAKASARLLNQ 130
P + WNTI+ G+ + N I +L+ ++M G+ D TY F + LL
Sbjct: 138 VDPDVVSWNTILSGFDD--NQI-ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLL-- 192
Query: 131 ETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGY 190
G+ + + ++KTG E D + NS I M Y
Sbjct: 193 --GLQLQSTVVKTGLESDLVVGNSFITM-------------------------------Y 219
Query: 191 AKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYR-EAMAVFEKMRAVGPKANEVTM 249
++ G A +VF+ MS +D+ SW+SL+ G + G + EA+ +F M G + + V+
Sbjct: 220 SRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSF 279
Query: 250 VSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSK 309
SV+ C H L+ + +H + G L + L+ Y+KCG +E VFH +S+
Sbjct: 280 TSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSE 339
Query: 310 RKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
R +V+ W MI + ++++ +F +M+ G+ +EVT+
Sbjct: 340 R--NVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTF 375
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 14/217 (6%)
Query: 184 NSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPK 243
N+++ Y K G A +FE++ + DV SW++++ G+ + + A+ +M++ G
Sbjct: 115 NAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGF---DDNQIALNFVVRMKSAGVV 171
Query: 244 ANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLV 303
+ T + L C G + +V GL LV+ S + MY++ G+ A V
Sbjct: 172 FDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRV 231
Query: 304 FHGVSKRKTDVLIWNAMIGGLATHGSVE-ESLGLFKDMQAVGIKADEVTYXXXXXXXXHG 362
F +S + D++ WN+++ GL+ G+ E++ +F+DM G++ D V++ H
Sbjct: 232 FDEMSFK--DMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHE 289
Query: 363 GLVKEAWHF--------FESLDKCGMTPSSEHYACMV 391
+K A +ESL + G S + C V
Sbjct: 290 TDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGV 326
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 78/159 (49%), Gaps = 11/159 (6%)
Query: 198 LAHKVFESMSERD-VRSWSSLIDGYVKAGEYREAMAVFE---KMRAVGPKANEVTMVSVL 253
+AHK+F+ S+R+ S + I ++ A+++F+ ++ G +EVT+ L
Sbjct: 26 IAHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLAL 85
Query: 254 CACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTD 313
AC G L++G +H + +G + + +++ MY K G + AL +F + D
Sbjct: 86 KACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLV--DPD 141
Query: 314 VLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
V+ WN ++ G + + +L M++ G+ D TY
Sbjct: 142 VVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTY 177
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 218 bits (556), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 145/536 (27%), Positives = 258/536 (48%), Gaps = 76/536 (14%)
Query: 25 KSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNT 84
++ L ++LH+ + S L++D F +++ F AL++ D+ + + F +F+WN+
Sbjct: 19 QTRLNTQKLHSFVTKSKLARDPYFATQLARFYALND--DLISARKLFDVFPERSVFLWNS 76
Query: 85 IIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTG 144
IIR Y+ + LS+F ++LR PD TY LA+ + + + +H I +G
Sbjct: 77 IIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSG 136
Query: 145 HEYDRF-------------------------------IQNSLIHMYASCGNIVWAHKVFD 173
+D+ + N +I Y CG +F+
Sbjct: 137 LGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFN 196
Query: 174 SVQEKN---------------------LVSWN------------------SMLDGYAKCG 194
+Q + LV+W+ ++++ Y++C
Sbjct: 197 LMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCM 256
Query: 195 EMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLC 254
+ A VF S+SE D+ + SSLI GY + G ++EA+ +F ++R G K + V + VL
Sbjct: 257 CIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLG 316
Query: 255 ACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDV 314
+CA L GK +H Y++ GL L + + ++L+DMY+KCG ++ A+ +F G+ ++ ++
Sbjct: 317 SCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEK--NI 374
Query: 315 LIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFES 374
+ +N++I GL HG + F ++ +G+ DE+T+ H GL+ + FE
Sbjct: 375 VSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFER 434
Query: 375 L-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFE 433
+ + G+ P +EHY MV ++ AG+L A++F+ + + +LGALLS C H N
Sbjct: 435 MKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTH 494
Query: 434 LAEIVGRKLIELEPDHDGRY-IGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFS 488
LAE+V + + + Y + LSNVYA RWD+ +R+ + K PG S
Sbjct: 495 LAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 124/320 (38%), Gaps = 43/320 (13%)
Query: 115 LTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDS 174
+ Y F K RL Q+ +H+ + K+ D + L YA +++ A K+FD
Sbjct: 10 IIYEFTRKIQTRLNTQK----LHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDV 65
Query: 175 VQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVF 234
E+++ WNS++ YAK + +F + D R D + A R F
Sbjct: 66 FPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRP-----DNFTYACLARGFSESF 120
Query: 235 EKMRAVGPKANEVTMVSVLCACAHLGALEKG-KMMHKYIVDNGLPLTLVLQTSLVDMYAK 293
+ KG + +H + +GL + +++V Y+K
Sbjct: 121 DT---------------------------KGLRCIHGIAIVSGLGFDQICGSAIVKAYSK 153
Query: 294 CGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYX 353
G I EA +F + D+ +WN MI G G ++ + LF MQ G + + T
Sbjct: 154 AGLIVEASKLFCSIP--DPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMV 211
Query: 354 XXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPME 413
L+ AW K + S +V++ +R +A+A + E
Sbjct: 212 ALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSIS-E 270
Query: 414 PTASMLGALLSG---CINHR 430
P +L++G C NH+
Sbjct: 271 PDLVACSSLITGYSRCGNHK 290
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 218 bits (556), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 139/509 (27%), Positives = 247/509 (48%), Gaps = 39/509 (7%)
Query: 16 TLLSLLDGCKSMLELKQ---LHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
TL S+L C++M L +H +++ G+ + ++ + + S ++ + F
Sbjct: 113 TLSSVLKSCRNMKVLAYGALVHGVVVKLGM-EGSLYVDNAMMNMYATCSVTMEAACLIFR 171
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
+ W T+I G+++ + I L ++ +ML +ASA + + T
Sbjct: 172 DIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTT 231
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G +HA +IK G + NL NS+LD Y +
Sbjct: 232 GKQIHASVIKRGFQ-------------------------------SNLPVMNSILDLYCR 260
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
CG + A F M ++D+ +W++LI ++ + EA+ +F++ + G N T S+
Sbjct: 261 CGYLSEAKHYFHEMEDKDLITWNTLISE-LERSDSSEALLMFQRFESQGFVPNCYTFTSL 319
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT 312
+ ACA++ AL G+ +H I G + L +L+DMYAKCG I ++ VF + R+
Sbjct: 320 VAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRR- 378
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFF 372
+++ W +M+ G +HG E++ LF M + GI+ D + + H GLV++ +F
Sbjct: 379 NLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYF 438
Query: 373 ESLD-KCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHR- 430
++ + G+ P + Y C+VD+L RAG++ AY+ + +MP +P S GA+L C H+
Sbjct: 439 NVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKH 498
Query: 431 NFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSV 490
N ++ + RK++EL+P G Y+ LS +YA +W D +R+ M G KK G S +
Sbjct: 499 NGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWI 558
Query: 491 EICGVSRRFIAHDKTHSDSEETYSMLNFV 519
+ F DK ++ YS+L +
Sbjct: 559 LVENQVFSFAVSDKMCPNASSVYSVLGLL 587
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 82/157 (52%), Gaps = 3/157 (1%)
Query: 185 SMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKA 244
+++ Y + G + A +F+ M +RDV +W+++I GY + A F +M G
Sbjct: 50 NLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSP 109
Query: 245 NEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCG-AIEEALLV 303
NE T+ SVL +C ++ L G ++H +V G+ +L + ++++MYA C +E A L+
Sbjct: 110 NEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLI 169
Query: 304 FHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDM 340
F + K K DV W +I G G L ++K M
Sbjct: 170 FRDI-KVKNDV-TWTTLITGFTHLGDGIGGLKMYKQM 204
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 155/561 (27%), Positives = 248/561 (44%), Gaps = 82/561 (14%)
Query: 10 IANLNQTLLSLLDGC--KSMLELK-QLHAILITSGLSQDEPFISKVLCFSALSNSGDIDY 66
I N Q L+S+L C K + + Q+H L+ SG + I+ +
Sbjct: 2 IPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLN--LITSNYLIDMYCKCREPLM 59
Query: 67 SYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASAR 126
+Y+ F + + W+ ++ G+ + + SLS+F +M R G+ P+ T+ KA
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 119
Query: 127 LLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSM 186
L E G+ +H +K G E + NSL+ MY+ CG I A KVF + +++L+SWN+M
Sbjct: 120 LNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAM 179
Query: 187 LDGYAKCGEMVLAHKVFESMSERDVRS--------------------------------- 213
+ G+ G A F M E +++
Sbjct: 180 IAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRS 239
Query: 214 ----------WSSLIDGYVKAG-------------------------------EYREAMA 232
SL+D YVK G E+ EAM
Sbjct: 240 GFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMG 299
Query: 233 VFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYA 292
+F++++ + + + + S++ A L +GK M V L + S+VDMY
Sbjct: 300 LFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYL 359
Query: 293 KCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
KCG ++EA F + + DV+ W +I G HG ++S+ +F +M I+ DEV Y
Sbjct: 360 KCGLVDEAEKCFAEMQLK--DVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCY 417
Query: 353 XXXXXXXXHGGLVKEAWHFFES-LDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMP 411
H G++KE F L+ G+ P EHYAC+VD+L RAG+L A I MP
Sbjct: 418 LAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMP 477
Query: 412 MEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARG 471
++P + LLS C H + EL + VG+ L+ ++ + Y+ +SN+Y W++
Sbjct: 478 IKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGN 537
Query: 472 MREAMERRGVKKSPGFSSVEI 492
RE +G+KK G S VEI
Sbjct: 538 ARELGNIKGLKKEAGMSWVEI 558
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 157/518 (30%), Positives = 249/518 (48%), Gaps = 44/518 (8%)
Query: 16 TLLSLLDGCKSMLELK---QLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
TL+S L C S+ K Q+H + G+ + + ++ A +G ++ + FS
Sbjct: 417 TLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYA--ETGYLNECRKIFS 474
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPI-QSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQE 131
+ WN+II + S+ + +++ FL R G + +T+ + A + L E
Sbjct: 475 SMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGE 534
Query: 132 TGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYA 191
G +H +K + +N+LI +C Y
Sbjct: 535 LGKQIHGLALKNNIADEATTENALI----AC---------------------------YG 563
Query: 192 KCGEMVLAHKVFESMSER-DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMV 250
KCGEM K+F M+ER D +W+S+I GY+ +A+ + M G + +
Sbjct: 564 KCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYA 623
Query: 251 SVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR 310
+VL A A + LE+G +H V L +V+ ++LVDMY+KCG ++ AL F+ + R
Sbjct: 624 TVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR 683
Query: 311 KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVG-IKADEVTYXXXXXXXXHGGLVKEAW 369
+ WN+MI G A HG EE+L LF+ M+ G D VT+ H GL++E +
Sbjct: 684 NS--YSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGF 741
Query: 370 HFFESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCI- 427
FES+ D G+ P EH++CM DVL RAG+L FI +MPM+P + +L C
Sbjct: 742 KHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCR 801
Query: 428 -NHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPG 486
N R EL + L +LEP++ Y+ L N+YA RW+D R+ M+ VKK G
Sbjct: 802 ANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAG 861
Query: 487 FSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
+S V + F+A DK+H D++ Y L + +M+
Sbjct: 862 YSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMR 899
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 164/356 (46%), Gaps = 42/356 (11%)
Query: 3 GVSPS-FKIANLNQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNS 61
G P+ + +L T SL + +LE Q+ + SGL D F+ L SA + S
Sbjct: 201 GSRPTEYTFGSLVTTACSLTEPDVRLLE--QIMCTIQKSGLLTD-LFVGSGL-VSAFAKS 256
Query: 62 GDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRH-GLAPD---YLTY 117
G + Y+ + F+Q+ + N ++ G K ++ +F+ M ++P+ L
Sbjct: 257 GSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLS 316
Query: 118 PFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQE 177
F + A + + G VH H+I TG L+ GN
Sbjct: 317 SFPEYSLAEEVGLKKGREVHGHVITTG----------LVDFMVGIGN------------- 353
Query: 178 KNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKM 237
+++ YAKCG + A +VF M+++D SW+S+I G + G + EA+ ++ M
Sbjct: 354 -------GLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSM 406
Query: 238 RAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAI 297
R T++S L +CA L + G+ +H + G+ L + + +L+ +YA+ G +
Sbjct: 407 RRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYL 466
Query: 298 EEALLVFHGVSKRKTDVLIWNAMIGGLA-THGSVEESLGLFKDMQAVGIKADEVTY 352
E +F + + D + WN++IG LA + S+ E++ F + Q G K + +T+
Sbjct: 467 NECRKIFSSMPEH--DQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITF 520
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 162/389 (41%), Gaps = 84/389 (21%)
Query: 33 LHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNS 92
H+ L + L +D + ++ +A +GD + + F ++ W I+ GYS +
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLI--NAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRN 80
Query: 93 KNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARL--LNQETGVSVHAHIIKTGHEYDRF 150
++L M++ G+ + + + +A + + G +H + K + D
Sbjct: 81 GEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAV 140
Query: 151 IQNSLIHMYASC-GNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESM--- 206
+ N LI MY C G++ +A F ++ KN VSWNS++ Y++ G+ A ++F SM
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200
Query: 207 -------------------SERDVR-------------------SWSSLIDGYVKAGEYR 228
+E DVR S L+ + K+G
Sbjct: 201 GSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLS 260
Query: 229 EAMAVFEKMRA----------------------------------VGPKANEVTMVSVL- 253
A VF +M V P++ + + S
Sbjct: 261 YARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPE 320
Query: 254 CACAHLGALEKGKMMHKYIVDNGLPLTLV-LQTSLVDMYAKCGAIEEALLVFHGVSKRKT 312
+ A L+KG+ +H +++ GL +V + LV+MYAKCG+I +A VF+ ++ +
Sbjct: 321 YSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDK-- 378
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDMQ 341
D + WN+MI GL +G E++ +K M+
Sbjct: 379 DSVSWNSMITGLDQNGCFIEAVERYKSMR 407
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 136/295 (46%), Gaps = 29/295 (9%)
Query: 150 FIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSER 209
F+Q+ + H A+ + +++ + +K++ N++++ Y + G+ V A KVF+ M R
Sbjct: 9 FVQSCVGHRGAA---RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLR 65
Query: 210 DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEK--GKM 267
+ SW+ ++ GY + GE++EA+ M G +N+ VSVL AC +G++ G+
Sbjct: 66 NCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQ 125
Query: 268 MHKYIVDNGLPLTLVLQTSLVDMYAKC-GAIEEALLVFHGVSKRKTDVLIWNAMIGGLAT 326
+H + + V+ L+ MY KC G++ AL F + + + + WN++I +
Sbjct: 126 IHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNS--VSWNSIISVYSQ 183
Query: 327 HGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFE-----------SL 375
G + +F MQ G + E T+ G LV A E ++
Sbjct: 184 AGDQRSAFRIFSSMQYDGSRPTEYTF---------GSLVTTACSLTEPDVRLLEQIMCTI 234
Query: 376 DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHR 430
K G+ + +V A++G L+ A + QM A L L+ G + +
Sbjct: 235 QKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETR-NAVTLNGLMVGLVRQK 288
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 133/497 (26%), Positives = 241/497 (48%), Gaps = 38/497 (7%)
Query: 31 KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYS 90
KQ+HA+ + G D F + D + + F ++ + WN I
Sbjct: 128 KQIHALAVKCGRILD--VFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSV 185
Query: 91 NSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRF 150
P +++ F++ R P+ +T+ A + L+ G+ +H ++++G + D
Sbjct: 186 TDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVS 245
Query: 151 IQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERD 210
+ N LI D Y KC ++ + +F M ++
Sbjct: 246 VCNGLI-------------------------------DFYGKCKQIRSSEIIFTEMGTKN 274
Query: 211 VRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHK 270
SW SL+ YV+ E +A ++ + R + ++ + SVL ACA + LE G+ +H
Sbjct: 275 AVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHA 334
Query: 271 YIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSV 330
+ V + T+ + ++LVDMY KCG IE++ F + ++ +++ N++IGG A G V
Sbjct: 335 HAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK--NLVTRNSLIGGYAHQGQV 392
Query: 331 EESLGLFKDM--QAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKC-GMTPSSEHY 387
+ +L LF++M + G + +T+ G V+ F+S+ G+ P +EHY
Sbjct: 393 DMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHY 452
Query: 388 ACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEP 447
+C+VD+L RAG + AY+FI +MP++PT S+ GAL + C H +L + L +L+P
Sbjct: 453 SCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDP 512
Query: 448 DHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAHDKTHS 507
G ++ LSN +A RW +A +RE ++ G+KK G+S + + F A D++H
Sbjct: 513 KDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHI 572
Query: 508 DSEETYSMLNFVAYQMK 524
++E + L + +M+
Sbjct: 573 LNKEIQTTLAKLRNEME 589
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 111/234 (47%), Gaps = 11/234 (4%)
Query: 16 TLLSLLDGCKSMLELK---QLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
T + L+ C L L QLH +++ SG D + ++ F I S F+
Sbjct: 211 TFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDF--YGKCKQIRSSEIIFT 268
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
++ + W +++ Y + ++ ++L+ + + + A A + E
Sbjct: 269 EMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLEL 328
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G S+HAH +K E F+ ++L+ MY CG I + + FD + EKNLV+ NS++ GYA
Sbjct: 329 GRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAH 388
Query: 193 CGEMVLAHKVFESMSER------DVRSWSSLIDGYVKAGEYREAMAVFEKMRAV 240
G++ +A +FE M+ R + ++ SL+ +AG M +F+ MR+
Sbjct: 389 QGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRST 442
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 136/315 (43%), Gaps = 40/315 (12%)
Query: 26 SMLELKQLHAILITSGLSQDEPFISKVLC--FSALSNSGDIDYSYRAFSQLSSPR-IFIW 82
SM + +HA ++ + S PF++ L +S L D S R +L+ R + W
Sbjct: 21 SMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKL----DHPESARLVLRLTPARNVVSW 76
Query: 83 NTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIK 142
++I G + + + +L F +M R G+ P+ T+P KA A L TG +HA +K
Sbjct: 77 TSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVK 136
Query: 143 TGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKV 202
G D F+ S MY ++ D A K+
Sbjct: 137 CGRILDVFVGCSAFDMYCKT-------RLRDD------------------------ARKL 165
Query: 203 FESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGAL 262
F+ + ER++ +W++ I V G REA+ F + R + N +T + L AC+ L
Sbjct: 166 FDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHL 225
Query: 263 EKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIG 322
G +H ++ +G + + L+D Y KC I + ++F + + + + W +++
Sbjct: 226 NLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK--NAVSWCSLVA 283
Query: 323 GLATHGSVEESLGLF 337
+ E++ L+
Sbjct: 284 AYVQNHEDEKASVLY 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 6/205 (2%)
Query: 150 FIQNSLIHMYASCGNIVWAH--KVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMS 207
++N++ G +V A K DS L N +++ Y+K A V
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLA--NYLINMYSKLDHPESARLVLRLTP 69
Query: 208 ERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKM 267
R+V SW+SLI G + G + A+ F +MR G N+ T A A L GK
Sbjct: 70 ARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQ 129
Query: 268 MHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATH 327
+H V G L + + S DMY K ++A +F + +R + WNA I T
Sbjct: 130 IHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLET--WNAFISNSVTD 187
Query: 328 GSVEESLGLFKDMQAVGIKADEVTY 352
G E++ F + + + + +T+
Sbjct: 188 GRPREAIEAFIEFRRIDGHPNSITF 212
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 137/511 (26%), Positives = 253/511 (49%), Gaps = 41/511 (8%)
Query: 4 VSPSFKIANLNQTLLSLLDGC---KSMLELKQLHAILITSGLSQDEPFISKVLCFSALSN 60
+ SFK+ T +L++ C KS+ +K+++ ++++G ++ ++++L
Sbjct: 115 IRCSFKVGV--STYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHV--K 170
Query: 61 SGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFL 120
G I + R F ++ ++ + +II G+ N N +++ +F M + T+ +
Sbjct: 171 CGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVM 230
Query: 121 AKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNL 180
+ASA L + G +H +K G + N+ + SCG
Sbjct: 231 LRASAGLGSIYVGKQLHVCALKLG-----VVDNTFV----SCG----------------- 264
Query: 181 VSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAV 240
++D Y+KCG++ A FE M E+ +W+++I GY G EA+ + MR
Sbjct: 265 -----LIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDS 319
Query: 241 GPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEA 300
G ++ T+ ++ L LE K H ++ NG +V T+LVD Y+K G ++ A
Sbjct: 320 GVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTA 379
Query: 301 LLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXX 360
VF + ++ +++ WNA++GG A HG +++ LF+ M A + + VT+
Sbjct: 380 RYVFDKLPRK--NIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACA 437
Query: 361 HGGLVKEAWHFFESLDKC-GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASML 419
+ GL ++ W F S+ + G+ P + HYACM+++L R G L A FI + P++ T +M
Sbjct: 438 YSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMW 497
Query: 420 GALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERR 479
ALL+ C N EL +V KL + P+ G Y+ + N+Y + + +A G+ E +E +
Sbjct: 498 AALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESK 557
Query: 480 GVKKSPGFSSVEICGVSRRFIAHDKTHSDSE 510
G+ P + VE+ + F++ D+ S +E
Sbjct: 558 GLSMMPACTWVEVGDQTHSFLSGDRFDSYNE 588
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 214/438 (48%), Gaps = 38/438 (8%)
Query: 82 WNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPF--LAKASARLLNQETGVSVHAH 139
W +I+G + + +++ F +M GL D YPF + A L G +HA
Sbjct: 238 WAAMIKGLAQNGLAKEAIECFREMKVQGLKMD--QYPFGSVLPACGGLGAINEGKQIHAC 295
Query: 140 IIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLA 199
II+T + ++ ++LI MY C KC + A
Sbjct: 296 IIRTNFQDHIYVGSALIDMYCKC-----------------------------KC--LHYA 324
Query: 200 HKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHL 259
VF+ M +++V SW++++ GY + G EA+ +F M+ G + T+ + ACA++
Sbjct: 325 KTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANV 384
Query: 260 GALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNA 319
+LE+G H + +GL + + SLV +Y KCG I+++ +F+ ++ R D + W A
Sbjct: 385 SSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR--DAVSWTA 442
Query: 320 MIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESL-DKC 378
M+ A G E++ LF M G+K D VT GLV++ +F+ + +
Sbjct: 443 MVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEY 502
Query: 379 GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIV 438
G+ PS HY+CM+D+ +R+G+L A +FI MP P A LLS C N N E+ +
Sbjct: 503 GIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWA 562
Query: 439 GRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRR 498
LIEL+P H Y LS++YA +WD +R M + VKK PG S ++ G
Sbjct: 563 AESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHS 622
Query: 499 FIAHDKTHSDSEETYSML 516
F A D++ ++ Y+ L
Sbjct: 623 FSADDESSPYLDQIYAKL 640
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 152/296 (51%), Gaps = 4/296 (1%)
Query: 57 ALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAP-DYL 115
A S +G I F +L WN +I GYS S ++ + M+R A +
Sbjct: 81 AYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRV 140
Query: 116 TYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSV 175
T + K S+ + G +H +IK G E + + L++MYA+ G I A KVF +
Sbjct: 141 TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGL 200
Query: 176 QEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFE 235
++N V +NS++ G CG + A ++F M E+D SW+++I G + G +EA+ F
Sbjct: 201 DDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFR 259
Query: 236 KMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCG 295
+M+ G K ++ SVL AC LGA+ +GK +H I+ + + ++L+DMY KC
Sbjct: 260 EMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCK 319
Query: 296 AIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVT 351
+ A VF + ++ +V+ W AM+ G G EE++ +F DMQ GI D T
Sbjct: 320 CLHYAKTVFDRMKQK--NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYT 373
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 150/311 (48%), Gaps = 25/311 (8%)
Query: 136 VHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGE 195
+H +II+ + F+ N+++H YA + +A +VFD + + NL SWN++L Y+K G
Sbjct: 28 IHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGL 87
Query: 196 MVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEK-MRAVGPKANEVTMVSVLC 254
+ FE + +RD +W+ LI+GY +G A+ + MR VT++++L
Sbjct: 88 ISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLK 147
Query: 255 ACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDV 314
+ G + GK +H ++ G L++ + L+ MYA G I +A VF+G+ R T
Sbjct: 148 LSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNT-- 205
Query: 315 LIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFES 374
+++N+++GGL G +E++L LF+ G++ D V++ GL KEA F
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFR-----GMEKDSVSWAAMIKGLAQNGLAKEAIECFRE 260
Query: 375 LDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFEL 434
+ G+ + VL G L + G + CI NF+
Sbjct: 261 MKVQGLKMDQYPFG---SVLPACGGLGAINE--------------GKQIHACIIRTNFQD 303
Query: 435 AEIVGRKLIEL 445
VG LI++
Sbjct: 304 HIYVGSALIDM 314
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 145/317 (45%), Gaps = 35/317 (11%)
Query: 16 TLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLS 75
++L G ++ E KQ+HA +I + QD ++ L + Y+ F ++
Sbjct: 275 SVLPACGGLGAINEGKQIHACIIRTNF-QDHIYVGSAL-IDMYCKCKCLHYAKTVFDRMK 332
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVS 135
+ W ++ GY + +++ IFL M R G+ PD+ T A A + + E G
Sbjct: 333 QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQ 392
Query: 136 VHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGE 195
H I +G + + NSL+ +Y CG+I + ++F+ + ++ VSW +M+ YA+ G
Sbjct: 393 FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGR 452
Query: 196 MVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCA 255
V E + +F+KM G K + VT+ V+ A
Sbjct: 453 AV-------------------------------ETIQLFDKMVQHGLKPDGVTLTGVISA 481
Query: 256 CAHLGALEKGKMMHKYIV-DNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDV 314
C+ G +EKG+ K + + G+ ++ + ++D++++ G +EEA+ +G+ D
Sbjct: 482 CSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP-FPPDA 540
Query: 315 LIWNAMIGGLATHGSVE 331
+ W ++ G++E
Sbjct: 541 IGWTTLLSACRNKGNLE 557
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 32/201 (15%)
Query: 26 SMLELKQLHAILITSGLSQDEPFISKVLCFSALSNS--------GDIDYSYRAFSQLSSP 77
S+ E Q H ITSGL + + +SNS GDID S R F++++
Sbjct: 386 SLEEGSQFHGKAITSGL----------IHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR 435
Query: 78 RIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETG---- 133
W ++ Y+ ++++ +F KM++HGL PD +T + A +R E G
Sbjct: 436 DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYF 495
Query: 134 ---VSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQ-EKNLVSWNSMLDG 189
S + + GH + +I +++ G + A + + + + + W ++L
Sbjct: 496 KLMTSEYGIVPSIGH------YSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSA 549
Query: 190 YAKCGEMVLAHKVFESMSERD 210
G + + ES+ E D
Sbjct: 550 CRNKGNLEIGKWAAESLIELD 570
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 143/504 (28%), Positives = 250/504 (49%), Gaps = 40/504 (7%)
Query: 16 TLLSLLDGCKSMLELK---QLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
TL S++ C+ + + + +HA +IT+G + D + + N+G + + FS
Sbjct: 299 TLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLT--QMYLNAGSWREAEKLFS 356
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
++ I W T+I GY + P +++ + M + + PD +T + A A L + +T
Sbjct: 357 RMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDT 416
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
GV +H IK + N+LI+MY+ C K
Sbjct: 417 GVELHKLAIKARLISYVIVANNLINMYSKC-----------------------------K 447
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
C + L +F ++ ++V SW+S+I G EA+ +M+ + + N +T+ +
Sbjct: 448 CIDKAL--DIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK-MTLQPNAITLTAA 504
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT 312
L ACA +GAL GK +H +++ G+ L L +L+DMY +CG + A F+ +K
Sbjct: 505 LAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS---QKK 561
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFF 372
DV WN ++ G + G + LF M ++ DE+T+ +V++ +F
Sbjct: 562 DVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYF 621
Query: 373 ESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNF 432
++ G+TP+ +HYAC+VD+L RAG+L A++FI +MP+ P ++ GALL+ C H
Sbjct: 622 SKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKI 681
Query: 433 ELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEI 492
+L E+ + + EL+ G YI L N+YA +W + +R M+ G+ G S VE+
Sbjct: 682 DLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEV 741
Query: 493 CGVSRRFIAHDKTHSDSEETYSML 516
G F++ DK H ++E ++L
Sbjct: 742 KGKVHAFLSDDKYHPQTKEINTVL 765
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 167/351 (47%), Gaps = 73/351 (20%)
Query: 62 GDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLR-HGLAPDYLTYPFL 120
G++ ++ F ++S +F WN ++ GY+ +++ ++ +ML G+ PD T+P +
Sbjct: 143 GNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCV 202
Query: 121 AKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNL 180
+ + + G VH H+++ G+E D + N+LI MY CG++ A +FD + +++
Sbjct: 203 LRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDI 262
Query: 181 VSWNSMLDGYAKCG------EMVLAHK----------------VFESMSER--------- 209
+SWN+M+ GY + G E+ A + E + +R
Sbjct: 263 ISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAY 322
Query: 210 --------DVRSWSSLIDGYVKAGEYREAMAVFEKM----------------------RA 239
D+ +SL Y+ AG +REA +F +M +A
Sbjct: 323 VITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKA 382
Query: 240 VGP---------KANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDM 290
+ K +E+T+ +VL ACA LG L+ G +HK + L +++ +L++M
Sbjct: 383 IDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINM 442
Query: 291 YAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQ 341
Y+KC I++AL +FH + ++ +V+ W ++I GL + E+L + M+
Sbjct: 443 YSKCKCIDKALDIFHNIPRK--NVISWTSIIAGLRLNNRCFEALIFLRQMK 491
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 95/169 (56%), Gaps = 3/169 (1%)
Query: 184 NSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGP- 242
N+ L + + G +V A VF MSER++ SW+ L+ GY K G + EAM ++ +M VG
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 243 KANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALL 302
K + T VL C + L +GK +H ++V G L + + +L+ MY KCG ++ A L
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 303 VFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVT 351
+F + +R D++ WNAMI G +G E L LF M+ + + D +T
Sbjct: 253 LFDRMPRR--DIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMT 299
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 68/136 (50%), Gaps = 3/136 (2%)
Query: 218 IDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGL 277
+ G G+ EAM + M+ + +E V+++ C A E+G ++ + +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 278 PLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLF 337
L + L + + M+ + G + +A VF +S+R ++ WN ++GG A G +E++ L+
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSER--NLFSWNVLVGGYAKQGYFDEAMCLY 183
Query: 338 KDMQAV-GIKADEVTY 352
M V G+K D T+
Sbjct: 184 HRMLWVGGVKPDVYTF 199
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 122/371 (32%), Positives = 186/371 (50%), Gaps = 34/371 (9%)
Query: 153 NSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVR 212
NS+I Y G++V A +FD +++++ +SWN+M+DGY M A +F M RD
Sbjct: 285 NSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAH 344
Query: 213 SWSSLIDGYVKAG-------------------------------EYREAMAVFEKMRAVG 241
SW+ ++ GY G +Y+EA+ +F +M G
Sbjct: 345 SWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEG 404
Query: 242 PKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEAL 301
K + T+ S+L A L L G MH+ +V +P + + +L+ MY++CG I E+
Sbjct: 405 EKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESR 463
Query: 302 LVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXH 361
+F + K K +V+ WNAMIGG A HG+ E+L LF M++ GI +T+ H
Sbjct: 464 RIFDEM-KLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAH 522
Query: 362 GGLVKEA-WHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLG 420
GLV EA F + + P EHY+ +V+V + GQ A I MP EP ++ G
Sbjct: 523 AGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWG 582
Query: 421 ALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRG 480
ALL C + N LA + + LEP+ Y+ L N+YA + WD+A +R ME +
Sbjct: 583 ALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKR 642
Query: 481 VKKSPGFSSVE 491
+KK G S V+
Sbjct: 643 IKKERGSSWVD 653
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 135/281 (48%), Gaps = 43/281 (15%)
Query: 56 SALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYL 115
S ++ G+++ + F + WN+II Y +K+ +++ +F++M G PD
Sbjct: 351 SGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPH 410
Query: 116 TYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSV 175
T L AS L+N G+ +H ++KT D + N+LI MY+ CG I+ + ++FD +
Sbjct: 411 TLTSLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEM 469
Query: 176 Q-EKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVF 234
+ ++ +++WN+M+ GYA F G EA+ +F
Sbjct: 470 KLKREVITWNAMIGGYA-----------FH--------------------GNASEALNLF 498
Query: 235 EKMRAVGPKANEVTMVSVLCACAHLGALEKGK-----MMHKYIVDNGLPLTLVLQTSLVD 289
M++ G + +T VSVL ACAH G +++ K MM Y ++ + +SLV+
Sbjct: 499 GSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQME----HYSSLVN 554
Query: 290 MYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSV 330
+ + G EEA+ + + + D +W A++ + +V
Sbjct: 555 VTSGQGQFEEAMYIITSMP-FEPDKTVWGALLDACRIYNNV 594
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 165/414 (39%), Gaps = 41/414 (9%)
Query: 61 SGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAP-DYLTYPF 119
SG I + F +L + WNT+I GY + Q+ +F M + + + + +
Sbjct: 53 SGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGY 112
Query: 120 LAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKN 179
++ R L + + D F N++I YA I A +F+ + E+N
Sbjct: 113 VSCGGIRFLEEAR------KLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERN 166
Query: 180 LVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRA 239
VSW++M+ G+ + GE+ A +F M +D +L+ G +K EA V + +
Sbjct: 167 AVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGS 226
Query: 240 VGPKANEVTMV--SVLCACAHLGALEKGKMMHKYIVD-----------NGLPLTLVLQTS 286
+ ++ +++ G +E + + I D +V S
Sbjct: 227 LVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNS 286
Query: 287 LVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIK 346
++ Y K G + A L+F + R D + WN MI G +E++ LF +M
Sbjct: 287 MIKAYLKVGDVVSARLLFDQMKDR--DTISWNTMIDGYVHVSRMEDAFALFSEMP----N 340
Query: 347 ADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSE--HYACMVDVLARAGQLATAY 404
D ++ G V+ A H+FE TP + ++ + A
Sbjct: 341 RDAHSWNMMVSGYASVGNVELARHYFEK------TPEKHTVSWNSIIAAYEKNKDYKEAV 394
Query: 405 QFICQMPME---PTASMLGALLS---GCINHR-NFELAEIVGRKLIELEPDHDG 451
+M +E P L +LLS G +N R ++ +IV + +I P H+
Sbjct: 395 DLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNA 448
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 90/191 (47%), Gaps = 44/191 (23%)
Query: 153 NSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVR 212
N ++ G I A +F+ ++ +N V+WN+M+ GY K EM A K+F+ M +RDV
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 213 SWSSLIDGYVKAGEYR---EAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMH 269
+W+++I GYV G R EA +F++M P + +
Sbjct: 104 TWNTMISGYVSCGGIRFLEEARKLFDEM----PSRDSFSW-------------------- 139
Query: 270 KYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGS 329
+++ YAK I EALL+F + +R + + W+AMI G +G
Sbjct: 140 ---------------NTMISGYAKNRRIGEALLLFEKMPER--NAVSWSAMITGFCQNGE 182
Query: 330 VEESLGLFKDM 340
V+ ++ LF+ M
Sbjct: 183 VDSAVVLFRKM 193
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 223/459 (48%), Gaps = 34/459 (7%)
Query: 62 GDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLA 121
GD+ +++ F+++ + W+ +I + + +++ +F++M + P+ T +
Sbjct: 296 GDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSIL 355
Query: 122 KASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLV 181
A G +H ++K G + D ++ N+LI
Sbjct: 356 NGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALI------------------------- 390
Query: 182 SWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVG 241
D YAKC +M A K+F +S ++ SW+++I GY GE +A ++F +
Sbjct: 391 ------DVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQ 444
Query: 242 PKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEAL 301
EVT S L ACA L +++ G +H + + + SL+DMYAKCG I+ A
Sbjct: 445 VSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQ 504
Query: 302 LVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXH 361
VF+ + DV WNA+I G +THG ++L + M+ K + +T+ +
Sbjct: 505 SVFNEM--ETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSN 562
Query: 362 GGLVKEAWHFFESLDKC-GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLG 420
GL+ + FES+ + G+ P EHY CMV +L R+GQL A + I +P EP+ +
Sbjct: 563 AGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWR 622
Query: 421 ALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRG 480
A+LS +N N E A +++++ P + Y+ +SN+YAG K+W + +R++M+ G
Sbjct: 623 AMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMG 682
Query: 481 VKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFV 519
VKK PG S +E G F H D + ML ++
Sbjct: 683 VKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWL 721
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 163/341 (47%), Gaps = 39/341 (11%)
Query: 16 TLLSLLDGC---KSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
TL S+L+GC K +QLH +++ G D ++S L + +D + + F+
Sbjct: 350 TLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLD-IYVSNAL-IDVYAKCEKMDTAVKLFA 407
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
+LSS WNT+I GY N ++ S+F + LR+ ++ +T+ A A L + +
Sbjct: 408 ELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDL 467
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
GV VH IKT + + NSLI MYA CG+I +A VF+ ++ ++ SWN+++ GY+
Sbjct: 468 GVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYST 527
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
G A ++ + M +RD K N +T + V
Sbjct: 528 HGLGRQALRILDIMKDRDC-------------------------------KPNGLTFLGV 556
Query: 253 LCACAHLGALEKGK-MMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRK 311
L C++ G +++G+ I D+G+ L T +V + + G +++A+ + G+
Sbjct: 557 LSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEP 616
Query: 312 TDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
+ V+IW AM+ + E + +++ + K DE TY
Sbjct: 617 S-VMIWRAMLSASMNQNNEEFARRSAEEILKINPK-DEATY 655
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 135/320 (42%), Gaps = 35/320 (10%)
Query: 33 LHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNS 92
LH+ ++ G + F+ L +A S G +D + F + I +W I+ Y +
Sbjct: 168 LHSPIVKLGYDSN-AFVGAAL-INAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVEN 225
Query: 93 KNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQ 152
SL + M G P+ T+ KAS L + VH I+KT + D +
Sbjct: 226 GYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG 285
Query: 153 NSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVR 212
L+ +Y + G+M A KVF M + DV
Sbjct: 286 VGLLQLYT-------------------------------QLGDMSDAFKVFNEMPKNDVV 314
Query: 213 SWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYI 272
WS +I + + G EA+ +F +MR NE T+ S+L CA G+ +H +
Sbjct: 315 PWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLV 374
Query: 273 VDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEE 332
V G L + + +L+D+YAKC ++ A+ +F +S + + WN +I G G +
Sbjct: 375 VKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNE--VSWNTVIVGYENLGEGGK 432
Query: 333 SLGLFKDMQAVGIKADEVTY 352
+ +F++ + EVT+
Sbjct: 433 AFSMFREALRNQVSVTEVTF 452
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 138/336 (41%), Gaps = 14/336 (4%)
Query: 79 IFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHA 138
+F N ++ Y + +L++F +M P+ F+ A G+
Sbjct: 84 LFATNILLNAYVKAGFDKDALNLFDEM------PERNNVSFVTLAQGYACQDPIGLYSRL 137
Query: 139 HIIKTGHEYDRFIQNSLIHMYASCGN---IVWAHK-VFDSVQEKNLVSWNSMLDGYAKCG 194
H + GHE + + S + ++ S W H + + N ++++ Y+ CG
Sbjct: 138 H--REGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCG 195
Query: 195 EMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLC 254
+ A VFE + +D+ W+ ++ YV+ G + +++ + MR G N T + L
Sbjct: 196 SVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALK 255
Query: 255 ACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDV 314
A LGA + K +H I+ L + L+ +Y + G + +A VF+ + K DV
Sbjct: 256 ASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMP--KNDV 313
Query: 315 LIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFES 374
+ W+ MI +G E++ LF M+ + +E T G
Sbjct: 314 VPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGL 373
Query: 375 LDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQM 410
+ K G ++DV A+ ++ TA + ++
Sbjct: 374 VVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAEL 409
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 6/174 (3%)
Query: 179 NLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMR 238
+L + N +L+ Y K G A +F+ M ER+ S+ +L GY ++ + ++ ++
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLH 138
Query: 239 AVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIE 298
G + N S L L E +H IV G + +L++ Y+ CG+++
Sbjct: 139 REGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVD 198
Query: 299 EALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
A VF G+ + D+++W ++ +G E+SL L M+ G + T+
Sbjct: 199 SARTVFEGILCK--DIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTF 250
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 208 bits (529), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 135/497 (27%), Positives = 231/497 (46%), Gaps = 45/497 (9%)
Query: 39 TSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGY-----SNSK 93
T+ L + + + + +G + + + FS + S + +N +I G+ +
Sbjct: 278 TAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDE 337
Query: 94 NPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQN 153
++ +F+ M R GL P T+ + KA + E G +HA I K + D FI +
Sbjct: 338 ASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGS 397
Query: 154 SLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRS 213
+LI +YA G+ + F S ++++ SW SM
Sbjct: 398 ALIELYALMGSTEDGMQCFASTSKQDIASWTSM--------------------------- 430
Query: 214 WSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIV 273
ID +V+ + A +F ++ + + E T+ ++ ACA AL G+ + Y +
Sbjct: 431 ----IDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAI 486
Query: 274 DNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEES 333
+G+ ++TS + MYAK G + A VF + + DV ++AMI LA HGS E+
Sbjct: 487 KSGIDAFTSVKTSSISMYAKSGNMPLANQVF--IEVQNPDVATYSAMISSLAQHGSANEA 544
Query: 334 LGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESL-DKCGMTPSSEHYACMVD 392
L +F+ M+ GIK ++ + HGGLV + +F+ + + + P+ +H+ C+VD
Sbjct: 545 LNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVD 604
Query: 393 VLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGR 452
+L R G+L+ A I + ALLS C +++ + + V +L+ELEP+ G
Sbjct: 605 LLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGS 664
Query: 453 YIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEET 512
Y+ L N+Y A +RE M RGVKK P S + I + F D +H S+
Sbjct: 665 YVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMI 724
Query: 513 YSML------NFVAYQM 523
Y+ML +FV Y +
Sbjct: 725 YTMLETMDNVDFVDYTL 741
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 136/298 (45%), Gaps = 41/298 (13%)
Query: 63 DIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAK 122
++ ++ + F ++ I +N++I GY+ Q++ +FL+ L D TY
Sbjct: 97 ELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALG 156
Query: 123 ASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVS 182
+ + G +H ++ G F+ N LI MY+ CG + A +FD E++ VS
Sbjct: 157 FCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVS 216
Query: 183 WNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGP 242
WNS+ I GYV+ G E + + KM G
Sbjct: 217 WNSL-------------------------------ISGYVRVGAAEEPLNLLAKMHRDGL 245
Query: 243 KANEVTMVSVLCACA---HLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEE 299
+ SVL AC + G +EKG +H Y G+ +V++T+L+DMYAK G+++E
Sbjct: 246 NLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKE 305
Query: 300 ALLVFHGVSKRKTDVLIWNAMIGGL-----ATHGSVEESLGLFKDMQAVGIKADEVTY 352
A+ +F + + +V+ +NAMI G T + E+ LF DMQ G++ T+
Sbjct: 306 AIKLFSLMPSK--NVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTF 361
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 173/400 (43%), Gaps = 34/400 (8%)
Query: 33 LHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNS 92
LH +++ +GLSQ + F+ VL S G +D + F + WN++I GY
Sbjct: 170 LHGLVVVNGLSQ-QVFLINVL-IDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRV 227
Query: 93 KNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQ---ETGVSVHAHIIKTGHEYDR 149
+ L++ KM R GL + KA LN+ E G+++H + K G E+D
Sbjct: 228 GAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDI 287
Query: 150 FIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSER 209
++ +L+ MYA G++ A K+F + KN+V++N+M+ G+ + E+
Sbjct: 288 VVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEIT------------ 335
Query: 210 DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMH 269
D S EA +F M+ G + + T VL AC+ LE G+ +H
Sbjct: 336 DEAS--------------SEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIH 381
Query: 270 KYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGS 329
I N + ++L+++YA G+ E+ + F SK+ D+ W +MI +
Sbjct: 382 ALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQ--DIASWTSMIDCHVQNEQ 439
Query: 330 VEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYAC 389
+E + LF+ + + I+ +E T + K G+ +
Sbjct: 440 LESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTS 499
Query: 390 MVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINH 429
+ + A++G + A Q ++ P + A++S H
Sbjct: 500 SISMYAKSGNMPLANQVFIEVQ-NPDVATYSAMISSLAQH 538
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 117/241 (48%), Gaps = 10/241 (4%)
Query: 190 YAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTM 249
Y KC E+ A ++F+ M ER++ S++SLI GY + G Y +AM +F + R K ++ T
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 250 VSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSK 309
L C L+ G+++H +V NGL + L L+DMY+KCG +++A+ +F +
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211
Query: 310 RKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXX-----HGGL 364
R D + WN++I G G+ EE L L M G+ TY + G
Sbjct: 212 R--DQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNL--TTYALGSVLKACCINLNEGF 267
Query: 365 VKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLS 424
+++ K GM ++D+ A+ G L A + MP + + A++S
Sbjct: 268 IEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVT-YNAMIS 326
Query: 425 G 425
G
Sbjct: 327 G 327
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 152/496 (30%), Positives = 241/496 (48%), Gaps = 55/496 (11%)
Query: 17 LLSLLD-GCKSMLELKQLHAILITSGLSQDEPFISKVL---CFSALSNSGDIDYSYRAFS 72
LSLL K++++ KQ+HA L+ +G D K++ C + S F
Sbjct: 10 FLSLLQQNSKTLIQAKQIHAQLVING-CHDNSLFGKLIGHYCSKPSTESSSKLAHLLVFP 68
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
+ P F++NT+++ P S+ IF + +K+S LN+ T
Sbjct: 69 RFGHPDKFLFNTLLK----CSKPEDSIRIFAN--------------YASKSSLLYLNERT 110
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAH-KVFDSVQEKNLVSWNSMLDGYA 191
V V G ++L G IV K + E L+ ++L YA
Sbjct: 111 FVFV------LGACARSASSSAL-----RVGRIVHGMVKKLGFLYESELIG-TTLLHFYA 158
Query: 192 KCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEY-----REAMAVFEKMRAVGP--KA 244
K G++ A KVF+ M ER +W+++I GY + R+AM +F + G +
Sbjct: 159 KNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRP 218
Query: 245 NEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLP--LTLVLQTSLVDMYAKCGAIEEALL 302
+ TMV VL A + G LE G ++H YI G + + + T+LVDMY+KCG + A
Sbjct: 219 TDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFS 278
Query: 303 VFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHG 362
VF + + +V W +M GLA +G E+ L M GIK +E+T+ H
Sbjct: 279 VFELMKVK--NVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHI 336
Query: 363 GLVKEAWHFFESLD-KCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGA 421
GLV+E F+S+ + G+TP EHY C+VD+L +AG++ AYQFI MP++P A +L +
Sbjct: 337 GLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRS 396
Query: 422 LLSGCINHRNFELAEIVGRKLIELEPDHDG-------RYIGLSNVYAGVKRWDDARGMRE 474
L + C + + E +G+ L+E+E + + Y+ LSNV A +W + +R+
Sbjct: 397 LCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRK 456
Query: 475 AMERRGVKKSPGFSSV 490
M+ R +K PG+S V
Sbjct: 457 EMKERRIKTRPGYSFV 472
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/514 (26%), Positives = 244/514 (47%), Gaps = 37/514 (7%)
Query: 16 TLLSLLDGCKSMLEL-KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQL 74
TL L+ C ++L KQLH ++ G + + + S G + + F +
Sbjct: 142 TLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTY--YSKGGLLREAVSVFYGM 199
Query: 75 SSPRIFI-WNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETG 133
R + WN++I Y K ++L+++ +M+ G D T + A L + G
Sbjct: 200 DELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGG 259
Query: 134 VSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKC 193
H +IK G + + + LI Y+ CG C
Sbjct: 260 RQFHGKLIKAGFHQNSHVGSGLIDFYSKCGG----------------------------C 291
Query: 194 GEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEY-REAMAVFEKMRAVGPKANEVTMVSV 252
M + KVF+ + D+ W+++I GY E EA+ F +M+ +G + ++ + V V
Sbjct: 292 DGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCV 351
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLV-LQTSLVDMYAKCGAIEEALLVFHGVSKRK 311
AC++L + + K +H + + +P + + +L+ +Y K G +++A VF + +
Sbjct: 352 TSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPE-- 409
Query: 312 TDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHF 371
+ + +N MI G A HG E+L L++ M GI +++T+ H G V E +
Sbjct: 410 LNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEY 469
Query: 372 FESLDKC-GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHR 430
F ++ + + P +EHY+CM+D+L RAG+L A +FI MP +P + ALL C H+
Sbjct: 470 FNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHK 529
Query: 431 NFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSV 490
N LAE +L+ ++P Y+ L+N+YA ++W++ +R++M + ++K PG S +
Sbjct: 530 NMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWI 589
Query: 491 EICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
E+ F+A D +H E L + +MK
Sbjct: 590 EVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMK 623
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 146/296 (49%), Gaps = 5/296 (1%)
Query: 132 TGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYA 191
TG S+HA +K+ ++ N +++Y+ CG + +A F S +E N+ S+N ++ YA
Sbjct: 26 TGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYA 85
Query: 192 KCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVS 251
K ++ +A ++F+ + + D S+++LI GY A E AM +F++MR +G + + T+
Sbjct: 86 KDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSG 145
Query: 252 VLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRK 311
++ AC ++ K +H + V G + + V Y+K G + EA+ VF+G+ + +
Sbjct: 146 LIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELR 203
Query: 312 TDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHF 371
+V WN+MI H ++L L+K+M G K D T + F
Sbjct: 204 DEV-SWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQF 262
Query: 372 FESLDKCGMTPSSEHYACMVDVLARAGQLATAY--QFICQMPMEPTASMLGALLSG 425
L K G +S + ++D ++ G Y + + Q + P + ++SG
Sbjct: 263 HGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISG 318
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 143/316 (45%), Gaps = 41/316 (12%)
Query: 43 SQDEPFI-SKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSI 101
S +EP + S + A + I + + F ++ P +NT+I GY++++ ++ +
Sbjct: 68 STEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVL 127
Query: 102 FLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYAS 161
F +M + G D T L A DR +H ++
Sbjct: 128 FKRMRKLGFEVDGFTLSGLIAACC----------------------DRVDLIKQLHCFSV 165
Query: 162 CGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSE-RDVRSWSSLIDG 220
G FDS N N+ + Y+K G + A VF M E RD SW+S+I
Sbjct: 166 SGG-------FDSYSSVN----NAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVA 214
Query: 221 YVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLT 280
Y + E +A+A++++M G K + T+ SVL A L L G+ H ++ G
Sbjct: 215 YGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQN 274
Query: 281 LVLQTSLVDMYAKCGAIE---EALLVFHGVSKRKTDVLIWNAMIGGLATHGSV-EESLGL 336
+ + L+D Y+KCG + ++ VF + D+++WN MI G + + + EE++
Sbjct: 275 SHVGSGLIDFYSKCGGCDGMYDSEKVFQEI--LSPDLVVWNTMISGYSMNEELSEEAVKS 332
Query: 337 FKDMQAVGIKADEVTY 352
F+ MQ +G + D+ ++
Sbjct: 333 FRQMQRIGHRPDDCSF 348
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 221/463 (47%), Gaps = 36/463 (7%)
Query: 31 KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYS 90
+ HA+++ Q+ +S L L D ++ F Q+ W +I G
Sbjct: 169 RMFHALVLVDERMQESVLLSTALVDMYL-KFDDHAAAFHVFDQMEVKNEVSWTAMISGCV 227
Query: 91 NSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGV-SVHAHIIKTGHEYDR 149
++N + +F M R L P+ +T + A L + V +H + G D
Sbjct: 228 ANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADE 287
Query: 150 FIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSER 209
+ + + MY +CG + L+ +FE+ R
Sbjct: 288 RLTAAFMTMYC-------------------------------RCGNVSLSRVLFETSKVR 316
Query: 210 DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMH 269
DV WSS+I GY + G+ E M + +MR G +AN VT+++++ AC + L +H
Sbjct: 317 DVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVH 376
Query: 270 KYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGS 329
I+ G ++L +L+DMYAKCG++ A VF+ ++++ D++ W++MI HG
Sbjct: 377 SQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEK--DLVSWSSMINAYGLHGH 434
Query: 330 VEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYAC 389
E+L +FK M G + D++ + H GLV+EA F K M + EHYAC
Sbjct: 435 GSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYAC 494
Query: 390 MVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELA-EIVGRKLIELEPD 448
+++L R G++ A++ MPM+P+A + +LLS C H ++A +I+ +L++ EPD
Sbjct: 495 YINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPD 554
Query: 449 HDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVE 491
+ Y+ LS ++ + A +R M+RR + K GFS +E
Sbjct: 555 NPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 142/320 (44%), Gaps = 38/320 (11%)
Query: 16 TLLSLLDGCKSMLE----LKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAF 71
TLLS+L C + +K++H G DE + + + G++ S F
Sbjct: 253 TLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFM--TMYCRCGNVSLSRVLF 310
Query: 72 SQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQE 131
+ +W+++I GY+ + + + +++ +M + G+ + +T + A
Sbjct: 311 ETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLS 370
Query: 132 TGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYA 191
+VH+ I+K G + N+LI MYA CG++ A +VF + EK+LVSW+SM++ Y
Sbjct: 371 FASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYG 430
Query: 192 KCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVS 251
G EA+ +F+ M G + +++ ++
Sbjct: 431 -------------------------------LHGHGSEALEIFKGMIKGGHEVDDMAFLA 459
Query: 252 VLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRK 311
+L AC H G +E+ + + +P+TL +++ + G I++A V + K
Sbjct: 460 ILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINM-PMK 518
Query: 312 TDVLIWNAMIGGLATHGSVE 331
IW++++ THG ++
Sbjct: 519 PSARIWSSLLSACETHGRLD 538
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 146/385 (37%), Gaps = 81/385 (21%)
Query: 104 KMLRHGLAPDYLT--YPFLAKASARLLNQET---GVSVHAHIIKTGHEYDRFIQNSLIHM 158
K+ H L + T P + KA A QE G +H +K G + D + NSLI M
Sbjct: 34 KLKIHSLGTNGFTAILPSVIKACA--FQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISM 91
Query: 159 YASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLI 218
YA K KVF+ M RD S+ S+I
Sbjct: 92 YA-------------------------------KFSRKYAVRKVFDEMLHRDTVSYCSII 120
Query: 219 DGYVKAGEYREAMAVFEKMRAVG--PKANEVTMVSVLCACAHLGALEK-GKMMHKYI-VD 274
+ + G EAM + ++M G PK+ V S+L C +G+ K +M H + VD
Sbjct: 121 NSCCQDGLLYEAMKLIKEMYFYGFIPKSELVA--SLLALCTRMGSSSKVARMFHALVLVD 178
Query: 275 NGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESL 334
+ +++L T+LVDMY K A VF + + + W AMI G + + E +
Sbjct: 179 ERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNE--VSWTAMISGCVANQNYEMGV 236
Query: 335 GLFKDMQAVGIKADEVT------------YXXXXXXXXHGGLVKEAWHFFESLD------ 376
LF+ MQ ++ + VT Y HG + H E L
Sbjct: 237 DLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTM 296
Query: 377 --KCGMTPSSE------------HYACMVDVLARAGQLATAYQFICQMP---MEPTASML 419
+CG S ++ M+ A G + + QM +E + L
Sbjct: 297 YCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTL 356
Query: 420 GALLSGCINHRNFELAEIVGRKLIE 444
A++S C N A V ++++
Sbjct: 357 LAIVSACTNSTLLSFASTVHSQILK 381
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 239/477 (50%), Gaps = 52/477 (10%)
Query: 15 QTLLSLLDGCKSMLELK---QLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAF 71
+ SLL+ C S+ + ++H ++ L + SK++ A + G + ++ F
Sbjct: 93 EIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYA--SCGYAEVAHEVF 150
Query: 72 SQLS----SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARL 127
++S SP F WN++I GY+ +++++ +M G+ PD T+P + KA +
Sbjct: 151 DRMSKRDSSP--FAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGI 208
Query: 128 LNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSML 187
+ + G ++H ++K G YD ++ N+L+ MYA
Sbjct: 209 GSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYA--------------------------- 241
Query: 188 DGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEV 247
KCG++V A VF+ + +D SW+S++ GY+ G EA+ +F M G + ++V
Sbjct: 242 ----KCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKV 297
Query: 248 TMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGV 307
+ SVL A + + + G+ +H +++ G+ L + +L+ +Y+K G + +A +F +
Sbjct: 298 AISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQM 354
Query: 308 SKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKE 367
+R D + WNA+I + H L F+ M K D +T+ + G+V++
Sbjct: 355 LER--DTVSWNAII---SAHSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVED 409
Query: 368 AWHFFESLDK-CGMTPSSEHYACMVDVLARAGQLATAYQFICQ-MPMEPTASMLGALLSG 425
F + K G+ P EHYACMV++ RAG + AY I Q M +E ++ GALL
Sbjct: 410 GERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYA 469
Query: 426 CINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVK 482
C H N ++ E+ ++L ELEPD++ + L +Y+ KR +D +R+ M RG++
Sbjct: 470 CYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 111/250 (44%), Gaps = 7/250 (2%)
Query: 251 SVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR 310
S+L C L A++ G +H I L L + + LV +YA CG E A VF +SKR
Sbjct: 97 SLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKR 156
Query: 311 KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWH 370
+ WN++I G A G E+++ L+ M G+K D T+ G V+
Sbjct: 157 DSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEA 216
Query: 371 FFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHR 430
L K G +V + A+ G + A +P + S ++L+G ++H
Sbjct: 217 IHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSW-NSMLTGYLHHG 275
Query: 431 NFELAEIVGRKLIE--LEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFS 488
A + R +++ +EPD + +S+V A V + R + + RRG++ +
Sbjct: 276 LLHEALDIFRLMVQNGIEPDK----VAISSVLARVLSFKHGRQLHGWVIRRGMEWELSVA 331
Query: 489 SVEICGVSRR 498
+ I S+R
Sbjct: 332 NALIVLYSKR 341
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 205 bits (521), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 116/337 (34%), Positives = 180/337 (53%), Gaps = 3/337 (0%)
Query: 190 YAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTM 249
Y GE+ A+KVFE M ER+V SW+++I G+ + + ++ KMR N+ T
Sbjct: 165 YRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTF 224
Query: 250 VSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSK 309
++L AC GAL +G+ +H + GL L + SL+ MY KCG +++A +F S
Sbjct: 225 TALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSN 284
Query: 310 RKTDVLIWNAMIGGLATHGSVEESLGLFKDMQA-VGIKADEVTYXXXXXXXXHGGLVKEA 368
+ DV+ WN+MI G A HG +++ LF+ M G K D +TY H GLVKE
Sbjct: 285 K--DVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEG 342
Query: 369 WHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCIN 428
FF + + G+ P HY+C+VD+L R G L A + I MPM+P + + G+LL C
Sbjct: 343 RKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRV 402
Query: 429 HRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFS 488
H + + + LEPD ++ L+N+YA V W +A +R+ M+ +G+K +PG S
Sbjct: 403 HGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCS 462
Query: 489 SVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMKL 525
+EI F A D ++ E +L+ + M+
Sbjct: 463 WIEINNYVFMFKAEDGSNCRMLEIVHVLHCLIDHMEF 499
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 139/310 (44%), Gaps = 42/310 (13%)
Query: 48 FISKVLCFSAL----SNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFL 103
FIS V S+L +SG+++ +Y+ F ++ + W +I G++ L ++
Sbjct: 151 FISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYS 210
Query: 104 KMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCG 163
KM + P+ T+ L A G SVH + G + I NSLI MY CG
Sbjct: 211 KMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCG 270
Query: 164 NIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVK 223
++ A ++FD K++VSWNSM+ GYA+ G + A ++FE M
Sbjct: 271 DLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELM----------------- 313
Query: 224 AGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVL 283
M G K + +T + VL +C H G +++G+ + ++GL L
Sbjct: 314 -------------MPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNH 360
Query: 284 QTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSV-------EESLGL 336
+ LVD+ + G ++EAL + + + V IW +++ HG V EE L L
Sbjct: 361 YSCLVDLLGRFGLLQEALELIENMPMKPNSV-IWGSLLFSCRVHGDVWTGIRAAEERLML 419
Query: 337 FKDMQAVGIK 346
D A ++
Sbjct: 420 EPDCAATHVQ 429
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 138/484 (28%), Positives = 224/484 (46%), Gaps = 36/484 (7%)
Query: 29 ELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRG 88
E ++ H + + GL F+ L G + ++ + + +I G
Sbjct: 183 EAQRSHGLAVILGLEVSNVFVGSAL-VDMYVKFGKTREAKLVLDRVEEKDVVLITALIVG 241
Query: 89 YSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYD 148
YS +++ F ML + P+ TY + + L + G +H ++K+G E
Sbjct: 242 YSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESA 301
Query: 149 RFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSE 208
Q SL+ MY C + + +VF ++ N VS
Sbjct: 302 LASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVS-------------------------- 335
Query: 209 RDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMM 268
W+SLI G V+ G A+ F KM K N T+ S L C++L E+G+ +
Sbjct: 336 -----WTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQI 390
Query: 269 HKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHG 328
H + G + L+D+Y KCG + A LVF +S + DV+ N MI A +G
Sbjct: 391 HGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLS--EVDVISLNTMIYSYAQNG 448
Query: 329 SVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYA 388
E+L LF+ M +G++ ++VT + LV+E F+S K + +++HYA
Sbjct: 449 FGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYA 508
Query: 389 CMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPD 448
CMVD+L RAG+L A ++ + P + LLS C HR E+AE + RK++E+EP
Sbjct: 509 CMVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPG 567
Query: 449 HDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAHDK-THS 507
+G I +SN+YA +W+ M+ M+ +KK+P S VEI + F+A D +H
Sbjct: 568 DEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHP 627
Query: 508 DSEE 511
+SE+
Sbjct: 628 NSEQ 631
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 172/388 (44%), Gaps = 38/388 (9%)
Query: 12 NLNQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAF 71
N +Q L +D +S+ +K + A ++ SG + IS A GDIDY+ + F
Sbjct: 67 NFSQLLRQCIDE-RSISGIKTIQAHMLKSGFPAE---ISGSKLVDASLKCGDIDYARQVF 122
Query: 72 SQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQE 131
+S I WN++I + +++ ++ M+ + + PD T + KA + L ++
Sbjct: 123 DGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEK 182
Query: 132 TGVSVHAHIIKTGHEYDR-FIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGY 190
H + G E F+ ++L+ MY G A V D V+EK++V +++ GY
Sbjct: 183 EAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGY 242
Query: 191 AKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMV 250
++ GE A K F+SM + EK+ + NE T
Sbjct: 243 SQKGEDTEAVKAFQSM--------------------------LVEKV-----QPNEYTYA 271
Query: 251 SVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR 310
SVL +C +L + GK++H +V +G L QTSL+ MY +C ++++L VF +
Sbjct: 272 SVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIE-- 329
Query: 311 KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWH 370
+ + W ++I GL +G E +L F+ M IK + T + + +E
Sbjct: 330 YPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQ 389
Query: 371 FFESLDKCGMTPSSEHYACMVDVLARAG 398
+ K G + ++D+ + G
Sbjct: 390 IHGIVTKYGFDRDKYAGSGLIDLYGKCG 417
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 141/319 (44%), Gaps = 38/319 (11%)
Query: 16 TLLSLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
T S+L C ++ ++ K +H +++ SG + S+ + +D S R F
Sbjct: 269 TYASVLISCGNLKDIGNGKLIHGLMVKSGF--ESALASQTSLLTMYLRCSLVDDSLRVFK 326
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
+ P W ++I G + +L F KM+R + P+ T + + L E
Sbjct: 327 CIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEE 386
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G +H + K G + D++ + LI +Y CG A VFD++ E +++S N+M+ YA
Sbjct: 387 GRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYA- 445
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
+ G REA+ +FE+M +G + N+VT++SV
Sbjct: 446 ------------------------------QNGFGREALDLFERMINLGLQPNDVTVLSV 475
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT 312
L AC + +E+G + + + LT +VD+ + G +EEA ++ V
Sbjct: 476 LLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVI--NP 533
Query: 313 DVLIWNAMIGGLATHGSVE 331
D+++W ++ H VE
Sbjct: 534 DLVLWRTLLSACKVHRKVE 552
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 149/343 (43%), Gaps = 45/343 (13%)
Query: 129 NQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLD 188
NQ + + + T H + + ++ + S + AH + + +S + ++D
Sbjct: 50 NQFRLLCITCDTLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAE--ISGSKLVD 107
Query: 189 GYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVT 248
KCG++ A +VF+ MSER + +W+SLI +K +EA+ ++ M +E T
Sbjct: 108 ASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYT 167
Query: 249 MVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLV-LQTSLVDMYAKCGAIEEALLVFHGV 307
+ SV A + L ++ + H V GL ++ V + ++LVDMY K G EA LV V
Sbjct: 168 LSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRV 227
Query: 308 SKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXX--------- 358
++ DV++ A+I G + G E++ F+ M ++ +E TY
Sbjct: 228 EEK--DVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGN 285
Query: 359 --XXHGGLVKEAWHFFES-----------------------LDKCGMTPSSEHYACMVDV 393
HG +VK FES + KC P+ + ++
Sbjct: 286 GKLIHGLMVKSG---FESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISG 342
Query: 394 LARAGQLATA---YQFICQMPMEPTASMLGALLSGCINHRNFE 433
L + G+ A ++ + + ++P + L + L GC N FE
Sbjct: 343 LVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFE 385
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 137/431 (31%), Positives = 213/431 (49%), Gaps = 48/431 (11%)
Query: 83 NTIIRGYSNSKNPIQSLSIFLKMLRHGLA-PDYLTYPFLAK-ASARLLNQETGVSVHAHI 140
N ++ Y S PI++L F R + D + F K +SA+ + G +HA +
Sbjct: 32 NHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALV 91
Query: 141 IKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK-NLVSWNSMLDGYAKCGEMVLA 199
K G IQ SL+ Y+S G++ +A +VFD EK N+V W +M+ Y + V
Sbjct: 92 RKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSV-- 149
Query: 200 HKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHL 259
EA+ +F++M A + + V + L ACA L
Sbjct: 150 -----------------------------EAIELFKRMEAEKIELDGVIVTVALSACADL 180
Query: 260 GALEKGKMMHKYIVDNG--LPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIW 317
GA++ G+ ++ + L + L L+ SL++MY K G E+A +F S RK DV +
Sbjct: 181 GAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDE-SMRK-DVTTY 238
Query: 318 NAMIGGLATHGSVEESLGLFKDMQAVG------IKADEVTYXXXXXXXXHGGLVKEAWHF 371
+MI G A +G +ESL LFK M+ + I ++VT+ H GLV+E
Sbjct: 239 TSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRH 298
Query: 372 FESLD-KCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHR 430
F+S+ + P H+ CMVD+ R+G L A++FI QMP++P + LL C H
Sbjct: 299 FKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHG 358
Query: 431 NFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSV 490
N EL E V R++ EL+ DH G Y+ LSN+YA WD+ MR+ + +R + PG S +
Sbjct: 359 NVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKR---RMPGKSWI 415
Query: 491 EICGVSRRFIA 501
E+ + F++
Sbjct: 416 ELGSIINEFVS 426
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 201 bits (511), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 134/528 (25%), Positives = 237/528 (44%), Gaps = 74/528 (14%)
Query: 69 RAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLA-PDYLTYPFLAKASARL 127
+ F + + W +++GY NS + L +F M G + P+ + K+ +
Sbjct: 90 KLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNS 149
Query: 128 LNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYA--------------------------- 160
E G H +K G F++N+L++MY+
Sbjct: 150 GRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSAL 209
Query: 161 ----SCG---------------NIVWAH-------KVFDSVQEKNLV------------- 181
CG + VW + ++F ++++ NL
Sbjct: 210 SGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFN 269
Query: 182 ----SWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKM 237
+ ++++ Y KCG+++ A +VF+ +++ ++++D Y + + EA+ +F KM
Sbjct: 270 AEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKM 329
Query: 238 RAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAI 297
NE T +L + A L L++G ++H ++ +G +++ +LV+MYAK G+I
Sbjct: 330 DTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSI 389
Query: 298 EEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXX 357
E+A F G++ R D++ WN MI G + HG E+L F M G + +T+
Sbjct: 390 EDARKAFSGMTFR--DIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQ 447
Query: 358 XXXHGGLVKEAWHFFESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTA 416
H G V++ H+F L K + P +HY C+V +L++AG A F+ P+E
Sbjct: 448 ACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDV 507
Query: 417 SMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAM 476
LL+ C RN+ L + V IE P+ G Y+ LSN++A + W+ +R M
Sbjct: 508 VAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLM 567
Query: 477 ERRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
RGVKK PG S + I + F+A D H + Y+ + V ++K
Sbjct: 568 NNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIK 615
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 122/304 (40%), Gaps = 42/304 (13%)
Query: 110 LAPDYLTYPF-------LAKASARLLNQETGVSVHAHIIKTGHEY---DRFIQNSLIHMY 159
L P PF L K A G S+HAH+I T D + NSLI++Y
Sbjct: 20 LVPKSKKTPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLY 79
Query: 160 ASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLID 219
C V A K+FD + E+N+VSW +M+ GY G K+F+SM
Sbjct: 80 VKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSM------------- 126
Query: 220 GYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPL 279
+GE R NE V +C++ G +E+GK H + GL
Sbjct: 127 --FFSGESR---------------PNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLIS 169
Query: 280 TLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKD 339
++ +LV MY+ C EA+ V + D+ ++++ + G G+ +E L + +
Sbjct: 170 HEFVRNTLVYMYSLCSGNGEAIRVLDDLP--YCDLSVFSSALSGYLECGAFKEGLDVLRK 227
Query: 340 MQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQ 399
+ +TY + + A + + G E ++++ + G+
Sbjct: 228 TANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGK 287
Query: 400 LATA 403
+ A
Sbjct: 288 VLYA 291
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 146/501 (29%), Positives = 236/501 (47%), Gaps = 45/501 (8%)
Query: 33 LHAILITSGLSQDEPFISK-VLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSN 91
LH + + G + D ++ V+ + L +I+ + + F ++ P + W ++I GY++
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLK---EINTARKLFDEMCEPNVVSWTSVISGYND 107
Query: 92 SKNPIQSLSIFLKMLR-HGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRF 150
P +LS+F KM + P+ T+ + KA + L G ++HA + +G
Sbjct: 108 MGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISG------ 161
Query: 151 IQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESM--SE 208
+N+V +S++D Y KC ++ A +VF+SM
Sbjct: 162 -------------------------LRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYG 196
Query: 209 RDVRSWSSLIDGYVKAGEYREAMAVFEKMRA--VGPKANEVTMVSVLCACAHLGALEKGK 266
R+V SW+S+I Y + EA+ +F A +AN+ + SV+ AC+ LG L+ GK
Sbjct: 197 RNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGK 256
Query: 267 MMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLAT 326
+ H + G V+ TSL+DMYAKCG++ A +F + R V+ + +MI A
Sbjct: 257 VAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRI--RCHSVISYTSMIMAKAK 314
Query: 327 HGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESL-DKCGMTPSSE 385
HG E ++ LF +M A I + VT H GLV E + + +K G+ P S
Sbjct: 315 HGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSR 374
Query: 386 HYACMVDVLARAGQLATAYQF--ICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLI 443
HY C+VD+L R G++ AY+ ++ E A + GALLS H E+ ++LI
Sbjct: 375 HYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLI 434
Query: 444 ELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAHD 503
+ YI LSN YA W+D+ +R M+R G K S +E F A D
Sbjct: 435 QSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGD 494
Query: 504 KTHSDSEETYSMLNFVAYQMK 524
+ +S E L + +MK
Sbjct: 495 LSCDESGEIERFLKDLEKRMK 515
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 141/331 (42%), Gaps = 54/331 (16%)
Query: 16 TLLSLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
T S+ C ++ E K +HA L SGL ++ S ++ N D++ + R F
Sbjct: 133 TFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCN--DVETARRVFD 190
Query: 73 QL--SSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAK---ASARL 127
+ + W ++I Y+ + +++ +F + L D LA A + L
Sbjct: 191 SMIGYGRNVVSWTSMITAYAQNARGHEAIELF-RSFNAALTSDRANQFMLASVISACSSL 249
Query: 128 LNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSML 187
+ G H + + G+E + + SL+ MYA CG++ A K+F ++ +++S+ SM+
Sbjct: 250 GRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMI 309
Query: 188 DGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEV 247
AK G GE A+ +F++M A N V
Sbjct: 310 MAKAKHG-----------------------------LGE--AAVKLFDEMVAGRINPNYV 338
Query: 248 TMVSVLCACAHLGALEKG-----KMMHKY-IVDNGLPLTLVLQTSLVDMYAKCGAIEEAL 301
T++ VL AC+H G + +G M KY +V + T V VDM + G ++EA
Sbjct: 339 TLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCV-----VDMLGRFGRVDEAY 393
Query: 302 LVFHGVS-KRKTDVLIWNAMIGGLATHGSVE 331
+ + + L+W A++ HG VE
Sbjct: 394 ELAKTIEVGAEQGALLWGALLSAGRLHGRVE 424
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 136/497 (27%), Positives = 229/497 (46%), Gaps = 46/497 (9%)
Query: 1 MPGVSPSFKIANLNQTLLSLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSA 57
M GV P+ T +L+GC + K +HA +I S D P + +L
Sbjct: 293 MSGVDPT------QFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALL--DM 344
Query: 58 LSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLA-PDYLT 116
+ GD+ ++ F ++ +P + WN+II G S + Q++ ++ ++LR PD T
Sbjct: 345 YCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYT 404
Query: 117 YPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQ 176
+ A+A G +H + K G+E F+ +L+ MY
Sbjct: 405 FSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYF---------------- 448
Query: 177 EKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEK 236
K E A KVF+ M ERDV W+ +I G+ + G A+ F +
Sbjct: 449 ---------------KNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIE 493
Query: 237 MRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGA 296
M +++ ++ SV+ AC+ + L +G++ H + G + + +LVDMY K G
Sbjct: 494 MYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGK 553
Query: 297 IEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXX 356
E A +F S D+ WN+M+G + HG VE++L F+ + G D VTY
Sbjct: 554 YETAETIFSLAS--NPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLL 611
Query: 357 XXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPM-EPT 415
H G + + + + G+ +HY+CMV+++++AG + A + I Q P
Sbjct: 612 AACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQ 671
Query: 416 ASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREA 475
A + LLS C+N RN ++ ++++L+P+ +I LSN+YA RW+D MR
Sbjct: 672 AELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRK 731
Query: 476 MERRGVKKSPGFSSVEI 492
+ K PG S +E+
Sbjct: 732 IRGLASSKDPGLSWIEV 748
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 163/346 (47%), Gaps = 45/346 (13%)
Query: 16 TLLSLLDGCKSMLELK---QLHAILITSGL--SQDEPFISKVLCFSALSNSGDIDYSYRA 70
+++ L C S+ LK Q+HA+++T+G + + P+ + L S G ++ + +
Sbjct: 96 SVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNL-ISMYVRCGSLEQARKV 154
Query: 71 FSQLSSPRIFIWNTIIRGYSNSKNP---IQSLSIFLKMLRHGLAPDYLTYPFLAKASARL 127
F ++ + +N + YS +NP + + M + P+ T+ L + A L
Sbjct: 155 FDKMPHRNVVSYNALYSAYS--RNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVL 212
Query: 128 LNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSML 187
+ G S+++ IIK G+ + +Q S++ MY+S
Sbjct: 213 EDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSS-------------------------- 246
Query: 188 DGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEV 247
CG++ A ++F+ ++ RD +W+++I G +K + + + F M G +
Sbjct: 247 -----CGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQF 301
Query: 248 TMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGV 307
T VL C+ LG+ GK++H I+ + L L +L+DMY CG + EA VF +
Sbjct: 302 TYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRI 361
Query: 308 SKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGI-KADEVTY 352
+++ WN++I G + +G E+++ +++ + + + DE T+
Sbjct: 362 --HNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTF 405
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 30/174 (17%)
Query: 150 FIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSER 209
+ N+LI MY C ++ A KVFD + ++N+V+ + VFE +S
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGL-------------SAVFEYVS-- 67
Query: 210 DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMH 269
SSL +K G ++ M F + + E+T C + L++ + +H
Sbjct: 68 ---MGSSLHSQIIKLGSFQ--MIFFMPLNEIASSVVELTR-----KCVSITVLKRARQIH 117
Query: 270 KYIVDNGLPLTL---VLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAM 320
++ G +L+ MY +CG++E+A VF + R +V+ +NA+
Sbjct: 118 ALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHR--NVVSYNAL 169
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 138/482 (28%), Positives = 229/482 (47%), Gaps = 49/482 (10%)
Query: 79 IFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHA 138
+F W +I G ++ Q+L +F KM G+ P+ +T A + L G VH+
Sbjct: 317 VFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHS 376
Query: 139 HIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVL 198
+K G D + NSL+ MY+ CG + A KVFDSV+ K++ +WNSM+ GY + G
Sbjct: 377 IAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGK 436
Query: 199 AHKVFESMSERDVR----SWSSLIDGYVKAGEYREAMAVFEKMRAVGP------------ 242
A+++F M + ++R +W+++I GY+K G+ EAM +F++M G
Sbjct: 437 AYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLII 496
Query: 243 ------------------------KANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLP 278
N VT++S+L ACA+L + + +H ++ L
Sbjct: 497 AGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLD 556
Query: 279 LTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFK 338
++ +L D YAK G IE + +F G+ + D++ WN++IGG HGS +L LF
Sbjct: 557 AIHAVKNALTDTYAKSGDIEYSRTIFLGMETK--DIITWNSLIGGYVLHGSYGPALALFN 614
Query: 339 DMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESL-DKCGMTPSSEHYACMVDVLARA 397
M+ GI + T G V E F S+ + + P+ EH + MV + RA
Sbjct: 615 QMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRA 674
Query: 398 GQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLS 457
+L A QFI +M ++ + + L+GC H + ++A L LEP++ +S
Sbjct: 675 NRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVS 734
Query: 458 NVYA-GVKRWDDARGMREAMERRG--VKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYS 514
+YA G K R + RR +KK G S +E+ + F D++ ++ Y
Sbjct: 735 QIYALGAKL---GRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYP 791
Query: 515 ML 516
++
Sbjct: 792 LV 793
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 114/459 (24%), Positives = 204/459 (44%), Gaps = 51/459 (11%)
Query: 16 TLLSLLDGC---KSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
T L LL+ C S+ + LHA GL + + S + G I + + F
Sbjct: 83 TYLKLLESCIDSGSIHLGRILHARF---GLFTEPDVFVETKLLSMYAKCGCIADARKVFD 139
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
+ +F W+ +I YS + +F M++ G+ PD +P + + A + E
Sbjct: 140 SMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEA 199
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G +H+ +IK G + NS++ +YA CG + +A K F ++E+++++WNS+L Y +
Sbjct: 200 GKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQ 259
Query: 193 CGEMVLAHKVFESMSER---------------------------------------DVRS 213
G+ A ++ + M + DV +
Sbjct: 260 NGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFT 319
Query: 214 WSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIV 273
W+++I G + G +A+ +F KM G N VT++S + AC+ L + +G +H V
Sbjct: 320 WTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAV 379
Query: 274 DNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEES 333
G +++ SLVDMY+KCG +E+A VF V + DV WN+MI G G ++
Sbjct: 380 KMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK--DVYTWNSMITGYCQAGYCGKA 437
Query: 334 LGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCG-MTPSSEHYACMVD 392
LF MQ ++ + +T+ G EA F+ ++K G + ++ + ++
Sbjct: 438 YELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIA 497
Query: 393 VLARAGQLATAYQFICQMPME---PTASMLGALLSGCIN 428
+ G+ A + +M P + + +LL C N
Sbjct: 498 GYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACAN 536
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 171/368 (46%), Gaps = 57/368 (15%)
Query: 16 TLLSLLDGCKSMLELKQ---LHAILITSGLSQDEPFISKVLCFSAL----SNSGDIDYSY 68
T++S + C + + Q +H+I + G FI VL ++L S G ++ +
Sbjct: 354 TIMSAVSACSCLKVINQGSEVHSIAVKMG------FIDDVLVGNSLVDMYSKCGKLEDAR 407
Query: 69 RAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLL 128
+ F + + ++ WN++I GY + ++ +F +M L P+ +T+ + +
Sbjct: 408 KVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNG 467
Query: 129 NQETGVSVHAHIIKTGH-------------------------------EYDRFIQNS--L 155
++ + + + K G ++ RF+ NS +
Sbjct: 468 DEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTI 527
Query: 156 IHMYASCGNIVWAHKVFD---SVQEKNLVSW----NSMLDGYAKCGEMVLAHKVFESMSE 208
+ + +C N++ A V + V +NL + N++ D YAK G++ + +F M
Sbjct: 528 LSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMET 587
Query: 209 RDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMM 268
+D+ +W+SLI GYV G Y A+A+F +M+ G N T+ S++ A +G +++GK +
Sbjct: 588 KDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKV 647
Query: 269 HKYIVDNGLPLTLVLQ--TSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLAT 326
Y + N + L+ +++V +Y + +EEAL ++ +++ IW + + G
Sbjct: 648 F-YSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNI-QSETPIWESFLTGCRI 705
Query: 327 HGSVEESL 334
HG ++ ++
Sbjct: 706 HGDIDMAI 713
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 13/199 (6%)
Query: 16 TLLSLLDGCKSMLE---LKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
T+LSLL C ++L ++++H ++ L D K + SGDI+YS F
Sbjct: 526 TILSLLPACANLLGAKMVREIHGCVLRRNL--DAIHAVKNALTDTYAKSGDIEYSRTIFL 583
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
+ + I WN++I GY + +L++F +M G+ P+ T + A + N +
Sbjct: 584 GMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDE 643
Query: 133 GVSVHAHIIKTGHEYDRFIQ-NSLIHMYASCGNIVWAHKVFDSVQEKNLVS----WNSML 187
G V I H ++++++Y + + +QE N+ S W S L
Sbjct: 644 GKKVFYSIANDYHIIPALEHCSAMVYLYGRANRL---EEALQFIQEMNIQSETPIWESFL 700
Query: 188 DGYAKCGEMVLAHKVFESM 206
G G++ +A E++
Sbjct: 701 TGCRIHGDIDMAIHAAENL 719
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 235/493 (47%), Gaps = 35/493 (7%)
Query: 17 LLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSS 76
+LSL +S+ KQ+H+ I G +D + L + S + R F + S
Sbjct: 331 ILSLCSAVRSLDFGKQIHSQTIKVGF-EDSTDVGNALVDMYMKCSASEVEASRVFGAMVS 389
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P + W T+I G + + ++M++ + P+ +T + +A ++L + + +
Sbjct: 390 PNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEI 449
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEM 196
HA++++ + + + NSL+ YAS + +A WN
Sbjct: 450 HAYLLRRHVDGEMVVGNSLVDAYASSRKVDYA--------------WN------------ 483
Query: 197 VLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCAC 256
V SM RD +++SL+ + + G++ A++V M G + +++++ + A
Sbjct: 484 -----VIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISAS 538
Query: 257 AHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLI 316
A+LGALE GK +H Y V +G + SLVDMY+KCG++E+A VF ++ DV+
Sbjct: 539 ANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIA--TPDVVS 596
Query: 317 WNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLD 376
WN ++ GLA++G + +L F++M+ + D VT+ +G L +F+ +
Sbjct: 597 WNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMK 656
Query: 377 KC-GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELA 435
K + P EHY +V +L RAG+L A + M ++P A + LL C N L
Sbjct: 657 KIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLG 716
Query: 436 EIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGV 495
E + K + L P YI L+++Y + + A+ R M + + K G S+VE+ G
Sbjct: 717 EDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGK 776
Query: 496 SRRFIAHDKTHSD 508
F++ D T D
Sbjct: 777 VHSFVSEDVTRVD 789
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 207/452 (45%), Gaps = 46/452 (10%)
Query: 4 VSPSFKIANLNQTLLSLLDGCKSMLELKQLH--AILITSGLSQDEPFISKVLCFSALSNS 61
+S + ++ NL ++ + +L C+S LH +I GL ++ + +L S +
Sbjct: 14 LSRTNELGNLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLL--SLYLKT 71
Query: 62 GDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLA 121
I + + F ++S +F W +I ++ S+ +LS+F +M+ G P+ T+ +
Sbjct: 72 DGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVV 131
Query: 122 KASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLV 181
++ A L + G VH +IKTG E + + +SL +Y+ CG A ++F S+Q + +
Sbjct: 132 RSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTI 191
Query: 182 SWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVG 241
SW M I V A ++REA+ + +M G
Sbjct: 192 SWTMM-------------------------------ISSLVGARKWREALQFYSEMVKAG 220
Query: 242 PKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEAL 301
NE T V +L A + LG LE GK +H I+ G+PL +VL+TSLVD Y++ +E+A+
Sbjct: 221 VPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAV 279
Query: 302 LVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXH 361
V + S + DV +W +++ G + +E++G F +M+++G++ + TY
Sbjct: 280 RVLN--SSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSA 337
Query: 362 GGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGA 421
+ K G S++ +VD+ + + + P
Sbjct: 338 VRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTT 397
Query: 422 LLSGCINHRNFE-----LAEIVGRKLIELEPD 448
L+ G ++H + L E+V R E+EP+
Sbjct: 398 LILGLVDHGFVQDCFGLLMEMVKR---EVEPN 426
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 156/340 (45%), Gaps = 40/340 (11%)
Query: 16 TLLSLLDGCKSMLELK---QLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
T S++ C + ++ ++H +I +G + S + S G + FS
Sbjct: 126 TFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSL--SDLYSKCGQFKEACELFS 183
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
L + W +I ++ ++L + +M++ G+ P+ T+ L AS+ L E
Sbjct: 184 SLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASS-FLGLEF 242
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G ++H++II G N+V S++D Y++
Sbjct: 243 GKTIHSNIIVRGIPL-------------------------------NVVLKTSLVDFYSQ 271
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
+M A +V S E+DV W+S++ G+V+ +EA+ F +MR++G + N T ++
Sbjct: 272 FSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAI 331
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIE-EALLVFHGVSKRK 311
L C+ + +L+ GK +H + G + + +LVDMY KC A E EA VF +
Sbjct: 332 LSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMV--S 389
Query: 312 TDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVT 351
+V+ W +I GL HG V++ GL +M ++ + VT
Sbjct: 390 PNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVT 429
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 132/331 (39%), Gaps = 55/331 (16%)
Query: 16 TLLSLLDGCKSMLELK---QLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
TL +L C + ++ ++HA L+ + D + A ++S +DY++
Sbjct: 429 TLSGVLRACSKLRHVRRVLEIHAYLLRRHV--DGEMVVGNSLVDAYASSRKVDYAWNVIR 486
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
+ + +++ ++ +LS+ M G+ D L+ P ASA L ET
Sbjct: 487 SMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALET 546
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G +H + +K+G + NSL+ MY+ CG++ A KVF+ + ++VSWN ++ G A
Sbjct: 547 GKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLAS 606
Query: 193 CGEMVLAHKVFESMS----------------------------------------ERDVR 212
G + A FE M E V
Sbjct: 607 NGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVE 666
Query: 213 SWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYI 272
+ L+ +AG EA V E M K N + ++L AC + G L G+ M
Sbjct: 667 HYVHLVGILGRAGRLEEATGVVETMHL---KPNAMIFKTLLRACRYRGNLSLGEDM---- 719
Query: 273 VDNGL---PLTLVLQTSLVDMYAKCGAIEEA 300
+ GL P L L D+Y + G E A
Sbjct: 720 ANKGLALAPSDPALYILLADLYDESGKPELA 750
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 141/488 (28%), Positives = 230/488 (47%), Gaps = 63/488 (12%)
Query: 16 TLLSLLDGCKSMLELK---QLHAILITSGLSQDEPFISKVLCFSALS------NSGDIDY 66
+ + L+ C +K QLH +++ GL CF + S G I
Sbjct: 144 SFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESS--------CFPSTSLVHFYGKCGLIVE 195
Query: 67 SYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKML---RHGLAPDYLTYPFLAKA 123
+ R F + + +WN ++ Y + ++ + LK++ ++ DY T+ L A
Sbjct: 196 ARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGL-LKLMGSDKNRFRGDYFTFSSLLSA 254
Query: 124 SARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSW 183
R+ E G +HA + K +++D + +L++MYA
Sbjct: 255 -CRI---EQGKQIHAILFKVSYQFDIPVATALLNMYA----------------------- 287
Query: 184 NSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPK 243
K + A + FESM R+V SW+++I G+ + GE REAM +F +M +
Sbjct: 288 --------KSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQ 339
Query: 244 ANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLV 303
+E+T SVL +CA A+ + K + + G L + SL+ Y++ G + EALL
Sbjct: 340 PDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLC 399
Query: 304 FHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGG 363
FH + R+ D++ W ++IG LA+HG EESL +F+ M ++ D++T+ HGG
Sbjct: 400 FHSI--REPDLVSWTSVIGALASHGFAEESLQMFESMLQ-KLQPDKITFLEVLSACSHGG 456
Query: 364 LVKEAWHFFESLDKC-GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGAL 422
LV+E F+ + + + EHY C++D+L RAG + A + MP EP+ L A
Sbjct: 457 LVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAF 516
Query: 423 LSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGV- 481
GC H E + +KL+E+EP Y LSN Y W+ A +R+ ERR
Sbjct: 517 TGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKR-ERRNCY 575
Query: 482 -KKSPGFS 488
K+PG S
Sbjct: 576 NPKTPGCS 583
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 128/322 (39%), Gaps = 49/322 (15%)
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEM 196
H ++K G F+QN L+ Y A K+FD + +N+V+WN
Sbjct: 59 HGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWN------------ 106
Query: 197 VLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCAC 256
+L H V + + + R+ ++ + V+ + ++ C
Sbjct: 107 ILIHGVIQRDGDTNHRA--------------HLGFCYLSRILFTDVSLDHVSFMGLIRLC 152
Query: 257 AHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLI 316
++ G +H +V GL + TSLV Y KCG I EA VF V R D+++
Sbjct: 153 TDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDR--DLVL 210
Query: 317 WNAMIGGLATHGSVEESLGLFKDMQAVG--IKADEVTYXXXXXX-------XXHGGLVKE 367
WNA++ +G ++E+ GL K M + + D T+ H L K
Sbjct: 211 WNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHAILFKV 270
Query: 368 AWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCI 427
++ F P + ++++ A++ L+ A + M + S ++
Sbjct: 271 SYQF--------DIPVA---TALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQ 319
Query: 428 NHRNFELAEIVGRKLIE-LEPD 448
N E + G+ L+E L+PD
Sbjct: 320 NGEGREAMRLFGQMLLENLQPD 341
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 211/465 (45%), Gaps = 37/465 (7%)
Query: 62 GDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLA 121
G +D + + F Q+ + W T+I G ++ ++L +F MLR + + +
Sbjct: 173 GKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVI 232
Query: 122 KASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLV 181
A A G+ VH IIK G Y+ ++ SLI YA+C I
Sbjct: 233 TACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRI---------------- 276
Query: 182 SWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVG 241
G+ + KVF+ V W++L+ GY ++ +A+++F M
Sbjct: 277 ------------GD---SRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNS 321
Query: 242 PKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEAL 301
N+ T S L +C+ LG L+ GK MH V GL + SLV MY+ G + +A+
Sbjct: 322 ILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAV 381
Query: 302 LVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXH 361
VF + K+ ++ WN++I G A HG + + +F M + + DE+T+ H
Sbjct: 382 SVFIKIFKK--SIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSH 439
Query: 362 GGLVKEAWHFFESLDK--CGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASML 419
G +++ F + + +HY CMVD+L R G+L A + I +M ++P +
Sbjct: 440 CGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVW 499
Query: 420 GALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERR 479
ALLS C H + + E + L+ Y+ LSN+YA RW + +R M++
Sbjct: 500 LALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKN 559
Query: 480 GVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
G+ K PG S V I G F + D+ H Y L F+ ++K
Sbjct: 560 GIMKKPGSSWVVIRGKKHEFFSGDQPH--CSRIYEKLEFLREKLK 602
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 145/303 (47%), Gaps = 36/303 (11%)
Query: 32 QLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSN 91
Q+H ++I G +E + ++ F A N I S + F + ++ +W ++ GYS
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYA--NCKRIGDSRKVFDEKVHEQVAVWTALLSGYSL 303
Query: 92 SKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFI 151
+K +LSIF MLR+ + P+ T+ + + L + G +H +K G E D F+
Sbjct: 304 NKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFV 363
Query: 152 QNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDV 211
NSL+ MY+ GN+ A VF + +K++VSWNS++ G A+ G
Sbjct: 364 GNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGR---------------- 407
Query: 212 RSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKY 271
G++ A +F +M + + +E+T +L AC+H G LEKG+ + Y
Sbjct: 408 -------------GKW--AFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYY 452
Query: 272 IVD--NGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGS 329
+ N + + T +VD+ +CG ++EA + + + + ++W A++ H
Sbjct: 453 MSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNE-MVWLALLSACRMHSD 511
Query: 330 VEE 332
V+
Sbjct: 512 VDR 514
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 173/396 (43%), Gaps = 25/396 (6%)
Query: 61 SGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFL 120
S ID + F+Q+ SP + ++ +I GY+ S + +L++F +M D +++ +
Sbjct: 48 SRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMP----VRDVVSWNSM 103
Query: 121 AKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIH---MYASC---GNIVWAHKVFDS 174
+ T V + +D + S++ M C G + A ++F
Sbjct: 104 ISGCVECGDMNTAVKL----------FDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQ 153
Query: 175 VQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVF 234
+ K+ +WNSM+ GY + G++ A K+F+ M ++V SW+++I G + EA+ +F
Sbjct: 154 MPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLF 213
Query: 235 EKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKC 294
+ M K+ V+ ACA+ A G +H I+ G + SL+ YA C
Sbjct: 214 KNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANC 273
Query: 295 GAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXX 354
I ++ VF K V +W A++ G + + E++L +F M I ++ T+
Sbjct: 274 KRIGDSRKVFD--EKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFAS 331
Query: 355 XXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEP 414
G + K G+ + +V + + +G + A ++ +
Sbjct: 332 GLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKS 391
Query: 415 TASMLGALLSGCINHRNFELAEIVGRKLIEL--EPD 448
S +++ GC H + A ++ ++I L EPD
Sbjct: 392 IVS-WNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPD 426
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 136/462 (29%), Positives = 218/462 (47%), Gaps = 41/462 (8%)
Query: 33 LHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNS 92
LH +++ G+ D ++ ++C A S G + + R ++ I +I+ Y+
Sbjct: 268 LHCLVVKCGMVNDISVVTSLVC--AYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEK 325
Query: 93 KNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQ 152
+ ++ F K + + D + + + + + G+S+H + IK+G +
Sbjct: 326 GDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVV 385
Query: 153 NSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVR 212
N LI MY+ FD V E VL +FE + E +
Sbjct: 386 NGLITMYSK----------FDDV-------------------ETVLF--LFEQLQETPLI 414
Query: 213 SWSSLIDGYVKAGEYREAMAVFEKMRAVG---PKANEVTMVSVLCACAHLGALEKGKMMH 269
SW+S+I G V++G A VF +M G P A +T+ S+L C+ L L GK +H
Sbjct: 415 SWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDA--ITIASLLAGCSQLCCLNLGKELH 472
Query: 270 KYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGS 329
Y + N + T+L+DMYAKCG +A VF + T WN+MI G + G
Sbjct: 473 GYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTAT--WNSMISGYSLSGL 530
Query: 330 VEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDK-CGMTPSSEHYA 388
+L + +M+ G+K DE+T+ HGG V E F ++ K G++P+ +HYA
Sbjct: 531 QHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYA 590
Query: 389 CMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPD 448
MV +L RA A I +M ++P +++ GALLS CI HR E+ E V RK+ L+
Sbjct: 591 LMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYK 650
Query: 449 HDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSV 490
+ G Y+ +SN+YA WDD +R M+ G G S +
Sbjct: 651 NGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 141/320 (44%), Gaps = 39/320 (12%)
Query: 17 LLSLLDGCKSMLELK---QLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQ 73
L+ +L GCK + LH I SGL ++ ++ + S D++ F Q
Sbjct: 350 LVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLI--TMYSKFDDVETVLFLFEQ 407
Query: 74 LSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKM-LRHGLAPDYLTYPFLAKASARLLNQET 132
L + WN++I G S + +F +M L GL PD +T L ++L
Sbjct: 408 LQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNL 467
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G +H + ++ E + F+ +LI MYA CGN V A VF S++ +WNSM+ GY+
Sbjct: 468 GKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSL 527
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
G L H+ A++ + +MR G K +E+T + V
Sbjct: 528 SG---LQHR----------------------------ALSCYLEMREKGLKPDEITFLGV 556
Query: 253 LCACAHLGALEKGKMMHKYIVDN-GLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRK 311
L AC H G +++GK+ + ++ G+ TL +V + + EAL + + K
Sbjct: 557 LSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDI-K 615
Query: 312 TDVLIWNAMIGGLATHGSVE 331
D +W A++ H +E
Sbjct: 616 PDSAVWGALLSACIIHRELE 635
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 138/314 (43%), Gaps = 44/314 (14%)
Query: 92 SKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLN--QETGVSVHAHIIKTGHEYDR 149
S +PI +IF +LR L P++ T +A+ N + V H+ K+G +
Sbjct: 29 SSSPI---TIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFV 85
Query: 150 FIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSER 209
+++ SL+++Y G + A +FD + E++ V WN+++ GY++ G A K+F M ++
Sbjct: 86 YVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQ 145
Query: 210 DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMH 269
G + T+V++L C G + +G+ +H
Sbjct: 146 -------------------------------GFSPSATTLVNLLPFCGQCGFVSQGRSVH 174
Query: 270 KYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGS 329
+GL L ++ +L+ Y+KC + A ++F + + T + WN MIG + G
Sbjct: 175 GVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKST--VSWNTMIGAYSQSGL 232
Query: 330 VEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYAC 389
EE++ +FK+M ++ VT + E H + KCGM
Sbjct: 233 QEEAITVFKNMFEKNVEISPVT----IINLLSAHVSHEPLHCL--VVKCGMVNDISVVTS 286
Query: 390 MVDVLARAGQLATA 403
+V +R G L +A
Sbjct: 287 LVCAYSRCGCLVSA 300
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 176/406 (43%), Gaps = 20/406 (4%)
Query: 28 LELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIR 87
L+++Q+ L SGL D K + G + + F ++ +WN +I
Sbjct: 67 LQVEQVQTHLTKSGL--DRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALIC 124
Query: 88 GYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEY 147
GYS + + +F+ ML+ G +P T L + G SVH K+G E
Sbjct: 125 GYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLEL 184
Query: 148 DRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMS 207
D ++N+LI Y+ C + A +F +++K+ VSWN+M+ Y++ G A VF++M
Sbjct: 185 DSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMF 244
Query: 208 ERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMV-SVLCACAHLGALEKGK 266
E++V I + A E + + N++++V S++CA + G L +
Sbjct: 245 EKNVEISPVTIINLLSAHVSHEPLHC---LVVKCGMVNDISVVTSLVCAYSRCGCLVSAE 301
Query: 267 MMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSK--RKTDVLIWNAMIGGL 324
++ + ++V TS+V YA+ G ++ A++ F + K D + ++ G
Sbjct: 302 RLYASAKQD----SIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGC 357
Query: 325 ATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSS 384
++ + L G+ + V+ FE L + TP
Sbjct: 358 KKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQE---TPLI 414
Query: 385 EHYACMVDVLARAGQLATAYQFICQMPME----PTASMLGALLSGC 426
+ ++ ++G+ +TA++ QM + P A + +LL+GC
Sbjct: 415 S-WNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGC 459
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 16 TLLSLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
T+ SLL GC + L K+LH + + ++E F+ L + G+ + F
Sbjct: 451 TIASLLAGCSQLCCLNLGKELHGYTLRNNF-ENENFVCTAL-IDMYAKCGNEVQAESVFK 508
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTY 117
+ +P WN++I GYS S ++LS +L+M GL PD +T+
Sbjct: 509 SIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITF 553
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/481 (28%), Positives = 233/481 (48%), Gaps = 44/481 (9%)
Query: 19 SLLDGCKSMLELK---QLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLS 75
S+L CK + LK Q+H + + + I + S + G ++ + F +
Sbjct: 118 SVLKSCKDLGCLKEGMQIHGSVEKGNCAGN--LIVRSALLSLYARCGKMEEARLQFDSMK 175
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVS 135
+ WN +I GY+ + S S+F ML G PD T+ L +AS + E
Sbjct: 176 ERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSE 235
Query: 136 VHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGE 195
+H IK G + R ++LI S+++ Y KCG
Sbjct: 236 LHGLAIKLG--FGR--SSALIR---------------------------SLVNAYVKCGS 264
Query: 196 MVLAHKVFESMSERDVRSWSSLIDGYVKAGE-YREAMAVFEKMRAVGPKANEVTMVSVLC 254
+ A K+ E +RD+ S ++LI G+ + +A +F+ M + K +EV + S+L
Sbjct: 265 LANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLK 324
Query: 255 ACAHLGALEKGKMMHKYIVDNG-LPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTD 313
C + ++ G+ +H + + + + + L SL+DMYAK G IE+A+L F + ++ D
Sbjct: 325 ICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEK--D 382
Query: 314 VLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFE 373
V W ++I G HG+ E+++ L+ M+ IK ++VT+ H G + W ++
Sbjct: 383 VRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYD 442
Query: 374 SL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMP--MEPTASMLGALLSGCINHR 430
++ +K G+ EH +C++D+LAR+G L AY I + ++S GA L C H
Sbjct: 443 TMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHG 502
Query: 431 NFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRG-VKKSPGFSS 489
N +L+++ +L+ +EP YI L++VYA WD+A R+ M+ G K+PG+S
Sbjct: 503 NVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSL 562
Query: 490 V 490
V
Sbjct: 563 V 563
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 121/232 (52%), Gaps = 10/232 (4%)
Query: 179 NLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMR 238
NL + ++D Y K G++ A K+F+ +S+RDV SW+++I + + G + +A+ +F++M
Sbjct: 46 NLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMH 105
Query: 239 AVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIE 298
KAN+ T SVL +C LG L++G +H + L+++++L+ +YA+CG +E
Sbjct: 106 REDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKME 165
Query: 299 EALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXX 358
EA L F + +R D++ WNAMI G + + S LF+ M G K D T+
Sbjct: 166 EARLQFDSMKER--DLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTF----GS 219
Query: 359 XXHGGLVKEAWHFFESLD----KCGMTPSSEHYACMVDVLARAGQLATAYQF 406
+V + L K G SS +V+ + G LA A++
Sbjct: 220 LLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKL 271
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 142/323 (43%), Gaps = 36/323 (11%)
Query: 29 ELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRG 88
+L +H IT+G + K + GD+ ++ + F ++S + W +I
Sbjct: 30 QLLLIHGNSITNGFCSNLQL--KDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISR 87
Query: 89 YSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYD 148
+S +L +F +M R + + TY + K+ L + G+ +H + K
Sbjct: 88 FSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEK------ 141
Query: 149 RFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSE 208
GN NL+ +++L YA+CG+M A F+SM E
Sbjct: 142 --------------GNCA-----------GNLIVRSALLSLYARCGKMEEARLQFDSMKE 176
Query: 209 RDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMM 268
RD+ SW+++IDGY + ++F+ M G K + T S+L A + LE +
Sbjct: 177 RDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSEL 236
Query: 269 HKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHG 328
H + G + L SLV+ Y KCG++ A + G KR D+L A+I G +
Sbjct: 237 HGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKR--DLLSCTALITGFSQQN 294
Query: 329 S-VEESLGLFKDMQAVGIKADEV 350
+ ++ +FKDM + K DEV
Sbjct: 295 NCTSDAFDIFKDMIRMKTKMDEV 317
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Query: 256 CAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVL 315
C++ ++ ++H + NG L L+ L+D+Y K G ++ A +F +SKR DV+
Sbjct: 22 CSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKR--DVV 79
Query: 316 IWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESL 375
W AMI + G ++L LFK+M +KA++ TY G +KE S+
Sbjct: 80 SWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSV 139
Query: 376 DKCGMTPSSEHYACMVDVLARAGQLATA 403
+K + + ++ + AR G++ A
Sbjct: 140 EKGNCAGNLIVRSALLSLYARCGKMEEA 167
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/473 (28%), Positives = 228/473 (48%), Gaps = 46/473 (9%)
Query: 26 SMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPR-IFIWNT 84
S L + AIL + S F V C+ L GD+ ++ +S R + WN+
Sbjct: 493 SKFSLSTVLAILTSCDSSDSLIFGKSVHCW--LQKLGDLTSAFLRLETMSETRDLTSWNS 550
Query: 85 IIRGYSNSKNPIQSLSIFLKMLRHG-LAPDYLTYPFLAKASARLLNQETGVSVHAHIIKT 143
+I G ++S + ++SL F M R G + D +T AS L G H IK+
Sbjct: 551 VISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKS 610
Query: 144 GHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVF 203
E D +QN+LI MY +C ++ A KVF
Sbjct: 611 LRELDTQLQNTLITMYG-------------------------------RCKDIESAVKVF 639
Query: 204 ESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALE 263
+S+ ++ SW+ +I + RE VF+ R + + NE+T V +L A LG+
Sbjct: 640 GLISDPNLCSWNCVISALSQNKAGRE---VFQLFRNLKLEPNEITFVGLLSASTQLGSTS 696
Query: 264 KGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFH--GVSKRKTDVLIWNAMI 321
G H +++ G + +LVDMY+ CG +E + VF GV+ + WN++I
Sbjct: 697 YGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVN----SISAWNSVI 752
Query: 322 GGLATHGSVEESLGLFKDMQAVG-IKADEVTYXXXXXXXXHGGLVKEAWHFFESLD-KCG 379
HG E+++ LFK++ + ++ ++ ++ H G + E +++ ++ K G
Sbjct: 753 SAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFG 812
Query: 380 MTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVG 439
+ P +EH +VD+L RAG+L AY+FI + A + GALLS C H + +L + V
Sbjct: 813 VKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVA 872
Query: 440 RKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEI 492
L E+EPD+ YI L+N Y G+ W++A +R+ +E +KK PG+S +++
Sbjct: 873 EVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/450 (22%), Positives = 184/450 (40%), Gaps = 65/450 (14%)
Query: 16 TLLSLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
T ++ C S+ EL + LH ++I SG S + S S GD + + F
Sbjct: 291 TFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFE 350
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLR-HGLAPDYLTYPFLAKASARLLNQE 131
+L + N I+ G++ + ++ I +M + PD T + L
Sbjct: 351 ELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSR 410
Query: 132 TGVSVHAHIIKTGHEYDRF-IQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGY 190
G +VH + ++ + + NS+I MY CG A +F + ++LVSWNSM+ +
Sbjct: 411 EGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAF 470
Query: 191 A-----------------------------------------------------KCGEMV 197
+ K G++
Sbjct: 471 SQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLT 530
Query: 198 LAHKVFESMSE-RDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGP-KANEVTMVSVLCA 255
A E+MSE RD+ SW+S+I G +G + E++ F+ M G + + +T++ + A
Sbjct: 531 SAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISA 590
Query: 256 CAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVL 315
+LG + +G+ H + + L LQ +L+ MY +C IE A+ VF +S ++
Sbjct: 591 SGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLIS--DPNLC 648
Query: 316 IWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESL 375
WN +I L+ + + E LF++++ ++ +E+T+ G L
Sbjct: 649 SWNCVISALSQNKAGREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGMQAHCHL 705
Query: 376 DKCGMTPSSEHYACMVDVLARAGQLATAYQ 405
+ G + A +VD+ + G L T +
Sbjct: 706 IRRGFQANPFVSAALVDMYSSCGMLETGMK 735
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 149/315 (47%), Gaps = 37/315 (11%)
Query: 31 KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYS 90
+ +H + GL QD SK+L F +G++ S F +L + +WN++I +
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTF--YGRTGELVSSSCLFDELKEKDVIVWNSMITALN 164
Query: 91 NSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRF 150
+ I ++ +F++M+ G D T A A + L +H I+TG D
Sbjct: 165 QNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSS 224
Query: 151 IQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERD 210
+ N+L+++YA N+ A VF ++ +++VSWN+++ KC
Sbjct: 225 LCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIM---TKC----------------- 264
Query: 211 VRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHK 270
+ G R+++ F+ M G +A+ VT V+ AC+ + L G+ +H
Sbjct: 265 -----------LANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHG 313
Query: 271 YIVDNGL-PLTLV-LQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHG 328
++ +G P V + S++ MY+KCG E A VF + R DV+ NA++ G A +G
Sbjct: 314 LVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCR--DVISSNAILNGFAANG 371
Query: 329 SVEESLGLFKDMQAV 343
EE+ G+ MQ+V
Sbjct: 372 MFEEAFGILNQMQSV 386
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 132/508 (25%), Positives = 232/508 (45%), Gaps = 48/508 (9%)
Query: 17 LLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVL-----CFSALSNSGDIDYSYRAF 71
+LS+ D + L K +HA+ I SG ++ +K++ C ++S G F
Sbjct: 161 VLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRG-------VF 213
Query: 72 SQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTY-PFLAKASARLLNQ 130
+S + +I G ++ L +F M R + P+ +TY LA S
Sbjct: 214 DGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGS---- 269
Query: 131 ETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGY 190
R ++ IH ++W + + E L ++++D Y
Sbjct: 270 -----------------QRIVEGQQIHA------LLWKYGI-----ESELCIESALMDMY 301
Query: 191 AKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMV 250
+KCG + A +FES +E D S + ++ G + G EA+ F +M G + + +
Sbjct: 302 SKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVS 361
Query: 251 SVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR 310
+VL +L GK +H ++ + L++MY+KCG + ++ VF + KR
Sbjct: 362 AVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKR 421
Query: 311 KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWH 370
+ + WN+MI A HG +L L+++M + +K +VT+ H GL+ +
Sbjct: 422 --NYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRE 479
Query: 371 FFESLDKC-GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINH 429
+ + G+ P +EHY C++D+L RAG L A FI +P++P + ALL C H
Sbjct: 480 LLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFH 539
Query: 430 RNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSS 489
+ E+ E +L + PD +I ++N+Y+ +W + + M+ GV K G SS
Sbjct: 540 GDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISS 599
Query: 490 VEICGVSRRFIAHDKTHSDSEETYSMLN 517
+EI + F+ DK H +E Y +L+
Sbjct: 600 IEIEHKTHSFVVEDKLHPQAEAIYDVLS 627
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 3/230 (1%)
Query: 175 VQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVF 234
+ LV WNS+L YAKCG++V A K+F+ M RDV S + + G+++ E +
Sbjct: 85 IHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLL 144
Query: 235 EKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKC 294
++M G + T+ VL C KM+H + +G + + L+ Y KC
Sbjct: 145 KRMLGSG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKC 203
Query: 295 GAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXX 354
G VF G+S R +V+ A+I GL + E+ L LF M+ + + VTY
Sbjct: 204 GCSVSGRGVFDGMSHR--NVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLS 261
Query: 355 XXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAY 404
+ E L K G+ + ++D+ ++ G + A+
Sbjct: 262 ALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAW 311
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 110/344 (31%), Positives = 184/344 (53%), Gaps = 8/344 (2%)
Query: 49 ISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRH 108
+S + + + D++ + + F ++ + WN ++ GY+ + +L +F MLR
Sbjct: 199 VSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRL 258
Query: 109 GLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWA 168
G+ P+ T+ + A + + S+ I + + F++ +L+ M+A C +I A
Sbjct: 259 GVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSA 318
Query: 169 HKVFDSV-QEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEY 227
++F+ + ++NLV+WN+M+ GY + G+M A ++F++M +R+V SW+SLI GY G+
Sbjct: 319 RRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQA 378
Query: 228 REAMAVFEKMRAVG-PKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTS 286
A+ FE M G K +EVTM+SVL AC H+ LE G + YI N + L S
Sbjct: 379 ALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRS 438
Query: 287 LVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIK 346
L+ MYA+ G + EA VF + +R DV+ +N + A +G E+L L M+ GI+
Sbjct: 439 LIFMYARGGNLWEAKRVFDEMKER--DVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIE 496
Query: 347 ADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACM 390
D VTY GL+KE F+S+ P ++HYACM
Sbjct: 497 PDRVTYTSVLTACNRAGLLKEGQRIFKSI----RNPLADHYACM 536
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 190/406 (46%), Gaps = 47/406 (11%)
Query: 29 ELKQLHAILIT-SGLSQDEPFISKVL-CFSALSNSGDIDYSYRAFSQLSSPRIFIWNTII 86
+L Q+HA LI + L + + S+++ C + L Y+ F ++ P +F+ N++
Sbjct: 21 QLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSY--YTRLIFDSVTFPNVFVVNSMF 78
Query: 87 RGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHE 146
+ +S L ++ + R G+ PD ++P + K++ R G+ A + K G
Sbjct: 79 KYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRF-----GILFQALVEKLGFF 133
Query: 147 YDRFIQNSLIHMYASCGNIVWAHKVFDSVQ------------------------------ 176
D +++N ++ MY ++ A KVFD +
Sbjct: 134 KDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMM 193
Query: 177 -EKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFE 235
E ++VSW M+ G+AK ++ A K F+ M E+ V SW++++ GY + G +A+ +F
Sbjct: 194 PENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFN 253
Query: 236 KMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCG 295
M +G + NE T V V+ AC+ + + K I + + L ++T+L+DM+AKC
Sbjct: 254 DMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCR 313
Query: 296 AIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXX 355
I+ A +F+ + ++ +++ WNAMI G G + + LF M K + V++
Sbjct: 314 DIQSARRIFNELGTQR-NLVTWNAMISGYTRIGDMSSARQLFDTMP----KRNVVSWNSL 368
Query: 356 XXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLA 401
H G A FFE + G + E M+ VL+ G +A
Sbjct: 369 IAGYAHNGQAALAIEFFEDMIDYGDSKPDE--VTMISVLSACGHMA 412
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 188 bits (478), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 134/477 (28%), Positives = 224/477 (46%), Gaps = 40/477 (8%)
Query: 16 TLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLS 75
T +S++ C Q+H + I +G + +S + S+ D +++ F L
Sbjct: 293 TFVSVMGSCSCAAMGHQVHGLAIKTGY-EKYTLVSNA-TMTMYSSFEDFGAAHKVFESLE 350
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVS 135
+ WNT+I Y+ +K ++S++ +M G+ PD T+ L S L+ +
Sbjct: 351 EKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATS---LDLDVLEM 407
Query: 136 VHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGE 195
V A IIK G I N+LI Y+ G I A +F+ KNL+SWN+++ G+ G
Sbjct: 408 VQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGF 467
Query: 196 MVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCA 255
+ F + E +VR L D Y T+ ++L
Sbjct: 468 PFEGLERFSCLLESEVR---ILPDAY--------------------------TLSTLLSI 498
Query: 256 CAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVL 315
C +L G H Y++ +G ++ +L++MY++CG I+ +L VF+ +S++ DV+
Sbjct: 499 CVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEK--DVV 556
Query: 316 IWNAMIGGLATHGSVEESLGLFKDMQAVG-IKADEVTYXXXXXXXXHGGLVKEAWHFFES 374
WN++I + HG E ++ +K MQ G + D T+ H GLV+E F S
Sbjct: 557 SWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNS 616
Query: 375 LDKC-GMTPSSEHYACMVDVLARAGQLATAYQF--ICQMPMEPTASMLGALLSGCINHRN 431
+ + G+ + +H++C+VD+L RAG L A I + + + AL S C H +
Sbjct: 617 MVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGD 676
Query: 432 FELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFS 488
+L ++V + L+E E D Y+ LSN+YAG W +A R A+ G K G S
Sbjct: 677 LKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCS 733
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 139/280 (49%), Gaps = 4/280 (1%)
Query: 75 SSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLR-HGLAPDYLTYPFLAKASARLLNQETG 133
+S + N + G + S +L +F + R L PD + + L + G
Sbjct: 17 NSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFG 76
Query: 134 VSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKC 193
VH + I++G + N+L+ +Y GN+ K FD + E ++ SW ++L K
Sbjct: 77 GQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKL 136
Query: 194 GEMVLAHKVFESMSER-DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
G++ A +VF+ M ER DV W+++I G ++G + ++ +F +M +G + ++ ++
Sbjct: 137 GDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATI 196
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT 312
L C + G+L+ GK +H ++ G + + +L+ MY C + +A LVF
Sbjct: 197 LSMCDY-GSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVR 255
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
D + +N +I GLA +ESL +F+ M ++ ++T+
Sbjct: 256 DQVTFNVVIDGLAGFKR-DESLLVFRKMLEASLRPTDLTF 294
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 150/337 (44%), Gaps = 50/337 (14%)
Query: 3 GVSPS-FKIANLNQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNS 61
GV P F +L T L L +LE+ Q A +I GLS IS L SA S +
Sbjct: 384 GVKPDEFTFGSLLATSLDL-----DVLEMVQ--ACIIKFGLSSKIE-ISNAL-ISAYSKN 434
Query: 62 GDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHG--LAPDYLTYPF 119
G I+ + F + + WN II G+ ++ P + L F +L + PD T
Sbjct: 435 GQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLST 494
Query: 120 LAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKN 179
L + G HA++++ G + I N+LI+MY+
Sbjct: 495 LLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYS------------------- 535
Query: 180 LVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRA 239
+CG + + +VF MSE+DV SW+SLI Y + GE A+ ++ M+
Sbjct: 536 ------------QCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQD 583
Query: 240 VG---PKANEVTMVSVLCACAHLGALEKGKMMHKYIVD-NGLPLTLVLQTSLVDMYAKCG 295
G P A T +VL AC+H G +E+G + +V+ +G+ + + LVD+ + G
Sbjct: 584 EGKVIPDA--ATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAG 641
Query: 296 AIEEA-LLVFHGVSKRKTDVLIWNAMIGGLATHGSVE 331
++EA LV + V +W A+ A HG ++
Sbjct: 642 HLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLK 678
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 154/348 (44%), Gaps = 53/348 (15%)
Query: 11 ANLNQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFI-SKVLCFSALSNSGDIDYSYR 69
++++ TLLSL + ++ LK+ + DEP + S SA GDI+Y++
Sbjct: 92 SHVSNTLLSLYERLGNLASLKKKFDEI-------DEPDVYSWTTLLSASFKLGDIEYAFE 144
Query: 70 AFSQL-SSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLL 128
F ++ + IWN +I G S S+ +F +M + G+ D + + +
Sbjct: 145 VFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATIL-SMCDYG 203
Query: 129 NQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFD--SVQEKNLVSWNSM 186
+ + G VH+ +IK G + N+LI MY +C +V A VF+ V ++ V++N +
Sbjct: 204 SLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVV 263
Query: 187 LDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANE 246
+DG A +RD E++ VF KM + +
Sbjct: 264 IDGLAGF--------------KRD------------------ESLLVFRKMLEASLRPTD 291
Query: 247 VTMVSVL--CACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVF 304
+T VSV+ C+CA + G +H + G ++ + + MY+ A VF
Sbjct: 292 LTFVSVMGSCSCAAM-----GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVF 346
Query: 305 HGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
+ ++ D++ WN MI + ++ ++K M +G+K DE T+
Sbjct: 347 ESLEEK--DLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTF 392
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 134/473 (28%), Positives = 215/473 (45%), Gaps = 30/473 (6%)
Query: 69 RAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKAS---- 124
R F ++ WN +I Y++ ++ +F KM G+ +T+ ++
Sbjct: 200 RLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTG 259
Query: 125 ---------ARLLNQETGVSVHAHII--KTGHEYDRFIQNSLIHMYASCGNIVWAHKVFD 173
+R+ N T + A II K IH A H +D
Sbjct: 260 NYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLA-------IHSSYD 312
Query: 174 SVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAV 233
+ N+++ Y+KC ++ A VF E + +W+S+I GY + + EA +
Sbjct: 313 GIDNVR----NTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHL 368
Query: 234 FEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNG-LPLTLVLQTSLVDMYA 292
+M G + N +T+ S+L CA + L+ GK H YI+ +L SLVD+YA
Sbjct: 369 LREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYA 428
Query: 293 KCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
K G I A V +SKR D + + ++I G G +L LFK+M GIK D VT
Sbjct: 429 KSGKIVAAKQVSDLMSKR--DEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTV 486
Query: 353 XXXXXXXXHGGLVKEAWHFFESLD-KCGMTPSSEHYACMVDVLARAGQLATAYQFICQMP 411
H LV E F + + G+ P +H++CMVD+ RAG LA A I MP
Sbjct: 487 VAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMP 546
Query: 412 MEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARG 471
+P+ + LL+ C H N ++ + KL+E++P++ G Y+ ++N+YA W
Sbjct: 547 YKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAE 606
Query: 472 MREAMERRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQMK 524
+R M GVKK PG + ++ F D + ++ TY +L+ + MK
Sbjct: 607 VRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMK 659
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 192/400 (48%), Gaps = 22/400 (5%)
Query: 19 SLLDGC---KSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLS 75
SLL C ++ L Q+HA I+SG+ + K++ F + N + S S +
Sbjct: 48 SLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDIL 107
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVS 135
P WN +I Y+ ++ + ++ + +M+ G+ PD TYP + KA L+ G
Sbjct: 108 HP--LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRV 165
Query: 136 VHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGE 195
VH I + ++ ++ N+LI MY N+ A ++FD + E++ VSWN++++ YA G
Sbjct: 166 VHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGM 225
Query: 196 MVLAHKVFESM----SERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVS 251
A ++F+ M E V +W+ + G ++ G Y A+ + +MR + V M+
Sbjct: 226 WSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMII 285
Query: 252 VLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRK 311
L AC+ +GA+ GK +H + + ++ +L+ MY+KC + AL+VF +
Sbjct: 286 GLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFR--QTEE 343
Query: 312 TDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYX------XXXXXXXHGGLV 365
+ WN++I G A EE+ L ++M G + + +T HG
Sbjct: 344 NSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHG--- 400
Query: 366 KEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQ 405
+ +H + KC + + +VDV A++G++ A Q
Sbjct: 401 -KEFHCYILRRKC-FKDYTMLWNSLVDVYAKSGKIVAAKQ 438
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 138/303 (45%), Gaps = 36/303 (11%)
Query: 31 KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYS 90
K++H + I S S D + + S D+ ++ F Q + WN+II GY+
Sbjct: 300 KEIHGLAIHS--SYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYA 357
Query: 91 NSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYD-R 149
++ + +ML G P+ +T + AR+ N + G H +I++ D
Sbjct: 358 QLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYT 417
Query: 150 FIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSER 209
+ NSL+ +YA G IV A +V D + +++ V++ S++DGY GE
Sbjct: 418 MLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGE-------------- 463
Query: 210 DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKG-KMM 268
G V A+A+F++M G K + VT+V+VL AC+H + +G ++
Sbjct: 464 ----------GGV-------ALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLF 506
Query: 269 HKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHG 328
K + G+ L + +VD+Y + G + +A + H + + + W ++ HG
Sbjct: 507 MKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGA-TWATLLNACHIHG 565
Query: 329 SVE 331
+ +
Sbjct: 566 NTQ 568
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 133/498 (26%), Positives = 240/498 (48%), Gaps = 41/498 (8%)
Query: 31 KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYS 90
+QLH + G + + ++ F S+S ++ +++ F ++ P + WN+++ GY
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDS--LEDAHKVFDEMPDPDVISWNSLVSGYV 132
Query: 91 NSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEY-DR 149
S + + +FL++ R + P+ ++ A ARL G +H+ ++K G E +
Sbjct: 133 QSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNV 192
Query: 150 FIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNS------------------------ 185
+ N LI MY CG + A VF ++EK+ VSWN+
Sbjct: 193 VVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNP 252
Query: 186 -------MLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMR 238
++D + K G+ A +V M + SW++++ GYV + + EA F KM
Sbjct: 253 DTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMH 312
Query: 239 AVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIE 298
+ G + +E ++ VL A A L + G ++H GL +V+ ++L+DMY+KCG ++
Sbjct: 313 SSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLK 372
Query: 299 EALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDM-QAVGIKADEVTYXXXXX 357
A L+F + ++ ++++WN MI G A +G E++ LF + Q +K D T+
Sbjct: 373 HAELMFWTMPRK--NLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLA 430
Query: 358 XXXHGGLVKEAW--HFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPT 415
H + E +F +++ + PS EH ++ + + G++ A Q I +
Sbjct: 431 VCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYD 490
Query: 416 ASMLGALLSGCINHRNFELAEIVGRKLIEL-EPDHDGR-YIGLSNVYAGVKRWDDARGMR 473
ALL C ++ + A+ V K+IEL + D D YI +SN+YA +RW + +R
Sbjct: 491 GVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIR 550
Query: 474 EAMERRGVKKSPGFSSVE 491
+ M GV K G S ++
Sbjct: 551 KIMRESGVLKEVGSSWID 568
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 146/348 (41%), Gaps = 75/348 (21%)
Query: 82 WNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHII 141
W+TI+ + + I L ++++ G PD L + S +H ++
Sbjct: 24 WSTIVPALARFGS-IGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVT 82
Query: 142 KTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHK 201
K G + + NSL+ Y K DS+++ AHK
Sbjct: 83 KHGFVSNTRLSNSLMRFY----------KTSDSLED---------------------AHK 111
Query: 202 VFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGA 261
VF+ M + DV SW+SL+ GYV++G ++E + +F ++ NE + + L ACA L
Sbjct: 112 VFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHL 171
Query: 262 LEKGKMMHKYIVDNGLPL-TLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAM 320
G +H +V GL +V+ L+DMY KCG +++A+LVF + ++ D + WNA+
Sbjct: 172 SPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEK--DTVSWNAI 229
Query: 321 IGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGM 380
+ + +G +E L F M D VTY
Sbjct: 230 VASCSRNGKLELGLWFFHQMP----NPDTVTYNE-------------------------- 259
Query: 381 TPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCIN 428
++D ++G A+Q + MP P +S +L+G +N
Sbjct: 260 ---------LIDAFVKSGDFNNAFQVLSDMP-NPNSSSWNTILTGYVN 297
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 218/481 (45%), Gaps = 51/481 (10%)
Query: 16 TLLSLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
TL S+L GC + K +H I + + + + V+ S + G + +AF
Sbjct: 403 TLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVI--SMYAKCGRFSPALKAFE 460
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
+L +N + +GY+ + ++ ++ M HG+ PD T + + A +
Sbjct: 461 RLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYAR 520
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G V+ IIK G + + + ++LI+M+ C + A +FD K
Sbjct: 521 GSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFD------------------K 562
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
CG E+ SW+ +++GY+ G+ EA+A F +M+ + N VT V++
Sbjct: 563 CG------------FEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNI 610
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT 312
+ A A L AL G +H ++ G + SLVDMYAKCG IE + F +S +
Sbjct: 611 VRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKY- 669
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFF 372
++ WN M+ A HG ++ LF MQ +K D V++ H GLV+E F
Sbjct: 670 -IVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIF 728
Query: 373 ESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRN 431
E + ++ + EHYACMVD+L +AG A + + +M ++ + + GALL+ H N
Sbjct: 729 EEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCN 788
Query: 432 FELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVE 491
L+ +L++LEP + Y R + E +KK P S +E
Sbjct: 789 LWLSNAALCQLVKLEPLNPSHY-------------SQDRRLGEVNNVSRIKKVPACSWIE 835
Query: 492 I 492
+
Sbjct: 836 V 836
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 177/405 (43%), Gaps = 77/405 (19%)
Query: 16 TLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLS 75
LL +L CK+ L Q+H LI SGL I+ F D S F +
Sbjct: 7 NLLLMLRECKNFRCLLQVHGSLIVSGLKPHNQLINAYSLFQRQ------DLSRVIFDSVR 60
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRH-GLAPDYLTYPFLAKASARLLNQETGV 134
P + +WN++IRGY+ + ++L F M G+ PD ++ F KA A ++ + G+
Sbjct: 61 DPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGL 120
Query: 135 SVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCG 194
+H I + G E D +I +L+ MY ++V A +VFD + K++V+WN+M+ G A+ G
Sbjct: 121 RIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNG 180
Query: 195 EMVLAHKVFESM----------------------SERDVRSW---------------SSL 217
A +F M + DV S L
Sbjct: 181 CSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGL 240
Query: 218 IDGYVKAGEYREAMAVFEK-------------------------------MRAVGPKANE 246
ID Y + A +VFE+ MR + N+
Sbjct: 241 IDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNK 300
Query: 247 VTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHG 306
V S L A A++G L KG +H Y V GL + + TSL+ MY+KCG +E A +F
Sbjct: 301 VAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFIN 360
Query: 307 VSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVT 351
+ R DV+ W+AMI G +E++ LF+DM + IK + VT
Sbjct: 361 IEDR--DVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVT 403
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 163/371 (43%), Gaps = 34/371 (9%)
Query: 33 LHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNS 92
+H + GL D + ++ S S G+++ + + F + + W+ +I Y +
Sbjct: 322 IHDYAVQQGLIGDVSVATSLM--SMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQA 379
Query: 93 KNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQ 152
+++S+F M+R + P+ +T + + A + G S+H + IK E +
Sbjct: 380 GQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETA 439
Query: 153 NSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVR 212
++I MYA CG A K F+ + K+ V++N++ GY + G+ A+K F+
Sbjct: 440 TAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGD---ANKAFD-------- 488
Query: 213 SWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYI 272
V++ M+ G + TMV +L CA +G ++ I
Sbjct: 489 --------------------VYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQI 528
Query: 273 VDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEE 332
+ +G + +L++M+ KC A+ A+++F K+ V WN M+ G HG EE
Sbjct: 529 IKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTV-SWNIMMNGYLLHGQAEE 587
Query: 333 SLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVD 392
++ F+ M+ + + VT+ ++ SL +CG + +VD
Sbjct: 588 AVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVD 647
Query: 393 VLARAGQLATA 403
+ A+ G + ++
Sbjct: 648 MYAKCGMIESS 658
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 106/193 (54%), Gaps = 6/193 (3%)
Query: 163 GNIVWAHKVFDSVQEKNLVS----WNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLI 218
G++V + D ++ L+ S++ Y+KCGE+ +A ++F ++ +RDV SWS++I
Sbjct: 314 GDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMI 373
Query: 219 DGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLP 278
Y +AG++ EA+++F M + K N VT+ SVL CA + A GK +H Y + +
Sbjct: 374 ASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIE 433
Query: 279 LTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFK 338
L T+++ MYAKCG AL F + + D + +NA+ G G ++ ++K
Sbjct: 434 SELETATAVISMYAKCGRFSPALKAFERLPIK--DAVAFNALAQGYTQIGDANKAFDVYK 491
Query: 339 DMQAVGIKADEVT 351
+M+ G+ D T
Sbjct: 492 NMKLHGVCPDSRT 504
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 141/511 (27%), Positives = 229/511 (44%), Gaps = 47/511 (9%)
Query: 16 TLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDY-SYRAFSQL 74
TL S+L C+ KQ+H + + GL + V+ + G Y ++ F +
Sbjct: 163 TLSSVLTSCRYE-PGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAI 221
Query: 75 SSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTY----PFLAKASARLLNQ 130
+ WN++I + +++ +F++M G+ D T L K+S + N+
Sbjct: 222 KFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNE 281
Query: 131 --ETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLD 188
+ + +H+ +K+G + +LI +Y+ ML+
Sbjct: 282 VSKCCLQLHSLTVKSGLVTQTEVATALIKVYSE------------------------MLE 317
Query: 189 GYAKCGEMVLAHKVFESMSE-RDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEV 247
Y C +K+F MS RD+ +W+ +I + R A+ +F ++R +
Sbjct: 318 DYTDC------YKLFMEMSHCRDIVAWNGIITAFAVYDPER-AIHLFGQLRQEKLSPDWY 370
Query: 248 TMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGV 307
T SVL ACA L +H ++ G VL SL+ YAKCG+++ + VF +
Sbjct: 371 TFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDM 430
Query: 308 SKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKE 367
R DV+ WN+M+ + HG V+ L +F+ M I D T+ H G V+E
Sbjct: 431 DSR--DVVSWNSMLKAYSLHGQVDSILPVFQKMD---INPDSATFIALLSACSHAGRVEE 485
Query: 368 AWHFFESL-DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGC 426
F S+ +K P HYAC++D+L+RA + A A + I QMPM+P A + ALL C
Sbjct: 486 GLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSC 545
Query: 427 INHRNFELAEIVGRKLIEL-EPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSP 485
H N L ++ KL EL EP + YI +SN+Y +++A + ME V+K P
Sbjct: 546 RKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEP 605
Query: 486 GFSSVEICGVSRRFIAHDKTHSDSEETYSML 516
S EI F + + D E Y L
Sbjct: 606 DLSWTEIGNKVHEFASGGRHRPDKEAVYREL 636
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 117/239 (48%), Gaps = 41/239 (17%)
Query: 117 YPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQ 176
Y L +A A N G+++H H+ L H Y N++ A
Sbjct: 62 YAALFQACAEQRNLLDGINLHHHM--------------LSHPYCYSQNVILA-------- 99
Query: 177 EKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEK 236
N +++ YAKCG ++ A +VF++M ER+V SW++LI GYV+AG +E +F
Sbjct: 100 -------NFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSS 152
Query: 237 MRA-VGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKC- 294
M + P NE T+ SVL +C + E GK +H + GL ++ + +++ MY +C
Sbjct: 153 MLSHCFP--NEFTLSSVLTSCRY----EPGKQVHGLALKLGLHCSIYVANAVISMYGRCH 206
Query: 295 --GAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVT 351
A EA VF + + +++ WN+MI ++++G+F M + G+ D T
Sbjct: 207 DGAAAYEAWTVFEAIKFK--NLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRAT 263
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 141/346 (40%), Gaps = 39/346 (11%)
Query: 14 NQTLLSLLDGC---KSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRA 70
Q +L C +++L+ LH +++ + I + + G+I Y+ +
Sbjct: 59 QQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQV 118
Query: 71 FSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQ 130
F + + W +I GY + N + +F ML H ++ L
Sbjct: 119 FDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFPNEFTLSSVLTSC-----RY 173
Query: 131 ETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHK---VFDSVQEKNLVSWNSML 187
E G VH +K G ++ N++I MY C + A++ VF++++ KNLV+WNSM+
Sbjct: 174 EPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMI 233
Query: 188 DGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEV 247
+ C A VF M V G+ +A ++++ V NEV
Sbjct: 234 AAFQCCNLGKKAIGVFMRMHSDGV--------GFDRATLLNICSSLYKSSDLV---PNEV 282
Query: 248 TMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAK-CGAIEEALLVFHG 306
+ + +H V +GL + T+L+ +Y++ + +F
Sbjct: 283 SKCCL--------------QLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFME 328
Query: 307 VSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
+S + D++ WN +I A + E ++ LF ++ + D T+
Sbjct: 329 MSHCR-DIVAWNGIITAFAVYDP-ERAIHLFGQLRQEKLSPDWYTF 372
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 129/436 (29%), Positives = 214/436 (49%), Gaps = 28/436 (6%)
Query: 1 MP--GVSPSFKIANLNQ-TLLSLLDGCKSMLEL----KQLHAILITSGLSQDEPFISKVL 53
MP G SP NQ T +S+L G S+++L +Q+H +LI +G + ++
Sbjct: 307 MPEHGFSP-------NQGTYVSVL-GVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALI 358
Query: 54 CFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPD 113
F A G+++ S F + I WN ++ GY+N PI LS+FL+ML+ G P
Sbjct: 359 DFYA--KCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPI-CLSLFLQMLQMGFRPT 415
Query: 114 YLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFD 173
T+ K+ Q+ +H+ I++ G+E + ++ +SL+ YA + A + D
Sbjct: 416 EYTFSTALKSCCVTELQQ----LHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLD 471
Query: 174 -SVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMA 232
+ ++V N + Y++ G+ + K+ ++ + D SW+ I ++ + E +
Sbjct: 472 WASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIE 531
Query: 233 VFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIV--DNGLPLTLVLQTSLVDM 290
+F+ M + ++ T VS+L C+ L L G +H I D T V L+DM
Sbjct: 532 LFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNV-LIDM 590
Query: 291 YAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEV 350
Y KCG+I + VF R+ +++ W A+I L HG +E+L FK+ ++G K D V
Sbjct: 591 YGKCGSIRSVMKVFE--ETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRV 648
Query: 351 TYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQM 410
++ HGG+VKE F+ + G+ P +HY C VD+LAR G L A I +M
Sbjct: 649 SFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREM 708
Query: 411 PMEPTASMLGALLSGC 426
P A + L GC
Sbjct: 709 PFPADAPVWRTFLDGC 724
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 159/341 (46%), Gaps = 13/341 (3%)
Query: 16 TLLSLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
+ L +L G + +L KQLH GL + ++ ++ SA G+ + R F
Sbjct: 217 SFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLI--SAYGKCGNTHMAERMFQ 274
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
S I WN II + S+NP+++L +F+ M HG +P+ TY + S+ +
Sbjct: 275 DAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSC 334
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYA- 191
G +H +IK G E + N+LI YA CGN+ + FD +++KN+V WN++L GYA
Sbjct: 335 GRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYAN 394
Query: 192 KCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVS 251
K G + L+ +F M + R +K+ E + + +G + N+ + S
Sbjct: 395 KDGPICLS--LFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSS 452
Query: 252 VLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRK 311
++ + A + ++ + P ++V + +Y++ G E++ + + +
Sbjct: 453 LMRSYAKNQLMNDALLLLDWASG---PTSVVPLNIVAGIYSRRGQYHESVKLISTL--EQ 507
Query: 312 TDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
D + WN I + EE + LFK M I+ D+ T+
Sbjct: 508 PDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTF 548
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 171/418 (40%), Gaps = 81/418 (19%)
Query: 10 IANLNQTLLSLLDGCK---SMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDY 66
+AN N ++SLL+ C+ S K LHA+ IT +P S G++
Sbjct: 8 LANHNDRVVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSL 67
Query: 67 SYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASAR 126
+ + F Q+ +NTII+GYS + ++ +F +M G P+ T L ++
Sbjct: 68 AGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCAS- 126
Query: 127 LLNQETGVSVHAHIIKTG-HEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNS 185
L+ G +H +K G D F+ L+ +Y + A +VF+ + K+L +WN
Sbjct: 127 -LDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNH 185
Query: 186 M-----------------------------------LDGYAKCGEMVLAHKVFESMSER- 209
M L G + ++ ++ ++ S +++
Sbjct: 186 MMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKG 245
Query: 210 ---DVRSWSSLIDGYVKAGEYREAMAVFE------------------------------- 235
++ +SLI Y K G A +F+
Sbjct: 246 LDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFV 305
Query: 236 KMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCG 295
M G N+ T VSVL + + L G+ +H ++ NG +VL +L+D YAKCG
Sbjct: 306 SMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCG 365
Query: 296 AIEEALLVFHGVSKRKTDVLIWNAMIGGLATH-GSVEESLGLFKDMQAVGIKADEVTY 352
+E++ L F + R +++ WNA++ G A G + L LF M +G + E T+
Sbjct: 366 NLEDSRLCFDYI--RDKNIVCWNALLSGYANKDGPI--CLSLFLQMLQMGFRPTEYTF 419
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 209/443 (47%), Gaps = 19/443 (4%)
Query: 62 GDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLA 121
G +D + R F ++S WN II Y++ + ++ + +M G+ +T+ +A
Sbjct: 233 GKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIA 292
Query: 122 KASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASC---GNIVWAHKVFDSVQEK 178
N ++ ++ + R ++I+ +C G + W KVF + +
Sbjct: 293 GGCLEAGNYIGALNC---VVGMRNCNVRIGSVAMINGLKACSHIGALKWG-KVFHCLVIR 348
Query: 179 NLV-------SWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAM 231
+ NS++ Y++C ++ A VF+ + + +W+S+I G+ E
Sbjct: 349 SCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETS 408
Query: 232 AVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVD-NGLPLTLVLQTSLVDM 290
+ ++M G N +T+ S+L A +G L+ GK H YI+ L+L SLVDM
Sbjct: 409 FLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDM 468
Query: 291 YAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEV 350
YAK G I A VF S RK D + + ++I G G E +L FKDM GIK D V
Sbjct: 469 YAKSGEIIAAKRVFD--SMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHV 526
Query: 351 TYXXXXXXXXHGGLVKEA-WHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQ 409
T H LV+E W F + G+ EHY+CMVD+ RAG L A
Sbjct: 527 TMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHT 586
Query: 410 MPMEPTASMLGALLSGCINHRNFELAEIVGRK-LIELEPDHDGRYIGLSNVYAGVKRWDD 468
+P EP+++M LL C+ H N + E K L+E +P+H G Y+ L+++YA W
Sbjct: 587 IPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSK 646
Query: 469 ARGMREAMERRGVKKSPGFSSVE 491
++ + GV+K+ F+ +E
Sbjct: 647 LVTVKTLLSDLGVQKAHEFALME 669
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 196/407 (48%), Gaps = 35/407 (8%)
Query: 16 TLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLS 75
+LLS G + +QLHA I+SGL D + K++ F + N D + S++
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEIL 147
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVS 135
P WN +I Y +K +S+S++ +M+ G+ D TYP + KA A LL+ G
Sbjct: 148 HP--LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRV 205
Query: 136 VHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYA---K 192
VH I + H + ++ N+LI MY G + A ++FD + E++ VSWN++++ Y K
Sbjct: 206 VHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEK 265
Query: 193 CGEMV-LAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVS 251
GE L +++ S E + +W+++ G ++AG Y A+ MR + V M++
Sbjct: 266 LGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMIN 325
Query: 252 VLCACAHLGALEKGKMMHKYI---------VDNGLPLTLVLQTSLVDMYAKCGAIEEALL 302
L AC+H+GAL+ GK+ H + +DN ++ SL+ MY++C + A +
Sbjct: 326 GLKACSHIGALKWGKVFHCLVIRSCSFSHDIDN-------VRNSLITMYSRCSDLRHAFI 378
Query: 303 VFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHG 362
VF V WN++I G A + EE+ L K+M G + +T
Sbjct: 379 VFQQVEANSLST--WNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARV 436
Query: 363 GLVKEAWHFFESLDKCGMTPSSEHYAC------MVDVLARAGQLATA 403
G ++ F C + + C +VD+ A++G++ A
Sbjct: 437 GNLQHGKEF-----HCYILRRQSYKDCLILWNSLVDMYAKSGEIIAA 478
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 142/283 (50%), Gaps = 41/283 (14%)
Query: 31 KQLHAILITS-GLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGY 89
K H ++I S S D + L + S D+ +++ F Q+ + + WN+II G+
Sbjct: 340 KVFHCLVIRSCSFSHDIDNVRNSL-ITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGF 398
Query: 90 SNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDR 149
+ ++ ++ + +ML G P+++T + AR+ N + G H +I++
Sbjct: 399 AYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRR------ 452
Query: 150 FIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSER 209
Y C L+ WNS++D YAK GE++ A +VF+SM +R
Sbjct: 453 -------QSYKDC-----------------LILWNSLVDMYAKSGEIIAAKRVFDSMRKR 488
Query: 210 DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKG---- 265
D +++SLIDGY + G+ A+A F+ M G K + VTMV+VL AC+H + +G
Sbjct: 489 DKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLF 548
Query: 266 -KMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGV 307
KM H + G+ L L + +VD+Y + G +++A +FH +
Sbjct: 549 TKMEHVF----GIRLRLEHYSCMVDLYCRAGYLDKARDIFHTI 587
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 209/443 (47%), Gaps = 19/443 (4%)
Query: 62 GDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLA 121
G +D + R F ++S WN II Y++ + ++ + +M G+ +T+ +A
Sbjct: 233 GKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIA 292
Query: 122 KASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASC---GNIVWAHKVFDSVQEK 178
N ++ ++ + R ++I+ +C G + W KVF + +
Sbjct: 293 GGCLEAGNYIGALNC---VVGMRNCNVRIGSVAMINGLKACSHIGALKWG-KVFHCLVIR 348
Query: 179 NLV-------SWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAM 231
+ NS++ Y++C ++ A VF+ + + +W+S+I G+ E
Sbjct: 349 SCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETS 408
Query: 232 AVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVD-NGLPLTLVLQTSLVDM 290
+ ++M G N +T+ S+L A +G L+ GK H YI+ L+L SLVDM
Sbjct: 409 FLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDM 468
Query: 291 YAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEV 350
YAK G I A VF S RK D + + ++I G G E +L FKDM GIK D V
Sbjct: 469 YAKSGEIIAAKRVFD--SMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHV 526
Query: 351 TYXXXXXXXXHGGLVKEA-WHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQ 409
T H LV+E W F + G+ EHY+CMVD+ RAG L A
Sbjct: 527 TMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHT 586
Query: 410 MPMEPTASMLGALLSGCINHRNFELAEIVGRK-LIELEPDHDGRYIGLSNVYAGVKRWDD 468
+P EP+++M LL C+ H N + E K L+E +P+H G Y+ L+++YA W
Sbjct: 587 IPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSK 646
Query: 469 ARGMREAMERRGVKKSPGFSSVE 491
++ + GV+K+ F+ +E
Sbjct: 647 LVTVKTLLSDLGVQKAHEFALME 669
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 196/407 (48%), Gaps = 35/407 (8%)
Query: 16 TLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLS 75
+LLS G + +QLHA I+SGL D + K++ F + N D + S++
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEIL 147
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVS 135
P WN +I Y +K +S+S++ +M+ G+ D TYP + KA A LL+ G
Sbjct: 148 HP--LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRV 205
Query: 136 VHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYA---K 192
VH I + H + ++ N+LI MY G + A ++FD + E++ VSWN++++ Y K
Sbjct: 206 VHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEK 265
Query: 193 CGEMV-LAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVS 251
GE L +++ S E + +W+++ G ++AG Y A+ MR + V M++
Sbjct: 266 LGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMIN 325
Query: 252 VLCACAHLGALEKGKMMHKYI---------VDNGLPLTLVLQTSLVDMYAKCGAIEEALL 302
L AC+H+GAL+ GK+ H + +DN ++ SL+ MY++C + A +
Sbjct: 326 GLKACSHIGALKWGKVFHCLVIRSCSFSHDIDN-------VRNSLITMYSRCSDLRHAFI 378
Query: 303 VFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHG 362
VF V WN++I G A + EE+ L K+M G + +T
Sbjct: 379 VFQQVEANSLST--WNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARV 436
Query: 363 GLVKEAWHFFESLDKCGMTPSSEHYAC------MVDVLARAGQLATA 403
G ++ F C + + C +VD+ A++G++ A
Sbjct: 437 GNLQHGKEF-----HCYILRRQSYKDCLILWNSLVDMYAKSGEIIAA 478
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 142/283 (50%), Gaps = 41/283 (14%)
Query: 31 KQLHAILITS-GLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGY 89
K H ++I S S D + L + S D+ +++ F Q+ + + WN+II G+
Sbjct: 340 KVFHCLVIRSCSFSHDIDNVRNSL-ITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGF 398
Query: 90 SNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDR 149
+ ++ ++ + +ML G P+++T + AR+ N + G H +I++
Sbjct: 399 AYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRR------ 452
Query: 150 FIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSER 209
Y C L+ WNS++D YAK GE++ A +VF+SM +R
Sbjct: 453 -------QSYKDC-----------------LILWNSLVDMYAKSGEIIAAKRVFDSMRKR 488
Query: 210 DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKG---- 265
D +++SLIDGY + G+ A+A F+ M G K + VTMV+VL AC+H + +G
Sbjct: 489 DKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLF 548
Query: 266 -KMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGV 307
KM H + G+ L L + +VD+Y + G +++A +FH +
Sbjct: 549 TKMEHVF----GIRLRLEHYSCMVDLYCRAGYLDKARDIFHTI 587
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 216/463 (46%), Gaps = 43/463 (9%)
Query: 8 FKIANLNQTLLSLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSALSNSGDI 64
+ LN T+ S++ C L L K +HAI + + D + V F +
Sbjct: 257 LNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSV--FDMYVKCDRL 314
Query: 65 DYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKAS 124
+ + R F Q S + W + + GY+ S ++ +F M +
Sbjct: 315 ESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVS------------ 362
Query: 125 ARLLNQETGVSVHAH--------IIKTGHEYDRFIQNSLIHMYASCGNIV------WAHK 170
N G VHAH + E + +L+ + C I AH
Sbjct: 363 ---WNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHG 419
Query: 171 -VFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSE-RDVRSWSSLIDGYVKAGEYR 228
++ + N++ N++LD Y KCG + A+ F MSE RD SW++L+ G + G
Sbjct: 420 FIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSE 479
Query: 229 EAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLV 288
+A++ FE M+ V K ++ T+ ++L CA++ AL GK +H +++ +G + +V++ ++V
Sbjct: 480 QALSFFEGMQ-VEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMV 538
Query: 289 DMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKAD 348
DMY+KC + A+ VF + R D+++WN++I G +G +E LF ++ G+K D
Sbjct: 539 DMYSKCRCFDYAIEVFKEAATR--DLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPD 596
Query: 349 EVTYXXXXXXXXHGGLVKEAWHFFESLD-KCGMTPSSEHYACMVDVLARAGQLATAYQFI 407
VT+ G V+ + +F S+ K ++P EHY CM+++ + G L +F+
Sbjct: 597 HVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFL 656
Query: 408 CQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIE---LEP 447
MP +P ML + C +R +L ++L+ L+P
Sbjct: 657 LLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLMNDHYLQP 699
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 167/325 (51%), Gaps = 6/325 (1%)
Query: 20 LLDGCKSMLELK---QLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSS 76
+L C +L+L+ QLH ++ G S + + ++ + + R F ++ +
Sbjct: 168 VLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIV--DVYGKCRVMSDARRVFDEIVN 225
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P WN I+R Y +++ +F KML + P T + A +R L E G +
Sbjct: 226 PSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVI 285
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEM 196
HA +K D + S+ MY C + A +VFD + K+L SW S + GYA G
Sbjct: 286 HAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLT 345
Query: 197 VLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCAC 256
A ++F+ M ER++ SW++++ GYV A E+ EA+ MR + VT+V +L C
Sbjct: 346 REARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVC 405
Query: 257 AHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLI 316
+ + ++ GK H +I +G +++ +L+DMY KCG ++ A + F +S+ + +V
Sbjct: 406 SGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEV-S 464
Query: 317 WNAMIGGLATHGSVEESLGLFKDMQ 341
WNA++ G+A G E++L F+ MQ
Sbjct: 465 WNALLTGVARVGRSEQALSFFEGMQ 489
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 135/324 (41%), Gaps = 38/324 (11%)
Query: 20 LLDGCKS---MLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSS 76
L C S +++ +++ + L+T S P A G +D + F ++
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVT--FSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPE 124
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
WN +I + + + +F +M R G+ ++ + K+ +L+ +
Sbjct: 125 RDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQL 184
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEM 196
H ++K G+ + ++ S++ +Y C + A +VFD + + VSWN
Sbjct: 185 HCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWN------------ 232
Query: 197 VLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCAC 256
++ Y++ G EA+ +F KM + + T+ SV+ AC
Sbjct: 233 -------------------VIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLAC 273
Query: 257 AHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLI 316
+ ALE GK++H V + V+ TS+ DMY KC +E A VF R D+
Sbjct: 274 SRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFD--QTRSKDLKS 331
Query: 317 WNAMIGGLATHGSVEESLGLFKDM 340
W + + G A G E+ LF M
Sbjct: 332 WTSAMSGYAMSGLTREARELFDLM 355
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 83/163 (50%), Gaps = 2/163 (1%)
Query: 184 NSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPK 243
N ++ Y KCG + A ++FE M ERD SW+++I + G E +F +M G +
Sbjct: 100 NRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVR 159
Query: 244 ANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLV 303
A E + VL +C + L + +H +V G + L+TS+VD+Y KC + +A V
Sbjct: 160 ATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRV 219
Query: 304 FHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIK 346
F + +DV WN ++ G +E++ +F M + ++
Sbjct: 220 FDEIVN-PSDV-SWNVIVRRYLEMGFNDEAVVMFFKMLELNVR 260
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 209/468 (44%), Gaps = 51/468 (10%)
Query: 33 LHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQL-SSPRIFIWNTIIRGYSN 91
LH I + SG + ++ F + G I + + F ++ S ++T++ GY
Sbjct: 147 LHGIALRSGFMVFTDLRNALIHFYCVC--GKISDARKVFDEMPQSVDAVTFSTLMNGYLQ 204
Query: 92 SKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFI 151
+L +F M + + + T A + L + S H IK G + D +
Sbjct: 205 VSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHL 264
Query: 152 QNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDV 211
+LI MY G I A ++ F+ +DV
Sbjct: 265 ITALIGMYGKTGGISSARRI-------------------------------FDCAIRKDV 293
Query: 212 RSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKY 271
+W+ +ID Y K G E + + +M+ K N T V +L +CA+ A G+ +
Sbjct: 294 VTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADL 353
Query: 272 IVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVE 331
+ + + L +L T+LVDMYAK G +E+A+ +F+ + + DV W AMI G HG
Sbjct: 354 LEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDK--DVKSWTAMISGYGAHGLAR 411
Query: 332 ESLGLFKDMQA--VGIKADEVTYXXXXXXXXHGGLVKEAWHFFESL-DKCGMTPSSEHYA 388
E++ LF M+ ++ +E+T+ HGGLV E F+ + + TP EHY
Sbjct: 412 EAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYG 471
Query: 389 CMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPD 448
C+VD+L RAGQL AY+ I +P+ ++ ALL+ C + N +L E V +L E+
Sbjct: 472 CVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGET 531
Query: 449 HDGRYIGLSNVYAGV----KRWDDARGMREAMERRGVKKSPGFSSVEI 492
H I L+ +A K D+ E +K G+S++EI
Sbjct: 532 HPADAILLAGTHAVAGNPEKSLDN--------ELNKGRKEAGYSAIEI 571
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 170/339 (50%), Gaps = 37/339 (10%)
Query: 15 QTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQL 74
Q L++ L C+ +E+ ++H ++ +GL +D+ +SK+L FS++ DI Y+ F +
Sbjct: 29 QKLINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAFSSVL---DIRYASSIFEHV 85
Query: 75 SSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGV 134
S+ +F++NT+IRGYS S P ++ S+F ++ GL D ++ K+ +R L G
Sbjct: 86 SNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGE 145
Query: 135 SVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSV-QEKNLVSWNSMLDGYAKC 193
+H +++G ++N+LIH Y CG I A KVFD + Q + V+++++++GY +
Sbjct: 146 GLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQV 205
Query: 194 GEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVL 253
+ LA +F M + +V N T++S L
Sbjct: 206 SKKALALDLFRIMRKSEV-------------------------------VVNVSTLLSFL 234
Query: 254 CACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTD 313
A + LG L + H + GL L L L T+L+ MY K G I A +F ++ D
Sbjct: 235 SAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRK--D 292
Query: 314 VLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
V+ WN MI A G +EE + L + M+ +K + T+
Sbjct: 293 VVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTF 331
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 212/466 (45%), Gaps = 48/466 (10%)
Query: 31 KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYS 90
+Q+HA++I G + ISK S G + S R F + + WN ++ G+
Sbjct: 104 RQVHALMIKQG--AETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFL 161
Query: 91 NSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRF 150
+ ++L +F M R + T + K A L + G VHA ++ TG +
Sbjct: 162 RNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL-VV 220
Query: 151 IQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERD 210
+ ++I Y+S G I A KV++S+ N+ + ML+
Sbjct: 221 LGTAMISFYSSVGLINEAMKVYNSL---NVHTDEVMLN---------------------- 255
Query: 211 VRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHK 270
SLI G ++ Y+EA + + R N + S L C+ L GK +H
Sbjct: 256 -----SLISGCIRNRNYKEAFLLMSRQRP-----NVRVLSSSLAGCSDNSDLWIGKQIHC 305
Query: 271 YIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSV 330
+ NG L L+DMY KCG I +A +F + + V+ W +MI A +G
Sbjct: 306 VALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSK--SVVSWTSMIDAYAVNGDG 363
Query: 331 EESLGLFKDM--QAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESL-DKCGMTPSSEHY 387
++L +F++M + G+ + VT+ H GLVKE F + +K + P +EHY
Sbjct: 364 VKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHY 423
Query: 388 ACMVDVLARAGQLATAYQFICQMPMEPTASMLGAL----LSGCINHRNFELAEIVGRKLI 443
C +D+L++AG+ ++ + +M S+ A+ LS C + + E V R+L+
Sbjct: 424 VCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLM 483
Query: 444 -ELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFS 488
E P++ Y+ +SN YA + +WD +R ++ +G+ K+ G S
Sbjct: 484 EETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 132/247 (53%), Gaps = 37/247 (14%)
Query: 92 SKNPIQSLSIFLKMLRHGLAPDYLTYPF--LAKASARLLNQETGVSVHAHIIKTGHEYDR 149
S NP +L++FL++ H +PD ++ F + A + L ETG VHA +IK G E
Sbjct: 62 SGNPNDTLALFLQI--HRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGT 119
Query: 150 FIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSER 209
+ +LI MY+ G++V + +VF+SV+EK+LVSWN++L
Sbjct: 120 ISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALL---------------------- 157
Query: 210 DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMH 269
G+++ G+ +EA+ VF M + +E T+ SV+ CA L L++GK +H
Sbjct: 158 ---------SGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVH 208
Query: 270 KYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGS 329
+V G L +VL T+++ Y+ G I EA+ V++ ++ TD ++ N++I G + +
Sbjct: 209 AMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVH-TDEVMLNSLISGCIRNRN 266
Query: 330 VEESLGL 336
+E+ L
Sbjct: 267 YKEAFLL 273
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 117/237 (49%), Gaps = 3/237 (1%)
Query: 199 AHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAH 258
A +F+ + +RD+ S +S + ++++G + +A+F ++ P + T VL AC+
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 259 LGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWN 318
L E G+ +H ++ G + +T+L+DMY+K G + +++ VF V ++ D++ WN
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEK--DLVSWN 154
Query: 319 AMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKC 378
A++ G +G +E+LG+F M ++ E T ++++ +
Sbjct: 155 ALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVT 214
Query: 379 GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELA 435
G A M+ + G + A + + + ML +L+SGCI +RN++ A
Sbjct: 215 GRDLVVLGTA-MISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEA 270
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 130/294 (44%), Gaps = 52/294 (17%)
Query: 16 TLLSLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
TL S++ C S+ L KQ+HA+++ +G +D + + S S+ G I+ + + ++
Sbjct: 187 TLSSVVKTCASLKILQQGKQVHAMVVVTG--RDLVVLGTAM-ISFYSSVGLINEAMKVYN 243
Query: 73 QLS--SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQ 130
L+ + + + N++I G ++N ++ FL M R P+ + +
Sbjct: 244 SLNVHTDEVML-NSLISGCIRNRNYKEA---FLLMSRQ--RPNVRVLSSSLAGCSDNSDL 297
Query: 131 ETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGY 190
G +H ++ G D + N L+ MY CG IV A +F ++ K++VSW SM+D Y
Sbjct: 298 WIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAY 357
Query: 191 AKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMV 250
A G+ V A ++F M E G N VT +
Sbjct: 358 AVNGDGVKALEIFREMCE-----------------------------EGSGVLPNSVTFL 388
Query: 251 SVLCACAHLGALEKGK-----MMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEE 299
V+ ACAH G +++GK M KY + G + +D+ +K G EE
Sbjct: 389 VVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVC----FIDILSKAGETEE 438
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/530 (24%), Positives = 237/530 (44%), Gaps = 62/530 (11%)
Query: 12 NLNQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAF 71
++N L+ M +++ L+ ++ ++QD ++++ +A + G +D + F
Sbjct: 321 SVNNALIGFYSKFWDMKKVESLYEMM----MAQDAVTFTEMI--TAYMSFGMVDSAVEIF 374
Query: 72 SQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQE 131
+ ++ +N ++ G+ + + +++L +F ML+ G+ + A + ++
Sbjct: 375 ANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKK 434
Query: 132 TGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYA 191
+H IK G ++ IQ +L+ M C + A ++FD W S LD
Sbjct: 435 VSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQ--------WPSNLDS-- 484
Query: 192 KCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPK-ANEVTMV 250
++ +S+I GY + G +A+++F + +EV++
Sbjct: 485 -------------------SKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLT 525
Query: 251 SVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR 310
+L C LG E G +H Y + G + L SL+ MYAKC ++A+ +F+ + R
Sbjct: 526 LILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFN--TMR 583
Query: 311 KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWH 370
+ DV+ WN++I + +E+L L+ M IK D +T LV A+
Sbjct: 584 EHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLT----------LVISAFR 633
Query: 371 FFES--LDKC-----------GMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTAS 417
+ ES L C + P++EHY V VL G L A I MP++P S
Sbjct: 634 YTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVS 693
Query: 418 MLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAME 477
+L ALL C H N +A+ V + ++ +P+ YI SN+Y+ W + +RE M
Sbjct: 694 VLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMR 753
Query: 478 RRGVKKSPGFSSVEICGVSRRFIAHDKTHSDSEETYSMLNFVAYQ-MKLG 526
RG +K P S + F A D +H ++ Y L + + +K+G
Sbjct: 754 ERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEILIMECLKVG 803
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 166/403 (41%), Gaps = 97/403 (24%)
Query: 70 AFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLA-PDYLTYPFLAKASARLL 128
F LSSP + + +I G+S I++L +F +M + GL P+ T+ + A R+
Sbjct: 136 VFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVS 195
Query: 129 NQETGVSVHAHIIKTGHEYDRFIQNSLIHMY-----ASCGNIVWAHKVFDSVQEKNLVSW 183
G+ +H I+K+G F+ NSL+ +Y +SC +++ K+FD + ++++ SW
Sbjct: 196 RFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVL---KLFDEIPQRDVASW 252
Query: 184 NSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPK 243
N+++ K G+ +HK F+ +E R G
Sbjct: 253 NTVVSSLVKEGK---SHKAFD---------------------------LFYEMNRVEGFG 282
Query: 244 ANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAK---------- 293
+ T+ ++L +C L +G+ +H + GL L + +L+ Y+K
Sbjct: 283 VDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESL 342
Query: 294 ---------------------CGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEE 332
G ++ A+ +F V+++ T + +NA++ G +G +
Sbjct: 343 YEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNT--ITYNALMAGFCRNGHGLK 400
Query: 333 SLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKE----------AWHFFESLDKCGMTP 382
+L LF DM G+ E+T GLV E F + + C T
Sbjct: 401 ALKLFTDMLQRGV---ELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTA 457
Query: 383 SSEHYACMVDVLARAGQLATAYQFICQMP-----MEPTASMLG 420
++D+ R ++A A + Q P + T S++G
Sbjct: 458 -------LLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIG 493
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 168 AHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEY 227
H F ++E+ N+++ Y K G A VF S+S V S+++LI G+ +
Sbjct: 102 VHASFLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLE 161
Query: 228 REAMAVFEKMRAVG-PKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTS 286
EA+ VF +MR G + NE T V++L AC + G +H IV +G ++ + S
Sbjct: 162 IEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNS 221
Query: 287 LVDMYAK--CGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAV- 343
L+ +Y K + ++ L +F + +R DV WN ++ L G ++ LF +M V
Sbjct: 222 LMSLYDKDSGSSCDDVLKLFDEIPQR--DVASWNTVVSSLVKEGKSHKAFDLFYEMNRVE 279
Query: 344 GIKADEVT 351
G D T
Sbjct: 280 GFGVDSFT 287
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/494 (25%), Positives = 227/494 (45%), Gaps = 49/494 (9%)
Query: 10 IANLNQTLLSLLDGC---KSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDY 66
+A T ++ GC + + E KQLH++++ SG + F++ VL S GD+
Sbjct: 209 VAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVL-VDYYSACGDLSG 267
Query: 67 SYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASAR 126
S R+F+ + + WN+I+ ++ + + SL +F KM G P + +R
Sbjct: 268 SMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSR 327
Query: 127 LLNQETGVSVHAHIIKTGHEYDRF-IQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNS 185
+ ++G +H +++K G + +Q++LI MY C I + ++ S+ NL NS
Sbjct: 328 NSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNS 387
Query: 186 MLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKAN 245
++ CG ++ + +F M G +
Sbjct: 388 LMTSLMHCGIT-------------------------------KDIIEMFGLMIDEGTGID 416
Query: 246 EVTMVSVLCACAHL--GALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLV 303
EVT+ +VL A + +L ++H + +G + + SL+D Y K G E + V
Sbjct: 417 EVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKV 476
Query: 304 FHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGG 363
F + ++ ++I G A +G + + + ++M + + DEVT H G
Sbjct: 477 FDELD--TPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSG 534
Query: 364 LVKEAWHFFESLD-KCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGAL 422
LV+E F+SL+ K G++P + YACMVD+L RAG + A + + Q + +L
Sbjct: 535 LVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSL 594
Query: 423 LSGCINHRNFELAEIVGRK----LIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMER 478
L C HRN E +GR+ L+ LEP++ YI +S Y + ++ +R +RE
Sbjct: 595 LQSCRIHRN----ETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAAS 650
Query: 479 RGVKKSPGFSSVEI 492
R + + G+SSV +
Sbjct: 651 RELMREIGYSSVVV 664
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 170/371 (45%), Gaps = 38/371 (10%)
Query: 58 LSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTY 117
L SG++ ++ AF ++S + +N +I G S ++++ ++ +M+ GL T+
Sbjct: 56 LIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTF 115
Query: 118 PFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQE 177
P + + L G+ VH +I G + F++++L+ +YA + A K+FD + +
Sbjct: 116 PSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLD 175
Query: 178 KNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKM 237
+NL N +L + + GE + ++FE V+ +M
Sbjct: 176 RNLAVCNLLLRCFCQTGE---SKRLFE----------------------------VYLRM 204
Query: 238 RAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLT-LVLQTSLVDMYAKCGA 296
G N +T ++ C+H + +GK +H +V +G ++ + + LVD Y+ CG
Sbjct: 205 ELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGD 264
Query: 297 IEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXX 356
+ ++ F+ V ++ DV+ WN+++ A +GSV +SL LF MQ G + +
Sbjct: 265 LSGSMRSFNAVPEK--DVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFL 322
Query: 357 XXXXHGGLVKEAWHFFESLDKCGMTPSSEHY-ACMVDVLARAGQL---ATAYQFICQMPM 412
++ + K G SS H + ++D+ + + A YQ + + +
Sbjct: 323 NFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNL 382
Query: 413 EPTASMLGALL 423
E S++ +L+
Sbjct: 383 ECCNSLMTSLM 393
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 114/251 (45%), Gaps = 7/251 (2%)
Query: 172 FDSVQEKN----LVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEY 227
F S E+N + + N +D K G ++ AH+ F+ MS RDV +++ LI G + G
Sbjct: 34 FSSFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCS 93
Query: 228 REAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSL 287
A+ ++ +M + G + + T SVL C+ +G +H ++ G + ++++L
Sbjct: 94 LRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSAL 153
Query: 288 VDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKA 347
V +YA ++ AL +F + R ++ + N ++ G + ++ M+ G+
Sbjct: 154 VGLYACLRLVDVALKLFDEMLDR--NLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAK 211
Query: 348 DEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYA-CMVDVLARAGQLATAYQF 406
+ +TY H LV E + K G S+ A +VD + G L+ + +
Sbjct: 212 NGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRS 271
Query: 407 ICQMPMEPTAS 417
+P + S
Sbjct: 272 FNAVPEKDVIS 282
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 121/496 (24%), Positives = 215/496 (43%), Gaps = 41/496 (8%)
Query: 31 KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYS 90
+Q+H I SG+S+ + + G DY+ F + + WN +I S
Sbjct: 153 EQIHGNAICSGVSRYNLVVWNSV-MDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCS 211
Query: 91 NSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRF 150
+S N +L F M + PD T + + L G A IK G +
Sbjct: 212 DSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSI 271
Query: 151 IQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK--CGEMVLAHKVFESMSE 208
+ + I M++ C + + K+F +++ + V NSM+ Y+ CGE
Sbjct: 272 VLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGE------------- 318
Query: 209 RDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMM 268
+A+ +F + ++ T SVL + + L+ G +
Sbjct: 319 --------------------DALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADV 357
Query: 269 HKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHG 328
H ++ G L + TSL++MY K G+++ A+ VF + D++ WN +I GLA +
Sbjct: 358 HSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGK--DLIFWNTVIMGLARNS 415
Query: 329 SVEESLGLFKDM-QAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKC-GMTPSSEH 386
ESL +F + +K D VT + G V E F S++K G+ P +EH
Sbjct: 416 RAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEH 475
Query: 387 YACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELE 446
YAC++++L R G + A ++P EP++ + +L ++ + LAE V + ++E E
Sbjct: 476 YACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESE 535
Query: 447 PDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAHDKTH 506
P Y+ L +Y RW+++ +R AM +K + G S + I F A
Sbjct: 536 PKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEADQLQI 595
Query: 507 SDSEETYSMLNFVAYQ 522
+T ++L+ +++
Sbjct: 596 HGGHDTCALLDLLSWD 611
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 134/308 (43%), Gaps = 35/308 (11%)
Query: 45 DEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLK 104
D+ I+ +C L +G ++ + F ++ + WNT+I G + + +F
Sbjct: 67 DKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFD 126
Query: 105 MLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGN 164
M R + P T+ LA + G +H + I +G
Sbjct: 127 MQRWEIRPTEFTFSILASLVTCV---RHGEQIHGNAICSG-------------------- 163
Query: 165 IVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKA 224
V NLV WNS++D Y + G A VF +M +RDV SW+ LI +
Sbjct: 164 ----------VSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDS 213
Query: 225 GEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQ 284
G A+ F MR + + +E T+ V+ C+ L L KGK + G ++
Sbjct: 214 GNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVL 273
Query: 285 TSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVG 344
+ +DM++KC +++++ +F + K D ++ N+MIG + H E++L LF
Sbjct: 274 GAGIDMFSKCNRLDDSVKLFREL--EKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQS 331
Query: 345 IKADEVTY 352
++ D+ T+
Sbjct: 332 VRPDKFTF 339
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 106/251 (42%), Gaps = 48/251 (19%)
Query: 24 CKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSA----LSNSGDIDYSYRAFSQLSS 76
C + EL KQ A+ I G F+S + A S +D S + F +L
Sbjct: 245 CSDLRELSKGKQALALCIKMG------FLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEK 298
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYP-FLAKASARLLNQETGVS 135
+ N++I YS +L +F+ + + PD T+ L+ +A +L+ G
Sbjct: 299 WDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVMLDH--GAD 356
Query: 136 VHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGE 195
VH+ +IK G + D + SL+ MY G++ A VF K+L+ WN+++ G A+
Sbjct: 357 VHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSR 416
Query: 196 MVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEK-MRAVGPKANEVTMVSVLC 254
V E++A+F + + K + VT++ +L
Sbjct: 417 AV-------------------------------ESLAIFNQLLMNQSLKPDRVTLMGILV 445
Query: 255 ACAHLGALEKG 265
AC + G + +G
Sbjct: 446 ACCYAGFVNEG 456
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 174/393 (44%), Gaps = 37/393 (9%)
Query: 16 TLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLS 75
T+L +L K++ K++HA ++ S ++PF+ L GD+ R F
Sbjct: 321 TILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGL-IDLYCKCGDMASGRRVFYGSK 379
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVS 135
W ++ GY+ + Q+L + M + G PD +T + A L + G
Sbjct: 380 QRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKE 439
Query: 136 VHAHIIKTGHEYDRFIQN-SLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCG 194
+H + +K + F+ N SL+ S++ Y+KCG
Sbjct: 440 IHCYALK-----NLFLPNVSLV---------------------------TSLMVMYSKCG 467
Query: 195 EMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLC 254
++F+ + +R+V++W+++ID YV+ + R + VF M + + VTM VL
Sbjct: 468 VPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLT 527
Query: 255 ACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDV 314
C+ L AL+ GK +H +I+ + ++ MY KCG + A F V+ + +
Sbjct: 528 VCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGS-- 585
Query: 315 LIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFE- 373
L W A+I + +++ F+ M + G + T+ G V EA+ FF
Sbjct: 586 LTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNL 645
Query: 374 SLDKCGMTPSSEHYACMVDVLARAGQLATAYQF 406
L + PS EHY+ ++++L R G++ A +
Sbjct: 646 MLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 131/267 (49%), Gaps = 31/267 (11%)
Query: 74 LSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETG 133
L S +I + I+ ++ N +L+I + + G+ + T+ L +A R + G
Sbjct: 71 LHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHG 130
Query: 134 VSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKC 193
VH HI G E + F++ L+HMY +CG++ A KVFD N+ SWN++L G
Sbjct: 131 KQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVIS 190
Query: 194 GEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVL 253
G+ Y++ ++ F +MR +G N ++ +V
Sbjct: 191 GK-----------------------------KRYQDVLSTFTEMRELGVDLNVYSLSNVF 221
Query: 254 CACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTD 313
+ A AL +G H + NGL ++ L+TSLVDMY KCG + A VF + +R D
Sbjct: 222 KSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVER--D 279
Query: 314 VLIWNAMIGGLATHGSVEESLGLFKDM 340
+++W AMI GLA + E+LGLF+ M
Sbjct: 280 IVVWGAMIAGLAHNKRQWEALGLFRTM 306
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 164/348 (47%), Gaps = 52/348 (14%)
Query: 16 TLLSLLDGC---KSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
T +LL+ C KS+L KQ+H + +GL +E +K++ + G + + + F
Sbjct: 113 TFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLV--HMYTACGSVKDAQKVFD 170
Query: 73 QLSSPRIFIWNTIIRG--YSNSKNPIQSLSIFLKMLRHGLAPDY--LTYPFLAKASARLL 128
+ +S ++ WN ++RG S K LS F +M G+ + L+ F + A A L
Sbjct: 171 ESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASAL 230
Query: 129 NQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLD 188
Q G+ HA IK G F++ SL+ MY CG + A +VFD + E+++V W +M+
Sbjct: 231 RQ--GLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIA 288
Query: 189 GYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKM---RAVGPKAN 245
G LAH + R W EA+ +F M + P N
Sbjct: 289 G--------LAH---------NKRQW--------------EALGLFRTMISEEKIYP--N 315
Query: 246 EVTMVSVLCACAHLGALEKGKMMHKYIV--DNGLPLTLVLQTSLVDMYAKCGAIEEALLV 303
V + ++L + AL+ GK +H +++ N + V + L+D+Y KCG + V
Sbjct: 316 SVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFV-HSGLIDLYCKCGDMASGRRV 374
Query: 304 FHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVT 351
F+G +R + + W A++ G A +G +++L MQ G + D VT
Sbjct: 375 FYGSKQR--NAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVT 420
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 155/337 (45%), Gaps = 49/337 (14%)
Query: 23 GCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALS---NSGDIDYSYRAFSQLSSPRI 79
G ++ + + HA+ I +GL F S L S + G + + R F ++ I
Sbjct: 226 GASALRQGLKTHALAIKNGL-----FNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDI 280
Query: 80 FIWNTIIRGYSNSKNPIQSLSIFLKML-RHGLAPDYLTY----PFLAKASARLLNQETGV 134
+W +I G +++K ++L +F M+ + P+ + P L A L +E
Sbjct: 281 VVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKE--- 337
Query: 135 SVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCG 194
VHAH++K+ + +++ +H + ++D Y KCG
Sbjct: 338 -VHAHVLKSKN----YVEQPFVH--------------------------SGLIDLYCKCG 366
Query: 195 EMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLC 254
+M +VF +R+ SW++L+ GY G + +A+ M+ G + + VT+ +VL
Sbjct: 367 DMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLP 426
Query: 255 ACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDV 314
CA L A+++GK +H Y + N + L TSL+ MY+KCG E + +F + +R +V
Sbjct: 427 VCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQR--NV 484
Query: 315 LIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVT 351
W AMI + + + +F+ M + D VT
Sbjct: 485 KAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVT 521
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 97/219 (44%), Gaps = 6/219 (2%)
Query: 218 IDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGL 277
I + + A+ + + + G N T ++L AC +L GK +H +I NGL
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 278 PLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGS--VEESLG 335
L+T LV MY CG++++A VF ++V WNA++ G G ++ L
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFD--ESTSSNVYSWNALLRGTVISGKKRYQDVLS 200
Query: 336 LFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLA 395
F +M+ +G+ + + +++ K G+ S +VD+
Sbjct: 201 TFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYF 260
Query: 396 RAGQLATAYQFICQMPMEPTASMLGALLSGCI-NHRNFE 433
+ G++ A + ++ +E + GA+++G N R +E
Sbjct: 261 KCGKVGLARRVFDEI-VERDIVVWGAMIAGLAHNKRQWE 298
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 178/378 (47%), Gaps = 32/378 (8%)
Query: 56 SALSNSGDIDYSYRAFSQLSSPRI----FIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLA 111
+ L GDID + ++ +I I+ TII N KN +L++F +M G+
Sbjct: 228 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIR 287
Query: 112 PDYLTYPFLAKA---------SARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASC 162
P+ +TY L + ++RLL+ ++ +++ D F++
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE--------- 338
Query: 163 GNIVWAHKVFDSVQEK----NLVSWNSMLDGYAKCGEMVLAHKVFESMSERD----VRSW 214
G +V A K++D + ++ ++ +++S+++G+ + A +FE M +D V ++
Sbjct: 339 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 398
Query: 215 SSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVD 274
++LI G+ KA E M +F +M G N VT +++ G + + + K +V
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Query: 275 NGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRK--TDVLIWNAMIGGLATHGSVEE 332
+G+P ++ + L+D K G +E+AL+VF + K K D+ +N MI G+ G VE+
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Query: 333 SLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVD 392
LF + G+K + + Y GL +EA F + + G P+S Y ++
Sbjct: 519 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR 578
Query: 393 VLARAGQLATAYQFICQM 410
R G A + + I +M
Sbjct: 579 ARLRDGDKAASAELIKEM 596
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 177/384 (46%), Gaps = 19/384 (4%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P +NT+I G +++++ +M+ G PD TY + + + + +S+
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAK 192
+ K E D I ++I + N+ A +F + K N+V++NS++
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 193 CGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKM--RAVGPKANE 246
G A ++ M ER +V ++S+LID +VK G+ EA ++++M R++ P
Sbjct: 303 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI-- 360
Query: 247 VTMVSVLCA-CAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFH 305
T S++ C H L++ K M + ++ +V +L+ + K +EE + +F
Sbjct: 361 FTYSSLINGFCMH-DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 306 GVSKRKT--DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGG 363
+S+R + + +N +I GL G + + +FK M + G+ D +TY G
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Query: 364 LVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPM---EPTASMLG 420
+++A FE L K M P Y M++ + +AG++ + C + + +P +
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539
Query: 421 ALLSGCINHRNFELAEIVGRKLIE 444
++SG E A+ + R++ E
Sbjct: 540 TMISGFCRKGLKEEADALFREMKE 563
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/454 (19%), Positives = 180/454 (39%), Gaps = 55/454 (12%)
Query: 27 MLELKQLHAILITSGLSQDEPFISKV---LCFSALSNSGDIDYSYRAFSQLSSPRI---- 79
+L+LK A+ + + Q P S V SA++ D ++ + RI
Sbjct: 56 LLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDL 115
Query: 80 FIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAH 139
+ +N +I + +L++ KM++ G PD +T L V++
Sbjct: 116 YSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQ 175
Query: 140 IIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAKCGE 195
+ ++ + N+LIH A + D + + +L ++ ++++G K G+
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 235
Query: 196 MVLAHKVFESMS----ERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVS 251
+ LA + + M E DV ++++ID +A+ +F +M G + N VT S
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 295
Query: 252 VLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRK 311
++ + G + +++ + +V ++L+D + K G + EA ++ + KR
Sbjct: 296 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 312 TD-------------------------------------VLIWNAMIGGLATHGSVEESL 334
D V+ +N +I G VEE +
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415
Query: 335 GLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVL 394
LF++M G+ + VTY G A F+ + G+ P Y+ ++D L
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Query: 395 ARAGQLATA---YQFICQMPMEPTASMLGALLSG 425
+ G+L A ++++ + MEP ++ G
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 143/318 (44%), Gaps = 20/318 (6%)
Query: 179 NLVSWNSMLDGYAKCGEMVLAHKVFESMS----ERDVRSWSSLIDGYVKAGEYREAMAVF 234
+L S+N +++ + + ++ LA V M E D+ + SSL++GY EA+A+
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 235 EKMRAVGPKANEVTMVSVLCAC-AHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAK 293
++M + + N VT +++ H A E ++ + +V G L ++V+ K
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDR-MVARGCQPDLFTYGTVVNGLCK 232
Query: 294 CGAIEEALLVFHGVSKRK--TDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVT 351
G I+ AL + + K K DV+I+ +I L + +V ++L LF +M GI+ + VT
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Query: 352 YXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATA---YQFIC 408
Y + G +A + + + P+ ++ ++D + G+L A Y +
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 409 QMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDG-----RYIGLSNVYAGV 463
+ ++P +L++G H + A + + EL D Y L +
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEA----KHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Query: 464 KRWDDARGMREAMERRGV 481
KR ++ + M +RG+
Sbjct: 409 KRVEEGMELFREMSQRGL 426
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 176/369 (47%), Gaps = 14/369 (3%)
Query: 56 SALSNSGDIDYSYRAFSQLSS----PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLA 111
+ L GD D ++ +++ P + I+NTII G K+ +L++F +M G+
Sbjct: 229 NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR 288
Query: 112 PDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKV 171
P+ +TY L + + +I+ D F ++LI + G +V A K+
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348
Query: 172 FDSVQEKNL----VSWNSMLDGYAKCGEMVLAHKVFESMSER----DVRSWSSLIDGYVK 223
+D + ++++ V+++S+++G+ + A ++FE M + DV ++++LI G+ K
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 408
Query: 224 AGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVL 283
E M VF +M G N VT ++ G + + + K +V +G+P ++
Sbjct: 409 YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468
Query: 284 QTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLI--WNAMIGGLATHGSVEESLGLFKDMQ 341
+L+D K G +E+A++VF + + K + I +N MI G+ G VE+ LF ++
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528
Query: 342 AVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLA 401
G+K D V Y G +EA F+ + + G P+S Y ++ R G
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 588
Query: 402 TAYQFICQM 410
+ + I +M
Sbjct: 589 ASAELIKEM 597
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 179/383 (46%), Gaps = 17/383 (4%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P +NT+I G +++++ +M+ G PD +TY + + + + ++
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAK 192
+ + E I N++I ++ A +F ++ K N+V+++S++
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303
Query: 193 CGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKM--RAVGPKANE 246
G A ++ M ER DV ++S+LID +VK G+ EA ++++M R++ P
Sbjct: 304 YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI-- 361
Query: 247 VTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHG 306
VT S++ L++ K M +++V +V +L+ + K +EE + VF
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 307 VSKRKT--DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGL 364
+S+R + + +N +I GL G + + +FK+M + G+ + +TY G
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 365 VKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPM---EPTASMLGA 421
+++A FE L + M P+ Y M++ + +AG++ + C + + +P
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 422 LLSGCINHRNFELAEIVGRKLIE 444
++SG + E A+ + +++ E
Sbjct: 542 MISGFCRKGSKEEADALFKEMKE 564
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/452 (21%), Positives = 186/452 (41%), Gaps = 55/452 (12%)
Query: 29 ELKQLHAILITSGLSQDEPF-----ISKVLCFSALSNSGDIDYSY-RAFSQLSSPRI-FI 81
ELK A+ + + + PF SK+L A N D+ S L P +
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 82 WNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHII 141
++ +I + +L++ KM++ G P+ +T L V++ +
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 142 KTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAKCGEMV 197
TG++ + N+LIH A + D + K +LV++ +++G K G+
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 198 LAHKVFESMS----ERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVT---MV 250
LA + M E V ++++IDG K +A+ +F++M G + N VT ++
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 251 SVLC--------------------------------ACAHLGALEKGKMMHKYIVDNGLP 278
S LC A G L + + ++ +V +
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 279 LTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT--DVLIWNAMIGGLATHGSVEESLGL 336
++V +SL++ + ++EA +F + + DV+ +N +I G + VEE + +
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 337 FKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLAR 396
F++M G+ + VTY G A F+ + G+ P+ Y ++D L +
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Query: 397 AGQLATA---YQFICQMPMEPTASMLGALLSG 425
G+L A ++++ + MEPT ++ G
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 510
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 129/263 (49%), Gaps = 12/263 (4%)
Query: 179 NLVSWNSMLDGYAKCGEMVLAHKVFESMS----ERDVRSWSSLIDGYVKAGEYREAMAVF 234
N +++ +++ + + ++ LA V M E ++ + SSL++GY + EA+A+
Sbjct: 115 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 174
Query: 235 EKMRAVGPKANEVTMVSVLCAC-AHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAK 293
++M G + N VT +++ H A E ++ + +V G LV +V+ K
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDR-MVAKGCQPDLVTYGVVVNGLCK 233
Query: 294 CGAIEEALLVFHGVSKRKTD--VLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVT 351
G + A + + + + K + VLI+N +I GL + ++++L LFK+M+ GI+ + VT
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 352 YXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATA---YQFIC 408
Y + G +A + + + P ++ ++D + G+L A Y +
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 409 QMPMEPTASMLGALLSG-CINHR 430
+ ++P+ +L++G C++ R
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDR 376
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 177/378 (46%), Gaps = 32/378 (8%)
Query: 56 SALSNSGDIDYSYRAFSQLSS----PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLA 111
+ L GDID + ++ P + I+NTII N KN +L++F +M G+
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Query: 112 PDYLTYPFLAKA---------SARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASC 162
P+ +TY L + ++RLL+ ++ +++ D F++
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE--------- 339
Query: 163 GNIVWAHKVFDSVQEK----NLVSWNSMLDGYAKCGEMVLAHKVFESMSERD----VRSW 214
G +V A K++D + ++ ++ +++S+++G+ + A +FE M +D V ++
Sbjct: 340 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 399
Query: 215 SSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVD 274
++LI G+ KA E M +F +M G N VT +++ + +++ K +V
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459
Query: 275 NGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGV--SKRKTDVLIWNAMIGGLATHGSVEE 332
+G+ ++ + L+D G +E AL+VF + SK + D+ +N MI G+ G VE+
Sbjct: 460 DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519
Query: 333 SLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVD 392
LF + G+K + VTY GL +EA F + + G P S Y ++
Sbjct: 520 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIR 579
Query: 393 VLARAGQLATAYQFICQM 410
R G A + + I +M
Sbjct: 580 AHLRDGDKAASAELIREM 597
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 175/389 (44%), Gaps = 17/389 (4%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P F +NT+I G +++++ +M+ G PD +TY + + + + +S+
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAK 192
+ + E I N++I + N+ A +F + K N+V++NS++
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 193 CGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKM--RAVGPKANE 246
G A ++ M ER +V ++S+LID +VK G+ EA ++++M R++ P
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI-- 361
Query: 247 VTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHG 306
T S++ L++ K M + ++ +V +L+ + K ++E + +F
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 307 VSKRKT--DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGL 364
+S+R + + + +I G + + +FK M + G+ D +TY + G
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 365 VKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPM---EPTASMLGA 421
V+ A FE L + M P Y M++ + +AG++ + C + + +P
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 422 LLSGCINHRNFELAEIVGRKLIELEPDHD 450
++SG E A+ + R++ E P D
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLPD 570
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/444 (21%), Positives = 187/444 (42%), Gaps = 26/444 (5%)
Query: 29 ELKQLHAILITSGLSQDEPF-----ISKVLCFSALSNSGDIDYSYRAFSQLS----SPRI 79
+LK A+ + + + PF SK+L SA++ D Q+ S +
Sbjct: 59 DLKLDDAVNLFGDMVKSRPFPSIVEFSKLL--SAIAKMNKFDLVISLGEQMQNLGISHNL 116
Query: 80 FIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAH 139
+ ++ +I + +L++ KM++ G PD +T L VS+
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 140 IIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAKCGE 195
+++ G++ D F N+LIH A + D + K +LV++ +++G K G+
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 196 MVLAHKVFESMS----ERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVS 251
+ LA + + M E V ++++ID +A+ +F +M G + N VT S
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 252 VLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRK 311
++ + G + +++ + +V ++L+D + K G + EA ++ + KR
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 312 T--DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAW 369
D+ ++++I G H ++E+ +F+ M + + VTY V E
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 370 HFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPME---PTASMLGALLSGC 426
F + + G+ ++ Y ++ +A + A QM + P LL G
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGL 476
Query: 427 INHRNFELAEIVGRKL--IELEPD 448
N+ E A +V L ++EPD
Sbjct: 477 CNNGKVETALVVFEYLQRSKMEPD 500
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 178/378 (47%), Gaps = 32/378 (8%)
Query: 56 SALSNSGDIDYSYRAFSQLSSPRI----FIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLA 111
+ L G+ D + +++ +I I++T+I ++ +L++F +M G+
Sbjct: 213 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIR 272
Query: 112 PDYLTYPFLAKA---------SARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASC 162
PD TY L ++RLL+ ++ +++ NSLI +A
Sbjct: 273 PDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTF---------NSLIDAFAKE 323
Query: 163 GNIVWAHKVFDSVQEK----NLVSWNSMLDGYAKCGEMVLAHKVFESMSERD----VRSW 214
G ++ A K+FD + ++ N+V++NS+++G+ + A ++F M +D V ++
Sbjct: 324 GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 383
Query: 215 SSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVD 274
++LI+G+ KA + + M +F M G N VT +++ + +M+ K +V
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS 443
Query: 275 NGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRK--TDVLIWNAMIGGLATHGSVEE 332
+G+ ++ +L+D K G +E+A++VF + K K D+ +N M G+ G VE+
Sbjct: 444 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVED 503
Query: 333 SLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVD 392
LF + G+K D + Y GL +EA+ F + + G P S Y ++
Sbjct: 504 GWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIR 563
Query: 393 VLARAGQLATAYQFICQM 410
R G A + + I +M
Sbjct: 564 AHLRDGDKAASAELIKEM 581
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 162/365 (44%), Gaps = 19/365 (5%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P + T++ G +++++ +M+ G PD +TY + + + +++
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAK 192
+ K E D I +++I ++ A +F + K ++ +++S++
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 287
Query: 193 CGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKM--RAVGPKANE 246
G A ++ M ER +V +++SLID + K G+ EA +F++M R++ P N
Sbjct: 288 YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP--NI 345
Query: 247 VTMVSVLCA-CAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFH 305
VT S++ C H E ++ + + LP +V +L++ + K + + + +F
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP-DVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 306 GVSKRKT--DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGG 363
+S+R + + + +I G + + +FK M + G+ + +TY G
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 364 LVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPM---EPTASMLG 420
+++A FE L K M P Y M + + +AG++ + C + + +P
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524
Query: 421 ALLSG 425
++SG
Sbjct: 525 TMISG 529
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 187/424 (44%), Gaps = 39/424 (9%)
Query: 5 SPSFKIANLNQTLLS-LLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGD 63
S SF ++ LL+ L M +K++HA+ + Q F + ++ S+ GD
Sbjct: 75 SSSFDSERVDYALLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLI--SSCVRLGD 132
Query: 64 IDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLA-PDYLTYPFLAK 122
+ Y+ + F + W +I GY ++ ++F ++HG+ + + L
Sbjct: 133 LVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLN 192
Query: 123 ASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVS 182
+R E G VH +++K G NL+
Sbjct: 193 LCSRRAEFELGRQVHGNMVKVG--------------------------------VGNLIV 220
Query: 183 WNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGP 242
+S++ YA+CGE+ A + F+ M E+DV SW+++I + G +A+ +F M
Sbjct: 221 ESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWF 280
Query: 243 KANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALL 302
NE T+ S+L AC+ AL G+ +H +V + + + TSL+DMYAKCG I +
Sbjct: 281 LPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRK 340
Query: 303 VFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHG 362
VF G+S R T + W ++I A G EE++ LF+ M+ + A+ +T
Sbjct: 341 VFDGMSNRNT--VTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSV 398
Query: 363 GLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGAL 422
G + + K + + + +V + + G+ A+ + Q+P S A+
Sbjct: 399 GALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWT-AM 457
Query: 423 LSGC 426
+SGC
Sbjct: 458 ISGC 461
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 155/340 (45%), Gaps = 38/340 (11%)
Query: 16 TLLSLLDGC---KSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
T+ S+L C K++ +Q+H++++ + D F+ L + G+I + F
Sbjct: 286 TVCSILKACSEEKALRFGRQVHSLVVKRMIKTD-VFVGTSL-MDMYAKCGEISDCRKVFD 343
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
+S+ W +II ++ +++S+F M R L + LT + +A +
Sbjct: 344 GMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLL 403
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAK 192
G +HA IIK E + +I ++L VW Y K
Sbjct: 404 GKELHAQIIKNSIEKNVYIGSTL----------VWL---------------------YCK 432
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
CGE A V + + RDV SW+++I G G EA+ ++M G + N T S
Sbjct: 433 CGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSA 492
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT 312
L ACA+ +L G+ +H N + + ++L+ MYAKCG + EA VF + ++
Sbjct: 493 LKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEK-- 550
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
+++ W AMI G A +G E+L L M+A G + D+ +
Sbjct: 551 NLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIF 590
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 104/189 (55%), Gaps = 8/189 (4%)
Query: 10 IANLNQTLLSLLDGCKSMLEL---KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDY 66
IAN N T++S+L C S+ L K+LHA +I + + ++ +I L + G+
Sbjct: 382 IAN-NLTVVSILRACGSVGALLLGKELHAQIIKNSIEKN-VYIGSTLVW-LYCKCGESRD 438
Query: 67 SYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASAR 126
++ QL S + W +I G S+ + ++L +M++ G+ P+ TY KA A
Sbjct: 439 AFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACAN 498
Query: 127 LLNQETGVSVHAHIIKTGHEYDR-FIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNS 185
+ G S+H+ I K H F+ ++LIHMYA CG + A +VFDS+ EKNLVSW +
Sbjct: 499 SESLLIGRSIHS-IAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKA 557
Query: 186 MLDGYAKCG 194
M+ GYA+ G
Sbjct: 558 MIMGYARNG 566
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 174/369 (47%), Gaps = 14/369 (3%)
Query: 56 SALSNSGDIDYSYRAFSQLSSPRI----FIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLA 111
+ L GDID ++ +++ + +I I+NTII ++ +L++F +M G+
Sbjct: 158 NGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 217
Query: 112 PDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKV 171
P+ +TY L + + +I+ + N+LI + G V A K+
Sbjct: 218 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 277
Query: 172 FDSVQEK----NLVSWNSMLDGYAKCGEMVLAHKVFESMSERD----VRSWSSLIDGYVK 223
D + ++ ++ ++NS+++G+ + A ++FE M +D + ++++LI G+ K
Sbjct: 278 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337
Query: 224 AGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVL 283
+ + +F +M G + VT +++ H G + + + K +V +G+P ++
Sbjct: 338 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 397
Query: 284 QTSLVDMYAKCGAIEEALLVFHGVSKR--KTDVLIWNAMIGGLATHGSVEESLGLFKDMQ 341
+ L+D G +E+AL VF + K K D+ I+ MI G+ G V++ LF +
Sbjct: 398 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 457
Query: 342 AVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLA 401
G+K + VTY L++EA+ + + + G P S Y ++ R G A
Sbjct: 458 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKA 517
Query: 402 TAYQFICQM 410
+ + I +M
Sbjct: 518 ASAELIREM 526
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 186/423 (43%), Gaps = 22/423 (5%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P + T+I G +++++ +M++ G P+ +TY + + + + ++
Sbjct: 113 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 172
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAK 192
+ E D I N++I ++ A +F ++ K N+V+++S++
Sbjct: 173 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 232
Query: 193 CGEMVLAHKVFESMSERDVR----SWSSLIDGYVKAGEYREAMAVFEKM--RAVGPKANE 246
G A ++ M E+ + ++++LID +VK G++ EA + + M R++ P
Sbjct: 233 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDI-- 290
Query: 247 VTMVSVLCA-CAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFH 305
T S++ C H L+K K M +++V L +L+ + K +E+ +F
Sbjct: 291 FTYNSLINGFCMH-DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFR 349
Query: 306 GVSKRKT--DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGG 363
+S R D + + +I GL G + + +FK M + G+ D +TY + G
Sbjct: 350 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 409
Query: 364 LVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPM---EPTASMLG 420
+++A F+ + K + Y M++ + +AG++ + C + + +P
Sbjct: 410 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 469
Query: 421 ALLSGCINHRNFELAEIVGRKLIELEPDHD-GRYIGLSNVYAGVKRWDDARGMREAMERR 479
++SG + R + A + +K+ E P D G Y L + A ++ D A E R
Sbjct: 470 TMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTL--IRAHLRDGDKAASAELIREMR 527
Query: 480 GVK 482
+
Sbjct: 528 SCR 530
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/410 (21%), Positives = 155/410 (37%), Gaps = 82/410 (20%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P IF +N ++ + K +S+ KM R G++ + TY L R +++
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQE------------------- 177
++K G+E +SL++ Y I A + D + E
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 178 --------------------KNLVSWNSMLDGYAKCGEMVLAHKVFESMS----ERDVRS 213
NLV++ +++G K G++ LA + M E DV
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 214 WSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVL-CACAHLGALEKGKMMHKYI 272
++++ID K +A+ +F++M G + N VT S++ C C++ G + +
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY-GRWSDASQLLSDM 246
Query: 273 VDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT--DVLIWNAMIGGLATHG-- 328
++ + LV +L+D + K G EA + + KR D+ +N++I G H
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 329 ---------------------------------SVEESLGLFKDMQAVGIKADEVTYXXX 355
VE+ LF++M G+ D VTY
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 356 XXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQ 405
H G A F+ + G+ P Y+ ++D L G+L A +
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 416
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 177/355 (49%), Gaps = 11/355 (3%)
Query: 79 IFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVS-VH 137
++ ++ +I Y S +++S+F M +GL P+ +TY + A + + V+
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 138 AHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQ----EKNLVSWNSMLDGYAKC 193
+ + G + DR NSL+ + + G A +FD + E+++ S+N++LD K
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 194 GEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTM 249
G+M LA ++ M + +V S+S++IDG+ KAG + EA+ +F +MR +G + V+
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY 447
Query: 250 VSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSK 309
++L +G E+ + + + G+ +V +L+ Y K G +E VF + +
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
Query: 310 RKT--DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKE 367
++L ++ +I G + G +E++ +F++ ++ G++AD V Y GLV
Sbjct: 508 EHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGS 567
Query: 368 AWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGAL 422
A + + K G++P+ Y ++D R+ + + + + ++S L AL
Sbjct: 568 AVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSAL 622
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 139/304 (45%), Gaps = 24/304 (7%)
Query: 16 TLLSLLDGC-KSMLELKQLHAI---LITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAF 71
T +++D C K +E KQ+ + +G+ D + +L + S G + + F
Sbjct: 305 TYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL--AVCSRGGLWEAARNLF 362
Query: 72 SQLSSPRI----FIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARL 127
++++ RI F +NT++ + I +M + P+ ++Y + A+
Sbjct: 363 DEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKA 422
Query: 128 LNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQE-------KNL 180
+ +++ + G DR N+L+ +Y G + + D ++E K++
Sbjct: 423 GRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGR---SEEALDILREMASVGIKKDV 479
Query: 181 VSWNSMLDGYAKCGEMVLAHKVFESMSERDVR----SWSSLIDGYVKAGEYREAMAVFEK 236
V++N++L GY K G+ KVF M V ++S+LIDGY K G Y+EAM +F +
Sbjct: 480 VTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFRE 539
Query: 237 MRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGA 296
++ G +A+ V +++ A G + + + G+ +V S++D + +
Sbjct: 540 FKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSAT 599
Query: 297 IEEA 300
++ +
Sbjct: 600 MDRS 603
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 108/251 (43%), Gaps = 28/251 (11%)
Query: 249 MVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVS 308
M+S L G + K + + G T+ ++L+ Y + G EEA+ VF+ +
Sbjct: 239 MISTL---GRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMK 295
Query: 309 KR--KTDVLIWNAMIGGLATHG-SVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLV 365
+ + +++ +NA+I G ++ F +MQ G++ D +T+ GGL
Sbjct: 296 EYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLW 355
Query: 366 KEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPME---PTASMLGAL 422
+ A + F+ + + Y ++D + + GQ+ A++ + QMP++ P +
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 423 LSGCINHRNFELAEIVGRKLIELEPDHDGRYIGLS----------NVYAGVKRWDDARGM 472
+ G F+ A L + RY+G++ ++Y V R ++A +
Sbjct: 416 IDGFAKAGRFDEA---------LNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI 466
Query: 473 REAMERRGVKK 483
M G+KK
Sbjct: 467 LREMASVGIKK 477
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 174/369 (47%), Gaps = 14/369 (3%)
Query: 56 SALSNSGDIDYSYRAFSQLSSPRI----FIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLA 111
+ L GD D + +++ + +I I+NTII ++ +L++F +M G+
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 112 PDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKV 171
P+ +TY L + + +I+ + N+LI + G V A K+
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 172 FDSVQEK----NLVSWNSMLDGYAKCGEMVLAHKVFESMSERD----VRSWSSLIDGYVK 223
+D + ++ ++ ++NS+++G+ + A ++FE M +D V ++++LI G+ K
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 224 AGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVL 283
+ + +F +M G + VT +++ H G + + + K +V +G+P ++
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 472
Query: 284 QTSLVDMYAKCGAIEEALLVFHGVSKR--KTDVLIWNAMIGGLATHGSVEESLGLFKDMQ 341
+ L+D G +E+AL VF + K K D+ I+ MI G+ G V++ LF +
Sbjct: 473 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 532
Query: 342 AVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLA 401
G+K + VTY L++EA+ + + + G P+S Y ++ R G A
Sbjct: 533 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKA 592
Query: 402 TAYQFICQM 410
+ + I +M
Sbjct: 593 ASAELIREM 601
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 176/387 (45%), Gaps = 19/387 (4%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P + T+I G +++++ +M++ G P+ +TY + + + + +++
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 247
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAK 192
+ E D I N++I ++ A +F ++ K N+V+++S++
Sbjct: 248 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 307
Query: 193 CGEMVLAHKVFESMSERDVR----SWSSLIDGYVKAGEYREAMAVFEKM--RAVGPKANE 246
G A ++ M E+ + ++++LID +VK G++ EA +++ M R++ P
Sbjct: 308 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI-- 365
Query: 247 VTMVSVLCA-CAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFH 305
T S++ C H L+K K M +++V +V +L+ + K +E+ +F
Sbjct: 366 FTYNSLVNGFCMH-DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424
Query: 306 GVSKRKT--DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGG 363
+S R D + + +I GL G + + +FK M + G+ D +TY + G
Sbjct: 425 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 484
Query: 364 LVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPM---EPTASMLG 420
+++A F+ + K + Y M++ + +AG++ + C + + +P
Sbjct: 485 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 544
Query: 421 ALLSGCINHRNFELAEIVGRKLIELEP 447
++SG + R + A + +K+ E P
Sbjct: 545 TMISGLCSKRLLQEAYALLKKMKEDGP 571
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 84/408 (20%), Positives = 156/408 (38%), Gaps = 50/408 (12%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P I +N ++ + K +S+ KM R + TY L R +++
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQE------------------- 177
++K G+E +SL++ Y I A + D + E
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 178 --------------------KNLVSWNSMLDGYAKCGEMVLAHKVFESMS----ERDVRS 213
NLV++ +++G K G+ LA + M E DV
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 214 WSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVL-CACAHLGALEKGKMMHKYI 272
++++ID K +A+ +F++M G + N VT S++ C C++ G + +
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY-GRWSDASQLLSDM 321
Query: 273 VDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT--DVLIWNAMIGGLATHGSV 330
++ + LV +L+D + K G EA ++ + KR D+ +N+++ G H +
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381
Query: 331 EESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACM 390
+++ +F+ M + D VTY V++ F + G+ + Y +
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 391 VDVLARAGQLATAYQFICQMPME---PTASMLGALLSGCINHRNFELA 435
+ L G A + QM + P LL G N+ E A
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 489
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 144/314 (45%), Gaps = 14/314 (4%)
Query: 180 LVSWNSMLDGYAKCGEMVLAHKVFESMS----ERDVRSWSSLIDGYVKAGEYREAMAVFE 235
L ++N +++ + + ++ LA + M E + + SSL++GY +A+A+ +
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 236 KMRAVGPKANEVTMVSVLCAC-AHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKC 294
+M +G + + +T +++ H A E ++ + +V G LV +V+ K
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDR-MVQRGCQPNLVTYGVVVNGLCKR 238
Query: 295 GAIEEALLVFHGV--SKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
G + AL + + + +K + DV+I+N +I L + V+++L LFK+M+ GI+ + VTY
Sbjct: 239 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298
Query: 353 XXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATA---YQFICQ 409
G +A + + + P+ + ++D + G+ A Y + +
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 410 MPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELE--PDHDGRYIGLSNVYAGVKRWD 467
++P +L++G H + A+ + ++ + PD Y L + KR +
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDV-VTYNTLIKGFCKSKRVE 417
Query: 468 DARGMREAMERRGV 481
D + M RG+
Sbjct: 418 DGTELFREMSHRGL 431
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 156/345 (45%), Gaps = 11/345 (3%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P + + +I G P +L++ KM + + D + Y + + + + +
Sbjct: 213 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDL 272
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKN----LVSWNSMLDGYAK 192
+ G + D F N LI + G A ++ + EKN LV +N+++D + K
Sbjct: 273 FNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVK 332
Query: 193 CGEMVLAHKVFESMSER-----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEV 247
G++V A K+++ M + DV ++++LI G+ K E M VF +M G N V
Sbjct: 333 EGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 392
Query: 248 TMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGV 307
T +++ + +M+ K +V +G+ ++ L+D G +E AL+VF +
Sbjct: 393 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYM 452
Query: 308 SKR--KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLV 365
KR K D++ + MI L G VE+ LF + G+K + VTY GL
Sbjct: 453 QKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK 512
Query: 366 KEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQM 410
+EA F + + G P+S Y ++ R G A + + I +M
Sbjct: 513 EEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/459 (20%), Positives = 182/459 (39%), Gaps = 60/459 (13%)
Query: 25 KSMLELKQLHAILITSGLSQDEPF-----ISKVLCFSALSNSGDIDYSYRAFSQLS---- 75
K + +LK AI + + + PF SK+L SA++ D Q+
Sbjct: 49 KVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLL--SAIAKMNKFDLVISLGEQMQNLGI 106
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVS 135
S ++ ++ I + +L+I KM++ G P +T L V+
Sbjct: 107 SHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 166
Query: 136 VHAHIIKTGHEYDRFIQNSLIHMY----ASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYA 191
+ +++ G++ D +L+H + + ++ + +LV++ ++++G
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 226
Query: 192 KCGEMVLAHKVFESMS----ERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEV 247
K GE LA + M E DV ++++IDG K +A +F KM G K +
Sbjct: 227 KRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 286
Query: 248 TMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGV 307
T ++ + G + +++ + LV +L+D + K G + EA ++ +
Sbjct: 287 TYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346
Query: 308 SKRK---TDVLIWNAMIGGLATHGSVEESLGLFKDM------------------------ 340
K K DV+ +N +I G + VEE + +F++M
Sbjct: 347 VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 341 ---------QAV--GIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYAC 389
Q V G+ D +TY + G V+ A FE + K M Y
Sbjct: 407 CDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTT 466
Query: 390 MVDVLARAGQLATAYQFICQMPM---EPTASMLGALLSG 425
M++ L +AG++ + C + + +P ++SG
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 505
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 168/375 (44%), Gaps = 14/375 (3%)
Query: 50 SKVLCFSALSNSGDIDYSYRAFSQLS----SPRIFIWNTIIRGYSNSKNPIQSLSIFLKM 105
S + L G+++ S + + S P + +NTII Y ++ + M
Sbjct: 226 SLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVM 285
Query: 106 LRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNI 165
+ G+ + +TY L + S + + + + G E D + SLI GN+
Sbjct: 286 KKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNM 345
Query: 166 VWAHKVFDSVQEKNL----VSWNSMLDGYAKCGEMVLAHKVFESMSERDVR----SWSSL 217
A +FD + EK L ++ +++DG K GEM A + M + V +++L
Sbjct: 346 KRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTL 405
Query: 218 IDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGL 277
IDGY + G EA +++ M G +A+ T ++ L ++ K +++ G+
Sbjct: 406 IDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGV 465
Query: 278 PLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR--KTDVLIWNAMIGGLATHGSVEESLG 335
L+ V T+L+D+Y K G +EEA +F +S + + + + +N MI G ++E+
Sbjct: 466 KLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARK 525
Query: 336 LFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLA 395
L +M+A G+ D TY V EA F + G+ +S Y M+ L+
Sbjct: 526 LRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLS 585
Query: 396 RAGQLATAYQFICQM 410
+AG+ A+ +M
Sbjct: 586 KAGKSDEAFGLYDEM 600
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 94/223 (42%), Gaps = 5/223 (2%)
Query: 221 YVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLT 280
YV G + E + VF+ M G +E + + L A ++ + + +VD+G+ +T
Sbjct: 164 YVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKIT 223
Query: 281 LVLQTSLVDMYAKCGAIEEA--LLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFK 338
+ T +V+ + G +E++ L+ V K + +N +I G+ K
Sbjct: 224 VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLK 283
Query: 339 DMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAG 398
M+ G+ ++VTY G + +A F+ + + G+ Y ++ R G
Sbjct: 284 VMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKG 343
Query: 399 QLATAYQFICQMP---MEPTASMLGALLSGCINHRNFELAEIV 438
+ A+ ++ + P++ GAL+ G AEI+
Sbjct: 344 NMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEIL 386
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 190/426 (44%), Gaps = 31/426 (7%)
Query: 4 VSPSFKIANLNQTLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSG- 62
S F + + + LSL+D S++ L Q H F+ VL ++A+ ++
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHG------------FMPGVLSYNAVLDATI 180
Query: 63 ----DIDYSYRAFSQL----SSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDY 114
+I ++ F ++ SP +F +N +IRG+ + N +L++F KM G P+
Sbjct: 181 RSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNV 240
Query: 115 LTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDS 174
+TY L +L + G + + G E + N +I+ G + V
Sbjct: 241 VTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTE 300
Query: 175 VQEK----NLVSWNSMLDGYAKCGE----MVLAHKVFESMSERDVRSWSSLIDGYVKAGE 226
+ + + V++N+++ GY K G +V+ ++ V +++SLI KAG
Sbjct: 301 MNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGN 360
Query: 227 YREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTS 286
AM ++MR G NE T +++ + G + + + + + DNG ++V +
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 420
Query: 287 LVDMYAKCGAIEEALLVFHGVSKR--KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVG 344
L++ + G +E+A+ V + ++ DV+ ++ ++ G V+E+L + ++M G
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 345 IKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAY 404
IK D +TY KEA +E + + G+ P Y +++ G L A
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540
Query: 405 QFICQM 410
Q +M
Sbjct: 541 QLHNEM 546
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 183/433 (42%), Gaps = 72/433 (16%)
Query: 82 WNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYP-----------------FLAKAS 124
+NT+I+GY N Q+L + +MLRHGL P +TY FL +
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 125 ARLL--NQETGVSVHAHIIKTGH--EYDRFIQ--------------NSLIHMYASCGNIV 166
R L N+ T ++ + G+ E R ++ N+LI+ + G +
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 167 WAHKVFDSVQEKNL----VSWNSMLDGYAKCGEMVLAHKVFESMSER----DVRSWSSLI 218
A V + ++EK L VS++++L G+ + ++ A +V M E+ D ++SSLI
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 219 DGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLP 278
G+ + +EA ++E+M VG +E T +++ A G LEK +H +V+ G+
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Query: 279 LTLVLQTSLVDMYAKCGAIEEA---LLVFHGVSKRKTDV----LIWN----------AMI 321
+V + L++ K EA LL +DV LI N ++I
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLI 612
Query: 322 GGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMT 381
G G + E+ +F+ M K D Y G +++A+ ++ + K G
Sbjct: 613 KGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFL 672
Query: 382 PSSEHYACMVDVLARAGQLATAYQFI------CQMPMEPTASMLGALLSGCINHRNFELA 435
+ +V L + G++ I C++ A +L INHR +
Sbjct: 673 LHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVE-----INHREGNM- 726
Query: 436 EIVGRKLIELEPD 448
++V L E+ D
Sbjct: 727 DVVLDVLAEMAKD 739
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 122/287 (42%), Gaps = 31/287 (10%)
Query: 44 QDEPFISKVLCFSALSN----SGDIDYSYRAFSQLS----SPRIFIWNTIIRGYSNSKNP 95
D F V+ ++AL N +G ++ + + SP + ++T++ G+ S +
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 96 IQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSL 155
++L + +M+ G+ PD +TY L + + ++ +++ G D F +L
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL 526
Query: 156 IHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAKCGEM--------------- 196
I+ Y G++ A ++ + + EK ++V+++ +++G K
Sbjct: 527 INAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEES 586
Query: 197 ----VLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
V H + E+ S + +S SLI G+ G EA VFE M K + +
Sbjct: 587 VPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIM 646
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEE 299
+ G + K ++K +V +G L V +LV K G + E
Sbjct: 647 IHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 139/362 (38%), Gaps = 61/362 (16%)
Query: 154 SLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMV-LAHKVFESMSER--- 209
SLI S ++ AH V +S+N++LD + + A VF+ M E
Sbjct: 148 SLIDKALSIVHLAQAHGFMPGV-----LSYNAVLDATIRSKRNISFAENVFKEMLESQVS 202
Query: 210 -DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMM 268
+V +++ LI G+ AG A+ +F+KM G N VT
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTY------------------- 243
Query: 269 HKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR--KTDVLIWNAMIGGLAT 326
+L+D Y K I++ + ++ + + +++ +N +I GL
Sbjct: 244 ----------------NTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCR 287
Query: 327 HGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEH 386
G ++E + +M G DEVTY G +A + + G+TPS
Sbjct: 288 EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVIT 347
Query: 387 YACMVDVLARAGQLATAYQFICQMPME---PTASMLGALLSGCINHRNFELAEIVGRKLI 443
Y ++ + +AG + A +F+ QM + P L+ G A V R
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLR--- 404
Query: 444 ELEPDHDG------RYIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGFSSVEICGVSR 497
E + +G Y L N + + +DA + E M+ +G+ S + G R
Sbjct: 405 --EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 462
Query: 498 RF 499
+
Sbjct: 463 SY 464
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 164/343 (47%), Gaps = 14/343 (4%)
Query: 56 SALSNSGDIDYSYRAFSQLSSPRI----FIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLA 111
+ L GDID ++ +++ + +I I++T+I ++ +L++F +M G+
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 112 PDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKV 171
P+ +TY L + + +I+ + N+LI + G +V A K+
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352
Query: 172 FDSVQEK----NLVSWNSMLDGYAKCGEMVLAHKVFESMSERD----VRSWSSLIDGYVK 223
+D + ++ ++ +++S+++G+ + A +FE M +D V ++++LI+G+ K
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412
Query: 224 AGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVL 283
A E + +F +M G N VT +++ + +M+ K +V +G+ ++
Sbjct: 413 AKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMT 472
Query: 284 QTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLI--WNAMIGGLATHGSVEESLGLFKDMQ 341
+L+D K G +E+A++VF + + K + I +N MI G+ G VE+ LF +
Sbjct: 473 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLS 532
Query: 342 AVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSS 384
G+K D + Y GL +EA F + + G P S
Sbjct: 533 LKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/433 (19%), Positives = 167/433 (38%), Gaps = 85/433 (19%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P IF +N ++ + K +S+ KM R G++ + TY L R +++
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQE------------------- 177
++K G+E +SL++ Y I A + D + E
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 178 --------------------KNLVSWNSMLDGYAKCGEMVLAHKVFESMS----ERDVRS 213
NLV++ +++G K G++ LA + M E +V
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 214 WSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVL-CACAHLGALEKGKMMHKYI 272
+S++ID K +A+ +F +M G + N +T S++ C C + + +++ +
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSD-M 321
Query: 273 VDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTD------------------- 313
++ + +V +L+D + K G + EA ++ + KR D
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381
Query: 314 ------------------VLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXX 355
V+ +N +I G ++E + LF++M G+ + VTY
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 356 XXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATA---YQFICQMPM 412
A F+ + G+ P+ Y ++D L + G+L A ++++ + M
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Query: 413 EPTASMLGALLSG 425
EPT ++ G
Sbjct: 502 EPTIYTYNIMIEG 514
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 171/378 (45%), Gaps = 32/378 (8%)
Query: 56 SALSNSGDIDYSYRAFSQLSSPRI----FIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLA 111
+ L GDID + ++ +I I+NTII G K+ +L++F +M G+
Sbjct: 231 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 290
Query: 112 PDYLTYPFLAKA---------SARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASC 162
PD TY L ++RLL+ ++ +++ D F++
Sbjct: 291 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE--------- 341
Query: 163 GNIVWAHKVFDSVQEK----NLVSWNSMLDGYAKCGEMVLAHKVFESMSERD----VRSW 214
G +V A K++D + ++ ++ +++S+++G+ + A +FE M +D V ++
Sbjct: 342 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 401
Query: 215 SSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVD 274
S+LI G+ KA E M +F +M G N VT +++ + +M+ K +V
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 461
Query: 275 NGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGV--SKRKTDVLIWNAMIGGLATHGSVEE 332
G+ ++ L+D K G + +A++VF + S + D+ +N MI G+ G VE+
Sbjct: 462 VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVED 521
Query: 333 SLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVD 392
LF ++ G+ + + Y G +EA + + + G P+S Y ++
Sbjct: 522 GWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIR 581
Query: 393 VLARAGQLATAYQFICQM 410
R G + + I +M
Sbjct: 582 ARLRDGDREASAELIKEM 599
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 176/386 (45%), Gaps = 17/386 (4%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P F + T+I G +++++ +M++ G PD +TY + + + + +S+
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAK 192
+ K E D I N++I ++ A +F + K ++ +++S++
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 305
Query: 193 CGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKM--RAVGPKANE 246
G A ++ M ER +V ++S+LID +VK G+ EA ++++M R++ P
Sbjct: 306 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI-- 363
Query: 247 VTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHG 306
T S++ L++ K M + ++ +V ++L+ + K +EE + +F
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
Query: 307 VSKRKT--DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGL 364
+S+R + + + +I G + + +FK M +VG+ + +TY G
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483
Query: 365 VKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPME---PTASMLGA 421
+ +A FE L + M P Y M++ + +AG++ ++ C + ++ P
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNT 543
Query: 422 LLSGCINHRNFELAEIVGRKLIELEP 447
++SG + E A+ + +K+ E P
Sbjct: 544 MISGFCRKGSKEEADSLLKKMKEDGP 569
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/395 (19%), Positives = 163/395 (41%), Gaps = 48/395 (12%)
Query: 79 IFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHA 138
++ ++ I + +L++ KM++ G PD +T L V++
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177
Query: 139 HIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAKCG 194
+++ G++ D F +LIH A + D + ++ +LV++ ++++G K G
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 195 EMVLAHKVFESMS----ERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMV 250
++ LA + + M E DV ++++IDG K +A+ +F +M G + + T
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYS 297
Query: 251 SVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR 310
S++ + G + +++ + +V ++L+D + K G + EA ++ + KR
Sbjct: 298 SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
Query: 311 KTD-------------------------------------VLIWNAMIGGLATHGSVEES 333
D V+ ++ +I G VEE
Sbjct: 358 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEG 417
Query: 334 LGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDV 393
+ LF++M G+ + VTY A F+ + G+ P+ Y ++D
Sbjct: 418 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 477
Query: 394 LARAGQLATA---YQFICQMPMEPTASMLGALLSG 425
L + G+LA A ++++ + MEP ++ G
Sbjct: 478 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 512
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 141/317 (44%), Gaps = 18/317 (5%)
Query: 179 NLVSWNSMLDGYAKCGEMVLAHKVFESMS----ERDVRSWSSLIDGYVKAGEYREAMAVF 234
+L +++ ++ + + ++ LA V M E D+ + SSL++GY + +A+A+
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 235 EKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKC 294
++M +G K + T +++ + + +V G LV ++V+ K
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 295 GAIEEALLVFHGVSKRK--TDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
G I+ AL + + K K DV+I+N +I GL + ++++L LF +M GI+ D TY
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 353 XXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATA---YQFICQ 409
+ G +A + + + P+ ++ ++D + G+L A Y + +
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
Query: 410 MPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDG-----RYIGLSNVYAGVK 464
++P +L++G H + A + + EL D Y L + K
Sbjct: 357 RSIDPDIFTYSSLINGFCMHDRLDEA----KHMFELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 465 RWDDARGMREAMERRGV 481
R ++ + M +RG+
Sbjct: 413 RVEEGMELFREMSQRGL 429
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 147/302 (48%), Gaps = 13/302 (4%)
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNL----VSWNSMLDGYAK 192
+ I+ G + ++ N L++ + GNI A KVFD + +++L VS+N++++GY K
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCK 287
Query: 193 CGEM----VLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVT 248
G + L H++ +S + DV ++S+LI+ K + A +F++M G N+V
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI 347
Query: 249 MVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVS 308
+++ + G ++ K ++ ++ GL +VL +LV+ + K G + A + G+
Sbjct: 348 FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407
Query: 309 KR--KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVK 366
+R + D + + +I G G VE +L + K+M GI+ D V + G V
Sbjct: 408 RRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVI 467
Query: 367 EAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPME---PTASMLGALL 423
+A + + G+ P Y M+D + G T ++ + +M + P+ LL
Sbjct: 468 DAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLL 527
Query: 424 SG 425
+G
Sbjct: 528 NG 529
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 152/329 (46%), Gaps = 24/329 (7%)
Query: 45 DEPFISKVLCFSALSNS----GDIDYSYRAFSQLS----SPRIFIWNTIIRGYSNSKNPI 96
D F V F+ L N G+I + + F +++ P + +NT+I GY N
Sbjct: 233 DAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLD 292
Query: 97 QSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLI 156
+ + +M + PD TY L A + + + + K G + I +LI
Sbjct: 293 EGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLI 352
Query: 157 HMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVR 212
H ++ G I + + + K ++V +N++++G+ K G++V A + + M R +R
Sbjct: 353 HGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLR 412
Query: 213 ----SWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMM 268
++++LIDG+ + G+ A+ + ++M G + + V +++C G + +
Sbjct: 413 PDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERA 472
Query: 269 HKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTD-----VLIWNAMIGG 323
+ ++ G+ V T ++D + K G +A F + + ++D V+ +N ++ G
Sbjct: 473 LREMLRAGIKPDDVTYTMMMDAFCKKG---DAQTGFKLLKEMQSDGHVPSVVTYNVLLNG 529
Query: 324 LATHGSVEESLGLFKDMQAVGIKADEVTY 352
L G ++ + L M +G+ D++TY
Sbjct: 530 LCKLGQMKNADMLLDAMLNIGVVPDDITY 558
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 100/207 (48%), Gaps = 12/207 (5%)
Query: 59 SNSGDIDYSYRAFSQLSS----PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDY 114
S +G+ID ++ ++ S P I ++NT++ G+ + + + + +I M+R GL PD
Sbjct: 356 SRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDK 415
Query: 115 LTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDS 174
+TY L R + ET + + + + G E DR ++L+ G ++ A +
Sbjct: 416 ITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALRE 475
Query: 175 VQEKNL----VSWNSMLDGYAKCGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGE 226
+ + V++ M+D + K G+ K+ + M V +++ L++G K G+
Sbjct: 476 MLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQ 535
Query: 227 YREAMAVFEKMRAVGPKANEVTMVSVL 253
+ A + + M +G +++T ++L
Sbjct: 536 MKNADMLLDAMLNIGVVPDDITYNTLL 562
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 178/378 (47%), Gaps = 35/378 (9%)
Query: 56 SALSNSGDIDYSYRAFSQLSSPRI----FIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLA 111
+ L GDID + +++ + RI I+NTII ++ ++ +F +M G+
Sbjct: 231 NGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIR 290
Query: 112 PDYLTYPFLAKA---------SARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASC 162
P+ +TY L ++RLL+ ++ +++ N+LI +
Sbjct: 291 PNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTF---------NALIDAFFKE 341
Query: 163 GNIVWAHKVFDSVQEKNL----VSWNSMLDGYAKCGEMVLAHKVFESMSERD----VRSW 214
G +V A K+ + + ++++ +++N +++G+ + A ++F+ M +D ++++
Sbjct: 342 GKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTY 401
Query: 215 SSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVD 274
++LI+G+ K + + +F +M G N VT +++ G + +M+ K +V
Sbjct: 402 NTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS 461
Query: 275 NGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT--DVLIWNAMIGGLATHGSVEE 332
N +P ++ + L+ G ++ AL++F + K + ++ I+N MI G+ G V E
Sbjct: 462 NRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGE 521
Query: 333 SLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVD 392
+ LF ++ IK D VTY L++EA F + + G P+S Y ++
Sbjct: 522 AWDLF---CSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIR 578
Query: 393 VLARAGQLATAYQFICQM 410
R A + + I +M
Sbjct: 579 ANLRDCDRAASAELIKEM 596
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 178/389 (45%), Gaps = 32/389 (8%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASAR---------L 127
P F + T+I G +++++ +M++ G PD +TY + + L
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNL 245
Query: 128 LNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSW 183
LN+ + A+++ I N++I ++ A +F ++ K N+V++
Sbjct: 246 LNKMEAARIKANVV---------IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 184 NSMLDGYAKCGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKM-- 237
NS+++ G A ++ +M E+ +V ++++LID + K G+ EA + E+M
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 238 RAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAI 297
R++ P ++ + C H L++ K M K++V + +L++ + KC +
Sbjct: 357 RSIDPDTITYNLL-INGFCMH-NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414
Query: 298 EEALLVFHGVSKRKT--DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXX 355
E+ + +F +S+R + + + +I G G + + +FK M + + D +TY
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSIL 474
Query: 356 XXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPT 415
G + A F+ L K M + Y M++ + +AG++ A+ C + ++P
Sbjct: 475 LHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPD 534
Query: 416 ASMLGALLSGCINHRNFELAEIVGRKLIE 444
++SG + R + A+ + RK+ E
Sbjct: 535 VVTYNTMISGLCSKRLLQEADDLFRKMKE 563
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/377 (19%), Positives = 160/377 (42%), Gaps = 13/377 (3%)
Query: 79 IFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHA 138
++ ++ I + +L++ KM++ G PD +T L V++
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177
Query: 139 HIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAKCG 194
+++ G++ D F +LIH A + D + ++ +LV++ ++++G K G
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 195 EMVLAHKVFESMSERDVRS----WSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMV 250
++ LA + M +++ ++++ID K A+ +F +M G + N VT
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYN 297
Query: 251 SVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR 310
S++ + G + +++ + +V +L+D + K G + EA + + +R
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 311 KT--DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEA 368
D + +N +I G H ++E+ +FK M + + TY V++
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 369 WHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPME--PTASML-GALLSG 425
F + + G+ ++ Y ++ +AG +A QM PT M LL G
Sbjct: 418 VELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHG 477
Query: 426 CINHRNFELAEIVGRKL 442
++ + A ++ + L
Sbjct: 478 LCSYGKLDTALVIFKYL 494
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 159/341 (46%), Gaps = 10/341 (2%)
Query: 73 QLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQET 132
++ +P + ++I G + ++ KML + + Y L K +E
Sbjct: 441 KVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKED 500
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLV----SWNSMLD 188
G ++ +I D + N+ + G +F+ ++ + V S++ ++
Sbjct: 501 GHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIH 560
Query: 189 GYAKCGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKA 244
G K G +++F SM E+ D R+++ +IDG+ K G+ +A + E+M+ G +
Sbjct: 561 GLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP 620
Query: 245 NEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVF 304
VT SV+ A + L++ M+ + + L +V+ +SL+D + K G I+EA L+
Sbjct: 621 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLIL 680
Query: 305 HGVSKR--KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHG 362
+ ++ ++ WN+++ L + E+L F+ M+ + ++VTY
Sbjct: 681 EELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKV 740
Query: 363 GLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATA 403
+A+ F++ + K GM PS+ Y M+ LA+AG +A A
Sbjct: 741 RKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEA 781
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 157/366 (42%), Gaps = 14/366 (3%)
Query: 56 SALSNSGDIDYSYRAFSQL--SSPRI--FIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLA 111
L G +D +Y+ + ++ S R ++ ++I+ + N I+ M+ +
Sbjct: 455 DGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCS 514
Query: 112 PDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKV 171
PD + E G ++ I D + LIH G +++
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYEL 574
Query: 172 FDSVQEKNLV----SWNSMLDGYAKCGEMVLAHKVFESMS----ERDVRSWSSLIDGYVK 223
F S++E+ V ++N ++DG+ KCG++ A+++ E M E V ++ S+IDG K
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Query: 224 AGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVL 283
EA +FE+ ++ + N V S++ +G +++ ++ + ++ GL L
Sbjct: 635 IDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYT 694
Query: 284 QTSLVDMYAKCGAIEEALLVFHGVSKRKT--DVLIWNAMIGGLATHGSVEESLGLFKDMQ 341
SL+D K I EAL+ F + + K + + + +I GL ++ +++MQ
Sbjct: 695 WNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQ 754
Query: 342 AVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLA 401
G+K ++Y G + EA F+ G P S Y M++ L+ +
Sbjct: 755 KQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAM 814
Query: 402 TAYQFI 407
A+
Sbjct: 815 DAFSLF 820
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/462 (19%), Positives = 192/462 (41%), Gaps = 60/462 (12%)
Query: 40 SGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSS----PRIFIWNTIIRGYSNSKNP 95
+GL DE + ++ L + +D + F L P + +NT+I GY ++
Sbjct: 267 NGLKPDEVTYTSMI--GVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKF 324
Query: 96 IQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSL 155
++ S+ + G P + Y N +
Sbjct: 325 DEAYSLLERQRAKGSIPSVIAY-----------------------------------NCI 349
Query: 156 IHMYASCGNIVWAHKVFDSVQEK---NLVSWNSMLDGYAKCGEMVLAHKVFESMSER--- 209
+ G + A KVF+ +++ NL ++N ++D + G++ A ++ +SM +
Sbjct: 350 LTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLF 409
Query: 210 -DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMM 268
+VR+ + ++D K+ + EA A+FE+M +E+T S++ +G ++ +
Sbjct: 410 PNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKV 469
Query: 269 HKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT--DVLIWNAMIGGLAT 326
++ ++D+ ++ TSL+ + G E+ ++ + + D+ + N + +
Sbjct: 470 YEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFK 529
Query: 327 HGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEH 386
G E+ +F++++A D +Y G E + F S+ + G +
Sbjct: 530 AGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRA 589
Query: 387 YACMVDVLARAGQLATAYQFICQMP---MEPTASMLGALLSGCIN----HRNFELAEIVG 439
Y ++D + G++ AYQ + +M EPT G+++ G + L E
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 649
Query: 440 RKLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGV 481
K IEL + Y L + + V R D+A + E + ++G+
Sbjct: 650 SKRIEL---NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 120/277 (43%), Gaps = 15/277 (5%)
Query: 79 IFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHA 138
I I I G++N ++ +F M G D Y + + +
Sbjct: 557 ILIHGLIKAGFAN-----ETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLE 611
Query: 139 HIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAKCG 194
+ G E S+I A + A+ +F+ + K N+V ++S++DG+ K G
Sbjct: 612 EMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVG 671
Query: 195 EMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMV 250
+ A+ + E + ++ ++ +W+SL+D VKA E EA+ F+ M+ + N+VT
Sbjct: 672 RIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYG 731
Query: 251 SVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR 310
++ + K + + + G+ + + T+++ AK G I EA +F
Sbjct: 732 ILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKAN 791
Query: 311 K--TDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGI 345
D +NAMI GL+ ++ LF++ + G+
Sbjct: 792 GGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 6/232 (2%)
Query: 182 SWNSMLDGYAKCGEMVLAHKVFESMS----ERDVRSWSSLIDGYVKAGEYREAMAVFEKM 237
S+NS+L A+C ++ MS V + ++ G VKA + RE V + M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 238 RAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAI 297
R + +++ A + + + + + + + G T+ L T+L+ +AK G +
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 298 EEALLVFHGV--SKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXX 355
+ AL + + S D++++N I G V+ + F +++A G+K DEVTY
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 356 XXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFI 407
+ EA FE L+K P + Y M+ AG+ AY +
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLL 331
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 151/370 (40%), Gaps = 50/370 (13%)
Query: 56 SALSNSGDIDYSYRAFSQLSS----PRIFIWNTIIRGYSNSKNPIQSL-SIFLKMLRHGL 110
SA +NSG + F ++ P + +N I+ + P + S+ KM G+
Sbjct: 216 SAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGI 275
Query: 111 APDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHK 170
APD TY L R + V + G YD+ N+L+ +Y A K
Sbjct: 276 APDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMK 335
Query: 171 VFDSVQ----EKNLVSWNSMLDGYAKCG----EMVLAHKVFESMSERDVRSWSSLIDGYV 222
V + + ++V++NS++ YA+ G M L +++ E ++ DV ++++L+ G+
Sbjct: 336 VLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFE 395
Query: 223 KAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLV 282
+AG+ AM++FE+MR G K N T
Sbjct: 396 RAGKVESAMSIFEEMRNAGCKPNICTF--------------------------------- 422
Query: 283 LQTSLVDMYAKCGAIEEALLVFH--GVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDM 340
+ + MY G E + +F V D++ WN ++ +G E G+FK+M
Sbjct: 423 --NAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 480
Query: 341 QAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQL 400
+ G + T+ G ++A + + G+TP Y ++ LAR G
Sbjct: 481 KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMW 540
Query: 401 ATAYQFICQM 410
+ + + +M
Sbjct: 541 EQSEKVLAEM 550
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 154/365 (42%), Gaps = 20/365 (5%)
Query: 60 NSGDIDYSYRAFSQLS----SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYL 115
N G + F +++ SP I WNT++ + + + +F +M R G P+
Sbjct: 431 NRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE 490
Query: 116 TYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSV 175
T+ L A +R + E ++V+ ++ G D N+++ A G + KV +
Sbjct: 491 TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
Query: 176 QE----KNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYV----KAGEY 227
++ N +++ S+L YA E+ L H + E + + + L+ V K
Sbjct: 551 EDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLL 610
Query: 228 REAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSL 287
EA F +++ G + T+ S++ + K + Y+ + G ++ SL
Sbjct: 611 PEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSL 670
Query: 288 VDMYAKC---GAIEEAL--LVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQA 342
+ M+++ G EE L ++ G+ K D++ +N +I + + ++ +F +M+
Sbjct: 671 MYMHSRSADFGKSEEILREILAKGI---KPDIISYNTVIYAYCRNTRMRDASRIFSEMRN 727
Query: 343 VGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLAT 402
GI D +TY + +EA + K G P+ Y +VD + +
Sbjct: 728 SGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDE 787
Query: 403 AYQFI 407
A F+
Sbjct: 788 AKLFV 792
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 15/243 (6%)
Query: 16 TLLSLLDGCKSMLELKQLHAIL--ITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQ 73
T SLL + E+ +H++ + SG+ + + K L S + + RAFS+
Sbjct: 561 TYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVL-VCSKCDLLPEAERAFSE 619
Query: 74 LS----SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLN 129
L SP I N+++ Y + ++ + M G P TY L +R +
Sbjct: 620 LKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSAD 679
Query: 130 QETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNS 185
+ I+ G + D N++I+ Y + A ++F ++ +++++N+
Sbjct: 680 FGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNT 739
Query: 186 MLDGYAKCGEMVLAHKVFESMSERDVR----SWSSLIDGYVKAGEYREAMAVFEKMRAVG 241
+ YA A V M + R +++S++DGY K EA E +R +
Sbjct: 740 FIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLD 799
Query: 242 PKA 244
P A
Sbjct: 800 PHA 802
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 164/363 (45%), Gaps = 17/363 (4%)
Query: 82 WNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHII 141
W +S N + + +F KM++ P + + + A+ N + +S+ H+
Sbjct: 37 WGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHME 96
Query: 142 KTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQ----EKNLVSWNSMLDGYAKCGEMV 197
G +D + N +I+ C V A V + E ++V+ +S+++G+ + +
Sbjct: 97 VCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVF 156
Query: 198 LAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVT---MV 250
A + M E DV ++++IDG K G +A+ +F++M G +A+ VT +V
Sbjct: 157 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216
Query: 251 SVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR 310
+ LC + ++M ++ + +P ++ T+++D++ K G EA+ ++ +++R
Sbjct: 217 AGLCCSGRWS--DAARLMRDMVMRDIVP-NVITFTAVIDVFVKEGKFSEAMKLYEEMTRR 273
Query: 311 --KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEA 368
DV +N++I GL HG V+E+ + M G D VTY V E
Sbjct: 274 CVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEG 333
Query: 369 WHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSG-CI 427
F + + G+ + Y ++ +AG+ A + +M P LL G C+
Sbjct: 334 TKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCM 393
Query: 428 NHR 430
N R
Sbjct: 394 NWR 396
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 146/331 (44%), Gaps = 9/331 (2%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P + +++I G+ ++ + KM G PD + Y + S ++ V +
Sbjct: 137 PDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVEL 196
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAK 192
+ + G D NSL+ G A ++ + + N++++ +++D + K
Sbjct: 197 FDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVK 256
Query: 193 CGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVT 248
G+ A K++E M+ R DV +++SLI+G G EA + + M G + VT
Sbjct: 257 EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVT 316
Query: 249 MVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVS 308
+++ +++G + + + GL + +++ Y + G + A +F +
Sbjct: 317 YNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMD 376
Query: 309 KRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEA 368
R ++ ++ ++ GL + VE++L LF++MQ I+ D TY G V++A
Sbjct: 377 SRP-NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDA 435
Query: 369 WHFFESLDKCGMTPSSEHYACMVDVLARAGQ 399
W F SL G+ P Y M+ R Q
Sbjct: 436 WDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 466
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 161/381 (42%), Gaps = 47/381 (12%)
Query: 79 IFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHA 138
++ +N +I + +LSI KML+ G PD +T L R VS+
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 139 HIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAKCG 194
+++ G++ D N++I + A F ++ K N+V++ ++++G
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239
Query: 195 EMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMV 250
A ++ M ++ +V ++S+L+D +VK G+ EA +FE+M + + VT
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299
Query: 251 SVLCA-CAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSK 309
S++ C H +++ M +V G +V +L++ + K +E+ + +F +S+
Sbjct: 300 SLINGLCLH-DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 310 R-------------------------------------KTDVLIWNAMIGGLATHGSVEE 332
R D+ +N ++GGL +G +E+
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418
Query: 333 SLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVD 392
+L +F+DMQ + D VTY G V+EAW F SL G+ P Y M+
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 478
Query: 393 VLARAGQLATAYQFICQMPME 413
L G L +M E
Sbjct: 479 GLCTKGLLHEVEALYTKMKQE 499
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 149/323 (46%), Gaps = 28/323 (8%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKA---------SARL 127
P I +N II +K + F ++ R G+ P+ +TY L +ARL
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 128 LNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQ----EKNLVSW 183
L+ + ++I D F++N G ++ A ++F+ + + ++V++
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKN---------GKVLEAKELFEEMVRMSIDPDIVTY 298
Query: 184 NSMLDGYAKCGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRA 239
+S+++G + A+++F+ M + DV S+++LI+G+ KA + M +F +M
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 240 VGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEE 299
G +N VT +++ G ++K + + G+ + L+ G +E+
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418
Query: 300 ALLVFHGVSKRKTD--VLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXX 357
AL++F + KR+ D ++ + +I G+ G VEE+ LF + G+K D VTY
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 478
Query: 358 XXXHGGLVKEAWHFFESLDKCGM 380
GL+ E + + + G+
Sbjct: 479 GLCTKGLLHEVEALYTKMKQEGL 501
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 140/314 (44%), Gaps = 45/314 (14%)
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVS 135
+P + ++ ++ + + +++ +F +M+R + PD +TY + L+N G+
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY-------SSLIN---GLC 306
Query: 136 VHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGE 195
+H I + +D + + ++VS+N++++G+ K
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLA---------------------DVVSYNTLINGFCKAKR 345
Query: 196 MVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVS 251
+ K+F MS+R + ++++LI G+ +AG+ +A F +M G + T
Sbjct: 346 VEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNI 405
Query: 252 VLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR- 310
+L G LEK ++ + + + L +V T+++ K G +EEA +F +S +
Sbjct: 406 LLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKG 465
Query: 311 -KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAW 369
K D++ + M+ GL T G + E L+ M+ G+ ++ T G + +
Sbjct: 466 LKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL--------SDGDITLSA 517
Query: 370 HFFESLDKCGMTPS 383
+ + CG PS
Sbjct: 518 ELIKKMLSCGYAPS 531
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 177/396 (44%), Gaps = 47/396 (11%)
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVS 135
SP +F++N +I + ++ +F +M + GL P+ +TY L R +T +S
Sbjct: 364 SPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALS 423
Query: 136 VHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAH----KVFDSVQEKNLVSWNSMLDGYA 191
++ TG + + NSLI+ + G+I A ++ + E +V++ S++ GY
Sbjct: 424 FLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC 483
Query: 192 KCGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEV 247
G++ A +++ M+ + + ++++L+ G +AG R+A+ +F +M K N V
Sbjct: 484 SKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRV 543
Query: 248 TMVSVLCACAHLGALEKG-----KMMHKYIVDN---------GLPLT------------- 280
T ++ G + K +M K IV + GL LT
Sbjct: 544 TYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGL 603
Query: 281 --------LVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT--DVLIWNAMIGGLATHGSV 330
+ T L+ + + G +EEAL V + +R D++ + +I G H
Sbjct: 604 HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDR 663
Query: 331 EESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACM 390
+ GL K+M G+K D+V Y G KEA+ ++ + G P+ Y +
Sbjct: 664 KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAV 723
Query: 391 VDVLARAGQLATAYQFICQMPMEPTASMLGALLSGC 426
++ L +AG + A + +C M+P +S+ + GC
Sbjct: 724 INGLCKAGFVNEA-EVLCS-KMQPVSSVPNQVTYGC 757
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 151/370 (40%), Gaps = 47/370 (12%)
Query: 79 IFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLA---------KASARLLN 129
++ +N++I G+ + + +M+ L P +TY L + RL +
Sbjct: 437 VYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH 496
Query: 130 QETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNL----VSWNS 185
+ TG + I + +L+ G I A K+F+ + E N+ V++N
Sbjct: 497 EMTGKGIAPSI---------YTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547
Query: 186 MLDGYAKCGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVG 241
M++GY + G+M A + + M+E+ D S+ LI G G+ EA + +
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607
Query: 242 PKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEAL 301
+ NE+ +L G LE+ + + +V G+ L LV L+D K +
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK----HKDR 663
Query: 302 LVFHGVSKR------KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXX 355
+F G+ K K D +I+ +MI + G +E+ G++ M G +EVTY
Sbjct: 664 KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAV 723
Query: 356 XXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPT 415
G V EA + P+ Y C +D+L + ++ M+
Sbjct: 724 INGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKG-----------EVDMQKA 772
Query: 416 ASMLGALLSG 425
+ A+L G
Sbjct: 773 VELHNAILKG 782
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 154/377 (40%), Gaps = 28/377 (7%)
Query: 55 FSALSNSGDIDYSYRAFSQLS----SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGL 110
S L +G I + + F++++ P +N +I GY + ++ +M G+
Sbjct: 514 LSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Query: 111 APDYLTYPFLAKASARLLNQETGVSVHAHIIKTGH-EYDRFIQNSLIHMYASCGNIVWAH 169
PD +Y L L Q + V + G+ E + L+H + G + A
Sbjct: 574 VPDTYSYRPLIHGLC-LTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEAL 632
Query: 170 KVFDSVQEK----NLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRS----WSSLIDGY 221
V + ++ +LV + ++DG K + L + + M +R ++ ++S+ID
Sbjct: 633 SVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAK 692
Query: 222 VKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKG-----KMMHKYIVDNG 276
K G+++EA +++ M G NEVT +V+ G + + KM V N
Sbjct: 693 SKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQ 752
Query: 277 LPLTL---VLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEES 333
+ +L VDM A+E + G+ + +N +I G G +EE+
Sbjct: 753 VTYGCFLDILTKGEVDMQK---AVELHNAILKGLL---ANTATYNMLIRGFCRQGRIEEA 806
Query: 334 LGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDV 393
L M G+ D +TY VK+A + S+ + G+ P Y ++
Sbjct: 807 SELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHG 866
Query: 394 LARAGQLATAYQFICQM 410
AG++ A + +M
Sbjct: 867 CCVAGEMGKATELRNEM 883
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/385 (19%), Positives = 159/385 (41%), Gaps = 57/385 (14%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P + + ++ G ++ ++ +F M+ G+ PD Y + ++ L + +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----------NLVSWNSM 186
AH+ TG + + N LI + KV+++V K ++V++ ++
Sbjct: 250 IAHMEATGCDVNIVPYNVLID------GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTL 303
Query: 187 LDGYAKCGEMVLAHKVFESM-------SERDVRS-------------------------- 213
+ G K E + ++ + M SE V S
Sbjct: 304 VYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGV 363
Query: 214 ------WSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKM 267
+++LID K ++ EA +F++M +G + N+VT ++ G L+
Sbjct: 364 SPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALS 423
Query: 268 MHKYIVDNGLPLTLVLQTSLVDMYAKCGAIE--EALLVFHGVSKRKTDVLIWNAMIGGLA 325
+VD GL L++ SL++ + K G I E + K + V+ + +++GG
Sbjct: 424 FLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC 483
Query: 326 THGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSE 385
+ G + ++L L+ +M GI T+ GL+++A F + + + P+
Sbjct: 484 SKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRV 543
Query: 386 HYACMVDVLARAGQLATAYQFICQM 410
Y M++ G ++ A++F+ +M
Sbjct: 544 TYNVMIEGYCEEGDMSKAFEFLKEM 568
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 177/393 (45%), Gaps = 18/393 (4%)
Query: 55 FSALSNSGDIDYSYRAFSQLSS----PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGL 110
S L G D + S++ S P + +N ++ G+ KN + +F +L GL
Sbjct: 450 LSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGL 509
Query: 111 APDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHK 170
P+ TY L R +++ + V H+ + E + + ++I+ G A +
Sbjct: 510 KPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARE 569
Query: 171 VF-DSVQEKNL----VSWNSMLDGYAKCGEMVLAHKVFESMS----ERDVRSWSSLIDGY 221
+ + ++EK L +S+NS++DG+ K GEM A +E M +V +++SL++G
Sbjct: 570 LLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGL 629
Query: 222 VKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTL 281
K +A+ + ++M+ G K + +++ +E + +++ GL +
Sbjct: 630 CKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQ 689
Query: 282 VLQTSLVDMYAKCGAIEEALLVFHGVSKR--KTDVLIWNAMIGGLATHGSVEESLGLFKD 339
+ SL+ + G + AL ++ + K + D+ + +I GL G++ + L+ +
Sbjct: 690 PIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTE 749
Query: 340 MQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQ 399
MQAVG+ DE+ Y G + FE + K +TP+ Y ++ R G
Sbjct: 750 MQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGN 809
Query: 400 LATAYQFICQM---PMEPTASMLGALLSGCINH 429
L A++ +M + P + L+SG + +
Sbjct: 810 LDEAFRLHDEMLDKGILPDGATFDILVSGQVGN 842
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/411 (20%), Positives = 171/411 (41%), Gaps = 54/411 (13%)
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIF--------------------------------- 102
+P +F +TII+G+ + ++L +F
Sbjct: 406 TPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATEL 465
Query: 103 -LKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYAS 161
KM G+ P+ ++Y + R N + V ++I++ G + + + + LI
Sbjct: 466 LSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFR 525
Query: 162 CGNIVWAHKVFDSVQEKNL----VSWNSMLDGYAKCGEMVLAHKVFESMSER-----DVR 212
+ A +V + + N+ V + ++++G K G+ A ++ +M E
Sbjct: 526 NHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCM 585
Query: 213 SWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYI 272
S++S+IDG+ K GE A+A +E+M G N +T S++ +++ M +
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 273 VDNGLPLTLVLQTSLVDMYAKCGAIEEALLVF-----HGVSKRKTDVLIWNAMIGGLATH 327
+ G+ L + +L+D + K +E A +F G++ + I+N++I G
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQP---IYNSLISGFRNL 702
Query: 328 GSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHY 387
G++ +L L+K M G++ D TY G + A + + G+ P Y
Sbjct: 703 GNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIY 762
Query: 388 ACMVDVLARAGQLATAYQFICQMP---MEPTASMLGALLSGCINHRNFELA 435
+V+ L++ GQ + +M + P + A+++G N + A
Sbjct: 763 TVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEA 813
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 138/320 (43%), Gaps = 10/320 (3%)
Query: 101 IFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYA 160
++ +M+ G+ D +T L +AS R + V + I+ G E D + + +
Sbjct: 220 LYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACC 279
Query: 161 SCGNIVWAHKVFDSVQEKNLV-----SWNSMLDGYAKCGEMVLAHKVFESMSER----DV 211
++ A+ + ++EK L ++ S++ K G M A ++ + M +V
Sbjct: 280 KTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNV 339
Query: 212 RSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKY 271
+ +SLI G+ K + A+ +F+KM GP N VT ++ G +EK +K
Sbjct: 340 VAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKK 399
Query: 272 IVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVF-HGVSKRKTDVLIWNAMIGGLATHGSV 330
+ GL ++ +++ + K EEAL +F +V + N ++ L G
Sbjct: 400 MEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKT 459
Query: 331 EESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACM 390
+E+ L M++ GI + V+Y + A F ++ + G+ P++ Y+ +
Sbjct: 460 DEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSIL 519
Query: 391 VDVLARAGQLATAYQFICQM 410
+D R A + + M
Sbjct: 520 IDGCFRNHDEQNALEVVNHM 539
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 157/335 (46%), Gaps = 13/335 (3%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P + ++ TII + + +LS+F +M +G+ PD + Y L S+
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQE----KNLVSWNSMLDGYAK 192
+ K + D N+LI + G + A ++++ + N+ ++ S+++G+
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM 294
Query: 193 CGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVT 248
G + A ++F M + DV +++SLI+G+ K + +AM +F +M G N +T
Sbjct: 295 EGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTIT 354
Query: 249 MVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVS 308
+++ +G + + ++V G+P + L+ G +++AL++F +
Sbjct: 355 YTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQ 414
Query: 309 KRKTD-----VLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGG 363
KR+ D + +N ++ GL +G +E++L +F+DM+ + +TY G
Sbjct: 415 KREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAG 474
Query: 364 LVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAG 398
VK A + F SL G+ P+ Y M+ L R G
Sbjct: 475 KVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREG 509
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 157/338 (46%), Gaps = 13/338 (3%)
Query: 79 IFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHA 138
++ N ++ + S P + S KM++ G PD +T+ L E +S+
Sbjct: 107 LYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVN 166
Query: 139 HIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQ----EKNLVSWNSMLDGYAKCG 194
+++ G + D + ++I G++ +A +FD ++ ++V + S+++G G
Sbjct: 167 QMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSG 226
Query: 195 EMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMV 250
A + M++R DV ++++LID +VK G++ +A ++ +M + N T
Sbjct: 227 RWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYT 286
Query: 251 SVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR 310
S++ G +++ + M + G +V TSL++ + KC +++A+ +F+ +S++
Sbjct: 287 SLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK 346
Query: 311 --KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEA 368
+ + + +I G G + +F M + G+ + TY + G VK+A
Sbjct: 347 GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKA 406
Query: 369 WHFFESLDKC---GMTPSSEHYACMVDVLARAGQLATA 403
FE + K G+ P+ Y ++ L G+L A
Sbjct: 407 LMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 185/392 (47%), Gaps = 34/392 (8%)
Query: 16 TLLSLLDG-C--KSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFS 72
T SL++G C M E + ++ G+ D + ++ +L +G ++Y+ F
Sbjct: 144 TFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTII--DSLCKNGHVNYALSLFD 201
Query: 73 QLSS----PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKA---SA 125
Q+ + P + ++ +++ G NS + S+ M + + PD +T+ L A
Sbjct: 202 QMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEG 261
Query: 126 RLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLV 181
+ L+ E ++ +I+ + F SLI+ + G + A ++F ++ K ++V
Sbjct: 262 KFLDAE---ELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 182 SWNSMLDGYAKCGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKM 237
++ S+++G+ KC ++ A K+F MS++ + ++++LI G+ + G+ A VF M
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 238 RAVGPKANEVTMVSVLCACAHLGALEKGKM----MHKYIVDNGLPLTLVLQTSLVDMYAK 293
+ G N T +L + G ++K M M K +D P + T V ++
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAP---NIWTYNVLLHGL 435
Query: 294 C--GAIEEALLVFHGVSKRKTDVLIWNAMIG--GLATHGSVEESLGLFKDMQAVGIKADE 349
C G +E+AL+VF + KR+ D+ I I G+ G V+ ++ LF + + G+K +
Sbjct: 436 CYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNV 495
Query: 350 VTYXXXXXXXXHGGLVKEAWHFFESLDKCGMT 381
VTY GL EA F + + G++
Sbjct: 496 VTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 153/385 (39%), Gaps = 54/385 (14%)
Query: 32 QLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSN 91
QLH + G S K L FS L D+ + RAF + I+R +
Sbjct: 7 QLHRNRLVKGNS------GKALSFSRLL---DLSFWVRAFCN--------YREILRNGLH 49
Query: 92 SKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFI 151
S ++L +F M+ P + + L A++ + +++ H+ G +D +
Sbjct: 50 SLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYT 109
Query: 152 QNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDV 211
N L++ + A +S L K G E D+
Sbjct: 110 CNLLMNCFCQSSQPYLA---------------SSFLGKMMKLG------------FEPDI 142
Query: 212 RSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEV---TMVSVLCACAHLG-ALEKGKM 267
+++SLI+G+ EAM++ +M +G K + V T++ LC H+ AL
Sbjct: 143 VTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQ 202
Query: 268 MHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT--DVLIWNAMIGGLA 325
M Y G+ +V+ TSLV+ G +A + G++KRK DV+ +NA+I
Sbjct: 203 MENY----GIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 326 THGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSE 385
G ++ L+ +M + I + TY G V EA F ++ G P
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 386 HYACMVDVLARAGQLATAYQFICQM 410
Y +++ + ++ A + +M
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEM 343
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 4/172 (2%)
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFF 372
D++ + ++I G +EE++ + M +GIK D V Y G V A F
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF 200
Query: 373 ESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMP---MEPTASMLGALLSGCINH 429
+ ++ G+ P Y +V+ L +G+ A + M ++P AL+ +
Sbjct: 201 DQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKE 260
Query: 430 RNFELAEIVGRKLIELE-PDHDGRYIGLSNVYAGVKRWDDARGMREAMERRG 480
F AE + ++I + + Y L N + D+AR M ME +G
Sbjct: 261 GKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG 312
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 149/330 (45%), Gaps = 28/330 (8%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKA---------SARL 127
P + I+NT+I G +++ +L +F M + G+ D +TY L +ARL
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 128 LNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSW 183
L + ++I +LI + GN++ A ++ + + N+ ++
Sbjct: 242 LRDMVKRKIDPNVI---------FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY 292
Query: 184 NSMLDGYAKCGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRA 239
NS+++G+ G + A +F+ M + DV ++++LI G+ K+ + M +F +M
Sbjct: 293 NSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY 352
Query: 240 VGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEE 299
G + T +++ G L + + +VD G+ +V L+D G IE+
Sbjct: 353 QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEK 412
Query: 300 ALLVFHGVSKRKTDV--LIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXX 357
AL++ + K + DV + +N +I GL ++E+ LF+ + G+K D + Y
Sbjct: 413 ALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMIS 472
Query: 358 XXXHGGLVKEAWHFFESLDKCGMTPSSEHY 387
GL +EA + + G PS Y
Sbjct: 473 GLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 151/335 (45%), Gaps = 16/335 (4%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P I +++ G+ +++S+ M G P+ + Y + + + + V
Sbjct: 147 PSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEV 206
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVF-DSVQEK---NLVSWNSMLDGYAK 192
+ K G D N+LI ++ G A ++ D V+ K N++ + +++D + K
Sbjct: 207 FYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 266
Query: 193 CGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVT 248
G ++ A +++ M R +V +++SLI+G+ G +A +F+ M + G + VT
Sbjct: 267 EGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVT 326
Query: 249 MVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFH--- 305
+++ +E G + + GL +L+ Y + G + A VF+
Sbjct: 327 YNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV 386
Query: 306 --GVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGG 363
GVS D++ +N ++ L +G +E++L + +D+Q + D +TY
Sbjct: 387 DCGVSP---DIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTD 443
Query: 364 LVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAG 398
+KEAW F SL + G+ P + Y M+ L R G
Sbjct: 444 KLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/418 (20%), Positives = 180/418 (43%), Gaps = 18/418 (4%)
Query: 97 QSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLI 156
+ S+F +ML+ P + + + A++ + + ++ + G +D + LI
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 157 HMYASCGNIVWAHKVFDSVQE----KNLVSWNSMLDGYAKCGEMVLAHKVFESMSE---- 208
H + C + A + + + ++V+ S+L+G+ + A + +SM
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 209 RDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMM 268
+V ++++I+G K + A+ VF M G +A+ VT +++ ++ G +
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 269 HKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT--DVLIWNAMIGGLAT 326
+ +V + ++ T+L+D + K G + EA ++ + +R +V +N++I G
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 327 HGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEH 386
HG + ++ +F M + G D VTY V++ F + G+ +
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361
Query: 387 YACMVDVLARAGQLATAYQFICQMP---MEPTASMLGALLSGCINHRNFELAEIVGRKLI 443
Y ++ +AG+L A + +M + P LL N+ E A ++ L
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 421
Query: 444 ELEPDHDGRYIGLSNVYAGVKRWD---DARGMREAMERRGVKKSPGFSSVEICGVSRR 498
+ E D D I + + G+ R D +A + ++ R+GVK I G+ R+
Sbjct: 422 KSEMDVD--IITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRK 477
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 175/391 (44%), Gaps = 23/391 (5%)
Query: 41 GLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQL----SSPRIFIWNTIIRGYSNSKNPI 96
GL DE + V+ GD+D + R Q+ S N I+ G+
Sbjct: 219 GLVPDEKTFTTVM--QGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVE 276
Query: 97 QSLSIFLKMLRH-GLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSL 155
+L+ +M G PD T+ L + + + + + +++ G++ D + NS+
Sbjct: 277 DALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSV 336
Query: 156 IHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAKCGEMVLAHKVFESMSER-- 209
I G + A +V D + + N V++N+++ K ++ A ++ ++ +
Sbjct: 337 ISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
Query: 210 --DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKM 267
DV +++SLI G +R AM +FE+MR+ G + +E T ++ + G L++
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 268 MHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVF-----HGVSKRKTDVLIWNAMIG 322
M K + +G +++ +L+D + K EA +F HGVS+ + + +N +I
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSR---NSVTYNTLID 513
Query: 323 GLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTP 382
GL VE++ L M G K D+ TY GG +K+A +++ G P
Sbjct: 514 GLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEP 573
Query: 383 SSEHYACMVDVLARAGQLATAYQFICQMPME 413
Y ++ L +AG++ A + + + M+
Sbjct: 574 DIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/348 (19%), Positives = 152/348 (43%), Gaps = 11/348 (3%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P + +N +I+ + ++ + M +GL PD T+ + + + + + +
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKN-----LVSWNSMLDGYA 191
+++ G + N ++H + G + A + ++ ++N++++G
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 192 KCGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEV 247
K G + A ++ + M + DV +++S+I G K GE +EA+ V ++M N V
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV 366
Query: 248 TMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGV 307
T +++ +E+ + + + G+ + SL+ A+ +F +
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Query: 308 SKR--KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLV 365
+ + D +N +I L + G ++E+L + K M+ G +TY
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
Query: 366 KEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPME 413
+EA F+ ++ G++ +S Y ++D L ++ ++ A Q + QM ME
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 178/373 (47%), Gaps = 15/373 (4%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P I +NT++ + +K ++ S+F G+AP+ TY L K S + E
Sbjct: 112 PAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGF 171
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAK 192
+ K G + D F +++I+ A G + A ++FD + E+ ++ +N ++DG+ K
Sbjct: 172 LDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLK 231
Query: 193 CGEMVLAHKVFESMSER-----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEV 247
+ A ++++ + E +V++ + +I G K G + + ++E+M+ + +
Sbjct: 232 EKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLY 291
Query: 248 TMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGV 307
T S++ G ++K + + + + + +V +++ + +CG I+E+L ++ +
Sbjct: 292 TYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM 351
Query: 308 S-KRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVK 366
K +++ +N +I GL +G ++E+ +++ M A G AD+ TY G V
Sbjct: 352 EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVN 411
Query: 367 EAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMP---MEPTASMLGALL 423
+A + ++ G YA ++D L + +L A + +M +E + + AL+
Sbjct: 412 KALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALI 471
Query: 424 SGCINHRNFELAE 436
G I R+ L E
Sbjct: 472 GGLI--RDSRLGE 482
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 183/402 (45%), Gaps = 23/402 (5%)
Query: 46 EPFISKVLCFSA----LSNSGDIDYSYRAFSQLS----SPRIFIWNTIIRGYSNSKNPIQ 97
E F V +S L+ +G +D + F ++S +P + +N +I G+ K+
Sbjct: 178 EGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKT 237
Query: 98 SLSIFLKMLRHG-LAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLI 156
++ ++ ++L + P+ T+ + ++ + + + + + E D + +SLI
Sbjct: 238 AMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLI 297
Query: 157 HMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAKCG---EMVLAHKVFESMSER 209
H GN+ A VF+ + E+ ++V++N+ML G+ +CG E + ++ E +
Sbjct: 298 HGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV 357
Query: 210 DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMH 269
++ S++ LI G ++ G+ EA ++ M A G A++ T + G + K +
Sbjct: 358 NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVM 417
Query: 270 KYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDV--LIWNAMIGGLATH 327
+ + +G L + S++D K +EEA + +SK ++ + NA+IGGL
Sbjct: 418 QEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD 477
Query: 328 GSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHY 387
+ E+ ++M G + V+Y G EA F + + + G P + Y
Sbjct: 478 SRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTY 537
Query: 388 ACMVDVLARAGQLATA----YQFICQMPMEPTASMLGALLSG 425
+ ++ L R ++ A +QF+ Q +E M L+ G
Sbjct: 538 SILLCGLCRDRKIDLALELWHQFL-QSGLETDVMMHNILIHG 578
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 80/173 (46%), Gaps = 8/173 (4%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P + +N +I G + ++ + +ML +G PD TY L R + + +
Sbjct: 497 PTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALEL 556
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAK 192
+++G E D + N LIH S G + A V +++ + NLV++N++++G+ K
Sbjct: 557 WHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFK 616
Query: 193 CGEMVLAHKVFESMS----ERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVG 241
G+ A ++ M + D+ S+++++ G AM F+ R G
Sbjct: 617 VGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHG 669
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/390 (18%), Positives = 153/390 (39%), Gaps = 54/390 (13%)
Query: 57 ALSNSGDIDYSYRAFSQL----SSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAP 112
L ++G++D + F++L +S + +NT++ G+ +SL ++ +++ H +
Sbjct: 299 GLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW-RIMEHKNSV 357
Query: 113 DYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVF 172
+ ++Y L K + + + G+ D+ IH G + A V
Sbjct: 358 NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVM 417
Query: 173 DSVQEK----NLVSWNSMLDGYAKCGEMVLAHKVFESMSE------------------RD 210
V+ ++ ++ S++D K + A + + MS+ RD
Sbjct: 418 QEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD 477
Query: 211 VR---------------------SWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTM 249
R S++ LI G KAG++ EA A ++M G K + T
Sbjct: 478 SRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTY 537
Query: 250 VSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSK 309
+LC ++ + + +GL +++ L+ G +++A+ V +
Sbjct: 538 SILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEH 597
Query: 310 RK--TDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKE 367
R +++ +N ++ G G + ++ M +G++ D ++Y V
Sbjct: 598 RNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSY 657
Query: 368 AWHFFESLDKCGMTPSSEHYACMVDVLARA 397
A FF+ G+ P+ + ++L RA
Sbjct: 658 AMEFFDDARNHGIFPTVYTW----NILVRA 683
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 167/375 (44%), Gaps = 13/375 (3%)
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVS 135
+P + + +I Y+ ++L + M G+ + TY + +L + +
Sbjct: 481 TPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFA 540
Query: 136 VHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQE----KNLVSWNSMLDGYA 191
V ++K G + D + N++I + GN+ A + +Q+ ++ ++ GYA
Sbjct: 541 VFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYA 600
Query: 192 KCGEMVLAHKVFESMSE----RDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEV 247
K G+M + +VF+ M V +++ LI+G V+ + +A+ + ++M G ANE
Sbjct: 601 KSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEH 660
Query: 248 TMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGV 307
T ++ A +G K + + GL + + +L+ K G ++ AL V +
Sbjct: 661 TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM 720
Query: 308 SKRKT--DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLV 365
S R + ++N +I G A G V E+ L + M+ G+K D TY G +
Sbjct: 721 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDM 780
Query: 366 KEAWHFFESLDKCGMTPSSEHYACMVDVLARAG---QLATAYQFICQMPMEPTASMLGAL 422
A E ++ G+ P+ + Y ++ ARA + + Y+ + M ++P ++ L
Sbjct: 781 NRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCL 840
Query: 423 LSGCINHRNFELAEI 437
L+ ++ + A I
Sbjct: 841 LTSLLSRASIAEAYI 855
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 135/328 (41%), Gaps = 47/328 (14%)
Query: 37 LITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSS----PRIFIWNTIIRGYSNS 92
++ G+ D + ++ SA G++D + + ++ P + II GY+ S
Sbjct: 545 MVKEGMKPDVILYNNII--SAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 602
Query: 93 KNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQ 152
+ +SL +F M R G P T+ L E V + + G +
Sbjct: 603 GDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTY 662
Query: 153 NSLIHMYASCGNIVWAHKVFDSVQEKNL----VSWNSMLDGYAKCGEMVLAHKVFESMSE 208
++ YAS G+ A + F +Q + L ++ ++L K G M A V + MS
Sbjct: 663 TKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSA 722
Query: 209 RDVRS----WSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEK 264
R++ ++ LIDG+ + G+ EA + ++M+ G K + T S + AC+ G
Sbjct: 723 RNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAG---- 778
Query: 265 GKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGL 324
DM IEE + GV K ++ + +I G
Sbjct: 779 ------------------------DMNRATQTIEEMEAL--GV---KPNIKTYTTLIKGW 809
Query: 325 ATHGSVEESLGLFKDMQAVGIKADEVTY 352
A E++L +++M+A+GIK D+ Y
Sbjct: 810 ARASLPEKALSCYEEMKAMGIKPDKAVY 837
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 106/252 (42%), Gaps = 11/252 (4%)
Query: 165 IVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHK---------VFESMSERDVRSWS 215
+ W + + + N SW+ +G K + +L FE +S+ +
Sbjct: 254 VRWVEEGEEDTKMSNKSSWHQEREGSRKSLQRILDTNGDNWQAVISAFEKISKPSRTEFG 313
Query: 216 SLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDN 275
++ Y + G+ A FE+MRA G S++ A A +++ + + +
Sbjct: 314 LMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEE 373
Query: 276 GLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSK--RKTDVLIWNAMIGGLATHGSVEES 333
G+ ++LV + +V ++K G E A F + + + I+ +I ++E +
Sbjct: 374 GIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERA 433
Query: 334 LGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDV 393
L ++M+ GI A Y K+ F+ L +CG TP+ Y C++++
Sbjct: 434 EALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINL 493
Query: 394 LARAGQLATAYQ 405
+ G+++ A +
Sbjct: 494 YTKVGKISKALE 505
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 162/360 (45%), Gaps = 26/360 (7%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P ++ ++ N+ + +F +M R GL D TY + + + E
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAK 192
+ + G + +LIH Y + +A+++F+++ + N+V++++++DG+ K
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 193 CGEMVLAHKVFESM-------------------SER-DVRSWSSLIDGYVKAGEYREAMA 232
G++ A ++FE M SER +V ++ +L+DG+ K+ EA
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 660
Query: 233 VFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYA 292
+ + M G + N++ +++ +G L++ + + + ++G P TL +SL+D Y
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720
Query: 293 KCGAIEEALLVFHGVSKRKT--DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEV 350
K + A V + + +V+I+ MI GL G +E+ L + M+ G + + V
Sbjct: 721 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV 780
Query: 351 TYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQM 410
TY G ++ E + G+ P+ Y ++D + G L A+ + +M
Sbjct: 781 TYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/367 (19%), Positives = 149/367 (40%), Gaps = 34/367 (9%)
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLA------KASARLLN 129
SP+IF N+++ Y S + + + KM++ G P Y+ Y L K S
Sbjct: 371 SPKIF--NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDL 428
Query: 130 QETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLV----SWNS 185
+ ++ ++ G ++ +S S G A V + + + +++
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 488
Query: 186 MLDGYAKCGEMVLAHKVFESMSE----RDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVG 241
+L+ +M LA +FE M DV +++ ++D + KAG +A F +MR VG
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548
Query: 242 PKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEAL 301
N VT +++ A + + + ++ G +V ++L+D + K G +E+A
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608
Query: 302 LVFHGV------------------SKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAV 343
+F + + + +V+ + A++ G VEE+ L M
Sbjct: 609 QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 668
Query: 344 GIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATA 403
G + +++ Y G + EA + + G + Y+ ++D + + A
Sbjct: 669 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 728
Query: 404 YQFICQM 410
+ + +M
Sbjct: 729 SKVLSKM 735
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 109/265 (41%), Gaps = 21/265 (7%)
Query: 179 NLVSWNSMLDGYAKCGEMVLAHKVFESMSERDV----RSWSSLIDGYVKAGEYREAMAVF 234
N+V+++++L G ++ +V M + ++SL+ Y +G++ A +
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395
Query: 235 EKMRAVGPKANEVT---MVSVLCA------CAHLGALEKGKMMHKYIVDNGLPLTLVLQT 285
+KM G V ++ +C C L EK + ++ G+ L + +
Sbjct: 396 KKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKA---YSEMLAAGVVLNKINVS 452
Query: 286 SLVDMYAKCGAIEEALLVFHGVSKRK--TDVLIWNAMIGGLATHGSVEESLGLFKDMQAV 343
S G E+A V + + D ++ ++ L +E + LF++M+
Sbjct: 453 SFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRG 512
Query: 344 GIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATA 403
G+ AD TY GL+++A +F + + G TP+ Y ++ +A +++ A
Sbjct: 513 GLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYA 572
Query: 404 YQFICQMPME---PTASMLGALLSG 425
+ M E P AL+ G
Sbjct: 573 NELFETMLSEGCLPNIVTYSALIDG 597
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 161/355 (45%), Gaps = 20/355 (5%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P + +N+I+ G S + +L + KM + D TY + + R + +S+
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVW---AHKVFDSVQEK---NLVSWNSMLDGY 190
+ G + NSL+ G W A + D V + N++++N +LD +
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGK--WNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 191 AKCGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANE 246
K G++ A+++++ M R ++ ++++L+DGY EA + + M +
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368
Query: 247 VTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVF-- 304
VT S++ + ++ G + + I GL V + LV + + G I+ A +F
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428
Query: 305 ---HGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXH 361
HGV DV+ + ++ GL +G +E++L +F+D+Q + V Y
Sbjct: 429 MVSHGVLP---DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 362 GGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTA 416
GG V++AW+ F SL G+ P+ Y M+ L + G L+ A + +M + A
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA 540
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 153/342 (44%), Gaps = 10/342 (2%)
Query: 79 IFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHA 138
+F ++TII ++S+F +M G+ +TY L + + G +
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 287
Query: 139 HIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAKCG 194
++ + N L+ ++ G + A++++ + + N++++N+++DGY
Sbjct: 288 DMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN 347
Query: 195 EMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMV 250
+ A+ + + M D+ +++SLI GY + M VF + G AN VT
Sbjct: 348 RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYS 407
Query: 251 SVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR 310
++ G ++ + + + +V +G+ ++ L+D G +E+AL +F + K
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467
Query: 311 KTD--VLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEA 368
K D ++++ +I G+ G VE++ LF + G+K + +TY G + EA
Sbjct: 468 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527
Query: 369 WHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQM 410
+++ G P+ Y ++ R G L + + I +M
Sbjct: 528 NILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/362 (20%), Positives = 163/362 (45%), Gaps = 14/362 (3%)
Query: 55 FSALSNSGDIDYSYRAFSQLSSP----RIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGL 110
+L G ID + F ++ + + +N+++RG + + M+ +
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Query: 111 APDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHK 170
P+ +T+ L + + ++ +I G + N+L+ Y + A+
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354
Query: 171 VFD-SVQEK---NLVSWNSMLDGYAKCGEMVLAHKVFESMSER----DVRSWSSLIDGYV 222
+ D V+ K ++V++ S++ GY + KVF ++S+R + ++S L+ G+
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 223 KAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLV 282
++G+ + A +F++M + G + +T +L G LEK + + + + + L +V
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 283 LQTSLVDMYAKCGAIEEALLVFHGVSKR--KTDVLIWNAMIGGLATHGSVEESLGLFKDM 340
+ T++++ K G +E+A +F + + K +V+ + MI GL GS+ E+ L + M
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Query: 341 QAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQL 400
+ G ++ TY G + + E + CG + + ++D+L A +
Sbjct: 535 EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKR 594
Query: 401 AT 402
T
Sbjct: 595 LT 596
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 134/294 (45%), Gaps = 11/294 (3%)
Query: 69 RAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLL 128
R FS +S+ + + G + K ++++F +M+R P + + A AR
Sbjct: 44 RDFSSISNGNVCFRERLRSGIVDIKKD-DAIALFQEMIRSRPLPSLVDFSRFFSAIARTK 102
Query: 129 NQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQ----EKNLVSWN 184
+ + G ++ + N +I+ + C +A+ V V E + ++N
Sbjct: 103 QFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFN 162
Query: 185 SMLDGY---AKCGE-MVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAV 240
+++ G K E +VL ++ E+ + DV +++S+++G ++G+ A+ + KM
Sbjct: 163 TLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER 222
Query: 241 GPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEA 300
KA+ T +++ + G ++ + K + G+ ++V SLV K G +
Sbjct: 223 NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDG 282
Query: 301 LLVFHGVSKRKT--DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
L+ + R+ +V+ +N ++ G ++E+ L+K+M GI + +TY
Sbjct: 283 ALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 336
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 164/360 (45%), Gaps = 36/360 (10%)
Query: 80 FIWNTIIRGYSNSKNPIQSLSIFL--------------KMLRHGLAPDYLTYPFLAKASA 125
F+ + RGY+ ++ S+ F+ M R G PD ++Y L
Sbjct: 43 FLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHC 102
Query: 126 RLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSV---------- 175
R + + ++++ FI I + S N K+ D V
Sbjct: 103 R----NGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC 158
Query: 176 QEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERD-----VRSWSSLIDGYVKAGEYREA 230
N+V++++ +D + K GE+ LA K F SM +RD V +++ LIDGY KAG+ A
Sbjct: 159 CSPNVVTYSTWIDTFCKSGELQLALKSFHSM-KRDALSPNVVTFTCLIDGYCKAGDLEVA 217
Query: 231 MAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDM 290
++++++MR V N VT +++ G +++ + M+ +V++ + ++ T+++D
Sbjct: 218 VSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDG 277
Query: 291 YAKCGAIEEALLVFHGVSKR--KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKAD 348
+ + G + A+ + + + D+ + +I GL +G ++E+ + +DM+ + D
Sbjct: 278 FFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPD 337
Query: 349 EVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFIC 408
V + G +K A + + L + G P + M+D +A+ GQL A + C
Sbjct: 338 MVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFC 397
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 150/344 (43%), Gaps = 42/344 (12%)
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVS 135
SP + ++T I + S +L F M R L+P+ +T+ L + + E VS
Sbjct: 160 SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219
Query: 136 VHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGE 195
++ + R ++ SL N+V++ +++DG+ K GE
Sbjct: 220 LYKEM--------RRVRMSL-----------------------NVVTYTALIDGFCKKGE 248
Query: 196 MVLAHKVFESMSERDVRS----WSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVS 251
M A +++ M E V ++++IDG+ + G+ AM KM G + +
Sbjct: 249 MQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGV 308
Query: 252 VLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR- 310
++ G L++ + + + + L +V+ T++++ Y K G ++ A+ ++H + +R
Sbjct: 309 IISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERG 368
Query: 311 -KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAW 369
+ DV+ + MI G+A +G + E++ F KA++V Y G E
Sbjct: 369 FEPDVVALSTMIDGIAKNGQLHEAIVYF-----CIEKANDVMYTVLIDALCKEGDFIEVE 423
Query: 370 HFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPME 413
F + + G+ P Y + L + G L A++ +M E
Sbjct: 424 RLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQE 467
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 152/338 (44%), Gaps = 20/338 (5%)
Query: 182 SWNSMLDGYAKCGEMVLAHKVFESM----SERDVRSWSSLIDGYVKAGEYREAMAVFEKM 237
S+NS++ K G++ A + SM E DV S++SLIDG+ + G+ R A V E +
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
Query: 238 RAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPL-----TLVLQTSLVDMYA 292
RA + +VS + K KM+ + V G+ L +V ++ +D +
Sbjct: 118 RASHGFICKPDIVSF---NSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFC 174
Query: 293 KCGAIEEALLVFHGVSKR--KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEV 350
K G ++ AL FH + + +V+ + +I G G +E ++ L+K+M+ V + + V
Sbjct: 175 KSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVV 234
Query: 351 TYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQM 410
TY G ++ A + + + + P+S Y ++D + G A +F+ +M
Sbjct: 235 TYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKM 294
Query: 411 ---PMEPTASMLGALLSG-CINHRNFELAEIV-GRKLIELEPDHDGRYIGLSNVYAGVKR 465
M + G ++SG C N + E EIV + +L PD + + N Y R
Sbjct: 295 LNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDM-VIFTTMMNAYFKSGR 353
Query: 466 WDDARGMREAMERRGVKKSPGFSSVEICGVSRRFIAHD 503
A M + RG + S I G+++ H+
Sbjct: 354 MKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHE 391
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 173/386 (44%), Gaps = 13/386 (3%)
Query: 36 ILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLS-SPRIFIWNTIIRGYSNSKN 94
IL SG D I+ + S +G+I+ + ++S SP + +NTI+R +S
Sbjct: 162 ILEGSGAVPD--VITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGK 219
Query: 95 PIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNS 154
Q++ + +ML+ PD +TY L +A+ R + + + G D N
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 155 LIHMYASCGNIVWAHKVFDSVQ----EKNLVSWNSMLDGYAKCGEMVLAHKVFESMSER- 209
L++ G + A K + + + N+++ N +L G + A K+ M +
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 210 ---DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGK 266
V +++ LI+ + G A+ + EKM G + N ++ +L +++
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 267 MMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRK-TDVLI-WNAMIGGL 324
+ +V G +V +++ K G +E+A+ + + +S + + VLI +N +I GL
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 325 ATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSS 384
A G +++ L +M+A +K D +TY G V EA FF ++ G+ P++
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519
Query: 385 EHYACMVDVLARAGQLATAYQFICQM 410
+ ++ L ++ Q A F+ M
Sbjct: 520 VTFNSIMLGLCKSRQTDRAIDFLVFM 545
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 137/308 (44%), Gaps = 31/308 (10%)
Query: 139 HIIKTGH--EYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEM 196
+++TG E +F++N + H GN+ +++ +++ G+ + G+
Sbjct: 111 QMVRTGELEEGFKFLENMVYH-----GNV------------PDIIPCTTLIRGFCRLGKT 153
Query: 197 VLAHKVFE----SMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
A K+ E S + DV +++ +I GY KAGE A++V ++M +V P VT ++
Sbjct: 154 RKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM-SVSPDV--VTYNTI 210
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR-- 310
L + G L++ + ++ ++ T L++ + + A+ + + R
Sbjct: 211 LRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGC 270
Query: 311 KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWH 370
DV+ +N ++ G+ G ++E++ DM + G + + +T+ G +A
Sbjct: 271 TPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEK 330
Query: 371 FFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPM---EPTASMLGALLSGCI 427
+ + G +PS + +++ L R G L A + +MP +P + LL G
Sbjct: 331 LLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFC 390
Query: 428 NHRNFELA 435
+ + A
Sbjct: 391 KEKKMDRA 398
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/362 (19%), Positives = 151/362 (41%), Gaps = 16/362 (4%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P I T+IRG+ ++ I + G PD +TY + + +SV
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAK 192
+ + D N+++ G + A +V D + ++ +++++ +++ +
Sbjct: 195 ---LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 193 CGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVT 248
+ A K+ + M +R DV +++ L++G K G EA+ M + G + N +T
Sbjct: 252 DSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311
Query: 249 MVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVS 308
+L + G + + ++ G ++V L++ + G + A+ + +
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371
Query: 309 KR--KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVK 366
+ + + L +N ++ G ++ ++ + M + G D VTY G V+
Sbjct: 372 QHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 367 EAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQM---PMEPTASMLGALL 423
+A L G +P Y ++D LA+AG+ A + + +M ++P +L+
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491
Query: 424 SG 425
G
Sbjct: 492 GG 493
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 167/385 (43%), Gaps = 21/385 (5%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTY-PFL---AKASARLLNQET 132
P + NT++ G S +++ + KM+ +G P+ +TY P L K+ L E
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLD 188
+ IK D + +I G++ A +F+ ++ K N++++N ++
Sbjct: 251 LRKMEERNIK----LDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 189 GYAKCGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKA 244
G+ G K+ M +R +V ++S LID +VK G+ REA + ++M G
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 245 NEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVF 304
+ +T S++ L+K M +V G + L++ Y K I++ L +F
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 305 HGVSKRKT--DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHG 362
+S R D + +N +I G G + + LF++M + + + VTY
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Query: 363 GLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPM---EPTASML 419
G ++A FE ++K M Y ++ + A ++ A+ C +P+ +P
Sbjct: 487 GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTY 546
Query: 420 GALLSGCINHRNFELAEIVGRKLIE 444
++ G AE++ RK+ E
Sbjct: 547 NIMIGGLCKKGPLSEAELLFRKMEE 571
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 142/349 (40%), Gaps = 37/349 (10%)
Query: 55 FSALSNSGDIDYSYRAFSQLS----SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGL 110
L G +D ++ F+++ + I +N +I G+ N+ + M++ +
Sbjct: 270 IDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI 329
Query: 111 APDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHK 170
P+ +T+ L + + +H +I G D SLI +
Sbjct: 330 NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC---------- 379
Query: 171 VFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREA 230
+E +L N M+D G + ++R+++ LI+GY KA +
Sbjct: 380 -----KENHLDKANQMVDLMVSKG------------CDPNIRTFNILINGYCKANRIDDG 422
Query: 231 MAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDM 290
+ +F KM G A+ VT +++ LG L K + + +V +P +V L+D
Sbjct: 423 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Query: 291 YAKCGAIEEALLVFHGVSKRKT--DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKAD 348
G E+AL +F + K K D+ I+N +I G+ V+++ LF + G+K
Sbjct: 483 LCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPG 542
Query: 349 EVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARA 397
TY G + EA F +++ G P Y ++L RA
Sbjct: 543 VKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY----NILIRA 587
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 139/313 (44%), Gaps = 10/313 (3%)
Query: 179 NLVSWNSMLDGYAKCGEMVLAH----KVFESMSERDVRSWSSLIDGYVKAGEYREAMAVF 234
NL + + M++ + +C ++ LA K+ + E + ++S+LI+G G EA+ +
Sbjct: 122 NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 181
Query: 235 EKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKC 294
++M +G K + +T+ +++ G + ++ +V+ G V ++++ K
Sbjct: 182 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS 241
Query: 295 GAIEEALLVFHGVSKR--KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
G A+ + + +R K D + ++ +I GL HGS++ + LF +M+ GI + +TY
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 301
Query: 353 XXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQM-- 410
+ G + + K + P+ ++ ++D + G+L A + +M
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 361
Query: 411 -PMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEPDHDGRYIG-LSNVYAGVKRWDD 468
+ P +L+ G + + A + ++ D + R L N Y R DD
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDD 421
Query: 469 ARGMREAMERRGV 481
+ M RGV
Sbjct: 422 GLELFRKMSLRGV 434
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 142/354 (40%), Gaps = 32/354 (9%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P + ++ + + +K L++ +M G+A + T + R S
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEM 196
IIK G+E + ++LI+ G + A ++ D + E
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE------------------- 186
Query: 197 VLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCAC 256
+ HK D+ + ++L++G +G+ EAM + +KM G + N VT VL
Sbjct: 187 -MGHK-------PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVM 238
Query: 257 AHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR--KTDV 314
G + + + + + L V + ++D K G+++ A +F+ + + T++
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNI 298
Query: 315 LIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFES 374
+ +N +IGG G ++ L +DM I + VT+ G ++EA +
Sbjct: 299 ITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKE 358
Query: 375 LDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMP---MEPTASMLGALLSG 425
+ G+ P + Y ++D + L A Q + M +P L++G
Sbjct: 359 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 412
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 163/373 (43%), Gaps = 14/373 (3%)
Query: 52 VLCFSALSNSGDIDYSYRAFSQLSS----PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLR 107
+C L +G I+ +Y ++ P + + +I ++ + +F KM
Sbjct: 262 TICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKT 321
Query: 108 HGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVW 167
PD +TY L + + ++ + + K GH D L+ GN
Sbjct: 322 GRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGE 381
Query: 168 AHKVFDSVQEK----NLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVR----SWSSLID 219
A D ++++ NL ++N+++ G + + A ++F +M V+ ++ ID
Sbjct: 382 AFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFID 441
Query: 220 GYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPL 279
Y K+G+ A+ FEKM+ G N V + L + A G + K + + D GL
Sbjct: 442 YYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVP 501
Query: 280 TLVLQTSLVDMYAKCGAIEEALLVFHGVSKR--KTDVLIWNAMIGGLATHGSVEESLGLF 337
V ++ Y+K G I+EA+ + + + + DV++ N++I L V+E+ +F
Sbjct: 502 DSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMF 561
Query: 338 KDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARA 397
M+ + +K VTY G ++EA FE + + G P++ + + D L +
Sbjct: 562 MRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKN 621
Query: 398 GQLATAYQFICQM 410
++ A + + +M
Sbjct: 622 DEVTLALKMLFKM 634
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 155/324 (47%), Gaps = 14/324 (4%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P++ +N +I G + + +FL++ G PD TY FL A + + +
Sbjct: 783 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKV-FDSVQEKNL----VSWNSMLDGYA 191
+ + E + N +I GN+ A + +D + +++ ++ ++DG +
Sbjct: 843 YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902
Query: 192 KCGEMVLAHKVFESMSERDVRS----WSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEV 247
K G + A ++FE M + R ++ LI+G+ KAGE A A+F++M G + +
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962
Query: 248 TM-VSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHG 306
T V V C C +G +++G K + ++GL +V +++ K +EEAL++F+
Sbjct: 963 TYSVLVDCLCM-VGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNE 1021
Query: 307 VSKRK---TDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGG 363
+ + D+ +N++I L G VEE+ ++ ++Q G++ + T+ G
Sbjct: 1022 MKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSG 1081
Query: 364 LVKEAWHFFESLDKCGMTPSSEHY 387
+ A+ ++++ G +P++ Y
Sbjct: 1082 KPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 141/337 (41%), Gaps = 13/337 (3%)
Query: 81 IWNTIIRGYSNSKNPIQSLSIFLKMLRH-GLAPDYLTYPFLAKASARLLNQETGVSVHAH 139
I IIR N + ++F K + G+ P TY L E V
Sbjct: 751 ILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQ 810
Query: 140 IIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQ----EKNLVSWNSMLDGYAKCGE 195
+ TG D N L+ Y G I +++ + E N ++ N ++ G K G
Sbjct: 811 VKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGN 870
Query: 196 MVLAHKVF-ESMSERDVR----SWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMV 250
+ A ++ + MS+RD ++ LIDG K+G EA +FE M G + N
Sbjct: 871 VDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYN 930
Query: 251 SVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGV--S 308
++ G + + K +V G+ L + LVD G ++E L F + S
Sbjct: 931 ILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES 990
Query: 309 KRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQ-AVGIKADEVTYXXXXXXXXHGGLVKE 367
DV+ +N +I GL +EE+L LF +M+ + GI D TY G+V+E
Sbjct: 991 GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE 1050
Query: 368 AWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAY 404
A + + + G+ P+ + ++ + +G+ AY
Sbjct: 1051 AGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAY 1087
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 159/384 (41%), Gaps = 52/384 (13%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTY----PFLAKAS-------- 124
P +F +NTII G + +++ F +M + + PD++T P + KAS
Sbjct: 641 PDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKI 699
Query: 125 ------------ARLLNQETGVSV--HAHIIKTGHEYDRFIQNSLIH---------MYAS 161
A L ++ S+ A I +R + N + + S
Sbjct: 700 ITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYS 759
Query: 162 C--GNIVWAHKVFDS------VQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSER---- 209
C N+ A +F+ VQ K L ++N ++ G + + +A VF +
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPK-LPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIP 818
Query: 210 DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKG-KMM 268
DV +++ L+D Y K+G+ E ++++M +AN +T V+ G ++ +
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 269 HKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR--KTDVLIWNAMIGGLAT 326
+ + D T L+D +K G + EA +F G+ + + I+N +I G
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 327 HGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEH 386
G + + LFK M G++ D TY G V E H+F+ L + G+ P
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVC 998
Query: 387 YACMVDVLARAGQLATAYQFICQM 410
Y +++ L ++ +L A +M
Sbjct: 999 YNLIINGLGKSHRLEEALVLFNEM 1022
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/373 (19%), Positives = 157/373 (42%), Gaps = 15/373 (4%)
Query: 49 ISKVLCFSALSNSGDIDYSYRAFSQLSS----PRIFIWNTIIRGYSNSKNPIQSLSIFLK 104
++ + S++ D+D + +S++ P + + ++ + N ++
Sbjct: 329 VTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDV 388
Query: 105 MLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGN 164
M G+ P+ TY L R+ + + + ++ G + + I Y G+
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD 448
Query: 165 IVWAHKVFDSVQEK----NLVSWNSMLDGYAKCGEMVLAHKVFESMSE----RDVRSWSS 216
V A + F+ ++ K N+V+ N+ L AK G A ++F + + D +++
Sbjct: 449 SVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNM 508
Query: 217 LIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNG 276
++ Y K GE EA+ + +M G + + + + S++ +++ M + +
Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 568
Query: 277 LPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR--KTDVLIWNAMIGGLATHGSVEESL 334
L T+V +L+ K G I+EA+ +F G+ ++ + + +N + L + V +L
Sbjct: 569 LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLAL 628
Query: 335 GLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVL 394
+ M +G D TY G VKEA FF + K + P ++ +
Sbjct: 629 KMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGV 687
Query: 395 ARAGQLATAYQFI 407
+A + AY+ I
Sbjct: 688 VKASLIEDAYKII 700
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 82/439 (18%), Positives = 170/439 (38%), Gaps = 58/439 (13%)
Query: 29 ELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSS----PRIFIWNT 84
E +L + ++ +G D ++ ++ + L + +D +++ F ++ P + +NT
Sbjct: 521 EAIKLLSEMMENGCEPDVIVVNSLI--NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578
Query: 85 IIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHA--HIIK 142
++ G + +++ +F M++ G P+ +T+ L + N E +++ ++
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK--NDEVTLALKMLFKMMD 636
Query: 143 TGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQE---KNLVSWNSMLDGYAKCGEMVLA 199
G D F N++I G + A F +++ + V+ ++L G K + A
Sbjct: 637 MGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDA 696
Query: 200 HKV-----FESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVG--PKANEVTMVSV 252
+K+ + + W LI + A++ E++ A G + + + +
Sbjct: 697 YKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPII 756
Query: 253 LCACAHLGALEKGKMMHKYIVDNG----LPL------------------TLVLQTS---- 286
+C H + K+ D G LP + LQ
Sbjct: 757 RYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGC 816
Query: 287 ---------LVDMYAKCGAIEEALLVFHGVSKRK--TDVLIWNAMIGGLATHGSVEESLG 335
L+D Y K G I+E ++ +S + + + N +I GL G+V+++L
Sbjct: 817 IPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALD 876
Query: 336 LFKD-MQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVL 394
L+ D M TY G + EA FE + G P+ Y +++
Sbjct: 877 LYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGF 936
Query: 395 ARAGQLATAYQFICQMPME 413
+AG+ A +M E
Sbjct: 937 GKAGEADAACALFKRMVKE 955
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 87/196 (44%), Gaps = 16/196 (8%)
Query: 62 GDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLA 121
G +DY R P I+N +I G+ + + ++F +M++ G+ PD TY L
Sbjct: 916 GMLDYGCR-------PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 968
Query: 122 KASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK--- 178
+ + G+ + ++G D N +I+ + A +F+ ++
Sbjct: 969 DCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGI 1028
Query: 179 --NLVSWNSMLDGYAKCGEMVLAHKVFESMS----ERDVRSWSSLIDGYVKAGEYREAMA 232
+L ++NS++ G + A K++ + E +V ++++LI GY +G+ A A
Sbjct: 1029 TPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYA 1088
Query: 233 VFEKMRAVGPKANEVT 248
V++ M G N T
Sbjct: 1089 VYQTMVTGGFSPNTGT 1104
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 82/188 (43%), Gaps = 2/188 (1%)
Query: 225 GEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQ 284
G+ E VF+ M+ K + T +++ + + G L++ + + + G L
Sbjct: 132 GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSY 191
Query: 285 TSLVDMYAKCGAIEEALLVFHG--VSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQA 342
L+ + K EA+ V+ + + + +++++ GL ++ +GL K+M+
Sbjct: 192 NGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMET 251
Query: 343 VGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLAT 402
+G+K + T+ G + EA+ + +D G P Y ++D L A +L
Sbjct: 252 LGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDC 311
Query: 403 AYQFICQM 410
A + +M
Sbjct: 312 AKEVFEKM 319
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 172/388 (44%), Gaps = 16/388 (4%)
Query: 37 LITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRI----FIWNTIIRGYSNS 92
++ G DE VL + L SG+ + F ++ I ++ +I
Sbjct: 201 MVEYGFQPDEVTYGPVL--NRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKD 258
Query: 93 KNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQ 152
+ +LS+F +M G+ D +TY L + G + +I D
Sbjct: 259 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 318
Query: 153 NSLIHMYASCGNIVWAHKVFDSVQEKNL----VSWNSMLDGYAKCGEMVLAHKVFESM-- 206
++LI ++ G ++ A ++++ + + + +++NS++DG+ K + A+++F+ M
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 207 --SERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEK 264
E D+ ++S LI+ Y KA + M +F ++ + G N +T +++ G L
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 438
Query: 265 GKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTD--VLIWNAMIG 322
K + + +V G+P ++V L+D G + +AL +F + K + + I+N +I
Sbjct: 439 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 498
Query: 323 GLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTP 382
G+ V+++ LF + G+K D VTY G + EA F + + G TP
Sbjct: 499 GMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP 558
Query: 383 SSEHYACMVDVLARAGQLATAYQFICQM 410
Y ++ L ++ + I +M
Sbjct: 559 DDFTYNILIRAHLGGSGLISSVELIEEM 586
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 173/388 (44%), Gaps = 27/388 (6%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTY-PFLAKASARLLNQETGVS 135
P + +T+I G ++L + +M+ +G PD +TY P L + ++G S
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLC------KSGNS 226
Query: 136 VHAHIIKTGHEYDRFIQNSLIH----MYASC--GNIVWAHKVFDSVQEK----NLVSWNS 185
A + E +R I+ S++ + + C G+ A +F+ ++ K ++V+++S
Sbjct: 227 ALALDLFRKME-ERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 285
Query: 186 MLDGYAKCGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVG 241
++ G G+ K+ M R DV ++S+LID +VK G+ EA ++ +M G
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Query: 242 PKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEAL 301
+ +T S++ L + M +V G +V + L++ Y K +++ +
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 405
Query: 302 LVFHGVSKRK--TDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXX 359
+F +S + + + +N ++ G G + + LF++M + G+ VTY
Sbjct: 406 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL 465
Query: 360 XHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMP---MEPTA 416
G + +A FE + K MT Y ++ + A ++ A+ C + ++P
Sbjct: 466 CDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDV 525
Query: 417 SMLGALLSGCINHRNFELAEIVGRKLIE 444
++ G + A+++ RK+ E
Sbjct: 526 VTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 141/319 (44%), Gaps = 10/319 (3%)
Query: 97 QSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLI 156
++ +F M++ P + + L A AR + + + G E+D + +I
Sbjct: 53 DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 112
Query: 157 HMYASCGNIVWAHKVFDSV----QEKNLVSWNSMLDGYAKCGEM----VLAHKVFESMSE 208
+ Y +++A V E + ++++++++G+ G + L ++ E
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 209 RDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMM 268
D+ + S+LI+G G EA+ + ++M G + +EVT VL G +
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 269 HKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR--KTDVLIWNAMIGGLAT 326
+ + + + ++V + ++D K G+ ++AL +F+ + + K DV+ ++++IGGL
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 327 HGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEH 386
G ++ + ++M I D VT+ G + EA + + G+ P +
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 352
Query: 387 YACMVDVLARAGQLATAYQ 405
Y ++D + L A Q
Sbjct: 353 YNSLIDGFCKENCLHEANQ 371
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 107/258 (41%), Gaps = 41/258 (15%)
Query: 27 MLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTII 86
+LE K+L+ +IT G+ +P +N++I
Sbjct: 331 LLEAKELYNEMITRGI---------------------------------APDTITYNSLI 357
Query: 87 RGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHE 146
G+ ++ +F M+ G PD +TY L + + + G+ + I G
Sbjct: 358 DGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI 417
Query: 147 YDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAKCGEMVLAHKV 202
+ N+L+ + G + A ++F + + ++V++ +LDG GE+ A ++
Sbjct: 418 PNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEI 477
Query: 203 FESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAH 258
FE M + + ++ +I G A + +A ++F + G K + VT ++
Sbjct: 478 FEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCK 537
Query: 259 LGALEKGKMMHKYIVDNG 276
G+L + M+ + + ++G
Sbjct: 538 KGSLSEADMLFRKMKEDG 555
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/430 (21%), Positives = 190/430 (44%), Gaps = 18/430 (4%)
Query: 69 RAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLL 128
R Q SP + + +I+G ++ ++ ++L+ G+ P +TY L +
Sbjct: 381 RMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCG 440
Query: 129 NQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAH----KVFDSVQEKNLVSWN 184
N +G +++ +IK G+ D I L+ + G ++ A K+ N+V +N
Sbjct: 441 NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFN 500
Query: 185 SMLDGYAKCGEMVLAHKVFESMS----ERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAV 240
S++DG+ + A KVF M + DV ++++++ + G EA+ +F +M +
Sbjct: 501 SLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKM 560
Query: 241 GPKANEVTMVSVLCA-CAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEE 299
G + + + +++ A C H+ G + + N + + + ++ + KC IE+
Sbjct: 561 GLEPDALAYCTLIDAFCKHMKP-TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIED 619
Query: 300 ALLVFHGV--SKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXX 357
A F+ + K + D++ +N MI G + ++E+ +F+ ++ + VT
Sbjct: 620 ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIH 679
Query: 358 XXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMP---MEP 414
+ A F + + G P++ Y C++D +++ + +++ +M + P
Sbjct: 680 VLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP 739
Query: 415 TASMLGALLSG-CINHRNFELAEIVGRKL-IELEPDHDGRYIGLSNVYAGVKRWDDARGM 472
+ ++ G C R E I + + +L PD Y L Y V R +A +
Sbjct: 740 SIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVA-YAILIRGYCKVGRLVEAALL 798
Query: 473 REAMERRGVK 482
E M R GVK
Sbjct: 799 YEHMLRNGVK 808
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 163/377 (43%), Gaps = 57/377 (15%)
Query: 154 SLIHMYASCGNIVWAHKVFDSVQ----EKNLVSWNSMLDGYAKCGEMVLAHKVFESMSER 209
+LI+ + G + A +F ++ E +L+++++++DGY K G + + HK+F +
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350
Query: 210 ----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKG 265
DV +SS ID YVK+G+ A V+++M G N VT ++ G + +
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 266 KMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFH-------------------G 306
M+ I+ G+ ++V +SL+D + KCG + ++ G
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 307 VSKR------------------KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKAD 348
+SK+ + +V+++N++I G +E+L +F+ M GIK D
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 349 EVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFIC 408
T+ G ++EA F + K G+ P + Y ++D + + Q
Sbjct: 531 VATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFD 590
Query: 409 QMPMEPTASMLGA------LLSGCINHRNFELAEIVGRKLIE--LEPDHDGRYIGLSNVY 460
M ++ + LL C HR E A LIE +EPD Y + Y
Sbjct: 591 LMQRNKISADIAVCNVVIHLLFKC--HR-IEDASKFFNNLIEGKMEPDI-VTYNTMICGY 646
Query: 461 AGVKRWDDARGMREAME 477
++R D+A + E ++
Sbjct: 647 CSLRRLDEAERIFELLK 663
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 131/284 (46%), Gaps = 10/284 (3%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P + + T++R ++L +F +M + GL PD L Y L A + + G+ +
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQL 588
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSV----QEKNLVSWNSMLDGYAK 192
+ + D + N +IH+ C I A K F+++ E ++V++N+M+ GY
Sbjct: 589 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 648
Query: 193 CGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVT 248
+ A ++FE + + + + LI K + A+ +F M G K N VT
Sbjct: 649 LRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVT 708
Query: 249 MVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGV- 307
++ + +E + + + + G+ ++V + ++D K G ++EA +FH
Sbjct: 709 YGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 768
Query: 308 -SKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEV 350
+K DV+ + +I G G + E+ L++ M G+K D++
Sbjct: 769 DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 139/342 (40%), Gaps = 18/342 (5%)
Query: 66 YSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASA 125
+S + Q + ++N++I G+ ++L +F M +G+ PD T+ + + S
Sbjct: 483 FSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSI 542
Query: 126 RLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLV 181
E + + + K G E D +LI + ++FD +Q ++
Sbjct: 543 MEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIA 602
Query: 182 SWNSMLDGYAKCGEMVLAHKVF----ESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKM 237
N ++ KC + A K F E E D+ +++++I GY EA +FE +
Sbjct: 603 VCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 662
Query: 238 RAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAI 297
+ N VT+ ++ ++ M + + G V L+D ++K I
Sbjct: 663 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDI 722
Query: 298 EEALLVFHGVSKR--KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXX 355
E + +F + ++ ++ ++ +I GL G V+E+ +F + D V Y
Sbjct: 723 EGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAIL 782
Query: 356 XXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARA 397
G + EA +E + + G+ P D+L RA
Sbjct: 783 IRGYCKVGRLVEAALLYEHMLRNGVKPD--------DLLQRA 816
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 85/190 (44%), Gaps = 5/190 (2%)
Query: 241 GPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEA 300
GP N VT +++ G +++ + K + G+ L+ ++L+D Y K G +
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 301 LLVFHGVSKR--KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXX 358
+F + K DV+++++ I G + + ++K M GI + VTY
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 359 XXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATA---YQFICQMPMEPT 415
G + EA+ + + K GM PS Y+ ++D + G L + Y+ + +M P
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 416 ASMLGALLSG 425
+ G L+ G
Sbjct: 461 VVIYGVLVDG 470
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 166/363 (45%), Gaps = 16/363 (4%)
Query: 70 AFSQLSS----PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASA 125
AFS++ P ++ T+I G+ + + F +M + PD LTY +
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 126 RLLNQ-ETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQE----KNL 180
++ + E G H K G E D LI+ Y G++ A +V + + + N+
Sbjct: 398 QIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 181 VSWNSMLDGYAKCGEMVLAHKVFESM----SERDVRSWSSLIDGYVKAGEYREAMAVFEK 236
V++ +++DG K G++ A+++ M + ++ +++S+++G K+G EA+ + +
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 237 MRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGA 296
A G A+ VT +++ A G ++K + + K ++ GL T+V L++ + G
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 297 IE--EALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXX 354
+E E LL + + +N+++ +++ + ++KDM + G+ D TY
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Query: 355 XXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEP 414
+KEAW F+ + G + S Y+ ++ + + A + QM E
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
Query: 415 TAS 417
A+
Sbjct: 697 LAA 699
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 183/428 (42%), Gaps = 42/428 (9%)
Query: 66 YSYRAFSQLSSPRIF-IWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYP-FLAKA 123
Y+Y+ + S PR+F ++ ++ + + ++ +F KML +GL + +L +
Sbjct: 166 YTYKDWG--SDPRVFDVFFQVLVDFGLLR---EARRVFEKMLNYGLVLSVDSCNVYLTRL 220
Query: 124 SARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSW 183
S T + V + G ++ N +IH G I AH + ++
Sbjct: 221 SKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLME------- 273
Query: 184 NSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPK 243
L GY DV S+S++++GY + GE + + E M+ G K
Sbjct: 274 ---LKGYTP-----------------DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLK 313
Query: 244 ANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLV 303
N S++ + L + + ++ G+ V+ T+L+D + K G I A
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKF 373
Query: 304 FHGVSKRKT--DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXH 361
F+ + R DVL + A+I G G + E+ LF +M G++ D VT+
Sbjct: 374 FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCK 433
Query: 362 GGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQM---PMEPTASM 418
G +K+A+ + + G +P+ Y ++D L + G L +A + + +M ++P
Sbjct: 434 AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT 493
Query: 419 LGALLSGCINHRNFELA-EIVGR-KLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAM 476
++++G N E A ++VG + L D Y L + Y D A+ + + M
Sbjct: 494 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD-TVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 477 ERRGVKKS 484
+G++ +
Sbjct: 553 LGKGLQPT 560
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 166/363 (45%), Gaps = 16/363 (4%)
Query: 70 AFSQLSS----PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASA 125
AFS++ P ++ T+I G+ + + F +M + PD LTY +
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 126 RLLNQ-ETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQE----KNL 180
++ + E G H K G E D LI+ Y G++ A +V + + + N+
Sbjct: 398 QIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 181 VSWNSMLDGYAKCGEMVLAHKVFESM----SERDVRSWSSLIDGYVKAGEYREAMAVFEK 236
V++ +++DG K G++ A+++ M + ++ +++S+++G K+G EA+ + +
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 237 MRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGA 296
A G A+ VT +++ A G ++K + + K ++ GL T+V L++ + G
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 297 IE--EALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXX 354
+E E LL + + +N+++ +++ + ++KDM + G+ D TY
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Query: 355 XXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEP 414
+KEAW F+ + G + S Y+ ++ + + A + QM E
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
Query: 415 TAS 417
A+
Sbjct: 697 LAA 699
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 183/428 (42%), Gaps = 42/428 (9%)
Query: 66 YSYRAFSQLSSPRIF-IWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYP-FLAKA 123
Y+Y+ + S PR+F ++ ++ + + ++ +F KML +GL + +L +
Sbjct: 166 YTYKDWG--SDPRVFDVFFQVLVDFGLLR---EARRVFEKMLNYGLVLSVDSCNVYLTRL 220
Query: 124 SARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSW 183
S T + V + G ++ N +IH G I AH + ++
Sbjct: 221 SKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLME------- 273
Query: 184 NSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPK 243
L GY DV S+S++++GY + GE + + E M+ G K
Sbjct: 274 ---LKGYTP-----------------DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLK 313
Query: 244 ANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLV 303
N S++ + L + + ++ G+ V+ T+L+D + K G I A
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKF 373
Query: 304 FHGVSKRKT--DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXH 361
F+ + R DVL + A+I G G + E+ LF +M G++ D VT+
Sbjct: 374 FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCK 433
Query: 362 GGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQM---PMEPTASM 418
G +K+A+ + + G +P+ Y ++D L + G L +A + + +M ++P
Sbjct: 434 AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT 493
Query: 419 LGALLSGCINHRNFELA-EIVGR-KLIELEPDHDGRYIGLSNVYAGVKRWDDARGMREAM 476
++++G N E A ++VG + L D Y L + Y D A+ + + M
Sbjct: 494 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD-TVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 477 ERRGVKKS 484
+G++ +
Sbjct: 553 LGKGLQPT 560
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 182/405 (44%), Gaps = 21/405 (5%)
Query: 60 NSGDIDYSYRAFSQL----SSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYL 115
+ G++D F ++ SP +NT+IRG+ ++ IF M+ G+ P+
Sbjct: 259 DCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVY 318
Query: 116 TYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSV 175
TY L + + + + +I+ E + N +I+ G + A ++ + +
Sbjct: 319 TYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELM 378
Query: 176 QEKNL----VSWNSMLDGYAKCGEMVLAHKVF------ESMSERDVRSWSSLIDGYVKAG 225
+++ +++N +L G G++ A K+ S ++ DV S+++LI G K
Sbjct: 379 KKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKEN 438
Query: 226 EYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQT 285
+A+ +++ + + VT +L + G + K + K I D+ + T
Sbjct: 439 RLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYT 498
Query: 286 SLVDMYAKCGAIEEA--LLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAV 343
+++D + K G + A LL VS+ + V +N ++ L GS++++ LF++MQ
Sbjct: 499 AMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRD 558
Query: 344 GIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATA 403
D V++ G +K A + + G++P Y+ +++ + G L A
Sbjct: 559 NNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEA 618
Query: 404 YQFICQM---PMEPTASMLGALLSGCINH-RNFELAEIVGRKLIE 444
F +M EP A + ++L CI+ +L E+V +KL++
Sbjct: 619 ISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELV-KKLVD 662
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 174/398 (43%), Gaps = 32/398 (8%)
Query: 42 LSQDEPFISKVL---CFSALSNS-GDIDYSYRAFSQLSSPRI------------------ 79
L +DE + K+L +S L N+ + + R+ + S+P++
Sbjct: 13 LRRDEHVVRKLLNPRVYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLA 72
Query: 80 FIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAH 139
F N ++ S+N + S + KML ++++ L + ++ V A
Sbjct: 73 FAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLAL 132
Query: 140 IIKTGHEYDRFIQNSLIHMYA---SCGNIV-WAHKVFDSVQEKNLVSWNSMLDGYAKCGE 195
++K G ++ + N L+ CG V ++ + ++ S+N+++ G+ + E
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 196 MV----LAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVS 251
+ LA+++ S + +W LID + KAG+ EAM ++M+ +G +A+ V S
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 252 VLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR- 310
++ G L++GK + +++ G + +L+ + K G ++EA +F + +R
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 311 -KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAW 369
+ +V + +I GL G +E+L L M + + VTY GLV +A
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372
Query: 370 HFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFI 407
E + K P + Y ++ L G L A + +
Sbjct: 373 EIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 118/290 (40%), Gaps = 49/290 (16%)
Query: 49 ISKVLCFSALSNSGDIDYSYRAF------SQLSSPRIFIWNTIIRGYSNSKNPIQSLSIF 102
I+ + L GD+D + + S + P + +N +I G Q+L I+
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIY 447
Query: 103 LKMLRHGLAPDYLTYPFLAKASAR-------------------LLNQETGVSVHAHIIKT 143
++ A D +T L ++ + + N +T ++ KT
Sbjct: 448 DLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKT 507
Query: 144 GH----------------EYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKN----LVSW 183
G + F N L+ G++ A ++F+ +Q N +VS+
Sbjct: 508 GMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSF 567
Query: 184 NSMLDGYAKCGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRA 239
N M+DG K G++ A + MS D+ ++S LI+ ++K G EA++ F+KM
Sbjct: 568 NIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVD 627
Query: 240 VGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVD 289
G + + SVL C G +K + K +VD + L L +++D
Sbjct: 628 SGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMD 677
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 16/196 (8%)
Query: 9 KIANLNQTLLSLLDG-CKSMLELKQLHAILITSGLSQDEPFISKVLCF-SALSNSGDIDY 66
KI + T +++DG CK+ + L +L +S+ +P + C S+L G +D
Sbjct: 489 KIVRNSDTYTAMIDGFCKTGM-LNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQ 547
Query: 67 SYRAFSQLSS----PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAK 122
++R F ++ P + +N +I G + + + S+ + M R GL+PD TY L
Sbjct: 548 AWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Query: 123 ASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQE--KNL 180
+L + +S ++ +G E D I +S++ S G D + E K L
Sbjct: 608 RFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGET-------DKLTELVKKL 660
Query: 181 VSWNSMLDGYAKCGEM 196
V + +LD C M
Sbjct: 661 VDKDIVLDKELTCTVM 676
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/455 (21%), Positives = 198/455 (43%), Gaps = 26/455 (5%)
Query: 56 SALSNSGDIDYSYRAFSQLS----SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLA 111
SA S+ G ++ ++ + + SP ++ +NT+I G ++ +F +MLR GL+
Sbjct: 278 SAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLS 337
Query: 112 PDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKV 171
PD TY L + + + V + + D +S++ ++ GN+ A
Sbjct: 338 PDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMY 397
Query: 172 FDSVQEKNLVSWNS----MLDGYAKCGEMVLAHKVFESMSER----DVRSWSSLIDGYVK 223
F+SV+E L+ N ++ GY + G + +A + M ++ DV ++++++ G K
Sbjct: 398 FNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCK 457
Query: 224 AGEYREAMAVFEKM--RAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTL 281
EA +F +M RA+ P + +T++ + LG L+ + + + + + L +
Sbjct: 458 RKMLGEADKLFNEMTERALFPDSYTLTIL--IDGHCKLGNLQNAMELFQKMKEKRIRLDV 515
Query: 282 VLQTSLVDMYAKCGAIEEALLVFHG-VSKRKTDVLI-WNAMIGGLATHGSVEESLGLFKD 339
V +L+D + K G I+ A ++ VSK I ++ ++ L + G + E+ ++ +
Sbjct: 516 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDE 575
Query: 340 MQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQ 399
M + IK + G + F E + G P Y ++ R
Sbjct: 576 MISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREEN 635
Query: 400 LATAYQFICQMPME-----PTASMLGALLSGCINHRNFELAEIVGRKLIE--LEPDHDGR 452
++ A+ + +M E P ++L G + AE+V RK+IE + PD
Sbjct: 636 MSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDR-ST 694
Query: 453 YIGLSNVYAGVKRWDDARGMREAMERRGVKKSPGF 487
Y + N + +A + + M +RG F
Sbjct: 695 YTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDKF 729
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 177/394 (44%), Gaps = 24/394 (6%)
Query: 31 KQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSS----PRIFIWNTII 86
K++ A ++ SGLS D +L + GD+ + + FS + S P + +++++
Sbjct: 325 KEVFAEMLRSGLSPDSTTYRSLLMEAC--KKGDVVETEKVFSDMRSRDVVPDLVCFSSMM 382
Query: 87 RGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHE 146
++ S N ++L F + GL PD + Y L + R +++ +++ G
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCA 442
Query: 147 YDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLV----SWNSMLDGYAKCGEMVLAHKV 202
D N+++H + A K+F+ + E+ L + ++DG+ K G + A ++
Sbjct: 443 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL 502
Query: 203 FESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKM--RAVGPKANEVT-MVSVLCA 255
F+ M E+ DV ++++L+DG+ K G+ A ++ M + + P + +V+ LC+
Sbjct: 503 FQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS 562
Query: 256 CAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIE--EALLVFHGVSKRKTD 313
HL E ++ + I N P T+++ S++ Y + G E+ L D
Sbjct: 563 KGHLA--EAFRVWDEMISKNIKP-TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPD 619
Query: 314 VLIWNAMIGGLATHGSVEESLGLFKDMQAV--GIKADEVTYXXXXXXXXHGGLVKEAWHF 371
+ +N +I G ++ ++ GL K M+ G+ D TY +KEA
Sbjct: 620 CISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVV 679
Query: 372 FESLDKCGMTPSSEHYACMVDVLARAGQLATAYQ 405
+ + G+ P Y CM++ L A++
Sbjct: 680 LRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFR 713
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 171/395 (43%), Gaps = 14/395 (3%)
Query: 28 LELKQLHAILITSG-LSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTII 86
L L + IL+ SG LS + + +++ S +S ++ FS S +++ +I
Sbjct: 114 LSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDS-VFDLLI 172
Query: 87 RGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHE 146
R Y ++ ++ F + G L + R+ E V+ I ++G
Sbjct: 173 RTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVG 232
Query: 147 YDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAKCGEMVLAHKV 202
+ + N +++ G + VQEK ++V++N+++ Y+ G M A ++
Sbjct: 233 INVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFEL 292
Query: 203 FESMSERD----VRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLC-ACA 257
+M + V +++++I+G K G+Y A VF +M G + T S+L AC
Sbjct: 293 MNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 352
Query: 258 HLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRK--TDVL 315
+E K+ + +P LV +S++ ++ + G +++AL+ F+ V + D +
Sbjct: 353 KGDVVETEKVFSDMRSRDVVP-DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNV 411
Query: 316 IWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESL 375
I+ +I G G + ++ L +M G D VTY ++ EA F +
Sbjct: 412 IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 471
Query: 376 DKCGMTPSSEHYACMVDVLARAGQLATAYQFICQM 410
+ + P S ++D + G L A + +M
Sbjct: 472 TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 119/223 (53%), Gaps = 9/223 (4%)
Query: 227 YREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTS 286
Y++A+ + +K G + V + +CA+L +LE K +H + + + L
Sbjct: 221 YKDAIELLDK----GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNM 276
Query: 287 LVDMYAKCGAIEEALLVF-HGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGI 345
++ M+ +C +I +A VF H V K D+ W+ M+ + +G +++L LF++M G+
Sbjct: 277 VISMFGECSSITDAKRVFDHMVDK---DMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGL 333
Query: 346 KADEVTYXXXXXXXXHGGLVKEAWHFFESL-DKCGMTPSSEHYACMVDVLARAGQLATAY 404
K +E T+ G ++EA+ F+S+ ++ G++P +EHY ++ VL + G L A
Sbjct: 334 KPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAE 393
Query: 405 QFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLIELEP 447
Q+I +P EPTA A+ + H + +L + + +++++P
Sbjct: 394 QYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDP 436
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 35/231 (15%)
Query: 103 LKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASC 162
+++L G PD + L ++ A L + E VH H +++ D + N +I M+ C
Sbjct: 225 IELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGEC 284
Query: 163 GNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRSWSSLIDGYV 222
+I A +VFD + +K++ SW+ M+ Y+ G M +
Sbjct: 285 SSITDAKRVFDHMVDKDMDSWHLMMCAYSDNG-----------MGD-------------- 319
Query: 223 KAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDN--GLPLT 280
+A+ +FE+M G K NE T ++V ACA +G +E+ +H + N G+
Sbjct: 320 ------DALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEA-FLHFDSMKNEHGISPK 372
Query: 281 LVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVE 331
++ + KCG + EA + T W AM HG ++
Sbjct: 373 TEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPT-ADFWEAMRNYARLHGDID 422
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 193/444 (43%), Gaps = 49/444 (11%)
Query: 17 LLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSS 76
+L+LLDG SM L + F+S VL + DI +S+
Sbjct: 89 ILNLLDGSASMES--NLDGFCRKFLIKLSPNFVSFVLKSDEIREKPDIAWSF-------- 138
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
F W+ + Y+++ SL L LA D F+ S+ + E ++V
Sbjct: 139 ---FCWSRKQKKYTHNLECYVSLVDVL-----ALAKDVDRIRFV---SSEIKKFEFPMTV 187
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNI-----VWAHKVFDSVQEKNLVSWNSMLDGYA 191
A N+LI + G + VW K+ ++ E L ++N +++G
Sbjct: 188 SA-------------ANALIKSFGKLGMVEELLWVW-RKMKENGIEPTLYTYNFLMNGLV 233
Query: 192 KCGEMVLAHKVFESMS----ERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEV 247
+ A +VFE M + D+ +++++I GY KAG+ ++AM M G +A+++
Sbjct: 234 SAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKI 293
Query: 248 TMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGV 307
T ++++ AC +++ + + G+ + + ++ K G + E VF +
Sbjct: 294 TYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENM 353
Query: 308 SKR--KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLV 365
++ K +V I+ +I G A GSVE+++ L M G K D VTY G V
Sbjct: 354 IRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRV 413
Query: 366 KEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTAS---MLGAL 422
+EA +F + G+ +S Y+ ++D L +AG++ A + +M + AL
Sbjct: 414 EEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNAL 473
Query: 423 LSGCINHRNFELAEIVGRKLIELE 446
+ HR + A + +++ E E
Sbjct: 474 IDAFTKHRKVDEAIALFKRMEEEE 497
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 162/363 (44%), Gaps = 13/363 (3%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P ++ +N ++ G ++ + +F M + PD +TY + K + + +
Sbjct: 220 PTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEK 279
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLV----SWNSMLDGYAK 192
+ GHE D+ ++I + + ++ + EK + +++ ++ G K
Sbjct: 280 LRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCK 339
Query: 193 CGEMVLAHKVFESM----SERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVT 248
G++ + VFE+M S+ +V ++ LIDGY K+G +A+ + +M G K + VT
Sbjct: 340 EGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVT 399
Query: 249 MVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVS 308
V+ G +E+ +GL + + +SL+D K G ++EA +F +S
Sbjct: 400 YSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMS 459
Query: 309 KR--KTDVLIWNAMIGGLATHGSVEESLGLFKDM-QAVGIKADEVTYXXXXXXXXHGGLV 365
++ D +NA+I H V+E++ LFK M + G TY
Sbjct: 460 EKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRN 519
Query: 366 KEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPTASMLGALLSG 425
+EA ++ + G+TP++ + + L +G++A A + + ++ P +L A
Sbjct: 520 EEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELA--PMGVILDAACED 577
Query: 426 CIN 428
IN
Sbjct: 578 MIN 580
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 130/313 (41%), Gaps = 28/313 (8%)
Query: 53 LCFSALSNSGDIDYSYRAFSQL----SSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRH 108
L L G ++ Y F + S P + I+ +I GY+ S + ++ + +M+
Sbjct: 332 LVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE 391
Query: 109 GLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWA 168
G PD +TY + + E + G + +SLI G + A
Sbjct: 392 GFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEA 451
Query: 169 HKVFDSVQEKNLVS----WNSMLDGYAKCGEMVLAHKVFESMSERD-----VRSWSSLID 219
++F+ + EK +N+++D + K ++ A +F+ M E + V +++ L+
Sbjct: 452 ERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLS 511
Query: 220 GYVKAGEYREAMAVFEKM--RAVGPKANEVTMVSV-LCACAHLGALEKGKMMHKYIVDNG 276
G K EA+ +++ M + + P A +S LC + K I+D
Sbjct: 512 GMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACK-------ILDEL 564
Query: 277 LPLTLVLQTSLVDM---YAKCGAIEEALLVFHGVSKRKTDV--LIWNAMIGGLATHGSVE 331
P+ ++L + DM K G I+EA + G+++R +V I MI L G +
Sbjct: 565 APMGVILDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKAD 624
Query: 332 ESLGLFKDMQAVG 344
++ L +G
Sbjct: 625 LAMKLMHSKIGIG 637
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 161/356 (45%), Gaps = 17/356 (4%)
Query: 96 IQSLSIFLKMLRH-GLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNS 154
+ + + FLKM+ G+ P+ + Y + A R+ N + S+ + +++ G E + F +
Sbjct: 465 VDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSI 524
Query: 155 LIHMYASCGNIVWAHKVFDSVQ----EKNLVSWNSMLDGYAKCGEMVLAHKVFESMSER- 209
LI + + A V + + E N V +N++++G K G+ A ++ +++ +
Sbjct: 525 LIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEK 584
Query: 210 ----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKG 265
S++S+IDG+VK G+ A+ + +M G N VT S++ ++
Sbjct: 585 RYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLA 644
Query: 266 KMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR--KTDVLIWNAMIGG 323
M + L L L +L+D + K ++ A +F + + +V ++N++I G
Sbjct: 645 LEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISG 704
Query: 324 LATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPS 383
G ++ ++ L+K M GI D TY G + A + L G+ P
Sbjct: 705 FRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPD 764
Query: 384 SEHYACMVDVLARAGQLATAYQFICQMP---MEPTASMLGALLSGCINHRNFELAE 436
+ +V+ L++ GQ A + + +M + P + +++G +HR L E
Sbjct: 765 EILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAG--HHREGNLNE 818
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 159/348 (45%), Gaps = 17/348 (4%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P + +N ++ + KN + SIF +ML GL P+ TY L + +++ V
Sbjct: 482 PNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDV 541
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDS-VQEK----NLVSWNSMLDGYA 191
+ + E + I N++I+ G A ++ + ++EK + S+NS++DG+
Sbjct: 542 INQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFV 601
Query: 192 KCGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEV 247
K G+ A + + MSE +V +++SLI+G+ K+ A+ + +M+++ K +
Sbjct: 602 KVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLP 661
Query: 248 TMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEAL-----L 302
+++ ++ + + + GL + + SL+ + G ++ A+ +
Sbjct: 662 AYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKM 721
Query: 303 VFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHG 362
V G+S D+ + MI GL G++ + L+ ++ +GI DE+ +
Sbjct: 722 VNDGIS---CDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKK 778
Query: 363 GLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQM 410
G +A E + K +TP+ Y+ ++ R G L A++ +M
Sbjct: 779 GQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEM 826
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 84/404 (20%), Positives = 161/404 (39%), Gaps = 51/404 (12%)
Query: 64 IDYSYRAFSQLSSPRIFIW----NTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPF 119
+DY+ F + ++ + N ++ S ++ I+ KM+ G+A D +T
Sbjct: 185 MDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQL 244
Query: 120 LAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKN 179
L +AS R E V + ++ G E D + + + ++V A + ++ K
Sbjct: 245 LMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKL 304
Query: 180 LV-----SWNSMLDGYAKCGEMVLAHKVFESMS----ERDVRSWSSLIDGYVKAGEYREA 230
V ++ S++ + K G M A +V + M V + +SL++GY K E +A
Sbjct: 305 GVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKA 364
Query: 231 MAVFEKMRAVGPKANEVTMVSVLCA--CAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLV 288
+ +F +M G ++V M SV+ C ++ +EK + + + + VL +++
Sbjct: 365 LDLFNRMEEEGLAPDKV-MFSVMVEWFCKNM-EMEKAIEFYMRMKSVRIAPSSVLVHTMI 422
Query: 289 DMYAKCGAIEEALLVF---------HGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKD 339
K + E AL +F HG + N + G V+ + K
Sbjct: 423 QGCLKAESPEAALEIFNDSFESWIAHG--------FMCNKIFLLFCKQGKVDAATSFLKM 474
Query: 340 MQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQ 399
M+ GI+ + V Y + A F + + G+ P++ Y+ ++D +
Sbjct: 475 MEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKD 534
Query: 400 LATAYQFICQMPMEPTASMLGALLSGCINHRNFELAEIVGRKLI 443
A+ I QM N NFE E++ +I
Sbjct: 535 EQNAWDVINQM-----------------NASNFEANEVIYNTII 561
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 170/385 (44%), Gaps = 21/385 (5%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTY-PFL---AKASARLLNQET 132
P + NT++ G + ++ + +M+ G P+ +TY P L K+ L E
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250
Query: 133 GVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLD 188
+ IK D + +I G++ A +F+ ++ K +++++N+++
Sbjct: 251 LRKMEERNIK----LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 189 GYAKCGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKA 244
G+ G K+ M +R +V ++S LID +VK G+ REA + ++M G
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 245 NEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVF 304
N +T S++ LE+ M ++ G ++ L++ Y K I++ L +F
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 305 HGVSKRKT--DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHG 362
+S R + + +N ++ G G +E + LF++M + ++ D V+Y
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 363 GLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPMEPT---ASML 419
G +++A F ++K M Y ++ + A ++ A+ C +P++ A
Sbjct: 487 GELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAY 546
Query: 420 GALLSGCINHRNFELAEIVGRKLIE 444
++S + A+I+ RK+ E
Sbjct: 547 NIMISELCRKDSLSKADILFRKMTE 571
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 100/500 (20%), Positives = 203/500 (40%), Gaps = 61/500 (12%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P + +N + + +K L++ +M G+A T + R S
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 137 HAHIIKTGHEYDRFIQNSLIH---------------------------------MYASCG 163
I+K G+E D I N+L++ + C
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 164 N------IVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVR----S 213
N +V ++ ++ + N V++ +L+ K G+ LA ++ M ER+++
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 214 WSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIV 273
+S +IDG K G A +F +M G KA+ +T +++ + G + G + + ++
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 274 DNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR--KTDVLIWNAMIGGLATHGSVE 331
+ +V + L+D + K G + EA + + +R + + +N++I G +E
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 332 ESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMV 391
E++ + M + G D +T+ + + F + G+ ++ Y +V
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 392 DVLARAGQLATAYQFICQM---PMEPTASMLGALLSGCINHRNFELA-EIVGR-KLIELE 446
++G+L A + +M + P LL G ++ E A EI G+ + ++E
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505
Query: 447 PDHDGRYIGLSNVYAGVKRWDDARGMREAMERRGVK---KSPGFSSVEIC---GVSRRFI 500
D G Y+ + + + DDA + ++ +GVK ++ E+C +S+ I
Sbjct: 506 LDI-GIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADI 564
Query: 501 AHDKT----HSDSEETYSML 516
K H+ E TY++L
Sbjct: 565 LFRKMTEEGHAPDELTYNIL 584
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 144/339 (42%), Gaps = 10/339 (2%)
Query: 82 WNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHII 141
++ II G + + ++F +M G D +TY L + G + +I
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 142 KTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAKCGEMV 197
K + + LI + G + A ++ + ++ N +++NS++DG+ K +
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 198 LAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVL 253
A ++ + M + D+ +++ LI+GY KA + + +F +M G AN VT +++
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 254 CACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT- 312
G LE K + + +V + +V L+D G +E+AL +F + K K
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505
Query: 313 -DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHF 371
D+ I+ +I G+ V+++ LF + G+K D Y + +A
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADIL 565
Query: 372 FESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQM 410
F + + G P Y ++ TA + I +M
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEM 604
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 141/341 (41%), Gaps = 50/341 (14%)
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVS 135
SP + ++ +I + ++ + +M++ G+AP+ +TY L + E +
Sbjct: 330 SPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQ 389
Query: 136 VHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYA 191
+ +I G + D N LI+ Y I ++F + + N V++N+++ G+
Sbjct: 390 MVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFC 449
Query: 192 KCGEMVLAHKVFESMSERDVR----SWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEV 247
+ G++ +A K+F+ M R VR S+ L+DG GE +A+ +F
Sbjct: 450 QSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF------------- 496
Query: 248 TMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGA--IEEALLVFH 305
G +EK KM +D G+ + ++ + C A +++A +F
Sbjct: 497 ------------GKIEKSKME----LDIGIYMIII--------HGMCNASKVDDAWDLFC 532
Query: 306 GVSKR--KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGG 363
+ + K D +N MI L S+ ++ LF+ M G DE+TY
Sbjct: 533 SLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDD 592
Query: 364 LVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAY 404
A E + G P+ MV + +G+L ++
Sbjct: 593 DATTAAELIEEMKSSGF-PADVSTVKMVINMLSSGELDKSF 632
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 161/380 (42%), Gaps = 18/380 (4%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P +N +I G ++ + +ML G APD +TY +L ++ + +
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVF-DSVQEKNLV----SWNSMLDGYA 191
I K + I N+LIH + + G + A V D V +V ++NS++ GY
Sbjct: 345 FYRIPKP----EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYW 400
Query: 192 KCGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEV 247
K G + LA +V M + +V S++ L+DG+ K G+ EA V +M A G K N V
Sbjct: 401 KEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTV 460
Query: 248 TMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGV 307
++ A + + + + + G + SL+ + I+ AL + +
Sbjct: 461 GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520
Query: 308 SKRKT--DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLV 365
+ + +N +I G ++E+ L +M G DE+TY G V
Sbjct: 521 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580
Query: 366 KEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPME---PTASMLGAL 422
+A FE + + G PS+ +++ L R+G + A +F +M + P +L
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 640
Query: 423 LSGCINHRNFELAEIVGRKL 442
++G E + RKL
Sbjct: 641 INGLCRAGRIEDGLTMFRKL 660
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 161/373 (43%), Gaps = 13/373 (3%)
Query: 37 LITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPI 96
++ G + D+ I+ + L G +D + F ++ P I I+NT+I G+
Sbjct: 313 MLIRGFAPDD--ITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLD 370
Query: 97 QSLSIFLKMLR-HGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSL 155
+ ++ M+ +G+ PD TY L + + V + G + + + L
Sbjct: 371 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTIL 430
Query: 156 IHMYASCGNIVWAHKVFDSVQ----EKNLVSWNSMLDGYAKCGEMVLAHKVFESMSER-- 209
+ + G I A+ V + + + N V +N ++ + K + A ++F M +
Sbjct: 431 VDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC 490
Query: 210 --DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKM 267
DV +++SLI G + E + A+ + M + G AN VT +++ A G +++ +
Sbjct: 491 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARK 550
Query: 268 MHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSK--RKTDVLIWNAMIGGLA 325
+ +V G PL + SL+ + G +++A +F + + + N +I GL
Sbjct: 551 LVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLC 610
Query: 326 THGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSE 385
G VEE++ K+M G D VT+ G +++ F L G+ P +
Sbjct: 611 RSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTV 670
Query: 386 HYACMVDVLARAG 398
+ ++ L + G
Sbjct: 671 TFNTLMSWLCKGG 683
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 141/341 (41%), Gaps = 7/341 (2%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P I+ T+I S ++L + +M G PD T+ + + +
Sbjct: 250 PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKM 309
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEM 196
++ G D L++ G + A +F + + +V +N+++ G+ G +
Sbjct: 310 VNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRL 369
Query: 197 VLAHKVFESMSER-----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVS 251
A V M DV +++SLI GY K G A+ V MR G K N +
Sbjct: 370 DDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTI 429
Query: 252 VLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR- 310
++ LG +++ + + +GL V L+ + K I EA+ +F + ++
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 311 -KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAW 369
K DV +N++I GL ++ +L L +DM + G+ A+ VTY G +KEA
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 549
Query: 370 HFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQM 410
+ G Y ++ L RAG++ A +M
Sbjct: 550 KLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 121/286 (42%), Gaps = 18/286 (6%)
Query: 166 VWAHKVFDSVQEK---NLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRS----WSSLI 218
V A+ +D + K L ++ ++ + E+ A + M++ + +LI
Sbjct: 200 VAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLI 259
Query: 219 DGYVKAGEYREAMAVFEKMRAVG--PKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNG 276
K EA+ + E+M +G P A V +L C E KM+++ ++ G
Sbjct: 260 HSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV-ILGLCKFDRINEAAKMVNRMLI-RG 317
Query: 277 LPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGL 336
+ L++ K G ++ A +F+ + K +++I+N +I G THG ++++ +
Sbjct: 318 FAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP--KPEIVIFNTLIHGFVTHGRLDDAKAV 375
Query: 337 FKDM-QAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLA 395
DM + GI D TY GLV A + G P+ Y +VD
Sbjct: 376 LSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFC 435
Query: 396 RAGQLATAYQFICQMP---MEPTASMLGALLSG-CINHRNFELAEI 437
+ G++ AY + +M ++P L+S C HR E EI
Sbjct: 436 KLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/381 (20%), Positives = 166/381 (43%), Gaps = 13/381 (3%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P + N ++ G + ++ + +M+ G P+ +TY + K + + +
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAK 192
+ + + D + +I G++ A +F+ ++ K +++ + +++ G+
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 193 CGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVT 248
G K+ M +R DV ++S+LID +VK G+ REA + ++M G + VT
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354
Query: 249 MVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVS 308
S++ L+K M +V G + L++ Y K I++ L +F +S
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 309 KRKT--DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVK 366
R D + +N +I G G +E + LF++M + ++ D V+Y G +
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474
Query: 367 EAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPM---EPTASMLGALL 423
+A FE ++K M Y ++ + A ++ A+ C +P+ +P ++
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534
Query: 424 SGCINHRNFELAEIVGRKLIE 444
G + A+++ RK+ E
Sbjct: 535 GGLCKKGSLSEADLLFRKMEE 555
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 148/353 (41%), Gaps = 45/353 (12%)
Query: 55 FSALSNSGDIDYSYRAFSQLS----SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGL 110
L G +D ++ F+++ I I+ T+IRG+ + + M++ +
Sbjct: 254 IDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Query: 111 APDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHK 170
PD + + L + +H +I+ G D
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT--------------------- 352
Query: 171 VFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGE 226
V++ S++DG+ K ++ A+ + + M + ++R+++ LI+GY KA
Sbjct: 353 ----------VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 227 YREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTS 286
+ + +F KM G A+ VT +++ LG LE K + + +V + +V
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 287 LVDMYAKCGAIEEALLVFHGVSKRKT--DVLIWNAMIGGLATHGSVEESLGLFKDMQAVG 344
L+D G E+AL +F + K K D+ I+N +I G+ V+++ LF + G
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 345 IKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARA 397
+K D TY G + EA F +++ G +P+ C ++L RA
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPN----GCTYNILIRA 571
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 115/256 (44%), Gaps = 9/256 (3%)
Query: 179 NLVSWNSMLDGYAKCGEMVLAH----KVFESMSERDVRSWSSLIDGYVKAGEYREAMAVF 234
NL + + M++ +C ++ LA K+ + E D ++S+LI+G G EA+ +
Sbjct: 106 NLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELV 165
Query: 235 EKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKC 294
++M +G K +T+ +++ G + ++ +V+ G V ++ + K
Sbjct: 166 DRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS 225
Query: 295 GAIEEALLVFHGVSKRKT--DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
G A+ + + +RK D + ++ +I GL GS++ + LF +M+ G KAD + Y
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIY 285
Query: 353 XXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQF---ICQ 409
+ G + + K +TP ++ ++D + G+L A + + Q
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 410 MPMEPTASMLGALLSG 425
+ P +L+ G
Sbjct: 346 RGISPDTVTYTSLIDG 361
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 177/381 (46%), Gaps = 21/381 (5%)
Query: 61 SGDIDYSYRAFSQLS----SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLT 116
+G+I+ S+ +L+ SP + I+ T+I G ++ +F +M + GL + T
Sbjct: 176 AGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERT 235
Query: 117 YPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQ 176
Y L + ++ G ++ + + G + + N +++ G A +VFD ++
Sbjct: 236 YTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR 295
Query: 177 EK----NLVSWNSMLDGYAKCGEMVL--AHKVFESMSERDVR----SWSSLIDGYVKAGE 226
E+ N+V++N+++ G C EM L A+KV + M + ++++LIDG+ G+
Sbjct: 296 ERGVSCNIVTYNTLIGGL--CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353
Query: 227 YREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTS 286
+A+++ +++ G + VT ++ G M K + + G+ + V T
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413
Query: 287 LVDMYAKCGAIEEALLVFHGVSKRK--TDVLIWNAMIGGLATHGSVEESLGLFKDMQAVG 344
L+D +A+ +E+A+ + + + DV ++ +I G G + E+ LFK M
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473
Query: 345 IKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAY 404
+ +EV Y G A + +++ + P+ Y M++VL + + A
Sbjct: 474 CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533
Query: 405 QFICQM---PMEPTASMLGAL 422
+ + +M ++P+ S+L +
Sbjct: 534 RLVEKMIDSGIDPSTSILSLI 554
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 157/388 (40%), Gaps = 43/388 (11%)
Query: 68 YRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAK--ASA 125
Y S+ S + ++ II Y S++ S+S F +M+ +G P + +L +
Sbjct: 83 YLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGS 142
Query: 126 RLLNQ------ETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQE-- 177
NQ E V + G LI G I K FD + E
Sbjct: 143 SSFNQWWSFFNENKSKVVLDVYSFG---------ILIKGCCEAGEI---EKSFDLLIELT 190
Query: 178 -----KNLVSWNSMLDGYAKCGEMVLAHKVFESMSE----RDVRSWSSLIDGYVKAGEYR 228
N+V + +++DG K GE+ A +F M + + R+++ LI+G K G +
Sbjct: 191 EFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKK 250
Query: 229 EAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLV 288
+ ++EKM+ G N T V+ G + + + + G+ +V +L+
Sbjct: 251 QGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLI 310
Query: 289 DMYAKCGAIEEALLVFHGVSKRKTD-----VLIWNAMIGGLATHGSVEESLGLFKDMQAV 343
+ + EA V V + K+D ++ +N +I G G + ++L L +D+++
Sbjct: 311 GGLCREMKLNEANKV---VDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSR 367
Query: 344 GIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATA 403
G+ VTY G A + +++ G+ PS Y ++D AR+ + A
Sbjct: 368 GLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKA 427
Query: 404 YQFICQMP---MEPTASMLGALLSG-CI 427
Q M + P L+ G CI
Sbjct: 428 IQLRLSMEELGLVPDVHTYSVLIHGFCI 455
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 10/186 (5%)
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVS 135
SP + +N ++ G+ + + + +M G+ P +TY L AR N E +
Sbjct: 370 SPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ 429
Query: 136 VHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNL----VSWNSMLDGYA 191
+ + + G D + LIH + G + A ++F S+ EKN V +N+M+ GY
Sbjct: 430 LRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYC 489
Query: 192 KCGEMVLAHKVFESMSERD----VRSWSSLIDGYVKAGEYREAMAVFEKM--RAVGPKAN 245
K G A K+ + M E++ V S+ +I+ K + +EA + EKM + P +
Sbjct: 490 KEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTS 549
Query: 246 EVTMVS 251
++++S
Sbjct: 550 ILSLIS 555
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 167/356 (46%), Gaps = 15/356 (4%)
Query: 85 IIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTG 144
++ G P ++ SIF ++ G P +TY L A R + + +S+ + + K G
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 145 HEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAKCGEMVLAH 200
+ D + N++I+ + GN+ A K+F+ ++E ++N+++ GY K G++ +
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
Query: 201 KVF-----ESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCA 255
++ + M + + R+ + L+ + + EA + KM++ G K + VT ++ A
Sbjct: 445 RLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKA 504
Query: 256 CAHLGALEKGK-MMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT-- 312
A +G+ + M+ ++ N + + ++V+ Y + G +EEAL F+ + +
Sbjct: 505 YARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHP 564
Query: 313 DVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFF 372
++ ++N++I G ++ + M+ G+K D VT+ G +K +
Sbjct: 565 NLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIY 624
Query: 373 ESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMP---MEPTASMLGALLSG 425
+ + G+ P ++ + ARAG+ A Q + QM + P + ++SG
Sbjct: 625 TDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISG 680
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 163/384 (42%), Gaps = 79/384 (20%)
Query: 16 TLLSLLDGCKSMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLS 75
TL++ L K L L + + +GL D + ++ +A S SG++D + + F ++
Sbjct: 359 TLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAII--NASSESGNLDQAMKIFEKMK 416
Query: 76 S----PRIFIWNTIIRGYS------------------------------------NSKNP 95
P +NT+I+GY N +
Sbjct: 417 ESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKI 476
Query: 96 IQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSL 155
++ +I KM +G+ PD +T+ LAKA AR+ + + II R + N +
Sbjct: 477 EEAWNIVYKMQSYGVKPDVVTFNTLAKAYARI---GSTCTAEDMIIP------RMLHNKV 527
Query: 156 IHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVRS-- 213
+CG IV +GY + G+M A + F M E V
Sbjct: 528 KPNVRTCGTIV---------------------NGYCEEGKMEEALRFFYRMKELGVHPNL 566
Query: 214 --WSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKY 271
++SLI G++ + V + M G K + VT +++ A + +G +++ + ++
Sbjct: 567 FVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTD 626
Query: 272 IVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSK--RKTDVLIWNAMIGGLATHGS 329
+++ G+ + + L YA+ G E+A + + + K + +V+I+ +I G + G
Sbjct: 627 MLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGE 686
Query: 330 VEESLGLFKDMQA-VGIKADEVTY 352
+++++ ++K M VG+ + TY
Sbjct: 687 MKKAMQVYKKMCGIVGLSPNLTTY 710
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/414 (20%), Positives = 173/414 (41%), Gaps = 47/414 (11%)
Query: 79 IFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHA 138
I +NT++ + + ++++ML + P+ TY + +L N E +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 139 HIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQ----EKNLVSWNSMLDGYAKCG 194
I++ G + D F SLI Y ++ A KVF+ + +N V++ ++ G
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 195 EMVLAHKVFESMSERD----VRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMV 250
+ A +F M + + VR+++ LI + EA+ + ++M G K N T
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 251 SVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR 310
++ + EK + + +++ GL ++ +L++ Y K G IE+A+ V + R
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 311 K------------------------------------TDVLIWNAMIGGLATHGSVEESL 334
K DV+ +N++I G G+ + +
Sbjct: 423 KLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 335 GLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVL 394
L M G+ D+ TY V+EA F+SL++ G+ P+ Y ++D
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 395 ARAGQLATAYQFICQMPME---PTASMLGALLSGCINHRNFELAEIVGRKLIEL 445
+AG++ A+ + +M + P + AL+ G + A ++ K++++
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 135/325 (41%), Gaps = 11/325 (3%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P + +N +I GY ++ + M L+P+ TY L K + N + V
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGV 449
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLV----SWNSMLDGYAK 192
+++ D NSLI GN A+++ + ++ LV ++ SM+D K
Sbjct: 450 LNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK 509
Query: 193 CGEMVLAHKVFESMSERDVRS----WSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVT 248
+ A +F+S+ ++ V +++LIDGY KAG+ EA + EKM + N +T
Sbjct: 510 SKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLT 569
Query: 249 MVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGV- 307
+++ G L++ ++ + +V GL T+ T L+ K G + A F +
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629
Query: 308 -SKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVK 366
S K D + I G + ++ + M+ G+ D TY G
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTN 689
Query: 367 EAWHFFESLDKCGMTPSSEHYACMV 391
A+ + + G PS + ++
Sbjct: 690 FAFDVLKRMRDTGCEPSQHTFLSLI 714
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 134/337 (39%), Gaps = 29/337 (8%)
Query: 26 SMLELKQLHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQL----SSPRIFI 81
++LE K + I + +S D I ++L GD D++Y F Q+ + P
Sbjct: 587 TLLEEKMV-KIGLQPTVSTDTILIHRLL------KDGDFDHAYSRFQQMLSSGTKPDAHT 639
Query: 82 WNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHII 141
+ T I+ Y + + + KM +G++PD TY L K L V +
Sbjct: 640 YTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMR 699
Query: 142 KTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSML--DGYAKCGEMVLA 199
TG E + SLI +++ E L + ++M+ D + E ++
Sbjct: 700 DTGCEPSQHTFLSLIK------HLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVE 753
Query: 200 HKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKM-RAVGPKANEVTMVSVLCACAH 258
H V + +S+ LI G + G R A VF+ M R G +E+ ++L C
Sbjct: 754 HSV-----TPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCK 808
Query: 259 LGA-LEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSK--RKTDVL 315
L E K++ I LP + + +Y K G E VF + + D L
Sbjct: 809 LKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKK-GEKERGTSVFQNLLQCGYYEDEL 867
Query: 316 IWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
W +I G+ G VE LF M+ G K TY
Sbjct: 868 AWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTY 904
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/391 (20%), Positives = 175/391 (44%), Gaps = 23/391 (5%)
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVS 135
+P + +NT+I G +++ ++ KM+ GL D +TY + ++ + ++ ++
Sbjct: 223 TPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALN 282
Query: 136 VHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYA 191
+ + + +T + D I +++I G+ A +F + EK N+ ++N M+DG+
Sbjct: 283 LLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFC 342
Query: 192 KCGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKM--RAVGPKAN 245
G A ++ M ER DV ++++LI VK G+ EA + ++M R + P +
Sbjct: 343 SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP--D 400
Query: 246 EVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFH 305
VT S++ + K M + P + T ++D+Y + ++E + +
Sbjct: 401 TVTYNSMIYGFCKHNRFDDAKHMFDLMAS---PDVVTFNT-IIDVYCRAKRVDEGMQLLR 456
Query: 306 GVSKRK--TDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGG 363
+S+R + +N +I G ++ + LF++M + G+ D +T
Sbjct: 457 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 516
Query: 364 LVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPM---EPTASMLG 420
++EA FE + + + Y ++ + + ++ A+ C +P+ EP
Sbjct: 517 KLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYN 576
Query: 421 ALLSGCINHRNFELAEIVGRKLIE--LEPDH 449
++SG A ++ K+ + EPD+
Sbjct: 577 VMISGFCGKSAISDANVLFHKMKDNGHEPDN 607
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 147/340 (43%), Gaps = 6/340 (1%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P + I++ II + + +F +ML G+AP+ TY + +
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAK 192
+I+ D N+LI G + A K+ D + + + V++NSM+ G+ K
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
A +F+ M+ DV +++++ID Y +A E M + ++ G AN T ++
Sbjct: 414 HNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGV--SKR 310
+ + L + + + ++ +G+ + L+ + + +EEAL +F + SK
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533
Query: 311 KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWH 370
D + +N +I G+ V+E+ LF + G++ D TY + +A
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 593
Query: 371 FFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQM 410
F + G P + Y ++ +AG++ + + I +M
Sbjct: 594 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/383 (19%), Positives = 155/383 (40%), Gaps = 41/383 (10%)
Query: 42 LSQDEPFISKVLCFSALS-----NSGDIDYS-YRAFSQLSSP-RIFIWNTIIRGYSNSKN 94
+ + PF + V C + N D+ S YR P I+ +N +I+ + +
Sbjct: 97 MVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHK 156
Query: 95 PIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNS 154
SLS F K+ + G PD +T+ L +++ ++++TG
Sbjct: 157 LSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG---------- 206
Query: 155 LIHMYASCGNIVWAHKVFDSVQEKNL----VSWNSMLDGYAKCGEMVLAHKVFESMSER- 209
+ A +FD + E L +++N++++G G ++ A + M +
Sbjct: 207 ----------FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 210 ---DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGK 266
DV ++ ++++G K G+ + A+ + KM K + V +++ G +
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 267 MMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT--DVLIWNAMIGGL 324
+ +++ G+ + ++D + G +A + + +R+ DVL +NA+I
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISAS 376
Query: 325 ATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSS 384
G + E+ L +M I D VTY +A H F+ + +P
Sbjct: 377 VKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDV 432
Query: 385 EHYACMVDVLARAGQLATAYQFI 407
+ ++DV RA ++ Q +
Sbjct: 433 VTFNTIIDVYCRAKRVDEGMQLL 455
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 147/340 (43%), Gaps = 32/340 (9%)
Query: 153 NSLIHMYASCGNIVWAHKVFDSVQ----EKNLVSWNSMLDGYAKCGEMVLAHKVFESMSE 208
N LI + C + ++ F + + ++V++N++L G + L ++ E+++
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHG------LCLEDRISEALA- 197
Query: 209 RDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCA-CAHLGALEKGKM 267
+ GY+ + EA+A+F++M +G +T +++ C LE +
Sbjct: 198 ---------LFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAAL 248
Query: 268 MHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR--KTDVLIWNAMIGGLA 325
++K +V GL + +V ++V+ K G + AL + + + K DV+I++A+I L
Sbjct: 249 VNK-MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307
Query: 326 THGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSE 385
G ++ LF +M GI + TY G +A + + + P
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367
Query: 386 HYACMVDVLARAGQLATAYQFICQM---PMEPTASMLGALLSGCINHRNFELAEIVGRKL 442
+ ++ + G+L A + +M + P +++ G H F+ A + +
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHM 423
Query: 443 IELEPDHD-GRYIGLSNVYAGVKRWDDARGMREAMERRGV 481
+L D + + +VY KR D+ + + RRG+
Sbjct: 424 FDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 99/221 (44%), Gaps = 8/221 (3%)
Query: 65 DYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKAS 124
D + F ++SP + +NTII Y +K + + + ++ R GL + TY L
Sbjct: 418 DDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 477
Query: 125 ARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQ----EKNL 180
+ N + +I G D N L++ + + A ++F+ +Q + +
Sbjct: 478 CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDT 537
Query: 181 VSWNSMLDGYAKCGEMVLAHKVFESMS----ERDVRSWSSLIDGYVKAGEYREAMAVFEK 236
V++N ++ G K ++ A +F S+ E DV++++ +I G+ +A +F K
Sbjct: 538 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 597
Query: 237 MRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGL 277
M+ G + + T +++ C G ++K + + NG
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 82 WNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHII 141
+NT+I G+ N + +F +M+ HG+ PD +T L E + + I
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 529
Query: 142 KTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQ----EKNLVSWNSMLDGYAKCGEM- 196
+ + D N +IH + A +F S+ E ++ ++N M+ G+ CG+
Sbjct: 530 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF--CGKSA 587
Query: 197 -----VLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTM 249
VL HK+ ++ E D ++++LI G +KAGE +++ + +MR+ G + T+
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 645
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 167/362 (46%), Gaps = 13/362 (3%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P + +N +I + +S + KM + G AP +TY + + + + +
Sbjct: 231 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 290
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAK 192
H+ G + D N LIH I + + ++++ N V++N++++G++
Sbjct: 291 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSN 350
Query: 193 CGEMVLAHKVFESMSERDVR----SWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVT 248
G++++A ++ M + ++++LIDG++ G ++EA+ +F M A G +EV+
Sbjct: 351 EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 410
Query: 249 MVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVS 308
+L + + + + NG+ + + T ++D K G ++EA+++ + +S
Sbjct: 411 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 470
Query: 309 KR--KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVK 366
K D++ ++A+I G G + + + + VG+ + + Y G +K
Sbjct: 471 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 530
Query: 367 EAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPME---PTASMLGALL 423
EA +E++ G T + +V L +AG++A A +F+ M + P L+
Sbjct: 531 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 590
Query: 424 SG 425
+G
Sbjct: 591 NG 592
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 134/300 (44%), Gaps = 28/300 (9%)
Query: 72 SQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQE 131
+Q P + +N ++ GYS K+ S ++ ++ +G+ PD LT L E
Sbjct: 787 NQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLE 846
Query: 132 TGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLVSWNSMLDGYA 191
G+ + I G E DR+ N LI + G I WA FD V K + S LD
Sbjct: 847 IGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWA---FDLV--KVMTSLGISLDK-D 900
Query: 192 KCGEMVLA----HKVFES------MSERDV----RSWSSLIDGYVKAGEYREAMAVFEKM 237
C MV H+ ES MS++ + R + LI+G + G+ + A V E+M
Sbjct: 901 TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 960
Query: 238 RA---VGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKC 294
A P E MV L C G ++ ++ ++++ L T+ T+L+ + K
Sbjct: 961 IAHKICPPNVAESAMVRALAKC---GKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKN 1017
Query: 295 GAIEEA--LLVFHGVSKRKTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTY 352
G + EA L V K D++ +N +I GL G + + L+++M+ G A+ TY
Sbjct: 1018 GNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTY 1077
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/458 (19%), Positives = 196/458 (42%), Gaps = 23/458 (5%)
Query: 7 SFKIANLNQTLLSLLDGCKSMLELKQ---LHAILITSGLSQDEPFISKVLCFSALSNSGD 63
SF ++ + T +L+DG S K+ + ++ GL+ E +S + L + +
Sbjct: 366 SFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSE--VSYGVLLDGLCKNAE 423
Query: 64 IDYSYRAFSQLSSPRIFI----WNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPF 119
D + + ++ + + + +I G + +++ + +M + G+ PD +TY
Sbjct: 424 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSA 483
Query: 120 LAKASARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSV---- 175
L ++ +T + I + G + I ++LI+ G + A ++++++
Sbjct: 484 LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 543
Query: 176 QEKNLVSWNSMLDGYAKCGEMVLAHKVFESMSERDVR----SWSSLIDGYVKAGEYREAM 231
++ ++N ++ K G++ A + M+ + S+ LI+GY +GE +A
Sbjct: 544 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAF 603
Query: 232 AVFEKMRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMY 291
+VF++M VG T S+L G L + + K + + V+ +L+
Sbjct: 604 SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 663
Query: 292 AKCGAIEEALLVFHGVSKRKT--DVLIWNAMIGGLATHGSVEESLGLFKDMQAVG-IKAD 348
K G + +A+ +F + +R D + ++I GL G ++ K+ +A G + +
Sbjct: 664 CKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 723
Query: 349 EVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFIC 408
+V Y G K +F E +D G TP M+D +R G++ +
Sbjct: 724 KVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLP 783
Query: 409 QMPME---PTASMLGALLSGCINHRNFELAEIVGRKLI 443
+M + P + LL G ++ + ++ R +I
Sbjct: 784 EMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSII 821
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/444 (21%), Positives = 185/444 (41%), Gaps = 65/444 (14%)
Query: 19 SLLDGCKSMLELKQ---LHAILITSGLSQDEPFISKVLCFSALSNSGDIDYSYRAFSQLS 75
+L+ C M LK+ ++ +I G ++D F VL ++L +G + + ++
Sbjct: 518 TLIYNCCRMGCLKEAIRIYEAMILEGHTRDH-FTFNVL-VTSLCKAGKVAEAEEFMRCMT 575
Query: 76 S----PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASAR---LL 128
S P ++ +I GY NS +++ S+F +M + G P + TY L K + L
Sbjct: 576 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 635
Query: 129 NQETGV-SVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNLV----SW 183
E + S+HA D + N+L+ GN+ A +F + +++++ ++
Sbjct: 636 EAEKFLKSLHA----VPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 691
Query: 184 NSMLDGYAKCGEMVLAHKVFESMSER-----DVRSWSSLIDGYVKAGEYREAMAVFEKMR 238
S++ G + G+ V+A + R + ++ +DG KAG+++ + E+M
Sbjct: 692 TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 751
Query: 239 AVGPKANEVTMVSVLCACAHLGALEKGK-------------------------------- 266
+G + VT +++ + +G +EK
Sbjct: 752 NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVS 811
Query: 267 ---MMHKYIVDNG-LPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR--KTDVLIWNAM 320
++++ I+ NG LP L SLV + +E L + R + D +N +
Sbjct: 812 TSFLLYRSIILNGILPDKLTCH-SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNML 870
Query: 321 IGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGM 380
I +G + + L K M ++GI D+ T +E+ + K G+
Sbjct: 871 ISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGI 930
Query: 381 TPSSEHYACMVDVLARAGQLATAY 404
+P S Y +++ L R G + TA+
Sbjct: 931 SPESRKYIGLINGLCRVGDIKTAF 954
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/391 (20%), Positives = 175/391 (44%), Gaps = 23/391 (5%)
Query: 76 SPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVS 135
+P + +NT+I G +++ ++ KM+ GL D +TY + ++ + ++ ++
Sbjct: 223 TPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALN 282
Query: 136 VHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYA 191
+ + + +T + D I +++I G+ A +F + EK N+ ++N M+DG+
Sbjct: 283 LLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFC 342
Query: 192 KCGEMVLAHKVFESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKM--RAVGPKAN 245
G A ++ M ER DV ++++LI VK G+ EA + ++M R + P +
Sbjct: 343 SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP--D 400
Query: 246 EVTMVSVLCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFH 305
VT S++ + K M + P + T ++D+Y + ++E + +
Sbjct: 401 TVTYNSMIYGFCKHNRFDDAKHMFDLMAS---PDVVTFNT-IIDVYCRAKRVDEGMQLLR 456
Query: 306 GVSKRK--TDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGG 363
+S+R + +N +I G ++ + LF++M + G+ D +T
Sbjct: 457 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 516
Query: 364 LVKEAWHFFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQMPM---EPTASMLG 420
++EA FE + + + Y ++ + + ++ A+ C +P+ EP
Sbjct: 517 KLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYN 576
Query: 421 ALLSGCINHRNFELAEIVGRKLIE--LEPDH 449
++SG A ++ K+ + EPD+
Sbjct: 577 VMISGFCGKSAISDANVLFHKMKDNGHEPDN 607
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 147/340 (43%), Gaps = 6/340 (1%)
Query: 77 PRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSV 136
P + I++ II + + +F +ML G+AP+ TY + +
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 137 HAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQEK----NLVSWNSMLDGYAK 192
+I+ D N+LI G + A K+ D + + + V++NSM+ G+ K
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 193 CGEMVLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
A +F+ M+ DV +++++ID Y +A E M + ++ G AN T ++
Sbjct: 414 HNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 253 LCACAHLGALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGV--SKR 310
+ + L + + + ++ +G+ + L+ + + +EEAL +F + SK
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533
Query: 311 KTDVLIWNAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWH 370
D + +N +I G+ V+E+ LF + G++ D TY + +A
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 593
Query: 371 FFESLDKCGMTPSSEHYACMVDVLARAGQLATAYQFICQM 410
F + G P + Y ++ +AG++ + + I +M
Sbjct: 594 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/390 (20%), Positives = 159/390 (40%), Gaps = 41/390 (10%)
Query: 35 AILITSGLSQDEPFISKVLCFSALS-----NSGDIDYS-YRAFSQLSSP-RIFIWNTIIR 87
AI + + PF + V C + N D+ S YR P I+ +N +I+
Sbjct: 90 AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIK 149
Query: 88 GYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHIIKTGHEY 147
+ + SLS F K+ + G PD +T+ L +++ ++++TG
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG--- 206
Query: 148 DRFIQNSLIHMYASCGNIVWAHKVFDSVQEKNL----VSWNSMLDGYAKCGEMVLAHKVF 203
F++ A +FD + E L +++N++++G G ++ A +
Sbjct: 207 --FLE---------------AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALV 249
Query: 204 ESMSER----DVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCACAHL 259
M + DV ++ ++++G K G+ + A+ + KM K + V +++
Sbjct: 250 NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKD 309
Query: 260 GALEKGKMMHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKRKT--DVLIW 317
G + + +++ G+ + ++D + G +A + + +R+ DVL +
Sbjct: 310 GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF 369
Query: 318 NAMIGGLATHGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDK 377
NA+I G + E+ L +M I D VTY +A H F+ +
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM-- 427
Query: 378 CGMTPSSEHYACMVDVLARAGQLATAYQFI 407
+P + ++DV RA ++ Q +
Sbjct: 428 --ASPDVVTFNTIIDVYCRAKRVDEGMQLL 455
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 147/340 (43%), Gaps = 32/340 (9%)
Query: 153 NSLIHMYASCGNIVWAHKVFDSVQ----EKNLVSWNSMLDGYAKCGEMVLAHKVFESMSE 208
N LI + C + ++ F + + ++V++N++L G + L ++ E+++
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHG------LCLEDRISEALA- 197
Query: 209 RDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLCA-CAHLGALEKGKM 267
+ GY+ + EA+A+F++M +G +T +++ C LE +
Sbjct: 198 ---------LFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAAL 248
Query: 268 MHKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLVFHGVSKR--KTDVLIWNAMIGGLA 325
++K +V GL + +V ++V+ K G + AL + + + K DV+I++A+I L
Sbjct: 249 VNK-MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307
Query: 326 THGSVEESLGLFKDMQAVGIKADEVTYXXXXXXXXHGGLVKEAWHFFESLDKCGMTPSSE 385
G ++ LF +M GI + TY G +A + + + P
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367
Query: 386 HYACMVDVLARAGQLATAYQFICQM---PMEPTASMLGALLSGCINHRNFELAEIVGRKL 442
+ ++ + G+L A + +M + P +++ G H F+ A + +
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHM 423
Query: 443 IELEPDHD-GRYIGLSNVYAGVKRWDDARGMREAMERRGV 481
+L D + + +VY KR D+ + + RRG+
Sbjct: 424 FDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 99/221 (44%), Gaps = 8/221 (3%)
Query: 65 DYSYRAFSQLSSPRIFIWNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKAS 124
D + F ++SP + +NTII Y +K + + + ++ R GL + TY L
Sbjct: 418 DDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 477
Query: 125 ARLLNQETGVSVHAHIIKTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQ----EKNL 180
+ N + +I G D N L++ + + A ++F+ +Q + +
Sbjct: 478 CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDT 537
Query: 181 VSWNSMLDGYAKCGEMVLAHKVFESMS----ERDVRSWSSLIDGYVKAGEYREAMAVFEK 236
V++N ++ G K ++ A +F S+ E DV++++ +I G+ +A +F K
Sbjct: 538 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 597
Query: 237 MRAVGPKANEVTMVSVLCACAHLGALEKGKMMHKYIVDNGL 277
M+ G + + T +++ C G ++K + + NG
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 82 WNTIIRGYSNSKNPIQSLSIFLKMLRHGLAPDYLTYPFLAKASARLLNQETGVSVHAHII 141
+NT+I G+ N + +F +M+ HG+ PD +T L E + + I
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 529
Query: 142 KTGHEYDRFIQNSLIHMYASCGNIVWAHKVFDSVQ----EKNLVSWNSMLDGYAKCGEM- 196
+ + D N +IH + A +F S+ E ++ ++N M+ G+ CG+
Sbjct: 530 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF--CGKSA 587
Query: 197 -----VLAHKVFESMSERDVRSWSSLIDGYVKAGEYREAMAVFEKMRAVGPKANEVTM 249
VL HK+ ++ E D ++++LI G +KAGE +++ + +MR+ G + T+
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 645