Miyakogusa Predicted Gene
- Lj5g3v2242470.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2242470.1 Non Chatacterized Hit- tr|K4A5H6|K4A5H6_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si034130,25.93,8e-19,PPR,Pentatricopeptide repeat;
PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN,NULL; FAMILY NOT
NAM,CUFF.57027.1
(304 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 396 e-111
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 270 1e-72
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 267 7e-72
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 1e-70
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 262 2e-70
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 7e-68
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 1e-67
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 250 7e-67
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 1e-66
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 3e-66
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 4e-66
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 6e-66
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 9e-66
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 1e-65
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 246 1e-65
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 2e-65
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 245 2e-65
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 1e-64
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 4e-64
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 5e-64
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 5e-64
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 1e-63
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 1e-63
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 239 2e-63
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 3e-63
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 3e-63
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 7e-63
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 237 9e-63
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 1e-62
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 3e-62
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 4e-62
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 2e-61
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 2e-61
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 3e-61
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 4e-61
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 4e-61
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 231 4e-61
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 1e-60
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 1e-60
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 2e-60
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 2e-60
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 229 3e-60
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 3e-60
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 5e-60
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 228 5e-60
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 6e-60
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 1e-59
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 226 2e-59
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 3e-59
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 4e-59
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 4e-59
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 4e-59
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 224 5e-59
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 7e-59
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 7e-59
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 8e-59
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 8e-59
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 223 1e-58
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 223 1e-58
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 1e-58
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 223 1e-58
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 1e-58
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 2e-58
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 2e-58
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 222 2e-58
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 3e-58
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 221 3e-58
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 221 4e-58
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 221 5e-58
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 221 5e-58
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 5e-58
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 7e-58
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 221 7e-58
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 7e-58
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 2e-57
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 2e-57
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 219 2e-57
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 2e-57
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 2e-57
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 3e-57
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 218 4e-57
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 218 5e-57
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 6e-57
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 217 6e-57
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 217 6e-57
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 7e-57
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 8e-57
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 217 9e-57
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 2e-56
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 215 3e-56
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 6e-56
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 9e-56
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 1e-55
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 1e-55
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 213 1e-55
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 1e-55
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 212 2e-55
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 2e-55
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 3e-55
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 212 3e-55
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 3e-55
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 3e-55
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 3e-55
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 211 4e-55
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 211 4e-55
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 210 8e-55
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 9e-55
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 2e-54
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 2e-54
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 2e-54
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 2e-54
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 2e-54
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 3e-54
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 3e-54
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 3e-54
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 3e-54
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 5e-54
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 9e-54
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 2e-53
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 206 2e-53
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 2e-53
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 2e-53
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 206 2e-53
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 2e-53
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 2e-53
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 3e-53
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 3e-53
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 5e-53
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 6e-53
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 7e-53
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 203 1e-52
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 203 1e-52
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 1e-52
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 2e-52
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 2e-52
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 2e-52
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 2e-52
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 3e-52
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 202 3e-52
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 201 5e-52
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 200 9e-52
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 200 9e-52
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 1e-51
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 199 2e-51
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 3e-51
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 3e-51
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 4e-51
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 4e-51
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 4e-51
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 6e-51
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 6e-51
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 1e-50
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 1e-50
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 196 2e-50
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 4e-50
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 4e-50
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 5e-50
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 6e-50
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 7e-50
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 7e-50
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 193 1e-49
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 1e-49
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 192 3e-49
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 4e-49
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 7e-49
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 190 8e-49
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 9e-49
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 2e-48
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 3e-48
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 2e-47
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 5e-47
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 7e-47
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 182 2e-46
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 4e-45
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 6e-45
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 177 1e-44
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 177 1e-44
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 176 2e-44
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 2e-44
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 176 2e-44
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 2e-43
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 170 1e-42
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 1e-42
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 1e-42
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 4e-42
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 8e-42
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 5e-40
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 6e-40
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 2e-36
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 149 3e-36
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 4e-34
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 9e-34
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 137 8e-33
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 3e-31
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 4e-26
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 1e-24
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 2e-24
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 6e-23
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 3e-20
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 5e-19
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 5e-19
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 92 5e-19
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 3e-18
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 3e-18
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 87 2e-17
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 86 4e-17
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 6e-17
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 1e-16
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 1e-16
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 2e-16
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 82 3e-16
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 6e-16
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 7e-16
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 9e-16
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 9e-16
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 1e-15
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 2e-15
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 80 2e-15
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 80 2e-15
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 79 3e-15
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 3e-15
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 4e-15
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 6e-15
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 6e-15
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 8e-15
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 9e-15
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 78 9e-15
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 77 2e-14
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 77 2e-14
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 4e-14
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 4e-14
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 4e-14
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 5e-14
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 5e-14
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 6e-14
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 6e-14
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 7e-14
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 9e-14
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 1e-13
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 2e-13
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 73 3e-13
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 3e-13
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 3e-13
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 3e-13
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 72 4e-13
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 4e-13
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 4e-13
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 8e-13
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 8e-13
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 1e-12
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 1e-12
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 1e-12
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 2e-12
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 2e-12
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 3e-12
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 4e-12
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 69 4e-12
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 68 6e-12
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 67 1e-11
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 67 1e-11
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 2e-11
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 65 5e-11
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 5e-11
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 5e-11
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 65 8e-11
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 64 9e-11
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 1e-10
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 64 1e-10
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 64 2e-10
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 9e-10
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 61 9e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 60 1e-09
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 60 2e-09
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 60 2e-09
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 60 2e-09
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 6e-09
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 7e-09
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 56 3e-08
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 3e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 3e-08
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 9e-08
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 1e-07
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 52 6e-07
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 7e-06
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 396 bits (1018), Expect = e-111, Method: Compositional matrix adjust.
Identities = 184/307 (59%), Positives = 239/307 (77%), Gaps = 3/307 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC +L +++F SK T PW+A+++G + N L +A+ LFK+M EDV+P+ AT
Sbjct: 363 MYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIAT 422
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
NSLLPAYA LADL+QAMNIHCYL ++GF+ L+ A+ LV +YSKCG+L AH IFN I
Sbjct: 423 LNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQ 482
Query: 121 LK--DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
K KD+++W A+I+ YG HG G A+ +F EMV+SGV PN++TFTS L+ACSH GLV+
Sbjct: 483 EKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVE 542
Query: 179 EGLSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
EGL+LF+FML+H+ + +HYTCI+DLLGRAGRLD+AYNLI T+P +P VWGALL A
Sbjct: 543 EGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAA 602
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
CV+HENV+LGE+AA FELEPENTGNY+LLAN+YAA+GRW+D+EKVR M+ VGLRK P
Sbjct: 603 CVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKP 662
Query: 298 AQSLVEV 304
S +E+
Sbjct: 663 GHSTIEI 669
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 138/296 (46%), Gaps = 8/296 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY ++ +F + WN ++SG+ N +A+ +F M+ E V D+AT
Sbjct: 161 MYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHAT 220
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+LP L DL+ N+H + ++EV + LV++Y KCG + A +F+
Sbjct: 221 IVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFD--R 278
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++ +D+I W+ +I Y + G E A+ L M GV+PN VT S++ C V++G
Sbjct: 279 MERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDG 338
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
L + ++ + + T +I + + R+D + + K + W A++ CV
Sbjct: 339 KCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGAS-KYHTGPWSAIIAGCVQ 397
Query: 241 HENVE--LGEVAARWTFELEPE-NTGNYILLANLYAAVGRWRDVEKVRDMVNEVGL 293
+E V LG ++EP T N +L A YAA+ R + + + G
Sbjct: 398 NELVSDALGLFKRMRREDVEPNIATLNSLLPA--YAALADLRQAMNIHCYLTKTGF 451
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 142/286 (49%), Gaps = 16/286 (5%)
Query: 7 CGNLSY--KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQ--PDNATFN 62
CG+++Y K+F + + +N V+ ++ L +AI +F +M+ E V+ PD T+
Sbjct: 62 CGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYP 121
Query: 63 SLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK 122
+ A L +K + +H ++RS F V + L+ +Y G + A +F++ +K
Sbjct: 122 FVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDV--MK 179
Query: 123 DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLS 182
++D+I W+ +I+ Y ++G+ A+ +F+ MV V + T S+L C H+ ++ G +
Sbjct: 180 NRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRN 239
Query: 183 LFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHE 242
+ + + + + ++ ++++ + GR+D+A + M + + W ++
Sbjct: 240 VHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME-RRDVITWTCMINGYTEDG 298
Query: 243 NVELG-EVAARWTFE-LEPENTGNYILLANLYAAVGRWRDVEKVRD 286
+VE E+ FE + P N + +A+L + G D KV D
Sbjct: 299 DVENALELCRLMQFEGVRP----NAVTIASLVSVCG---DALKVND 337
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 5/131 (3%)
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ SLL +A + + +HC++I G + + S L Y+ CG + YA +F +P
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVITGGRVSG-HILSTLSVTYALCGHITYARKLFEEMP 76
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVK--PNQVTFTSVLHACSHVGLVD 178
++ ++ +I Y + G A+S+F MV GVK P+ T+ V A + +
Sbjct: 77 --QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMK 134
Query: 179 EGLSLFQFMLK 189
GL + +L+
Sbjct: 135 LGLVVHGRILR 145
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 270 bits (689), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 133/307 (43%), Positives = 190/307 (61%), Gaps = 6/307 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNA 59
MYAKC + +F + K WN ++ G+ N A EA+ LF +L E PD
Sbjct: 441 MYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDER 500
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T +LPA A L+ + IH Y++R+G+ VA+ LVD+Y+KCG+L AH +F+ I
Sbjct: 501 TVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI 560
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
KD++ W+ +IA YG HG G+ A++LFN+M Q+G++ ++++F S+L+ACSH GLVDE
Sbjct: 561 A--SKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDE 618
Query: 180 GLSLFQFMLKHH--IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
G F M +H I P V+HY CI+D+L R G L AY I MPI P+ +WGALL
Sbjct: 619 GWRFFNIM-RHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCG 677
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
C H +V+L E A FELEPENTG Y+L+AN+YA +W V+++R + + GLRK P
Sbjct: 678 CRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNP 737
Query: 298 AQSLVEV 304
S +E+
Sbjct: 738 GCSWIEI 744
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 126/238 (52%), Gaps = 7/238 (2%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F + +++ WN++++G++ N LA + + +F QMLV ++ D AT S+ A
Sbjct: 251 KVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSR 310
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
+ +H +++ F + L+D+YSKCG L A +F + D+ ++ ++++
Sbjct: 311 LISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFR--EMSDRSVVSYTSM 368
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
IA Y + G AV LF EM + G+ P+ T T+VL+ C+ L+DEG + +++ ++ +
Sbjct: 369 IAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDL 428
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA----CVSHENVEL 246
+ ++D+ + G + +A + M +K + W ++G C ++E + L
Sbjct: 429 GFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK-DIISWNTIIGGYSKNCYANEALSL 485
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 115/213 (53%), Gaps = 3/213 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC + + +F + S + + ++++G+ LA EA++LF++M E + PD T
Sbjct: 340 MYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYT 399
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
++L A L + +H ++ + + + V++ L+D+Y+KCGS+ A +F+
Sbjct: 400 VTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFS--E 457
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG-VKPNQVTFTSVLHACSHVGLVDE 179
++ KDII W+ II Y K+ + A+SLFN +++ P++ T VL AC+ + D+
Sbjct: 458 MRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDK 517
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRL 212
G + +++++ ++D+ + G L
Sbjct: 518 GREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL 550
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 112/223 (50%), Gaps = 4/223 (1%)
Query: 6 NCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNS 63
NCG+L + ++F + ++ WN +++ + +I LFK+M+ V+ D+ TF+
Sbjct: 141 NCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSC 200
Query: 64 LLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD 123
+ +++ L + +H ++++SGF R V + LV Y K + A +F+ + +
Sbjct: 201 VSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFD--EMTE 258
Query: 124 KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSL 183
+D+I W++II Y +G E +S+F +M+ SG++ + T SV C+ L+ G ++
Sbjct: 259 RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAV 318
Query: 184 FQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKP 226
+K ++D+ + G LD A + R M +
Sbjct: 319 HSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 97/232 (41%), Gaps = 5/232 (2%)
Query: 16 MKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLK 75
+ T + N L F + A++L D+ P T S+L A LK
Sbjct: 54 ITTFDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDP--RTLCSVLQLCADSKSLK 111
Query: 76 QAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAA 135
+ ++ +GF+ + S L +Y+ CG L A +F+ +K + + W+ ++
Sbjct: 112 DGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFD--EVKIEKALFWNILMNE 169
Query: 136 YGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPL 195
K G ++ LF +M+ SGV+ + TF+ V + S + V G L F+LK
Sbjct: 170 LAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGER 229
Query: 196 VDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 247
++ + R+D A + M + + W +++ VS+ E G
Sbjct: 230 NSVGNSLVAFYLKNQRVDSARKVFDEMT-ERDVISWNSIINGYVSNGLAEKG 280
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 267 bits (682), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 135/304 (44%), Positives = 189/304 (62%), Gaps = 2/304 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + +F K WNA++SG+ N AREAI +F +M+ +DV+PD +
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S + A A + L+QA +++ Y+ RS + + ++S L+D+++KCGS+ A +F+
Sbjct: 326 ITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFD--R 383
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
D+D+++WSA+I YG HG A+SL+ M + GV PN VTF +L AC+H G+V EG
Sbjct: 384 TLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
F M H I P HY C+IDLLGRAG LD AY +I+ MP++P VWGALL AC
Sbjct: 444 WWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKK 503
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H +VELGE AA+ F ++P NTG+Y+ L+NLYAA W V +VR + E GL K S
Sbjct: 504 HRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCS 563
Query: 301 LVEV 304
VEV
Sbjct: 564 WVEV 567
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 131/239 (54%), Gaps = 3/239 (1%)
Query: 1 MYAKCNCGNLSY--KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
++A + G++++ ++F + + PWNA++ G+ N+ ++A+ ++ M + V PD+
Sbjct: 60 IHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDS 119
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
TF LL A + L+ L+ +H + R GF + V + L+ +Y+KC LG A +F
Sbjct: 120 FTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEG 179
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
+PL ++ I+ W+AI++AY ++G A+ +F++M + VKP+ V SVL+A + + +
Sbjct: 180 LPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLK 239
Query: 179 EGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+G S+ ++K + D + + + G++ A L M PN +W A++
Sbjct: 240 QGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAMISG 297
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 263 bits (672), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/305 (43%), Positives = 195/305 (63%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAK S ++F + + WN++++G++ N EA++LF+QM+ V+P
Sbjct: 286 MYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVA 345
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F+S++PA A LA L +H Y++R GF + +AS LVD+YSKCG++ A IF+ +
Sbjct: 346 FSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN 405
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ D+ + W+AII + HGHG AVSLF EM + GVKPNQV F +VL ACSHVGLVDE
Sbjct: 406 VLDE--VSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEA 463
Query: 181 LSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F M K + + ++HY + DLLGRAG+L++AYN I M ++P +VW LL +C
Sbjct: 464 WGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCS 523
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H+N+EL E A F ++ EN G Y+L+ N+YA+ GRW+++ K+R + + GLRK PA
Sbjct: 524 VHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPAC 583
Query: 300 SLVEV 304
S +E+
Sbjct: 584 SWIEM 588
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 130/244 (53%), Gaps = 7/244 (2%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
++F +K +N +++G+ + + +A+++ ++M D++PD+ T +S+LP ++
Sbjct: 197 RVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYV 256
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
D+ + IH Y+IR G + + S LVD+Y+K + + +F+ + +D I W+++
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDG--ISWNSL 314
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
+A Y ++G A+ LF +MV + VKP V F+SV+ AC+H+ + G L ++L+
Sbjct: 315 VAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF 374
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGA-LLGACV---SHENVELGE 248
+ + ++D+ + G + A + M + + W A ++G + HE V L E
Sbjct: 375 GSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGHALHGHGHEAVSLFE 433
Query: 249 VAAR 252
R
Sbjct: 434 EMKR 437
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 262 bits (670), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 129/307 (42%), Positives = 197/307 (64%), Gaps = 5/307 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE--DVQPDN 58
MYA+ C + + +F + W+A+++ + N A EA++ F++M+ E D P++
Sbjct: 226 MYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNS 285
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
T S+L A A LA L+Q IH Y++R G L V S LV +Y +CG L +F+
Sbjct: 286 VTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFD- 344
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
+ D+D++ W+++I++YG HG+G+ A+ +F EM+ +G P VTF SVL ACSH GLV+
Sbjct: 345 -RMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVE 403
Query: 179 EGLSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
EG LF+ M + H I P ++HY C++DLLGRA RLD+A +++ M +P VWG+LLG+
Sbjct: 404 EGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGS 463
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
C H NVEL E A+R F LEP+N GNY+LLA++YA W +V++V+ ++ GL+KLP
Sbjct: 464 CRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLP 523
Query: 298 AQSLVEV 304
+ +EV
Sbjct: 524 GRCWMEV 530
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 114/219 (52%), Gaps = 8/219 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+ + + K+F KT K+ WNA+ E + L+ +M V+ D T
Sbjct: 121 MYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFT 180
Query: 61 FNSLLPA----YAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 116
+ +L A + L + IH +L R G+ + + + LVD+Y++ G + YA ++F
Sbjct: 181 YTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVF 240
Query: 117 NIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS--GVKPNQVTFTSVLHACSHV 174
+P+ ++++ WSA+IA Y K+G A+ F EM++ PN VT SVL AC+ +
Sbjct: 241 GGMPV--RNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASL 298
Query: 175 GLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLD 213
+++G + ++L+ + ++ + ++ + GR G+L+
Sbjct: 299 AALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLE 337
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 104/216 (48%), Gaps = 12/216 (5%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIR 86
N ++ ++AI++ Q + P T+ L+ + L A+ +H +++
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLSQ----ESSPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 87 SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAV 146
+G +A+ L+ +YS GS+ YA +F+ + + I +W+A+ A GHGE +
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFD--KTRKRTIYVWNALFRALTLAGHGEEVL 163
Query: 147 SLFNEMVQSGVKPNQVTFTSVLHAC----SHVGLVDEGLSLFQFMLKHHIIPLVDHYTCI 202
L+ +M + GV+ ++ T+T VL AC V + +G + + + V T +
Sbjct: 164 GLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTL 223
Query: 203 IDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
+D+ R G +D A + MP++ N W A++ AC
Sbjct: 224 VDMYARFGCVDYASYVFGGMPVR-NVVSWSAMI-AC 257
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 254 bits (648), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 128/307 (41%), Positives = 191/307 (62%), Gaps = 5/307 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNA 59
MY KC +Y +F + +K W A++SGF N +A +I+ F ML+E+ +PD
Sbjct: 308 MYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAI 367
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
+L + + L L+QA H Y+I+ GF + + LV++YS+CGSLG A +FN I
Sbjct: 368 LMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGI 427
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG-VKPNQVTFTSVLHACSHVGLVD 178
LKD ++W+++I YG HG G A+ FN MV+S VKPN+VTF S+L ACSH GL+
Sbjct: 428 ALKD--TVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIH 485
Query: 179 EGLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
EGL +F+ M+ + + P ++HY ++DLLGR G LD A + + MP P + G LLGA
Sbjct: 486 EGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGA 545
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
C H+N E+ E A+ FELE + G Y+L++N+Y G W +VEK+R+ V + G++K
Sbjct: 546 CRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGL 605
Query: 298 AQSLVEV 304
A+SL+E+
Sbjct: 606 AESLIEI 612
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 125/238 (52%), Gaps = 4/238 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQM-LVEDVQPDNA 59
MY KC + +MF + K W++++SGF N +A++ F++M + DV PD
Sbjct: 105 MYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRV 164
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T +L+ A L++ + +H ++IR GF L + + L++ Y+K + A ++F +I
Sbjct: 165 TLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI 224
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+KD+I WS +IA Y ++G A+ +FN+M+ G +PN T VL AC+ +++
Sbjct: 225 A--EKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQ 282
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
G + ++ + V T ++D+ + ++AY + +P K + W AL+
Sbjct: 283 GRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRK-DVVSWVALISG 339
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 123/237 (51%), Gaps = 8/237 (3%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YAK + +F ++K W+ V++ ++ N A EA+ +F M+ + +P+ AT
Sbjct: 208 YAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATV 267
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+L A A DL+Q H IR G ++V++ LVD+Y KC S A+ +F+ IP
Sbjct: 268 LCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP- 326
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEM-VQSGVKPNQVTFTSVLHACSHVGLVDEG 180
KD++ W A+I+ + +G ++ F+ M +++ +P+ + VL +CS +G +++
Sbjct: 327 -RKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQA 385
Query: 181 LSLFQFMLKHHII--PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+++K+ P + +++L R G L +A + + +K + VW +L+
Sbjct: 386 KCFHSYVIKYGFDSNPFIG--ASLVELYSRCGSLGNASKVFNGIALK-DTVVWTSLI 439
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 101/215 (46%), Gaps = 4/215 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
+MF + +K+ WN +L E + F M ++ +PDN T L A L
Sbjct: 15 QMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELR 74
Query: 73 DLKQAMNIHCYLIRSGFL-YRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
++ IH ++ + L L V S L+ +Y KCG + A +F+ L+ DI+ WS+
Sbjct: 75 EVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFD--ELEKPDIVTWSS 132
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
+++ + K+G AV F MV S V P++VT +++ AC+ + G + F+++
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 191 HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK 225
+ +++ ++ +A NL + + K
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEK 227
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 253 bits (647), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 185/292 (63%), Gaps = 3/292 (1%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
MF K KK WN ++ ++ N++ EA++L+ +M + +PD + S+LPA +
Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSA 324
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
L IH Y+ R + L + + L+D+Y+KCG L A +F +K +D++ W+A+I
Sbjct: 325 LSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFE--NMKSRDVVSWTAMI 382
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH-I 192
+AYG G G AV+LF+++ SG+ P+ + F + L ACSH GL++EG S F+ M H+ I
Sbjct: 383 SAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKI 442
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAAR 252
P ++H C++DLLGRAG++ +AY I+ M ++PN VWGALLGAC H + ++G +AA
Sbjct: 443 TPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAAD 502
Query: 253 WTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
F+L PE +G Y+LL+N+YA GRW +V +R+++ GL+K P S VEV
Sbjct: 503 KLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEV 554
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 78/162 (48%), Gaps = 2/162 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F + ++ N ++ +++N E +++F M +V+PD+ TF +L A +
Sbjct: 95 KVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSG 154
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
+ IH + G L V + LV +Y KCG L A + + + +D++ W+++
Sbjct: 155 TIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD--EMSRRDVVSWNSL 212
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHV 174
+ Y ++ + A+ + EM + + T S+L A S+
Sbjct: 213 VVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT 254
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 78/171 (45%), Gaps = 8/171 (4%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC C + +F + W A++S + + +A+ LF ++ + PD+
Sbjct: 353 MYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIA 412
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSG---FLYRLEVASILVDIYSKCGSLGYAHHIFN 117
F + L A + L++ + C+ + + RLE + +VD+ + G + A+
Sbjct: 413 FVTTLAACSHAGLLEEGRS--CFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQ 470
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVL 168
+ ++ + +W A++ A H ++ + +++ Q + P Q + +L
Sbjct: 471 DMSMEPNE-RVWGALLGACRVHSDTDIGLLAADKLFQ--LAPEQSGYYVLL 518
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 87/196 (44%), Gaps = 21/196 (10%)
Query: 40 REAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASIL 99
+E + L Q+L D PD T ++ + IL DL+ ++ L+R+
Sbjct: 39 QETVFLLGQVL--DTYPDIRTLRTV-HSRIILEDLRCNSSLGVKLMRA------------ 83
Query: 100 VDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKP 159
Y+ + A +F+ IP ++++II + +I +Y +G V +F M V+P
Sbjct: 84 ---YASLKDVASARKVFDEIP--ERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRP 138
Query: 160 NQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLI 219
+ TF VL ACS G + G + K + + ++ + G+ G L +A ++
Sbjct: 139 DHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL 198
Query: 220 RTMPIKPNHAVWGALL 235
M + + W +L+
Sbjct: 199 DEMS-RRDVVSWNSLV 213
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 250 bits (639), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 124/306 (40%), Positives = 191/306 (62%), Gaps = 4/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNA 59
MYAK + + +F WN ++SG+ N A EAI+++ M E ++ +
Sbjct: 393 MYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQG 452
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T+ S+LPA + L+Q M +H L+++G + V + L D+Y KCG L A +F I
Sbjct: 453 TWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQI 512
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
P + + W+ +IA +G HGHGE AV LF EM+ GVKP+ +TF ++L ACSH GLVDE
Sbjct: 513 PRVNS--VPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDE 570
Query: 180 GLSLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G F+ M + I P + HY C++D+ GRAG+L+ A I++M ++P+ ++WGALL AC
Sbjct: 571 GQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSAC 630
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H NV+LG++A+ FE+EPE+ G ++LL+N+YA+ G+W V+++R + + GLRK P
Sbjct: 631 RVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPG 690
Query: 299 QSLVEV 304
S +EV
Sbjct: 691 WSSMEV 696
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 145/307 (47%), Gaps = 48/307 (15%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F + + WN+++ + N AI LF++M + +QPD T SL + L
Sbjct: 303 KVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
Query: 73 DLKQAMNIHCYLIRSG-FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
D++ ++ + +R G FL + + + +V +Y+K G + A +FN +P + D+I W+
Sbjct: 363 DIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP--NTDVISWNT 420
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSG-VKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
II+ Y ++G A+ ++N M + G + NQ T+ SVL ACS G + +G+ L +LK+
Sbjct: 421 IISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN 480
Query: 191 HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP--------------------------- 223
+ V T + D+ G+ GRL+DA +L +P
Sbjct: 481 GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLF 540
Query: 224 -------IKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTG------NYILLAN 270
+KP+H + LL AC V+ G+ W FE+ + G +Y + +
Sbjct: 541 KEMLDEGVKPDHITFVTLLSACSHSGLVDEGQ----WCFEMMQTDYGITPSLKHYGCMVD 596
Query: 271 LYAAVGR 277
+Y G+
Sbjct: 597 MYGRAGQ 603
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 122/237 (51%), Gaps = 15/237 (6%)
Query: 5 CNCGN--LSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQ-MLVEDVQPDNATF 61
C GN L+ F + WN ++SG+ + E I+ F ML + PD TF
Sbjct: 97 CYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTF 156
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
S+L A + D IHC ++ GF++ + VA+ L+ +YS+ ++G A +F+ +P+
Sbjct: 157 PSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPV 213
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKP-NQVTFTSVLHACSHVGLVDEG 180
+D+ W+A+I+ Y + G+ + A++L N G++ + VT S+L AC+ G + G
Sbjct: 214 --RDMGSWNAMISGYCQSGNAKEALTLSN-----GLRAMDSVTVVSLLSACTEAGDFNRG 266
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+++ + +KH + + +IDL GRL D + M ++ + W +++ A
Sbjct: 267 VTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR-DLISWNSIIKA 322
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 7/211 (3%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F + + WNA++SG+ + A+EA+ L + D+ T SLL A D
Sbjct: 207 LFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAGD 262
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
+ + IH Y I+ G L V++ L+D+Y++ G L +F+ + + +D+I W++II
Sbjct: 263 FNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYV--RDLISWNSII 320
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML-KHHI 192
AY + A+SLF EM S ++P+ +T S+ S +G + S+ F L K
Sbjct: 321 KAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWF 380
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP 223
+ + ++ + + G +D A + +P
Sbjct: 381 LEDITIGNAVVVMYAKLGLVDSARAVFNWLP 411
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 250 bits (638), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 187/305 (61%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y++C SY F +T WNA++SGF + EA+++F +M E + +N T
Sbjct: 635 LYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFT 694
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S + A + A++KQ +H + ++G+ EV + L+ +Y+KCGS+ A F +
Sbjct: 695 FGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQF--LE 752
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ K+ + W+AII AY KHG G A+ F++M+ S V+PN VT VL ACSH+GLVD+G
Sbjct: 753 VSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKG 812
Query: 181 LSLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
++ F+ M ++ + P +HY C++D+L RAG L A I+ MPIKP+ VW LL ACV
Sbjct: 813 IAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACV 872
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H+N+E+GE AA ELEPE++ Y+LL+NLYA +W + R + E G++K P Q
Sbjct: 873 VHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQ 932
Query: 300 SLVEV 304
S +EV
Sbjct: 933 SWIEV 937
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 119/245 (48%), Gaps = 3/245 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YAKC + F++T + WN +L + R + ++F+QM +E++ P+ T
Sbjct: 433 LYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYT 492
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ S+L L DL+ IH +I++ F V S+L+D+Y+K G L A I +I
Sbjct: 493 YPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI--LIR 550
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
KD++ W+ +IA Y ++ + A++ F +M+ G++ ++V T+ + AC+ + + EG
Sbjct: 551 FAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 610
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ + ++ L R G+++++Y N A W AL+
Sbjct: 611 QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIA-WNALVSGFQQ 669
Query: 241 HENVE 245
N E
Sbjct: 670 SGNNE 674
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 109/241 (45%), Gaps = 3/241 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAK + ++ + ++ + K W +++G+ + +A+ F+QML ++ D
Sbjct: 534 MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 593
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ + A A L LK+ IH SGF L + LV +YS+CG + ++ F
Sbjct: 594 LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE 653
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
D I W+A+++ + + G+ E A+ +F M + G+ N TF S + A S + +G
Sbjct: 654 AGDN--IAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQG 711
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ + K + +I + + G + DA + K N W A++ A
Sbjct: 712 KQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK-NEVSWNAIINAYSK 770
Query: 241 H 241
H
Sbjct: 771 H 771
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 127/282 (45%), Gaps = 36/282 (12%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y++ +L+ ++F K + W A++SG N EAI+LF M V + P
Sbjct: 231 LYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYA 290
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F+S+L A + L+ +H +++ GF V + LV +Y G+L A HIF+
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFS--N 348
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ +D + ++ +I + G+GE A+ LF M G++P+ T S++ ACS G + G
Sbjct: 349 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 408
Query: 181 LSLFQFMLKHHIIP-------LVDHYTCIID---------------------LLGRAGRL 212
L + K L++ Y D +L G L
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLL 468
Query: 213 DD---AYNLIRTMPIK---PNHAVWGALLGACVSHENVELGE 248
DD ++ + R M I+ PN + ++L C+ ++ELGE
Sbjct: 469 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 510
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 11/217 (5%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY-- 68
++K+F + ++ WN ++ +L E LF +M+ E+V P+ TF+ +L A
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 69 -AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDII 127
++ D+ + IH ++ G V + L+D+YS+ G + A +F+ + LKD
Sbjct: 199 GSVAFDVVE--QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHS-- 254
Query: 128 IWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM 187
W A+I+ K+ A+ LF +M G+ P F+SVL AC + ++ G L +
Sbjct: 255 SWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLV 314
Query: 188 LKHHIIPLVDHYTC--IIDLLGRAGRLDDAYNLIRTM 222
LK D Y C ++ L G L A ++ M
Sbjct: 315 LKLGFSS--DTYVCNALVSLYFHLGNLISAEHIFSNM 349
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 248 bits (634), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 122/304 (40%), Positives = 190/304 (62%), Gaps = 3/304 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YA+C + + +F K K+ W A+++G+ + + EA++LF QM E + + ++F
Sbjct: 353 YAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSF 412
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+S L A + L+ +H L++ G+ V + L+ +Y KCGS+ A+ +F +
Sbjct: 413 SSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFK--EM 470
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
KDI+ W+ +IA Y +HG GE+A+ F M + G+KP+ T +VL ACSH GLVD+G
Sbjct: 471 AGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGR 530
Query: 182 SLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
F M + + ++P HY C++DLLGRAG L+DA+NL++ MP +P+ A+WG LLGA
Sbjct: 531 QYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRV 590
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H N EL E AA F +EPEN+G Y+LL+NLYA+ GRW DV K+R + + G++K+P S
Sbjct: 591 HGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYS 650
Query: 301 LVEV 304
+E+
Sbjct: 651 WIEI 654
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 108/244 (44%), Gaps = 35/244 (14%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN--- 58
YA+ C + + +F + +K WNA+LS ++ NS EA LFK +N
Sbjct: 167 YAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSR-------ENWAL 219
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASI-----LVDIYSKCGSLGYAH 113
++N LL + + +A F + V + ++ Y++ G + A
Sbjct: 220 VSWNCLLGGFVKKKKIVEARQ---------FFDSMNVRDVVSWNTIITGYAQSGKIDEAR 270
Query: 114 HIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSH 173
+F+ P+ +D+ W+A+++ Y ++ E A LF++M + N+V++ ++L
Sbjct: 271 QLFDESPV--QDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQ 324
Query: 174 VGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGA 233
++ LF M + V + +I + G++ +A NL MP K + W A
Sbjct: 325 GERMEMAKELFDVMPCRN----VSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAA 379
Query: 234 LLGA 237
++
Sbjct: 380 MIAG 383
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 118/275 (42%), Gaps = 46/275 (16%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K +K WN +S ++ EA+++FK+M + + ++N ++ Y
Sbjct: 54 KPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRM----PRWSSVSYNGMISGYLRNG 109
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
+ + A + + + ++++ Y + +LG A +F I+P ++D+ W+ +
Sbjct: 110 EFELARKLFDEMPERDLV----SWNVMIKGYVRNRNLGKARELFEIMP--ERDVCSWNTM 163
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQ------- 185
++ Y ++G + A S+F+ M + N V++ ++L A ++E LF+
Sbjct: 164 LSGYAQNGCVDDARSVFDRMPE----KNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL 219
Query: 186 ---------FMLKHHIIPL-----------VDHYTCIIDLLGRAGRLDDAYNLIRTMPIK 225
F+ K I+ V + II ++G++D+A L P++
Sbjct: 220 VSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ 279
Query: 226 PNHAVWGALLGACVSHENVELGEVAARWTFELEPE 260
+ W A++ + + VE AR F+ PE
Sbjct: 280 -DVFTWTAMVSGYIQNRMVE----EARELFDKMPE 309
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 71/146 (48%), Gaps = 2/146 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + +F + + K WN +++G+ + A++ F+ M E ++PD+AT
Sbjct: 453 MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDAT 512
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
++L A + + + + + G + + + +VD+ + G L AH++ +
Sbjct: 513 MVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 572
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMA 145
P + D IW ++ A HG+ E+A
Sbjct: 573 PF-EPDAAIWGTLLGASRVHGNTELA 597
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 134/315 (42%), Gaps = 51/315 (16%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y + N + ++F + + + +N ++SG++ N A +LF +M D+ ++
Sbjct: 74 YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL----VSW 129
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVAS--ILVDIYSKCGSLGYAHHIFNII 119
N ++ Y +L +A + + +V S ++ Y++ G + A +F+ +
Sbjct: 130 NVMIKGYVRNRNLGKARELF------EIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRM 183
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLF-----------NEMVQSGVKPNQ------- 161
P +K+ + W+A+++AY ++ E A LF N ++ VK +
Sbjct: 184 P--EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQF 241
Query: 162 ---------VTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRL 212
V++ +++ + G +DE LF + V +T ++ + +
Sbjct: 242 FDSMNVRDVVSWNTIITGYAQSGKIDEARQLFD----ESPVQDVFTWTAMVSGYIQNRMV 297
Query: 213 DDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEP-ENTGNYILLANL 271
++A L MP + N W A+L V E +E+ A+ F++ P N + +
Sbjct: 298 EEARELFDKMPER-NEVSWNAMLAGYVQGERMEM----AKELFDVMPCRNVSTWNTMITG 352
Query: 272 YAAVGRWRDVEKVRD 286
YA G+ + + + D
Sbjct: 353 YAQCGKISEAKNLFD 367
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 248 bits (632), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 193/306 (63%), Gaps = 4/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC NL+Y++F + SK+ WN++++ + AI +F+QM V + D +
Sbjct: 485 MYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVS 544
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
++ L A A L IH ++I+ + S L+D+Y+KCG+L A ++F
Sbjct: 545 ISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKT-- 602
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSVLHACSHVGLVDE 179
+K+K+I+ W++IIAA G HG + ++ LF+EMV+ SG++P+Q+TF ++ +C HVG VDE
Sbjct: 603 MKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDE 662
Query: 180 GLSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G+ F+ M + + I P +HY C++DL GRAGRL +AY +++MP P+ VWG LLGAC
Sbjct: 663 GVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGAC 722
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H+NVEL EVA+ +L+P N+G Y+L++N +A W V KVR ++ E ++K+P
Sbjct: 723 RLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPG 782
Query: 299 QSLVEV 304
S +E+
Sbjct: 783 YSWIEI 788
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 127/243 (52%), Gaps = 3/243 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC + + K+F S+ T WN ++SG++ + L E++ F +M+ V PD T
Sbjct: 283 MYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAIT 342
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F+SLLP+ + +L+ IHCY++R + + S L+D Y KC + A +IF+
Sbjct: 343 FSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFS--Q 400
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
D+++++A+I+ Y +G ++ +F +V+ + PN++T S+L + + G
Sbjct: 401 CNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLG 460
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
L F++K + +ID+ + GR++ AY + + K + W +++ C
Sbjct: 461 RELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRCAQ 519
Query: 241 HEN 243
+N
Sbjct: 520 SDN 522
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 137/294 (46%), Gaps = 17/294 (5%)
Query: 1 MYAKC----NCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQP 56
MYA C +CG + Y++ ++ S R PWN+++S F+ N L +A+ + +ML V P
Sbjct: 79 MYAMCGSFSDCGKMFYRLDLRRSSIR--PWNSIISSFVRNGLLNQALAFYFKMLCFGVSP 136
Query: 57 DNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 116
D +TF L+ A L + K + + G VAS L+ Y + G + +F
Sbjct: 137 DVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLF 196
Query: 117 NIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGL 176
+ + KD +IW+ ++ Y K G + + F+ M + PN VTF VL C+ L
Sbjct: 197 DRV--LQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLL 254
Query: 177 VDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG 236
+D G+ L ++ + ++ + + GR DDA L R M + + W
Sbjct: 255 IDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADTVTWN---- 309
Query: 237 ACVSHENVELGEVAARWTFELEPENTG---NYILLANLYAAVGRWRDVEKVRDM 287
C+ V+ G + TF E ++G + I ++L +V ++ ++E + +
Sbjct: 310 -CMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQI 362
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 96/182 (52%), Gaps = 6/182 (3%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLP--AYAI 70
K+F + +K WN +L+G+ I+ F M ++ + P+ TF+ +L A +
Sbjct: 194 KLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKL 253
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
L DL + +H ++ SG + + + L+ +YSKCG A +F + + D + W+
Sbjct: 254 LIDL--GVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRM--MSRADTVTWN 309
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
+I+ Y + G E +++ F EM+ SGV P+ +TF+S+L + S ++ + ++++H
Sbjct: 310 CMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRH 369
Query: 191 HI 192
I
Sbjct: 370 SI 371
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 107/257 (41%), Gaps = 45/257 (17%)
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
L+Q +H +LI + ++ +Y+ CGS +F + L+ I W++II
Sbjct: 51 LRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSII 110
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHAC----------------SHVG-- 175
+++ ++G A++ + +M+ GV P+ TF ++ AC S +G
Sbjct: 111 SSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMD 170
Query: 176 --------LVDEGLSLFQFMLKHHIIPLVDHYTCII-----DLLGRAGRLDD---AYNLI 219
L+ L + + + V C+I + + G LD ++++
Sbjct: 171 CNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVM 230
Query: 220 RTMPIKPNHAVWGALLGACVSHENVELG------EVAARWTFELEPENTGNYILLANLYA 273
R I PN + +L C S ++LG V + FE +N+ L ++Y+
Sbjct: 231 RMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNS-----LLSMYS 285
Query: 274 AVGRWRDVEKVRDMVNE 290
GR+ D K+ M++
Sbjct: 286 KCGRFDDASKLFRMMSR 302
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 247 bits (631), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 120/305 (39%), Positives = 193/305 (63%), Gaps = 4/305 (1%)
Query: 2 YAKCNCGNLSYKMFMK-TSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
Y K L+ MF T K WNA++SG++ NS + ++LF+ ML E ++P+++
Sbjct: 227 YMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSG 286
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+S L + L+ L+ IH + +S + + L+ +Y KCG LG A +F +
Sbjct: 287 LSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEV-- 344
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+K KD++ W+A+I+ Y +HG+ + A+ LF EM+ + ++P+ +TF +VL AC+H GLV+ G
Sbjct: 345 MKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIG 404
Query: 181 LSLFQFMLKHHII-PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
++ F+ M++ + + P DHYTC++DLLGRAG+L++A LIR+MP +P+ AV+G LLGAC
Sbjct: 405 MAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACR 464
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H+NVEL E AA +L +N Y+ LAN+YA+ RW DV +VR + E + K+P
Sbjct: 465 VHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGY 524
Query: 300 SLVEV 304
S +E+
Sbjct: 525 SWIEI 529
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 116/268 (43%), Gaps = 45/268 (16%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
++++F + + T +N +LS ++ N +A F +M +D A++N+++ YA
Sbjct: 112 AHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDA----ASWNTMITGYAR 167
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVA-SILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIW 129
++++A + ++ EV+ + ++ Y +CG L A H F + P++ ++ W
Sbjct: 168 RGEMEKARELFYSMMEKN-----EVSWNAMISGYIECGDLEKASHFFKVAPVRG--VVAW 220
Query: 130 SAIIAAYGKHGHGEMA--------------------------------VSLFNEMVQSGV 157
+A+I Y K E+A + LF M++ G+
Sbjct: 221 TAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGI 280
Query: 158 KPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYN 217
+PN +S L CS + + G + Q + K + V T +I + + G L DA+
Sbjct: 281 RPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWK 340
Query: 218 LIRTMPIKPNHAVWGALLGACVSHENVE 245
L M K + W A++ H N +
Sbjct: 341 LFEVMK-KKDVVAWNAMISGYAQHGNAD 367
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 247 bits (630), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 119/285 (41%), Positives = 187/285 (65%), Gaps = 3/285 (1%)
Query: 21 KRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNI 80
+ W V+SG+ + A EAI++F++ML+E+V+PD T ++L A A L L+ I
Sbjct: 213 RNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERI 272
Query: 81 HCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHG 140
Y+ G + + + ++D+Y+K G++ A +F + +++++ W+ IIA HG
Sbjct: 273 CSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECV--NERNVVTWTTIIAGLATHG 330
Query: 141 HGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML-KHHIIPLVDHY 199
HG A+++FN MV++GV+PN VTF ++L ACSHVG VD G LF M K+ I P ++HY
Sbjct: 331 HGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHY 390
Query: 200 TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEP 259
C+IDLLGRAG+L +A +I++MP K N A+WG+LL A H ++ELGE A +LEP
Sbjct: 391 GCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEP 450
Query: 260 ENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
N+GNY+LLANLY+ +GRW + +R+M+ +G++K+ +S +EV
Sbjct: 451 NNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEV 495
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/332 (20%), Positives = 135/332 (40%), Gaps = 81/332 (24%)
Query: 33 FIHNSLARE------------AIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNI 80
++HN++ R AI +++++ +PD TF +L ++D+ I
Sbjct: 79 YLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQI 138
Query: 81 HCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDI-------------- 126
H ++ GF + V + L+ +Y CG LG A +F+ + +KD ++
Sbjct: 139 HGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEM 198
Query: 127 -----------------IIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLH 169
+ W+ +I+ Y K G A+ +F M+ V+P++VT +VL
Sbjct: 199 DEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLS 258
Query: 170 ACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDA-------------- 215
AC+ +G ++ G + ++ + V +ID+ ++G + A
Sbjct: 259 ACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVT 318
Query: 216 --------------------YNLIRTMPIKPNHAVWGALLGACVSHENVELGEV---AAR 252
+N + ++PN + A+L AC V+LG+ + R
Sbjct: 319 WTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMR 378
Query: 253 WTFELEPENTGNYILLANLYAAVGRWRDVEKV 284
+ + P N +Y + +L G+ R+ ++V
Sbjct: 379 SKYGIHP-NIEHYGCMIDLLGRAGKLREADEV 409
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 89/190 (46%), Gaps = 7/190 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAK + +F +++ W +++G + EA+ +F +M+ V+P++ T
Sbjct: 294 MYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVT 353
Query: 61 FNSLLPAYAILA--DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
F ++L A + + DL + + + + G +E ++D+ + G L A +
Sbjct: 354 FIAILSACSHVGWVDLGKRL-FNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKS 412
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQV-TFTSVLHACSHVGLV 177
+P K + IW +++AA H E+ +E+++ ++PN + + + S++G
Sbjct: 413 MPFK-ANAAIWGSLLAASNVHHDLELGERALSELIK--LEPNNSGNYMLLANLYSNLGRW 469
Query: 178 DEGLSLFQFM 187
DE + M
Sbjct: 470 DESRMMRNMM 479
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 246 bits (629), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 120/304 (39%), Positives = 188/304 (61%), Gaps = 3/304 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC ++F + K WNAV+SG+ N LA + ++L++QM V PD T
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFT 259
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L + A L K + + +GF+ + V++ + +Y++CG+L A +F+I+P
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+K ++ W+A+I YG HG GE+ + LF++M++ G++P+ F VL ACSH GL D+G
Sbjct: 320 VKS--LVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKG 377
Query: 181 LSLFQFMLKHHII-PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
L LF+ M + + + P +HY+C++DLLGRAGRLD+A I +MP++P+ AVWGALLGAC
Sbjct: 378 LELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACK 437
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H+NV++ E+A E EP N G Y+L++N+Y+ + ++R M+ E RK P
Sbjct: 438 IHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGY 497
Query: 300 SLVE 303
S VE
Sbjct: 498 SYVE 501
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 123/249 (49%), Gaps = 5/249 (2%)
Query: 1 MYAKCNCGNLSYKMFMKT--SKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
MY KC + K+F + S + + +NA++SG+ NS +A +F++M V D+
Sbjct: 97 MYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDS 156
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
T L+P + L ++H ++ G + V + + +Y KCGS+ +F+
Sbjct: 157 VTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDE 216
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
+P+ K +I W+A+I+ Y ++G + L+ +M SGV P+ T SVL +C+H+G
Sbjct: 217 MPV--KGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKK 274
Query: 179 EGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G + + + + +P V I + R G L A + MP+K + W A++G
Sbjct: 275 IGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVK-SLVSWTAMIGCY 333
Query: 239 VSHENVELG 247
H E+G
Sbjct: 334 GMHGMGEIG 342
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 1/215 (0%)
Query: 23 TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHC 82
+ PWN L + SL E+I L++ ML PD +F +L + A L+ +HC
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77
Query: 83 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHG 142
++ + G V + L+ +Y KCG + A +F P + + ++A+I+ Y +
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 143 EMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCI 202
A +F M ++GV + VT ++ C+ + G SL +K + V
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSF 197
Query: 203 IDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
I + + G ++ L MP+K W A++
Sbjct: 198 ITMYMKCGSVEAGRRLFDEMPVK-GLITWNAVISG 231
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 246 bits (629), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/305 (42%), Positives = 186/305 (60%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + + MF K + WNA++ GF N +A+ F QM V+PD T
Sbjct: 381 MYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFT 440
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ S++ A A L+ A IH ++RS + V + LVD+Y+KCG++ A IF++
Sbjct: 441 YVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDM-- 498
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ ++ + W+A+I YG HG G+ A+ LF EM + +KPN VTF SV+ ACSH GLV+ G
Sbjct: 499 MSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAG 558
Query: 181 LSLFQFMLKHHIIPL-VDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
L F M +++ I L +DHY ++DLLGRAGRL++A++ I MP+KP V+GA+LGAC
Sbjct: 559 LKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQ 618
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H+NV E AA FEL P++ G ++LLAN+Y A W V +VR + GLRK P
Sbjct: 619 IHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGC 678
Query: 300 SLVEV 304
S+VE+
Sbjct: 679 SMVEI 683
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 111/180 (61%), Gaps = 2/180 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC N + K+F + ++ WN +++G+ N +AR A+++ K M E+++P T
Sbjct: 179 MYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFIT 238
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+LPA + L + IH Y +RSGF + +++ LVD+Y+KCGSL A +F+
Sbjct: 239 IVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFD--G 296
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ +++++ W+++I AY ++ + + A+ +F +M+ GVKP V+ LHAC+ +G ++ G
Sbjct: 297 MLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG 356
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 125/241 (51%), Gaps = 5/241 (2%)
Query: 5 CNCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFN 62
C G++ + ++F K ++ +L GF S +A+Q F +M +DV+P F
Sbjct: 80 CRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFT 139
Query: 63 SLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK 122
LL A+L+ IH L++SGF L + L ++Y+KC + A +F+ +P
Sbjct: 140 YLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP-- 197
Query: 123 DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLS 182
++D++ W+ I+A Y ++G MA+ + M + +KP+ +T SVL A S + L+ G
Sbjct: 198 ERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKE 257
Query: 183 LFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHE 242
+ + ++ LV+ T ++D+ + G L+ A L M ++ N W +++ A V +E
Sbjct: 258 IHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSWNSMIDAYVQNE 316
Query: 243 N 243
N
Sbjct: 317 N 317
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 120/241 (49%), Gaps = 3/241 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + ++F ++ WN+++ ++ N +EA+ +F++ML E V+P + +
Sbjct: 280 MYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 339
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
L A A L DL++ IH + G + V + L+ +Y KC + A +F
Sbjct: 340 VMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFG--K 397
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
L+ + ++ W+A+I + ++G A++ F++M VKP+ T+ SV+ A + + +
Sbjct: 398 LQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA 457
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ +++ + V T ++D+ + G + A LI M + + W A++ +
Sbjct: 458 KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGT 516
Query: 241 H 241
H
Sbjct: 517 H 517
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 188/289 (65%), Gaps = 3/289 (1%)
Query: 17 KTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQ 76
+T + W ++++G N EA++LF++M V V+P++ T S+LPA +A L
Sbjct: 347 QTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGH 406
Query: 77 AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAY 136
+ H + +R L + V S L+D+Y+KCG + + +FN++P K+++ W++++ +
Sbjct: 407 GRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP--TKNLVCWNSLMNGF 464
Query: 137 GKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH-IIPL 195
HG + +S+F ++++ +KP+ ++FTS+L AC VGL DEG F+ M + + I P
Sbjct: 465 SMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPR 524
Query: 196 VDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTF 255
++HY+C+++LLGRAG+L +AY+LI+ MP +P+ VWGALL +C NV+L E+AA F
Sbjct: 525 LEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLF 584
Query: 256 ELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
LEPEN G Y+LL+N+YAA G W +V+ +R+ + +GL+K P S ++V
Sbjct: 585 HLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQV 633
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 131/291 (45%), Gaps = 48/291 (16%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
WN +LSGF + +EA+ +F+++ PD T +S+LP+ L IH Y+I
Sbjct: 220 WNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVI 279
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDK--------------------- 124
+ G L V S ++D+Y K G H++ II L ++
Sbjct: 280 KQGLLKDKCVISAMIDMYGKSG------HVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 125 ------------------DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTS 166
+++ W++IIA ++G A+ LF EM +GVKPN VT S
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPS 393
Query: 167 VLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKP 226
+L AC ++ + G S F ++ H++ V + +ID+ + GR++ + + MP K
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK- 452
Query: 227 NHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGR 277
N W +L+ H + EV + + + ++I +L +A G+
Sbjct: 453 NLVCWNSLMNGFSMHGKAK--EVMSIFESLMRTRLKPDFISFTSLLSACGQ 501
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 4/199 (2%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y+ NC N + + +++++ L ++I +F +M + PD+
Sbjct: 60 YSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVL 119
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+L A L+ K IHC SG V + +Y +CG +G A +F+ +
Sbjct: 120 PNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFD--RM 177
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
DKD++ SA++ AY + G E V + +EM SG++ N V++ +L + G E +
Sbjct: 178 SDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAV 237
Query: 182 SLFQFMLKHHIIPLVDHYT 200
+FQ + HH+ D T
Sbjct: 238 VMFQKI--HHLGFCPDQVT 254
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC NLS +F K WN++++GF + A+E + +F+ ++ ++PD +
Sbjct: 432 MYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFIS 491
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F SLL A + + + G RLE S +V++ + G L A+ + +
Sbjct: 492 FTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEM 551
Query: 120 PLKDKDIIIWSAII 133
P + D +W A++
Sbjct: 552 PF-EPDSCVWGALL 564
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 245 bits (626), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/304 (39%), Positives = 185/304 (60%), Gaps = 3/304 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YA+ + +F K W A++SG+ EA+ F++M + ++PD +
Sbjct: 185 YARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISL 244
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
S+LP+ A L L+ IH Y R GFL + V + L+++YSKCG + A +F +
Sbjct: 245 ISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFG--QM 302
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
+ KD+I WS +I+ Y HG+ A+ FNEM ++ VKPN +TF +L ACSHVG+ EGL
Sbjct: 303 EGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGL 362
Query: 182 SLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
F M + + I P ++HY C+ID+L RAG+L+ A + +TMP+KP+ +WG+LL +C +
Sbjct: 363 RYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRT 422
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
N+++ VA ELEPE+ GNY+LLAN+YA +G+W DV ++R M+ ++K P S
Sbjct: 423 PGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGS 482
Query: 301 LVEV 304
L+EV
Sbjct: 483 LIEV 486
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 138/314 (43%), Gaps = 42/314 (13%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQ-PDNATFNSLLPAYAIL 71
++F + S +N+++ + HNSL + I+++KQ+L + + PD TF + + A L
Sbjct: 63 RLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASL 122
Query: 72 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--------- 122
+H +L + G + + + L+D+Y K L AH +F+ + +
Sbjct: 123 GSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLL 182
Query: 123 --------------------DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQV 162
DK I+ W+A+I+ Y G A+ F EM +G++P+++
Sbjct: 183 SGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEI 242
Query: 163 TFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM 222
+ SVL +C+ +G ++ G + + + + +I++ + G + A L M
Sbjct: 243 SLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQM 302
Query: 223 PIKPNHAVWGALLGACVSHENVELGEVAARWTF------ELEPENTGNYILLANLYAAVG 276
K + W ++ H N A TF +++P N ++ L + + VG
Sbjct: 303 EGK-DVISWSTMISGYAYHGNAH----GAIETFNEMQRAKVKP-NGITFLGLLSACSHVG 356
Query: 277 RWRDVEKVRDMVNE 290
W++ + DM+ +
Sbjct: 357 MWQEGLRYFDMMRQ 370
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 82/156 (52%), Gaps = 4/156 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC + + ++F + K W+ ++SG+ ++ A AI+ F +M V+P+ T
Sbjct: 285 MYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGIT 344
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLY--RLEVASILVDIYSKCGSLGYAHHIFNI 118
F LL A + + ++ + + ++R + ++E L+D+ ++ G L A I
Sbjct: 345 FLGLLSACSHVGMWQEGLR-YFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKT 403
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ 154
+P+K D IW +++++ G+ ++A+ + +V+
Sbjct: 404 MPMK-PDSKIWGSLLSSCRTPGNLDVALVAMDHLVE 438
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 243 bits (620), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 119/304 (39%), Positives = 185/304 (60%), Gaps = 3/304 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y K +++ +F K ++K W ++SG++ + +EA+QLF +M DV+PDN +
Sbjct: 191 YVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSL 250
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+ L A A L L+Q IH YL ++ + +L+D+Y+KCG + A +F I
Sbjct: 251 ANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNI-- 308
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
K K + W+A+I+ Y HGHG A+S F EM + G+KPN +TFT+VL ACS+ GLV+EG
Sbjct: 309 KKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGK 368
Query: 182 SLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+F M + +++ P ++HY CI+DLLGRAG LD+A I+ MP+KPN +WGALL AC
Sbjct: 369 LIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRI 428
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H+N+ELGE ++P + G Y+ AN++A +W + R ++ E G+ K+P S
Sbjct: 429 HKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCS 488
Query: 301 LVEV 304
+ +
Sbjct: 489 TISL 492
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 111/245 (45%), Gaps = 30/245 (12%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
WN ++ GF + ++ L+++ML + TF SLL A + L+ ++ IH +
Sbjct: 83 WNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQIT 142
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD---------------------- 123
+ G+ + + L++ Y+ G+ AH +F+ IP D
Sbjct: 143 KLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALT 202
Query: 124 -------KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGL 176
K+ I W+ +I+ Y + + A+ LF+EM S V+P+ V+ + L AC+ +G
Sbjct: 203 LFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGA 262
Query: 177 VDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG 236
+++G + ++ K I +ID+ + G +++A + + + K A W AL+
Sbjct: 263 LEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQA-WTALIS 321
Query: 237 ACVSH 241
H
Sbjct: 322 GYAYH 326
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 2/146 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + ++F KK W A++SG+ ++ REAI F +M ++P+ T
Sbjct: 291 MYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVIT 350
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLY-RLEVASILVDIYSKCGSLGYAHHIFNII 119
F ++L A + +++ I + R L +E +VD+ + G L A +
Sbjct: 351 FTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEM 410
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMA 145
PLK + +IW A++ A H + E+
Sbjct: 411 PLK-PNAVIWGALLKACRIHKNIELG 435
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 241 bits (616), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 124/309 (40%), Positives = 192/309 (62%), Gaps = 7/309 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
Y+KC + ++F + +K WN+++SGF N LA EAIQ+F QM +PD+AT
Sbjct: 151 FYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSAT 210
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F SLL A A + +H Y+I G +++ + L+++YS+CG +G A +F+
Sbjct: 211 FVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFD--K 268
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS-GVKPNQVTFTSVLHACSHVGLVDE 179
+K+ ++ W+A+I+AYG HG+G+ AV LFN+M G PN VTF +VL AC+H GLV+E
Sbjct: 269 MKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEE 328
Query: 180 GLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNH---AVWGALL 235
G S+++ M K + +IP V+H+ C++D+LGRAG LD+AY I + A+W A+L
Sbjct: 329 GRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAML 388
Query: 236 GACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRK 295
GAC H N +LG A+ LEP+N G++++L+N+YA G+ +V +RD + LRK
Sbjct: 389 GACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRK 448
Query: 296 LPAQSLVEV 304
S++EV
Sbjct: 449 QVGYSVIEV 457
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 117/216 (54%), Gaps = 3/216 (1%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N+V+ L + +++ML +V P N TF S++ + A L+ L+ +HC+ +
Sbjct: 75 FNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAV 134
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
SGF V + LV YSKCG + A +F+ +P +K I+ W+++++ + ++G + A
Sbjct: 135 VSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMP--EKSIVAWNSLVSGFEQNGLADEA 192
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDL 205
+ +F +M +SG +P+ TF S+L AC+ G V G + Q+++ + V T +I+L
Sbjct: 193 IQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINL 252
Query: 206 LGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
R G + A + M + N A W A++ A +H
Sbjct: 253 YSRCGDVGKAREVFDKMK-ETNVAAWTAMISAYGTH 287
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 107/253 (42%), Gaps = 40/253 (15%)
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
+KQ +H +LI +G+ + + L+ + ++ Y H +F +PL D +++++I
Sbjct: 22 VKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDD--FLFNSVI 79
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLF------QFM 187
+ K V+ + M+ S V P+ TFTSV+ +C+ + + G + F
Sbjct: 80 KSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFG 139
Query: 188 LKHHI-IPLVDHYTCIIDLLG------------------------RAGRLDDAYNL---I 219
L ++ LV Y+ D+ G + G D+A + +
Sbjct: 140 LDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQM 199
Query: 220 RTMPIKPNHAVWGALLGACVSHENVELGEVAARWTF-ELEPENTGNYILLANLYAAVGRW 278
R +P+ A + +LL AC V LG ++ E N L NLY+ G
Sbjct: 200 RESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCG-- 257
Query: 279 RDVEKVRDMVNEV 291
DV K R++ +++
Sbjct: 258 -DVGKAREVFDKM 269
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 241 bits (615), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 115/303 (37%), Positives = 190/303 (62%), Gaps = 6/303 (1%)
Query: 6 NCGNLS--YKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNS 63
NCG+++ YK+F K +K WN+V++GF N EA+ L+ +M + ++PD T S
Sbjct: 35 NCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVS 94
Query: 64 LLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD 123
LL A A + L +H Y+I+ G L +++L+D+Y++CG + A +F+ + D
Sbjct: 95 LLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFD--EMVD 152
Query: 124 KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS-GVKPNQVTFTSVLHACSHVGLVDEGLS 182
K+ + W+++I +G G+ A+ LF M + G+ P ++TF +L+ACSH G+V EG
Sbjct: 153 KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE 212
Query: 183 LFQFMLKHHII-PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
F+ M + + I P ++H+ C++DLL RAG++ AY I++MP++PN +W LLGAC H
Sbjct: 213 YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH 272
Query: 242 ENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSL 301
+ +L E A +LEP ++G+Y+LL+N+YA+ RW DV+K+R + G++K+P SL
Sbjct: 273 GDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSL 332
Query: 302 VEV 304
VEV
Sbjct: 333 VEV 335
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 95/165 (57%), Gaps = 3/165 (1%)
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
+AD++ IH +IRSGF + V + L+ +Y+ CG + A+ +F+ +P +KD++ W+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMP--EKDLVAWN 58
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
++I + ++G E A++L+ EM G+KP+ T S+L AC+ +G + G + +M+K
Sbjct: 59 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 118
Query: 191 HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ + ++DL R GR+++A L M + N W +L+
Sbjct: 119 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 162
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 241 bits (614), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 115/303 (37%), Positives = 190/303 (62%), Gaps = 6/303 (1%)
Query: 6 NCGNLS--YKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNS 63
NCG+++ YK+F K +K WN+V++GF N EA+ L+ +M + ++PD T S
Sbjct: 168 NCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVS 227
Query: 64 LLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD 123
LL A A + L +H Y+I+ G L +++L+D+Y++CG + A +F+ + D
Sbjct: 228 LLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFD--EMVD 285
Query: 124 KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS-GVKPNQVTFTSVLHACSHVGLVDEGLS 182
K+ + W+++I +G G+ A+ LF M + G+ P ++TF +L+ACSH G+V EG
Sbjct: 286 KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE 345
Query: 183 LFQFMLKHHII-PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
F+ M + + I P ++H+ C++DLL RAG++ AY I++MP++PN +W LLGAC H
Sbjct: 346 YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH 405
Query: 242 ENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSL 301
+ +L E A +LEP ++G+Y+LL+N+YA+ RW DV+K+R + G++K+P SL
Sbjct: 406 GDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSL 465
Query: 302 VEV 304
VEV
Sbjct: 466 VEV 468
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 129/229 (56%), Gaps = 9/229 (3%)
Query: 11 SYKMFMKTSKK-RTAPWNAVLSGF--IHNSLAREAIQLFKQMLVED-VQPDNATFNSLLP 66
++K+F K K WN ++ G+ I NS++ A L+++M V V+PD T+ L+
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSIS--AFSLYREMRVSGLVEPDTHTYPFLIK 129
Query: 67 AYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDI 126
A +AD++ IH +IRSGF + V + L+ +Y+ CG + A+ +F+ +P +KD+
Sbjct: 130 AVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMP--EKDL 187
Query: 127 IIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQF 186
+ W+++I + ++G E A++L+ EM G+KP+ T S+L AC+ +G + G + +
Sbjct: 188 VAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVY 247
Query: 187 MLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
M+K + + ++DL R GR+++A L M + N W +L+
Sbjct: 248 MIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 295
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 239 bits (611), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/291 (40%), Positives = 180/291 (61%), Gaps = 2/291 (0%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F + WNA+++G S +A++LF+ ML + +P + ++ SL A +
Sbjct: 218 VFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGF 277
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
L+Q +H Y+I+SG + L+D+Y+K GS+ A IF+ L +D++ W++++
Sbjct: 278 LEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFD--RLAKRDVVSWNSLL 335
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII 193
AY +HG G+ AV F EM + G++PN+++F SVL ACSH GL+DEG ++ M K I+
Sbjct: 336 TAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIV 395
Query: 194 PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARW 253
P HY ++DLLGRAG L+ A I MPI+P A+W ALL AC H+N ELG AA
Sbjct: 396 PEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEH 455
Query: 254 TFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
FEL+P++ G +++L N+YA+ GRW D +VR + E G++K PA S VE+
Sbjct: 456 VFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEI 506
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 127/257 (49%), Gaps = 6/257 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + K+F K ++ W ++SG+ + +A+ F QML P+ T
Sbjct: 104 MYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFT 163
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+S++ A A +H + ++ GF + V S L+D+Y++ G + A +F+
Sbjct: 164 LSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFD--A 221
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
L+ ++ + W+A+IA + + E A+ LF M++ G +P+ ++ S+ ACS G +++G
Sbjct: 222 LESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG 281
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ +M+K + ++D+ ++G + DA + + K + W +LL A
Sbjct: 282 KWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQ 340
Query: 241 HENVELGEVAARWTFEL 257
H G+ A W E+
Sbjct: 341 H---GFGKEAVWWFEEM 354
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
Query: 54 VQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH 113
+ D +N+LL + L Q +H ++++S F + + + + L+++Y+KCGSL A
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 114 HIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSH 173
+F +P +D + W+ +I+ Y +H A+ FN+M++ G PN+ T +SV+ A +
Sbjct: 116 KVFEKMP--QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA 173
Query: 174 VGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGA 233
G L F +K V + ++DL R G +DDA + + + N W A
Sbjct: 174 ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR-NDVSWNA 232
Query: 234 LLGACVSHENVE 245
L+ E
Sbjct: 233 LIAGHARRSGTE 244
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 70/146 (47%), Gaps = 1/146 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAK + + K+F + +K+ WN++L+ + + +EA+ F++M ++P+ +
Sbjct: 306 MYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEIS 365
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S+L A + L + + + + + G + +VD+ + G L A +P
Sbjct: 366 FLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP 425
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAV 146
+ + IW A++ A H + E+
Sbjct: 426 I-EPTAAIWKALLNACRMHKNTELGA 450
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 239 bits (611), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 112/305 (36%), Positives = 197/305 (64%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YAKC + ++F K + W+++++G++ N EA+ L+++ ++ + T
Sbjct: 206 LYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFT 265
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+S++ A + LA L + +H + +SGF + VAS VD+Y+KCGSL ++ IF+
Sbjct: 266 LSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFS--E 323
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+++K++ +W+ II+ + KH + + LF +M Q G+ PN+VTF+S+L C H GLV+EG
Sbjct: 324 VQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEG 383
Query: 181 LSLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F+ M + + P V HY+C++D+LGRAG L +AY LI+++P P ++WG+LL +C
Sbjct: 384 RRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCR 443
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
++N+EL EVAA FELEPEN GN++LL+N+YAA +W ++ K R ++ + ++K+ +
Sbjct: 444 VYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGK 503
Query: 300 SLVEV 304
S +++
Sbjct: 504 SWIDI 508
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 120/240 (50%), Gaps = 3/240 (1%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y+KC L+ ++F ++ WN ++ + N + EA+ +F +M E + T
Sbjct: 106 YSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTI 165
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+S+L A + D + +HC +++ L V + L+D+Y+KCG + A +F +
Sbjct: 166 SSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFE--SM 223
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
+DK + WS+++A Y ++ + E A+ L+ + ++ NQ T +SV+ ACS++ + EG
Sbjct: 224 QDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGK 283
Query: 182 SLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
+ + K V + +D+ + G L ++Y +I + + N +W ++ H
Sbjct: 284 QMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESY-IIFSEVQEKNLELWNTIISGFAKH 342
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 3/170 (1%)
Query: 76 QAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAA 135
+A H +IR + + ++L++ YSKCG + A +F+ + ++ ++ W+ +I
Sbjct: 79 EAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFD--GMLERSLVSWNTMIGL 136
Query: 136 YGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPL 195
Y ++ A+ +F EM G K ++ T +SVL AC E L +K I
Sbjct: 137 YTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLN 196
Query: 196 VDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 245
+ T ++DL + G + DA + +M K + W +++ V ++N E
Sbjct: 197 LYVGTALLDLYAKCGMIKDAVQVFESMQDKSS-VTWSSMVAGYVQNKNYE 245
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 239 bits (609), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/294 (41%), Positives = 180/294 (61%), Gaps = 4/294 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
++F ++ A W V+ N EA+ LF M + V+P T S+L A LA
Sbjct: 286 RVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLA 345
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
L +H L+R F + VAS+L+ +Y KCG L + IF+ P KDII+W++I
Sbjct: 346 SLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFP--SKDIIMWNSI 403
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSG-VKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK-H 190
I+ Y HG GE A+ +F EM SG KPN+VTF + L ACS+ G+V+EGL +++ M
Sbjct: 404 ISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVF 463
Query: 191 HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVA 250
+ P+ HY C++D+LGRAGR ++A +I +M ++P+ AVWG+LLGAC +H +++ E
Sbjct: 464 GVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFC 523
Query: 251 ARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
A+ E+EPEN+G YILL+N+YA+ GRW DV ++R ++ +RK P S EV
Sbjct: 524 AKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEV 577
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 126/284 (44%), Gaps = 29/284 (10%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN--ATFNSLLPAYAI 70
K+F K + WN++++G+ N + R+A +LF +M PD ++N L+ Y
Sbjct: 38 KLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------PDRNIISWNGLVSGYMK 91
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
++ +A + + + + LV Y G + A +F +P K+K + W+
Sbjct: 92 NGEIDEARKVFDLMPERNVVS----WTALVKGYVHNGKVDVAESLFWKMPEKNK--VSWT 145
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
++ + + G + A L+ EM+ + + TS++H G VDE +F M +
Sbjct: 146 VMLIGFLQDGRIDDACKLY-EMIPD---KDNIARTSMIHGLCKEGRVDEAREIFDEMSER 201
Query: 191 HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVA 250
+I +T ++ G+ R+DDA + MP K W ++L V + +E E
Sbjct: 202 SVIT----WTTMVTGYGQNNRVDDARKIFDVMPEK-TEVSWTSMLMGYVQNGRIEDAEE- 255
Query: 251 ARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLR 294
FE+ P I + + +G+ ++ K R + + + R
Sbjct: 256 ---LFEVMP--VKPVIACNAMISGLGQKGEIAKARRVFDSMKER 294
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 238 bits (608), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 113/298 (37%), Positives = 184/298 (61%), Gaps = 9/298 (3%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
MF K +++ WNA+++G+ N EA+ LF + E V P + +F ++L A A LA+
Sbjct: 342 MFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAE 401
Query: 74 LKQAMNIHCYLIRSGFLYR------LEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDII 127
L M H ++++ GF ++ + V + L+D+Y KCG + + +F + ++D +
Sbjct: 402 LHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFR--KMMERDCV 459
Query: 128 IWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM 187
W+A+I + ++G+G A+ LF EM++SG KP+ +T VL AC H G V+EG F M
Sbjct: 460 SWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSM 519
Query: 188 LKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 246
+ + PL DHYTC++DLLGRAG L++A ++I MP++P+ +WG+LL AC H N+ L
Sbjct: 520 TRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITL 579
Query: 247 GEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
G+ A E+EP N+G Y+LL+N+YA +G+W DV VR + + G+ K P S +++
Sbjct: 580 GKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKI 637
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 120/216 (55%), Gaps = 9/216 (4%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F ++ WN+++SGF + EA+ F M E + +F S+L A + L D
Sbjct: 108 LFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLND 167
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
+ + + +H + +S FL + + S LVD+YSKCG++ A +F+ + D++++ W+++I
Sbjct: 168 MNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFD--EMGDRNVVSWNSLI 225
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH--- 190
+ ++G A+ +F M++S V+P++VT SV+ AC+ + + G + ++K+
Sbjct: 226 TCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKL 285
Query: 191 -HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK 225
+ I L + + +D+ + R+ +A + +MPI+
Sbjct: 286 RNDIILSNAF---VDMYAKCSRIKEARFIFDSMPIR 318
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 131/271 (48%), Gaps = 37/271 (13%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC N + ++F + + WN++++ F N A EA+ +F+ ML V+PD T
Sbjct: 196 MYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVT 255
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYR-LEVASILVDIYSKCGSLGYAHHIFNII 119
S++ A A L+ +K +H ++++ L + +++ VD+Y+KC + A IF+ +
Sbjct: 256 LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315
Query: 120 PLK-----------------------------DKDIIIWSAIIAAYGKHGHGEMAVSLFN 150
P++ +++++ W+A+IA Y ++G E A+SLF
Sbjct: 316 PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC 375
Query: 151 EMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHY------TCIID 204
+ + V P +F ++L AC+ + + G+ +LKH +ID
Sbjct: 376 LLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLID 435
Query: 205 LLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ + G +++ Y + R M ++ + W A++
Sbjct: 436 MYVKCGCVEEGYLVFRKM-MERDCVSWNAMI 465
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 30/185 (16%)
Query: 80 IHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP------------------- 120
+H +I+SGF + + + L+D YSKCGSL +F+ +P
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 121 ----------LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHA 170
+ ++D W+++++ + +H E A+ F M + G N+ +F SVL A
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 171 CSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAV 230
CS + +++G+ + + K + V + ++D+ + G ++DA + M + N
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDR-NVVS 220
Query: 231 WGALL 235
W +L+
Sbjct: 221 WNSLI 225
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC C Y +F K ++ WNA++ GF N EA++LF++ML +PD+ T
Sbjct: 436 MYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHIT 495
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
+L A +++ + + R G + + +VD+ + G L A + +
Sbjct: 496 MIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM 555
Query: 120 PLKDKDIIIWSAIIAAYGKH 139
P++ D +IW +++AA H
Sbjct: 556 PMQ-PDSVIWGSLLAACKVH 574
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 238 bits (608), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 119/293 (40%), Positives = 178/293 (60%), Gaps = 3/293 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
++F + A W ++ + EA+ LF QM + V+P + S+L A LA
Sbjct: 286 RVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLA 345
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
L+ +H +L+R F + VAS+L+ +Y KCG L A +F+ KDII+W++I
Sbjct: 346 SLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFD--RFSSKDIIMWNSI 403
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM-LKHH 191
I+ Y HG GE A+ +F+EM SG PN+VT ++L ACS+ G ++EGL +F+ M K
Sbjct: 404 ISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFC 463
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
+ P V+HY+C +D+LGRAG++D A LI +M IKP+ VWGALLGAC +H ++L EVAA
Sbjct: 464 VTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAA 523
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
+ FE EP+N G Y+LL+++ A+ +W DV VR + + K P S +EV
Sbjct: 524 KKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEV 576
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 116/276 (42%), Gaps = 55/276 (19%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
N + K F K WN+++SG+ N L +EA QLF +M +V ++N L+ Y
Sbjct: 34 NEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV----VSWNGLVSGY 89
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIII 128
+K M + A ++F ++P +++++
Sbjct: 90 -----IKNRMIVE------------------------------ARNVFELMP--ERNVVS 112
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML 188
W+A++ Y + G A SLF M + N+V++T + G +D+ L+ M
Sbjct: 113 WTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKARKLYDMMP 168
Query: 189 KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGE 248
++ T +I L R GR+D+A + M + N W ++ + V++
Sbjct: 169 VKDVVA----STNMIGGLCREGRVDEARLIFDEMRER-NVVTWTTMITGYRQNNRVDV-- 221
Query: 249 VAARWTFELEPENTG-NYILLANLYAAVGRWRDVEK 283
AR FE+ PE T ++ + Y GR D E+
Sbjct: 222 --ARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEE 255
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 237 bits (605), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 115/305 (37%), Positives = 183/305 (60%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC+C + + K+F + + W A+++G++ + + + +F++ML DV P+ T
Sbjct: 249 MYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKT 308
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+S+L A A + L + +HCY+I++ + L+D+Y KCG L A +F
Sbjct: 309 LSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFE--R 366
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
L +K++ W+A+I + HG+ A LF M+ S V PN+VTF +VL AC+H GLV+EG
Sbjct: 367 LHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEG 426
Query: 181 LSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
LF M + ++ P DHY C++DL GR G L++A LI MP++P + VWGAL G+C+
Sbjct: 427 RRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCL 486
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H++ ELG+ AA +L+P ++G Y LLANLY+ W +V +VR + + + K P
Sbjct: 487 LHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGF 546
Query: 300 SLVEV 304
S +EV
Sbjct: 547 SWIEV 551
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 145/313 (46%), Gaps = 41/313 (13%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y+ + + ++F K W A++ GF+ N A EA+ F +M V + T
Sbjct: 148 YSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTV 207
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLY-RLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A + D++ ++H + +G + + + S LVD+Y KC A +F+ +P
Sbjct: 208 VSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP 267
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++++ W+A+IA Y + + + +F EM++S V PN+ T +SVL AC+HVG + G
Sbjct: 268 --SRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRG 325
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLD--------------------------- 213
+ +M+K+ I T +IDL + G L+
Sbjct: 326 RRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAH 385
Query: 214 ----DAYNLIRTM---PIKPNHAVWGALLGACVSHENVELGE---VAARWTFELEPENTG 263
DA++L TM + PN + A+L AC VE G ++ + F +EP+
Sbjct: 386 GYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPK-AD 444
Query: 264 NYILLANLYAAVG 276
+Y + +L+ G
Sbjct: 445 HYACMVDLFGRKG 457
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 7/204 (3%)
Query: 46 FKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSK 105
++ M V P TF LL A L D H ++++ G V + L+ YS
Sbjct: 92 YRHMRRNGVIPSRHTFPPLLKAVFKLRD-SNPFQFHAHIVKFGLDSDPFVRNSLISGYSS 150
Query: 106 CGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFT 165
G +A +F+ +DKD++ W+A+I + ++G A+ F EM ++GV N++T
Sbjct: 151 SGLFDFASRLFD--GAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVV 208
Query: 166 SVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHY--TCIIDLLGRAGRLDDAYNLIRTMP 223
SVL A V V G S+ L+ + D + + ++D+ G+ DDA + MP
Sbjct: 209 SVLKAAGKVEDVRFGRSVHGLYLETGRVK-CDVFIGSSLVDMYGKCSCYDDAQKVFDEMP 267
Query: 224 IKPNHAVWGALLGACVSHENVELG 247
+ N W AL+ V + G
Sbjct: 268 SR-NVVTWTALIAGYVQSRCFDKG 290
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 237 bits (604), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 122/316 (38%), Positives = 189/316 (59%), Gaps = 15/316 (4%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED------- 53
MY++ +++ ++F K + WN +++G++ + +A+ L +M +
Sbjct: 449 MYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGA 508
Query: 54 ----VQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSL 109
++P++ T ++LP+ A L+ L + IH Y I++ + V S LVD+Y+KCG L
Sbjct: 509 SRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCL 568
Query: 110 GYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLH 169
+ +F+ IP K++I W+ II AYG HG+G+ A+ L M+ GVKPN+VTF SV
Sbjct: 569 QMSRKVFDQIP--QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFA 626
Query: 170 ACSHVGLVDEGLSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNH 228
ACSH G+VDEGL +F M + + P DHY C++DLLGRAGR+ +AY L+ MP N
Sbjct: 627 ACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNK 686
Query: 229 A-VWGALLGACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDM 287
A W +LLGA H N+E+GE+AA+ +LEP +Y+LLAN+Y++ G W +VR
Sbjct: 687 AGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRN 746
Query: 288 VNEVGLRKLPAQSLVE 303
+ E G+RK P S +E
Sbjct: 747 MKEQGVRKEPGCSWIE 762
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 5/222 (2%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
WN VLS N EA++ ++M++E V+PD T +S+LPA + L L+ +H Y +
Sbjct: 270 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL 329
Query: 86 RSGFLYRLE-VASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEM 144
++G L V S LVD+Y C + +F+ + D+ I +W+A+IA Y ++ H +
Sbjct: 330 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD--GMFDRKIGLWNAMIAGYSQNEHDKE 387
Query: 145 AVSLFNEMVQS-GVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
A+ LF M +S G+ N T V+ AC G ++ F++K + ++
Sbjct: 388 ALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLM 447
Query: 204 DLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 245
D+ R G++D A + M + + W ++ V E+ E
Sbjct: 448 DMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMITGYVFSEHHE 488
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 91/157 (57%), Gaps = 4/157 (2%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
W +L + ++L REA+ + M+V ++PDN F +LL A A L D++ IH ++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 86 RSGF-LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEM 144
+ G+ + + VA+ LV++Y KCG G + +F+ I +++ + W+++I++ EM
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRI--SERNQVSWNSLISSLCSFEKWEM 182
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
A+ F M+ V+P+ T SV+ ACS++ + EGL
Sbjct: 183 ALEAFRCMLDENVEPSSFTLVSVVTACSNLPM-PEGL 218
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 98/193 (50%), Gaps = 6/193 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y KC YK+F + S++ WN+++S A++ F+ ML E+V+P + T
Sbjct: 142 LYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFT 201
Query: 61 FNSLLPAYAILA---DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
S++ A + L L +H Y +R G L + + LV +Y K G L + +
Sbjct: 202 LVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF-IINTLVAMYGKLGKLASSKVLLG 260
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLV 177
+D++ W+ ++++ ++ A+ EMV GV+P++ T +SVL ACSH+ ++
Sbjct: 261 --SFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEML 318
Query: 178 DEGLSLFQFMLKH 190
G L + LK+
Sbjct: 319 RTGKELHAYALKN 331
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 121/253 (47%), Gaps = 17/253 (6%)
Query: 5 CNCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNATF 61
CNC + ++F ++ WNA+++G+ N +EA+ LF M + ++ T
Sbjct: 349 CNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTM 408
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
++PA + IH ++++ G V + L+D+YS+ G + A IF +
Sbjct: 409 AGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFG--KM 466
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEM------VQSG-----VKPNQVTFTSVLHA 170
+D+D++ W+ +I Y H E A+ L ++M V G +KPN +T ++L +
Sbjct: 467 EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPS 526
Query: 171 CSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAV 230
C+ + + +G + + +K+++ V + ++D+ + G L + + +P K N
Sbjct: 527 CAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVIT 585
Query: 231 WGALLGACVSHEN 243
W ++ A H N
Sbjct: 586 WNVIIMAYGMHGN 598
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 236 bits (603), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/306 (39%), Positives = 179/306 (58%), Gaps = 5/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + +F S+K WN+++SGF N EA+ LF +M E V P+ T
Sbjct: 386 MYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVT 445
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFL--YRLEVASILVDIYSKCGSLGYAHHIFNI 118
SL A A L L ++H Y ++ GFL + V + L+D Y+KCG A IF+
Sbjct: 446 VASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDT 505
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
I ++K+ I WSA+I YGK G ++ LF EM++ KPN+ TFTS+L AC H G+V+
Sbjct: 506 I--EEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVN 563
Query: 179 EGLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
EG F M K ++ P HYTC++D+L RAG L+ A ++I MPI+P+ +GA L
Sbjct: 564 EGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHG 623
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
C H +LGE+ + +L P++ Y+L++NLYA+ GRW ++VR+++ + GL K+
Sbjct: 624 CGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIA 683
Query: 298 AQSLVE 303
S +E
Sbjct: 684 GHSTME 689
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 123/239 (51%), Gaps = 6/239 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + + ++F + S W A++ G+ HN EA+ LF++M +++P+ T
Sbjct: 286 MYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVT 345
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L ++ +L+ ++H I+ G ++ VA+ LV +Y+KC A ++F +
Sbjct: 346 IASVLSGCGLIENLELGRSVHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKYVFEM-- 402
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+KDI+ W++II+ + ++G A+ LF+ M V PN VT S+ AC+ +G + G
Sbjct: 403 ESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVG 462
Query: 181 LSLFQFMLKHHIIPLVDHY--TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
SL + +K + + T ++D + G A + T+ K N W A++G
Sbjct: 463 SSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEK-NTITWSAMIGG 520
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 2/189 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC ++K+F + + W ++++G++ N L E + LF +M +V + T
Sbjct: 185 MYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYT 244
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ +L+ A L+ L Q H L++SG + + L+D+Y KCG + A +FN
Sbjct: 245 YGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFN--E 302
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
D+++W+A+I Y +G A+SLF +M +KPN VT SVL C + ++ G
Sbjct: 303 HSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELG 362
Query: 181 LSLFQFMLK 189
S+ +K
Sbjct: 363 RSVHGLSIK 371
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 140/300 (46%), Gaps = 39/300 (13%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
W +L + N + E ++L+ ++ + D+ F+ L A L DL IHC L+
Sbjct: 110 WKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLV 169
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+ + V + L+D+Y+KCG + AH +FN I L++ ++ W+++IA Y K+ E
Sbjct: 170 KVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRN--VVCWTSMIAGYVKNDLCEEG 226
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACS-----------HVGLVDEGLSLFQFML------ 188
+ LFN M ++ V N+ T+ +++ AC+ H LV G+ L ++
Sbjct: 227 LVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDM 286
Query: 189 ---------------KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP---IKPNHAV 230
+H + LV +T +I G +++A +L + M IKPN
Sbjct: 287 YVKCGDISNARRVFNEHSHVDLV-MWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVT 345
Query: 231 WGALLGACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNE 290
++L C EN+ELG + ++ +T L ++YA + RD + V +M +E
Sbjct: 346 IASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESE 405
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 96/206 (46%), Gaps = 11/206 (5%)
Query: 49 MLVEDVQPDNATFNSLLPAYAILA---DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSK 105
+L E+ + + + P + +L+ ++ H L +G + + +A+ LV +Y
Sbjct: 29 ILTEENDGSSLHYAASSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGF 88
Query: 106 CGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFT 165
G A +F+ IP + D +W ++ Y + V L++ +++ G + + + F+
Sbjct: 89 FGYTKDARLVFDQIP--EPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFS 146
Query: 166 SVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDH--YTCIIDLLGRAGRLDDAYNLIRTMP 223
L AC+ + +D G + ++K +P D+ T ++D+ + G + A+ + +
Sbjct: 147 KALKACTELQDLDNGKKIHCQLVK---VPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDIT 203
Query: 224 IKPNHAVWGALLGACVSHENVELGEV 249
++ N W +++ V ++ E G V
Sbjct: 204 LR-NVVCWTSMIAGYVKNDLCEEGLV 228
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 235 bits (599), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 183/306 (59%), Gaps = 7/306 (2%)
Query: 2 YAKCNCGNLSYKMFMKTSKKR-TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
Y KC + K+F + +++R WN+++SG+IHN L +A+ L ML + D+
Sbjct: 562 YGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFM 621
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ ++L A+A +A L++ M +H +R+ + V S LVD+YSKCG L YA FN +P
Sbjct: 622 YATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMP 681
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG-VKPNQVTFTSVLHACSHVGLVDE 179
+++ W+++I+ Y +HG GE A+ LF M G P+ VTF VL ACSH GL++E
Sbjct: 682 VRNS--YSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEE 739
Query: 180 GLSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G F+ M + + P ++H++C+ D+LGRAG LD + I MP+KPN +W +LGAC
Sbjct: 740 GFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGAC 799
Query: 239 --VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKL 296
+ ELG+ AA F+LEPEN NY+LL N+YAA GRW D+ K R + + ++K
Sbjct: 800 CRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKE 859
Query: 297 PAQSLV 302
S V
Sbjct: 860 AGYSWV 865
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 116/243 (47%), Gaps = 3/243 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + ++F + K + WN++++G N EA++ +K M D+ P + T
Sbjct: 358 MYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFT 417
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S L + A L K IH ++ G + V++ L+ +Y++ G L IF+ +P
Sbjct: 418 LISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP 477
Query: 121 LKDKDIIIWSAIIAAYGKHGHG-EMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+ D + W++II A + AV F ++G K N++TF+SVL A S + +
Sbjct: 478 --EHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGEL 535
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
G + LK++I +I G+ G +D + M + ++ W +++ +
Sbjct: 536 GKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYI 595
Query: 240 SHE 242
+E
Sbjct: 596 HNE 598
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 113/245 (46%), Gaps = 15/245 (6%)
Query: 1 MYAKCNCGNLSYKM--FMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
MY KC G++ Y + F K + WN+++S + R A ++F M + +P
Sbjct: 148 MYWKC-IGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTE 206
Query: 59 ATFNSLLPAYAILA--DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 116
TF SL+ L D++ I C + +SG L L V S LV ++K GSL YA +F
Sbjct: 207 YTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVF 266
Query: 117 NIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGL 176
N ++ ++ + + ++ + GE A LF +M S + + ++ +L + L
Sbjct: 267 N--QMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSSFPEYSL 323
Query: 177 VDE-GLSLFQFMLKHHIIP-LVDHYTCI----IDLLGRAGRLDDAYNLIRTMPIKPNHAV 230
+E GL + + H I LVD I +++ + G + DA + M K +
Sbjct: 324 AEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDK-DSVS 382
Query: 231 WGALL 235
W +++
Sbjct: 383 WNSMI 387
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 6/164 (3%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F + + W ++SG+ N +EA+ + M+ E + + F S+L A +
Sbjct: 57 KVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIG 116
Query: 73 DLKQ--AMNIHCYLIRSGFLYRLEVASILVDIYSKC-GSLGYAHHIFNIIPLKDKDIIIW 129
+ IH + + + V+++L+ +Y KC GS+GYA F I +K+ + W
Sbjct: 117 SVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNS--VSW 174
Query: 130 SAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTS-VLHACS 172
++II+ Y + G A +F+ M G +P + TF S V ACS
Sbjct: 175 NSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS 218
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNA 59
MY+KC + + + F + + WN+++SG+ + EA++LF+ M ++ PD+
Sbjct: 663 MYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHV 722
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
TF +L A + L++ + S G R+E S + D+ + G L
Sbjct: 723 TFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEK 782
Query: 119 IPLKDKDIIIWSAIIAA 135
+P+K +++IW ++ A
Sbjct: 783 MPMK-PNVLIWRTVLGA 798
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 99 LVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVK 158
L++ Y + G A +F+ +PL++ + W+ I++ Y ++G + A+ +MV+ G+
Sbjct: 42 LINAYLETGDSVSARKVFDEMPLRN--CVSWACIVSGYSRNGEHKEALVFLRDMVKEGIF 99
Query: 159 PNQVTFTSVLHACSHVGLV 177
NQ F SVL AC +G V
Sbjct: 100 SNQYAFVSVLRACQEIGSV 118
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 234 bits (598), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 180/304 (59%), Gaps = 2/304 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y+ C C S +F + K WN++ +G++ S EA+ LF ++ + +PD T
Sbjct: 498 VYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFT 557
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F +++ A LA ++ HC L++ G + + L+D+Y+KCGS AH F+
Sbjct: 558 FANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFD--S 615
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+D++ W+++I++Y HG G+ A+ + +M+ G++PN +TF VL ACSH GLV++G
Sbjct: 616 AASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDG 675
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
L F+ ML+ I P +HY C++ LLGRAGRL+ A LI MP KP VW +LL C
Sbjct: 676 LKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAK 735
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
NVEL E AA +P+++G++ +L+N+YA+ G W + +KVR+ + G+ K P +S
Sbjct: 736 AGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRS 795
Query: 301 LVEV 304
+ +
Sbjct: 796 WIGI 799
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 115/212 (54%), Gaps = 8/212 (3%)
Query: 8 GNLSYK--MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLL 65
GN+ Y +F +K T W ++SG + + ++QLF Q++ ++V PD +++L
Sbjct: 197 GNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVL 256
Query: 66 PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKD 125
A +IL L+ IH +++R G + ++L+D Y KCG + AH +FN +P +K+
Sbjct: 257 SACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP--NKN 314
Query: 126 IIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQ 185
II W+ +++ Y ++ + A+ LF M + G+KP+ +S+L +C+ + + G +
Sbjct: 315 IISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHA 374
Query: 186 FMLKHHIIPLVDHYTC--IIDLLGRAGRLDDA 215
+ +K ++ D Y +ID+ + L DA
Sbjct: 375 YTIKANLGN--DSYVTNSLIDMYAKCDCLTDA 404
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 149/332 (44%), Gaps = 49/332 (14%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLA---REAIQLFKQMLVEDVQPD 57
MYAKC+C + K+F + +NA++ G+ EA+ +F+ M ++P
Sbjct: 394 MYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPS 453
Query: 58 NATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
TF SLL A A L L + IH + + G + S L+D+YS C L + +F+
Sbjct: 454 LLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFD 513
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLV 177
+K KD++IW+++ A Y + E A++LF E+ S +P++ TF +++ A ++ V
Sbjct: 514 --EMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASV 571
Query: 178 DEGLSLFQFMLKHHII--PLVDHYTCIIDLLGRAGRLDDAYNLIRTMP------------ 223
G +LK + P + + ++D+ + G +DA+ +
Sbjct: 572 QLGQEFHCQLLKRGLECNPYITN--ALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVIS 629
Query: 224 ----------------------IKPNHAVWGALLGACVSHENVELG--EVAARWTFELEP 259
I+PN+ + +L AC VE G + F +EP
Sbjct: 630 SYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEP 689
Query: 260 ENTGNYILLANLYAAVGRWRDVEKVRDMVNEV 291
E T +Y+ + +L GR + K R+++ ++
Sbjct: 690 E-TEHYVCMVSLLGRAGR---LNKARELIEKM 717
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 132/285 (46%), Gaps = 10/285 (3%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y KC ++K+F K W +LSG+ N+L +EA++LF M ++PD
Sbjct: 294 YVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYAC 353
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+S+L + A L L +H Y I++ V + L+D+Y+KC L A +F+I
Sbjct: 354 SSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAA 413
Query: 122 KDKDIIIWSAIIAAYGKHG-HGEM--AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
D+++++A+I Y + G E+ A+++F +M ++P+ +TF S+L A + + +
Sbjct: 414 --ADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLG 471
Query: 179 EGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
+ M K+ + + + +ID+ L D+ + M +K + +W ++
Sbjct: 472 LSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFAGY 530
Query: 239 VSHENVELGEVAARWTFELE-PENTGNYILLANLYAAVGRWRDVE 282
V E A EL+ + AN+ A G V+
Sbjct: 531 VQQSE---NEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQ 572
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 130/267 (48%), Gaps = 12/267 (4%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQML-VEDVQPDNA 59
+Y++ + K+F K ++ W+ ++S H+ + E++ +F + P+
Sbjct: 88 LYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEY 147
Query: 60 TFNSLLPAYAILADLKQAM--NIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
+S + A + L + M + +L++SGF + V ++L+D Y K G++ YA +F+
Sbjct: 148 ILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFD 207
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLV 177
+P +K + W+ +I+ K G +++ LF ++++ V P+ ++VL ACS + +
Sbjct: 208 ALP--EKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFL 265
Query: 178 DEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+ G + +L++ + +ID + GR+ A+ L MP K N W LL
Sbjct: 266 EGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNK-NIISWTTLLSG 324
Query: 238 ----CVSHENVELGEVAARWTFELEPE 260
+ E +EL ++ F L+P+
Sbjct: 325 YKQNALHKEAMELFTSMSK--FGLKPD 349
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 81/165 (49%), Gaps = 10/165 (6%)
Query: 80 IHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKH 139
+H +I G +++IL+++YS+ G + YA +F +P +++++ WS +++A H
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP--ERNLVSWSTMVSACNHH 123
Query: 140 GHGEMAVSLFNEMVQSGV-KPNQVTFTSVLHACSHVGLVDEG----LSLFQFMLKHHIIP 194
G E ++ +F E ++ PN+ +S + ACS GL G L F++K
Sbjct: 124 GIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGRWMVFQLQSFLVKSGFDR 181
Query: 195 LVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
V T +ID + G +D A + +P K W ++ CV
Sbjct: 182 DVYVGTLLIDFYLKDGNIDYARLVFDALPEKST-VTWTTMISGCV 225
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 181/305 (59%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC C + + +F K +K W +++ + +S RE LF +++ +P+ T
Sbjct: 262 MYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYT 321
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F +L A A L + +H Y+ R GF +S LVD+Y+KCG++ A H+ + P
Sbjct: 322 FAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP 381
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
D++ W+++I ++G + A+ F+ +++SG KP+ VTF +VL AC+H GLV++G
Sbjct: 382 --KPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKG 439
Query: 181 LSLF-QFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
L F KH + DHYTC++DLL R+GR + ++I MP+KP+ +W ++LG C
Sbjct: 440 LEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCS 499
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
++ N++L E AA+ F++EPEN Y+ +AN+YAA G+W + K+R + E+G+ K P
Sbjct: 500 TYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGS 559
Query: 300 SLVEV 304
S E+
Sbjct: 560 SWTEI 564
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 146/315 (46%), Gaps = 37/315 (11%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDV------ 54
MYAKC + K+F + + WN +++G+ L EA +LF +M +D
Sbjct: 129 MYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAM 188
Query: 55 --------QPDNA------------------TFNSLLPAYAILADLKQAMNIHCYLIRSG 88
QP+ A T + + A A + +++ IH +++R+G
Sbjct: 189 VTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAG 248
Query: 89 FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSL 148
+ S L+D+Y KCG + A +IF+ I +KD++ W+++I Y K SL
Sbjct: 249 LDSDEVLWSSLMDMYGKCGCIDEARNIFDKIV--EKDVVSWTSMIDRYFKSSRWREGFSL 306
Query: 149 FNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGR 208
F+E+V S +PN+ TF VL+AC+ + + G + +M + P + ++D+ +
Sbjct: 307 FSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTK 366
Query: 209 AGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYILL 268
G ++ A +++ P KP+ W +L+G C +N + E + L+ +++
Sbjct: 367 CGNIESAKHVVDGCP-KPDLVSWTSLIGGCA--QNGQPDEALKYFDLLLKSGTKPDHVTF 423
Query: 269 ANLYAAVGRWRDVEK 283
N+ +A VEK
Sbjct: 424 VNVLSACTHAGLVEK 438
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 80/154 (51%), Gaps = 10/154 (6%)
Query: 36 NSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEV 95
L REA+QL + +P +T+ +L+ + L++ +H ++ SGF+ + +
Sbjct: 67 QKLLREAVQLLGRA----KKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVI 122
Query: 96 ASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS 155
+ L+ +Y+KCGSL A +F+ +P ++D+ W+ ++ Y + G E A LF+EM +
Sbjct: 123 WNRLLRMYAKCGSLVDARKVFDEMP--NRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK 180
Query: 156 GVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK 189
+ ++T+++ +E L L+ M +
Sbjct: 181 ----DSYSWTAMVTGYVKKDQPEEALVLYSLMQR 210
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 232 bits (592), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/304 (36%), Positives = 182/304 (59%), Gaps = 3/304 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY +C + +F + ++K WN++++ ++ N A++LF+++ + PD+ T
Sbjct: 374 MYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTT 433
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+LPAYA L + IH Y+++S + + + LV +Y+ CG L A FN I
Sbjct: 434 IASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHIL 493
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
LKD ++ W++II AY HG G ++V LF+EM+ S V PN+ TF S+L ACS G+VDEG
Sbjct: 494 LKD--VVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEG 551
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F+ M + + I P ++HY C++DL+GR G A + MP P +WG+LL A
Sbjct: 552 WEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASR 611
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
+H+++ + E AA F++E +NTG Y+LL N+YA GRW DV +++ ++ G+ + ++
Sbjct: 612 NHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSR 671
Query: 300 SLVE 303
S VE
Sbjct: 672 STVE 675
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 116/225 (51%), Gaps = 4/225 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
++F + +K WN ++ GF L EA+Q + +M+ V+ D T+ ++ + A ++
Sbjct: 85 QLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGIS 144
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
L++ IH +I+ GF+ + V + L+ +Y K G A +F +P ++DI+ W+++
Sbjct: 145 SLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP--ERDIVSWNSM 202
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
I+ Y G G ++ LF EM++ G KP++ + S L ACSHV G + ++ I
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262
Query: 193 -IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG 236
V T I+D+ + G + A + M I+ N W ++G
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMIG 306
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 136/270 (50%), Gaps = 19/270 (7%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y K C + K+F + ++ WN+++SG++ ++ LFK+ML +PD +
Sbjct: 174 LYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFS 233
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILV-----DIYSKCGSLGYAHHI 115
S L A + + K IHC+ +RS R+E ++V D+YSK G + YA I
Sbjct: 234 TMSALGACSHVYSPKMGKEIHCHAVRS----RIETGDVMVMTSILDMYSKYGEVSYAERI 289
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMV-QSGVKPNQVTFTSVLHACSHV 174
FN + ++I+ W+ +I Y ++G A F +M Q+G++P+ +T ++L A +
Sbjct: 290 FN--GMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA-- 345
Query: 175 GLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGAL 234
+ EG ++ + ++ +P + T +ID+ G G+L A + M K N W ++
Sbjct: 346 --ILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEK-NVISWNSI 402
Query: 235 LGACVSH-ENVELGEVAAR-WTFELEPENT 262
+ A V + +N E+ W L P++T
Sbjct: 403 IAAYVQNGKNYSALELFQELWDSSLVPDST 432
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 232 bits (591), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/306 (38%), Positives = 184/306 (60%), Gaps = 5/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAK + ++F ++ A+++G+ L EA+++F ++ E + P+ T
Sbjct: 197 MYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVT 256
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ SLL A + LA L HC+++R + + + L+D+YSKCG+L YA +F+ +P
Sbjct: 257 YASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMP 316
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMV-QSGVKPNQVTFTSVLHACSHVGLVDE 179
++ I W+A++ Y KHG G + LF M + VKP+ VT +VL CSH + D
Sbjct: 317 --ERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDT 374
Query: 180 GLSLFQFML--KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
GL++F M+ ++ P +HY CI+D+LGRAGR+D+A+ I+ MP KP V G+LLGA
Sbjct: 375 GLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGA 434
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
C H +V++GE R E+EPEN GNY++L+NLYA+ GRW DV VR M+ + + K P
Sbjct: 435 CRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEP 494
Query: 298 AQSLVE 303
+S ++
Sbjct: 495 GRSWIQ 500
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 118/234 (50%), Gaps = 3/234 (1%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y KC+C + K+ + +K W A++S + + EA+ +F +M+ D +P+ TF
Sbjct: 97 YGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTF 156
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
++L + + L IH +++ + + V S L+D+Y+K G + A IF +P
Sbjct: 157 ATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP- 215
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
++D++ +AIIA Y + G E A+ +F+ + G+ PN VT+ S+L A S + L+D G
Sbjct: 216 -ERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGK 274
Query: 182 SLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+L+ + +ID+ + G L A L MP + W A+L
Sbjct: 275 QAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPER-TAISWNAML 327
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 109/216 (50%), Gaps = 7/216 (3%)
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+++LL A L+ +H ++I++ +L + + L+ Y KC L A + + +P
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+K+++ W+A+I+ Y + GH A+++F EM++S KPN+ TF +VL +C + G
Sbjct: 115 --EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLG 172
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ ++K + + + ++D+ +AG++ +A + +P + + + G
Sbjct: 173 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAG---- 228
Query: 241 HENVELGEVAARWTFELEPEN-TGNYILLANLYAAV 275
+ + L E A L E + NY+ A+L A+
Sbjct: 229 YAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTAL 264
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 231 bits (590), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 114/305 (37%), Positives = 178/305 (58%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC S K+F T WN V+S + +Q+ QM +V PD AT
Sbjct: 452 MYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMAT 511
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F LP A LA + IHC L+R G+ L++ + L+++YSKCG L + +F
Sbjct: 512 FLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFE--R 569
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ +D++ W+ +I AYG +G GE A+ F +M +SG+ P+ V F ++++ACSH GLVDEG
Sbjct: 570 MSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEG 629
Query: 181 LSLFQFMLKHHII-PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
L+ F+ M H+ I P+++HY C++DLL R+ ++ A I+ MPIKP+ ++W ++L AC
Sbjct: 630 LACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACR 689
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
+ ++E E +R EL P++ G IL +N YAA+ +W V +R + + + K P
Sbjct: 690 TSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGY 749
Query: 300 SLVEV 304
S +EV
Sbjct: 750 SWIEV 754
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 140/275 (50%), Gaps = 12/275 (4%)
Query: 21 KRTAP------WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADL 74
+R +P WN+++ F N L EA++ + ++ V PD TF S++ A A L D
Sbjct: 63 RRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDA 122
Query: 75 KQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIA 134
+ ++ ++ GF L V + LVD+YS+ G L A +F+ +P+ +D++ W+++I+
Sbjct: 123 EMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPV--RDLVSWNSLIS 180
Query: 135 AYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIP 194
Y HG+ E A+ +++E+ S + P+ T +SVL A ++ +V +G L F LK +
Sbjct: 181 GYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNS 240
Query: 195 LVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWT 254
+V ++ + + R DA + M ++ + + + G + +E+ E + R
Sbjct: 241 VVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICG----YLKLEMVEESVRMF 296
Query: 255 FELEPENTGNYILLANLYAAVGRWRDVEKVRDMVN 289
E + + + ++++ A G RD+ + + N
Sbjct: 297 LENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYN 331
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 118/237 (49%), Gaps = 3/237 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YAKC + +F K T WN+++SG+I + EA++LFK M++ + Q D+ T
Sbjct: 351 VYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHIT 410
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ L+ LADLK +H I+SG L V++ L+D+Y+KCG +G + IF+
Sbjct: 411 YLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFS--S 468
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ D + W+ +I+A + G + + +M +S V P+ TF L C+ + G
Sbjct: 469 MGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLG 528
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+ +L+ + +I++ + G L+++ + M + + W ++ A
Sbjct: 529 KEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMIYA 584
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 124/247 (50%), Gaps = 4/247 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY K + ++F + + + +N ++ G++ + E++++F + L + +PD T
Sbjct: 251 MYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLT 309
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+S+L A L DL A I+ Y++++GF+ V +IL+D+Y+KCG + A +FN
Sbjct: 310 VSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN--S 367
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++ KD + W++II+ Y + G A+ LF M+ + + +T+ ++ + + + G
Sbjct: 368 MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG 427
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
L +K I + +ID+ + G + D+ + +M + W ++ ACV
Sbjct: 428 KGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG-DTVTWNTVISACVR 486
Query: 241 HENVELG 247
+ G
Sbjct: 487 FGDFATG 493
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 137/282 (48%), Gaps = 6/282 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY++ + ++F + + WN+++SG+ + EA++++ ++ + PD+ T
Sbjct: 150 MYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFT 209
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+S+LPA+ L +KQ +H + ++SG + V + LV +Y K A +F+ +
Sbjct: 210 VSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMD 269
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++D + ++ +I Y K E +V +F E + KP+ +T +SVL AC H+ +
Sbjct: 270 VRDS--VSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLA 326
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
++ +MLK + +ID+ + G + A ++ +M K + W +++ +
Sbjct: 327 KYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK-DTVSWNSIISGYI- 384
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVE 282
++ +L E + + E ++I L + R D++
Sbjct: 385 -QSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLK 425
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 231 bits (589), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 115/306 (37%), Positives = 181/306 (59%), Gaps = 4/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + +F ++ T W A++SG++ L ++LF +M +++ D +T
Sbjct: 395 MYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQST 454
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F ++L A A A L +H ++IRSG L + S LVD+Y+KCGS+ A +F +P
Sbjct: 455 FATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP 514
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
D++ + W+A+I+A+ +G GE A+ F +M++SG++P+ V+ VL ACSH G V++G
Sbjct: 515 --DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQG 572
Query: 181 LSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
FQ M + I P HY C++DLLGR GR +A L+ MP +P+ +W ++L AC
Sbjct: 573 TEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACR 632
Query: 240 SHENVELGEVAARWTFELEP-ENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H+N L E AA F +E + Y+ ++N+YAA G W V V+ + E G++K+PA
Sbjct: 633 IHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPA 692
Query: 299 QSLVEV 304
S VEV
Sbjct: 693 YSWVEV 698
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 8/172 (4%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED--VQPDNATFNSLLPAYAIL 71
+F + W ++ + NS EA +LF+QM PD+ TF +LLP
Sbjct: 101 LFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDA 160
Query: 72 ADLKQAMNIHCYLIRSGFLYR--LEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIW 129
+H + ++ GF L V+++L+ Y + L A +F IP +KD + +
Sbjct: 161 VPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP--EKDSVTF 218
Query: 130 SAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
+ +I Y K G ++ LF +M QSG +P+ TF+ VL A VGL D L
Sbjct: 219 NTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV--VGLHDFAL 268
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 106/231 (45%), Gaps = 3/231 (1%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
+L+ +F + +K + +N +++G+ + L E+I LF +M QP + TF+ +L A
Sbjct: 201 DLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV 260
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIII 128
L D +H + +GF V + ++D YSK + +F+ +P + D +
Sbjct: 261 VGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP--ELDFVS 318
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML 188
++ +I++Y + E ++ F EM G F ++L +++ + G L L
Sbjct: 319 YNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL 378
Query: 189 KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
++ ++D+ + ++A + +++P + W AL+ V
Sbjct: 379 LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTT-VSWTALISGYV 428
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 231 bits (589), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 118/287 (41%), Positives = 174/287 (60%), Gaps = 4/287 (1%)
Query: 20 KKRTAPWNAVLSGFIHNSLAREAIQLFKQM-LVEDVQPDNATFNSLLPAYAILADLKQAM 78
+K WNA++S + N EA+ +F ++ L ++++ + T S L A A + L+
Sbjct: 326 QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR 385
Query: 79 NIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGK 138
IH Y+ + G V S L+ +YSKCG L + +FN + + +D+ +WSA+I
Sbjct: 386 WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV--EKRDVFVWSAMIGGLAM 443
Query: 139 HGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH-IIPLVD 197
HG G AV +F +M ++ VKPN VTFT+V ACSH GLVDE SLF M ++ I+P
Sbjct: 444 HGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEK 503
Query: 198 HYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFEL 257
HY CI+D+LGR+G L+ A I MPI P+ +VWGALLGAC H N+ L E+A EL
Sbjct: 504 HYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLEL 563
Query: 258 EPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
EP N G ++LL+N+YA +G+W +V ++R + GL+K P S +E+
Sbjct: 564 EPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEI 610
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 156/319 (48%), Gaps = 37/319 (11%)
Query: 6 NCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNS 63
+CG+L + K+F +K WN++++GF+ +A++LFK+M EDV+ + T
Sbjct: 178 SCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVG 237
Query: 64 LLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD 123
+L A A + +L+ + Y+ + L +A+ ++D+Y+KCGS+ A +F+ + KD
Sbjct: 238 VLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKD 297
Query: 124 -----------------------------KDIIIWSAIIAAYGKHGHGEMAVSLFNEM-V 153
KDI+ W+A+I+AY ++G A+ +F+E+ +
Sbjct: 298 NVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQL 357
Query: 154 QSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLD 213
Q +K NQ+T S L AC+ VG ++ G + ++ KH I + +I + + G L+
Sbjct: 358 QKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLE 417
Query: 214 DAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTG-NYILLANLY 272
+ + ++ K + VW A++G H G A ++++ N N + N++
Sbjct: 418 KSREVFNSVE-KRDVFVWSAMIGGLAMH---GCGNEAVDMFYKMQEANVKPNGVTFTNVF 473
Query: 273 AAVGRWRDVEKVRDMVNEV 291
A V++ + +++
Sbjct: 474 CACSHTGLVDEAESLFHQM 492
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 115/249 (46%), Gaps = 8/249 (3%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNATFNSLLPAYAIL 71
K+F + K + WN ++ + +I F M+ E P+ TF L+ A A +
Sbjct: 85 KVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEV 144
Query: 72 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
+ L ++H ++S + VA+ L+ Y CG L A +F I K+KD++ W++
Sbjct: 145 SSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI--KEKDVVSWNS 202
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH 191
+I + + G + A+ LF +M VK + VT VL AC+ + ++ G + ++ ++
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR 262
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
+ + ++D+ + G ++DA L M K N W +L E+ E AA
Sbjct: 263 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDN-VTWTTMLDGYAISEDYE----AA 317
Query: 252 RWTFELEPE 260
R P+
Sbjct: 318 REVLNSMPQ 326
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 71/156 (45%), Gaps = 5/156 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC S ++F K+ W+A++ G + EA+ +F +M +V+P+ T
Sbjct: 409 MYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVT 468
Query: 61 FNSLLPAYAILADLKQAMNI-HCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F ++ A + + +A ++ H G + + + +VD+ + G L A +
Sbjct: 469 FTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAM 528
Query: 120 PLKDKDIIIWSAIIAAYGKHGH---GEMAVSLFNEM 152
P+ +W A++ A H + EMA + E+
Sbjct: 529 PIP-PSTSVWGALLGACKIHANLNLAEMACTRLLEL 563
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/309 (37%), Positives = 186/309 (60%), Gaps = 10/309 (3%)
Query: 1 MYAKCN----CGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQP 56
MY C+ C NL ++ F + + WN +L+ + + E ++LFK MLV + +P
Sbjct: 415 MYTFCSDLYCCFNL-FEDFRNNAD--SVSWNTILTACLQHEQPVEMLRLFKLMLVSECEP 471
Query: 57 DNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 116
D+ T +LL ++ LK +HCY +++G + + L+D+Y+KCGSLG A IF
Sbjct: 472 DHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIF 531
Query: 117 NIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGL 176
+ + ++D++ WS +I Y + G GE A+ LF EM +G++PN VTF VL ACSHVGL
Sbjct: 532 D--SMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGL 589
Query: 177 VDEGLSLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
V+EGL L+ M +H I P +H +C++DLL RAGRL++A I M ++P+ VW LL
Sbjct: 590 VEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLL 649
Query: 236 GACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRK 295
AC + NV L + AA +++P N+ ++LL +++A+ G W + +R + + ++K
Sbjct: 650 SACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKK 709
Query: 296 LPAQSLVEV 304
+P QS +E+
Sbjct: 710 IPGQSWIEI 718
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 107/222 (48%), Gaps = 1/222 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYA+C N + ++F + + TA WN +++G +N A EA+ +F QM PD +
Sbjct: 314 MYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAIS 373
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
SLL A L Q M IH Y+I+ GFL L V + L+ +Y+ C L ++F
Sbjct: 374 LRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFR 433
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ D + W+ I+ A +H + LF M+ S +P+ +T ++L C + + G
Sbjct: 434 -NNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLG 492
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM 222
+ + LK + P +ID+ + G L A + +M
Sbjct: 493 SQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSM 534
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 114/238 (47%), Gaps = 4/238 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + ++F ++ + +V++G+ N EAI+L+ +ML ED+ PD
Sbjct: 111 MYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFA 170
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S++ A A +D+ +H +I+ L + L+ +Y + + A +F IP
Sbjct: 171 FGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIP 230
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGV-KPNQVTFTSVLHACSHVGLVDE 179
+ KD+I WS+IIA + + G A+S EM+ GV PN+ F S L ACS + D
Sbjct: 231 M--KDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDY 288
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
G + +K + + D+ R G L+ A + + +P+ A W ++
Sbjct: 289 GSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE-RPDTASWNVIIAG 345
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 130/307 (42%), Gaps = 55/307 (17%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFN-------SLLPAYAILADLKQAMN 79
N ++ ++ REA++ F D N++F SL+ A + L Q
Sbjct: 35 NDHINSLCKSNFYREALEAF------DFAQKNSSFKIRLRTYISLICACSSSRSLAQGRK 88
Query: 80 IHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKH 139
IH +++ S Y + + ++ +Y KCGSL A +F+ +P +++++ ++++I Y ++
Sbjct: 89 IHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMP--ERNLVSYTSVITGYSQN 146
Query: 140 GHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHY 199
G G A+ L+ +M+Q + P+Q F S++ AC+ V G L ++K +
Sbjct: 147 GQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQ 206
Query: 200 TCIIDLLGRAGRLDDAYNLIRTMPIK---------------------------------- 225
+I + R ++ DA + +P+K
Sbjct: 207 NALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVF 266
Query: 226 -PNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYIL---LANLYAAVGRWRDV 281
PN ++G+ L AC S + G + ++ E GN I L ++YA G
Sbjct: 267 HPNEYIFGSSLKACSSLLRPDYG--SQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSA 324
Query: 282 EKVRDMV 288
+V D +
Sbjct: 325 RRVFDQI 331
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 229 bits (585), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 182/305 (59%), Gaps = 6/305 (1%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YA+ + ++F K W A+++GF N+ +EA++ F +M ++ D T
Sbjct: 225 YARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTV 284
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYR--LEVASILVDIYSKCGSLGYAHHIFNII 119
+ A A L K A +SG+ + + S L+D+YSKCG++ A ++F +
Sbjct: 285 AGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVF--M 342
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMV-QSGVKPNQVTFTSVLHACSHVGLVD 178
+ +K++ +S++I HG + A+ LF+ MV Q+ +KPN VTF L ACSH GLVD
Sbjct: 343 SMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVD 402
Query: 179 EGLSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+G +F M + + P DHYTC++DLLGR GRL +A LI+TM ++P+ VWGALLGA
Sbjct: 403 QGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGA 462
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
C H N E+ E+AA FELEP+ GNYILL+N+YA+ G W V +VR ++ E GL+K P
Sbjct: 463 CRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTP 522
Query: 298 AQSLV 302
A S V
Sbjct: 523 AVSWV 527
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 109/244 (44%), Gaps = 35/244 (14%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
W AV+ G+ EAI ++ M E++ P + TF++LL A + DL H
Sbjct: 117 WTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTF 176
Query: 86 R-SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--------------------- 123
R GF + + V + ++D+Y KC S+ A +F+ +P +D
Sbjct: 177 RLRGFCF-VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAA 235
Query: 124 --------KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVG 175
KD++ W+A++ + ++ + A+ F+ M +SG++ ++VT + AC+ +G
Sbjct: 236 ELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLG 295
Query: 176 LVDEGLSLFQFMLKHHIIPLVDHY---TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWG 232
Q K P DH + +ID+ + G +++A N+ +M K
Sbjct: 296 ASKYADRAVQIAQKSGYSP-SDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSS 354
Query: 233 ALLG 236
+LG
Sbjct: 355 MILG 358
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 229 bits (583), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/303 (38%), Positives = 180/303 (59%), Gaps = 3/303 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y K S K+F S K WN ++ + N LA + + F +PD ATF
Sbjct: 179 YGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATF 238
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
++L + + ++ A IH ++ GF + + L+D+YSK G L + +F+ I
Sbjct: 239 LAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEIT- 297
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
D + W+A++AAY HG G A+ F MV G+ P+ VTFT +L+ACSH GLV+EG
Sbjct: 298 -SPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGK 356
Query: 182 SLFQFMLKHHII-PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
F+ M K + I P +DHY+C++DLLGR+G L DAY LI+ MP++P+ VWGALLGAC
Sbjct: 357 HYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRV 416
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
+++ +LG AA FELEP + NY++L+N+Y+A G W+D ++R+++ + GL + S
Sbjct: 417 YKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCS 476
Query: 301 LVE 303
+E
Sbjct: 477 YIE 479
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 119/236 (50%), Gaps = 15/236 (6%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDV--QPDNATFNSLLPAYAI 70
K+F + ++ WN+++SG+ + ++ +M++ +V +P+ TF S++ A
Sbjct: 87 KLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVY 146
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
++ IH +++ G L ++V + ++ Y K G L + +F + + K+++ W+
Sbjct: 147 GGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSI--KNLVSWN 204
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD-----EGLSLFQ 185
+I + ++G E ++ FN + G +P+Q TF +VL +C +G+V GL +F
Sbjct: 205 TMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFG 264
Query: 186 FMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
+ I T ++DL + GRL+D+ + + P+ W A+L A +H
Sbjct: 265 GFSGNKCIT-----TALLDLYSKLGRLEDSSTVFHEIT-SPDSMAWTAMLAAYATH 314
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 88/184 (47%), Gaps = 5/184 (2%)
Query: 54 VQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH 113
V +A +SL+ A ++ +HC +++S + LV Y + G A
Sbjct: 27 VHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAE 86
Query: 114 HIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS--GVKPNQVTFTSVLHAC 171
+F+ +P ++D++ W+++I+ Y G+ + + M+ S G +PN+VTF S++ AC
Sbjct: 87 KLFDEMP--ERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISAC 144
Query: 172 SHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVW 231
+ G +EG + ++K ++ V I+ G+ G L + L + IK N W
Sbjct: 145 VYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIK-NLVSW 203
Query: 232 GALL 235
++
Sbjct: 204 NTMI 207
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 229 bits (583), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/306 (37%), Positives = 187/306 (61%), Gaps = 4/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC + +F +T + WN+++SG+ + + EA L ++MLV QP++ T
Sbjct: 324 MYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSIT 383
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSG-FLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
S+LP A +A+L+ HCY++R F + + LVD+Y+K G + A + +++
Sbjct: 384 LASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLM 443
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+D+ + ++++I YG G G +A++LF EM +SG+KP+ VT +VL ACSH LV E
Sbjct: 444 SKRDE--VTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHE 501
Query: 180 GLSLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G LF M ++ I P + H++C++DL GRAG L A ++I MP KP+ A W LL AC
Sbjct: 502 GERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNAC 561
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H N ++G+ AA E++PEN G Y+L+AN+YAA G W + +VR ++ ++G++K P
Sbjct: 562 HIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPG 621
Query: 299 QSLVEV 304
+ ++
Sbjct: 622 CAWIDT 627
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 122/318 (38%), Gaps = 72/318 (22%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY + ++ ++F + ++ WNAV++ + + EA +LF +M V+ T
Sbjct: 188 MYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVIT 247
Query: 61 FNSL-----------------------------------LPAYAILADLKQAMNIHCYLI 85
+N + L A +++ ++ IH I
Sbjct: 248 WNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAI 307
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
S + V + L+ +YSKC L +A +F ++ + W++II+ Y + E A
Sbjct: 308 HSSYDGIDNVRNTLITMYSKCKDLRHALIVFR--QTEENSLCTWNSIISGYAQLNKSEEA 365
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII--------PLVD 197
L EM+ +G +PN +T S+L C+ + + G ++L+ LVD
Sbjct: 366 SHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVD 425
Query: 198 ------------------------HYTCIIDLLGRAGRLDDAYNLIRTMP---IKPNHAV 230
YT +ID G G A L + M IKP+H
Sbjct: 426 VYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVT 485
Query: 231 WGALLGACVSHENVELGE 248
A+L AC + V GE
Sbjct: 486 VVAVLSACSHSKLVHEGE 503
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 2/163 (1%)
Query: 25 PWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYL 84
PWN +++ + N L E I +K+M+ + ++PD T+ S+L A D+ +H +
Sbjct: 111 PWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSI 170
Query: 85 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEM 144
S + L V + L+ +Y + ++G A +F+ + ++D + W+A+I Y G
Sbjct: 171 EVSSYKSSLYVCNALISMYKRFRNMGIARRLFD--RMFERDAVSWNAVINCYASEGMWSE 228
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM 187
A LF++M SGV+ + +T+ + C G L L M
Sbjct: 229 AFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRM 271
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 229 bits (583), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 185/304 (60%), Gaps = 3/304 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y++C + ++F K T W A++ G + N +A++LF++M +E+V + T
Sbjct: 199 YSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTA 258
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+L A + L L+ +H ++ V + L+++YS+CG + A +F + +
Sbjct: 259 VCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRV--M 316
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
+DKD+I ++ +I+ HG A++ F +MV G +PNQVT ++L+ACSH GL+D GL
Sbjct: 317 RDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGL 376
Query: 182 SLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+F M + ++ P ++HY CI+DLLGR GRL++AY I +PI+P+H + G LL AC
Sbjct: 377 EVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKI 436
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H N+ELGE A+ FE E ++G Y+LL+NLYA+ G+W++ ++R+ + + G+ K P S
Sbjct: 437 HGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCS 496
Query: 301 LVEV 304
+EV
Sbjct: 497 TIEV 500
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 138/339 (40%), Gaps = 73/339 (21%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
+ +Y +F S + A++ GF+ + + + + L+ +M+ V PDN S+L A
Sbjct: 78 DYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKA- 136
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD----- 123
DLK IH +++ GF V +++IY K G L A +F+ +P +D
Sbjct: 137 ---CDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAAT 193
Query: 124 ------------------------KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKP 159
KD + W+A+I ++ A+ LF EM V
Sbjct: 194 VMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSA 253
Query: 160 NQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHY-TCIIDLLGRAGRLDDAYNL 218
N+ T VL ACS +G ++ G + F +++ + L + +I++ R G +++A +
Sbjct: 254 NEFTAVCVLSACSDLGALELGRWVHSF-VENQRMELSNFVGNALINMYSRCGDINEARRV 312
Query: 219 IRTMP----------------------------------IKPNHAVWGALLGACVSHENV 244
R M +PN ALL AC +
Sbjct: 313 FRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLL 372
Query: 245 ELG-EV--AARWTFELEPENTGNYILLANLYAAVGRWRD 280
++G EV + + F +EP+ +Y + +L VGR +
Sbjct: 373 DIGLEVFNSMKRVFNVEPQ-IEHYGCIVDLLGRVGRLEE 410
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 228 bits (582), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/306 (40%), Positives = 181/306 (59%), Gaps = 4/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y KC NL+ +F KT K WN ++S +I +A++++ QM+ V+PD T
Sbjct: 353 LYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVT 412
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S+LPA + LA L++ IH + S + S L+D+YSKCG+ A IFN IP
Sbjct: 413 FTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP 472
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
KD++ W+ +I+AYG HG A+ F+EM + G+KP+ VT +VL AC H GL+DEG
Sbjct: 473 --KKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEG 530
Query: 181 LSLF-QFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHA-VWGALLGAC 238
L F Q K+ I P+++HY+C+ID+LGRAGRL +AY +I+ P ++A + L AC
Sbjct: 531 LKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSAC 590
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H LG+ AR E P++ Y++L NLYA+ W +VR + E+GLRK P
Sbjct: 591 CLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPG 650
Query: 299 QSLVEV 304
S +E+
Sbjct: 651 CSWIEM 656
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 133/246 (54%), Gaps = 13/246 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC+C ++ ++F K +K WN+++ G++ ++ +++ +M++E +P T
Sbjct: 252 MYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTT 311
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A + +L IH Y+IRS + V L+D+Y KCG A +F+
Sbjct: 312 LTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKT- 370
Query: 121 LKDKDII-IWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
KD+ W+ +I++Y G+ AV ++++MV GVKP+ VTFTSVL ACS + +++
Sbjct: 371 --QKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEK 428
Query: 180 G----LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
G LS+ + L+ + L + ++D+ + G +A+ + ++P K + W ++
Sbjct: 429 GKQIHLSISESRLETDELLL----SALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMI 483
Query: 236 GACVSH 241
A SH
Sbjct: 484 SAYGSH 489
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 119/246 (48%), Gaps = 9/246 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAK N S ++F + ++ A WN V+S F + A +A++LF +M +P++ +
Sbjct: 151 MYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVS 210
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ A + L L++ IH ++ GF V S LVD+Y KC L A +F +P
Sbjct: 211 LTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMP 270
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
K ++ W+++I Y G + V + N M+ G +P+Q T TS+L ACS + G
Sbjct: 271 --RKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHG 328
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAV---WGALLGA 237
+ ++++ + + +IDL + G NL T+ K V W ++ +
Sbjct: 329 KFIHGYVIRSVVNADIYVNCSLIDLYFKCGEA----NLAETVFSKTQKDVAESWNVMISS 384
Query: 238 CVSHEN 243
+S N
Sbjct: 385 YISVGN 390
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 135/261 (51%), Gaps = 14/261 (5%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDV-QPDNATFNSLLPAYAILADLKQAMNIHCYL 84
WN+++SG+ NS+ + +++FK++L + PD+ TF +++ AY L IH +
Sbjct: 74 WNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLV 133
Query: 85 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEM 144
++SG++ + VAS LV +Y+K + +F+ +P ++D+ W+ +I+ + + G E
Sbjct: 134 VKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMP--ERDVASWNTVISCFYQSGEAEK 191
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHY--TCI 202
A+ LF M SG +PN V+ T + ACS + ++ G + + +K +D Y + +
Sbjct: 192 ALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGF--ELDEYVNSAL 249
Query: 203 IDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL-GACVSHENVELGEVAARWTFE-LEPE 260
+D+ G+ L+ A + + MP + + W +++ G ++ E+ R E P
Sbjct: 250 VDMYGKCDCLEVAREVFQKMP-RKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPS 308
Query: 261 NTGNYILLANLYAAVGRWRDV 281
T L ++ A R R++
Sbjct: 309 QT----TLTSILMACSRSRNL 325
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 228 bits (580), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 115/304 (37%), Positives = 186/304 (61%), Gaps = 6/304 (1%)
Query: 5 CNCGNLSYKM--FMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFN 62
C CG LS F + K WN ++S + S + EA+ +F++ + P+ TF
Sbjct: 259 CRCGYLSEAKHYFHEMEDKDLITWNTLISE-LERSDSSEALLMFQRFESQGFVPNCYTFT 317
Query: 63 SLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK 122
SL+ A A +A L +H + R GF +E+A+ L+D+Y+KCG++ + +F I +
Sbjct: 318 SLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEI-VD 376
Query: 123 DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLS 182
++++ W++++ YG HG+G AV LF++MV SG++P+++ F +VL AC H GLV++GL
Sbjct: 377 RRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLK 436
Query: 183 LFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
F M + I P D Y C++DLLGRAG++ +AY L+ MP KP+ + WGA+LGAC +H
Sbjct: 437 YFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAH 496
Query: 242 E-NVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
+ N + +AAR EL+P+ G Y++L+ +YAA G+W D +VR M+ +G +K S
Sbjct: 497 KHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMS 556
Query: 301 LVEV 304
+ V
Sbjct: 557 WILV 560
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 119/251 (47%), Gaps = 8/251 (3%)
Query: 1 MYAKCNCG-NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
MYA C+ + +F K W +++GF H ++++KQML+E+ +
Sbjct: 155 MYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPY 214
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
+ A A + + IH +I+ GF L V + ++D+Y +CG L A H F+
Sbjct: 215 CITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFH-- 272
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
++DKD+I W+ +I+ + E A+ +F G PN TFTS++ AC+++ ++
Sbjct: 273 EMEDKDLITWNTLISELERSDSSE-ALLMFQRFESQGFVPNCYTFTSLVAACANIAALNC 331
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
G L + + V+ +ID+ + G + D+ + + + N W +++
Sbjct: 332 GQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYG 391
Query: 240 SH----ENVEL 246
SH E VEL
Sbjct: 392 SHGYGAEAVEL 402
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 95 VASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ 154
+A+ L+ Y + G + A +F+ +P D+D++ W+A+I Y + A F+EMV+
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMP--DRDVVAWTAMITGYASSNYNARAWECFHEMVK 104
Query: 155 SGVKPNQVTFTSVLHACSHVGLVDEG 180
G PN+ T +SVL +C ++ ++ G
Sbjct: 105 QGTSPNEFTLSSVLKSCRNMKVLAYG 130
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 228 bits (580), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 183/304 (60%), Gaps = 2/304 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YAK + K+F + +K W A+++G++ A+ LF++M+ V+P+ TF
Sbjct: 255 YAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTF 314
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+S L A A +A L+ IH Y+IR+ V S L+D+YSK GSL + +F I
Sbjct: 315 SSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDD 374
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
K D + W+ +I+A +HG G A+ + ++M++ V+PN+ T +L+ACSH GLV+EGL
Sbjct: 375 KH-DCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGL 433
Query: 182 SLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
F+ M ++H I+P +HY C+IDLLGRAG + I MP +P+ +W A+LG C
Sbjct: 434 RWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRI 493
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H N ELG+ AA +L+PE++ YILL+++YA G+W VEK+R ++ + + K A S
Sbjct: 494 HGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVS 553
Query: 301 LVEV 304
+E+
Sbjct: 554 WIEI 557
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 128/289 (44%), Gaps = 37/289 (12%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F ++ WN ++ G+ + EA+ +K+ ++ + +F LL A
Sbjct: 135 VFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQ 194
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD---------- 123
L+ H ++ +GFL + ++ ++D Y+KCG + A F+ + +KD
Sbjct: 195 LQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISG 254
Query: 124 -------------------KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTF 164
K+ + W+A+IA Y + G G A+ LF +M+ GVKP Q TF
Sbjct: 255 YAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTF 314
Query: 165 TSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPI 224
+S L A + + + G + +M++ ++ P + +ID+ ++G L+ + + R
Sbjct: 315 SSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDD 374
Query: 225 KPNHAVWGALLGACVSHENVELGEVAARW-----TFELEPENTGNYILL 268
K + W ++ A H LG A R F ++P T ++L
Sbjct: 375 KHDCVFWNTMISALAQH---GLGHKALRMLDDMIKFRVQPNRTTLVVIL 420
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 228 bits (580), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 115/282 (40%), Positives = 167/282 (59%), Gaps = 3/282 (1%)
Query: 24 APWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCY 83
+ WNA++SG + N+ E I F++M+ +P+ T +SLLP+ ++LK IH +
Sbjct: 332 STWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAF 391
Query: 84 LIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGE 143
IR+G + V + ++D Y+K G L A +F+ KD+ +I W+AII AY HG +
Sbjct: 392 AIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFD--NCKDRSLIAWTAIITAYAVHGDSD 449
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML-KHHIIPLVDHYTCI 202
A SLF++M G KP+ VT T+VL A +H G D +F ML K+ I P V+HY C+
Sbjct: 450 SACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACM 509
Query: 203 IDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENT 262
+ +L RAG+L DA I MPI P VWGALL ++E+ A FE+EPENT
Sbjct: 510 VSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENT 569
Query: 263 GNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
GNY ++ANLY GRW + E VR+ + +GL+K+P S +E
Sbjct: 570 GNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIET 611
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLV-EDVQPDNAT 60
Y KC+ + K+F + S++ WN+++SG+ + + +++K ML D +P+ T
Sbjct: 177 YTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVT 236
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+ A +DL + +H +I + L + + ++ Y+KCGSL YA +F+
Sbjct: 237 VISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFD--E 294
Query: 121 LKDKDIIIWSAIIAAYGKHG-------------------------------HGEMAVSLF 149
+ +KD + + AII+ Y HG H E ++ F
Sbjct: 295 MSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSF 354
Query: 150 NEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH-------IIPLVDHYTCI 202
EM++ G +PN VT +S+L + ++ + G + F +++ ++D+Y +
Sbjct: 355 REMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKL 414
Query: 203 IDLLGRAGRLDDAYN--LIRTMPIKPNHAVWGALLGAC 238
LLG D+ + LI I +AV G AC
Sbjct: 415 GFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSAC 452
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 114/238 (47%), Gaps = 13/238 (5%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQML------VEDVQPDNATFNSLLPA 67
+F + + + +NA+L + + +A LF + + +PD+ + + +L A
Sbjct: 79 VFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKA 138
Query: 68 YAILADL---KQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDK 124
+ D A +H ++IR GF + V + ++ Y+KC ++ A +F+ + ++
Sbjct: 139 LSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFD--EMSER 196
Query: 125 DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSVLHACSHVGLVDEGLSL 183
D++ W+++I+ Y + G E ++ M+ S KPN VT SV AC + GL +
Sbjct: 197 DVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEV 256
Query: 184 FQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
+ M+++HI + +I + G LD A L M K + +GA++ ++H
Sbjct: 257 HKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEK-DSVTYGAIISGYMAH 313
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 226 bits (577), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/307 (39%), Positives = 189/307 (61%), Gaps = 6/307 (1%)
Query: 2 YAKCNCGNLS--YKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
YAK G ++ K+F + K +N+++S + + ++ EA ++F++++ V NA
Sbjct: 228 YAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNA 287
Query: 60 -TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
T +++L A + L+ IH +IR G + V + ++D+Y KCG + A F+
Sbjct: 288 ITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFD- 346
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
+K+K++ W+A+IA YG HGH A+ LF M+ SGV+PN +TF SVL ACSH GL
Sbjct: 347 -RMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHV 405
Query: 179 EGLSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
EG F M + + P ++HY C++DLLGRAG L AY+LI+ M +KP+ +W +LL A
Sbjct: 406 EGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
C H+NVEL E++ FEL+ N G Y+LL+++YA GRW+DVE+VR ++ GL K P
Sbjct: 466 CRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPP 525
Query: 298 AQSLVEV 304
SL+E+
Sbjct: 526 GFSLLEL 532
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 139/288 (48%), Gaps = 24/288 (8%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+ C + K+F + K+ W +++ G+ N A +A+ LFK +LV++ D+A
Sbjct: 120 MYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAM 179
Query: 61 FNSLLPAYAILADLKQ------AMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLG--YA 112
F + ++++ + +IH ++I+ GF + V + L+D Y+K G G A
Sbjct: 180 FLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVA 239
Query: 113 HHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKP-NQVTFTSVLHAC 171
IF+ I DKD + +++I++ Y + G A +F +V++ V N +T ++VL A
Sbjct: 240 RKIFDQIV--DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAV 297
Query: 172 SHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVW 231
SH G + G + +++ + V T IID+ + GR++ A M K N W
Sbjct: 298 SHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNK-NVRSW 356
Query: 232 GALLGACVSHENVELGEVAARWTFELEPE--NTG---NYILLANLYAA 274
A++ H + A EL P ++G NYI ++ AA
Sbjct: 357 TAMIAGYGMHGH-------AAKALELFPAMIDSGVRPNYITFVSVLAA 397
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 8/208 (3%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
NL+ K WN+V++ + + EA+ F M + P ++F + A
Sbjct: 27 NLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKAC 86
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIII 128
+ L D+ H G+ + V+S L+ +YS CG L A +F+ IP ++I+
Sbjct: 87 SSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP--KRNIVS 144
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTF------TSVLHACSHVGLVDEGLS 182
W+++I Y +G+ AVSLF +++ + F SV+ ACS V S
Sbjct: 145 WTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTES 204
Query: 183 LFQFMLKHHIIPLVDHYTCIIDLLGRAG 210
+ F++K V ++D + G
Sbjct: 205 IHSFVIKRGFDRGVSVGNTLLDAYAKGG 232
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 2/146 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + K F + K W A+++G+ + A +A++LF M+ V+P+ T
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390
Query: 61 FNSLLPAYAILADLKQAMN-IHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F S+L A + + + R G LE +VD+ + G L A+ + +
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMA 145
+K D IIWS+++AA H + E+A
Sbjct: 451 KMK-PDSIIWSSLLAACRIHKNVELA 475
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 226 bits (575), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/292 (37%), Positives = 178/292 (60%), Gaps = 3/292 (1%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F K ++ WN ++SG+ N ++A+++F++M D++P+ T S+LPA + L
Sbjct: 230 LFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGS 289
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
L+ +H Y SG + S L+D+YSKCG + A H+F +P ++ +I WSA+I
Sbjct: 290 LELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPREN--VITWSAMI 347
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK-HHI 192
+ HG A+ F +M Q+GV+P+ V + ++L ACSH GLV+EG F M+ +
Sbjct: 348 NGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGL 407
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAAR 252
P ++HY C++DLLGR+G LD+A I MPIKP+ +W ALLGAC NVE+G+ A
Sbjct: 408 EPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVAN 467
Query: 253 WTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
++ P ++G Y+ L+N+YA+ G W +V ++R + E +RK P SL+++
Sbjct: 468 ILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDI 519
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 124/281 (44%), Gaps = 51/281 (18%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLARE--AIQLFKQMLVED-VQPDNATFNSLL 65
+ ++K+F + ++ WN ++ GF + + AI LF +M+ ++ V+P+ TF S+L
Sbjct: 76 DYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVL 135
Query: 66 PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF--NII---- 119
A A +++ IH ++ GF V S LV +Y CG + A +F NII
Sbjct: 136 KACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDM 195
Query: 120 -------------------------------------PLKDKDIIIWSAIIAAYGKHGHG 142
++ + ++ W+ +I+ Y +G
Sbjct: 196 VVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFF 255
Query: 143 EMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHY--T 200
+ AV +F EM + ++PN VT SVL A S +G ++ G L + I +D +
Sbjct: 256 KDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGI--RIDDVLGS 313
Query: 201 CIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
+ID+ + G ++ A ++ +P + N W A++ H
Sbjct: 314 ALIDMYSKCGIIEKAIHVFERLP-RENVITWSAMINGFAIH 353
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 67/136 (49%), Gaps = 13/136 (9%)
Query: 64 LLPAYAILADLKQAMNIHCYLIRSGFLY-RLEVASIL-----VDIYSKCGSLGYAHHIFN 117
L P ++ IH I+SG + L A IL D++ + L YAH IFN
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHR--DLDYAHKIFN 83
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGE--MAVSLFNEMVQSG-VKPNQVTFTSVLHACSHV 174
+P ++ W+ II + + + +A++LF EM+ V+PN+ TF SVL AC+
Sbjct: 84 QMP--QRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKT 141
Query: 175 GLVDEGLSLFQFMLKH 190
G + EG + LK+
Sbjct: 142 GKIQEGKQIHGLALKY 157
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 2/151 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC + +F + ++ W+A+++GF + A +AI F +M V+P +
Sbjct: 318 MYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 377
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIR-SGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
+ +LL A + +++ ++ G R+E +VD+ + G L A +
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFN 150
P+K D +IW A++ A G+ EM + N
Sbjct: 438 PIKPDD-VIWKALLGACRMQGNVEMGKRVAN 467
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 225 bits (574), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/306 (37%), Positives = 183/306 (59%), Gaps = 9/306 (2%)
Query: 4 KCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNS 63
KC + + ++F + ++K WNA++SG+++ +EA+ +FK+M PD T S
Sbjct: 221 KCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILS 280
Query: 64 LLPAYAILADLKQAMNIHCYL-----IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
LL A A+L DL+ +H Y+ + S + + L+D+Y+KCGS+ A +F
Sbjct: 281 LLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRG 340
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
+ KD+D+ W+ +I H H E ++ +F EM + V PN+VTF V+ ACSH G VD
Sbjct: 341 V--KDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVD 397
Query: 179 EGLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
EG F M ++I P + HY C++D+LGRAG+L++A+ + +M I+PN VW LLGA
Sbjct: 398 EGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGA 457
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
C + NVELG+ A + + +G+Y+LL+N+YA+ G+W V+KVR M ++ ++K
Sbjct: 458 CKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPT 517
Query: 298 AQSLVE 303
SL+E
Sbjct: 518 GVSLIE 523
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 117/290 (40%), Gaps = 66/290 (22%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
++K+F + K + N VL G + + + L+ +M V PD TF +L A +
Sbjct: 65 AHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSK 124
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI------------ 118
L H ++R GF+ V + L+ ++ CG LG A +F+
Sbjct: 125 LEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSM 184
Query: 119 -------------------IPLKDK-----------------------------DIIIWS 130
+P KD+ D++ W+
Sbjct: 185 TSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWN 244
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
A+I+ Y G+ + A+ +F EM +G P+ VT S+L AC+ +G ++ G L ++L+
Sbjct: 245 AMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILET 304
Query: 191 HIIPLVDH-----YTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ + + +ID+ + G +D A + R + + + + W L+
Sbjct: 305 ASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDR-DLSTWNTLI 353
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 100/238 (42%), Gaps = 45/238 (18%)
Query: 55 QPDNATFNSLLPA-YAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKC----GSL 109
Q ++ T N P + +++ IH ++ +G + L V L IYS G+L
Sbjct: 5 QTNDRTTNRRRPKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGEL--IYSASLSVPGAL 62
Query: 110 GYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLH 169
YAH +F+ IP D+ I + ++ + E VSL+ EM + GV P++ TFT VL
Sbjct: 63 KYAHKLFDEIP--KPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLK 120
Query: 170 ACSHVGLVDEGLSLFQFMLKHHII-----------------------PLVDH-------- 198
ACS + G + +++H + L D
Sbjct: 121 ACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVA 180
Query: 199 YTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFE 256
++ + + G++D+A L MP K + W ++ C+ + ++ +AR F+
Sbjct: 181 WSSMTSGYAKRGKIDEAMRLFDEMPYK-DQVAWNVMITGCLKCKEMD----SARELFD 233
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 181/306 (59%), Gaps = 5/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + + K+F + + W ++SGF A EA LF+QML E + P+ T
Sbjct: 255 MYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCT 314
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
++L + + L L+ ++H Y+IR+G + +D+Y++CG++ A +F+++P
Sbjct: 315 LAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMP 374
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++++I WS++I A+G +G E A+ F++M V PN VTF S+L ACSH G V EG
Sbjct: 375 --ERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEG 432
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F+ M + + ++P +HY C++DLLGRAG + +A + I MP+KP + WGALL AC
Sbjct: 433 WKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACR 492
Query: 240 SHENVEL-GEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H+ V+L GE+A + +EPE + Y+LL+N+YA G W V VR + G RK
Sbjct: 493 IHKEVDLAGEIAEK-LLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVG 551
Query: 299 QSLVEV 304
QS EV
Sbjct: 552 QSATEV 557
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 115/238 (48%), Gaps = 4/238 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYA+ + K+F + + + W ++ G++ S E +LF M + D T
Sbjct: 153 MYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALT 212
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLE-VASILVDIYSKCGSLGYAHHIFNII 119
L+ A + K +H IR F+ + + + + ++D+Y KC L A +F
Sbjct: 213 LICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETS 272
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
D+++++W+ +I+ + K A LF +M++ + PNQ T ++L +CS +G +
Sbjct: 273 V--DRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRH 330
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
G S+ +M+++ I ++T ID+ R G + A + MP + N W +++ A
Sbjct: 331 GKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMP-ERNVISWSSMINA 387
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 129/316 (40%), Gaps = 54/316 (17%)
Query: 20 KKRTAPWNAVLSGFIHNSLA--REAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQA 77
K+ WN +LSG+ + + + L+ +M D+ + A L L+
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 78 MNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYG 137
+ IH +++G VA LV++Y++ G++ A +F+ IP+++ ++W ++ Y
Sbjct: 129 ILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNS--VLWGVLMKGYL 186
Query: 138 KHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHV----------------------- 174
K+ LF M +G+ + +T ++ AC +V
Sbjct: 187 KYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSD 246
Query: 175 -------------GLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRT 221
L+D LF+ + +++ +T +I + R +A++L R
Sbjct: 247 YLQASIIDMYVKCRLLDNARKLFETSVDRNVV----MWTTLISGFAKCERAVEAFDLFRQ 302
Query: 222 M---PIKPNHAVWGALLGACVSHENVELGEVA----ARWTFELEPENTGNYILLANLYAA 274
M I PN A+L +C S ++ G+ R E++ N ++I ++YA
Sbjct: 303 MLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFI---DMYAR 359
Query: 275 VGRWRDVEKVRDMVNE 290
G + V DM+ E
Sbjct: 360 CGNIQMARTVFDMMPE 375
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 83/185 (44%), Gaps = 16/185 (8%)
Query: 64 LLP---AYAILADLKQA------MNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHH 114
+LP A A+L L QA +H +I GF + + S L + Y + L +A
Sbjct: 1 MLPVNRARALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATS 60
Query: 115 IFNIIPLKDKDIIIWSAIIAAYGKHGHG--EMAVSLFNEMVQSGVKPNQVTFTSVLHACS 172
FN IP ++ W+ I++ Y K + L+N M + + + AC
Sbjct: 61 SFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACV 120
Query: 173 HVGLVDEGLSLFQFMLKHHIIPLVDHYTC--IIDLLGRAGRLDDAYNLIRTMPIKPNHAV 230
+GL++ G+ + +K+ + D Y ++++ + G ++ A + +P++ N +
Sbjct: 121 GLGLLENGILIHGLAMKNGLDK--DDYVAPSLVEMYAQLGTMESAQKVFDEIPVR-NSVL 177
Query: 231 WGALL 235
WG L+
Sbjct: 178 WGVLM 182
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 224 bits (572), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 183/302 (60%), Gaps = 3/302 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y K ++++MF + + WNA+++ ++H + +AI LF +M+ E+ +P + T
Sbjct: 477 LYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSIT 535
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+LL A L++ IH Y+ + L +++ L+D+Y+KCG L + +F+
Sbjct: 536 LVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFD--A 593
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
KD + W+ +I+ YG HG E A++LF++M +S VKP TF ++L AC+H GLV++G
Sbjct: 594 GNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQG 653
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
LF M ++ + P + HY+C++DLL R+G L++A + + +MP P+ +WG LL +C++
Sbjct: 654 KKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMT 713
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H E+G A +P+N G YI+LAN+Y+A G+W + E+ R+M+ E G+ K S
Sbjct: 714 HGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHS 773
Query: 301 LV 302
+V
Sbjct: 774 VV 775
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 104/225 (46%), Gaps = 6/225 (2%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YA NLS ++F +++ WN+++ N ++ F ML+ PD+ T
Sbjct: 69 YASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTA 128
Query: 62 NSLLPAYAILADLKQAMNIHCYLIR-SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
++ A A L +H +++ GF V + V YSKCG L A +F+ +P
Sbjct: 129 PMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMP 188
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGV---KPNQVTFTSVLHACSHVGLV 177
D+D++ W+AII+ + ++G E + +M +G KPN T ACS++G +
Sbjct: 189 --DRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGAL 246
Query: 178 DEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM 222
EG L F +K+ + + + ++G +AY R +
Sbjct: 247 KEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFREL 291
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 136/322 (42%), Gaps = 38/322 (11%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y+K + +Y F + + W ++++ + E+ +F +M + + PD
Sbjct: 275 YSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVI 334
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+ L+ + + Q H ++IR F V + L+ +Y K L A +F I
Sbjct: 335 SCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRIS- 393
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
++ + W+ ++ YGK + LF ++ G++ + + TSV+ +CSH+G V G
Sbjct: 394 EEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGK 453
Query: 182 SLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNL----------------------- 218
SL +++K + + +IDL G+ G L A+ +
Sbjct: 454 SLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNVITWNAMIASYVHCEQ 513
Query: 219 ----------IRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPE-NTGNYIL 267
+ + KP+ LL ACV+ ++E G++ R+ E E E N
Sbjct: 514 SEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAA 573
Query: 268 LANLYAAVGRWRDVEKVRDMVN 289
L ++YA G +EK R++ +
Sbjct: 574 LIDMYAKCGH---LEKSRELFD 592
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 84 LIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGE 143
+I G + VAS L+ Y+ G + +F+++ +DI +W++II A+ +G
Sbjct: 50 IITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVT--RRDIFLWNSIIKAHFSNGDYA 107
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACS-----HVGLVDEGLSLFQFMLKHHIIPLVDH 198
++ F M+ SG P+ T V+ AC+ HVG GL +LKH D
Sbjct: 108 RSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGL-----VLKHGGF---DR 159
Query: 199 YTCI----IDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 247
T + + + G L DA + MP + + W A++ V + E G
Sbjct: 160 NTAVGASFVYFYSKCGFLQDACLVFDEMPDR-DVVAWTAIISGHVQNGESEGG 211
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 224 bits (572), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 179/306 (58%), Gaps = 5/306 (1%)
Query: 2 YAKCNCGNLSYKMF--MKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
Y+K ++ MF M K W +++G+ L +EA +L QM+ ++ D A
Sbjct: 257 YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAA 316
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
S+L A L M IH L RS V + L+D+Y+KCG+L A +FN I
Sbjct: 317 AVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDI 376
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
P KD++ W+ ++ G HGHG+ A+ LF+ M + G++P++VTF +VL +C+H GL+DE
Sbjct: 377 P--KKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDE 434
Query: 180 GLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G+ F M K + ++P V+HY C++DLLGR GRL +A +++TMP++PN +WGALLGAC
Sbjct: 435 GIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGAC 494
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H V++ + +L+P + GNY LL+N+YAA W V +R + +G+ K
Sbjct: 495 RMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSG 554
Query: 299 QSLVEV 304
S VE+
Sbjct: 555 ASSVEL 560
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 143/297 (48%), Gaps = 21/297 (7%)
Query: 7 CGNL----SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFN 62
CG L + K+F K S++ T WN++L G + R+A +LF +M Q D ++N
Sbjct: 165 CGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEM----PQRDLISWN 220
Query: 63 SLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK 122
++L YA ++ +A + + + S +V YSK G + A +F+ +PL
Sbjct: 221 TMLDGYARCREMSKAFELFEKMPERNTVS----WSTMVMGYSKAGDMEMARVMFDKMPLP 276
Query: 123 DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLS 182
K+++ W+ IIA Y + G + A L ++MV SG+K + S+L AC+ GL+ G+
Sbjct: 277 AKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMR 336
Query: 183 LFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL-GACVSH 241
+ + + ++ ++D+ + G L A+++ +P K + W +L G V
Sbjct: 337 IHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIP-KKDLVSWNTMLHGLGVHG 395
Query: 242 ENVELGEVAARWTFE-LEPENTGNYILLAN------LYAAVGRWRDVEKVRDMVNEV 291
E E+ +R E + P+ +L + + + + +EKV D+V +V
Sbjct: 396 HGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQV 452
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 104/226 (46%), Gaps = 8/226 (3%)
Query: 5 CNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSL 64
C NL+ ++F + + N+++ NS +A +F +M + DN T+ L
Sbjct: 64 CRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFL 123
Query: 65 LPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDK 124
L A + + L +H ++ + G + V + L+D YS+CG LG + + ++
Sbjct: 124 LKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER 183
Query: 125 DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLF 184
D + W++++ K G A LF+EM Q + +++ ++L + + + LF
Sbjct: 184 DTVSWNSMLGGLVKAGELRDARRLFDEMPQRDL----ISWNTMLDGYARCREMSKAFELF 239
Query: 185 QFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAV 230
+ M + + + ++ ++ +AG ++ A + MP+ + V
Sbjct: 240 EKMPERNTV----SWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVV 281
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 25/186 (13%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC ++ +F KK WN +L G + +EAI+LF +M E ++PD T
Sbjct: 359 MYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVT 418
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLY------------RLEVASILVDIYSKCGS 108
F ++L + H LI G Y ++E LVD+ + G
Sbjct: 419 FIAVLCSCN-----------HAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGR 467
Query: 109 LGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSV 167
L A + +P+ + +++IW A++ A H ++A + + +V+ P + S
Sbjct: 468 LKEAIKVVQTMPM-EPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSN 526
Query: 168 LHACSH 173
++A +
Sbjct: 527 IYAAAE 532
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 32/252 (12%)
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F L A+L Q +H +IR L +A L+ S C A +FN +
Sbjct: 19 FEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQV- 77
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++ ++ + +++I A+ ++ A +F+EM + G+ + T+ +L ACS G
Sbjct: 78 -QEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACS-------G 129
Query: 181 LSLFQF--MLKHHIIPL---VDHY--TCIIDLLGRAGRLD--DAYNLIRTMPIKPNHAVW 231
S M+ +HI L D Y +ID R G L DA L M + + W
Sbjct: 130 QSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER-DTVSW 188
Query: 232 GALLGACVSHENVELGEVA-ARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNE 290
++LG V+ GE+ AR F+ P+ + I + R R++ K ++
Sbjct: 189 NSMLGGL-----VKAGELRDARRLFDEMPQR--DLISWNTMLDGYARCREMSKAFEL--- 238
Query: 291 VGLRKLPAQSLV 302
K+P ++ V
Sbjct: 239 --FEKMPERNTV 248
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 224 bits (572), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 114/305 (37%), Positives = 182/305 (59%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y KC + ++F K W +++S N EA++LF++M+ + D+
Sbjct: 530 VYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVA 589
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L A A L+ L + IHCYL+R GF +A +VD+Y+ CG L A +F+ I
Sbjct: 590 LLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRI- 648
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ K ++ ++++I AYG HG G+ AV LF++M V P+ ++F ++L+ACSH GL+DEG
Sbjct: 649 -ERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEG 707
Query: 181 LSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+ M ++ + P +HY C++D+LGRA + +A+ ++ M +P VW ALL AC
Sbjct: 708 RGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACR 767
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
SH E+GE+AA+ ELEP+N GN +L++N++A GRW DVEKVR + G+ K P
Sbjct: 768 SHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGC 827
Query: 300 SLVEV 304
S +E+
Sbjct: 828 SWIEM 832
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 134/272 (49%), Gaps = 37/272 (13%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KCN + F++ K W V++G+ N EA++LF+ + + ++ D
Sbjct: 430 MYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMI 489
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A ++L + IHC+++R G L + + + LVD+Y KC ++GYA +F I
Sbjct: 490 LGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESI- 547
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
K KD++ W+++I++ +G+ AV LF MV++G+ + V +L A + + +++G
Sbjct: 548 -KGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKG 606
Query: 181 LSLFQFMLKHHI-------IPLVDHYTC---------IIDLLGRAGRLD-----DAYNL- 218
+ ++L+ + +VD Y C + D + R G L +AY +
Sbjct: 607 REIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMH 666
Query: 219 ------------IRTMPIKPNHAVWGALLGAC 238
+R + P+H + ALL AC
Sbjct: 667 GCGKAAVELFDKMRHENVSPDHISFLALLYAC 698
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 128/279 (45%), Gaps = 7/279 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + + K+F + + WN ++ ++ N A+ L+ M VE V ++
Sbjct: 125 MYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSS 184
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F +LL A A L D++ +H L++ G+ + + LV +Y+K L A +F+
Sbjct: 185 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQ 244
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
K D ++W++I+++Y G + LF EM +G PN T S L AC G
Sbjct: 245 EKG-DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLG 303
Query: 181 LSLFQFMLKHHIIPLVDHYTC--IIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
+ +LK + Y C +I + R G++ A ++R M + W +L+
Sbjct: 304 KEIHASVLKSSTHS-SELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLIKGY 361
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGR 277
V +N+ E ++ + + + + + ++ AA GR
Sbjct: 362 V--QNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGR 398
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 93/172 (54%), Gaps = 2/172 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY +C + ++ + + WN+++ G++ N + +EA++ F M+ + D +
Sbjct: 329 MYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVS 388
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S++ A L++L M +H Y+I+ G+ L+V + L+D+YSKC Y F +
Sbjct: 389 MTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAF--LR 446
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACS 172
+ DKD+I W+ +IA Y ++ A+ LF ++ + ++ +++ S+L A S
Sbjct: 447 MHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 103/192 (53%), Gaps = 4/192 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAP-WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
MYAK + + + ++F +K A WN++LS + + + E ++LF++M + P++
Sbjct: 226 MYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSY 285
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSG-FLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
T S L A + K IH +++S L V + L+ +Y++CG + A I
Sbjct: 286 TIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILR- 344
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
+ + D++ W+++I Y ++ + A+ F++M+ +G K ++V+ TS++ A + +
Sbjct: 345 -QMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLL 403
Query: 179 EGLSLFQFMLKH 190
G+ L +++KH
Sbjct: 404 AGMELHAYVIKH 415
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 15/203 (7%)
Query: 46 FKQMLVEDVQP-DNATFNSLLPAYAILADL-------KQAMNIHCYLIRSGFLYRLE-VA 96
F +L E Q D + NS + A+A + +L Q +H + ++ + L+ +A
Sbjct: 60 FDGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLA 119
Query: 97 SILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG 156
LV +Y KCGSL A +F+ +P D+ W+ +I AY +G A++L+ M G
Sbjct: 120 GKLVFMYGKCGSLDDAEKVFDEMP--DRTAFAWNTMIGAYVSNGEPASALALYWNMRVEG 177
Query: 157 VKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK--HHIIPLVDHYTCIIDLLGRAGRLDD 214
V +F ++L AC+ + + G L ++K +H + ++ + + L
Sbjct: 178 VPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFI--VNALVSMYAKNDDLSA 235
Query: 215 AYNLIRTMPIKPNHAVWGALLGA 237
A L K + +W ++L +
Sbjct: 236 ARRLFDGFQEKGDAVLWNSILSS 258
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 224 bits (570), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 114/269 (42%), Positives = 165/269 (61%), Gaps = 3/269 (1%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
M + K W +++SG +HN +A FKQML + P++AT +LLPA LA
Sbjct: 244 MCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAY 303
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
+K IH Y + +G V S L+D+Y KCG + A +F P K + ++++I
Sbjct: 304 MKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTP--KKTTVTFNSMI 361
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML-KHHI 192
Y HG + AV LF++M +G K + +TFT++L ACSH GL D G +LF M K+ I
Sbjct: 362 FCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRI 421
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAAR 252
+P ++HY C++DLLGRAG+L +AY +I+ M ++P+ VWGALL AC +H N+EL +AA+
Sbjct: 422 VPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAK 481
Query: 253 WTFELEPENTGNYILLANLYAAVGRWRDV 281
ELEPEN+GN +LL +LYA G W V
Sbjct: 482 HLAELEPENSGNGLLLTSLYANAGSWESV 510
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 120/239 (50%), Gaps = 7/239 (2%)
Query: 7 CGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSL 64
CG + + K+F + K+ + ++ N +E++ F++M + ++ D SL
Sbjct: 64 CGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSL 123
Query: 65 LPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDK 124
L A L D + IHC +++ + + S L+D+YSK G +G A +F+ L ++
Sbjct: 124 LKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFS--DLGEQ 181
Query: 125 DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLF 184
D+++++A+I+ Y + + A++L +M G+KP+ +T+ +++ SH+ ++ +
Sbjct: 182 DLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEIL 241
Query: 185 QFMLKHHIIPLVDHYTCIIDLL---GRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ M P V +T II L + + DA+ + T + PN A LL AC +
Sbjct: 242 ELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTT 300
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 86/149 (57%), Gaps = 8/149 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + + +F KT KK T +N+++ + ++ LA +A++LF QM + D+ T
Sbjct: 332 MYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLT 391
Query: 61 FNSLLPA--YAILADLKQAMNIHCYLIRSGF--LYRLEVASILVDIYSKCGSLGYAHHIF 116
F ++L A +A L DL Q + + L+++ + + RLE + +VD+ + G L A+ +
Sbjct: 392 FTAILTACSHAGLTDLGQNLFL---LMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMI 448
Query: 117 NIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+ + + D+ +W A++AA HG+ E+A
Sbjct: 449 KAMRM-EPDLFVWGALLAACRNHGNMELA 476
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 224 bits (570), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 114/305 (37%), Positives = 182/305 (59%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y+KC ++ K+F S + WN+++S + N+L +I LF ML + + PD+ +
Sbjct: 520 LYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVS 579
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A + A L + ++H Y +R G + + L+D+Y KCG YA +IF
Sbjct: 580 ITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFK--K 637
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++ K +I W+ +I YG HG A+SLF+EM ++G P+ VTF S++ AC+H G V+EG
Sbjct: 638 MQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEG 697
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
++F+FM + + I P ++HY ++DLLGRAG L++AY+ I+ MPI+ + ++W LL A
Sbjct: 698 KNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASR 757
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
+H NVELG ++A +EPE Y+ L NLY G + K+ ++ E GL K P
Sbjct: 758 THHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGC 817
Query: 300 SLVEV 304
S +EV
Sbjct: 818 SWIEV 822
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 121/227 (53%), Gaps = 4/227 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED--VQPDN 58
+Y+KC C +Y +F +K W +++SG N +EA+++F M +D ++PD+
Sbjct: 417 LYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDS 476
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
S+ A A L L+ + +H +I++G + + V S L+D+YSKCG A +F
Sbjct: 477 DIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFT- 535
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
+ ++++ W+++I+ Y ++ E+++ LFN M+ G+ P+ V+ TSVL A S +
Sbjct: 536 -SMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLL 594
Query: 179 EGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK 225
+G SL + L+ I +ID+ + G A N+ + M K
Sbjct: 595 KGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHK 641
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 120/240 (50%), Gaps = 5/240 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAP-WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
MY K ++++F++ K WN ++ GF + + ++ L+ V+ +
Sbjct: 214 MYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVST 273
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
+F L A + + IHC +++ G V + L+ +YSKCG +G A +F+ +
Sbjct: 274 SFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCV 333
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
DK + IW+A++AAY ++ +G A+ LF M Q V P+ T ++V+ CS +GL +
Sbjct: 334 V--DKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNY 391
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL-GAC 238
G S+ + K I + ++ L + G DAY + ++M K + WG+L+ G C
Sbjct: 392 GKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK-DMVAWGSLISGLC 450
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 89/183 (48%), Gaps = 7/183 (3%)
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN-- 117
TF SLL A + L +L IH ++ G+ Y +A+ LV++Y KCG L YA +F+
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 118 ---IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHV 174
+ +D+ +W+++I Y K + V F M+ GV+P+ + + V+
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 175 GLV--DEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWG 232
G +EG + FML++ + T +ID+ + G DA+ + + K N +W
Sbjct: 182 GNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWN 241
Query: 233 ALL 235
++
Sbjct: 242 VMI 244
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 116/249 (46%), Gaps = 17/249 (6%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAP-------WNAVLSGFIHNSLAREAIQLFKQMLVED 53
MY KC + + ++F S+ ++ WN+++ G+ +E + F++MLV
Sbjct: 104 MYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFG 163
Query: 54 VQPDNATFNSLLPAYAILADLK--QAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGY 111
V+PD + + ++ + + + IH +++R+ + + L+D+Y K G
Sbjct: 164 VRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSID 223
Query: 112 AHHIFNIIPLKDK-DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHA 170
A +F + ++DK ++++W+ +I +G G E ++ L+ + VK +FT L A
Sbjct: 224 AWRVF--VEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGA 281
Query: 171 CSHVGLVDEGLSLFQFMLKHHIIPLVDHYTC--IIDLLGRAGRLDDAYNLIRTMPIKPNH 228
CS G + ++K + D Y C ++ + + G + +A + + +
Sbjct: 282 CSQSENSGFGRQIHCDVVKMGLHN--DPYVCTSLLSMYSKCGMVGEAETVFSCV-VDKRL 338
Query: 229 AVWGALLGA 237
+W A++ A
Sbjct: 339 EIWNAMVAA 347
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 224 bits (570), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 178/305 (58%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y+K N + K+F ++ +K WNA++SG+ N L +AI LF++M + P+ T
Sbjct: 363 VYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVT 422
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L A A L L +H + + F + V++ L+ +Y+KCGS+ A +F+++
Sbjct: 423 ITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT 482
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
K++ + W+ +I+ YG HG G+ A+++F EM+ SG+ P VTF VL+ACSH GLV EG
Sbjct: 483 KKNE--VTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEG 540
Query: 181 LSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+F M+ ++ P V HY C++D+LGRAG L A I M I+P +VW LLGAC
Sbjct: 541 DEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACR 600
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H++ L + FEL+P+N G ++LL+N+++A + VR + L K P
Sbjct: 601 IHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGY 660
Query: 300 SLVEV 304
+L+E+
Sbjct: 661 TLIEI 665
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 115/237 (48%), Gaps = 6/237 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y+KC + +F + K +NA++ G+ N ++ LFK++++ + ++T
Sbjct: 265 LYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSST 324
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
SL+P + L IH Y ++S FL V++ L +YSK + A +F+ P
Sbjct: 325 LVSLVP---VSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESP 381
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+K + W+A+I+ Y ++G E A+SLF EM +S PN VT T +L AC+ +G + G
Sbjct: 382 --EKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLG 439
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+ + + T +I + + G + +A L M K N W ++
Sbjct: 440 KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM-TKKNEVTWNTMISG 495
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 111/226 (49%), Gaps = 7/226 (3%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNATFNSLLPAYAIL 71
K+F + +K T WN ++SG+ N + E+IQ+F+ ++ E + D T +LPA A L
Sbjct: 175 KVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAEL 234
Query: 72 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
+L+ M IH ++G V + + +YSKCG + +F + DI+ ++A
Sbjct: 235 QELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFR--EFRKPDIVAYNA 292
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH 191
+I Y +G E+++SLF E++ SG + T S++ H+ L+ ++ + LK +
Sbjct: 293 MIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSN 349
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+ T + + + ++ A L P K + W A++
Sbjct: 350 FLSHASVSTALTTVYSKLNEIESARKLFDESPEK-SLPSWNAMISG 394
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 224 bits (570), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 112/305 (36%), Positives = 179/305 (58%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YAKC + +F +K W+ ++ G+ NS +E I+LF QML E+++PD +
Sbjct: 256 LYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFS 315
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
L + A L L + R FL L +A+ L+D+Y+KCG++ +F
Sbjct: 316 IVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFK--E 373
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+K+KDI+I +A I+ K+GH +++ ++F + + G+ P+ TF +L C H GL+ +G
Sbjct: 374 MKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDG 433
Query: 181 LSLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
L F + + + V+HY C++DL GRAG LDDAY LI MP++PN VWGALL C
Sbjct: 434 LRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCR 493
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
++ +L E + LEP N GNY+ L+N+Y+ GRW + +VRDM+N+ G++K+P
Sbjct: 494 LVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGY 553
Query: 300 SLVEV 304
S +E+
Sbjct: 554 SWIEL 558
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 123/240 (51%), Gaps = 7/240 (2%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
SY +F T +N++++GF++N L E + LF + + TF +L A
Sbjct: 64 SYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTR 123
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
+ K +++H +++ GF + + + L+ IYS G L AH +F+ IP D+ ++ W+
Sbjct: 124 ASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIP--DRSVVTWT 181
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
A+ + Y G A+ LF +MV+ GVKP+ VL AC HVG +D G + ++M +
Sbjct: 182 ALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEM 241
Query: 191 HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH----ENVEL 246
+ T +++L + G+++ A ++ +M ++ + W ++ S+ E +EL
Sbjct: 242 EMQKNSFVRTTLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMIQGYASNSFPKEGIEL 300
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 107/217 (49%), Gaps = 2/217 (0%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
N ++K+F + + W A+ SG+ + REAI LFK+M+ V+PD+ +L A
Sbjct: 163 NDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSAC 222
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIII 128
+ DL I Y+ V + LV++Y+KCG + A +F+ + +KDI+
Sbjct: 223 VHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFD--SMVEKDIVT 280
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML 188
WS +I Y + + + LF +M+Q +KP+Q + L +C+ +G +D G +
Sbjct: 281 WSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLID 340
Query: 189 KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK 225
+H + + +ID+ + G + + + + M K
Sbjct: 341 RHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEK 377
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 223 bits (568), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 117/304 (38%), Positives = 180/304 (59%), Gaps = 4/304 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC C + + +F +K W ++++G N+ EA+ +QM + +QP+ T
Sbjct: 442 MYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAIT 500
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ L A A + L IH +++R+G + + L+D+Y +CG + A FN
Sbjct: 501 LTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-- 558
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ KD+ W+ ++ Y + G G M V LF+ MV+S V+P+++TF S+L CS +V +G
Sbjct: 559 -QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQG 617
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
L F M + + P + HY C++DLLGRAG L +A+ I+ MP+ P+ AVWGALL AC
Sbjct: 618 LMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRI 677
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H ++LGE++A+ FEL+ ++ G YILL NLYA G+WR+V KVR M+ E GL S
Sbjct: 678 HHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCS 737
Query: 301 LVEV 304
VEV
Sbjct: 738 WVEV 741
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 122/237 (51%), Gaps = 3/237 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + +F + ++ WNA++SG+ N + E ++LF M V PD T
Sbjct: 240 MYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMT 299
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S++ A +L D + +IH Y+I +GF + V + L +Y GS A +F+
Sbjct: 300 LTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFS--R 357
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++ KDI+ W+ +I+ Y + + A+ + M Q VKP+++T +VL AC+ +G +D G
Sbjct: 358 MERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG 417
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+ L + +K +I V +I++ + +D A ++ +P + N W +++
Sbjct: 418 VELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAG 473
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 127/277 (45%), Gaps = 39/277 (14%)
Query: 8 GNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQML-VEDVQPDNATFNSL 64
GNL ++ +F K S++ WN ++ G+ EA+ L+ +ML V V+PD TF +
Sbjct: 143 GNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCV 202
Query: 65 LPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDK 124
L + DL + +H +++R G+ ++V + L+ +Y KCG + A +F+ +P +
Sbjct: 203 LRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMP--RR 260
Query: 125 DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLF 184
DII W+A+I+ Y ++G + LF M V P+ +T TSV+ AC +G G +
Sbjct: 261 DIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIH 320
Query: 185 QFMLKHHI---IPLVDHYTCII----------DLLGRAGRLD------------------ 213
+++ I + + T + L R R D
Sbjct: 321 AYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPD 380
Query: 214 ---DAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 247
D Y ++ +KP+ A+L AC + +++ G
Sbjct: 381 KAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG 417
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 223 bits (568), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 180/304 (59%), Gaps = 3/304 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YA+C ++S K+F +K WNA++ G + ++A+ LF++M + +PD T
Sbjct: 333 YARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITM 392
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
L A + L L + IH Y+ + + + + LVD+Y+KCG++ A +F+ I
Sbjct: 393 IHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGI-- 450
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
+ ++ + ++AII HG A+S FNEM+ +G+ P+++TF +L AC H G++ G
Sbjct: 451 QTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGR 510
Query: 182 SLF-QFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
F Q + ++ P + HY+ ++DLLGRAG L++A L+ +MP++ + AVWGALL C
Sbjct: 511 DYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRM 570
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H NVELGE AA+ EL+P ++G Y+LL +Y W D ++ R M+NE G+ K+P S
Sbjct: 571 HGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCS 630
Query: 301 LVEV 304
+EV
Sbjct: 631 SIEV 634
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 134/270 (49%), Gaps = 30/270 (11%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
M+A C + K+F ++ + WN +++G+ A +AI ++K M E V+PD+ T
Sbjct: 200 MFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVT 259
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
L+ + ++L DL + + Y+ +G + + + L+D++SKCG + A IF+ +
Sbjct: 260 MIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLE 319
Query: 121 -----------------------------LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNE 151
+++KD+++W+A+I + G+ A++LF E
Sbjct: 320 KRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQE 379
Query: 152 MVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGR 211
M S KP+++T L ACS +G +D G+ + +++ K+ + V T ++D+ + G
Sbjct: 380 MQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGN 439
Query: 212 LDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
+ +A ++ + + N + A++G H
Sbjct: 440 ISEALSVFHGIQTR-NSLTYTAIIGGLALH 468
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 127/275 (46%), Gaps = 48/275 (17%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVE---DVQPDNATFNSLLPAYAILADLKQAMNIHC 82
WN + GF + +E+ L+KQML + +PD+ T+ L + + ADL+ + H
Sbjct: 121 WNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVL---FKVCADLRLSSLGH- 176
Query: 83 YLIRSGFLYRLEVASIL----VDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGK 138
++ RLE+ S + + +++ CG + A +F+ P++D ++ W+ +I Y K
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRD--LVSWNCLINGYKK 234
Query: 139 HGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI---IPL 195
G E A+ ++ M GVKP+ VT ++ +CS +G ++ G ++++ ++ + IPL
Sbjct: 235 IGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPL 294
Query: 196 VD----------------------------HYTCIIDLLGRAGRLDDAYNLIRTMPIKPN 227
V+ +T +I R G LD + L M K +
Sbjct: 295 VNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK-D 353
Query: 228 HAVWGALLGACVSHENVELGEVAARWTFELEPENT 262
+W A++G V + G+ A E++ NT
Sbjct: 354 VVLWNAMIGGSV---QAKRGQDALALFQEMQTSNT 385
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Query: 1 MYAKCNCGNLSYKM--FMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
MYAKC GN+S + F + + + A++ G + A AI F +M+ + PD
Sbjct: 433 MYAKC--GNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDE 490
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLY--RLEVASILVDIYSKCGSLGYAHHIF 116
TF LL A + Q + ++S F +L+ SI+VD+ + G L A +
Sbjct: 491 ITFIGLLSA-CCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLM 549
Query: 117 NIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+P+ + D +W A++ HG+ E+
Sbjct: 550 ESMPM-EADAAVWGALLFGCRMHGNVELG 577
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 223 bits (568), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 109/292 (37%), Positives = 172/292 (58%), Gaps = 3/292 (1%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F + +K W ++SG N E ++LF M E +P + F+ + + A+L
Sbjct: 373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
H L++ GF L + L+ +Y+KCG + A +F +P D + W+A+I
Sbjct: 433 YCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDS--VSWNALI 490
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK-HHI 192
AA G+HGHG AV ++ EM++ G++P+++T +VL ACSH GLVD+G F M + I
Sbjct: 491 AALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRI 550
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAAR 252
P DHY +IDLL R+G+ DA ++I ++P KP +W ALL C H N+ELG +AA
Sbjct: 551 PPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAAD 610
Query: 253 WTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
F L PE+ G Y+LL+N++AA G+W +V +VR ++ + G++K A S +E+
Sbjct: 611 KLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEM 662
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 144/293 (49%), Gaps = 44/293 (15%)
Query: 21 KRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA-DLKQAMN 79
+ T +NA+++GF HN+ AI LF +M E +PDN TF S+L A++A D KQ +
Sbjct: 111 RDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQ 170
Query: 80 IHCYLIRSGFLYRLEVASILVDIYSKCGS----LGYAHHIFNIIPLKDK----------- 124
H ++SG Y V++ LV +YSKC S L A +F+ I KD+
Sbjct: 171 FHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYV 230
Query: 125 -------------------DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFT 165
++ ++A+I+ Y G + A+ + MV SG++ ++ T+
Sbjct: 231 KNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYP 290
Query: 166 SVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHY-TCIIDLLGRAGRLDDAYNLIRTMPI 224
SV+ AC+ GL+ G + ++L+ H+ ++ L + G+ D+A + MP
Sbjct: 291 SVIRACATAGLLQLGKQVHAYVLRREDFSF--HFDNSLVSLYYKCGKFDEARAIFEKMPA 348
Query: 225 KPNHAVWGALLGACVSHENVELGEVAARWTF-ELEPENTGNYILLANLYAAVG 276
K + W ALL VS ++ GE A+ F E++ +N +++++ + A G
Sbjct: 349 K-DLVSWNALLSGYVSSGHI--GE--AKLIFKEMKEKNILSWMIMISGLAENG 396
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 112/246 (45%), Gaps = 33/246 (13%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+NA++SG+++ +EA+++ ++M+ ++ D T+ S++ A A L+ +H Y++
Sbjct: 254 YNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVL 313
Query: 86 -RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--------------------- 123
R F + + + LV +Y KCG A IF +P KD
Sbjct: 314 RREDFSFHFD--NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAK 371
Query: 124 --------KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVG 175
K+I+ W +I+ ++G GE + LF+ M + G +P F+ + +C+ +G
Sbjct: 372 LIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLG 431
Query: 176 LVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
G +LK + +I + + G +++A + RTMP + W AL+
Sbjct: 432 AYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALI 490
Query: 236 GACVSH 241
A H
Sbjct: 491 AALGQH 496
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 31/126 (24%)
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDK--------- 124
L+ A +H +I GF R + + L+D+Y K L YA +F+ I DK
Sbjct: 30 LQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSG 89
Query: 125 ----------------------DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQV 162
D ++++A+I + + G A++LF +M G KP+
Sbjct: 90 YCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNF 149
Query: 163 TFTSVL 168
TF SVL
Sbjct: 150 TFASVL 155
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 68/150 (45%), Gaps = 8/150 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + ++F + WNA+++ + EA+ ++++ML + ++PD T
Sbjct: 461 MYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRIT 520
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVA----SILVDIYSKCGSLGYAHHIF 116
++L A + + Q Y +YR+ + L+D+ + G A +
Sbjct: 521 LLTVLTACSHAGLVDQGRK---YFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVI 577
Query: 117 NIIPLKDKDIIIWSAIIAAYGKHGHGEMAV 146
+P K IW A+++ HG+ E+ +
Sbjct: 578 ESLPFK-PTAEIWEALLSGCRVHGNMELGI 606
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 223 bits (568), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 123/303 (40%), Positives = 178/303 (58%), Gaps = 2/303 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + KMF + ++ W+ ++ G+ EA+ LFK+ L E++ ++ +
Sbjct: 160 MYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYS 219
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F+S++ A L+ IH I+S F V S LV +YSKCG A+ +FN +P
Sbjct: 220 FSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVP 279
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+K+ + IW+A++ AY +H H + + LF M SG+KPN +TF +VL+ACSH GLVDEG
Sbjct: 280 VKN--LGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEG 337
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
F M + I P HY ++D+LGRAGRL +A +I MPI P +VWGALL +C
Sbjct: 338 RYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTV 397
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H+N EL AA FEL P ++G +I L+N YAA GR+ D K R ++ + G +K S
Sbjct: 398 HKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLS 457
Query: 301 LVE 303
VE
Sbjct: 458 WVE 460
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 127/245 (51%), Gaps = 3/245 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
Y+K S + F + +K + W++++S F N L +++ K+M+ +++PD+
Sbjct: 59 FYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHV 118
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S + AIL+ ++HC +++G+ + V S LVD+Y+KCG + YA +F+ +P
Sbjct: 119 LPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMP 178
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++++ WS ++ Y + G E A+ LF E + + N +F+SV+ C++ L++ G
Sbjct: 179 --QRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELG 236
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ +K + ++ L + G + AY + +P+K N +W A+L A
Sbjct: 237 RQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVK-NLGIWNAMLKAYAQ 295
Query: 241 HENVE 245
H + +
Sbjct: 296 HSHTQ 300
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 223 bits (567), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 113/310 (36%), Positives = 193/310 (62%), Gaps = 8/310 (2%)
Query: 1 MYAKCNCGNLSYKMFMKT--SKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
MY+K +S K+F + +++ A WN+++SG+ N + +F++ML ++++P+
Sbjct: 462 MYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNA 521
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
T S+LPA + + + +H + IR + VAS LVD+YSK G++ YA +F+
Sbjct: 522 VTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFS- 580
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
K+++ + ++ +I YG+HG GE A+SLF M +SG+KP+ +TF +VL ACS+ GL+D
Sbjct: 581 -QTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLID 639
Query: 179 EGLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHA-VWGALLG 236
EGL +F+ M + ++I P +HY CI D+LGR GR+++AY ++ + + N A +WG+LLG
Sbjct: 640 EGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLG 699
Query: 237 ACVSHENVELGEVAARW--TFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLR 294
+C H +EL E + F+ +G +LL+N+YA +W+ V+KVR + E GL+
Sbjct: 700 SCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLK 759
Query: 295 KLPAQSLVEV 304
K +S +E+
Sbjct: 760 KEVGRSGIEI 769
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 117/219 (53%), Gaps = 1/219 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY++C + S+ +F+ ++ WN ++S F+ N L E + L +M + + D T
Sbjct: 362 MYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYIT 421
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+LL A + L + + H +LIR G + + S L+D+YSK G + + +F
Sbjct: 422 VTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGSG 480
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++D W+++I+ Y ++GH E +F +M++ ++PN VT S+L ACS +G VD G
Sbjct: 481 YAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLG 540
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLI 219
L F ++ ++ V + ++D+ +AG + A ++
Sbjct: 541 KQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMF 579
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 120/265 (45%), Gaps = 33/265 (12%)
Query: 5 CNCGN--LSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQP----DN 58
C GN L+ ++F K T WN ++ GFI N+L EA+ + +M + P D
Sbjct: 50 CQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRM--KKTAPFTNCDA 107
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIY------SKCGSLGYA 112
T++S L A A +LK +HC+LIR V + L+++Y C
Sbjct: 108 YTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVV 167
Query: 113 HHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACS 172
+F+ ++ K+++ W+ +I+ Y K G A F M++ VKP+ V+F +V A S
Sbjct: 168 RKVFD--NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVS 225
Query: 173 HVGLVDEGLSLFQFMLKHHIIPLVDHY-------TCIIDLLGRAGRLDDAYNLIRTMPIK 225
+ + + MLK L D Y + I + G ++ + + + ++
Sbjct: 226 ISRSIKKANVFYGLMLK-----LGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSC-VE 279
Query: 226 PNHAVWGALLGACVSH----ENVEL 246
N VW ++G V + E++EL
Sbjct: 280 RNIEVWNTMIGVYVQNDCLVESIEL 304
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 123/247 (49%), Gaps = 5/247 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQML-VEDVQPDNA 59
MYA+ S ++F ++ WN ++ ++ N E+I+LF + + +++ D
Sbjct: 260 MYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEV 319
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T+ A + L ++ H ++ ++ + + + L+ +YS+CGS+ + +F +
Sbjct: 320 TYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVF--L 377
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
++++D++ W+ +I+A+ ++G + + L EM + G K + +T T++L A S++ +
Sbjct: 378 SMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEI 437
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIR-TMPIKPNHAVWGALLGAC 238
G F+++ I + +ID+ ++G + + L + + + A W +++
Sbjct: 438 GKQTHAFLIRQG-IQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGY 496
Query: 239 VSHENVE 245
+ + E
Sbjct: 497 TQNGHTE 503
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 131/275 (47%), Gaps = 12/275 (4%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F +K WN ++S ++ EA + F M+ +V+P +F ++ PA +I
Sbjct: 169 KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISR 228
Query: 73 DLKQAMNIHCYLIRSG--FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
+K+A + +++ G ++ L V S + +Y++ G + + +F+ +++I +W+
Sbjct: 229 SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFD--SCVERNIEVWN 286
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSG-VKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK 189
+I Y ++ ++ LF E + S + ++VT+ A S + V+ G F+ K
Sbjct: 287 TMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSK 346
Query: 190 H-HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGE 248
+ +P+V + ++ + R G + ++ + +M + + W ++ A V + L +
Sbjct: 347 NFRELPIVIVNSLMV-MYSRCGSVHKSFGVFLSMRER-DVVSWNTMISAFVQN---GLDD 401
Query: 249 VAARWTFELEPENTG-NYILLANLYAAVGRWRDVE 282
+E++ + +YI + L +A R+ E
Sbjct: 402 EGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKE 436
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 182/291 (62%), Gaps = 3/291 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
++F +K W A++S F+ N EA+ F +ML ++V P++ TF+S+L A A LA
Sbjct: 393 ELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLA 452
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
DL + + IH +++ + L V + LV +Y KCG+ A+ IF+ I + +I+ ++ +
Sbjct: 453 DLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS--EPNIVSYNTM 510
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK-HH 191
I+ Y +G G+ A+ LF+ + SG +PN VTF ++L AC HVG VD G F+ M ++
Sbjct: 511 ISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYN 570
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
I P DHY C++DLLGR+G LDDA NLI TMP KP+ VWG+LL A +H V+L E+AA
Sbjct: 571 IEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAA 630
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLV 302
+ ELEP++ Y++L+ LY+ +G+ RD +++ ++ ++K P S +
Sbjct: 631 KKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWI 681
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 121/296 (40%), Gaps = 64/296 (21%)
Query: 5 CNCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNATF 61
C G + + +F + +++ W A++ G+ + LF +M E DV+ ++ T
Sbjct: 219 CKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTL 278
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+ A ++ IH + R + L + + L+ +YSK G +G A +F ++
Sbjct: 279 AVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKN 338
Query: 122 KD-----------------------------KDIIIWS---------------------- 130
KD KD++ W+
Sbjct: 339 KDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMM 398
Query: 131 ---------AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
A+I+A+ +G+ E A+ F++M+Q V PN TF+SVL A + + + EGL
Sbjct: 399 PEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGL 458
Query: 182 SLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+ ++K +I+ + ++ + + G +DAY + + +PN + ++
Sbjct: 459 QIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS-EPNIVSYNTMISG 513
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 103/244 (42%), Gaps = 35/244 (14%)
Query: 8 GNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLL 65
GNL + +F + S + W A++S + N +A Q+F +M V NA +++
Sbjct: 64 GNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMI 123
Query: 66 -------PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
AY + D+ + + + +GF+ + G A ++
Sbjct: 124 KNKCDLGKAYELFCDIPEKNAVSYATMITGFV--------------RAGRFDEAEFLYAE 169
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
P+K +D + + +++ Y + G AV +F M V V+ +S++H +G +
Sbjct: 170 TPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEV----VSCSSMVHGYCKMGRIV 225
Query: 179 EGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM----PIKPNHAVWGAL 234
+ SLF M + ++I +T +ID +AG +D + L M +K N +
Sbjct: 226 DARSLFDRMTERNVIT----WTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVM 281
Query: 235 LGAC 238
AC
Sbjct: 282 FKAC 285
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 80/175 (45%), Gaps = 26/175 (14%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC N +YK+F S+ +N ++SG+ +N ++A++LF + +P+ T
Sbjct: 482 MYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVT 541
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVAS------------ILVDIYSKCGS 108
F +LL A +H + G+ Y + S +VD+ + G
Sbjct: 542 FLALLSAC-----------VHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGL 590
Query: 109 LGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVT 163
L A ++ + +P K +W ++++A H ++A ++++ ++P+ T
Sbjct: 591 LDDASNLISTMPCKPHS-GVWGSLLSASKTHLRVDLAELAAKKLIE--LEPDSAT 642
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 174/293 (59%), Gaps = 2/293 (0%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
++F + + W+ ++ G HN E+ F+++ + P+ + +L A +
Sbjct: 224 RIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSG 283
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
+ +H ++ ++G+ + + V + L+D+YS+CG++ A +F + K + I+ W+++
Sbjct: 284 SFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEK-RCIVSWTSM 342
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK-HH 191
IA HG GE AV LFNEM GV P+ ++F S+LHACSH GL++EG F M + +H
Sbjct: 343 IAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYH 402
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
I P ++HY C++DL GR+G+L AY+ I MPI P VW LLGAC SH N+EL E
Sbjct: 403 IEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVK 462
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
+ EL+P N+G+ +LL+N YA G+W+DV +R + ++K A SLVEV
Sbjct: 463 QRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEV 515
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 111/290 (38%), Gaps = 68/290 (23%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNATFNSLLPAYAILADLKQAMNIHCYL 84
+N ++ G+ + ++ +F +M+ + V PD+ +F ++ A L+ +HC
Sbjct: 73 FNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQA 132
Query: 85 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII----------- 133
++ G L V + L+ +Y CG + +A +F+ + +++ W+A+I
Sbjct: 133 LKHGLESHLFVGTTLIGMYGGCGCVEFARKVFD--EMHQPNLVAWNAVITACFRGNDVAG 190
Query: 134 --------------------AAYGKHGHGEMAVSLFNEM--------------------- 152
A Y K G E A +F+EM
Sbjct: 191 AREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSF 250
Query: 153 ----------VQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCI 202
++G+ PN+V+ T VL ACS G + G L F+ K +V +
Sbjct: 251 NESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNAL 310
Query: 203 IDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAAR 252
ID+ R G + A + M K W +++ H GE A R
Sbjct: 311 IDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQ---GEEAVR 357
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 222 bits (566), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 122/309 (39%), Positives = 181/309 (58%), Gaps = 8/309 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKR--TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQ--P 56
MYAKC + + MF S K W ++ G+ + A +A++L +M ED Q P
Sbjct: 416 MYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRP 475
Query: 57 DNATFNSLLPAYAILADLKQAMNIHCYLIRSGF-LYRLEVASILVDIYSKCGSLGYAHHI 115
+ T + L A A LA L+ IH Y +R+ L V++ L+D+Y+KCGS+ A +
Sbjct: 476 NAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLV 535
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVG 175
F+ + K++ + W++++ YG HG+GE A+ +F+EM + G K + VT VL+ACSH G
Sbjct: 536 FDNMMAKNE--VTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSG 593
Query: 176 LVDEGLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGAL 234
++D+G+ F M + P +HY C++DLLGRAGRL+ A LI MP++P VW A
Sbjct: 594 MIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAF 653
Query: 235 LGACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLR 294
L C H VELGE AA EL + G+Y LL+NLYA GRW+DV ++R ++ G++
Sbjct: 654 LSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVK 713
Query: 295 KLPAQSLVE 303
K P S VE
Sbjct: 714 KRPGCSWVE 722
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 113/234 (48%), Gaps = 13/234 (5%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
KM + K W+A +SG+ L EA+ + +QML ++P+ T S+L A +
Sbjct: 320 KMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVG 379
Query: 73 DLKQAMNIHCYLIRSGFLYRLE-------VASILVDIYSKCGSLGYAHHIFNIIPLKDKD 125
L IHCY I+ R V + L+D+Y+KC + A +F+ + K++D
Sbjct: 380 ALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERD 439
Query: 126 IIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG--VKPNQVTFTSVLHACSHVGLVDEGLSL 183
++ W+ +I Y +HG A+ L +EM + +PN T + L AC+ + + G +
Sbjct: 440 VVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQI 499
Query: 184 FQFMLK--HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ L+ + +PL C+ID+ + G + DA + M K N W +L+
Sbjct: 500 HAYALRNQQNAVPLFVS-NCLIDMYAKCGSISDARLVFDNMMAK-NEVTWTSLM 551
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 130/283 (45%), Gaps = 42/283 (14%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNA 59
MY++C + + K+F + S WN+++ + + A+++F +M E +PDN
Sbjct: 171 MYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNI 230
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T ++LP A L +HC+ + S + + V + LVD+Y+KCG + A+ +F+ +
Sbjct: 231 TLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM 290
Query: 120 PLKD---------------------------------KDIIIWSAIIAAYGKHGHGEMAV 146
+KD D++ WSA I+ Y + G G A+
Sbjct: 291 SVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEAL 350
Query: 147 SLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHY------- 199
+ +M+ SG+KPN+VT SVL C+ VG + G + + +K+ I + +
Sbjct: 351 GVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVI 410
Query: 200 TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAV-WGALLGACVSH 241
+ID+ + ++D A + ++ K V W ++G H
Sbjct: 411 NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQH 453
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 109/213 (51%), Gaps = 4/213 (1%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
WN+++ + N A + + LF M PDN TF + A ++ ++ + H +
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSL 154
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+GF+ + V + LV +YS+C SL A +F+ + + D++ W++II +Y K G ++A
Sbjct: 155 VTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSV--WDVVSWNSIIESYAKLGKPKVA 212
Query: 146 VSLFNEMVQS-GVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIID 204
+ +F+ M G +P+ +T +VL C+ +G G L F + +I + C++D
Sbjct: 213 LEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVD 272
Query: 205 LLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+ + G +D+A + M +K + W A++
Sbjct: 273 MYAKCGMMDEANTVFSNMSVK-DVVSWNAMVAG 304
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 76/196 (38%), Gaps = 15/196 (7%)
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
+ Q IH L+ G L L + S L+ Y G L +A + P D + W+++I
Sbjct: 41 ISQVKLIHQKLLSFGIL-TLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLI 99
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII 193
+YG +G + LF M P+ TF V AC + V G S L I
Sbjct: 100 RSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFI 159
Query: 194 PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG------ 247
V ++ + R L DA + M +VW + + +LG
Sbjct: 160 SNVFVGNALVAMYSRCRSLSDARKVFDEM------SVWDVVSWNSIIESYAKLGKPKVAL 213
Query: 248 EVAARWT--FELEPEN 261
E+ +R T F P+N
Sbjct: 214 EMFSRMTNEFGCRPDN 229
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 222 bits (566), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/306 (39%), Positives = 171/306 (55%), Gaps = 7/306 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY +C + K+F S WN V+S N RE QLF+ + +E P+ T
Sbjct: 625 MYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLE---PNEIT 681
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F LL A L M HC+LIR GF V++ LVD+YS CG L +F
Sbjct: 682 FVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSG 741
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSVLHACSHVGLVDE 179
+ I W+++I+A+G HG GE A+ LF E+ S ++PN+ +F S+L ACSH G +DE
Sbjct: 742 VNS--ISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDE 799
Query: 180 GLSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
GLS ++ M K + P+ +H I+D+LGRAG+L +AY I + VWGALL AC
Sbjct: 800 GLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSAC 859
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H + +LG+ A FE+EP+N YI LAN Y +G W + ++R MV + L+KLP
Sbjct: 860 NYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPG 919
Query: 299 QSLVEV 304
S+++V
Sbjct: 920 YSVIDV 925
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 111/244 (45%), Gaps = 25/244 (10%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQML-VEDVQPDNA 59
MY+KC + +F + + NA+L+GF N + EA + QM V+ +QPD A
Sbjct: 335 MYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIA 394
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYR-LEVASILVDIYSKCGSLGYAHHIFNI 118
T S+ L+ ++ +H Y +R R LEV + ++D+Y KCG A +F
Sbjct: 395 TVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKT 454
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ--SGVKPNQVTFTSVLHACSHVGL 176
+D++ W+++I+A+ ++G A +LF E+V S K + T ++L +C
Sbjct: 455 TT--HRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDS 512
Query: 177 VDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG 236
+ G S+ ++ K G L A+ + TM + W +++
Sbjct: 513 LIFGKSVHCWLQK-------------------LGDLTSAFLRLETMSETRDLTSWNSVIS 553
Query: 237 ACVS 240
C S
Sbjct: 554 GCAS 557
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 114/241 (47%), Gaps = 7/241 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YAK + + +F + WN +++ + N R+++Q FK M + D T
Sbjct: 232 LYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVT 291
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFL--YRLEVASILVDIYSKCGSLGYAHHIFNI 118
F+ ++ A + + +L ++H +I+SG+ + V + ++ +YSKCG A +F
Sbjct: 292 FSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFE- 350
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSVLHACSHVGLV 177
L +D+I +AI+ + +G E A + N+M ++P+ T S+ C +
Sbjct: 351 -ELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFS 409
Query: 178 DEGLSLFQFMLKHHIIP-LVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG 236
EG ++ + ++ + ++ +ID+ G+ G A L +T + + W +++
Sbjct: 410 REGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHR-DLVSWNSMIS 468
Query: 237 A 237
A
Sbjct: 469 A 469
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 4/211 (1%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F + +K WN++++ N A+ LF +M+ + + D+ T A + L
Sbjct: 144 LFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHL 203
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
++ +HC I +G + + + L+++Y+K +L A +F ++ +DI+ W+ I+
Sbjct: 204 SRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFT--HMEHRDIVSWNTIM 261
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII 193
+GH ++ F M SG + + VTF+ V+ ACS + + G SL ++K
Sbjct: 262 TKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYS 321
Query: 194 PL--VDHYTCIIDLLGRAGRLDDAYNLIRTM 222
P V II + + G + A + +
Sbjct: 322 PEAHVSVGNSIISMYSKCGDTEAAETVFEEL 352
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 15/154 (9%)
Query: 8 GNLSYKMFMKTSKKR--TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF---N 62
G S F K KR T+ + ++ +HN LF ++ + + ++F
Sbjct: 40 GYCSNYYFSKRKHKRHFTSSVLSPVTPIVHN--------LFDELPERENRTMESSFMFLR 91
Query: 63 SLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK 122
+L ++ + + + ++HC+ ++ G L L +S L+ Y + G L + +F+ LK
Sbjct: 92 DVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFD--ELK 149
Query: 123 DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG 156
+KD+I+W+++I A ++G AV LF EM+ G
Sbjct: 150 EKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKG 183
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 126/325 (38%), Gaps = 83/325 (25%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + +F T+ + WN+++S F N +A LFK+++ E + +
Sbjct: 438 MYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSE----YSCS 493
Query: 61 FNSLLPAYAILADLKQA------MNIHCYL-----IRSGFLYRLEVASILVDIYSKCGSL 109
SL AIL + ++HC+L + S FL RLE S
Sbjct: 494 KFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFL-RLETMS------------ 540
Query: 110 GYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG-VKPNQVTFTSVL 168
+ +D+ W+++I+ GH ++ F M + G ++ + +T +
Sbjct: 541 ------------ETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTI 588
Query: 169 HACSHVGLVDEG----------LSLFQFMLKHHII---------------------PLVD 197
A ++GLV +G L L++ +I P +
Sbjct: 589 SASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLC 648
Query: 198 HYTCIIDLLG--RAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVA----A 251
+ C+I L +AGR + + L R + ++PN + LL A + G A
Sbjct: 649 SWNCVISALSQNKAGR--EVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLI 706
Query: 252 RWTFELEPENTGNYILLANLYAAVG 276
R F+ P + L ++Y++ G
Sbjct: 707 RRGFQANPFVSA---ALVDMYSSCG 728
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 222 bits (566), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/306 (37%), Positives = 174/306 (56%), Gaps = 4/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + +F ++ WN++++G+ N A EA+ +F ML + PD T
Sbjct: 260 MYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVT 319
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S++ A I + +IH Y+ ++GF+ + LV++Y+K G A F
Sbjct: 320 FLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFE--D 377
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG-VKPNQVTFTSVLHACSHVGLVDE 179
L+ KD I W+ +I HGHG A+S+F M + G P+ +T+ VL+ACSH+GLV+E
Sbjct: 378 LEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEE 437
Query: 180 GLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G F M H + P V+HY C++D+L RAGR ++A L++TMP+KPN +WGALL C
Sbjct: 438 GQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGC 497
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
HEN+EL + E E +G Y+LL+N+YA GRW DV+ +R+ + + K+
Sbjct: 498 DIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLG 557
Query: 299 QSLVEV 304
S VE
Sbjct: 558 HSSVET 563
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 119/249 (47%), Gaps = 11/249 (4%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY C N ++F + W +++SGF++N+ +AI+ F++M V+ +
Sbjct: 151 MYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETI 210
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGF--------LYRLEVASILVDIYSKCGSLGYA 112
LL A D+ H +L GF + + +A+ L+D+Y+KCG L A
Sbjct: 211 MVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTA 270
Query: 113 HHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACS 172
++F+ +P ++ ++ W++II Y ++G E A+ +F +M+ G+ P++VTF SV+ A
Sbjct: 271 RYLFDGMP--ERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASM 328
Query: 173 HVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWG 232
G G S+ ++ K + ++++ + G + A + K + W
Sbjct: 329 IQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLE-KKDTIAWT 387
Query: 233 ALLGACVSH 241
++ SH
Sbjct: 388 VVIIGLASH 396
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 103/225 (45%), Gaps = 12/225 (5%)
Query: 9 NLSY--KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLP 66
NLSY +F WN+++ G+ ++ +A+ +++ML + PD TF +L
Sbjct: 56 NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLK 115
Query: 67 AYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDI 126
A + L D++ +H +++++GF + V++ L+ +Y CG + Y +F IP ++
Sbjct: 116 ACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIP--QWNV 173
Query: 127 IIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQF 186
+ W ++I+ + + A+ F EM +GVK N+ +L AC + G F
Sbjct: 174 VAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGF 233
Query: 187 MLKHHIIPLVDHY--------TCIIDLLGRAGRLDDAYNLIRTMP 223
+ P T +ID+ + G L A L MP
Sbjct: 234 LQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMP 278
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 222 bits (565), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 170/295 (57%), Gaps = 3/295 (1%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
+YK+F + ++ W A++SGF ++L+ +M P++ TF +LL A
Sbjct: 174 AYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTG 233
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
L Q ++HC + G L +++ L+ +Y KCG L A IF+ +KD++ W+
Sbjct: 234 SGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFD--QFSNKDVVSWN 291
Query: 131 AIIAAYGKHGHGEMAVSLFNEMV-QSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK 189
++IA Y +HG A+ LF M+ +SG KP+ +T+ VL +C H GLV EG F M +
Sbjct: 292 SMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAE 351
Query: 190 HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEV 249
H + P ++HY+C++DLLGR G L +A LI MP+KPN +WG+LL +C H +V G
Sbjct: 352 HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIR 411
Query: 250 AARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
AA LEP+ ++ LANLYA+VG W++ VR ++ + GL+ P S +E+
Sbjct: 412 AAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEI 466
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 103/206 (50%), Gaps = 12/206 (5%)
Query: 45 LFKQMLVED----VQPDNATFNSLLPAYAILA-----DLKQAMNIHCYLIRSGFLYRLEV 95
+ +++++ED V+ D +F++ + A+ + D + HC ++ GF+ + +
Sbjct: 98 VLEEVMLEDSSSSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYL 157
Query: 96 ASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS 155
S LV +Y G + A+ +F +P +++++ W+A+I+ + + ++ + L+++M +S
Sbjct: 158 GSSLVVLYRDSGEVENAYKVFEEMP--ERNVVSWTAMISGFAQEWRVDICLKLYSKMRKS 215
Query: 156 GVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDA 215
PN TFT++L AC+ G + +G S+ L + + +I + + G L DA
Sbjct: 216 TSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDA 275
Query: 216 YNLIRTMPIKPNHAVWGALLGACVSH 241
+ + K + W +++ H
Sbjct: 276 FRIFDQFSNK-DVVSWNSMIAGYAQH 300
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 5 CNCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNATF 61
C CG+L ++++F + S K WN++++G+ + LA +AI+LF+ M+ + +PD T+
Sbjct: 267 CKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITY 326
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+L + +K+ + G L S LVD+ + G L A + +P+
Sbjct: 327 LGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPM 386
Query: 122 KDKDIIIWSAIIAAYGKHG 140
K + +IW +++ + HG
Sbjct: 387 K-PNSVIWGSLLFSCRVHG 404
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 221 bits (564), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 175/298 (58%), Gaps = 4/298 (1%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLV-EDVQPDNATFNSLLPA 67
+ +++ F +K WN ++SG + SL EAI++F M E V D T S+ A
Sbjct: 420 DAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASA 479
Query: 68 YAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDII 127
L L A I+ Y+ ++G + + + LVD++S+CG A IFN L ++D+
Sbjct: 480 CGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFN--SLTNRDVS 537
Query: 128 IWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM 187
W+A I A G+ E A+ LF++M++ G+KP+ V F L ACSH GLV +G +F M
Sbjct: 538 AWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSM 597
Query: 188 LK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 246
LK H + P HY C++DLLGRAG L++A LI MP++PN +W +LL AC NVE+
Sbjct: 598 LKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEM 657
Query: 247 GEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
AA L PE TG+Y+LL+N+YA+ GRW D+ KVR + E GLRK P S +++
Sbjct: 658 AAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQI 715
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 134/261 (51%), Gaps = 10/261 (3%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLV-EDVQPDNAT 60
YA+C + + K+F + S++ W +++ G+ A++A+ LF +M+ E+V P++ T
Sbjct: 179 YAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVT 238
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
++ A A L DL+ ++ ++ SG + S LVD+Y KC ++ A +F+
Sbjct: 239 MVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYG 298
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ D+ +A+ + Y + G A+ +FN M+ SGV+P++++ S + +CS + + G
Sbjct: 299 ASNLDLC--NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWG 356
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
S ++L++ + +ID+ + R D A+ + M K W +++
Sbjct: 357 KSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK-TVVTWNSIVAG--- 412
Query: 241 HENVELGEVAARW-TFELEPE 260
VE GEV A W TFE PE
Sbjct: 413 --YVENGEVDAAWETFETMPE 431
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 119/254 (46%), Gaps = 34/254 (13%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KCN +++ ++F + NA+ S ++ L REA+ +F M+ V+PD +
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S + + + L ++ + H Y++R+GF + + L+D+Y KC A IF+
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD--R 397
Query: 121 LKDKDIIIWSAIIAAYGKHGH------------------------GEMAVSLFNEMV--- 153
+ +K ++ W++I+A Y ++G G + SLF E +
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457
Query: 154 -----QSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGR 208
Q GV + VT S+ AC H+G +D ++ ++ K+ I V T ++D+ R
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSR 517
Query: 209 AGRLDDAYNLIRTM 222
G + A ++ ++
Sbjct: 518 CGDPESAMSIFNSL 531
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 11/199 (5%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N+++ G+ + L EAI LF +M+ + PD TF L A A + IH ++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+ G+ L V + LV Y++CG L A +F+ + +++++ W+++I Y + + A
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFD--EMSERNVVSWTSMICGYARRDFAKDA 219
Query: 146 VSLFNEMVQS-GVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI-------IPLVD 197
V LF MV+ V PN VT V+ AC+ + ++ G ++ F+ I LVD
Sbjct: 220 VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVD 279
Query: 198 HYTCIIDLLGRAGRLDDAY 216
Y + + A RL D Y
Sbjct: 280 MYM-KCNAIDVAKRLFDEY 297
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
M+++C + +F + + + W A + A AI+LF M+ + ++PD
Sbjct: 514 MFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVA 573
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEV-ASILVDIYSKCGSLGYAHHIFNII 119
F L A + ++Q I +++ + +V +VD+ + G L A + +
Sbjct: 574 FVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDM 633
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMA 145
P++ D +IW++++AA G+ EMA
Sbjct: 634 PMEPND-VIWNSLLAACRVQGNVEMA 658
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 221 bits (564), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 114/307 (37%), Positives = 183/307 (59%), Gaps = 6/307 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNA 59
MY KC + + ++F + KK WN+++SG +H ++EAI LF M ++PD
Sbjct: 248 MYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGH 307
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
S+L A A L + +H Y++ +G + + + +VD+Y+KCG + A IFN I
Sbjct: 308 ILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGI 367
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+ K++ W+A++ HGHG ++ F EMV+ G KPN VTF + L+AC H GLVDE
Sbjct: 368 --RSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDE 425
Query: 180 GLSLFQFM--LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
G F M ++++ P ++HY C+IDLL RAG LD+A L++ MP+KP+ + GA+L A
Sbjct: 426 GRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSA 485
Query: 238 CVSHENV-ELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKL 296
C + + EL + ++E E++G Y+LL+N++AA RW DV ++R ++ G+ K+
Sbjct: 486 CKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKV 545
Query: 297 PAQSLVE 303
P S +E
Sbjct: 546 PGSSYIE 552
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 117/242 (48%), Gaps = 7/242 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
Y C + K+F + + W +++GF L +EA+ F +M DV+P+ AT
Sbjct: 150 FYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLAT 206
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ +L + + L IH +++ L LE + L+D+Y KC L A +F
Sbjct: 207 YVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFG--E 264
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEM-VQSGVKPNQVTFTSVLHACSHVGLVDE 179
L+ KD + W+++I+ + A+ LF+ M SG+KP+ TSVL AC+ +G VD
Sbjct: 265 LEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDH 324
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
G + +++L I T I+D+ + G ++ A + + K N W ALLG
Sbjct: 325 GRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSK-NVFTWNALLGGLA 383
Query: 240 SH 241
H
Sbjct: 384 IH 385
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 98/218 (44%), Gaps = 6/218 (2%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N +LS + R I +K + PD TF + A + +++ IH +
Sbjct: 74 YNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVT 133
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+ GF + V + LV Y CG A +F +P+ +D++ W+ II + + G + A
Sbjct: 134 KMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPV--RDVVSWTGIITGFTRTGLYKEA 191
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDL 205
+ F++M V+PN T+ VL + VG + G + +LK + ++ +ID+
Sbjct: 192 LDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDM 248
Query: 206 LGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHEN 243
+ +L DA + + K + W +++ V E
Sbjct: 249 YVKCEQLSDAMRVFGELE-KKDKVSWNSMISGLVHCER 285
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 221 bits (563), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 175/298 (58%), Gaps = 4/298 (1%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLV-EDVQPDNATFNSLLPA 67
+ +++ F +K WN ++SG + SL EAI++F M E V D T S+ A
Sbjct: 420 DAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASA 479
Query: 68 YAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDII 127
L L A I+ Y+ ++G + + + LVD++S+CG A IFN L ++D+
Sbjct: 480 CGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFN--SLTNRDVS 537
Query: 128 IWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM 187
W+A I A G+ E A+ LF++M++ G+KP+ V F L ACSH GLV +G +F M
Sbjct: 538 AWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSM 597
Query: 188 LK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 246
LK H + P HY C++DLLGRAG L++A LI MP++PN +W +LL AC NVE+
Sbjct: 598 LKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEM 657
Query: 247 GEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
AA L PE TG+Y+LL+N+YA+ GRW D+ KVR + E GLRK P S +++
Sbjct: 658 AAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQI 715
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 134/261 (51%), Gaps = 10/261 (3%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLV-EDVQPDNAT 60
YA+C + + K+F + S++ W +++ G+ A++A+ LF +M+ E+V P++ T
Sbjct: 179 YAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVT 238
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
++ A A L DL+ ++ ++ SG + S LVD+Y KC ++ A +F+
Sbjct: 239 MVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYG 298
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ D+ +A+ + Y + G A+ +FN M+ SGV+P++++ S + +CS + + G
Sbjct: 299 ASNLDLC--NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWG 356
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
S ++L++ + +ID+ + R D A+ + M K W +++
Sbjct: 357 KSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK-TVVTWNSIVAG--- 412
Query: 241 HENVELGEVAARW-TFELEPE 260
VE GEV A W TFE PE
Sbjct: 413 --YVENGEVDAAWETFETMPE 431
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 119/254 (46%), Gaps = 34/254 (13%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KCN +++ ++F + NA+ S ++ L REA+ +F M+ V+PD +
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S + + + L ++ + H Y++R+GF + + L+D+Y KC A IF+
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD--R 397
Query: 121 LKDKDIIIWSAIIAAYGKHGH------------------------GEMAVSLFNEMV--- 153
+ +K ++ W++I+A Y ++G G + SLF E +
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457
Query: 154 -----QSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGR 208
Q GV + VT S+ AC H+G +D ++ ++ K+ I V T ++D+ R
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSR 517
Query: 209 AGRLDDAYNLIRTM 222
G + A ++ ++
Sbjct: 518 CGDPESAMSIFNSL 531
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 11/199 (5%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N+++ G+ + L EAI LF +M+ + PD TF L A A + IH ++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+ G+ L V + LV Y++CG L A +F+ + +++++ W+++I Y + + A
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFD--EMSERNVVSWTSMICGYARRDFAKDA 219
Query: 146 VSLFNEMVQS-GVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI-------IPLVD 197
V LF MV+ V PN VT V+ AC+ + ++ G ++ F+ I LVD
Sbjct: 220 VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVD 279
Query: 198 HYTCIIDLLGRAGRLDDAY 216
Y + + A RL D Y
Sbjct: 280 MYM-KCNAIDVAKRLFDEY 297
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
M+++C + +F + + + W A + A AI+LF M+ + ++PD
Sbjct: 514 MFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVA 573
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEV-ASILVDIYSKCGSLGYAHHIFNII 119
F L A + ++Q I +++ + +V +VD+ + G L A + +
Sbjct: 574 FVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDM 633
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMA 145
P++ D +IW++++AA G+ EMA
Sbjct: 634 PMEPND-VIWNSLLAACRVQGNVEMA 658
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 221 bits (563), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 177/304 (58%), Gaps = 3/304 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC C + + +F + +K W A++ G+ A EA+++F M + PD+ T
Sbjct: 314 MYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYT 373
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ A A ++ L++ H I SG ++ + V++ LV +Y KCG + + +FN +
Sbjct: 374 LGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN 433
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++D + W+A+++AY + G + LF++MVQ G+KP+ VT T V+ ACS GLV++G
Sbjct: 434 VRDA--VSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG 491
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F+ M + I+P + HY+C+IDL R+GRL++A I MP P+ W LL AC
Sbjct: 492 QRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACR 551
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
+ N+E+G+ AA EL+P + Y LL+++YA+ G+W V ++R + E ++K P Q
Sbjct: 552 NKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQ 611
Query: 300 SLVE 303
S ++
Sbjct: 612 SWIK 615
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 120/218 (55%), Gaps = 3/218 (1%)
Query: 20 KKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMN 79
+K + W A++ G N LA+EAI+ F++M V+ ++ D F S+LPA L + +
Sbjct: 232 EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQ 291
Query: 80 IHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKH 139
IH +IR+ F + V S L+D+Y KC L YA +F+ +K K+++ W+A++ YG+
Sbjct: 292 IHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFD--RMKQKNVVSWTAMVVGYGQT 349
Query: 140 GHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHY 199
G E AV +F +M +SG+ P+ T + AC++V ++EG + +I V
Sbjct: 350 GRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVS 409
Query: 200 TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
++ L G+ G +DD+ L M ++ + W A++ A
Sbjct: 410 NSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSA 446
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 137/346 (39%), Gaps = 71/346 (20%)
Query: 15 FMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNATFNSLLPAYAILAD 73
F K + WN ++ G+ + L A++ + M+ + T ++L +
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGH 154
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF----------------- 116
+ IH +I+ GF L V S L+ +Y+ G + A +F
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214
Query: 117 -----------NIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFT 165
+ +KD + W+A+I ++G + A+ F EM G+K +Q F
Sbjct: 215 LLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFG 274
Query: 166 SVLHACSHVGLVDEGLSLFQFMLK----HHII---PLVDHY------------------- 199
SVL AC +G ++EG + +++ HI L+D Y
Sbjct: 275 SVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK 334
Query: 200 -----TCIIDLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELGEVAA 251
T ++ G+ GR ++A + M I P+H G + AC + ++E G
Sbjct: 335 NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGS--- 391
Query: 252 RWTFELEPENTG--NYILLAN-LYAAVGRWRDVEKVRDMVNEVGLR 294
F + +G +Y+ ++N L G+ D++ + NE+ +R
Sbjct: 392 --QFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR 435
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 221 bits (563), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 114/305 (37%), Positives = 178/305 (58%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC ++ +F T++ +L G N EAIQ F +ML V+ D
Sbjct: 300 MYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANV 359
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+++L I L +H +I+ F V + L+++YSKCG L + +F +P
Sbjct: 360 VSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP 419
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++ + W+++IAA+ +HGHG A+ L+ EM VKP VTF S+LHACSHVGL+D+G
Sbjct: 420 --KRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKG 477
Query: 181 LSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
L M + H I P +HYTCIID+LGRAG L +A + I ++P+KP+ +W ALLGAC
Sbjct: 478 RELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACS 537
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H + E+GE AA F+ P+++ +IL+AN+Y++ G+W++ K + +G+ K
Sbjct: 538 FHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGI 597
Query: 300 SLVEV 304
S +E+
Sbjct: 598 SSIEI 602
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 137/296 (46%), Gaps = 17/296 (5%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y KC C +F S + AV+SG I N L + ++LF M V P++ T+
Sbjct: 200 YFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTY 259
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
S L A + + + IH L + G L + S L+D+YSKCGS+ A IF
Sbjct: 260 LSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFE--ST 317
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
+ D + + I+ ++G E A+ F M+Q+GV+ + ++VL V +D L
Sbjct: 318 TEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVL----GVSFIDNSL 373
Query: 182 SLFQ----FMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
L + ++K +I++ + G L D+ + R MP K N+ W +++ A
Sbjct: 374 GLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMIAA 432
Query: 238 CVSHEN--VELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEV 291
H + L T E++P + ++ L + + VG ++K R+++NE+
Sbjct: 433 FARHGHGLAALKLYEEMTTLEVKPTDV-TFLSLLHACSHVGL---IDKGRELLNEM 484
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 13/226 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YAKC + K+F + + N V GF+ N L K+ML D+AT
Sbjct: 99 LYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG-GFDHAT 157
Query: 61 FNSLL-----PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 115
+L P + ++ + IH I SG+ + V + L+ Y KCG +
Sbjct: 158 LTIVLSVCDTPEFCLVTKM-----IHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGV 212
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVG 175
F+ + +++I +A+I+ ++ E + LF+ M + V PN VT+ S L ACS
Sbjct: 213 FD--GMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQ 270
Query: 176 LVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRT 221
+ EG + + K+ I + + ++D+ + G ++DA+ + +
Sbjct: 271 RIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFES 316
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 221 bits (562), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 182/304 (59%), Gaps = 3/304 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y KC + +MF + + W+ +++G+ N+ +AI LF+ M E V +
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
S++ + A L L+ + Y+++S L + + LVD++ +CG + A H+F +P
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLP- 311
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
+ D + WS+II HGH A+ F++M+ G P VTFT+VL ACSH GLV++GL
Sbjct: 312 -ETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGL 370
Query: 182 SLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+++ M K H I P ++HY CI+D+LGRAG+L +A N I M +KPN + GALLGAC
Sbjct: 371 EIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKI 430
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
++N E+ E +++PE++G Y+LL+N+YA G+W +E +RDM+ E ++K P S
Sbjct: 431 YKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWS 490
Query: 301 LVEV 304
L+E+
Sbjct: 491 LIEI 494
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 115/260 (44%), Gaps = 30/260 (11%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
+Y +F + +N ++ F + +A + QML + PDN TF L+ A +
Sbjct: 70 AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSE 129
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD------- 123
+ + H ++R GF + V + LV +Y+ CG + A IF + +D
Sbjct: 130 MECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 124 ----------------------KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQ 161
+++ WS +I Y K+ E A+ LF M + GV N+
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE 249
Query: 162 VTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRT 221
SV+ +C+H+G ++ G +++++K H+ + T ++D+ R G ++ A ++
Sbjct: 250 TVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEG 309
Query: 222 MPIKPNHAVWGALLGACVSH 241
+P + + W +++ H
Sbjct: 310 LP-ETDSLSWSSIIKGLAVH 328
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 221 bits (562), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 113/280 (40%), Positives = 171/280 (61%), Gaps = 5/280 (1%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
WN+++ GF NS + A++LFK+M + AT S+L A LA L+ M H +++
Sbjct: 228 WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV 287
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+ + L + + LVD+Y KCGSL A +FN +K++D+I WS +I+ ++G+ + A
Sbjct: 288 K--YDQDLILNNALVDMYCKCGSLEDALRVFN--QMKERDVITWSTMISGLAQNGYSQEA 343
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK-HHIIPLVDHYTCIID 204
+ LF M SG KPN +T VL ACSH GL+++G F+ M K + I P+ +HY C+ID
Sbjct: 344 LKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMID 403
Query: 205 LLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGN 264
LLG+AG+LDDA L+ M +P+ W LLGAC N+ L E AA+ L+PE+ G
Sbjct: 404 LLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGT 463
Query: 265 YILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
Y LL+N+YA +W VE++R + + G++K P S +EV
Sbjct: 464 YTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEV 503
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 124/222 (55%), Gaps = 7/222 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY K N N ++++F + ++ W ++S + + ++A++L ML ++V+P+ T
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
++S+L + ++D++ +HC +I+ G + V S L+D+++K G A +F+
Sbjct: 165 YSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFD--E 219
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ D I+W++II + ++ ++A+ LF M ++G Q T TSVL AC+ + L++ G
Sbjct: 220 MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 279
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM 222
+ ++K+ ++++ ++D+ + G L+DA + M
Sbjct: 280 MQAHVHIVKYDQDLILNN--ALVDMYCKCGSLEDALRVFNQM 319
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 220 bits (561), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 181/305 (59%), Gaps = 4/305 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAK ++ ++F + K W +++SGF N LA +A + +M QPD T
Sbjct: 261 MYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVT 320
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L A + + LK +HCY+++ L R+ A+ L+D+YSKCG+L + IF +
Sbjct: 321 LVGVLVACSQVGSLKTGRLVHCYILKRHVLDRV-TATALMDMYSKCGALSSSREIFEHVG 379
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
KD++ W+ +I+ YG HG+G+ VSLF +M +S ++P+ TF S+L A SH GLV++G
Sbjct: 380 --RKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQG 437
Query: 181 LSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F M+ K+ I P HY C+IDLL RAGR+++A ++I + + +W ALL C+
Sbjct: 438 QHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCI 497
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
+H N+ +G++AA +L P++ G L++N +A +W++V KVR ++ + K+P
Sbjct: 498 NHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGY 557
Query: 300 SLVEV 304
S +EV
Sbjct: 558 SAIEV 562
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 148/329 (44%), Gaps = 50/329 (15%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y KC + + +F K +K+ W +++GF + +A++ +++M E D
Sbjct: 160 LYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVV 219
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
LL A L D K ++H YL R+G + V + LVD+Y+K G + A +F+ +
Sbjct: 220 MLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMM 279
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
K + W ++I+ + ++G A EM G +P+ VT VL ACS VG + G
Sbjct: 280 FKTA--VSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTG 337
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIR-----------TM------- 222
+ ++LK H++ V T ++D+ + G L + + TM
Sbjct: 338 RLVHCYILKRHVLDRVT-ATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIH 396
Query: 223 ----------------PIKPNHAVWGALLGACVSHENVELGEVAARW------TFELEPE 260
I+P+HA + +LL A +SH L E W ++++P
Sbjct: 397 GNGQEVVSLFLKMTESNIEPDHATFASLLSA-LSHSG--LVEQGQHWFSVMINKYKIQPS 453
Query: 261 NTGNYILLANLYAAVGRWRDVEKVRDMVN 289
+Y+ L +L A GR VE+ DM+N
Sbjct: 454 EK-HYVCLIDLLARAGR---VEEALDMIN 478
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 111/232 (47%), Gaps = 5/232 (2%)
Query: 8 GNLSY--KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLL 65
G +SY K+F + ++ + +N+++ + E ++L+ QM+ E +QPD++TF +
Sbjct: 64 GEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTI 123
Query: 66 PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKD 125
A L++ + C + G+ + V S ++++Y KCG + A +F + +D
Sbjct: 124 KACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFG--KMAKRD 181
Query: 126 IIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQ 185
+I W+ ++ + + G AV + EM G ++V +L A +G G S+
Sbjct: 182 VICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHG 241
Query: 186 FMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
++ + + V T ++D+ + G ++ A + M K WG+L+
Sbjct: 242 YLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFK-TAVSWGSLISG 292
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/305 (34%), Positives = 186/305 (60%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y + + + K+F S++ WN+++S E LF++M E + AT
Sbjct: 280 LYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWAT 339
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
++LPA + +A L IH +++S + + + L+D+Y KCG + Y+ +F++
Sbjct: 340 LTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDV-- 397
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ KD+ W+ ++ Y +G+ E ++LF M++SGV P+ +TF ++L CS GL + G
Sbjct: 398 MLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYG 457
Query: 181 LSLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
LSLF+ M + + P ++HY C++D+LGRAG++ +A +I TMP KP+ ++WG+LL +C
Sbjct: 458 LSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCR 517
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H NV +GE+AA+ F LEP N GNY++++N+YA W +V+K+R+M+ + G++K
Sbjct: 518 LHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGC 577
Query: 300 SLVEV 304
S V+V
Sbjct: 578 SWVQV 582
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 116/248 (46%), Gaps = 6/248 (2%)
Query: 1 MYAKCNCGNLSYKMF---MKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPD 57
+++ C +L+ K+F +S W A+ G+ N R+A+ ++ ML ++P
Sbjct: 176 LFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPG 235
Query: 58 NATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
N + + L A L DL+ IH +++ V ++L+ +Y + G A +F+
Sbjct: 236 NFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFD 295
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLV 177
+ +++++ W+++I+ K +LF +M + + + T T++L ACS V +
Sbjct: 296 --GMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAAL 353
Query: 178 DEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
G + +LK P V ++D+ G+ G ++ + + M K + A W +L
Sbjct: 354 LTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTK-DLASWNIMLNC 412
Query: 238 CVSHENVE 245
+ N+E
Sbjct: 413 YAINGNIE 420
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/295 (38%), Positives = 181/295 (61%), Gaps = 4/295 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNATFNSLLPAYAIL 71
++F +K W V+SGF N EA+++F M + V+P++ T S+LPA A L
Sbjct: 169 ELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANL 228
Query: 72 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
+L+ + Y +GF + V + +++YSKCG + A +F + +++ W++
Sbjct: 229 GELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELG-NQRNLCSWNS 287
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK-H 190
+I + HG + A++LF +M++ G KP+ VTF +L AC H G+V +G LF+ M + H
Sbjct: 288 MIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVH 347
Query: 191 HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVA 250
I P ++HY C+IDLLGR G+L +AY+LI+TMP+KP+ VWG LLGAC H NVE+ E+A
Sbjct: 348 KISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIA 407
Query: 251 ARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS-LVEV 304
+ F+LEP N GN ++++N+YAA +W V ++R ++ + + K S VEV
Sbjct: 408 SEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEV 462
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 117/267 (43%), Gaps = 36/267 (13%)
Query: 9 NLSY--KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLP 66
NL Y K+F T +N ++ + + E+I L+ + + ++P + TFN +
Sbjct: 31 NLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFA 90
Query: 67 AYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDI 126
A A + + +H RSGF + L+ Y+K G+L A +F+ + +D+
Sbjct: 91 ASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFD--EMSKRDV 148
Query: 127 IIWSAIIAAYGKHGHGEMAVSLFNEM----------VQSG-------------------- 156
+W+A+I Y + G + A+ LF+ M V SG
Sbjct: 149 PVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKD 208
Query: 157 --VKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDD 214
VKPN +T SVL AC+++G ++ G L + ++ + I++ + G +D
Sbjct: 209 KSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDV 268
Query: 215 AYNLIRTMPIKPNHAVWGALLGACVSH 241
A L + + N W +++G+ +H
Sbjct: 269 AKRLFEELGNQRNLCSWNSMIGSLATH 295
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 172/305 (56%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
M+ K + + + F S+K +N L G N +A +L ++ ++ T
Sbjct: 417 MFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFT 476
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F SLL A + +++ IH +++ G V + L+ +YSKCGS+ A +FN
Sbjct: 477 FASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNF-- 534
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++++++I W+++I + KHG + FN+M++ GVKPN+VT+ ++L ACSHVGLV EG
Sbjct: 535 MENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEG 594
Query: 181 LSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F M + H I P ++HY C++DLL RAG L DA+ I TMP + + VW LGAC
Sbjct: 595 WRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACR 654
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H N ELG++AAR EL+P YI L+N+YA G+W + ++R + E L K
Sbjct: 655 VHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGC 714
Query: 300 SLVEV 304
S +EV
Sbjct: 715 SWIEV 719
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 139/293 (47%), Gaps = 19/293 (6%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
+YK+F K S+ W +++ + REAI+ F M++ + D T +S+ A A
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKC---GSLGYAHHIFNIIPLKDKDII 127
L +L +H + IRSG + +E + LVD+Y+KC GS+ +F+ ++D ++
Sbjct: 282 LENLSLGKQLHSWAIRSGLVDDVECS--LVDMYAKCSADGSVDDCRKVFD--RMEDHSVM 337
Query: 128 IWSAIIAAYGKHGH-GEMAVSLFNEMVQSG-VKPNQVTFTSVLHACSHVGLVDEGLSLFQ 185
W+A+I Y K+ + A++LF+EM+ G V+PN TF+S AC ++ G +
Sbjct: 338 SWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLG 397
Query: 186 FMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 245
K + +I + ++ R++DA ++ K N + L + N E
Sbjct: 398 QAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK-NLVSYNTFLDGTCRNLNFE 456
Query: 246 -----LGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGL 293
L E+ R EL LL+ + A VG R E++ V ++GL
Sbjct: 457 QAFKLLSEITER---ELGVSAFTFASLLSGV-ANVGSIRKGEQIHSQVVKLGL 505
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 13/208 (6%)
Query: 40 REAIQLFKQMLVEDVQP-DNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASI 98
R A+ M + ++P D+ TF+SLL + D + +H LI + +E S+
Sbjct: 43 RGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIE----FDIEPDSV 98
Query: 99 L----VDIYSKCGSLGYAHHIFNIIP-LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMV 153
L + +YSK G A +F + +D++ WSA++A YG +G A+ +F E +
Sbjct: 99 LYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFL 158
Query: 154 QSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH-HIIPLVDHYTCIIDLLGRA-GR 211
+ G+ PN +T+V+ ACS+ V G F++K H V +ID+ +
Sbjct: 159 ELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENS 218
Query: 212 LDDAYNLIRTMPIKPNHAVWGALLGACV 239
++AY + M + N W ++ C+
Sbjct: 219 FENAYKVFDKMS-ELNVVTWTLMITRCM 245
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 109/301 (36%), Positives = 176/301 (58%), Gaps = 7/301 (2%)
Query: 5 CNCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFN 62
C G + K+F + +++ WNA++ G H A EA+++F M ++PD+ T
Sbjct: 163 CKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMV 222
Query: 63 SLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASI--LVDIYSKCGSLGYAHHIFNIIP 120
S+ + L DL A +H ++++ + ++ + L+D+Y KCG + A HIF
Sbjct: 223 SVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFE--E 280
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++ ++++ WS++I Y +G+ A+ F +M + GV+PN++TF VL AC H GLV+EG
Sbjct: 281 MRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEG 340
Query: 181 LSLFQFMLKH-HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+ F M + P + HY CI+DLL R G+L +A ++ MP+KPN VWG L+G C
Sbjct: 341 KTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCE 400
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
+VE+ E A + ELEP N G Y++LAN+YA G W+DVE+VR ++ + K+PA
Sbjct: 401 KFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAY 460
Query: 300 S 300
S
Sbjct: 461 S 461
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 125/298 (41%), Gaps = 42/298 (14%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
WN ++ +I + +AIQ++ M+ V PD + ++ A + D +H +
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
R GF+ S + +Y K G A +F+ P ++ + W+AII G A
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENP--ERKLGSWNAIIGGLNHAGRANEA 202
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVD--HYTCII 203
V +F +M +SG++P+ T SV +C +G + L + +L+ D +I
Sbjct: 203 VEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLI 262
Query: 204 DLLGRAGRLD----------------------------------DAYNLIRTMPIKPNHA 229
D+ G+ GR+D + + +R ++PN
Sbjct: 263 DMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKI 322
Query: 230 VWGALLGACVSHENVELGEV---AARWTFELEPENTGNYILLANLYAAVGRWRDVEKV 284
+ +L ACV VE G+ + FELEP +Y + +L + G+ ++ +KV
Sbjct: 323 TFVGVLSACVHGGLVEEGKTYFAMMKSEFELEP-GLSHYGCIVDLLSRDGQLKEAKKV 379
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 219 bits (557), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/303 (37%), Positives = 178/303 (58%), Gaps = 7/303 (2%)
Query: 5 CNCGNLSYKM--FMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFN 62
C+ G++ + F + S++ WN+++S REA++LF +M+ + PD AT
Sbjct: 179 CDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVV 238
Query: 63 SLLPAYAILADLKQAMNIHCYLIRSG-FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
++LP A L L IH SG F + V + LVD Y K G L A IF +
Sbjct: 239 TVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFR--KM 296
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG-VKPNQVTFTSVLHACSHVGLVDEG 180
+ ++++ W+ +I+ +G GE + LF+ M++ G V PN+ TF VL CS+ G V+ G
Sbjct: 297 QRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERG 356
Query: 181 LSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
LF M+ + + +HY ++DL+ R+GR+ +A+ ++ MP+ N A+WG+LL AC
Sbjct: 357 EELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACR 416
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
SH +V+L EVAA ++EP N+GNY+LL+NLYA GRW+DVEKVR ++ + LRK Q
Sbjct: 417 SHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQ 476
Query: 300 SLV 302
S +
Sbjct: 477 STI 479
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 118/277 (42%), Gaps = 38/277 (13%)
Query: 7 CGNLSY-----KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
CG+LS ++F +NA++ + E++ F M + D T+
Sbjct: 46 CGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTY 105
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASI-LVDIYSKCGSLGYAHHIF---- 116
LL + + L+DL+ +H LIR+GF +RL I +V++Y+ G +G A +F
Sbjct: 106 APLLKSCSSLSDLRFGKCVHGELIRTGF-HRLGKIRIGVVELYTSGGRMGDAQKVFDEMS 164
Query: 117 --NII-----------------------PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNE 151
N++ + ++ I+ W+++I++ K G A+ LF E
Sbjct: 165 ERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCE 224
Query: 152 MVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIP-LVDHYTCIIDLLGRAG 210
M+ G P++ T +VL + +G++D G + + + ++D ++G
Sbjct: 225 MIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSG 284
Query: 211 RLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 247
L+ A + R M + N W L+ + E G
Sbjct: 285 DLEAATAIFRKMQ-RRNVVSWNTLISGSAVNGKGEFG 320
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 218 bits (556), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 178/296 (60%), Gaps = 7/296 (2%)
Query: 10 LSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQML-VEDVQPDNATFNSLLPAY 68
L+ K+ S + WN ++ G++ N EA++ K ML D++P+ +F S L A
Sbjct: 116 LAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAAC 175
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIII 128
A L DL A +H +I SG ++S LVD+Y+KCG +G + +F +K D+ I
Sbjct: 176 ARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF--YSVKRNDVSI 233
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML 188
W+A+I + HG A+ +F+EM V P+ +TF +L CSH GL++EG F M
Sbjct: 234 WNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMS 293
Query: 189 KH-HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 247
+ I P ++HY ++DLLGRAGR+ +AY LI +MPI+P+ +W +LL + +++N ELG
Sbjct: 294 RRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELG 353
Query: 248 EVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVE 303
E+A + L +G+Y+LL+N+Y++ +W +KVR+++++ G+RK +S +E
Sbjct: 354 EIAIQ---NLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLE 406
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 27/161 (16%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YAKC S ++F + + WNA+++GF + LA EAI++F +M E V PD+ T
Sbjct: 209 VYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSIT 268
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLY------------RLEVASILVDIYSKCGS 108
F LL + HC L+ G Y +LE +VD+ + G
Sbjct: 269 FLGLLTTCS-----------HCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGR 317
Query: 109 LGYAHHIFNIIPLKDKDIIIWSAIIAA---YGKHGHGEMAV 146
+ A+ + +P+ + D++IW +++++ Y GE+A+
Sbjct: 318 VKEAYELIESMPI-EPDVVIWRSLLSSSRTYKNPELGEIAI 357
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 218 bits (555), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 112/305 (36%), Positives = 178/305 (58%), Gaps = 5/305 (1%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YAK +++ F + K +N++++G + N E+ +LF +M ++PD T
Sbjct: 353 YAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTL 412
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+L A + LA L + H Y + G+ + + L+D+Y+KCG L A +F+ +
Sbjct: 413 LGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFD--TM 470
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
+DI+ W+ ++ +G HG G+ A+SLFN M ++GV P++VT ++L ACSH GLVDEG
Sbjct: 471 HKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGK 530
Query: 182 SLFQFMLK--HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
LF M + ++IP +DHY C+ DLL RAG LD+AY+ + MP +P+ V G LL AC
Sbjct: 531 QLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACW 590
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
+++N ELG ++ L E T + +LL+N Y+A RW D ++R + + GL K P
Sbjct: 591 TYKNAELGNEVSKKMQSL-GETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGY 649
Query: 300 SLVEV 304
S V+V
Sbjct: 650 SWVDV 654
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 120/239 (50%), Gaps = 9/239 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED----VQP 56
+YAK C + ++F KK W+A++ G++ N + +EA ++F QMLV D V P
Sbjct: 249 VYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTP 308
Query: 57 DNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 116
+L A DL +HCY +++GF+ L V + ++ Y+K GSL A F
Sbjct: 309 --VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQF 366
Query: 117 NIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGL 176
+ I L KD+I ++++I + E + LF+EM SG++P+ T VL ACSH+
Sbjct: 367 SEIGL--KDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAA 424
Query: 177 VDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ G S + + H ++D+ + G+LD A + TM K + W +L
Sbjct: 425 LGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMH-KRDIVSWNTML 482
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 122/253 (48%), Gaps = 7/253 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAP--WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
+YA CN L+ +F + R P W+ ++ + N A +A+ L+ +ML V+P
Sbjct: 44 LYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTK 103
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
T+ +L A A L + IH ++ S F + V + LVD Y+KCG L A +F+
Sbjct: 104 YTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDE 163
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSVLHACSHVGLV 177
+P +D++ W+A+I+ + H + LF +M + G+ PN T + A G +
Sbjct: 164 MP--KRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGAL 221
Query: 178 DEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
EG ++ + + + T I+D+ ++ + A + + K N W A++G
Sbjct: 222 REGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVF-DLDFKKNEVTWSAMIGG 280
Query: 238 CVSHENV-ELGEV 249
V +E + E GEV
Sbjct: 281 YVENEMIKEAGEV 293
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 89/185 (48%), Gaps = 16/185 (8%)
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDI---YSKCGSLGYAHHIFN 117
F SLL +L IH +L++ L +++LV++ Y+ C + A H+F+
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSL--TLSSSTVLVNLTRLYASCNEVELARHVFD 59
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLV 177
IP + I W +I AY + E A+ L+ +M+ SGV+P + T+ VL AC+ + +
Sbjct: 60 EIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAI 119
Query: 178 DEGLSLFQFMLKHHIIP---LVDHYTC--IIDLLGRAGRLDDAYNLIRTMPIKPNHAVWG 232
D+G ++ H+ D Y C ++D + G L+ A + MP K + W
Sbjct: 120 DDGK-----LIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMP-KRDMVAWN 173
Query: 233 ALLGA 237
A++
Sbjct: 174 AMISG 178
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 77/168 (45%), Gaps = 3/168 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC +++ ++F K+ WN +L GF + L +EA+ LF M V PD T
Sbjct: 453 MYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVT 512
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGF--LYRLEVASILVDIYSKCGSLGYAHHIFNI 118
++L A + + + + + R F + R++ + + D+ ++ G L A+ N
Sbjct: 513 LLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNK 572
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTS 166
+P + DI + +++A + + E+ + +M G + S
Sbjct: 573 MPF-EPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTESLVLLS 619
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 218 bits (555), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 177/304 (58%), Gaps = 2/304 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y K N + +F+ + W A++ G+ + EAI LF+ M+ +P++ T
Sbjct: 357 YIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTL 416
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
++L + LA L IH ++SG +Y + V++ L+ +Y+K G++ A F++I
Sbjct: 417 AAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRC 476
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
++D + W+++I A +HGH E A+ LF M+ G++P+ +T+ V AC+H GLV++G
Sbjct: 477 -ERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGR 535
Query: 182 SLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
F M IIP + HY C++DL GRAG L +A I MPI+P+ WG+LL AC
Sbjct: 536 QYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRV 595
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H+N++LG+VAA LEPEN+G Y LANLY+A G+W + K+R + + ++K S
Sbjct: 596 HKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFS 655
Query: 301 LVEV 304
+EV
Sbjct: 656 WIEV 659
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 116/269 (43%), Gaps = 32/269 (11%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDV-QPDNATFNSLLPA 67
+L+ F + +++ WN+++SGF A+ +F +ML + + PD T S+L A
Sbjct: 229 DLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSA 288
Query: 68 YAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN---------- 117
A L L IH +++ +GF V + L+ +YS+CG + A +
Sbjct: 289 CANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIE 348
Query: 118 ---------------------IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG 156
+ LKD+D++ W+A+I Y +HG A++LF MV G
Sbjct: 349 GFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGG 408
Query: 157 VKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAY 216
+PN T ++L S + + G + +K I V +I + +AG + A
Sbjct: 409 QRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSAS 468
Query: 217 NLIRTMPIKPNHAVWGALLGACVSHENVE 245
+ + + W +++ A H + E
Sbjct: 469 RAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 120/258 (46%), Gaps = 38/258 (14%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y+K + + + F + ++ + W ++ G+ + +AI++ M+ E ++P T
Sbjct: 90 YSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTL 149
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
++L + A ++ +H ++++ G + V++ L+++Y+KCG A +F+ + +
Sbjct: 150 TNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVV 209
Query: 122 KD-----------------------------KDIIIWSAIIAAYGKHGHGEMAVSLFNEM 152
+D +DI+ W+++I+ + + G+ A+ +F++M
Sbjct: 210 RDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKM 269
Query: 153 VQ-SGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVD----HYTCIIDLLG 207
++ S + P++ T SVL AC+++ E L + + + H + D +I +
Sbjct: 270 LRDSLLSPDRFTLASVLSACANL----EKLCIGKQIHSHIVTTGFDISGIVLNALISMYS 325
Query: 208 RAGRLDDAYNLIRTMPIK 225
R G ++ A LI K
Sbjct: 326 RCGGVETARRLIEQRGTK 343
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 77/176 (43%), Gaps = 43/176 (24%)
Query: 43 IQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDI 102
++L +L + V N F + L +HC +I+SG ++ + + + L+++
Sbjct: 13 LELCTNLLQKSVNKSNGRFTAQL--------------VHCRVIKSGLMFSVYLMNNLMNV 58
Query: 103 YSKCGSLGYAHHIFNIIPLK-----------------------------DKDIIIWSAII 133
YSK G +A +F+ +PL+ +D + W+ +I
Sbjct: 59 YSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMI 118
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK 189
Y G A+ + +MV+ G++P Q T T+VL + + ++ G + F++K
Sbjct: 119 VGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVK 174
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 218 bits (554), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 111/309 (35%), Positives = 179/309 (57%), Gaps = 7/309 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE---DVQPD 57
+Y+ C + K+F + K+ T WN + S ++ N R+ + LF +M + V+PD
Sbjct: 157 LYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPD 216
Query: 58 NATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
T L A A L L +H ++ +G L +++ LV +YS+CGS+ A+ +F
Sbjct: 217 GVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVF- 275
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLV 177
+++++++ W+A+I+ +G G+ A+ FNEM++ G+ P + T T +L ACSH GLV
Sbjct: 276 -YGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLV 334
Query: 178 DEGLSLFQFML--KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
EG+ F M + I P + HY C++DLLGRA LD AY+LI++M +KP+ +W LL
Sbjct: 335 AEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLL 394
Query: 236 GACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRK 295
GAC H +VELGE EL+ E G+Y+LL N Y+ VG+W V ++R ++ E +
Sbjct: 395 GACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHT 454
Query: 296 LPAQSLVEV 304
P S +E+
Sbjct: 455 KPGCSAIEL 463
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 7/233 (3%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
N S ++F + + N ++ F + E +LF+ + P N +S
Sbjct: 63 NYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKC 122
Query: 69 AILA-DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDII 127
I + DL + IH + GFL + + L+D+YS C + A +F+ IP +D +
Sbjct: 123 CIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIP--KRDTV 180
Query: 128 IWSAIIAAYGKHGHGEMAVSLFNEM---VQSGVKPNQVTFTSVLHACSHVGLVDEGLSLF 184
W+ + + Y ++ + LF++M V VKP+ VT L AC+++G +D G +
Sbjct: 181 SWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVH 240
Query: 185 QFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
F+ ++ + ++ ++ + R G +D AY + M + N W AL+
Sbjct: 241 DFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMR-ERNVVSWTALISG 292
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 217 bits (553), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 180/305 (59%), Gaps = 4/305 (1%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNAT 60
YAK + + +F + + +N++++G++ N EA+++F M E + PD+ T
Sbjct: 293 YAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTT 352
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+LPA A L L +A+++H Y++ F ++ L+D+YSKCGS+ +A +F I
Sbjct: 353 LVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGI- 411
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++K I W+A+I HG GE A + ++ + +KP+ +TF VL+ACSH GLV EG
Sbjct: 412 -ENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEG 470
Query: 181 LSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
L F+ M KH I P + HY C++D+L R+G ++ A NLI MP++PN +W L AC
Sbjct: 471 LLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACS 530
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H+ E GE+ A+ N +Y+LL+N+YA+ G W+DV +VR M+ E + K+P
Sbjct: 531 HHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGC 590
Query: 300 SLVEV 304
S +E+
Sbjct: 591 SWIEL 595
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 105/219 (47%), Gaps = 12/219 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y KC C LS +MF + K+ + +N+++ G++ L A +LF M +E + +
Sbjct: 165 LYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPME--MKNLIS 222
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+NS++ YA +D ++I L L + ++D Y K G + A +F+++P
Sbjct: 223 WNSMISGYAQTSD---GVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMP 279
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+D++ W+ +I Y K G A +LF++M V V + S++ E
Sbjct: 280 --RRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDV----VAYNSMMAGYVQNKYHMEA 333
Query: 181 LSLFQFMLKH-HIIPLVDHYTCIIDLLGRAGRLDDAYNL 218
L +F M K H++P ++ + + GRL A ++
Sbjct: 334 LEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDM 372
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 10/211 (4%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
WNAV+ H R+A+ L ML V D + + +L A + L +K M IH +L
Sbjct: 89 WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLK 148
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
++G L + + L+ +Y KCG LG + +F+ +P +D + ++++I Y K G A
Sbjct: 149 KTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDS--VSYNSMIDGYVKCGLIVSA 206
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGL-VDEGLSLFQFMLKHHIIPLVDHYTCIID 204
LF+ M N +++ S++ + VD LF M + +I + +ID
Sbjct: 207 RELFDLMPME--MKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLIS----WNSMID 260
Query: 205 LLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ GR++DA L MP + + W ++
Sbjct: 261 GYVKHGRIEDAKGLFDVMP-RRDVVTWATMI 290
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 3/172 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC + +F K WNA++ G + L A + Q+ ++PD+ T
Sbjct: 394 MYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDIT 453
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLY-RLEVASILVDIYSKCGSLGYAHHIFNII 119
F +L A + +K+ + + R + RL+ +VDI S+ GS+ A ++ +
Sbjct: 454 FVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEM 513
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMV-QSGVKPNQVTFTSVLHA 170
P++ D +IW + A H E + ++ Q+G P+ S ++A
Sbjct: 514 PVEPND-VIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYA 564
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 217 bits (553), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 112/307 (36%), Positives = 185/307 (60%), Gaps = 5/307 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y+KC + +F + K WN ++ G+ H +L +EA+ LF++ML P++ T
Sbjct: 310 LYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 369
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIR--SGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
S+LPA A L + IH Y+ + G + + L+D+Y+KCG + AH +FN
Sbjct: 370 MLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 429
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
I K + W+A+I + HG + + LF+ M + G++P+ +TF +L ACSH G++D
Sbjct: 430 I--LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLD 487
Query: 179 EGLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
G +F+ M + + + P ++HY C+IDLLG +G +A +I M ++P+ +W +LL A
Sbjct: 488 LGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKA 547
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
C H NVELGE A ++EPEN G+Y+LL+N+YA+ GRW +V K R ++N+ G++K+P
Sbjct: 548 CKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVP 607
Query: 298 AQSLVEV 304
S +E+
Sbjct: 608 GCSSIEI 614
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 125/231 (54%), Gaps = 5/231 (2%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F + K WNA++SG+ +EA++LFK M+ +V+PD +T +++ A A
Sbjct: 221 KLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSG 280
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
++ +H ++ GF L++ + L+D+YSKCG L A +F +P KD+I W+ +
Sbjct: 281 SIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY--KDVISWNTL 338
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH-- 190
I Y + A+ LF EM++SG PN VT S+L AC+H+G +D G + ++ K
Sbjct: 339 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK 398
Query: 191 HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
+ T +ID+ + G ++ A+ + ++ + + + W A++ H
Sbjct: 399 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMH 448
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 140/309 (45%), Gaps = 43/309 (13%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
WN + G +S A++L+ M+ + P++ TF +L + A K+ IH +++
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD---------------------- 123
+ G L V + L+ +Y + G L AH +F+ P +D
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221
Query: 124 -------KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGL 176
KD++ W+A+I+ Y + G+ + A+ LF +M+++ V+P++ T +V+ AC+ G
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 281
Query: 177 VDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG 236
++ G + ++ H + +IDL + G L+ A L +P K + W L+G
Sbjct: 282 IELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK-DVISWNTLIG 340
Query: 237 ACVSHENVELGEVAARWTFELEPENTGNYILLANLYAA--------VGRWRDV---EKVR 285
+H N+ E + L T N + + ++ A +GRW V ++++
Sbjct: 341 G-YTHMNL-YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK 398
Query: 286 DMVNEVGLR 294
+ N LR
Sbjct: 399 GVTNASSLR 407
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 217 bits (553), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 179/308 (58%), Gaps = 6/308 (1%)
Query: 1 MYAKC-NCGNLSY--KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPD 57
M C CG++ + K+F ++ WNA++SG+ +REA+ +F M +E V+ +
Sbjct: 180 MVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVN 239
Query: 58 NATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
S+L A L L Q H Y+ R+ + +A+ LVD+Y+KCG + A +F
Sbjct: 240 GVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVF- 298
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLV 177
+++K++ WS+ + +G GE + LF+ M Q GV PN VTF SVL CS VG V
Sbjct: 299 -WGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFV 357
Query: 178 DEGLSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG 236
DEG F M I P ++HY C++DL RAGRL+DA ++I+ MP+KP+ AVW +LL
Sbjct: 358 DEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLH 417
Query: 237 ACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKL 296
A ++N+ELG +A++ ELE N G Y+LL+N+YA W +V VR + G+RK
Sbjct: 418 ASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQ 477
Query: 297 PAQSLVEV 304
P S++EV
Sbjct: 478 PGCSVMEV 485
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 139/332 (41%), Gaps = 69/332 (20%)
Query: 17 KTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE--DVQPDNATFNSLLPAYAILADL 74
++ K N+++ + + ++ ++++L D++PDN T N L+ A L
Sbjct: 65 RSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMR 124
Query: 75 KQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD----------- 123
+ + +H IR GF V + L+ +Y++ G L H +FN IP D
Sbjct: 125 ETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTAC 184
Query: 124 ------------------KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFT 165
+D I W+A+I+ Y + G A+++F+ M GVK N V
Sbjct: 185 ARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMI 244
Query: 166 SVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDA---------- 215
SVL AC+ +G +D+G ++ ++ I V T ++DL + G ++ A
Sbjct: 245 SVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEK 304
Query: 216 ------------------------YNLIRTMPIKPNHAVWGALLGACVSHENVELGEV-- 249
++L++ + PN + ++L C V+ G+
Sbjct: 305 NVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHF 364
Query: 250 -AARWTFELEPENTGNYILLANLYAAVGRWRD 280
+ R F +EP+ +Y L +LYA GR D
Sbjct: 365 DSMRNEFGIEPQ-LEHYGCLVDLYARAGRLED 395
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 217 bits (552), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 106/303 (34%), Positives = 180/303 (59%), Gaps = 3/303 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y+KC + + +F +T KK W ++S ++ + +EA+++F++M ++PD +
Sbjct: 288 YSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSM 347
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
S++ A A L L +A +H + +G L + + L+++Y+KCG L +F +P
Sbjct: 348 FSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP- 406
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
++++ WS++I A HG A+SLF M Q V+PN+VTF VL+ CSH GLV+EG
Sbjct: 407 -RRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGK 465
Query: 182 SLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+F M +++I P ++HY C++DL GRA L +A +I +MP+ N +WG+L+ AC
Sbjct: 466 KIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRI 525
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H +ELG+ AA+ ELEP++ G +L++N+YA RW DV +R ++ E + K S
Sbjct: 526 HGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLS 585
Query: 301 LVE 303
++
Sbjct: 586 RID 588
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 131/296 (44%), Gaps = 49/296 (16%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYA C N + +F + S + WN ++ + L EA +LF++M +V PD
Sbjct: 155 MYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMI 214
Query: 61 FNSLLPA-------------YAILADLKQAMNIH-------------CYLIRSGFLYRLE 94
+++ A Y L + M+ H C + F ++
Sbjct: 215 LCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMS 274
Query: 95 VASILVDI-----YSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLF 149
V ++ V YSKCG L A IF+ + KD++ W+ +I+AY + + + A+ +F
Sbjct: 275 VRNLFVSTAMVSGYSKCGRLDDAQVIFD--QTEKKDLVCWTTMISAYVESDYPQEALRVF 332
Query: 150 NEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRA 209
EM SG+KP+ V+ SV+ AC+++G++D+ + + + + + +I++ +
Sbjct: 333 EEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKC 392
Query: 210 GRLDDAYNLIRTMPIKPNHAVWGALLGACVSH---------------ENVELGEVA 250
G LD ++ MP + N W +++ A H ENVE EV
Sbjct: 393 GGLDATRDVFEKMP-RRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVT 447
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 98/200 (49%), Gaps = 2/200 (1%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N L +S R I ++++ + D +F +L A + ++ L + M +H
Sbjct: 79 FNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAF 138
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+ L V + +D+Y+ CG + YA ++F+ + +D++ W+ +I Y + G + A
Sbjct: 139 KIATLCDPFVETGFMDMYASCGRINYARNVFD--EMSHRDVVTWNTMIERYCRFGLVDEA 196
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDL 205
LF EM S V P+++ +++ AC G + ++++F++++ + T ++ +
Sbjct: 197 FKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTM 256
Query: 206 LGRAGRLDDAYNLIRTMPIK 225
AG +D A R M ++
Sbjct: 257 YAGAGCMDMAREFFRKMSVR 276
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 72/146 (49%), Gaps = 2/146 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + + +F K ++ W+++++ + A +A+ LF +M E+V+P+ T
Sbjct: 388 MYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVT 447
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F +L + +++ I + +LE +VD++ + L A + +
Sbjct: 448 FVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESM 507
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMA 145
P+ +++IW ++++A HG E+
Sbjct: 508 PVA-SNVVIWGSLMSACRIHGELELG 532
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 217 bits (552), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 175/294 (59%), Gaps = 4/294 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
KMF K ++ W A+++GF+ EA+ F++M + V+PD + L A L
Sbjct: 161 KMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLG 220
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
L + +H Y++ F + V++ L+D+Y +CG + +A +F ++ + ++ W+++
Sbjct: 221 ALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVF--YNMEKRTVVSWNSV 278
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM-LKHH 191
I + +G+ ++ F +M + G KP+ VTFT L ACSHVGLV+EGL FQ M +
Sbjct: 279 IVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYR 338
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH-ENVELGEVA 250
I P ++HY C++DL RAGRL+DA L+++MP+KPN V G+LL AC +H N+ L E
Sbjct: 339 ISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERL 398
Query: 251 ARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
+ +L ++ NY++L+N+YAA G+W K+R + +GL+K P S +E+
Sbjct: 399 MKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEI 452
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 114/254 (44%), Gaps = 40/254 (15%)
Query: 17 KTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQ 76
+++ + T W + ++ N EA + F M + V+P++ TF +LL +
Sbjct: 30 QSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSE 89
Query: 77 AMN--IHCYLIRSG----------------------------FLYRLEVASI----LVDI 102
A+ +H Y + G F Y + S+ ++D
Sbjct: 90 ALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDG 149
Query: 103 YSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQV 162
Y + G + A +F+ +P ++D+I W+A+I + K G+ E A+ F EM SGVKP+ V
Sbjct: 150 YMRSGQVDNAAKMFDKMP--ERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYV 207
Query: 163 TFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDA----YNL 218
+ L+AC+++G + GL + +++L V +IDL R G ++ A YN+
Sbjct: 208 AIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNM 267
Query: 219 IRTMPIKPNHAVWG 232
+ + N + G
Sbjct: 268 EKRTVVSWNSVIVG 281
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 24/153 (15%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y +C C + ++F K+ WN+V+ GF N A E++ F++M + +PD T
Sbjct: 250 LYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVT 309
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLY------------RLEVASILVDIYSKCGS 108
F L A + H L+ G Y R+E LVD+YS+ G
Sbjct: 310 FTGALTACS-----------HVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGR 358
Query: 109 LGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGH 141
L A + +P+K +++I S ++AA HG+
Sbjct: 359 LEDALKLVQSMPMKPNEVVIGS-LLAACSNHGN 390
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 215 bits (548), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/337 (33%), Positives = 181/337 (53%), Gaps = 42/337 (12%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + + K+F + ++ WNA++S + H +EA++L++ M DV P+ ++
Sbjct: 92 MYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAM---DVMPNESS 148
Query: 61 FNS------------------------------------LLPAYAILADLKQAMNIHCYL 84
FN+ L+ A + + + IH Y
Sbjct: 149 FNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYA 208
Query: 85 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEM 144
R+ ++ S LV+ Y +CGS+ Y +F+ ++D+D++ WS++I+AY HG E
Sbjct: 209 FRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFD--SMEDRDVVAWSSLISAYALHGDAES 266
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH-IIPLVDHYTCII 203
A+ F EM + V P+ + F +VL ACSH GL DE L F+ M + + DHY+C++
Sbjct: 267 ALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLV 326
Query: 204 DLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTG 263
D+L R GR ++AY +I+ MP KP WGALLGAC ++ +EL E+AAR +EPEN
Sbjct: 327 DVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPA 386
Query: 264 NYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
NY+LL +Y +VGR + E++R + E G++ P S
Sbjct: 387 NYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 105/250 (42%), Gaps = 37/250 (14%)
Query: 30 LSGFIHNSLAREAIQLFKQMLVEDVQP-DNATFNSLLPAYAILADLKQAMNIHCYLIRSG 88
LS + + +A+ LF QM P D F+ L + A ++H + ++S
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 89 FLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSL 148
FL V L+D+Y KC S+ +A +F+ IP ++ ++W+A+I+ Y G + AV L
Sbjct: 79 FLSNPFVGCALLDMYGKCLSVSHARKLFDEIP--QRNAVVWNAMISHYTHCGKVKEAVEL 136
Query: 149 FN---------------------------------EMVQSGVKPNQVTFTSVLHACSHVG 175
+ +M++ KPN +T +++ ACS +G
Sbjct: 137 YEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIG 196
Query: 176 LVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ + ++ I P + +++ GR G + + +M + + W +L+
Sbjct: 197 AFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDR-DVVAWSSLI 255
Query: 236 GACVSHENVE 245
A H + E
Sbjct: 256 SAYALHGDAE 265
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 175/293 (59%), Gaps = 7/293 (2%)
Query: 17 KTSKKRTAP----WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K +K AP W A+ SG N R A+++F +M E V P+ AT ++LL L+
Sbjct: 351 KMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLS 410
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
L +H + +R + VA+ LVD+Y K G L A IF +K+K + W+ +
Sbjct: 411 LLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIF--WGIKNKSLASWNCM 468
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML-KHH 191
+ Y G GE ++ F+ M+++G++P+ +TFTSVL C + GLV EG F M ++
Sbjct: 469 LMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYG 528
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
IIP ++H +C++DLLGR+G LD+A++ I+TM +KP+ +WGA L +C H ++EL E+A
Sbjct: 529 IIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAW 588
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
+ LEP N+ NY+++ NLY+ + RW DVE++R+++ +R S +++
Sbjct: 589 KRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQI 641
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 115/226 (50%), Gaps = 7/226 (3%)
Query: 20 KKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMN 79
K WN++LSG+ L+++AI + K+M + ++P ++ +SLL A A LK
Sbjct: 187 KPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKA 246
Query: 80 IHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKH 139
IH Y++R+ Y + V + L+D+Y K G L YA +F++ + K+I+ W+++++
Sbjct: 247 IHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDM--MDAKNIVAWNSLVSGLSYA 304
Query: 140 GHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHY 199
+ A +L M + G+KP+ +T+ S+ + +G ++ L + M + + P V +
Sbjct: 305 CLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSW 364
Query: 200 TCIIDLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALLG--ACVS 240
T I + G +A + M + PN A LL C+S
Sbjct: 365 TAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLS 410
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 107/211 (50%), Gaps = 2/211 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y +C + K+F + K+ WN ++ + + +A++LF++M + ++T
Sbjct: 33 YGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTM 92
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
LL + + IH Y++R G + + + L+ +YS+ G L + +FN +
Sbjct: 93 VKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFN--SM 150
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
KD+++ W++I+++Y K G+ + A+ L +EM G+KP+ VT+ S+L + GL + +
Sbjct: 151 KDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAI 210
Query: 182 SLFQFMLKHHIIPLVDHYTCIIDLLGRAGRL 212
++ + M + P + ++ + G L
Sbjct: 211 AVLKRMQIAGLKPSTSSISSLLQAVAEPGHL 241
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 4/162 (2%)
Query: 77 AMNIHCYLIRSGFLYR-LEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAA 135
+ IH LI+ G V S + Y +C SLG+A+ +F+ +P +D + W+ I+
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDD--LAWNEIVMV 63
Query: 136 YGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPL 195
+ G+ E AV LF EM SG K T +L CS+ EG + ++L+ +
Sbjct: 64 NLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESN 123
Query: 196 VDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
V +I + R G+L+ + + +M + N + W ++L +
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMKDR-NLSSWNSILSS 164
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 4/147 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY K + ++F K A WN +L G+ E I F ML ++PD T
Sbjct: 440 MYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAIT 499
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRS--GFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
F S+L + + L Q + L+RS G + +E S +VD+ + G L A
Sbjct: 500 FTSVL-SVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQT 558
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+ LK D IW A +++ H E+A
Sbjct: 559 MSLK-PDATIWGAFLSSCKIHRDLELA 584
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 214 bits (545), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 176/305 (57%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y KC + K F + +K W++++ G+ EA+ LFK++ + Q D+
Sbjct: 256 LYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFA 315
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+S++ +A A L+Q + ++ V + +VD+Y KCG + A F +
Sbjct: 316 LSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQ 375
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
LKD +I W+ +I YGKHG G+ +V +F EM++ ++P++V + +VL ACSH G++ EG
Sbjct: 376 LKD--VISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEG 433
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
LF +L+ H I P V+HY C++DLLGRAGRL +A +LI TMPIKPN +W LL C
Sbjct: 434 EELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCR 493
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H ++ELG+ + ++ +N NY++++NLY G W + R++ N GL+K
Sbjct: 494 VHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGM 553
Query: 300 SLVEV 304
S VE+
Sbjct: 554 SWVEI 558
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 129/249 (51%), Gaps = 6/249 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC ++YK+F ++ W+A++SG + N + ++ LF +M + + P+ T
Sbjct: 50 MYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFT 109
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F++ L A +L L++ + IH + ++ GF +EV + LVD+YSKCG + A +F I
Sbjct: 110 FSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIV 169
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVK--PNQVTFTSVLHACSHVGLVD 178
D+ +I W+A+IA + G+G A+ F M ++ +K P++ T TS+L ACS G++
Sbjct: 170 --DRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIY 227
Query: 179 EGLSLFQFMLKH--HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG 236
G + F+++ H ++DL + G L A + K + +LG
Sbjct: 228 AGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILG 287
Query: 237 ACVSHENVE 245
E VE
Sbjct: 288 YAQEGEFVE 296
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 97/164 (59%), Gaps = 3/164 (1%)
Query: 76 QAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAA 135
Q +HCYL++SG L ++ L+D+Y KC A+ +F+ +P +++++ WSA+++
Sbjct: 24 QGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP--ERNVVSWSALMSG 81
Query: 136 YGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPL 195
+ +G + ++SLF+EM + G+ PN+ TF++ L AC + +++GL + F LK +
Sbjct: 82 HVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMM 141
Query: 196 VDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
V+ ++D+ + GR+++A + R + + + W A++ V
Sbjct: 142 VEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAMIAGFV 184
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 213 bits (543), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 110/280 (39%), Positives = 170/280 (60%), Gaps = 4/280 (1%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
WN ++ G N + L+K M + +P+ TF ++L + + LA Q IH I
Sbjct: 160 WNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAI 219
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+ G + V S L+ +YSKCG LG A F+ +D+D ++WS++I+AYG HG G+ A
Sbjct: 220 KIGASSVVAVVSSLISMYSKCGCLGDAAKAFS--EREDEDEVMWSSMISAYGFHGQGDEA 277
Query: 146 VSLFNEMV-QSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML-KHHIIPLVDHYTCII 203
+ LFN M Q+ ++ N+V F ++L+ACSH GL D+GL LF M+ K+ P + HYTC++
Sbjct: 278 IELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVV 337
Query: 204 DLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTG 263
DLLGRAG LD A +IR+MPIK + +W LL AC H+N E+ + + +++P ++
Sbjct: 338 DLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSA 397
Query: 264 NYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVE 303
Y+LLAN++A+ RWRDV +VR + + ++K S E
Sbjct: 398 CYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFE 437
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 111/246 (45%), Gaps = 7/246 (2%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F + ++ WNA+++G I E + LF++M PD T S+ A L
Sbjct: 46 KVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLR 105
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
+ IH Y I+ G L V S L +Y + G L + +P+ ++++ W+ +
Sbjct: 106 SVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPV--RNLVAWNTL 163
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
I ++G E + L+ M SG +PN++TF +VL +CS + + +G + +K
Sbjct: 164 IMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGA 223
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH----ENVELGE 248
+V + +I + + G L DA + +W +++ A H E +EL
Sbjct: 224 SSVVAVVSSLISMYSKCGCLGDAAKAFSERE-DEDEVMWSSMISAYGFHGQGDEAIELFN 282
Query: 249 VAARWT 254
A T
Sbjct: 283 TMAEQT 288
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNA 59
MY+KC C + K F + + W++++S + + EAI+LF M + +++ +
Sbjct: 236 MYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEV 295
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLI-RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
F +LL A + + + + ++ + GF L+ + +VD+ + G L A I
Sbjct: 296 AFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRS 355
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPN 160
+P+K DI+IW +++A H + EMA +F E++Q + PN
Sbjct: 356 MPIK-TDIVIWKTLLSACNIHKNAEMAQRVFKEILQ--IDPN 394
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 176/304 (57%), Gaps = 3/304 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YAKC + + K+F + S K WN V+ G+ + +A +F++ L V T
Sbjct: 392 VYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVT 451
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F+S L A A LA + + +H I++ ++ V++ L+D+Y+KCG + +A +FN
Sbjct: 452 FSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFN--E 509
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++ D+ W+A+I+ Y HG G A+ + + M KPN +TF VL CS+ GL+D+G
Sbjct: 510 METIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQG 569
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F+ M++ H I P ++HYTC++ LLGR+G+LD A LI +P +P+ +W A+L A +
Sbjct: 570 QECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASM 629
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
+ N E +A ++ P++ Y+L++N+YA +W +V +R + E+G++K P
Sbjct: 630 NQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGL 689
Query: 300 SLVE 303
S +E
Sbjct: 690 SWIE 693
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 116/247 (46%), Gaps = 8/247 (3%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y+ C + + +F K W ++S ++ N ++++L M + P+N TF
Sbjct: 191 YSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTF 250
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
++ L A L A +H ++++ ++ V L+ +Y++ G + A +FN +P
Sbjct: 251 DTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMP- 309
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
D++ WS +IA + ++G AV LF M ++ V PN+ T +S+L+ C+ G
Sbjct: 310 -KNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGE 368
Query: 182 SLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
L ++K + +ID+ + ++D A L + K N W ++ V +
Sbjct: 369 QLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK-NEVSWNTVI---VGY 424
Query: 242 ENVELGE 248
EN LGE
Sbjct: 425 EN--LGE 429
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 88/184 (47%), Gaps = 2/184 (1%)
Query: 40 REAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASIL 99
++ I L+ ++ E + + F S L + L + +H +++ G+ V + L
Sbjct: 128 QDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAAL 187
Query: 100 VDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKP 159
++ YS CGS+ A +F I KDI++W+ I++ Y ++G+ E ++ L + M +G P
Sbjct: 188 INAYSVCGSVDSARTVFEGILC--KDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMP 245
Query: 160 NQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLI 219
N TF + L A +G D + +LK + ++ L + G + DA+ +
Sbjct: 246 NNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVF 305
Query: 220 RTMP 223
MP
Sbjct: 306 NEMP 309
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 175/288 (60%), Gaps = 8/288 (2%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQ--PDNATFNSLLPAYAIL 71
+F ++ +K WNA++SGF HN E ++ F +L +V+ PD T ++LL
Sbjct: 443 LFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVST 502
Query: 72 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
+ L H Y++R G + + L+++YS+CG++ + +FN + +KD++ W++
Sbjct: 503 SSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFN--QMSEKDVVSWNS 560
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSG-VKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
+I+AY +HG GE AV+ + M G V P+ TF++VL ACSH GLV+EGL +F M++
Sbjct: 561 LISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEF 620
Query: 191 H-IIPLVDHYTCIIDLLGRAGRLDDAYNLIR--TMPIKPNHAVWGALLGACVSHENVELG 247
H +I VDH++C++DLLGRAG LD+A +L++ I VW AL AC +H +++LG
Sbjct: 621 HGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLG 680
Query: 248 EVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRK 295
++ A+ E E ++ Y+ L+N+YA G W++ E+ R +N +G K
Sbjct: 681 KMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMK 728
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 126/288 (43%), Gaps = 50/288 (17%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+ ++K+F +K WN ++S + L + A+ ++K+M + V+PD T
Sbjct: 332 MYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFT 391
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F SLL A DL + +I+ G ++E+++ L+ YSK G + A +F
Sbjct: 392 FGSLL---ATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFE-RS 447
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVK--PNQVTFTSVLHAC------- 171
L+ K++I W+AII+ + +G + F+ +++S V+ P+ T +++L C
Sbjct: 448 LR-KNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLM 506
Query: 172 ----------------------------SHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
S G + L +F M + ++ + +I
Sbjct: 507 LGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVS----WNSLI 562
Query: 204 DLLGRAGRLDDAYNLIRTM----PIKPNHAVWGALLGACVSHENVELG 247
R G ++A N +TM + P+ A + A+L AC VE G
Sbjct: 563 SAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEG 610
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 34/195 (17%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQM-LVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
N L+G + R A++LF + ++PD + + + L D +HCY I
Sbjct: 25 NRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAI 84
Query: 86 RSGFLYRLEVASILVDIYSKCGSLG-------------------------------YAHH 114
RSG L V++ L+ +Y + G+L YA
Sbjct: 85 RSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFE 144
Query: 115 IFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHV 174
+F+ +P +D D+ IW+A+I + G+ E +V LF EM + GV+ ++ F ++L C +
Sbjct: 145 VFDKMPERD-DVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDY- 202
Query: 175 GLVDEGLSLFQFMLK 189
G +D G + ++K
Sbjct: 203 GSLDFGKQVHSLVIK 217
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 108/209 (51%), Gaps = 15/209 (7%)
Query: 30 LSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGF 89
L+GF + E++ +F++ML ++P + TF S++ + + A +H I++G+
Sbjct: 267 LAGFKRD----ESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVHGLAIKTGY 319
Query: 90 LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLF 149
V++ + +YS G AH +F L++KD++ W+ +I++Y + G+ A+S++
Sbjct: 320 EKYTLVSNATMTMYSSFEDFGAAHKVFE--SLEEKDLVTWNTMISSYNQAKLGKSAMSVY 377
Query: 150 NEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQ-FMLKHHIIPLVDHYTCIIDLLGR 208
M GVKP++ TF S+L + + L + Q ++K + ++ +I +
Sbjct: 378 KRMHIIGVKPDEFTFGSLLATSLDLDV----LEMVQACIIKFGLSSKIEISNALISAYSK 433
Query: 209 AGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
G+++ A +L+ ++ N W A++
Sbjct: 434 NGQIEKA-DLLFERSLRKNLISWNAIISG 461
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 85/165 (51%), Gaps = 7/165 (4%)
Query: 11 SYKMFMKTSKKR-TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPA-- 67
++++F K ++ A WNA+++G + +++LF++M V+ D F ++L
Sbjct: 142 AFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCD 201
Query: 68 YAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDII 127
Y L KQ +H +I++GF V + L+ +Y C + A +F + +D +
Sbjct: 202 YGSLDFGKQ---VHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQV 258
Query: 128 IWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACS 172
++ +I E ++ +F +M+++ ++P +TF SV+ +CS
Sbjct: 259 TFNVVIDGLAGFKRDE-SLLVFRKMLEASLRPTDLTFVSVMGSCS 302
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 12/160 (7%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNA 59
MY++C S ++F + S+K WN+++S + + A+ +K M E V PD A
Sbjct: 533 MYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAA 592
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIR-SGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
TF+++L A + +++ + I ++ G + ++ S LVD+ + G L A ++
Sbjct: 593 TFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAE---SL 649
Query: 119 IPLKDKDI----IIWSAIIAAYGKHGH---GEMAVSLFNE 151
+ + +K I +W A+ +A HG G+M L E
Sbjct: 650 VKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLME 689
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 213 bits (542), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/301 (37%), Positives = 175/301 (58%), Gaps = 6/301 (1%)
Query: 8 GNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLL 65
GNL + +F + K W ++ G+ N REAI +F +M+ E + PD T ++++
Sbjct: 980 GNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVI 1039
Query: 66 PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKD 125
A A L L+ +H Y +++GF+ + + S LVD+YSKCGSL A +F +P K+
Sbjct: 1040 SACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLP--KKN 1097
Query: 126 IIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQ 185
+ W++II HG + A+ +F +M VKPN VTF SV AC+H GLVDEG +++
Sbjct: 1098 LFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYR 1157
Query: 186 FMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENV 244
M+ + I+ V+HY ++ L +AG + +A LI M +PN +WGALL C H+N+
Sbjct: 1158 SMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNL 1217
Query: 245 ELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKL-PAQSLVE 303
+ E+A LEP N+G Y LL ++YA RWRDV ++R + E+G+ K+ P S +
Sbjct: 1218 VIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIR 1277
Query: 304 V 304
+
Sbjct: 1278 I 1278
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 128/278 (46%), Gaps = 67/278 (24%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+NA+ GF+ S +++L+ +ML + V P + T++SL+ A + + +++ H +
Sbjct: 839 YNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIW-- 896
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAY--------- 136
+ GF + +++ + L+D YS G + A +F+ +P ++D I W+ +++AY
Sbjct: 897 KFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMP--ERDDIAWTTMVSAYRRVLDMDSA 954
Query: 137 --------------------GKHGHG--EMAVSLFNE----------------------- 151
G G G E A SLFN+
Sbjct: 955 NSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYR 1014
Query: 152 --------MVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
M++ G+ P++VT ++V+ AC+H+G+++ G + + L++ + V + ++
Sbjct: 1015 EAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALV 1074
Query: 204 DLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
D+ + G L+ A + +P K N W +++ +H
Sbjct: 1075 DMYSKCGSLERALLVFFNLP-KKNLFCWNSIIEGLAAH 1111
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 75/154 (48%), Gaps = 2/154 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC + +F KK WN+++ G + A+EA+++F +M +E V+P+ T
Sbjct: 1076 MYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVT 1135
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F S+ A + + I+ +I + +E +V ++SK G + A + +
Sbjct: 1136 FVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNM 1195
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMV 153
+ + +IW A++ H + +A FN+++
Sbjct: 1196 EF-EPNAVIWGALLDGCRIHKNLVIAEIAFNKLM 1228
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 213 bits (542), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/301 (35%), Positives = 177/301 (58%), Gaps = 11/301 (3%)
Query: 6 NCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNS---LAREAIQLFKQMLVEDVQPDNAT 60
NCG L + +F + + A WN +L+ + ++ E + LF +M V+P+ +
Sbjct: 162 NCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM---QVRPNELS 218
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L+ + A L + + + H Y++++ V + L+D+YSKCG L +A +F+
Sbjct: 219 LVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFD--E 276
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ +D+ ++A+I HG G+ + L+ ++ G+ P+ TF + ACSH GLVDEG
Sbjct: 277 MSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEG 336
Query: 181 LSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
L +F M + I P V+HY C++DLLGR+GRL++A I+ MP+KPN +W + LG+
Sbjct: 337 LQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQ 396
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
+H + E GE+A + LE EN+GNY+LL+N+YA V RW DVEK R+++ + + K P
Sbjct: 397 THGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGI 456
Query: 300 S 300
S
Sbjct: 457 S 457
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y+KC C + + K+F + S++ + +NA++ G + +E I+L+K ++ + + PD+AT
Sbjct: 260 LYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSAT 319
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F + A + + + + I + G ++E LVD+ + G L A +
Sbjct: 320 FVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKM 379
Query: 120 PLKDKDIIIWSAIIAAYGKHG---HGEMAV 146
P+K + +W + + + HG GE+A+
Sbjct: 380 PVK-PNATLWRSFLGSSQTHGDFERGEIAL 408
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/306 (36%), Positives = 181/306 (59%), Gaps = 4/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNA 59
MY +C LS +F K K A W++++S + E + LF+ M E +++ + +
Sbjct: 176 MYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEES 235
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
S L A A L M+IH +L+R+ + V + LVD+Y KCG L A HIF
Sbjct: 236 GMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQ-- 293
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
++ ++ + +SA+I+ HG GE A+ +F++M++ G++P+ V + SVL+ACSH GLV E
Sbjct: 294 KMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKE 353
Query: 180 GLSLFQFMLKH-HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G +F MLK + P +HY C++DLLGRAG L++A I+++PI+ N +W L C
Sbjct: 354 GRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQC 413
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
+N+ELG++AA+ +L N G+Y+L++NLY+ W DV + R + GL++ P
Sbjct: 414 RVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPG 473
Query: 299 QSLVEV 304
S+VE+
Sbjct: 474 FSIVEL 479
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 122/257 (47%), Gaps = 13/257 (5%)
Query: 3 AKC------NCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQP 56
AKC N N + +F T +N ++ G+++ EA+ + +M+ +P
Sbjct: 71 AKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEP 130
Query: 57 DNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 116
DN T+ LL A L +++ IH + + G + V + L+++Y +CG + + +F
Sbjct: 131 DNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVF 190
Query: 117 NIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMV-QSGVKPNQVTFTSVLHACSHVG 175
L+ K WS++++A G + LF M ++ +K + S L AC++ G
Sbjct: 191 E--KLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTG 248
Query: 176 LVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
++ G+S+ F+L++ + T ++D+ + G LD A ++ + M K N+ + A++
Sbjct: 249 ALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKME-KRNNLTYSAMI 307
Query: 236 GACVSHENVELGEVAAR 252
H GE A R
Sbjct: 308 SGLALHGE---GESALR 321
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/306 (36%), Positives = 182/306 (59%), Gaps = 5/306 (1%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNAT 60
YAK + +F ++ WN ++ G+ + +A+ LF+++L E +PD T
Sbjct: 202 YAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEIT 261
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ L A + + L+ IH ++ S ++V + L+D+YSKCGSL A +FN P
Sbjct: 262 VVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTP 321
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSVLHACSHVGLVDE 179
KDI+ W+A+IA Y HG+ + A+ LFNEM +G++P +TF L AC+H GLV+E
Sbjct: 322 --RKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNE 379
Query: 180 GLSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G+ +F+ M + + I P ++HY C++ LLGRAG+L AY I+ M + + +W ++LG+C
Sbjct: 380 GIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSC 439
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H + LG+ A + L +N+G Y+LL+N+YA+VG + V KVR+++ E G+ K P
Sbjct: 440 KLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPG 499
Query: 299 QSLVEV 304
S +E+
Sbjct: 500 ISTIEI 505
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 110/236 (46%), Gaps = 35/236 (14%)
Query: 36 NSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEV 95
N L +A L+ Q+L ++ P+ TF+SLL + + K IH ++++ G V
Sbjct: 108 NGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYV 163
Query: 96 ASILVDIYSKCGSLGYAHHIFNIIPLK-----------------------------DKDI 126
A+ LVD+Y+K G + A +F+ +P + ++DI
Sbjct: 164 ATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDI 223
Query: 127 IIWSAIIAAYGKHGHGEMAVSLFNEMVQSGV-KPNQVTFTSVLHACSHVGLVDEGLSLFQ 185
+ W+ +I Y +HG A+ LF +++ G KP+++T + L ACS +G ++ G +
Sbjct: 224 VSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHV 283
Query: 186 FMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
F+ I V T +ID+ + G L++A + P K + W A++ H
Sbjct: 284 FVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRK-DIVAWNAMIAGYAMH 338
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 72/142 (50%), Gaps = 3/142 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQML-VEDVQPDNA 59
MY+KC + +F T +K WNA+++G+ + +++A++LF +M + +QP +
Sbjct: 303 MYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDI 362
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
TF L A A + + + I + + G ++E LV + + G L A+
Sbjct: 363 TFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKN 422
Query: 119 IPLKDKDIIIWSAIIAAYGKHG 140
+ + D D ++WS+++ + HG
Sbjct: 423 MNM-DADSVLWSSVLGSCKLHG 443
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/281 (38%), Positives = 159/281 (56%), Gaps = 3/281 (1%)
Query: 25 PWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYL 84
PWNA++SG++ L +E + ++ M + PD TF S+ A + L L+ H +
Sbjct: 176 PWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVM 235
Query: 85 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEM 144
I+ + V S LVD+Y KC S H +F+ L +++I W+++I+ YG HG
Sbjct: 236 IKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFD--QLSTRNVITWTSLISGYGYHGKVSE 293
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH-IIPLVDHYTCII 203
+ F +M + G +PN VTF VL AC+H GLVD+G F M + + I P HY ++
Sbjct: 294 VLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMV 353
Query: 204 DLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTG 263
D LGRAGRL +AY + P K + VWG+LLGAC H NV+L E+AA EL+P N G
Sbjct: 354 DTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGG 413
Query: 264 NYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
NY++ AN YA+ G KVR + G++K P S +E+
Sbjct: 414 NYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIEL 454
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 101/230 (43%), Gaps = 6/230 (2%)
Query: 15 FMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADL 74
F ++++T + L G +EA+ L + +Q + T+ LL +
Sbjct: 68 FQVENQRKTEKLDKTLKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEY 124
Query: 75 KQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIA 134
+ IH + GF + L+ +Y+ G L A +F LK +D+I W+A+I+
Sbjct: 125 TKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFR--SLKIRDLIPWNAMIS 182
Query: 135 AYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIP 194
Y + G + + ++ +M Q+ + P+Q TF SV ACS + ++ G M+K I
Sbjct: 183 GYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKS 242
Query: 195 LVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENV 244
+ + ++D+ + D + + + + N W +L+ H V
Sbjct: 243 NIIVDSALVDMYFKCSSFSDGHRVFDQLSTR-NVITWTSLISGYGYHGKV 291
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 212 bits (540), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/303 (37%), Positives = 174/303 (57%), Gaps = 3/303 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC L+ +++ + + ++++SG+ + L ++ LF+ M++ D+
Sbjct: 595 MYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFA 654
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+S+L A A+ + +H Y+ + G V S L+ +YSK GS+ F+ I
Sbjct: 655 ISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQI- 713
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
D+I W+A+IA+Y +HG A+ ++N M + G KP++VTF VL ACSH GLV+E
Sbjct: 714 -NGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEES 772
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
M+K + I P HY C++D LGR+GRL +A + I M IKP+ VWG LL AC
Sbjct: 773 YFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACK 832
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H VELG+VAA+ ELEP + G YI L+N+ A VG W +VE+ R ++ G++K P
Sbjct: 833 IHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGW 892
Query: 300 SLV 302
S V
Sbjct: 893 SSV 895
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 147/321 (45%), Gaps = 44/321 (13%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y+KC SYK+F K A W +++SGF REAI LF +ML + PD +T
Sbjct: 494 LYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDEST 553
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
++L + L + IH Y +R+G +++ S LV++YSKCGSL A +++ +P
Sbjct: 554 LAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHAC--------- 171
+ D + S++I+ Y +HG + LF +MV SG + +S+L A
Sbjct: 614 --ELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLG 671
Query: 172 -------SHVGLVDE---GLSLFQFMLKHHII------------PLVDHYTCIIDLLGRA 209
+ +GL E G SL K I P + +T +I +
Sbjct: 672 AQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQH 731
Query: 210 GRLDDA---YNLIRTMPIKPNHAVWGALLGAC-----VSHENVELGEVAARWTFELEPEN 261
G+ ++A YNL++ KP+ + +L AC V L + + +EPEN
Sbjct: 732 GKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYG--IEPEN 789
Query: 262 TGNYILLANLYAAVGRWRDVE 282
+Y+ + + GR R+ E
Sbjct: 790 R-HYVCMVDALGRSGRLREAE 809
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 3/203 (1%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
+YK+F + WN +++G + N LF +M V +PD+ T++S+L A A
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACAS 263
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
L L+ + +I+ G + V + +VD+Y+KCG + A +F+ IP + ++ W+
Sbjct: 264 LEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIP--NPSVVSWT 320
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
+++ Y K A+ +F EM SGV+ N T TSV+ AC +V E + ++ K
Sbjct: 321 VMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKS 380
Query: 191 HIIPLVDHYTCIIDLLGRAGRLD 213
+I + ++G +D
Sbjct: 381 GFYLDSSVAAALISMYSKSGDID 403
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 123/238 (51%), Gaps = 7/238 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YAKC + ++F + W +LSG+ ++ A A+++FK+M V+ +N T
Sbjct: 294 LYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCT 353
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF-NII 119
S++ A + + +A +H ++ +SGF VA+ L+ +YSK G + + +F ++
Sbjct: 354 VTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLD 413
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
++ ++I+ + +I ++ + A+ LF M+Q G++ ++ + S+L + L
Sbjct: 414 DIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNL--- 468
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
G + + LK ++ + + + L + G L+++Y L + +P K N A W +++
Sbjct: 469 GKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDN-ACWASMISG 525
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 107/229 (46%), Gaps = 12/229 (5%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F + N ++SG+ + L E+++ F +M + + ++ S++ A + L
Sbjct: 105 KLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQ 164
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
+ + C+ I+ G+ + V S L+D++SK A+ +F ++ W+ I
Sbjct: 165 APLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFR--DSLSANVYCWNTI 222
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
IA ++ + LF+EM KP+ T++SVL AC+ + E L F +++ +
Sbjct: 223 IAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASL----EKLR-FGKVVQARV 277
Query: 193 IPL--VDHYTC--IIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
I D + C I+DL + G + +A + +P P+ W +L
Sbjct: 278 IKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIP-NPSVVSWTVMLSG 325
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 41/251 (16%)
Query: 71 LADLKQAMNIHCYLIRSGFL-YRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIW 129
L +L+ + +L+R L + + + L+ YS GS+ A +F+ IP D++
Sbjct: 61 LCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIP--QPDVVSC 118
Query: 130 SAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACS--HVGLVDEGLSLFQFM 187
+ +I+ Y +H E ++ F++M G + N++++ SV+ ACS L E +
Sbjct: 119 NIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIK 178
Query: 188 LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIR--------------------------- 220
+ + +V+ + +ID+ + R +DAY + R
Sbjct: 179 MGYFFYEVVE--SALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVF 236
Query: 221 ----TMPI---KPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYILLANLYA 273
M + KP+ + ++L AC S E + G+V + E+ + +LYA
Sbjct: 237 DLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYA 296
Query: 274 AVGRWRDVEKV 284
G + +V
Sbjct: 297 KCGHMAEAMEV 307
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 212 bits (540), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 192/336 (57%), Gaps = 36/336 (10%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRT-APWNAVLSGFIHNS----------------------- 37
YAKC ++K+F+ S++RT +N++LSG++++
Sbjct: 480 YAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLM 539
Query: 38 --------LAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGF 89
EAI +F+++ ++P+ T +LLP A LA L H Y+IR G
Sbjct: 540 VRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGG- 598
Query: 90 LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLF 149
L + + L+D+Y+KCGSL +A+ +F +D+++++A++A Y HG G+ A+ ++
Sbjct: 599 LGDIRLKGTLLDVYAKCGSLKHAYSVFQ--SDARRDLVMFTAMVAGYAVHGRGKEALMIY 656
Query: 150 NEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK-HHIIPLVDHYTCIIDLLGR 208
+ M +S +KP+ V T++L AC H GL+ +GL ++ + H + P ++ Y C +DL+ R
Sbjct: 657 SHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIAR 716
Query: 209 AGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYILL 268
GRLDDAY+ + MP++PN +WG LL AC ++ ++LG A + E ++TGN++L+
Sbjct: 717 GGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLI 776
Query: 269 ANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
+N+YAA +W V ++R+++ + ++K S +EV
Sbjct: 777 SNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEV 812
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 109/233 (46%), Gaps = 9/233 (3%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
+Y F + K WNA+++GF N++ +A + F ML E +P+ AT ++LP A
Sbjct: 177 AYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCAS 236
Query: 71 LAD---LKQAMNIHCYLI-RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDI 126
+ + IH Y++ RS + V + LV Y + G + A +F + KD+
Sbjct: 237 MDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFT--RMGSKDL 294
Query: 127 IIWSAIIAAYGKHGHGEMAVSLFNEMVQSG-VKPNQVTFTSVLHACSHVGLVDEGLSLFQ 185
+ W+ +IA Y + A LF+ +V G V P+ VT S+L C+ + + G +
Sbjct: 295 VSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHS 354
Query: 186 FMLKH-HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
++L+H +++ +I R G AY M K + W A+L A
Sbjct: 355 YILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTK-DIISWNAILDA 406
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 11/232 (4%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQM-LVEDVQPDNA 59
MYAKC + KMF + WN VL+G + S RE ++ FK M ++ +P +
Sbjct: 65 MYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTG-LSVSCGRETMRFFKAMHFADEPKPSSV 123
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSL-GYAHHIFNI 118
TF +LP L D ++H Y+I++G V + LV +Y+K G + A+ F+
Sbjct: 124 TFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDG 183
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVG--- 175
I DKD++ W+AIIA + ++ A F M++ +PN T +VL C+ +
Sbjct: 184 IA--DKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNI 241
Query: 176 LVDEGLSLFQFMLKHHIIPLVDHYTC--IIDLLGRAGRLDDAYNLIRTMPIK 225
G + ++++ + + C ++ R GR+++A +L M K
Sbjct: 242 ACRSGRQIHSYVVQRSWLQ-THVFVCNSLVSFYLRVGRIEEAASLFTRMGSK 292
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 134/287 (46%), Gaps = 27/287 (9%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNATFNSLLPAYAIL 71
+F + K WN V++G+ N +A QLF ++ + DV PD+ T S+LP A L
Sbjct: 284 SLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQL 343
Query: 72 ADLKQAMNIHCYLIRSGFLYR-LEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
DL IH Y++R +L V + L+ Y++ G A+ F++ + KDII W+
Sbjct: 344 TDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSL--MSTKDIISWN 401
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHV---GLVDE--GLSLFQ 185
AI+ A+ ++L + ++ + + VT S+L C +V G V E G S+
Sbjct: 402 AILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKA 461
Query: 186 FMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV---SHE 242
+L P + + ++D + G ++ A+ + + + + +LL V SH+
Sbjct: 462 GLLHDEEEPKLGN--ALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHD 519
Query: 243 NVELGEVAARWTFELEPENTGNYILLANLYA-------AVGRWRDVE 282
+ ++ E+ + + L+ +YA A+G +R+++
Sbjct: 520 DAQM------LFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQ 560
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 108/253 (42%), Gaps = 34/253 (13%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YA+ + +Y F S K WNA+L F + + + L +L E + D+ T
Sbjct: 376 YARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTI 435
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLE---VASILVDIYSKCGSLGYAHHIF-- 116
SLL + + + +H Y +++G L+ E + + L+D Y+KCG++ YAH IF
Sbjct: 436 LSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLG 495
Query: 117 ----------------------------NIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSL 148
+ D+ WS ++ Y + A+ +
Sbjct: 496 LSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGV 555
Query: 149 FNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGR 208
F E+ G++PN VT ++L C+ + + ++++ + + T ++D+ +
Sbjct: 556 FREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIRLKGT-LLDVYAK 614
Query: 209 AGRLDDAYNLIRT 221
G L AY++ ++
Sbjct: 615 CGSLKHAYSVFQS 627
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 78/157 (49%), Gaps = 4/157 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YAKC +Y +F +++ + A+++G+ + +EA+ ++ M +++PD+
Sbjct: 611 VYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVF 670
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRS--GFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
++L A ++ + I+ IR+ G +E + VD+ ++ G L A+
Sbjct: 671 ITTMLTACCHAGLIQDGLQIY-DSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQ 729
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS 155
+P+ + + IW ++ A + ++ S+ N ++Q+
Sbjct: 730 MPV-EPNANIWGTLLRACTTYNRMDLGHSVANHLLQA 765
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 99/234 (42%), Gaps = 10/234 (4%)
Query: 40 REAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASIL 99
R+ +Q F+ L+ D+ F ++ A A ++DL +H + + G + EV+ +
Sbjct: 5 RQFVQNFR--LLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSV 62
Query: 100 VDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEM-VQSGVK 158
+++Y+KC + +F + D ++W+ ++ G + F M K
Sbjct: 63 LNMYAKCRRMDDCQKMFR--QMDSLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPK 119
Query: 159 PNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRL-DDAYN 217
P+ VTF VL C +G G S+ +++K + ++ + + G + DAY
Sbjct: 120 PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYT 179
Query: 218 LIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYILLANL 271
+ K + W A++ EN + + + L+ NY +AN+
Sbjct: 180 AFDGIADK-DVVSWNAIIAG--FSENNMMADAFRSFCLMLKEPTEPNYATIANV 230
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/305 (36%), Positives = 176/305 (57%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + S +F + WNA+L+ H+ E ++L +M V D +
Sbjct: 491 MYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFS 550
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F+ L A A LA L++ +H ++ GF + + + D+YSKCG +G + + P
Sbjct: 551 FSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKM--LPP 608
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++ + W+ +I+A G+HG+ E + F+EM++ G+KP VTF S+L ACSH GLVD+G
Sbjct: 609 SVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKG 668
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
L+ + + + + P ++H C+IDLLGR+GRL +A I MP+KPN VW +LL +C
Sbjct: 669 LAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCK 728
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H N++ G AA +LEPE+ Y+L +N++A GRW DVE VR + ++K A
Sbjct: 729 IHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQAC 788
Query: 300 SLVEV 304
S V++
Sbjct: 789 SWVKL 793
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 133/274 (48%), Gaps = 17/274 (6%)
Query: 8 GNLSYK--MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLL 65
GN+ Y +F + S++ T WN++ + + N E+ ++F M + ++ T ++LL
Sbjct: 192 GNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLL 251
Query: 66 PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKD 125
+ K IH +++ GF + V + L+ +Y+ G A+ +F +P KD
Sbjct: 252 SVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKD-- 309
Query: 126 IIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHAC-----SHVGLVDEG 180
+I W++++A++ G A+ L M+ SG N VTFTS L AC G + G
Sbjct: 310 LISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHG 369
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
L + + + II ++ + G+ G + ++ ++ MP + + W AL+G
Sbjct: 370 LVVVSGLFYNQIIG-----NALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGGYAE 423
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAA 274
E+ + +AA T +E ++ NYI + ++ +A
Sbjct: 424 DEDPDKA-LAAFQTMRVEGVSS-NYITVVSVLSA 455
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 116/240 (48%), Gaps = 6/240 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y +C S K+F + + W +++ G+ E I ++K M E V + +
Sbjct: 89 VYGLVSC---SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENS 145
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ ++ + +L D I +++SG +L V + L+ + G++ YA++IF+
Sbjct: 146 MSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFD--Q 203
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ ++D I W++I AAY ++GH E + +F+ M + + N T +++L HV G
Sbjct: 204 MSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWG 263
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ ++K +V ++ + AGR +A + + MP K + W +L+ + V+
Sbjct: 264 RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMASFVN 322
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 109/246 (44%), Gaps = 4/246 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYA + +F + K WN++++ F+++ + +A+ L M+ + T
Sbjct: 288 MYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVT 347
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S L A ++ +H ++ SG Y + + LV +Y K G + + + +P
Sbjct: 348 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 407
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVG-LVDE 179
+D++ W+A+I Y + + A++ F M GV N +T SVL AC G L++
Sbjct: 408 --RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLER 465
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
G L +++ +I + + G L + +L + + N W A+L A
Sbjct: 466 GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANA 524
Query: 240 SHENVE 245
H + E
Sbjct: 525 HHGHGE 530
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/226 (19%), Positives = 107/226 (47%), Gaps = 4/226 (1%)
Query: 21 KRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADL-KQAMN 79
+ WN ++SG + L E ++ F++M ++P + SL+ A + ++ +
Sbjct: 4 RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 63
Query: 80 IHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKH 139
+H ++ +SG L + V++ ++ +Y G + + +F +P D++++ W++++ Y
Sbjct: 64 VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP--DRNVVSWTSLMVGYSDK 121
Query: 140 GHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHY 199
G E + ++ M GV N+ + + V+ +C + G + ++K + +
Sbjct: 122 GEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE 181
Query: 200 TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 245
+I +LG G +D A + M + + W ++ A + ++E
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMSERDTIS-WNSIAAAYAQNGHIE 226
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 103/297 (34%), Positives = 170/297 (57%), Gaps = 4/297 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA- 59
Y KC+ + + F + + W+A++SG+ S EA++ FK + ++ N+
Sbjct: 329 FYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSF 388
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T+ S+ A ++LAD +H I+ + S L+ +YSKCG L A+ +F
Sbjct: 389 TYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFE-- 446
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+ + DI+ W+A I+ + +G+ A+ LF +MV G+KPN VTF +VL ACSH GLV++
Sbjct: 447 SMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQ 506
Query: 180 GLSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G ML K+++ P +DHY C+ID+ R+G LD+A ++ MP +P+ W L C
Sbjct: 507 GKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGC 566
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRK 295
+H+N+ELGE+A +L+PE+T Y+L NLY G+W + ++ ++NE L+K
Sbjct: 567 WTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKK 623
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 110/238 (46%), Gaps = 4/238 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + ++F + + K+ ++ G+ AR+A++LF ++ E V+ D+
Sbjct: 228 MYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFV 287
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F+ +L A A L +L IH + + G + V + LVD Y KC S A F I
Sbjct: 288 FSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEI- 346
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKP-NQVTFTSVLHACSHVGLVDE 179
++ + + WSAII+ Y + E AV F + N T+TS+ ACS + +
Sbjct: 347 -REPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNI 405
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
G + +K +I + +I + + G LDDA + +M P+ W A +
Sbjct: 406 GGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISG 462
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 111/239 (46%), Gaps = 4/239 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY +C + K+F + S+ ++S + + +A+ LF ML +P ++
Sbjct: 127 MYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSM 186
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ +LL + L IH ++IR+G + + +V++Y KCG L A +F+ +
Sbjct: 187 YTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMA 246
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+K + + ++ Y + G A+ LF ++V GV+ + F+ VL AC+ + ++ G
Sbjct: 247 VKKP--VACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLG 304
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL-GAC 238
+ + K + V T ++D + + A + + +PN W A++ G C
Sbjct: 305 KQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR-EPNDVSWSAIISGYC 362
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/305 (36%), Positives = 176/305 (57%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + S +F + WNA+L+ H+ E ++L +M V D +
Sbjct: 508 MYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFS 567
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F+ L A A LA L++ +H ++ GF + + + D+YSKCG +G + + P
Sbjct: 568 FSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEV--VKMLPP 625
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++ + W+ +I+A G+HG+ E + F+EM++ G+KP VTF S+L ACSH GLVD+G
Sbjct: 626 SVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKG 685
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
L+ + + + + P ++H C+IDLLGR+GRL +A I MP+KPN VW +LL +C
Sbjct: 686 LAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCK 745
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
H N++ G AA +LEPE+ Y+L +N++A GRW DVE VR + ++K A
Sbjct: 746 IHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQAC 805
Query: 300 SLVEV 304
S V++
Sbjct: 806 SWVKL 810
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 133/274 (48%), Gaps = 17/274 (6%)
Query: 8 GNLSYK--MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLL 65
GN+ Y +F + S++ T WN++ + + N E+ ++F M + ++ T ++LL
Sbjct: 209 GNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLL 268
Query: 66 PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKD 125
+ K IH +++ GF + V + L+ +Y+ G A+ +F +P KD
Sbjct: 269 SVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKD-- 326
Query: 126 IIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHAC-----SHVGLVDEG 180
+I W++++A++ G A+ L M+ SG N VTFTS L AC G + G
Sbjct: 327 LISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHG 386
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
L + + + II ++ + G+ G + ++ ++ MP + + W AL+G
Sbjct: 387 LVVVSGLFYNQIIG-----NALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGGYAE 440
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAA 274
E+ + +AA T +E ++ NYI + ++ +A
Sbjct: 441 DEDPDKA-LAAFQTMRVEGVSS-NYITVVSVLSA 472
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 116/240 (48%), Gaps = 6/240 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y +C S K+F + + W +++ G+ E I ++K M E V + +
Sbjct: 106 VYGLVSC---SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENS 162
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ ++ + +L D I +++SG +L V + L+ + G++ YA++IF+
Sbjct: 163 MSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFD--Q 220
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ ++D I W++I AAY ++GH E + +F+ M + + N T +++L HV G
Sbjct: 221 MSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWG 280
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ ++K +V ++ + AGR +A + + MP K + W +L+ + V+
Sbjct: 281 RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMASFVN 339
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 109/246 (44%), Gaps = 4/246 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYA + +F + K WN++++ F+++ + +A+ L M+ + T
Sbjct: 305 MYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVT 364
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S L A ++ +H ++ SG Y + + LV +Y K G + + + +P
Sbjct: 365 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 424
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVG-LVDE 179
+D++ W+A+I Y + + A++ F M GV N +T SVL AC G L++
Sbjct: 425 --RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLER 482
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
G L +++ +I + + G L + +L + + N W A+L A
Sbjct: 483 GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANA 541
Query: 240 SHENVE 245
H + E
Sbjct: 542 HHGHGE 547
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 113/246 (45%), Gaps = 4/246 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY K + +F + WN ++SG + L E ++ F++M ++P +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 61 FNSLLPAYAILADL-KQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
SL+ A + ++ + +H ++ +SG L + V++ ++ +Y G + + +F +
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
P D++++ W++++ Y G E + ++ M GV N+ + + V+ +C +
Sbjct: 121 P--DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL 178
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
G + ++K + + +I +LG G +D A + M + + W ++ A
Sbjct: 179 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTIS-WNSIAAAYA 237
Query: 240 SHENVE 245
+ ++E
Sbjct: 238 QNGHIE 243
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 113/295 (38%), Positives = 182/295 (61%), Gaps = 10/295 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + +F K WN++L+G++H+ L EA+ +F+ M+ ++PD
Sbjct: 239 MYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVA 298
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+S+L A + K +H ++IR G + L VA+ L+ +YSK G LG A IF+
Sbjct: 299 ISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFD--Q 353
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ ++D + W+AII+A+ K+ +G + F +M ++ KP+ +TF SVL C++ G+V++G
Sbjct: 354 MLERDTVSWNAIISAHSKNSNG---LKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDG 410
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLI-RTMPIKPNHAVWGALLGAC 238
LF M K + I P ++HY C+++L GRAG +++AY++I + M ++ VWGALL AC
Sbjct: 411 ERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYAC 470
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGL 293
H N ++GEVAA+ FELEP+N N+ LL +Y+ R DVE+VR M+ + GL
Sbjct: 471 YLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGL 525
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 133/245 (54%), Gaps = 8/245 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAP--WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
+YA C +++++F + SK+ ++P WN+++SG+ +A+ L+ QM + V+PD
Sbjct: 136 LYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDR 195
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
TF +L A + ++ IH L++ GF Y + V + LV +Y+KCG + A ++F++
Sbjct: 196 FTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDM 255
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
IP KD + W++++ Y HG A+ +F MVQ+G++P++V +SVL + V
Sbjct: 256 IP--HKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFK 310
Query: 179 EGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G L ++++ + + +I L + G+L A + M ++ + W A++ A
Sbjct: 311 HGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQM-LERDTVSWNAIISAH 369
Query: 239 VSHEN 243
+ N
Sbjct: 370 SKNSN 374
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 9/185 (4%)
Query: 61 FNSLLPAYAILADLKQAMNIH----CYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 116
F SLL L + + +H YL+R+ L ++S LV +Y+ CG AH +F
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNN----LGISSKLVRLYASCGYAEVAHEVF 150
Query: 117 NIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGL 176
+ + +D W+++I+ Y + G E A++L+ +M + GVKP++ TF VL AC +G
Sbjct: 151 DRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGS 210
Query: 177 VDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG 236
V G ++ + ++K V ++ + + G + A N+ +P K ++ W ++L
Sbjct: 211 VQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHK-DYVSWNSMLT 269
Query: 237 ACVSH 241
+ H
Sbjct: 270 GYLHH 274
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 113/303 (37%), Positives = 173/303 (57%), Gaps = 6/303 (1%)
Query: 6 NCGNLS--YKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNS 63
+CG L +F K WN V++G++ N A+ +F+QM++ +Q +
Sbjct: 543 HCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMP 602
Query: 64 LLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD 123
+ A ++L L+ H Y ++ +A L+D+Y+K GS+ + +FN LK+
Sbjct: 603 VFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFN--GLKE 660
Query: 124 KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLS- 182
K W+A+I YG HG + A+ LF EM ++G P+ +TF VL AC+H GL+ EGL
Sbjct: 661 KSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRY 720
Query: 183 LFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLI-RTMPIKPNHAVWGALLGACVSH 241
L Q + P + HY C+ID+LGRAG+LD A ++ M + + +W +LL +C H
Sbjct: 721 LDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIH 780
Query: 242 ENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSL 301
+N+E+GE A FELEPE NY+LL+NLYA +G+W DV KVR +NE+ LRK S
Sbjct: 781 QNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSW 840
Query: 302 VEV 304
+E+
Sbjct: 841 IEL 843
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 4/227 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLV--EDVQPDN 58
MY+KC C + +F + K WN ++ GF + +QML EDV+ D
Sbjct: 336 MYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADE 395
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
T + +P + L +HCY ++ F+Y VA+ V Y+KCGSL YA +F+
Sbjct: 396 VTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHG 455
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
I + K + W+A+I + + +++ +M SG+ P+ T S+L ACS + +
Sbjct: 456 I--RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLR 513
Query: 179 EGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK 225
G + F++++ + + Y ++ L G L L M K
Sbjct: 514 LGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 560
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 114/236 (48%), Gaps = 7/236 (2%)
Query: 2 YAKCNCGNLSY--KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
YAKC G+LSY ++F K WNA++ G ++ R ++ QM + + PD+
Sbjct: 440 YAKC--GSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSF 497
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T SLL A + L L+ +H ++IR+ L V ++ +Y CG L +F+
Sbjct: 498 TVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFD-- 555
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
++DK ++ W+ +I Y ++G + A+ +F +MV G++ ++ V ACS + +
Sbjct: 556 AMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRL 615
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
G + LKH + +ID+ + G + + + + K A W A++
Sbjct: 616 GREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKST-ASWNAMI 670
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 117/242 (48%), Gaps = 8/242 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQML-VEDVQPDNA 59
MYA C + S +F K WNAV+S + N L E ++ F +M+ D+ PD+
Sbjct: 129 MYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHF 188
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T+ ++ A A ++D+ + +H ++++G + + V + LV Y G + A +F+I+
Sbjct: 189 TYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIM 248
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS----GVKPNQVTFTSVLHACSHVG 175
P +++++ W+++I + +G E + L EM++ P+ T +VL C+
Sbjct: 249 P--ERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARER 306
Query: 176 LVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ G + + +K + + ++D+ + G + +A +I M N W ++
Sbjct: 307 EIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTMV 365
Query: 236 GA 237
G
Sbjct: 366 GG 367
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 101/231 (43%), Gaps = 9/231 (3%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED----VQPDNATFNSLLPAY 68
++F ++ WN+++ F N + E+ L +M+ E+ PD AT ++LP
Sbjct: 243 QLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC 302
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIII 128
A ++ +H + ++ L + + L+D+YSKCG + A IF + +K+++
Sbjct: 303 AREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN--NNKNVVS 360
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSG--VKPNQVTFTSVLHACSHVGLVDEGLSLFQF 186
W+ ++ + G + +M+ G VK ++VT + + C H + L +
Sbjct: 361 WNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCY 420
Query: 187 MLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
LK + + + G L A + + K ++ W AL+G
Sbjct: 421 SLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNS-WNALIGG 470
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 24/183 (13%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAK S K+F +K TA WNA++ G+ + LA+EAI+LF++M PD+ T
Sbjct: 641 MYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLT 700
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVAS------------ILVDIYSKCGS 108
F +L A H LI G Y ++ S ++D+ + G
Sbjct: 701 FLGVLTACN-----------HSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQ 749
Query: 109 LGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSV 167
L A + ++ D+ IW +++++ H + EM + ++ + KP S
Sbjct: 750 LDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSN 809
Query: 168 LHA 170
L+A
Sbjct: 810 LYA 812
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 211 bits (538), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 177/305 (58%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY +C + + +F + + +NA+++G+ + EA+ LF++M + ++P+ T
Sbjct: 173 MYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEIT 232
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L + A+L L IH Y + F ++V + L+D+++KCGSL A IF
Sbjct: 233 LLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFE--K 290
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++ KD WSA+I AY HG E ++ +F M V+P+++TF +L+ACSH G V+EG
Sbjct: 291 MRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEG 350
Query: 181 LSLF-QFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F Q + K I+P + HY ++DLL RAG L+DAY I +PI P +W LL AC
Sbjct: 351 RKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACS 410
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
SH N++L E + FEL+ + G+Y++L+NLYA +W V+ +R ++ + K+P
Sbjct: 411 SHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGC 470
Query: 300 SLVEV 304
S +EV
Sbjct: 471 SSIEV 475
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 139/282 (49%), Gaps = 5/282 (1%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F S+ +N++ G+ + E LF ++L + + PDN TF SLL A A+
Sbjct: 85 LFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKA 144
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
L++ +HC ++ G + V L+++Y++C + A +F+ I + ++ ++A+I
Sbjct: 145 LEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIV--EPCVVCYNAMI 202
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII 193
Y + A+SLF EM +KPN++T SVL +C+ +G +D G + ++ KH
Sbjct: 203 TGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFC 262
Query: 194 PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVA-AR 252
V T +ID+ + G LDDA ++ M K A W A++ A +H E + R
Sbjct: 263 KYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQA-WSAMIVAYANHGKAEKSMLMFER 321
Query: 253 WTFELEPENTGNYILLANLYAAVGRWRDVEK-VRDMVNEVGL 293
E + ++ L N + GR + K MV++ G+
Sbjct: 322 MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGI 363
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 211 bits (538), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 108/305 (35%), Positives = 183/305 (60%), Gaps = 8/305 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + ++F SKK + W+A+L G+ N +AI++F++M +D+
Sbjct: 309 MYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLY----C 364
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F ++L A A LA ++ IH +R G + V S L+D+Y K G + A +++ +
Sbjct: 365 FGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMS 424
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+++ +I W+A+++A ++G GE AVS FN+MV+ G+KP+ ++F ++L AC H G+VDEG
Sbjct: 425 IRN--MITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEG 482
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+ F M K + I P +HY+C+IDLLGRAG ++A NL+ + + ++WG LLG C
Sbjct: 483 RNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCA 542
Query: 240 SHENV-ELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
++ + + E A+ ELEP+ +Y+LL+N+Y A+GR D +R ++ G+ K
Sbjct: 543 ANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVG 602
Query: 299 QSLVE 303
QS ++
Sbjct: 603 QSWID 607
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 110/213 (51%), Gaps = 8/213 (3%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQM-LVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYL 84
W AVLS F N L EA+ LF M + + PD +TF ++L A L LKQ IH L
Sbjct: 232 WTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKL 291
Query: 85 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEM 144
I +G + V S L+D+Y KCGS+ A +FN + K+ + WSA++ Y ++G E
Sbjct: 292 ITNGIGSNVVVESSLLDMYGKCGSVREARQVFN--GMSKKNSVSWSALLGGYCQNGEHEK 349
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIID 204
A+ +F EM + + F +VL AC+ + V G + ++ V + +ID
Sbjct: 350 AIEIFREMEE----KDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALID 405
Query: 205 LLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
L G++G +D A + M I+ N W A+L A
Sbjct: 406 LYGKSGCIDSASRVYSKMSIR-NMITWNAMLSA 437
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 111/218 (50%), Gaps = 4/218 (1%)
Query: 21 KRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNI 80
K W +++SG++ +A+++F +M+ + + T +S + A + L +++
Sbjct: 126 KDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCF 185
Query: 81 HCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHG 140
H +I GF + ++S L +Y A +F+ +P + D+I W+A+++A+ K+
Sbjct: 186 HGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMP--EPDVICWTAVLSAFSKND 243
Query: 141 HGEMAVSLFNEMVQS-GVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHY 199
E A+ LF M + G+ P+ TF +VL AC ++ + +G + ++ + I V
Sbjct: 244 LYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVE 303
Query: 200 TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+ ++D+ G+ G + +A + M K N W ALLG
Sbjct: 304 SSLLDMYGKCGSVREARQVFNGMS-KKNSVSWSALLGG 340
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 50 LVEDVQPDNATFNSLLPAYAIL-ADLKQAMN----------IHCYLIRSGFLYRLEVASI 98
L E ++ N+T +S +PA L A L Q N H ++++SG V +
Sbjct: 42 LTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNS 101
Query: 99 LVDIYSKCG-SLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGV 157
L+ +Y K G + +F+ +KD I W+++++ Y A+ +F EMV G+
Sbjct: 102 LLSLYFKLGPGMRETRRVFDGRFVKDA--ISWTSMMSGYVTGKEHVKALEVFVEMVSFGL 159
Query: 158 KPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH-----HIIPLVDHYTCIIDLLGRAGRL 212
N+ T +S + ACS +G V G ++ H H I Y L G
Sbjct: 160 DANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAY-----LYGVNREP 214
Query: 213 DDAYNLIRTMPIKPNHAVWGALLGA 237
DA + MP +P+ W A+L A
Sbjct: 215 VDARRVFDEMP-EPDVICWTAVLSA 238
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 210 bits (535), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 166/279 (59%), Gaps = 4/279 (1%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYL- 84
W+A++ G+ N EA ++F +M ++V+PD L+ A + + + + YL
Sbjct: 272 WSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLH 331
Query: 85 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEM 144
R V L+D+ +KCG + A +F +P +D++ + +++ HG G
Sbjct: 332 QRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMP--QRDLVSYCSMMEGMAIHGCGSE 389
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH-IIPLVDHYTCII 203
A+ LF +MV G+ P++V FT +L C LV+EGL F+ M K + I+ DHY+CI+
Sbjct: 390 AIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIV 449
Query: 204 DLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTG 263
+LL R G+L +AY LI++MP + + + WG+LLG C H N E+ EV AR FELEP++ G
Sbjct: 450 NLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAG 509
Query: 264 NYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLV 302
+Y+LL+N+YAA+ RW DV +RD +NE G+ K+ +S +
Sbjct: 510 SYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 104/231 (45%), Gaps = 27/231 (11%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN--A 59
Y KC + K+F + ++ W A++ ++ + EA +F D+ P+
Sbjct: 155 YGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMF------DLMPERNLG 208
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
++N+L+ DL A + + + + + ++D Y+K G + A +F
Sbjct: 209 SWNALVDGLVKSGDLVNAKKLFDEMPKRDII----SYTSMIDGYAKGGDMVSARDLFE-- 262
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD- 178
+ D+ WSA+I Y ++G A +F+EM VKP++ ++ ACS +G +
Sbjct: 263 EARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFEL 322
Query: 179 -EGLS--LFQFMLK---HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP 223
E + L Q M K H+++P +ID+ + G +D A L MP
Sbjct: 323 CEKVDSYLHQRMNKFSSHYVVP------ALIDMNAKCGHMDRAAKLFEEMP 367
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 105/226 (46%), Gaps = 18/226 (7%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDV-QPDNATFNSLLPAYAILA 72
+F + T WN ++ G+ + L E + + +M+ + +PD TF ++ +
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
++ ++H ++R GF + V + VD Y KC L A +F +P +++ + W+A+
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMP--ERNAVSWTAL 182
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
+ AY K G E A S+F+ M + N ++ +++ G + LF M K I
Sbjct: 183 VVAYVKSGELEEAKSMFDLMPER----NLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDI 238
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLI---RTMPIKPNHAVWGALL 235
I YT +ID + G + A +L R + ++ W AL+
Sbjct: 239 IS----YTSMIDGYAKGGDMVSARDLFEEARGVDVR----AWSALI 276
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 210 bits (535), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 111/307 (36%), Positives = 176/307 (57%), Gaps = 7/307 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY K + +F ++ WN+VL + + LF++ML ++PD T
Sbjct: 306 MYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVT 365
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLE----VASILVDIYSKCGSLGYAHHIF 116
++LP LA L+Q IH Y+I SG L R + + L+D+Y KCG L A +F
Sbjct: 366 LTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVF 425
Query: 117 NIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGL 176
+ + +KD W+ +I YG GE+A+ +F+ M ++GVKP+++TF +L ACSH G
Sbjct: 426 DSMRVKDS--ASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGF 483
Query: 177 VDEGLS-LFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
++EG + L Q ++I+P DHY C+ID+LGRA +L++AY L + PI N VW ++L
Sbjct: 484 LNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSIL 543
Query: 236 GACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRK 295
+C H N +L VA + ELEPE+ G Y+L++N+Y G++ +V VRD + + ++K
Sbjct: 544 SSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKK 603
Query: 296 LPAQSLV 302
P S +
Sbjct: 604 TPGCSWI 610
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 121/235 (51%), Gaps = 4/235 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + +F S++ +NA++SGF+ N +A++ +++M + PD T
Sbjct: 105 MYAKCGLMRRAVLVF-GGSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYT 163
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F SLL + +L +H + GF V S LV YSK S+ A +F+ +P
Sbjct: 164 FPSLLKGSDAM-ELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELP 222
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+D D ++W+A++ Y + E A+ +F++M + GV ++ T TSVL A + G +D G
Sbjct: 223 DRD-DSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNG 281
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
S+ +K + +ID+ G++ L++A ++ M + + W ++L
Sbjct: 282 RSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDER-DLFTWNSVL 335
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 110/214 (51%), Gaps = 7/214 (3%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
WNA+++G+ +A+ +F +M E V T S+L A+ + D+ +IH +
Sbjct: 230 WNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAV 289
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
++G + V++ L+D+Y K L A+ IF + ++D+ W++++ + G +
Sbjct: 290 KTGSGSDIVVSNALIDMYGKSKWLEEANSIFE--AMDERDLFTWNSVLCVHDYCGDHDGT 347
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDH----YTC 201
++LF M+ SG++P+ VT T+VL C + + +G + +M+ ++ +
Sbjct: 348 LALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNS 407
Query: 202 IIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
++D+ + G L DA + +M +K + A W ++
Sbjct: 408 LMDMYVKCGDLRDARMVFDSMRVK-DSASWNIMI 440
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 19/185 (10%)
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASI-LVDIYSKCGSLGYAHHIFN 117
AT + L A D IH +++R GFL A LV++Y+KCG + A +F
Sbjct: 61 ATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFG 120
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLV 177
++D+ ++A+I+ + +G A+ + EM +G+ P++ TF S+L + L
Sbjct: 121 ---GSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELS 177
Query: 178 D----EGLSLFQFMLKHHII---PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAV 230
D GL+ F+ LV Y+ + ++DA + +P + + +
Sbjct: 178 DVKKVHGLA-FKLGFDSDCYVGSGLVTSYSKFMS-------VEDAQKVFDELPDRDDSVL 229
Query: 231 WGALL 235
W AL+
Sbjct: 230 WNALV 234
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 175/304 (57%), Gaps = 4/304 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
YA C S K+F + ++ A W A+LSG+ N +A+ +F ML + P+ +T
Sbjct: 269 FYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQST 328
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S L + + L L +H ++ G V + LV +YS G++ A +F I
Sbjct: 329 FASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVF--IK 386
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ K I+ W++II +HG G+ A +F +M++ +P+++TFT +L ACSH G +++G
Sbjct: 387 IFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKG 446
Query: 181 LSLFQFMLK--HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
LF +M +HI + HYTC++D+LGR G+L +A LI M +KPN VW ALL AC
Sbjct: 447 RKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSAC 506
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H +V+ GE AA F L+ +++ Y+LL+N+YA+ GRW +V K+R + + G+ K P
Sbjct: 507 RMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPG 566
Query: 299 QSLV 302
S V
Sbjct: 567 SSWV 570
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 114/229 (49%), Gaps = 3/229 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F + K W ++ G N + EA+ LFK ML ++ + F ++ A A
Sbjct: 180 KLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAP 239
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
+ +H +I+ GFLY V++ L+ Y+ C +G + +F+ + + +W+A+
Sbjct: 240 AFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFD--EKVHEQVAVWTAL 297
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
++ Y + E A+S+F+ M+++ + PNQ TF S L++CS +G +D G + +K +
Sbjct: 298 LSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGL 357
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
++ + +G ++DA ++ + K + W +++ C H
Sbjct: 358 ETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQH 405
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 99 LVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVK 158
++ Y++ L A ++F+ +P++D ++ W+++I+ + G AV LF+EM + V
Sbjct: 72 MITGYTRSNRLVDALNLFDEMPVRD--VVSWNSMISGCVECGDMNTAVKLFDEMPERSV- 128
Query: 159 PNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDH--YTCIIDLLGRAGRLDDAY 216
V++T++++ C G VD+ LF M P+ D + ++ + G++DDA
Sbjct: 129 ---VSWTAMVNGCFRSGKVDQAERLFYQM------PVKDTAAWNSMVHGYLQFGKVDDAL 179
Query: 217 NLIRTMPIKPNHAVWGALLGACVSHENVELGE 248
L + MP K N W ++ C +N GE
Sbjct: 180 KLFKQMPGK-NVISWTTMI--CGLDQNERSGE 208
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 209 bits (531), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 175/293 (59%), Gaps = 5/293 (1%)
Query: 15 FMKTSKKRTA-PWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNATFNSLLPAYAILA 72
F++ RT W ++ G+ +EAI LF +M+ D ++P+ T ++LPA L
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 73 DLKQAMNIHCYLIRSGFL-YRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
DLK ++H Y+ + GF+ + V + L+D Y+KCG + A F IP K+++ W+
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG-LSLFQFML-K 189
+I+A+ HG G+ AVS+F +M + G+KPN+VT SVL+ACSH GL +E L F M+ +
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNE 390
Query: 190 HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEV 249
+ I P V HY C++D+L R GRL++A + +PI+ VW LLGAC +++ EL E
Sbjct: 391 YKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAER 450
Query: 250 AARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLV 302
R ELE + G+Y+L++N++ GR+ D ++ R ++ G+ KLP S V
Sbjct: 451 VTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 76/157 (48%), Gaps = 5/157 (3%)
Query: 2 YAKCNCGNLSYKMFMK--TSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
YAKC C ++K F++ +K W ++S F + + +EA+ +FK M ++P+
Sbjct: 302 YAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRV 361
Query: 60 TFNSLLPA--YAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
T S+L A + LA+ + + + ++ LVD+ + G L A I
Sbjct: 362 TMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIAL 421
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ 154
IP+++K ++W ++ A + E+A + ++++
Sbjct: 422 EIPIEEK-AVVWRMLLGACSVYDDAELAERVTRKLME 457
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 209 bits (531), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 180/299 (60%), Gaps = 9/299 (3%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F + + W+ +++G++ L E +++F++MLV+ ++PD + + L A A +
Sbjct: 173 KVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVG 232
Query: 73 DLKQAMNIHCYLIRSGFLYR-LEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
L Q IH ++ + ++ + V + LVD+Y+KCG + A +F L +++ W+A
Sbjct: 233 ALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFK--KLTRRNVFSWAA 290
Query: 132 IIAAYGKHGHGEMAVSLFNEMV-QSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM-LK 189
+I Y +G+ + A++ + + G+KP+ V VL AC+H G ++EG S+ + M +
Sbjct: 291 LIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEAR 350
Query: 190 HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEV 249
+ I P +HY+CI+DL+ RAGRLDDA NLI MP+KP +VWGALL C +H+NVELGE+
Sbjct: 351 YEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGEL 410
Query: 250 AARWTFELEP----ENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
A + +LE E + L+N+Y +V R + KVR M+ + G+RK P S++EV
Sbjct: 411 AVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEV 469
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 97/189 (51%), Gaps = 7/189 (3%)
Query: 52 EDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSG-FLYRLEVASILVDIYSKCGSLG 110
ED+ P TF+ L+ A IHC+++++G FL V + ++ IY + L
Sbjct: 110 EDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLL 169
Query: 111 YAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHA 170
A +F+ IP D++ W ++ Y + G G + +F EM+ G++P++ + T+ L A
Sbjct: 170 DARKVFDEIP--QPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTA 227
Query: 171 CSHVGLVDEGLSLFQFMLKHHIIPLVDHY--TCIIDLLGRAGRLDDAYNLIRTMPIKPNH 228
C+ VG + +G + +F+ K I D + T ++D+ + G ++ A + + + + N
Sbjct: 228 CAQVGALAQGKWIHEFVKKKSWIE-SDVFVGTALVDMYAKCGCIETAVEVFKKLT-RRNV 285
Query: 229 AVWGALLGA 237
W AL+G
Sbjct: 286 FSWAALIGG 294
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 81/172 (47%), Gaps = 6/172 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNA 59
MYAKC C + ++F K +++ W A++ G+ A++A+ +++ ED ++PD+
Sbjct: 263 MYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSV 322
Query: 60 TFNSLLPAYAILADLKQAMN-IHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
+L A A L++ + + R + E S +VD+ + G L A ++
Sbjct: 323 VLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEK 382
Query: 119 IPLKDKDIIIWSAIIAAYGKHGH---GEMAVSLFNEMVQSGVKPNQVTFTSV 167
+P+K +W A++ H + GE+AV ++ + V+ + +
Sbjct: 383 MPMKPL-ASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQL 433
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 209 bits (531), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 176/306 (57%), Gaps = 5/306 (1%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQP-DNAT 60
YAK + ++F K W A++SGF+ + EA +F +M E V D
Sbjct: 181 YAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLV 240
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+S++ A A LA +H +I GF + +++ L+D+Y+KC + A IF+
Sbjct: 241 LSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFS--R 298
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++ +D++ W+++I +HG E A++L+++MV GVKPN+VTF +++ACSHVG V++G
Sbjct: 299 MRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKG 358
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
LFQ M K + I P + HYTC++DLLGR+G LD+A NLI TMP P+ W ALL AC
Sbjct: 359 RELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACK 418
Query: 240 SHENVELG-EVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
++G +A + ++ YILL+N+YA+ W V + R + E+ +RK P
Sbjct: 419 RQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPG 478
Query: 299 QSLVEV 304
S VEV
Sbjct: 479 HSSVEV 484
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 7/193 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNA 59
+Y KC + + ++F + + W +VL+ +L+ + + +F + ++PD+
Sbjct: 47 VYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDF 106
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F++L+ A A L + +HC+ I S + V S LVD+Y+KCG L A +F+ I
Sbjct: 107 VFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSI 166
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+ K+ I W+A+++ Y K G E A+ LF + VK N ++T+++ G E
Sbjct: 167 RV--KNTISWTAMVSGYAKSGRKEEALELFRIL---PVK-NLYSWTALISGFVQSGKGLE 220
Query: 180 GLSLFQFMLKHHI 192
S+F M + +
Sbjct: 221 AFSVFTEMRRERV 233
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 78/156 (50%), Gaps = 2/156 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC+ + +F + + W +++ G + A +A+ L+ M+ V+P+ T
Sbjct: 282 MYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVT 341
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F L+ A + + +++ + + + G L+ + L+D+ + G L A ++ + +
Sbjct: 342 FVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTM 401
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS 155
P D W+A+++A + G G+M + + + +V S
Sbjct: 402 PFP-PDEPTWAALLSACKRQGRGQMGIRIADHLVSS 436
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 93/198 (46%), Gaps = 35/198 (17%)
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
L A +H ++++ G + +A+ LV++Y KCG+ +A +F+ +P +D I W++++
Sbjct: 19 LTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH--IAWASVL 76
Query: 134 AAYGKHG-HGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLF-QFMLKHH 191
A + G+ + SG++P+ F++++ AC+++G +D G + F++ +
Sbjct: 77 TALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEY 136
Query: 192 I------IPLVDHY------------------------TCIIDLLGRAGRLDDAYNLIRT 221
LVD Y T ++ ++GR ++A L R
Sbjct: 137 ANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRI 196
Query: 222 MPIKPNHAVWGALLGACV 239
+P+K N W AL+ V
Sbjct: 197 LPVK-NLYSWTALISGFV 213
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 209 bits (531), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 184/338 (54%), Gaps = 38/338 (11%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRT-APWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
MY+KC C +Y +F + R WN+V+SG + N A++LF+++ E ++PD+A
Sbjct: 275 MYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSA 334
Query: 60 TFNSLLPAYAILAD-----------------------------------LKQAMNIHCYL 84
T+NSL+ ++ L LK IH ++
Sbjct: 335 TWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHV 394
Query: 85 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEM 144
I++ + V + L+D+Y KCG +A IF+ K KD + W+ +I+ YGKHG E
Sbjct: 395 IKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECES 454
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH-IIPLVDHYTCII 203
A+ +F + + V+P+ TFT+VL ACSH G V++G +F+ M + + P +H C+I
Sbjct: 455 AIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMI 514
Query: 204 DLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTG 263
DLLGR+GRL +A +I M + +LLG+C H + LGE AA ELEPEN
Sbjct: 515 DLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPA 573
Query: 264 NYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSL 301
+++L+++YAA+ RW DVE +R ++++ L KLP SL
Sbjct: 574 PFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSL 611
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 107/208 (51%), Gaps = 7/208 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQML-VEDVQPDNA 59
MY++C L+ +MF K K +NA +SG + N + +F M +P++
Sbjct: 173 MYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDV 232
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
TF + + A A L +L+ +H +++ F + V + L+D+YSKC A+ +F
Sbjct: 233 TFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFT-- 290
Query: 120 PLKD-KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
LKD +++I W+++I+ +G E AV LF ++ G+KP+ T+ S++ S +G V
Sbjct: 291 ELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVI 350
Query: 179 EGLSLFQFMLKHHIIPLVDHYTCIIDLL 206
E F+ ML ++P C+ LL
Sbjct: 351 EAFKFFERMLSVVMVP---SLKCLTSLL 375
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 10/253 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY K + K+ + ++ A NA +SG + N R+A ++F V ++ T
Sbjct: 75 MYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVT 134
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L D++ M +HC ++SGF + V + LV +YS+CG A +F +P
Sbjct: 135 VASVLGG---CGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVP 191
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSVLHACSHVGLVDE 179
K ++ ++A I+ ++G + S+FN M + S +PN VTF + + AC+ + +
Sbjct: 192 --HKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQY 249
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
G L ++K T +ID+ + AY + + N W +++ +
Sbjct: 250 GRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMM 309
Query: 240 ---SHEN-VELGE 248
HE VEL E
Sbjct: 310 INGQHETAVELFE 322
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 5/170 (2%)
Query: 56 PDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 115
P+ TF LL + A L D+ Q +H ++++GF + A+ LV +Y K + A +
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVG 175
+ +P ++ I +A ++ ++G A +F + SG N VT SVL C G
Sbjct: 89 LDEMP--ERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---G 143
Query: 176 LVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK 225
++ G+ L +K V T ++ + R G A + +P K
Sbjct: 144 DIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHK 193
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 209 bits (531), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 181/294 (61%), Gaps = 7/294 (2%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
+YK+F + + A WNA+++G + + A EA++L+K+M E ++ T + L A +
Sbjct: 163 AYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSH 222
Query: 71 LADLKQAMNI-HCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIW 129
L D+K+ NI H Y + + V++ +D+YSKCG + A+ +F K K ++ W
Sbjct: 223 LGDVKEGENIFHGYSNDN-----VIVSNAAIDMYSKCGFVDKAYQVFEQFTGK-KSVVTW 276
Query: 130 SAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK 189
+ +I + HG A+ +F+++ +G+KP+ V++ + L AC H GLV+ GLS+F M
Sbjct: 277 NTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMAC 336
Query: 190 HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEV 249
+ + HY C++DLL RAGRL +A+++I +M + P+ +W +LLGA + +VE+ E+
Sbjct: 337 KGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEI 396
Query: 250 AARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVE 303
A+R E+ N G+++LL+N+YAA GRW+DV +VRD + ++K+P S +E
Sbjct: 397 ASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIE 450
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 114/243 (46%), Gaps = 16/243 (6%)
Query: 8 GNLSY--KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED------VQPDNA 59
G+LS+ ++F K T WNA++ GF +S A ++ ML + + D
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 60 TFNSLLPAYAILADLKQAMN-IHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
T + L A A A AM+ +HC + R G + + L+D YSK G L A+ +F+
Sbjct: 111 TCSFTLKACA-RALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDE 169
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
+P+ +D+ W+A+IA A+ L+ M G++ ++VT + L ACSH+G V
Sbjct: 170 MPV--RDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVK 227
Query: 179 EGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
EG ++F ++I ID+ + G +D AY + K + W ++
Sbjct: 228 EGENIFHGYSNDNVIV----SNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGF 283
Query: 239 VSH 241
H
Sbjct: 284 AVH 286
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 83/164 (50%), Gaps = 8/164 (4%)
Query: 1 MYAKCNCGNLSYKMFMK-TSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
MY+KC + +Y++F + T KK WN +++GF + A A+++F ++ ++PD+
Sbjct: 250 MYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDV 309
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI---F 116
++ + L A ++ +++ + G ++ +VD+ S+ G L AH I
Sbjct: 310 SYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSM 369
Query: 117 NIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPN 160
++IP D ++W +++ A + EMA E+ + GV +
Sbjct: 370 SMIP----DPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNND 409
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 208 bits (530), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 107/309 (34%), Positives = 189/309 (61%), Gaps = 9/309 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY++C+ ++ +F + + WN+++SGF +N + E L K+ML+ P++ T
Sbjct: 366 MYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHIT 425
Query: 61 FNSLLPAYAILADLKQAMNIHCYLI-RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
S+LP +A + +L+ HCY++ R + L + + LVD+Y+K G + A +F+
Sbjct: 426 LASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFD-- 483
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
++ +D + ++++I YG+ G GE+A++ F +M +SG+KP+ VT +VL ACSH LV E
Sbjct: 484 SMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVRE 543
Query: 180 GLSLFQFMLKHHIIPL---VDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG 236
G LF M H+ + ++HY+C++DL RAG LD A ++ T+P +P+ A+ LL
Sbjct: 544 GHWLFTKM--EHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLK 601
Query: 237 ACVSHENVELGEVAA-RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRK 295
AC+ H N +GE AA + E +PE+ G+Y+LLA++YA G W + V+ +++++G++K
Sbjct: 602 ACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Query: 296 LPAQSLVEV 304
+L+E
Sbjct: 662 AHEFALMET 670
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 146/369 (39%), Gaps = 87/369 (23%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY + +++ ++F + S++ WNA+++ + EA +L +M + V+ T
Sbjct: 228 MYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVT 287
Query: 61 FNSL-----------------------------------LPAYAILADLKQAMNIHCYLI 85
+N++ L A + + LK HC +I
Sbjct: 288 WNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVI 347
Query: 86 RS-GFLYRLE-VASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGE 143
RS F + ++ V + L+ +YS+C L +A +F + + + W++II+ + + E
Sbjct: 348 RSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQV--EANSLSTWNSIISGFAYNERSE 405
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII--------PL 195
L EM+ SG PN +T S+L + VG + G ++L+ L
Sbjct: 406 ETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSL 465
Query: 196 VD------------------------HYTCIIDLLGRAGRLDDAYNLIRTMP---IKPNH 228
VD YT +ID GR G+ + A + M IKP+H
Sbjct: 466 VDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDH 525
Query: 229 AVWGALLGACVSHENVELGEVAARWTFELEPENTG------NYILLANLYAAVGRWRDVE 282
A+L AC SH N+ W F G +Y + +LY G ++
Sbjct: 526 VTMVAVLSAC-SHSNLVR---EGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGY---LD 578
Query: 283 KVRDMVNEV 291
K RD+ + +
Sbjct: 579 KARDIFHTI 587
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 76/151 (50%), Gaps = 2/151 (1%)
Query: 25 PWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYL 84
PWN ++ +I N +E++ ++K+M+ + ++ D T+ S++ A A L D +H +
Sbjct: 151 PWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSI 210
Query: 85 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEM 144
S L V + L+ +Y + G + A +F+ + ++D + W+AII Y
Sbjct: 211 EVSSHRCNLYVCNALISMYKRFGKVDVARRLFD--RMSERDAVSWNAIINCYTSEEKLGE 268
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVG 175
A L + M SGV+ + VT+ ++ C G
Sbjct: 269 AFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 208 bits (530), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 107/309 (34%), Positives = 189/309 (61%), Gaps = 9/309 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY++C+ ++ +F + + WN+++SGF +N + E L K+ML+ P++ T
Sbjct: 366 MYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHIT 425
Query: 61 FNSLLPAYAILADLKQAMNIHCYLI-RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
S+LP +A + +L+ HCY++ R + L + + LVD+Y+K G + A +F+
Sbjct: 426 LASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFD-- 483
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
++ +D + ++++I YG+ G GE+A++ F +M +SG+KP+ VT +VL ACSH LV E
Sbjct: 484 SMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVRE 543
Query: 180 GLSLFQFMLKHHIIPL---VDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG 236
G LF M H+ + ++HY+C++DL RAG LD A ++ T+P +P+ A+ LL
Sbjct: 544 GHWLFTKM--EHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLK 601
Query: 237 ACVSHENVELGEVAA-RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRK 295
AC+ H N +GE AA + E +PE+ G+Y+LLA++YA G W + V+ +++++G++K
Sbjct: 602 ACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Query: 296 LPAQSLVEV 304
+L+E
Sbjct: 662 AHEFALMET 670
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 146/369 (39%), Gaps = 87/369 (23%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY + +++ ++F + S++ WNA+++ + EA +L +M + V+ T
Sbjct: 228 MYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVT 287
Query: 61 FNSL-----------------------------------LPAYAILADLKQAMNIHCYLI 85
+N++ L A + + LK HC +I
Sbjct: 288 WNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVI 347
Query: 86 RS-GFLYRLE-VASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGE 143
RS F + ++ V + L+ +YS+C L +A +F + + + W++II+ + + E
Sbjct: 348 RSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQV--EANSLSTWNSIISGFAYNERSE 405
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII--------PL 195
L EM+ SG PN +T S+L + VG + G ++L+ L
Sbjct: 406 ETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSL 465
Query: 196 VD------------------------HYTCIIDLLGRAGRLDDAYNLIRTMP---IKPNH 228
VD YT +ID GR G+ + A + M IKP+H
Sbjct: 466 VDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDH 525
Query: 229 AVWGALLGACVSHENVELGEVAARWTFELEPENTG------NYILLANLYAAVGRWRDVE 282
A+L AC SH N+ W F G +Y + +LY G ++
Sbjct: 526 VTMVAVLSAC-SHSNLVR---EGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGY---LD 578
Query: 283 KVRDMVNEV 291
K RD+ + +
Sbjct: 579 KARDIFHTI 587
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 76/151 (50%), Gaps = 2/151 (1%)
Query: 25 PWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYL 84
PWN ++ +I N +E++ ++K+M+ + ++ D T+ S++ A A L D +H +
Sbjct: 151 PWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSI 210
Query: 85 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEM 144
S L V + L+ +Y + G + A +F+ + ++D + W+AII Y
Sbjct: 211 EVSSHRCNLYVCNALISMYKRFGKVDVARRLFD--RMSERDAVSWNAIINCYTSEEKLGE 268
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVG 175
A L + M SGV+ + VT+ ++ C G
Sbjct: 269 AFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 208 bits (530), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 105/279 (37%), Positives = 165/279 (59%), Gaps = 4/279 (1%)
Query: 24 APWNAVLSGFIHNSLAREAIQLFKQMLVEDVQ-PDNATFNSLLPAYAILADLKQAMNIHC 82
A WN+++SGF HN L +A+ LF++M V P+ +F ++L + + L L H
Sbjct: 484 ACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHG 543
Query: 83 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHG 142
+++SG++ V + L D+Y KCG + A F+ + K+ +IW+ +I YG +G G
Sbjct: 544 LVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVL--RKNTVIWNEMIHGYGHNGRG 601
Query: 143 EMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK-HHIIPLVDHYTC 201
+ AV L+ +M+ SG KP+ +TF SVL ACSH GLV+ GL + M + H I P +DHY C
Sbjct: 602 DEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYIC 661
Query: 202 IIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPEN 261
I+D LGRAGRL+DA L P K + +W LL +C H +V L A L+P++
Sbjct: 662 IVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQS 721
Query: 262 TGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
+ Y+LL+N Y+++ +W D ++ ++N+ + K P QS
Sbjct: 722 SAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQS 760
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 140/314 (44%), Gaps = 48/314 (15%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
++F + + WNA+LSG+ + EAI F+QM ++++PD T + +L + A L
Sbjct: 371 RIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLR 430
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
L+ IH +IR+ + S L+ +YS+C + + IF+ + + DI W+++
Sbjct: 431 FLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDC-INELDIACWNSM 489
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGV-KPNQVTFTSVLHACSHV----------------- 174
I+ + + A+ LF M Q+ V PN+ +F +VL +CS +
Sbjct: 490 ISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSG 549
Query: 175 ------------------GLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAY 216
G +D F +L+ + + + +I G GR D+A
Sbjct: 550 YVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVI----WNEMIHGYGHNGRGDEAV 605
Query: 217 NLIRTM---PIKPNHAVWGALLGACVSHENVELG-EV--AARWTFELEPENTGNYILLAN 270
L R M KP+ + ++L AC VE G E+ + + +EPE +YI + +
Sbjct: 606 GLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPE-LDHYICIVD 664
Query: 271 LYAAVGRWRDVEKV 284
GR D EK+
Sbjct: 665 CLGRAGRLEDAEKL 678
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 122/261 (46%), Gaps = 19/261 (7%)
Query: 1 MYAKCN-CGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
MYAKC + ++F S+ + AV+ G + EA+Q+F+ M + VQ D+
Sbjct: 182 MYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSV 241
Query: 60 TFNSLLPAYA------ILADL---KQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLG 110
+++L A L+++ + IHC +R GF L + + L++IY+K +
Sbjct: 242 CLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMN 301
Query: 111 YAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHA 170
A IF +P + +++ W+ +I +G+ + +V M SG +PN+VT SVL A
Sbjct: 302 GAELIFAEMP--EVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGA 359
Query: 171 CSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP---IKPN 227
C G V+ G +F + + P V + ++ ++A + R M +KP+
Sbjct: 360 CFRSGDVETGRRIFSSIPQ----PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPD 415
Query: 228 HAVWGALLGACVSHENVELGE 248
+L +C +E G+
Sbjct: 416 KTTLSVILSSCARLRFLEGGK 436
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 81/168 (48%), Gaps = 5/168 (2%)
Query: 4 KCNCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
+C G+L + ++F ++ WN ++S + +A+ ++K+M+ + P T
Sbjct: 82 RCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTL 141
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSL-GYAHHIFNIIP 120
S+L A + + D M H +++G + V + L+ +Y+KCG + Y +F
Sbjct: 142 ASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFE--S 199
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVL 168
L + + ++A+I + AV +F M + GV+ + V +++L
Sbjct: 200 LSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNIL 247
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y +C G+ + K+F + S + WNA L+ EA ++F M DV +
Sbjct: 50 LYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDV----VS 105
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFL-YRLEVASILVDIYSKC-----GSLGYAHH 114
+N+++ ++A+ ++ ++ GFL R +AS+L S C G G H
Sbjct: 106 WNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVL----SACSKVLDGVFGMRCH 161
Query: 115 IFNIIPLKDKDIIIWSAIIAAYGKHGH-GEMAVSLFNEMVQSGVKPNQVTFTSVLHACSH 173
+ DK+I + +A+++ Y K G + V +F + Q PN+V++T+V+ +
Sbjct: 162 GVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQ----PNEVSYTAVIGGLAR 217
Query: 174 VGLVDEGLSLFQFMLKHHI 192
V E + +F+ M + +
Sbjct: 218 ENKVLEAVQMFRLMCEKGV 236
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 208 bits (529), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 167/294 (56%), Gaps = 4/294 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
KM K ++ WN+++SG++ + +A LF +M+ + PD T+ ++L A LA
Sbjct: 558 KMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLA 617
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
IH +I+ + + S LVD+YSKCG L + +F L+ +D + W+A+
Sbjct: 618 SAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEK-SLR-RDFVTWNAM 675
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH- 191
I Y HG GE A+ LF M+ +KPN VTF S+L AC+H+GL+D+GL F M + +
Sbjct: 676 ICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYG 735
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHE-NVELGEVA 250
+ P + HY+ ++D+LG++G++ A LIR MP + + +W LLG C H NVE+ E A
Sbjct: 736 LDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEA 795
Query: 251 ARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
L+P+++ Y LL+N+YA G W V +R + L+K P S VE+
Sbjct: 796 TAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVEL 849
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 120/261 (45%), Gaps = 24/261 (9%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC ++++F + ++ WNA+++ N E + LF ML ++PD T
Sbjct: 426 MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 485
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN--- 117
F S+L A L M IH +++SG V L+D+YSKCG + A I +
Sbjct: 486 FGSILKA-CTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFF 544
Query: 118 -----------IIPLKDKDI----IIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQV 162
+ + +K + + W++II+ Y E A LF M++ G+ P++
Sbjct: 545 QRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKF 604
Query: 163 TFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTC--IIDLLGRAGRLDDAYNLIR 220
T+ +VL C+++ G + ++K + D Y C ++D+ + G L D+ L+
Sbjct: 605 TYATVLDTCANLASAGLGKQIHAQVIKKELQS--DVYICSTLVDMYSKCGDLHDS-RLMF 661
Query: 221 TMPIKPNHAVWGALLGACVSH 241
++ + W A++ H
Sbjct: 662 EKSLRRDFVTWNAMICGYAHH 682
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 115/215 (53%), Gaps = 3/215 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC+ + +F + +NA+++G+ +A+ LF +++ + D +
Sbjct: 325 MYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEIS 384
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ + A A++ L + + I+ I+S + VA+ +D+Y KC +L A +F+
Sbjct: 385 LSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFD--E 442
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++ +D + W+AIIAA+ ++G G + LF M++S ++P++ TF S+L AC+ G + G
Sbjct: 443 MRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYG 501
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDA 215
+ + ++K + +ID+ + G +++A
Sbjct: 502 MEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA 536
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 124/237 (52%), Gaps = 3/237 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAK S ++F +K + W+A+++G + N+L A++ FK+M + +
Sbjct: 224 MYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI 283
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ S+L + A L++L+ +H + ++S F V + +D+Y+KC ++ A +F+
Sbjct: 284 YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFD--N 341
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++ + ++A+I Y + HG A+ LF+ ++ SG+ ++++ + V AC+ V + EG
Sbjct: 342 SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEG 401
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
L ++ +K + V ID+ G+ L +A+ + M + + W A++ A
Sbjct: 402 LQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 2/214 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y+K N + F + WN++LSG++ N + ++I++F M E ++ D TF
Sbjct: 124 YSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTF 183
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+L + L D M IH ++R G + AS L+D+Y+K + +F IP
Sbjct: 184 AIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIP- 242
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
+K+ + WSAIIA ++ +A+ F EM + +Q + SVL +C+ + + G
Sbjct: 243 -EKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGG 301
Query: 182 SLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDA 215
L LK T +D+ + + DA
Sbjct: 302 QLHAHALKSDFAADGIVRTATLDMYAKCDNMQDA 335
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 76/140 (54%), Gaps = 2/140 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC + S MF K+ ++ WNA++ G+ H+ EAIQLF++M++E+++P++ T
Sbjct: 647 MYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVT 706
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F S+L A A + + + + + R G +L S +VDI K G + A + +
Sbjct: 707 FISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREM 766
Query: 120 PLKDKDIIIWSAIIAAYGKH 139
P + D +IW ++ H
Sbjct: 767 PFEADD-VIWRTLLGVCTIH 785
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 122/251 (48%), Gaps = 20/251 (7%)
Query: 33 FIHNSLARE-AIQLFKQ----MLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRS 87
F+ A++ A++L KQ M++ +P N LL Y D + ++
Sbjct: 53 FVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDF-----VSASMVFD 107
Query: 88 GFLYRLEVA-SILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAV 146
R V+ + +++ YSK + A+ FN++P+ +D++ W+++++ Y ++G ++
Sbjct: 108 KMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPV--RDVVSWNSMLSGYLQNGESLKSI 165
Query: 147 SLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLL 206
+F +M + G++ + TF +L CS + G+ + +++ V + ++D+
Sbjct: 166 EVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMY 225
Query: 207 GRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYI 266
+ R ++ + + +P K N W A++ CV + + L A ++ E++ N G
Sbjct: 226 AKGKRFVESLRVFQGIPEK-NSVSWSAIIAGCVQNNLLSL---ALKFFKEMQKVNAG--- 278
Query: 267 LLANLYAAVGR 277
+ ++YA+V R
Sbjct: 279 VSQSIYASVLR 289
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 207 bits (526), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 103/306 (33%), Positives = 180/306 (58%), Gaps = 5/306 (1%)
Query: 1 MYAKCNCGNLSY-KMFMKTSKKR-TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
M C CGN+S ++ +TSK R W++++SG+ E + L QM E ++ ++
Sbjct: 294 MTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANS 353
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
T +++ A L A +H +++ GF+ + + + L+D+Y+KCGSL A +F
Sbjct: 354 VTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVF-- 411
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
L +KD++ WS++I AYG HGHG A+ +F M++ G + + + F ++L AC+H GLV+
Sbjct: 412 YELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVE 471
Query: 179 EGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
E ++F K+H+ ++HY C I+LLGR G++DDA+ + MP+KP+ +W +LL AC
Sbjct: 472 EAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSAC 531
Query: 239 VSHENVEL-GEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
+H +++ G++ A + EP+N NY+LL+ ++ G + E+VR ++ L K
Sbjct: 532 ETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCY 591
Query: 298 AQSLVE 303
S +E
Sbjct: 592 GFSKIE 597
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 115/238 (48%), Gaps = 4/238 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY K + ++ +F + K W A++SG + N + LF+ M E+++P+ T
Sbjct: 194 MYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVT 253
Query: 61 FNSLLPAYAILA-DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
S+LPA L IH + R G + + + +Y +CG++ + +F
Sbjct: 254 LLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETS 313
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
K +D+++WS++I+ Y + G ++L N+M + G++ N VT +++ AC++ L+
Sbjct: 314 --KVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSF 371
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
++ +LK + + +ID+ + G L A + + K + W +++ A
Sbjct: 372 ASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEK-DLVSWSSMINA 428
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 86/173 (49%), Gaps = 4/173 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAK + K+F + + T + ++++ + L EA++L K+M P +
Sbjct: 91 MYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSEL 150
Query: 61 FNSLLPAYAIL-ADLKQAMNIHCY-LIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
SLL + + K A H L+ + +++ LVD+Y K A H+F+
Sbjct: 151 VASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQ 210
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHAC 171
+ +K++ + W+A+I+ + + EM V LF M + ++PN+VT SVL AC
Sbjct: 211 MEVKNE--VSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPAC 261
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 102/231 (44%), Gaps = 25/231 (10%)
Query: 30 LSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQ-----AMNIHCYL 84
L G + + EA++L+K + + + + F ++LP+ +Q +HC
Sbjct: 17 LKGLVSDQFYDEALRLYK-LKIHSLGTNG--FTAILPSVIKACAFQQEPFLLGAQLHCLC 73
Query: 85 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEM 144
+++G V++ L+ +Y+K +F+ + +D + + +II + + G
Sbjct: 74 LKAGADCDTVVSNSLISMYAKFSRKYAVRKVFD--EMLHRDTVSYCSIINSCCQDGLLYE 131
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHY----- 199
A+ L EM G P S+L C+ +G + +F H + LVD
Sbjct: 132 AMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMF------HALVLVDERMQESV 185
Query: 200 ---TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 247
T ++D+ + A+++ M +K N W A++ CV+++N E+G
Sbjct: 186 LLSTALVDMYLKFDDHAAAFHVFDQMEVK-NEVSWTAMISGCVANQNYEMG 235
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 173/304 (56%), Gaps = 3/304 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY +C+ + S ++F W +++SG + N A+ F++M+ + ++P++ T
Sbjct: 311 MYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFT 370
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+S L + LA ++ IH + + GF S L+D+Y KCG A +F+
Sbjct: 371 LSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFD--T 428
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
L + D+I + +I +Y ++G G A+ LF M+ G++PN VT SVL AC++ LV+EG
Sbjct: 429 LSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEG 488
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
LF K I+ DHY C++DLLGRAGRL++A ++ T I P+ +W LL AC
Sbjct: 489 CELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKV 547
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H VE+ E R E+EP + G IL++NLYA+ G+W V +++ + ++ L+K PA S
Sbjct: 548 HRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMS 607
Query: 301 LVEV 304
VE+
Sbjct: 608 WVEI 611
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 129/253 (50%), Gaps = 6/253 (2%)
Query: 3 AKCNCGNLSY--KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
A CG++ Y ++F S++ WN++++ I + ++EA+++++ M+ +V PD T
Sbjct: 108 ASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYT 167
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGF-LYRLEVASILVDIYSKCGSLGYAHHIFNII 119
+S+ A++ L+ K+A H + G + + V S LVD+Y K G A + + +
Sbjct: 168 LSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRV 227
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
++KD+++ +A+I Y + G AV F M+ V+PN+ T+ SVL +C ++ +
Sbjct: 228 --EEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGN 285
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
G + M+K + T ++ + R +DD+ + + + PN W +L+ V
Sbjct: 286 GKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEY-PNQVSWTSLISGLV 344
Query: 240 SHENVELGEVAAR 252
+ E+ + R
Sbjct: 345 QNGREEMALIEFR 357
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 79 NIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGK 138
I ++++SGF + S LVD KCG + YA +F+ + ++ I+ W+++IA K
Sbjct: 86 TIQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQVFD--GMSERHIVTWNSLIAYLIK 142
Query: 139 HGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
H + AV ++ M+ + V P++ T +SV A S + L E
Sbjct: 143 HRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEA 184
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 179/303 (59%), Gaps = 3/303 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YA L+ F KT +K T WN++++ + N +EA+ LF +M +E +PD T
Sbjct: 353 YASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTL 412
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
SLL A L +L+ M +H ++++ + + V + L+ +YS+CG + + IF+ + L
Sbjct: 413 TSLLSASTGLVNLRLGMQMHQIVVKT-VIPDVPVHNALITMYSRCGEIMESRRIFDEMKL 471
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
K +++I W+A+I Y HG+ A++LF M +G+ P+ +TF SVL+AC+H GLVDE
Sbjct: 472 K-REVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAK 530
Query: 182 SLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ F M+ + I P ++HY+ ++++ G+ ++A +I +MP +P+ VWGALL AC
Sbjct: 531 AQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRI 590
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
+ NV L VAA LEPE++ Y+LL N+YA +G W + +VR + ++K S
Sbjct: 591 YNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSS 650
Query: 301 LVE 303
V+
Sbjct: 651 WVD 653
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 103/258 (39%), Gaps = 55/258 (21%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F K ++ W+A+++GF N A+ LF++M V+D P A L+
Sbjct: 158 LFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNE----- 212
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
RL A+ ++ Y GSL + ++ + ++ +I
Sbjct: 213 ------------------RLSEAAWVLGQY---GSL---------VSGREDLVYAYNTLI 242
Query: 134 AAYGKHGHGEMAVSLFNEM-----------VQSGVKPNQVTFTSVLHACSHVGLVDEGLS 182
YG+ G E A LF+++ + N V++ S++ A VG V
Sbjct: 243 VGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARL 302
Query: 183 LFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHE 242
LF M I + +ID R++DA+ L MP + H+ W ++ S
Sbjct: 303 LFDQMKDRDTIS----WNTMIDGYVHVSRMEDAFALFSEMPNRDAHS-WNMMVSGYASVG 357
Query: 243 NVELGEVAARWTFELEPE 260
NVEL AR FE PE
Sbjct: 358 NVEL----ARHYFEKTPE 371
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 15/150 (10%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F K + T WN ++SG++ +A +LF M DV T+N+++ Y
Sbjct: 62 IFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDV----VTWNTMISGYVSCGG 117
Query: 74 ---LKQAMNIHCYL-IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIW 129
L++A + + R F + + ++ Y+K +G A +F +P +++ + W
Sbjct: 118 IRFLEEARKLFDEMPSRDSFSW-----NTMISGYAKNRRIGEALLLFEKMP--ERNAVSW 170
Query: 130 SAIIAAYGKHGHGEMAVSLFNEMVQSGVKP 159
SA+I + ++G + AV LF +M P
Sbjct: 171 SAMITGFCQNGEVDSAVVLFRKMPVKDSSP 200
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/293 (38%), Positives = 168/293 (57%), Gaps = 4/293 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED--VQPDNATFNSLLPAYAI 70
++F SKK ++A+++ + N ++A++LF QML + +QPD T +S++ A +
Sbjct: 284 ELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQ 343
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
L + + Y+ G +++ L+D+Y K G A +F+ L KD + +S
Sbjct: 344 LGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFS--NLNKKDTVSYS 401
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
A+I G +G A SLF M++ + PN VTFT +L A SH GLV EG F M H
Sbjct: 402 AMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDH 461
Query: 191 HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVA 250
++ P DHY ++D+LGRAGRL++AY LI++MP++PN VWGALL A H NVE GE+A
Sbjct: 462 NLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIA 521
Query: 251 ARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVE 303
+LE + TG LA +Y++VGRW D VRD + E L K S VE
Sbjct: 522 CSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 133/307 (43%), Gaps = 39/307 (12%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y++ L+ K F ++K T WN++L G++ + EA ++F ++ + D +
Sbjct: 148 LYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKI----PEKDAVS 203
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+N ++ +YA D+ A C L + L +IL+ Y C + A F+ +P
Sbjct: 204 WNLIISSYAKKGDMGNA----CSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMP 259
Query: 121 LKD-----------------------------KDIIIWSAIIAAYGKHGHGEMAVSLFNE 151
K+ KD +++ A+IA Y ++G + A+ LF +
Sbjct: 260 QKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQ 319
Query: 152 MVQ--SGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRA 209
M++ S ++P+++T +SV+ A S +G G + ++ +H I T +IDL +
Sbjct: 320 MLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKG 379
Query: 210 GRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYILLA 269
G A+ + + K + ++G ++ E + + P N + L
Sbjct: 380 GDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLL 439
Query: 270 NLYAAVG 276
+ Y+ G
Sbjct: 440 SAYSHSG 446
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 172/288 (59%), Gaps = 2/288 (0%)
Query: 18 TSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQA 77
+S K W ++SG N EA++ +K+M + V PD ATF ++L ++L+ L++
Sbjct: 692 SSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREG 751
Query: 78 MNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYG 137
IH + ++ L+D+Y+KCG + + +F+ + + +++ W+++I Y
Sbjct: 752 RAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMR-RRSNVVSWNSLINGYA 810
Query: 138 KHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML-KHHIIPLV 196
K+G+ E A+ +F+ M QS + P+++TF VL ACSH G V +G +F+ M+ ++ I V
Sbjct: 811 KNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARV 870
Query: 197 DHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFE 256
DH C++DLLGR G L +A + I +KP+ +W +LLGAC H + GE++A E
Sbjct: 871 DHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIE 930
Query: 257 LEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
LEP+N+ Y+LL+N+YA+ G W +R ++ + G++K+P S ++V
Sbjct: 931 LEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDV 978
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 2/223 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC + K+F +K WNA++ G+ HN + + ++LF M D+ T
Sbjct: 371 MYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFT 430
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F SLL A DL+ H +I+ L V + LVD+Y+KCG+L A IF
Sbjct: 431 FTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFE--R 488
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ D+D + W+ II +Y + + A LF M G+ + S L AC+HV + +G
Sbjct: 489 MCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG 548
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP 223
+ +K + + + +ID+ + G + DA + ++P
Sbjct: 549 KQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 3/230 (1%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F + S WN ++SG AI+ F M V+ +T S+L A I+A+
Sbjct: 283 LFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVAN 342
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
L + +H I+ G + V S LV +YSKC + A +F L++K+ + W+A+I
Sbjct: 343 LDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE--ALEEKNDVFWNAMI 400
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII 193
Y +G + LF +M SG + TFTS+L C+ ++ G ++K +
Sbjct: 401 RGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLA 460
Query: 194 PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHEN 243
+ ++D+ + G L+DA + M + N W ++G+ V EN
Sbjct: 461 KNLFVGNALVDMYAKCGALEDARQIFERMCDRDN-VTWNTIIGSYVQDEN 509
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 92/171 (53%), Gaps = 3/171 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + ++F + + WN ++ ++ + EA LFK+M + + D A
Sbjct: 472 MYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGAC 531
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S L A + L Q +HC ++ G L S L+D+YSKCG + A +F+ +P
Sbjct: 532 LASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHAC 171
+ ++ +A+IA Y ++ + E AV LF EM+ GV P+++TF +++ AC
Sbjct: 592 --EWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEAC 639
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 114/238 (47%), Gaps = 7/238 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC + K+F + NA+++G+ N+L EA+ LF++ML V P T
Sbjct: 573 MYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEIT 631
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASI-LVDIYSKCGSLGYAHHIFNII 119
F +++ A L H + + GF E I L+ +Y + A +F+ +
Sbjct: 632 FATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSEL 691
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
K I++W+ +++ + ++G E A+ + EM GV P+Q TF +VL CS + + E
Sbjct: 692 S-SPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLRE 750
Query: 180 GLSLFQ--FMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
G ++ F L H + L + +ID+ + G + + + M + N W +L+
Sbjct: 751 GRAIHSLIFHLAHDLDELTSN--TLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLI 806
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 12/253 (4%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YAKC + + K F K TA WN++LS + + ++ F + + P+ T
Sbjct: 104 LYAKCAQVSYAEKQFDFLEKDVTA-WNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFT 162
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F+ +L A +++ IHC +I+ G LVD+Y+KC + A +F I
Sbjct: 163 FSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIV 222
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
D + + W+ + + Y K G E AV +F M G +P+ + F +V++ +G + +
Sbjct: 223 --DPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDA 280
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAG----RLDDAYNLIRTMPIKPNHAVWGALLG 236
LF M P V + +I G+ G ++ +N+ R +K + G++L
Sbjct: 281 RLLFGEMSS----PDVVAWNVMISGHGKRGCETVAIEYFFNM-RKSSVKSTRSTLGSVLS 335
Query: 237 ACVSHENVELGEV 249
A N++LG V
Sbjct: 336 AIGIVANLDLGLV 348
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 95 VASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ 154
+ + +VD+Y+KC + YA F+ + +KD+ W+++++ Y G + F + +
Sbjct: 97 LGNAIVDLYAKCAQVSYAEKQFDFL---EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFE 153
Query: 155 SGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTC---IIDLLGRAGR 211
+ + PN+ TF+ VL C+ V+ G + M+K + L + C ++D+ + R
Sbjct: 154 NQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIK---MGLERNSYCGGALVDMYAKCDR 210
Query: 212 LDDAYNLIRTMPIKPNHAVWGALLGACV 239
+ DA + + + PN W L V
Sbjct: 211 ISDARRVFEWI-VDPNTVCWTCLFSGYV 237
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/305 (37%), Positives = 169/305 (55%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC + F +K T WN V++G+ + + EA+ L M V D T
Sbjct: 268 MYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFT 327
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ ++ LA L+ H LIR+GF + + LVD YSK G + A ++F+ +P
Sbjct: 328 LSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLP 387
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
K+II W+A++ Y HG G AV LF +M+ + V PN VTF +VL AC++ GL ++G
Sbjct: 388 --RKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQG 445
Query: 181 LSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+F M + H I P HY C+I+LLGR G LD+A IR P+K +W ALL AC
Sbjct: 446 WEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACR 505
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
EN+ELG V A + + PE GNY+++ N+Y ++G+ + V + + GL +PA
Sbjct: 506 MQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPAC 565
Query: 300 SLVEV 304
+ VEV
Sbjct: 566 TWVEV 570
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 117/241 (48%), Gaps = 3/241 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
M+ KC + ++F + ++ + +++SGF++ EA +LFK M E + T
Sbjct: 167 MHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHT 226
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F +L A A L + +H ++ G + V+ L+D+YSKCG + A F +P
Sbjct: 227 FAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMP 286
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+K + W+ +IA Y HG+ E A+ L +M SGV +Q T + ++ + + ++
Sbjct: 287 --EKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELT 344
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
++++ + T ++D + GR+D A + +P + N W AL+G +
Sbjct: 345 KQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLP-RKNIISWNALMGGYAN 403
Query: 241 H 241
H
Sbjct: 404 H 404
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 95/203 (46%), Gaps = 4/203 (1%)
Query: 40 REAIQLFKQMLVE-DVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASI 98
REA +LF+ + + + +T+++L+ A L ++ ++ +++ +GF + +
Sbjct: 104 REAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNR 163
Query: 99 LVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVK 158
++ ++ KCG + A +F+ IP ++++ + +II+ + G+ A LF M +
Sbjct: 164 ILLMHVKCGMIIDARRLFDEIP--ERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSD 221
Query: 159 PNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNL 218
TF +L A + +G + G L LK ++ +ID+ + G ++DA
Sbjct: 222 CETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCA 281
Query: 219 IRTMPIKPNHAVWGALLGACVSH 241
MP K A W ++ H
Sbjct: 282 FECMPEKTTVA-WNNVIAGYALH 303
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/297 (36%), Positives = 172/297 (57%), Gaps = 7/297 (2%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
++F +K W +++G+ N +A++ F +M+ V D+ + ++L A + LA
Sbjct: 292 EVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLA 351
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
L IH LI GF V + LV++Y+KCG + A F I +KD++ W+ +
Sbjct: 352 LLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIA--NKDLVSWNTM 409
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
+ A+G HG + A+ L++ M+ SG+KP+ VTF +L CSH GLV+EG +F+ M+K +
Sbjct: 410 LFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYR 469
Query: 193 IPL-VDHYTCIIDLLGRAGRLDDAYNLIRT----MPIKPNHAVWGALLGACVSHENVELG 247
IPL VDH TC+ID+ GR G L +A +L T + N++ W LLGAC +H + ELG
Sbjct: 470 IPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELG 529
Query: 248 EVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
++ EP +++LL+NLY + GRW++ E VR + E G++K P S +EV
Sbjct: 530 REVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEV 586
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 131/294 (44%), Gaps = 41/294 (13%)
Query: 23 TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHC 82
T WN +L+ + L +EAI LF Q+ D +PD+ +F ++L A L ++K I
Sbjct: 35 TVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQS 94
Query: 83 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAY------ 136
+IRSGF L V + L+D+Y KC A+ +F + ++ + W +++ AY
Sbjct: 95 LVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQF 154
Query: 137 ----------------------GKHGHG---EMAVSLFNEMVQSGVKPNQVTFTSVLHAC 171
H H E +SLF EM++S KP+ TF+S+++AC
Sbjct: 155 EAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNAC 214
Query: 172 S-HVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAV 230
S V G + MLK+ V+ ++ + G DDA + ++ +
Sbjct: 215 SADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEV-LTQVS 273
Query: 231 WGALLGACVSHENVELGEV-AARWTFELEPENTGNYILLANLYAAVGRWRDVEK 283
W +++ AC +++GE A F L PE N + + GR D E+
Sbjct: 274 WNSIIDAC-----MKIGETEKALEVFHLAPEK--NIVTWTTMITGYGRNGDGEQ 320
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 98/199 (49%), Gaps = 34/199 (17%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPA-YAILA 72
+F++ K+ WN ++SG H + LFK+ML + +PD TF+SL+ A A +
Sbjct: 160 VFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSS 219
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH------------------- 113
++ +H ++++G+ +E + ++ Y+K GS A
Sbjct: 220 NVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIID 279
Query: 114 ------------HIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQ 161
+F++ P +K+I+ W+ +I YG++G GE A+ F EM++SGV +
Sbjct: 280 ACMKIGETEKALEVFHLAP--EKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDH 337
Query: 162 VTFTSVLHACSHVGLVDEG 180
+ +VLHACS + L+ G
Sbjct: 338 FAYGAVLHACSGLALLGHG 356
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 9/156 (5%)
Query: 97 SILVDIYSKCGSLG------YAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFN 150
S+LV + SK SL A +F+ +P + D + W+ ++ +Y + G + A++LF
Sbjct: 2 SVLVRLTSKIASLAKSGRIASARQVFDGMP--ELDTVAWNTMLTSYSRLGLHQEAIALFT 59
Query: 151 EMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAG 210
++ S KP+ +FT++L C+ +G V G + +++ + +ID+ G+
Sbjct: 60 QLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCS 119
Query: 211 RLDDAYNLIRTMPIKP-NHAVWGALLGACVSHENVE 245
A + R M N W +LL A ++ E E
Sbjct: 120 DTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFE 155
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YAKC + + F + K WN +L F + LA +A++L+ M+ ++PDN T
Sbjct: 381 LYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVT 440
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYR--LEV--ASILVDIYSKCGSLGYAHHI- 115
F LL + +++ I +++ YR LEV + ++D++ + G L A +
Sbjct: 441 FIGLLTTCSHSGLVEEGCMIFESMVKD---YRIPLEVDHVTCMIDMFGRGGHLAEAKDLA 497
Query: 116 --FNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
++ + + W ++ A H H E+
Sbjct: 498 TTYSSLVTDSSNNSSWETLLGACSTHWHTELG 529
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 179/299 (59%), Gaps = 9/299 (3%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F + + W+ +++G++ L E +++FK+MLV ++PD + + L A A +
Sbjct: 173 KVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVG 232
Query: 73 DLKQAMNIHCYLIRSGFLYR-LEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
L Q IH ++ + ++ + V + LVD+Y+KCG + A +F L +++ W+A
Sbjct: 233 ALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFE--KLTRRNVFSWAA 290
Query: 132 IIAAYGKHGHGEMAVSLFNEMV-QSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM-LK 189
+I Y +G+ + A + + + + G+KP+ V VL AC+H G ++EG ++ + M +
Sbjct: 291 LIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEAR 350
Query: 190 HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEV 249
+ I P +HY+CI+DL+ RAGRLDDA +LI MP+KP +VWGALL C +H+NVELGE+
Sbjct: 351 YGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGEL 410
Query: 250 AARWTFELEP----ENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
A + +LE E + L+N+Y +V R + KVR M+ + G+RK P SL+EV
Sbjct: 411 AVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEV 469
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 96/189 (50%), Gaps = 7/189 (3%)
Query: 52 EDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSG-FLYRLEVASILVDIYSKCGSLG 110
ED+ P TF+ L+ A IHC+++++G FL V + ++ IY + L
Sbjct: 110 EDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLF 169
Query: 111 YAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHA 170
A +F+ IP D++ W ++ Y + G G + +F EM+ G++P++ + T+ L A
Sbjct: 170 DARKVFDEIP--QPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTA 227
Query: 171 CSHVGLVDEGLSLFQFMLKHHIIPLVDHY--TCIIDLLGRAGRLDDAYNLIRTMPIKPNH 228
C+ VG + +G + +F+ K I D + T ++D+ + G ++ A + + + N
Sbjct: 228 CAQVGALAQGKWIHEFVKKKRWIE-SDVFVGTALVDMYAKCGCIETAVEVFEKLT-RRNV 285
Query: 229 AVWGALLGA 237
W AL+G
Sbjct: 286 FSWAALIGG 294
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 78/172 (45%), Gaps = 6/172 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNA 59
MYAKC C + ++F K +++ W A++ G+ A++A ++ ED ++PD+
Sbjct: 263 MYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSV 322
Query: 60 TFNSLLPAYAILADLKQAMN-IHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
+L A A L++ + R G + E S +VD+ + G L A +
Sbjct: 323 VLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEK 382
Query: 119 IPLKDKDIIIWSAIIAAYGKHGH---GEMAVSLFNEMVQSGVKPNQVTFTSV 167
+P+K +W A++ H + GE+AV ++ + V+ + +
Sbjct: 383 MPMKPL-ASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQL 433
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 114/310 (36%), Positives = 175/310 (56%), Gaps = 8/310 (2%)
Query: 1 MYAKCN-CGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNS-LAREAIQLFKQMLVEDVQP 56
Y+KC C + S K+F + WN ++SG+ N L+ EA++ F+QM +P
Sbjct: 284 FYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRP 343
Query: 57 DNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLY-RLEVASILVDIYSKCGSLGYAHHI 115
D+ +F + A + L+ Q IH I+S R+ V + L+ +Y K G+L A +
Sbjct: 344 DDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWV 403
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVG 175
F+ +P + + + ++ +I Y +HGHG A+ L+ M+ SG+ PN++TF +VL AC+H G
Sbjct: 404 FDRMP--ELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCG 461
Query: 176 LVDEGLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGAL 234
VDEG F M + I P +HY+C+IDLLGRAG+L++A I MP KP W AL
Sbjct: 462 KVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAAL 521
Query: 235 LGACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLR 294
LGAC H+N+ L E AA ++P Y++LAN+YA +W ++ VR + +R
Sbjct: 522 LGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIR 581
Query: 295 KLPAQSLVEV 304
K P S +EV
Sbjct: 582 KKPGCSWIEV 591
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 127/301 (42%), Gaps = 41/301 (13%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
WN+++ + + +A+ L+K+M+ + + D T S+L A L L H LI
Sbjct: 208 WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII-PLKDKDIIIWSAIIAAYGKHGH-GE 143
++GF V S L+D YSKCG + + + D+++W+ +I+ Y + E
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSE 327
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIP-LVDHYTCI 202
AV F +M + G +P+ +F V ACS++ + + +K HI + +
Sbjct: 328 EAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNAL 387
Query: 203 IDLLGRAGRLDDAYNLIRTMP----------------------------------IKPNH 228
I L ++G L DA + MP I PN
Sbjct: 388 ISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNK 447
Query: 229 AVWGALLGACVSHENVELGEV---AARWTFELEPENTGNYILLANLYAAVGRWRDVEKVR 285
+ A+L AC V+ G+ + TF++EPE +Y + +L G+ + E+
Sbjct: 448 ITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPE-AEHYSCMIDLLGRAGKLEEAERFI 506
Query: 286 D 286
D
Sbjct: 507 D 507
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 120/254 (47%), Gaps = 9/254 (3%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YAK + +++ ++F + + T +N ++SG+ A+ LFK+M + D T
Sbjct: 84 YAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTL 143
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF-NIIP 120
+ L+ A DL + +HC+ + GF V + V YSK G L A +F +
Sbjct: 144 SGLIAACCDRVDLIK--QLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDE 201
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
L+D+ + W+++I AYG+H G A++L+ EM+ G K + T SVL+A + + + G
Sbjct: 202 LRDE--VSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGG 259
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP--IKPNHAVWGALLGAC 238
++K + +ID + G D Y+ + + P+ VW ++
Sbjct: 260 RQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGY 319
Query: 239 VSHENVELGEVAAR 252
+E EL E A +
Sbjct: 320 SMNE--ELSEEAVK 331
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 163/280 (58%), Gaps = 3/280 (1%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
W ++ G++ E++++F++M + PD T S+L A A L L+ I Y+
Sbjct: 336 WTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYID 395
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
++ + V + L+D+Y KCG A +F+ + +DK W+A++ +G G+ A
Sbjct: 396 KNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDK--FTWTAMVVGLANNGQGQEA 453
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK-HHIIPLVDHYTCIID 204
+ +F +M ++P+ +T+ VL AC+H G+VD+ F M H I P + HY C++D
Sbjct: 454 IKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVD 513
Query: 205 LLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGN 264
+LGRAG + +AY ++R MP+ PN VWGALLGA H + + E+AA+ ELEP+N
Sbjct: 514 MLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAV 573
Query: 265 YILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
Y LL N+YA RW+D+ +VR + +V ++K P SL+EV
Sbjct: 574 YALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEV 613
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 117/250 (46%), Gaps = 8/250 (3%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
+YK+F+K + WN ++ G+ E ++L+ ML E V PD+ TF LL
Sbjct: 87 AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR 146
Query: 71 LAD-LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIW 129
L +HC++++ G L V + LV +YS CG + A +F+ +D+ W
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFD--RRCKEDVFSW 204
Query: 130 SAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK 189
+ +I+ Y + E ++ L EM ++ V P VT VL ACS V D + +++ +
Sbjct: 205 NLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSE 264
Query: 190 HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEV 249
P + +++ G +D A + R+M + + W +++ V N++L
Sbjct: 265 CKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYVERGNLKL--- 320
Query: 250 AARWTFELEP 259
AR F+ P
Sbjct: 321 -ARTYFDQMP 329
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 129/289 (44%), Gaps = 37/289 (12%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+ C +++ +F + K+ WN ++SG+ E+I+L +M V P + T
Sbjct: 179 MYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVT 238
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L A + + D +H Y+ L + + LV+ Y+ CG + A IF
Sbjct: 239 LLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFR--S 296
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMA-------------------------------VSLF 149
+K +D+I W++I+ Y + G+ ++A + +F
Sbjct: 297 MKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIF 356
Query: 150 NEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRA 209
EM +G+ P++ T SVL AC+H+G ++ G + ++ K+ I V +ID+ +
Sbjct: 357 REMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKC 416
Query: 210 GRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELE 258
G + A + M + + W A++ V N G+ A + F+++
Sbjct: 417 GCSEKAQKVFHDMDQR-DKFTWTAMV---VGLANNGQGQEAIKVFFQMQ 461
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 8/149 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC C + K+F ++ W A++ G +N +EAI++F QM +QPD+ T
Sbjct: 412 MYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDIT 471
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASI----LVDIYSKCGSLGYAHHIF 116
+ +L A + QA + RS +R+E + + +VD+ + G + A+ I
Sbjct: 472 YLGVLSACNHSGMVDQARKFFAKM-RSD--HRIEPSLVHYGCMVDMLGRAGLVKEAYEIL 528
Query: 117 NIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+P+ + + I+W A++ A H MA
Sbjct: 529 RKMPM-NPNSIVWGALLGASRLHNDEPMA 556
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 204 bits (520), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 117/337 (34%), Positives = 178/337 (52%), Gaps = 37/337 (10%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIH----------------------NSL 38
MY KC L+ + F KK WN ++ GF+ NSL
Sbjct: 278 MYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSL 337
Query: 39 ----------AREAIQLFKQM-LVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRS 87
R +LF +M +VE V+PD T SL+ A +L +H +IR
Sbjct: 338 LFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRL 397
Query: 88 GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVS 147
++S L+D+Y KCG + A +F +KD+ +W+++I HG+G+ A+
Sbjct: 398 QLKGDAFLSSALIDMYCKCGIIERAFMVFKTAT--EKDVALWTSMITGLAFHGNGQQALQ 455
Query: 148 LFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML-KHHIIPLVDHYTCIIDLL 206
LF M + GV PN VT +VL ACSH GLV+EGL +F M K P +HY ++DLL
Sbjct: 456 LFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLL 515
Query: 207 GRAGRLDDAYNLI-RTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNY 265
RAGR+++A +++ + MP++P+ ++WG++L AC E++E E+A +LEPE G Y
Sbjct: 516 CRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGY 575
Query: 266 ILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLV 302
+LL+N+YA VGRW +K R+ + G++K S V
Sbjct: 576 VLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSV 612
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 137/296 (46%), Gaps = 39/296 (13%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F + + +N ++ G+ + EA++L+ +M+ + ++PD T SLL L+
Sbjct: 187 KVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLS 246
Query: 73 DLKQAMNIHCYLIRSGFLY--RLEVASILVDIYSKCGSLGYAHHIFNIIPLKD------- 123
D++ +H ++ R G +Y L +++ L+D+Y KC G A F+ + KD
Sbjct: 247 DIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTM 306
Query: 124 ----------------------KDIIIWSAIIAAYGKHGHGEMAV-SLFNEM-VQSGVKP 159
+D++ W++++ Y K G + V LF EM + VKP
Sbjct: 307 VVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKP 366
Query: 160 NQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLI 219
++VT S++ ++ G + G + +++ + + +ID+ + G ++ A+ +
Sbjct: 367 DRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVF 426
Query: 220 RTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENT--GNYILLANLYA 273
+T K + A+W +++ H N G+ A + ++ E N LLA L A
Sbjct: 427 KTATEK-DVALWTSMITGLAFHGN---GQQALQLFGRMQEEGVTPNNVTLLAVLTA 478
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 8/156 (5%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N ++S +S E L+ M+ V PD TF L+ A + L+++KQ IHC++I
Sbjct: 103 YNTMISAV--SSSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVKQ---IHCHII 157
Query: 86 RSGFLYRLE-VASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEM 144
SG L + + LV Y + G+ G A +F +P D+ ++ +I Y K G
Sbjct: 158 VSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMP--HPDVSSFNVMIVGYAKQGFSLE 215
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
A+ L+ +MV G++P++ T S+L C H+ + G
Sbjct: 216 ALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLG 251
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 204 bits (519), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 173/308 (56%), Gaps = 7/308 (2%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNAT 60
YA+ + + +F ++ WNA+L+ N L EA+ LF++M+ E ++P+ T
Sbjct: 203 YARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVT 262
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L A A L+ A IH + R + V++ LVD+Y KCG+L A +F +
Sbjct: 263 VVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMA- 321
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ---SGVKPNQVTFTSVLHACSHVGLV 177
K + W+++I + HG E A+++F EM++ + +KP+ +TF +L+AC+H GLV
Sbjct: 322 -SKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLV 380
Query: 178 DEGLSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG 236
+G F M + I P ++HY C+IDLLGRAGR D+A ++ TM +K + A+WG+LL
Sbjct: 381 SKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLN 440
Query: 237 ACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKL 296
AC H +++L EVA + L P N G ++ANLY +G W + + R M+ K
Sbjct: 441 ACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKP 500
Query: 297 PAQSLVEV 304
P S +E+
Sbjct: 501 PGWSRIEI 508
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 1 MYAKCNCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQML---VEDVQ 55
+Y KC GNL + +F SKK WN++++ F + + EAI +F++M+ + D++
Sbjct: 304 LYGKC--GNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIK 361
Query: 56 PDNATFNSLLPAYAILADLKQAMNIHCYLI-RSGFLYRLEVASILVDIYSKCGSLGYAHH 114
PD+ TF LL A + + + R G R+E L+D+ + G A
Sbjct: 362 PDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALE 421
Query: 115 IFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVL 168
+ + + +K D IW +++ A HGH ++A +V + PN + +++
Sbjct: 422 VMSTMKMK-ADEAIWGSLLNACKIHGHLDLAEVAVKNLV--ALNPNNGGYVAMM 472
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 204 bits (518), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 175/291 (60%), Gaps = 5/291 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHN-SLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAIL 71
++F T K +NA++ GF + A+ ++ ++ M P+ +TF S++ A ++L
Sbjct: 227 EIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVL 286
Query: 72 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
+ +H +++SG +++ S L+D+Y+KCG + A +F+ +++K++ W++
Sbjct: 287 TSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFD--QMQEKNVFSWTS 344
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH 191
+I YGK+G+ E A+ LF M + ++PN VTF L ACSH GLVD+G +F+ M + +
Sbjct: 345 MIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDY 404
Query: 192 II-PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVA 250
+ P ++HY CI+DL+GRAG L+ A+ R MP +P+ +W ALL +C H NVEL +A
Sbjct: 405 SMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIA 464
Query: 251 ARWTFELEPENT-GNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
A F+L + G Y+ L+N+YA+ +W +V K+R+++ + K +S
Sbjct: 465 ASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 138/322 (42%), Gaps = 46/322 (14%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
++ KC C + + ++F + K + +N ++SG++ + L +E + L ++M + D T
Sbjct: 78 LHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYT 137
Query: 61 FNSLLPA-----YAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSL------ 109
+ +L A ++ +H +I+ + + LVD Y K G L
Sbjct: 138 LSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTV 197
Query: 110 -----------------GY--------AHHIFNIIPLKDKDIIIWSAIIAAYGKHGH-GE 143
GY A IFN K KDI++++A++ + + G +
Sbjct: 198 FETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTT--KVKDIVVYNAMVEGFSRSGETAK 255
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
+V ++ M ++G PN TF SV+ ACS + + G + ++K + + + ++
Sbjct: 256 RSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLL 315
Query: 204 DLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG-EVAARWT-FELEPEN 261
D+ + G ++DA + M K N W +++ + N E E+ R F +EP
Sbjct: 316 DMYAKCGGINDARRVFDQMQEK-NVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEP-- 372
Query: 262 TGNYILLANLYAAVGRWRDVEK 283
NY+ +A V+K
Sbjct: 373 --NYVTFLGALSACSHSGLVDK 392
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 2/155 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC N + ++F + +K W +++ G+ N EA++LF +M ++P+ T
Sbjct: 317 MYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVT 376
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F L A + + + I + R ++E + +VD+ + G L A +
Sbjct: 377 FLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAM 436
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ 154
P + D IW+A++++ HG+ E+A +E+ +
Sbjct: 437 PER-PDSDIWAALLSSCNLHGNVELASIAASELFK 470
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 56 PDNATFNSLLPAYAILADLKQAMN---------IHCYLIRSGFLYRLEVASILVDIYSKC 106
P +SL PA I L++ +N IH +I++GF L ++ L+ ++ KC
Sbjct: 23 PLKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKC 82
Query: 107 GSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTS 166
G L YA +F+ +P + ++ +I+ Y KHG + + L M SG K + T +
Sbjct: 83 GCLSYARQVFDELP--KPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSM 140
Query: 167 VLHACSHVG----LVDEGLSLFQFMLKHHIIPLVD-HYTCIIDLLGRAGRLDDAYNLIRT 221
VL A + G L L + + L D T ++D ++G+L+ A + T
Sbjct: 141 VLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFET 200
Query: 222 M 222
M
Sbjct: 201 M 201
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/307 (34%), Positives = 177/307 (57%), Gaps = 6/307 (1%)
Query: 1 MYAKCNCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQM-LVEDVQPD 57
++ CN ++ + K+F ++ WN ++ G+ N +E I+LF++M + PD
Sbjct: 214 IHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPD 273
Query: 58 NATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
+ T S+LPA + L HC++ R +++V + ++D+YSKCG + A IF+
Sbjct: 274 DVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFD 333
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLV 177
+P +K + W+A+I Y +G+ A+ LF M+ KP+++T +V+ AC+H GLV
Sbjct: 334 EMP--EKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLV 390
Query: 178 DEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+EG F M + + ++HY C++DLLGRAG L +A +LI MP +PN + + L A
Sbjct: 391 EEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSA 450
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
C ++++E E + ELEP+N GNY+LL NLYAA RW D V++++ + +K
Sbjct: 451 CGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEV 510
Query: 298 AQSLVEV 304
SL+E+
Sbjct: 511 GCSLIEI 517
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 116/241 (48%), Gaps = 18/241 (7%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQMLVEDV-QPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
N+++ ++ ++ L++ + E PDN TF +L + ++ + Q + +H +
Sbjct: 46 NSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIW 105
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
R GF + V++ +VD+Y+K G +G A + F+ +P + + + W+A+I+ Y + G ++A
Sbjct: 106 RFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSE--VSWTALISGYIRCGELDLA 163
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDL 205
LF++M VK + V + +++ G + LF M +I +T +I
Sbjct: 164 SKLFDQMPH--VK-DVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVIT----WTTMIHG 216
Query: 206 LGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG-----EVAARWTFELEPE 260
+D A L MP + N W ++G ++ + G E+ A T L+P+
Sbjct: 217 YCNIKDIDAARKLFDAMPER-NLVSWNTMIGGYCQNKQPQEGIRLFQEMQA--TTSLDPD 273
Query: 261 N 261
+
Sbjct: 274 D 274
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 105/237 (44%), Gaps = 13/237 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQML-VEDVQPDNA 59
MYAK + F + + W A++SG+I A +LF QM V+DV
Sbjct: 122 MYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDV----V 177
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
+N+++ + D+ A + + + + ++ Y + A +F+ +
Sbjct: 178 IYNAMMDGFVKSGDMTSARRLFDEMTHKTVI----TWTTMIHGYCNIKDIDAARKLFDAM 233
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEM-VQSGVKPNQVTFTSVLHACSHVGLVD 178
P +++++ W+ +I Y ++ + + LF EM + + P+ VT SVL A S G +
Sbjct: 234 P--ERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALS 291
Query: 179 EGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
G F+ + + V T I+D+ + G ++ A + MP K A W A++
Sbjct: 292 LGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEK-QVASWNAMI 347
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 177/307 (57%), Gaps = 5/307 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
Y KC S +F + K W ++++ ++ N +A L+ + + V+ +
Sbjct: 253 FYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFM 312
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+S+L A A +A L+ +IH + +++ + V S LVD+Y KCG + + F+ +P
Sbjct: 313 ISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP 372
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGV--KPNQVTFTSVLHACSHVGLVD 178
+K+++ +++I Y G +MA++LF EM G PN +TF S+L ACS G V+
Sbjct: 373 --EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVE 430
Query: 179 EGLSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
G+ +F M + I P +HY+CI+D+LGRAG ++ AY I+ MPI+P +VWGAL A
Sbjct: 431 NGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNA 490
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
C H +LG +AA F+L+P+++GN++LL+N +AA GRW + VR+ + VG++K
Sbjct: 491 CRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGA 550
Query: 298 AQSLVEV 304
S + V
Sbjct: 551 GYSWITV 557
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 134/285 (47%), Gaps = 9/285 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY K + + K+F + ++ WNA +S + + REAI+ F + D P++ T
Sbjct: 152 MYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSIT 211
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F + L A + L M +H ++RSGF + V + L+D Y KC + + IF
Sbjct: 212 FCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFT--E 269
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ K+ + W +++AAY ++ E A L+ + V+ + +SVL AC+ + ++ G
Sbjct: 270 MGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELG 329
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
S+ +K + + + ++D+ G+ G ++D+ MP K N +L+G
Sbjct: 330 RSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK-NLVTRNSLIGGYAH 388
Query: 241 HENVELGEVAARWTFELEPENTG---NYILLANLYAAVGRWRDVE 282
V++ A E+ P G NY+ +L +A R VE
Sbjct: 389 QGQVDM---ALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVE 430
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 105/249 (42%), Gaps = 3/249 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+K + + + T + W +++SG N A+ F +M E V P++ T
Sbjct: 51 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 110
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F A A L IH ++ G + + V D+Y K A +F+ IP
Sbjct: 111 FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 170
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++++ W+A I+ G A+ F E + PN +TF + L+ACS ++ G
Sbjct: 171 --ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLG 228
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ L +L+ V +ID G+ ++ + + M K N W +L+ A V
Sbjct: 229 MQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLVAAYVQ 287
Query: 241 HENVELGEV 249
+ E V
Sbjct: 288 NHEDEKASV 296
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 203 bits (516), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 171/306 (55%), Gaps = 4/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+K + +F + + W ++SG+ EA+ LF M+ +PD T
Sbjct: 300 MYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVT 359
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLY-RLEVASILVDIYSKCGSLGYAHHIFNII 119
SL+ L+ I G + + + L+D+YSKCGS+ A IF+
Sbjct: 360 LLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNT 419
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
P +K ++ W+ +IA Y +G A+ LF++M+ KPN +TF +VL AC+H G +++
Sbjct: 420 P--EKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEK 477
Query: 180 GLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G F M + ++I P +DHY+C++DLLGR G+L++A LIR M KP+ +WGALL AC
Sbjct: 478 GWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNAC 537
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H NV++ E AA F LEP+ Y+ +AN+YAA G W ++R ++ + ++K P
Sbjct: 538 KIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPG 597
Query: 299 QSLVEV 304
+S+++V
Sbjct: 598 ESVIQV 603
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 93/180 (51%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
M+ KCN + + K+F + ++ WNA+LSGF + +A LF++M + ++ PD+ T
Sbjct: 96 MFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVT 155
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L+ + + LK +H IR G ++ VA+ + Y KCG L A +F I
Sbjct: 156 VMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAID 215
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
D+ ++ W+++ AY G A L+ M++ KP+ TF ++ +C + + +G
Sbjct: 216 RGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQG 275
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 10/194 (5%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
WN + ++ + E++ LF++M +P+N TF + A A LAD+ +H +LI
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+S F + V + VD++ KC S+ YA +F +P ++D W+A+++ + + GH + A
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMP--ERDATTWNAMLSGFCQSGHTDKA 137
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCI--- 202
SLF EM + + P+ VT +++ + S ++ L L + M I VD +
Sbjct: 138 FSLFREMRLNEITPDSVTVMTLIQSAS----FEKSLKLLEAMHAVGIRLGVDVQVTVANT 193
Query: 203 -IDLLGRAGRLDDA 215
I G+ G LD A
Sbjct: 194 WISTYGKCGDLDSA 207
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 118/289 (40%), Gaps = 59/289 (20%)
Query: 7 CGNL-SYKMFMKT---SKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFN 62
CG+L S K+ + + WN++ + A +A L+ ML E+ +PD +TF
Sbjct: 201 CGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFI 260
Query: 63 SLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK 122
+L + L Q IH + I G +E + + +YSK A +F+I +
Sbjct: 261 NLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDI--MT 318
Query: 123 DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLS 182
+ + W+ +I+ Y + G + A++LF+ M++SG KP+ VT S++ C G ++ G
Sbjct: 319 SRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG-- 376
Query: 183 LFQFMLKHHIIPLVDHYTC----------IIDLLGRAGRLDDAYNLIRTMP--------- 223
I D Y C +ID+ + G + +A ++ P
Sbjct: 377 -------KWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTT 429
Query: 224 -------------------------IKPNHAVWGALLGACVSHENVELG 247
KPNH + A+L AC ++E G
Sbjct: 430 MIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKG 478
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/306 (36%), Positives = 180/306 (58%), Gaps = 4/306 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQP-DNA 59
MYAKC + S +F + +++ WNA++SG+ N +A+ LF++M + VQ D+
Sbjct: 390 MYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSF 449
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T SLL A + L IHC +IRS V + LVD+YSKCG L A F+ I
Sbjct: 450 TVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSI 509
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
KD ++ W +IA YG HG G++A+ +++E + SG++PN V F +VL +CSH G+V +
Sbjct: 510 SWKD--VVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQ 567
Query: 180 GLSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
GL +F M++ + P +H C++DLL RA R++DA+ + +P+ V G +L AC
Sbjct: 568 GLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDAC 627
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
++ E+ ++ EL+P + G+Y+ L + +AA+ RW DV + + + +GL+KLP
Sbjct: 628 RANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPG 687
Query: 299 QSLVEV 304
S +E+
Sbjct: 688 WSKIEM 693
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 124/246 (50%), Gaps = 5/246 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y KC+ + +F + ++ WN ++SG+ E ++L +M + ++PD T
Sbjct: 188 LYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQT 247
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F + L + DL+ +HC ++++GF + + + L+ +Y KCG ++ + IP
Sbjct: 248 FGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIP 307
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+KD++ W+ +I+ + G E A+ +F+EM+QSG + SV+ +C+ +G D G
Sbjct: 308 --NKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLG 365
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
S+ ++L+H +I + + G LD + + M + + W A++
Sbjct: 366 ASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAIISGYA- 423
Query: 241 HENVEL 246
+NV+L
Sbjct: 424 -QNVDL 428
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
Query: 40 REAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASIL 99
++ + F ML + PD TF SLL A A L L ++IH ++ +GF ++S L
Sbjct: 28 KQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSL 87
Query: 100 VDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKP 159
V++Y+K G L +A +F ++++D++ W+A+I Y + G A SL NEM G+KP
Sbjct: 88 VNLYAKFGLLAHARKVFE--EMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKP 145
Query: 160 NQVTFTSVL 168
VT +L
Sbjct: 146 GPVTLLEML 154
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 108/225 (48%), Gaps = 5/225 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YAK + K+F + ++ W A++ + + EA L +M + ++P T
Sbjct: 90 LYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVT 149
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
LL + + ++ Q +H + + GF + V + ++++Y KC +G A +F+
Sbjct: 150 ---LLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFD--Q 204
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++ +D++ W+ +I+ Y G+ + L M G++P+Q TF + L + ++ G
Sbjct: 205 MEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMG 264
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK 225
L ++K + T +I + + G+ + +Y ++ T+P K
Sbjct: 265 RMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK 309
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 173/307 (56%), Gaps = 4/307 (1%)
Query: 1 MYAKCNCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
MY + G + + +F K WN++++GF L+ +A++ F + +++ D+
Sbjct: 349 MYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDD 408
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
F++LL + + LA L+ IH +SGF+ V S L+ +YSKCG + A F
Sbjct: 409 YAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQ 468
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
I K + W+A+I Y +HG G++++ LF++M VK + VTFT++L ACSH GL+
Sbjct: 469 ISSK-HSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQ 527
Query: 179 EGLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
EGL L M + I P ++HY +DLLGRAG ++ A LI +MP+ P+ V LG
Sbjct: 528 EGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGV 587
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
C + +E+ A E+EPE+ Y+ L+++Y+ + +W + V+ M+ E G++K+P
Sbjct: 588 CRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVP 647
Query: 298 AQSLVEV 304
S +E+
Sbjct: 648 GWSWIEI 654
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 133/294 (45%), Gaps = 56/294 (19%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNA 59
MYAKC +++ F + S+ + WNA+++GF+ + A L M ++ V D
Sbjct: 145 MYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAG 204
Query: 60 TFNSLL-----PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHH 114
TF LL P + L LKQ +H +++ G + + + + ++ Y+ CGS+ A
Sbjct: 205 TFAPLLTLLDDPMFCNL--LKQ---VHAKVLKLGLQHEITICNAMISSYADCGSVSDAKR 259
Query: 115 IFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSH- 173
+F+ + KD+I W+++IA + KH E A LF +M + V+ + T+T +L ACS
Sbjct: 260 VFDGLG-GSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGE 318
Query: 174 ------------------------------------VGLVDEGLSLFQFMLKHHIIPLVD 197
G +++ LSLF+ + +I
Sbjct: 319 EHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLIS--- 375
Query: 198 HYTCIIDLLGRAGRLDDA---YNLIRTMPIKPNHAVWGALLGACVSHENVELGE 248
+ II + G +DA ++ +R+ IK + + ALL +C ++LG+
Sbjct: 376 -WNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQ 428
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 85/165 (51%), Gaps = 3/165 (1%)
Query: 81 HCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHG 140
HCY I+ G + + V++ ++D Y K G LGYA+ +F+ +P +D + W+ +I+ Y G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDS--VSWNTMISGYTSCG 80
Query: 141 HGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYT 200
E A LF M +SG + +F+ +L + V D G + ++K V +
Sbjct: 81 KLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGS 140
Query: 201 CIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 245
++D+ + R++DA+ + + +PN W AL+ V +++
Sbjct: 141 SLVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALIAGFVQVRDIK 184
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F + K+ + WN ++SG+ +A LF M D +F+ LL A +
Sbjct: 57 LFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKR 116
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
+H +I+ G+ + V S LVD+Y+KC + A F I + + + W+A+I
Sbjct: 117 FDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEIS--EPNSVSWNALI 174
Query: 134 AAY 136
A +
Sbjct: 175 AGF 177
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 177/298 (59%), Gaps = 2/298 (0%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNATFNSLLPA 67
N + +F + +K W +++G++ N EA+ +F +ML + V+P+ T+ S+L A
Sbjct: 281 NKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSA 340
Query: 68 YAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDII 127
+ LA L + IH + +S V S L+++YSK G L A +F+ + +D+I
Sbjct: 341 CSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLI 400
Query: 128 IWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM 187
W+++IA Y HGHG+ A+ ++N+M + G KP+ VT+ ++L ACSH GLV++G+ F+ +
Sbjct: 401 SWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDL 460
Query: 188 LKHHIIPLV-DHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 246
++ +PL +HYTC++DL GRAGRL D N I + + + +GA+L AC H V +
Sbjct: 461 VRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSI 520
Query: 247 GEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
+ + E ++ G Y+L++N+YAA G+ + ++R + E GL+K P S V+V
Sbjct: 521 AKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKV 578
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
NL ++ +S+ R ++ EA +LF + DV T+ ++ Y
Sbjct: 32 NLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDV----VTWTHVITGY 87
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIII 128
L D+++A + R + + +V Y + L A +F +P +++++
Sbjct: 88 IKLGDMREAREL---FDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMP--ERNVVS 142
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML 188
W+ +I Y + G + A+ LF+EM + + V++ S++ A G +DE ++LF+ M
Sbjct: 143 WNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQRGRIDEAMNLFERMP 198
Query: 189 KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGE 248
+ ++ +T ++D L + G++D+A L MP + N W A++ + ++
Sbjct: 199 RRDVVS----WTAMVDGLAKNGKVDEARRLFDCMPER-NIISWNAMITGYAQNNRID--- 250
Query: 249 VAARWTFELEPE 260
A F++ PE
Sbjct: 251 -EADQLFQVMPE 261
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 101/225 (44%), Gaps = 14/225 (6%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F + ++ WN ++ G+ + +A++LF +M ++ ++NS++ A
Sbjct: 131 LFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQRGR 186
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
+ +AMN+ + R + + +VD +K G + A +F+ +P +++II W+A+I
Sbjct: 187 IDEAMNLFERMPRRDVVS----WTAMVDGLAKNGKVDEARRLFDCMP--ERNIISWNAMI 240
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII 193
Y ++ + A LF M + T + +++ LF M + ++I
Sbjct: 241 TGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNRE----MNKACGLFDRMPEKNVI 296
Query: 194 PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
T ++ L+ ++R +KPN + ++L AC
Sbjct: 297 SWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSAC 341
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 202 bits (514), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 167/294 (56%), Gaps = 4/294 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAIL- 71
K+F K W+A+L+G+ AI++F ++ ++P+ TF+S+L A
Sbjct: 449 KVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN 508
Query: 72 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
A + Q H + I+S L V+S L+ +Y+K G++ A +F ++KD++ W++
Sbjct: 509 ASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFK--RQREKDLVSWNS 566
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH- 190
+I+ Y +HG A+ +F EM + VK + VTF V AC+H GLV+EG F M++
Sbjct: 567 MISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDC 626
Query: 191 HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVA 250
I P +H +C++DL RAG+L+ A +I MP +W +L AC H+ ELG +A
Sbjct: 627 KIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLA 686
Query: 251 ARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
A ++PE++ Y+LL+N+YA G W++ KVR ++NE ++K P S +EV
Sbjct: 687 AEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEV 740
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 123/242 (50%), Gaps = 9/242 (3%)
Query: 2 YAKCNCGNLSYKMFMKTS-KKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
Y+KC + ++F + W A++SGF+ N EA+ LF +M + V+P+ T
Sbjct: 340 YSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFT 399
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
++ +L A +++ +H ++++ + V + L+D Y K G + A +F+ I
Sbjct: 400 YSVILTALPVIS----PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGID 455
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGL-VDE 179
DKDI+ WSA++A Y + G E A+ +F E+ + G+KPN+ TF+S+L+ C+ + +
Sbjct: 456 --DKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQ 513
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
G F +K + + + ++ + + G ++ A + + K + W +++
Sbjct: 514 GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK-DLVSWNSMISGYA 572
Query: 240 SH 241
H
Sbjct: 573 QH 574
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 145/321 (45%), Gaps = 43/321 (13%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y KC + +F KT K WN+++SG+ N L EA+ +F M + V+ ++
Sbjct: 238 LYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESS 297
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S++ A L +L+ +HC +++ GFL+ + + L+ YSKC ++ A +F I
Sbjct: 298 FASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIG 357
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTF---------------- 164
+++ W+A+I+ + ++ E AV LF+EM + GV+PN+ T+
Sbjct: 358 CVG-NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVH 416
Query: 165 ---------------TSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRA 209
T++L A +G V+E +F + I+ ++ ++ +
Sbjct: 417 AQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVA----WSAMLAGYAQT 472
Query: 210 GRLDDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYI 266
G + A + + IKPN + ++L C + N +G+ F ++ +
Sbjct: 473 GETEAAIKMFGELTKGGIKPNEFTFSSILNVCAA-TNASMGQGKQFHGFAIKSRLDSSLC 531
Query: 267 L---LANLYAAVGRWRDVEKV 284
+ L +YA G E+V
Sbjct: 532 VSSALLTMYAKKGNIESAEEV 552
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 110/227 (48%), Gaps = 3/227 (1%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
++ +F K+ + + ++L GF + +EA +LF + ++ D + F+S+L A
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
L D +HC I+ GFL + V + LVD Y K + +F+ +K+++++ W+
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFD--EMKERNVVTWT 163
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
+I+ Y ++ + ++LF M G +PN TF + L + G+ GL + ++K+
Sbjct: 164 TLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN 223
Query: 191 HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+ + +I+L + G + A L +K + W +++
Sbjct: 224 GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMISG 269
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 2/146 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAK + ++F + +K WN+++SG+ + A +A+ +FK+M V+ D T
Sbjct: 539 MYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVT 598
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLY-RLEVASILVDIYSKCGSLGYAHHIFNII 119
F + A +++ ++R + E S +VD+YS+ G L A + +
Sbjct: 599 FIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENM 658
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMA 145
P IW I+AA H E+
Sbjct: 659 P-NPAGSTIWRTILAACRVHKKTELG 683
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 202 bits (513), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 108/305 (35%), Positives = 169/305 (55%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAK C + K F ++ A W +++SG++ NS EA+ L+++M + P++ T
Sbjct: 366 MYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPT 425
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A + LA L+ +H + I+ GF + + S L +YSKCGSL + +F P
Sbjct: 426 MASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTP 485
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+KD++ W+A+I+ +G G+ A+ LF EM+ G++P+ VTF +++ ACSH G V+ G
Sbjct: 486 --NKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERG 543
Query: 181 LSLFQFMLKH-HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F M + P VDHY C++DLL RAG+L +A I + I +W LL AC
Sbjct: 544 WFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACK 603
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
+H ELG A L + Y+ L+ +Y A+GR RDVE+V + G+ K
Sbjct: 604 NHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGC 663
Query: 300 SLVEV 304
S +E+
Sbjct: 664 SWIEL 668
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 128/241 (53%), Gaps = 4/241 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC N + KMF + + + W+A+++G+ N + EA++LF +M ++P T
Sbjct: 265 MYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYT 324
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L A + + L++ +H +L++ GF L + LVD+Y+K G L A F+
Sbjct: 325 IVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDC-- 382
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
L+++D+ +W+++I+ Y ++ E A+ L+ M +G+ PN T SVL ACS + ++ G
Sbjct: 383 LQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELG 442
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ +KH V + + + + G L+D + R P K + W A++ +S
Sbjct: 443 KQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNK-DVVSWNAMISG-LS 500
Query: 241 H 241
H
Sbjct: 501 H 501
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 132/284 (46%), Gaps = 38/284 (13%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA- 59
MY K K+F ++ T W+ ++SG+ EAI++F L E + ++
Sbjct: 162 MYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSD 221
Query: 60 -TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
F ++L + A + IHC I++G L + +++ LV +YSKC SL A +F+
Sbjct: 222 YVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFD- 280
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
D++ I WSA++ Y ++G AV LF+ M +G+KP++ T VL+ACS + ++
Sbjct: 281 -SSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLE 339
Query: 179 EGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDA----------------------- 215
EG L F+LK + T ++D+ +AG L DA
Sbjct: 340 EGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYV 399
Query: 216 -----------YNLIRTMPIKPNHAVWGALLGACVSHENVELGE 248
Y ++T I PN ++L AC S +ELG+
Sbjct: 400 QNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGK 443
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 14/236 (5%)
Query: 53 DVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYA 112
++ P +T L ++ +L +H +IR+G ++ A++LV+ Y+KCG L A
Sbjct: 9 ELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKA 68
Query: 113 HHIFNIIPLKDKDIIIWSAIIAAYGKHG---HGEMAVSLFNEMVQSGVKPNQVTFTSVLH 169
H IFN I KD++ W+++I Y ++G + LF EM + PN T +
Sbjct: 69 HSIFNAIIC--KDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 170 ACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHA 229
A S + G ++K + T ++ + +AG ++D + MP + N
Sbjct: 127 AESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP-ERNTY 185
Query: 230 VWGALLGACVSHENVELG-EVAARWTFELEPENTGNYI-------LLANLYAAVGR 277
W ++ + VE +V + E E + +Y+ L A +Y +GR
Sbjct: 186 TWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGR 241
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 118/258 (45%), Gaps = 11/258 (4%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHN---SLAREAIQLFKQMLVEDVQPDN 58
YAKC ++ +F K WN++++G+ N S + +QLF++M +D+ P+
Sbjct: 59 YAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNA 118
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
T + A + L H +++ + V + LV +Y K G + +F
Sbjct: 119 YTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAY 178
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMV---QSGVKPNQVTFTSVLHACSHVG 175
+P +++ WS +++ Y G E A+ +FN + + G + V FT+VL + +
Sbjct: 179 MP--ERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATI 235
Query: 176 LVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
V G + +K+ ++ V ++ + + L++A + + + N W A++
Sbjct: 236 YVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDR-NSITWSAMV 294
Query: 236 -GACVSHENVELGEVAAR 252
G + E++E ++ +R
Sbjct: 295 TGYSQNGESLEAVKLFSR 312
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 202 bits (513), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 106/305 (34%), Positives = 170/305 (55%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + ++F T + ++ + + EA+ LF +M ++V P+ T
Sbjct: 281 MYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYT 340
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F LL + A L+ LKQ +H +++SG+ + V + LV++Y+K GS+ A F+ +
Sbjct: 341 FAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMT 400
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+D I+ W+ +I+ HG G A+ F+ M+ +G PN++TF VL ACSH+G V++G
Sbjct: 401 FRD--IVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQG 458
Query: 181 LSLF-QFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
L F Q M K + P + HYTCI+ LL +AG DA + +RT PI+ + W LL AC
Sbjct: 459 LHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACY 518
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
N LG+ A + E P ++G Y+LL+N++A W V KVR ++N G++K P
Sbjct: 519 VRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGV 578
Query: 300 SLVEV 304
S + +
Sbjct: 579 SWIGI 583
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 129/266 (48%), Gaps = 14/266 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+ C+ + ++ + +++ LSG++ +E + + ++ ED +N T
Sbjct: 180 MYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLT 239
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ S L ++ L DL A+ +H ++R GF +E L+++Y KCG + YA +F+
Sbjct: 240 YLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFD--D 297
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++I + + I+ AY + E A++LF++M V PN+ TF +L++ + + L+ +G
Sbjct: 298 THAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQG 357
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
L +LK V ++++ ++G ++DA M + + W ++ C
Sbjct: 358 DLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSH 416
Query: 241 H----ENVE-------LGEVAARWTF 255
H E +E GE+ R TF
Sbjct: 417 HGLGREALEAFDRMIFTGEIPNRITF 442
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/213 (18%), Positives = 96/213 (45%), Gaps = 3/213 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNA 59
+Y KC + K+F ++ W A++ G+ ++ E ++LFK M + +P+
Sbjct: 78 LYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEF 137
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
+ + + +++ H ++ G + V + LV +YS C G A + + +
Sbjct: 138 VATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDL 197
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
P D+ ++S+ ++ Y + G + + + + N +T+ S L S++ ++
Sbjct: 198 PY--CDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNL 255
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRL 212
L + M++ V+ +I++ G+ G++
Sbjct: 256 ALQVHSRMVRFGFNAEVEACGALINMYGKCGKV 288
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 201 bits (511), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 108/286 (37%), Positives = 165/286 (57%), Gaps = 3/286 (1%)
Query: 20 KKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMN 79
K W +V+ G ++++ F+QM V ++ T +L A L L
Sbjct: 396 KANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGRE 455
Query: 80 IHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKH 139
IH ++IR+ + V + LV++Y+KCG L +F I +DKD+I W++II YG H
Sbjct: 456 IHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAI--RDKDLISWNSIIKGYGMH 513
Query: 140 GHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH-IIPLVDH 198
G E A+S+F+ M+ SG P+ + +VL ACSH GLV++G +F M K + P +H
Sbjct: 514 GFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEH 573
Query: 199 YTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELE 258
Y CI+DLLGR G L +A +++ MP++P V GALL +C H+NV++ E A LE
Sbjct: 574 YACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLE 633
Query: 259 PENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
PE TG+Y+LL+N+Y+A GRW + VR + + L+K+ S +EV
Sbjct: 634 PERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEV 679
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 110/244 (45%), Gaps = 41/244 (16%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y K +Y +F++ + WN ++ GF A+++F+ M E+ +PD T
Sbjct: 202 LYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVT 261
Query: 61 FNSLLPA--------------------------------YAILADLKQ---AMNIHCYLI 85
+ S+L +++ A+L+ A +H Y+I
Sbjct: 262 WTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVI 321
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+ GF L + L+ +Y K G + A H+F I ++K I W+++I ++ G + A
Sbjct: 322 KGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQI--RNKGIESWNSLITSFVDAGKLDEA 379
Query: 146 VSLFNEMVQ----SGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTC 201
+SLF+E+ + VK N VT+TSV+ C+ G D+ L F+ M ++ C
Sbjct: 380 LSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICC 439
Query: 202 IIDL 205
I+ +
Sbjct: 440 ILSI 443
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 105/219 (47%), Gaps = 18/219 (8%)
Query: 75 KQAMNIHCYLIRSGFLYRL-EVASILVDIYSKCGSLGYAHHIFNIIPLKD-KDIIIWSAI 132
+Q +H ++ S F++R +A+ L+ +Y++ G L A ++F + L D+ +W++I
Sbjct: 70 QQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSI 129
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL------SLFQF 186
+ A HG E A+ L+ M Q G+ + +L AC ++G GL + Q
Sbjct: 130 LKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRF--GLCRAFHTQVIQI 187
Query: 187 MLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVEL 246
LK ++ + + ++ L +AGR+ DAYNL MP++ N W ++ + E
Sbjct: 188 GLKENLHVVNE----LLTLYPKAGRMGDAYNLFVEMPVR-NRMSWNVMIKGFSQEYDCES 242
Query: 247 GEVAARW--TFELEPENTGNYILLANLYAAVGRWRDVEK 283
W E +P+ + + + ++ G++ DV K
Sbjct: 243 AVKIFEWMQREEFKPDEV-TWTSVLSCHSQCGKFEDVLK 280
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 200 bits (509), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 179/318 (56%), Gaps = 17/318 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y C C +L+ K+F + ++ WN+++ + A+QLF++M +PD T
Sbjct: 195 LYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ-RSFEPDGYT 253
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRS---GFLYRLEVASILVDIYSKCGSLGYAHHIFN 117
S+L A A L L H +L+R + V + L+++Y KCGSL A +F
Sbjct: 254 MQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQ 313
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMV--QSGVKPNQVTFTSVLHACSHVG 175
++ +D+ W+A+I + HG E A++ F+ MV + V+PN VTF +L AC+H G
Sbjct: 314 --GMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRG 371
Query: 176 LVDEGLSLFQFMLKHHII-PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGAL 234
V++G F M++ + I P ++HY CI+DL+ RAG + +A +++ +MP+KP+ +W +L
Sbjct: 372 FVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSL 431
Query: 235 LGACVSH-ENVELGEVAARWTFELEPEN-------TGNYILLANLYAAVGRWRDVEKVRD 286
L AC +VEL E AR + +N +G Y+LL+ +YA+ RW DV VR
Sbjct: 432 LDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRK 491
Query: 287 MVNEVGLRKLPAQSLVEV 304
+++E G+RK P S +E+
Sbjct: 492 LMSEHGIRKEPGCSSIEI 509
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 119/242 (49%), Gaps = 9/242 (3%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHN-SLAREAIQLFKQMLVE-DVQPDNATFNSLLP 66
N ++++F + WN ++ H+ S EA L+++ML + PD TF +L
Sbjct: 100 NYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLK 159
Query: 67 AYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDI 126
A A + + +HC +++ GF + V + L+ +Y CG L A +F+ +P ++ +
Sbjct: 160 ACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMP--ERSL 217
Query: 127 IIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQF 186
+ W+++I A + G + A+ LF EM Q +P+ T SVL AC+ +G + G F
Sbjct: 218 VSWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAF 276
Query: 187 MLKHHIIPL---VDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHEN 243
+L+ + + V +I++ + G L A + + M K + A W A++ +H
Sbjct: 277 LLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQ-KRDLASWNAMILGFATHGR 335
Query: 244 VE 245
E
Sbjct: 336 AE 337
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 200 bits (509), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 179/304 (58%), Gaps = 3/304 (0%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
+AKC + + +F + ++ WN+++SGF+ N ++A+ +F++M +DV+PD T
Sbjct: 202 FAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTM 261
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
SLL A A L +Q IH Y++R+ F V + L+D+Y KCG + ++F P
Sbjct: 262 VSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAP- 320
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
K + W+++I +G E A+ LF+E+ +SG++P+ V+F VL AC+H G V
Sbjct: 321 -KKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRAD 379
Query: 182 SLFQFMLKHHII-PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
F+ M + ++I P + HYT ++++LG AG L++A LI+ MP++ + +W +LL AC
Sbjct: 380 EFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRK 439
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
NVE+ + AA+ +L+P+ T Y+LL+N YA+ G + + + R ++ E + K S
Sbjct: 440 IGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCS 499
Query: 301 LVEV 304
+EV
Sbjct: 500 SIEV 503
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 124/260 (47%), Gaps = 36/260 (13%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE--DVQPDNATFNSLLP 66
N +Y +F + + K WN ++ GF +S AI +F ML V+P T+ S+
Sbjct: 75 NYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFK 134
Query: 67 AYAILADLKQAMNIHCYLIRSGF----------------------LYRLEVASILVDI-- 102
AY L + +H +I+ G +R+ + I D+
Sbjct: 135 AYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVA 194
Query: 103 -------YSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS 155
++KCG + A ++F+ +P ++ + W+++I+ + ++G + A+ +F EM +
Sbjct: 195 WNSMIMGFAKCGLIDQAQNLFDEMPQRNG--VSWNSMISGFVRNGRFKDALDMFREMQEK 252
Query: 156 GVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDA 215
VKP+ T S+L+AC+++G ++G + ++++++ T +ID+ + G +++
Sbjct: 253 DVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEG 312
Query: 216 YNLIRTMPIKPNHAVWGALL 235
N+ P K + W +++
Sbjct: 313 LNVFECAP-KKQLSCWNSMI 331
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 77/147 (52%), Gaps = 4/147 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC C +F KK+ + WN+++ G +N A+ LF ++ ++PD+ +
Sbjct: 302 MYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVS 361
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVA--SILVDIYSKCGSLGYAHHIFNI 118
F +L A A ++ +A L++ ++ + +++V++ G L A +
Sbjct: 362 FIGVLTACAHSGEVHRADEFF-RLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKN 420
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+P+ ++D +IWS++++A K G+ EMA
Sbjct: 421 MPV-EEDTVIWSSLLSACRKIGNVEMA 446
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 200 bits (508), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/295 (35%), Positives = 166/295 (56%), Gaps = 5/295 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNATFNSLLPAYAIL 71
++F ++ WN ++ G+ N E + FK+M+ E V P++AT +L A A L
Sbjct: 142 RVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKL 201
Query: 72 ADLKQAMNIHCYLIRSGF-LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
+H Y G+ + V + L+D+Y KCG++ A +F I K +D+I W+
Sbjct: 202 GAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGI--KRRDLISWN 259
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
+I HGHG A++LF+EM SG+ P++VTF VL AC H+GLV++GL+ F M
Sbjct: 260 TMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTD 319
Query: 191 -HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEV 249
I+P ++H C++DLL RAG L A I MP+K + +W LLGA ++ V++GEV
Sbjct: 320 FSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEV 379
Query: 250 AARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
A +LEP N N+++L+N+Y GR+ D +++ + + G +K S +E
Sbjct: 380 ALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIET 434
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 5/150 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC ++ ++F ++ WN +++G + EA+ LF +M + PD T
Sbjct: 233 MYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVT 292
Query: 61 FNSLLPAYAILADLKQAMN-IHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F +L A + ++ + + + +E +VD+ S+ G L A N +
Sbjct: 293 FVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKM 352
Query: 120 PLKDKDIIIWSAIIAA---YGKHGHGEMAV 146
P+K D +IW+ ++ A Y K GE+A+
Sbjct: 353 PVK-ADAVIWATLLGASKVYKKVDIGEVAL 381
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 172/302 (56%), Gaps = 11/302 (3%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
++ +F K K W ++SG + N L EA L M+ ++P N+T++ LL +
Sbjct: 419 AFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGA 478
Query: 71 LADLKQAMNIHCYLIRSGFLYR--LEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIII 128
++L Q +IHC + ++ Y L + + LV +Y+KCG++ A+ IF + KD +
Sbjct: 479 TSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIF--AKMVQKDTVS 536
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML 188
W+++I HG + A++LF EM+ SG KPN VTF VL ACSH GL+ GL LF+ M
Sbjct: 537 WNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMK 596
Query: 189 K-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC----VSHEN 243
+ + I P +DHY +IDLLGRAG+L +A I +P P+H V+GALLG C +
Sbjct: 597 ETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDA 656
Query: 244 VELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEK-VRDMVNEVGLRKLPAQSLV 302
+ E AA EL+P N ++ L N+YA +GR D+EK +R + G++K P S V
Sbjct: 657 EGIAERAAMRLLELDPVNAPGHVALCNVYAGLGR-HDMEKEMRKEMGIKGVKKTPGCSWV 715
Query: 303 EV 304
V
Sbjct: 716 VV 717
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 144/303 (47%), Gaps = 34/303 (11%)
Query: 1 MYAKCNCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQML--VEDVQP 56
+Y C G++ +Y++F + ++ W A++SGF N L REA+ LF +M V+ V P
Sbjct: 238 VYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSP 297
Query: 57 DNATFNSLLPAYAILA-DLKQ-AMNIHCYLIRSGFL---YRLEVASILVDIYSKCGSLGY 111
+ T SL A L + ++ +H +I +G+ + +A LV +Y+ G +
Sbjct: 298 NGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIAS 357
Query: 112 AHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHAC 171
A + N + D+ + II Y K+G E A +LF E V+S ++V++TS++
Sbjct: 358 AQSLLN----ESFDLQSCNIIINRYLKNGDLERAETLF-ERVKS--LHDKVSWTSMIDGY 410
Query: 172 SHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM---PIKPNH 228
G V LFQ + + +T +I L + +A +L+ M +KP +
Sbjct: 411 LEAGDVSRAFGLFQKLHDKDGVT----WTVMISGLVQNELFAEAASLLSDMVRCGLKPLN 466
Query: 229 AVWGALLGACVSHENVELGE----VAARWTFELEPENTGNYIL---LANLYAAVGRWRDV 281
+ + LL + + N++ G+ V A+ T +P+ IL L ++YA G D
Sbjct: 467 STYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPD----LILQNSLVSMYAKCGAIEDA 522
Query: 282 EKV 284
++
Sbjct: 523 YEI 525
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 10/142 (7%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC +Y++F K +K T WN+++ G H+ LA +A+ LFK+ML +P++ T
Sbjct: 512 MYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVT 571
Query: 61 FNSLLPAYAILADLKQAMNI-----HCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 115
F +L A + + + + + Y I+ G + + ++D+ + G L A
Sbjct: 572 FLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYIS----MIDLLGRAGKLKEAEEF 627
Query: 116 FNIIPLKDKDIIIWSAIIAAYG 137
+ +P D ++ A++ G
Sbjct: 628 ISALPFT-PDHTVYGALLGLCG 648
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 81/168 (48%), Gaps = 16/168 (9%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
++F + ++ WN +++G I N +A Q+F M DV ++N+++ Y
Sbjct: 159 ELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDV----VSWNAMIKGYIEND 214
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKC--GSLGYAHHIFNIIPLKDKDIIIWS 130
+++A + G + V + +Y C G + A+ +F +P +++I+ W+
Sbjct: 215 GMEEAKLLF------GDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMP--ERNIVSWT 266
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQ--SGVKPNQVTFTSVLHACSHVGL 176
A+I+ + + A+ LF EM + V PN T S+ +AC +G+
Sbjct: 267 AMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGV 314
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 199 bits (505), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/300 (35%), Positives = 174/300 (58%), Gaps = 11/300 (3%)
Query: 10 LSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYA 69
++ K+F + + WN ++ F H L +A+ ++K+M E V D+ T +LL + A
Sbjct: 160 IASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCA 219
Query: 70 ILADLKQAMNIHCYLIRSGFLYRLE----VASILVDIYSKCGSLGYAHHIFNIIPLKDKD 125
++ L + +H R R E V++ L+D+Y+KCGSL A +FN ++ +D
Sbjct: 220 HVSALNMGVMLH----RIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFN--GMRKRD 273
Query: 126 IIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQ 185
++ W+++I YG HGHG A+S F +MV SGV+PN +TF +L CSH GLV EG+ F+
Sbjct: 274 VLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFE 333
Query: 186 FMLKH-HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENV 244
M H+ P V HY C++DL GRAG+L+++ +I + +W LLG+C H N+
Sbjct: 334 IMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNL 393
Query: 245 ELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
ELGEVA + +LE N G+Y+L+ ++Y+A + +R ++ L+ +P S +E+
Sbjct: 394 ELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEI 453
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 111/218 (50%), Gaps = 4/218 (1%)
Query: 19 SKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDV-QPDNATFNSLLPAYAILADLKQA 77
S T+ WN ++ GF ++S +I + +ML+ V +PD TFN L + + + +
Sbjct: 67 SDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKC 126
Query: 78 MNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYG 137
+ IH +IRSGFL VA+ LV YS GS+ A +F+ +P+ +D++ W+ +I +
Sbjct: 127 LEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPV--RDLVSWNVMICCFS 184
Query: 138 KHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVD 197
G A+S++ M GV + T ++L +C+HV ++ G+ L + V
Sbjct: 185 HVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVF 244
Query: 198 HYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ID+ + G L++A + M K + W +++
Sbjct: 245 VSNALIDMYAKCGSLENAIGVFNGMR-KRDVLTWNSMI 281
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 199 bits (505), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 179/307 (58%), Gaps = 6/307 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YAK + K F + + WNA++SGF N + EA+++F E + P+ T
Sbjct: 416 LYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYT 474
Query: 61 FNSLLPAYAILADL--KQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
F S+L A A D+ KQ H +L++ G V+S L+D+Y+K G++ + +FN
Sbjct: 475 FGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFN- 533
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
+ K+ +W++II+AY HG E ++LF++M++ V P+ VTF SVL AC+ G+VD
Sbjct: 534 -EMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVD 592
Query: 179 EGLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+G +F M++ +++ P +HY+C++D+LGRAGRL +A L+ +P P ++ ++LG+
Sbjct: 593 KGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGS 652
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
C H NV++G A E++PE +G+Y+ + N+YA W ++R + + + K
Sbjct: 653 CRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEA 712
Query: 298 AQSLVEV 304
S ++V
Sbjct: 713 GFSWIDV 719
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 144/305 (47%), Gaps = 15/305 (4%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHN-SLAREAIQLFKQMLVEDVQPDNA 59
MY++ + ++F + S K WN++LSG + EA+ +F+ M+ E V+ D+
Sbjct: 218 MYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHV 277
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
+F S++ DLK A IH I+ G+ LEV +IL+ YSKCG L +F+
Sbjct: 278 SFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFH-- 335
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+ +++++ W+ +I++ + + AVS+F M GV PN+VTF +++A + E
Sbjct: 336 QMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKE 390
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
GL + +K + I L + L+DA + + + W A++
Sbjct: 391 GLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIIS-WNAMISGFA 449
Query: 240 ----SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRK 295
SHE +++ AA T + E T +L A +A + ++ + ++GL
Sbjct: 450 QNGFSHEALKMFLSAAAET--MPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNS 507
Query: 296 LPAQS 300
P S
Sbjct: 508 CPVVS 512
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 6/150 (4%)
Query: 25 PWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYL 84
WN +LSGF N + A+ +M V D T+++ L + + +
Sbjct: 144 SWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTV 200
Query: 85 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHG-HGE 143
+++G L V + + +YS+ GS A +F+ + KD+I W+++++ + G G
Sbjct: 201 VKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSF--KDMISWNSLLSGLSQEGTFGF 258
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSH 173
AV +F +M++ GV+ + V+FTSV+ C H
Sbjct: 259 EAVVIFRDMMREGVELDHVSFTSVITTCCH 288
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 14/233 (6%)
Query: 10 LSYKMFMKTSKKR--TAPWNAVLSGFIHNSLAREAIQLFK---QMLVEDVQPDNATFNSL 64
+++K+F +S++ T+ +++ NS AR A+ +FK Q+ D T
Sbjct: 26 IAHKLFDGSSQRNATTSINHSISESLRRNSPAR-ALSIFKENLQLGYFGRHMDEVTL--C 82
Query: 65 LPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDK 124
L A DLK+ IH + SGF + V++ ++ +Y K G A IF L D
Sbjct: 83 LALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFE--NLVDP 140
Query: 125 DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLF 184
D++ W+ I++ + + ++A++ M +GV + T+++ L C GL L
Sbjct: 141 DVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQ 197
Query: 185 QFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
++K + + I + R+G A + M K + W +LL
Sbjct: 198 STVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFK-DMISWNSLLSG 249
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 198 bits (504), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 104/309 (33%), Positives = 174/309 (56%), Gaps = 9/309 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y C + + K+F + +++ WN++++ + N + F +M+ + PD T
Sbjct: 157 LYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETT 216
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
LL A +L +H ++ + + LVD+Y+K G L YA +F
Sbjct: 217 MVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFE--R 272
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMV-QSGVKPNQVTFTSVLHACSHVGLVDE 179
+ DK++ WSA+I ++G E A+ LF++M+ +S V+PN VTF VL ACSH GLVD+
Sbjct: 273 MVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDD 332
Query: 180 GLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G F M K H I P++ HY ++D+LGRAGRL++AY+ I+ MP +P+ VW LL AC
Sbjct: 333 GYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSAC 392
Query: 239 VSHENVE---LGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRK 295
H + + +GE + ELEP+ +GN +++AN +A W + +VR ++ E ++K
Sbjct: 393 SIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKK 452
Query: 296 LPAQSLVEV 304
+ +S +E+
Sbjct: 453 IAGESCLEL 461
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 102/222 (45%), Gaps = 5/222 (2%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+ + +S + WN + G+ + E+I ++ +M ++P+ TF LL A A
Sbjct: 69 LLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLG 128
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
L I +++ GF + + V + L+ +Y C A +F+ + +++++ W++I+
Sbjct: 129 LTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFD--EMTERNVVSWNSIM 186
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII 193
A ++G + F EM+ P++ T +L AC G + G + ++ +
Sbjct: 187 TALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELE 244
Query: 194 PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
T ++D+ ++G L+ A + M + N W A++
Sbjct: 245 LNCRLGTALVDMYAKSGGLEYARLVFERM-VDKNVWTWSAMI 285
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 198 bits (504), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 106/270 (39%), Positives = 152/270 (56%), Gaps = 7/270 (2%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
WN+++SG+ + REAI+LF +M+ ++PDN S L A A D ++ IH Y
Sbjct: 217 WNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTK 276
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
R +A+ LVD Y+KCG + A IF + DK + W+A+I HG+GE+
Sbjct: 277 RKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCS--DKTLFTWNAMITGLAMHGNGELT 334
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK-HHIIPLVDHYTCIID 204
V F +MV SG+KP+ VTF SVL CSH GLVDE +LF M + + + HY C+ D
Sbjct: 335 VDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMAD 394
Query: 205 LLGRAGRLDDAYNLIRTMPI----KPNHAVWGALLGACVSHENVELGEVAARWTFELEPE 260
LLGRAG +++A +I MP + W LLG C H N+E+ E AA L PE
Sbjct: 395 LLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPE 454
Query: 261 NTGNYILLANLYAAVGRWRDVEKVRDMVNE 290
+ G Y ++ +YA RW +V KVR++++
Sbjct: 455 DGGVYKVMVEMYANAERWEEVVKVREIIDR 484
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 102/246 (41%), Gaps = 36/246 (14%)
Query: 34 IHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAIL--ADLKQAMNIHCYLIRSGFLY 91
+H + + + F +M V PD TF + A A DL +HC +R G L
Sbjct: 91 LHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLS 150
Query: 92 RLEVASILVDIYSKCGSLGYAHHIFNIIPLKD---------------------------- 123
L + L+ +YS + A +F+ P +D
Sbjct: 151 DLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMP 210
Query: 124 -KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLS 182
+D++ W+++I+ Y + H A+ LF+EMV G+KP+ V S L AC+ G +G +
Sbjct: 211 LRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKA 270
Query: 183 LFQFMLKHHIIPLVDHY--TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ + + + +D + T ++D + G +D A + K W A++
Sbjct: 271 IHDYTKRKRL--FIDSFLATGLVDFYAKCGFIDTAMEIFELCSDK-TLFTWNAMITGLAM 327
Query: 241 HENVEL 246
H N EL
Sbjct: 328 HGNGEL 333
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 198 bits (503), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 161/288 (55%), Gaps = 2/288 (0%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F + + + A+ G++ A + +F++M D+ SLL A L
Sbjct: 190 KLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLG 249
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
LK ++H + IR L + + + D+Y KC L YAH +F + + +D+I WS++
Sbjct: 250 ALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVF--VNMSRRDVISWSSL 307
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
I YG G M+ LF+EM++ G++PN VTF VL AC+H GLV++ F+ M +++I
Sbjct: 308 ILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNI 367
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAAR 252
+P + HY + D + RAG L++A + MP+KP+ AV GA+L C + NVE+GE AR
Sbjct: 368 VPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVAR 427
Query: 253 WTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
+L+P Y+ LA LY+A GR+ + E +R + E + K+P S
Sbjct: 428 ELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCS 475
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 109/226 (48%), Gaps = 4/226 (1%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNATFNSLLPAYA 69
S +F + WN ++ F + A ++I LF +M E V+PD+ T +L A +
Sbjct: 86 SLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACS 145
Query: 70 ILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIW 129
+ K IH ++ GF L V+S LV +Y G L +A +F+ +P++D +++
Sbjct: 146 ASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDS--VLY 203
Query: 130 SAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK 189
+A+ Y + G + +++F EM SG + V S+L AC +G + G S+ + ++
Sbjct: 204 TAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIR 263
Query: 190 HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
++ I D+ + LD A+ + M + + W +L+
Sbjct: 264 RCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMS-RRDVISWSSLI 308
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 26/204 (12%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC+ + ++ +F+ S++ W++++ G+ + + +LF +ML E ++P+ T
Sbjct: 279 MYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVT 338
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLY-----------RLEVASILVDIYSKCGSL 109
F +L A A H L+ +LY L+ + + D S+ G L
Sbjct: 339 FLGVLSACA-----------HGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLL 387
Query: 110 GYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLH 169
A +P+K + ++ A+++ +G+ E+ + E++Q +KP + ++ L
Sbjct: 388 EEAEKFLEDMPVKPDEAVM-GAVLSGCKVYGNVEVGERVARELIQ--LKPRKASYYVTLA 444
Query: 170 AC-SHVGLVDEGLSLFQFMLKHHI 192
S G DE SL Q+M + I
Sbjct: 445 GLYSAAGRFDEAESLRQWMKEKQI 468
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 197 bits (502), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 111/308 (36%), Positives = 173/308 (56%), Gaps = 9/308 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSK--KRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
MY K G LS F+ S K WNA L+ + + A++ F +M + VQ D+
Sbjct: 153 MYMKF--GELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDS 210
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
T S+L A L L+ I+ + + V + +D++ KCG+ A +F
Sbjct: 211 FTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFE- 269
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
+K ++++ WS +I Y +G A++LF M G++PN VTF VL ACSH GLV+
Sbjct: 270 -EMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVN 328
Query: 179 EGLSLFQFMLK---HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
EG F M++ ++ P +HY C++DLLGR+G L++AY I+ MP++P+ +WGALL
Sbjct: 329 EGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALL 388
Query: 236 GACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRK 295
GAC H ++ LG+ A E P+ ++LL+N+YAA G+W V+KVR + ++G +K
Sbjct: 389 GACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKK 448
Query: 296 LPAQSLVE 303
+ A S VE
Sbjct: 449 VAAYSSVE 456
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 113/230 (49%), Gaps = 5/230 (2%)
Query: 8 GNLSY--KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLL 65
G++ Y ++F + K R WN + G++ N L E++ L+K+M V+PD T+ ++
Sbjct: 57 GDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVV 116
Query: 66 PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKD 125
A + L D +H ++++ GF VA+ LV +Y K G L A +F ++ KD
Sbjct: 117 KAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFE--SMQVKD 174
Query: 126 IIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQ 185
++ W+A +A + G+ +A+ FN+M V+ + T S+L AC +G ++ G ++
Sbjct: 175 LVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYD 234
Query: 186 FMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
K I + +D+ + G + A L M + N W ++
Sbjct: 235 RARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMK-QRNVVSWSTMI 283
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 3/169 (1%)
Query: 75 KQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIA 134
KQ IH ++R+GF + + + L++ G + YA +F+ + I +W+ +
Sbjct: 25 KQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFD--EMHKPRIFLWNTLFK 82
Query: 135 AYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIP 194
Y ++ ++ L+ +M GV+P++ T+ V+ A S +G G +L ++K+
Sbjct: 83 GYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGC 142
Query: 195 LVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHEN 243
L T ++ + + G L A L +M +K + W A L CV N
Sbjct: 143 LGIVATELVMMYMKFGELSSAEFLFESMQVK-DLVAWNAFLAVCVQTGN 190
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 197 bits (502), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 180/310 (58%), Gaps = 8/310 (2%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-----VQP 56
YAK + + K+F + ++ W+ +++G++ +EA+ LF++M + V+P
Sbjct: 138 YAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRP 197
Query: 57 DNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 116
+ T +++L A L L+Q +H Y+ + + + + L+D+Y+KCGSL A +F
Sbjct: 198 NEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVF 257
Query: 117 NIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS-GVKPNQVTFTSVLHACSHVG 175
N + K KD+ +SA+I +G + LF+EM S + PN VTF +L AC H G
Sbjct: 258 NALGSK-KDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRG 316
Query: 176 LVDEGLSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGAL 234
L++EG S F+ M++ I P + HY C++DL GR+G + +A + I +MP++P+ +WG+L
Sbjct: 317 LINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSL 376
Query: 235 LGACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLR 294
L +++ E A + EL+P N+G Y+LL+N+YA GRW +V+ +R + G+
Sbjct: 377 LSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGIN 436
Query: 295 KLPAQSLVEV 304
K+P S VEV
Sbjct: 437 KVPGCSYVEV 446
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 37/247 (14%)
Query: 26 WNAVLSGFIHNSLARE---AIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHC 82
WN ++ +HN + + I ++ +M V PD TF LLP++ L H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 83 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD------------------- 123
++ G V + L+++YS CG L A +F+ KD
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 124 ----------KDIIIWSAIIAAYGKHGHGEMAVSLFNEMV-----QSGVKPNQVTFTSVL 168
+++I WS +I Y G + A+ LF EM ++ V+PN+ T ++VL
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 169 HACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNH 228
AC +G +++G + ++ K+H+ + T +ID+ + G L+ A + + K +
Sbjct: 207 SACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDV 266
Query: 229 AVWGALL 235
+ A++
Sbjct: 267 KAYSAMI 273
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 173/292 (59%), Gaps = 1/292 (0%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQML-VEDVQPDNATFNSLLPAYAILA 72
+F + S++ W++++ G++ +A+++F QM+ + + + T S++ A A L
Sbjct: 196 VFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLG 255
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
L + +H Y++ + + + L+D+Y+KCGS+G A +F +K+ D ++W+AI
Sbjct: 256 ALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAI 315
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
I HG ++ LF++M +S + P+++TF +L ACSH GLV E F+ + +
Sbjct: 316 IGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGA 375
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAAR 252
P +HY C++D+L RAG + DA++ I MPIKP ++ GALL C++H N+EL E +
Sbjct: 376 EPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGK 435
Query: 253 WTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
EL+P N G Y+ LAN+YA ++R +R+ + + G++K+ S++++
Sbjct: 436 KLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDL 487
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 133/264 (50%), Gaps = 31/264 (11%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
+ +YK K S WN V+ GF ++ ++I ++ QML + PD+ T+ L+ +
Sbjct: 59 DYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSS 118
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP-------- 120
+ L++ K ++HC +++SG + L + + L+ +Y A +F+ +P
Sbjct: 119 SRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWN 178
Query: 121 ---------------------LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG-VK 158
+ ++D++ WS++I Y K G A+ +F++M++ G K
Sbjct: 179 SILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSK 238
Query: 159 PNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNL 218
N+VT SV+ AC+H+G ++ G ++ +++L H+ V T +ID+ + G + DA+++
Sbjct: 239 ANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSV 298
Query: 219 IRTMPIKPNHAV-WGALLGACVSH 241
+K A+ W A++G SH
Sbjct: 299 FYRASVKETDALMWNAIIGGLASH 322
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 3/156 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAP--WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
MYAKC ++ +F + S K T WNA++ G + RE++QLF +M + PD
Sbjct: 285 MYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDE 344
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
TF LL A + +K+A + L SG + E + +VD+ S+ G + AH +
Sbjct: 345 ITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISE 404
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ 154
+P+K ++ A++ HG+ E+A ++ ++++
Sbjct: 405 MPIKPTGSML-GALLNGCINHGNLELAETVGKKLIE 439
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 165/294 (56%), Gaps = 4/294 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQM-LVEDVQPDNA 59
MY+K + +F + + WN+V+SG + + A A ++F QM L + PD
Sbjct: 391 MYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAI 450
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T SLL + L L +H Y +R+ F V + L+D+Y+KCG+ A +F I
Sbjct: 451 TIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSI 510
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
K W+++I+ Y G A+S + EM + G+KP+++TF VL AC+H G VDE
Sbjct: 511 --KAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDE 568
Query: 180 GLSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G F+ M+K I P + HY ++ LLGRA +A LI M IKP+ AVWGALL AC
Sbjct: 569 GKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSAC 628
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVG 292
+ H +E+GE AR F L+ +N G Y+L++NLYA W DV +VR+M+ + G
Sbjct: 629 IIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNG 682
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 85/170 (50%), Gaps = 2/170 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y K C + +F + ++ T WNA++ G+ N +A +LF ML + P T
Sbjct: 94 LYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATT 153
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+LLP + Q ++H +SG +V + L+ YSKC LG A +F
Sbjct: 154 LVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFR--E 211
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHA 170
+KDK + W+ +I AY + G E A+++F M + V+ + VT ++L A
Sbjct: 212 MKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 261
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 133/321 (41%), Gaps = 48/321 (14%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y+KC + +F + K T WN ++ + + L EAI +FK M ++V+ T
Sbjct: 196 YSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTI 255
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+LL A+ L HC +++ G + + V + LV YS+CG L A ++
Sbjct: 256 INLLSAHVSHEPL------HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLY--ASA 307
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
K I+ ++I++ Y + G ++AV F++ Q +K + V +LH C +D G+
Sbjct: 308 KQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGM 367
Query: 182 SLFQFMLKHHI--------------------------------IPLVDHYTCIIDLLGRA 209
SL + +K + PL+ + +I ++
Sbjct: 368 SLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLIS-WNSVISGCVQS 426
Query: 210 GRLDDAYNLIRTMPIK----PNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNY 265
GR A+ + M + P+ +LL C + LG+ +T EN N+
Sbjct: 427 GRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENE-NF 485
Query: 266 ILLA--NLYAAVGRWRDVEKV 284
+ A ++YA G E V
Sbjct: 486 VCTALIDMYAKCGNEVQAESV 506
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 100/214 (46%), Gaps = 5/214 (2%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI-LADLK-QAMNIHCY 83
++++L IH ++ I +F+ +L + P++ T + L A K Q + +
Sbjct: 16 FHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTH 75
Query: 84 LIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGE 143
L +SG + V + L+++Y K G + A +F+ +P ++D ++W+A+I Y ++G+
Sbjct: 76 LTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMP--ERDTVVWNALICGYSRNGYEC 133
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
A LF M+Q G P+ T ++L C G V +G S+ K + +I
Sbjct: 134 DAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALI 193
Query: 204 DLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+ L A L R M K + W ++GA
Sbjct: 194 SFYSKCAELGSAEVLFREMKDKSTVS-WNTMIGA 226
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/286 (36%), Positives = 164/286 (57%), Gaps = 4/286 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAK N + + + F + WNA++ GF N REA++LF QML+E++QPD T
Sbjct: 285 MYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELT 344
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S+L + A + + + + + + G L VA+ L+ YS+ G+L A F+ I
Sbjct: 345 FASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSI- 403
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++ D++ W+++I A HG E ++ +F M+Q ++P+++TF VL ACSH GLV EG
Sbjct: 404 -REPDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEG 461
Query: 181 LSLFQFMLKHHIIPLVD-HYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
L F+ M + + I D HYTC+IDLLGRAG +D+A +++ +MP +P+ A G C
Sbjct: 462 LRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCN 521
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVR 285
HE E + A+ E+EP NY +L+N Y + G W +R
Sbjct: 522 IHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLR 567
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 121/246 (49%), Gaps = 15/246 (6%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED--VQPDN 58
Y KC + ++F + WNA++S ++ N + EA L K M + + D
Sbjct: 186 FYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDY 245
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
TF+SLL A I +Q IH L + + + + VA+ L+++Y+K L A F
Sbjct: 246 FTFSSLLSACRI----EQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFES 301
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
+ + ++++ W+A+I + ++G G A+ LF +M+ ++P+++TF SVL +C+ +
Sbjct: 302 MVV--RNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIW 359
Query: 179 EGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDA---YNLIRTMPIKPNHAVWGALL 235
E + + K + +I R G L +A ++ IR +P+ W +++
Sbjct: 360 EIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIR----EPDLVSWTSVI 415
Query: 236 GACVSH 241
GA SH
Sbjct: 416 GALASH 421
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 135/292 (46%), Gaps = 23/292 (7%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIH-----NSLAREAIQLFKQMLVEDVQPDNATFNSLLPA 67
K+F + + WN ++ G I N A ++L DV D+ +F L+
Sbjct: 92 KLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRL 151
Query: 68 YAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDII 127
++K + +HC +++ G ++ LV Y KCG + A +F + D+D++
Sbjct: 152 CTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVL--DRDLV 209
Query: 128 IWSAIIAAYGKHGHGEMAVSLFNEM--VQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQ 185
+W+A++++Y +G + A L M ++ + + TF+S+L AC +++G +
Sbjct: 210 LWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHA 265
Query: 186 FMLK---HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL-GACVSH 241
+ K IP+ T ++++ ++ L DA +M ++ N W A++ G +
Sbjct: 266 ILFKVSYQFDIPVA---TALLNMYAKSNHLSDARECFESMVVR-NVVSWNAMIVGFAQNG 321
Query: 242 ENVELGEVAARWTFE-LEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVG 292
E E + + E L+P+ +L++ W ++++V+ MV + G
Sbjct: 322 EGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIW-EIKQVQAMVTKKG 372
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 172/300 (57%), Gaps = 11/300 (3%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN-ATFNSLLPAYAIL 71
++F + ++ W +++G++ RE ++L +M+ N T S+L A A
Sbjct: 198 EVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQS 257
Query: 72 ADLKQAMNIHCYLIRSGFLYRLE-------VASILVDIYSKCGSLGYAHHIFNIIPLKDK 124
+L +H Y ++ + E V + LVD+Y+KCG++ + ++F + ++ +
Sbjct: 258 GNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRL--MRKR 315
Query: 125 DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLF 184
+++ W+A+ + HG G M + +F +M++ VKP+ +TFT+VL ACSH G+VDEG F
Sbjct: 316 NVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCF 374
Query: 185 QFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENV 244
+ + + P VDHY C++DLLGRAG +++A L+R MP+ PN V G+LLG+C H V
Sbjct: 375 HSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKV 434
Query: 245 ELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
E+ E R ++ P NT IL++N+Y A GR + +R + + G+RK+P S + V
Sbjct: 435 EIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYV 494
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 107/260 (41%), Gaps = 38/260 (14%)
Query: 19 SKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAM 78
S+K W +LS F L +++LF +M + V+ D+ + L A L DL A
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 79 NIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK---------------- 122
H ++ G L ++V + L+D+Y KCG + IF + K
Sbjct: 132 QGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWE 191
Query: 123 -------------DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMV-QSGVKPNQVTFTSVL 168
+++ + W+ ++A Y G + L EMV + G N VT S+L
Sbjct: 192 GLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSML 251
Query: 169 HACSHVGLVDEGLSLFQFMLKHHIIPLVDHY-------TCIIDLLGRAGRLDDAYNLIRT 221
AC+ G + G + + LK ++ + T ++D+ + G +D + N+ R
Sbjct: 252 SACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRL 311
Query: 222 MPIKPNHAVWGALLGACVSH 241
M K N W AL H
Sbjct: 312 MR-KRNVVTWNALFSGLAMH 330
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 76/154 (49%), Gaps = 2/154 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + S +F K+ WNA+ SG + R I +F QM + +V+PD+ T
Sbjct: 295 MYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLT 353
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F ++L A + + + L G +++ + +VD+ + G + A + +P
Sbjct: 354 FTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMP 413
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ 154
+ ++++ S ++ + HG E+A + E++Q
Sbjct: 414 VPPNEVVLGS-LLGSCSVHGKVEIAERIKRELIQ 446
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 102/226 (45%), Gaps = 15/226 (6%)
Query: 74 LKQAMNIHCYLIRSGFLY--RLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
L+ +H L SG R +++ L Y+ G + A +F+ IPL +KD + W+
Sbjct: 22 LRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTT 81
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSH---VGLVDEGLSLFQFML 188
+++++ ++G ++ LF EM + V+ + V+ + C+ +G +G + +
Sbjct: 82 LLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGV---AV 138
Query: 189 KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGE 248
K ++ V ++D+ G+ G + + + + K + W +L V E +E G
Sbjct: 139 KMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEK-SVVSWTVVLDTVVKWEGLERG- 196
Query: 249 VAARWTFELEPE-NTGNYILLANLYAAVGRWRDV-EKVRDMVNEVG 292
R F PE N + ++ Y G R+V E + +MV G
Sbjct: 197 ---REVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCG 239
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 194 bits (494), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 163/289 (56%), Gaps = 3/289 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
+ F TSK+ A W +++ + N A LF+Q+ ++P+ T + ++ A A A
Sbjct: 414 QCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFA 473
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
L I Y I+SG V + + +Y+K G++ A+ +F I +++ D+ +SA+
Sbjct: 474 ALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVF--IEVQNPDVATYSAM 531
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK-HH 191
I++ +HG A+++F M G+KPNQ F VL AC H GLV +GL FQ M +
Sbjct: 532 ISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYR 591
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA 251
I P H+TC++DLLGR GRL DA NLI + + + W ALL +C +++ +G+ A
Sbjct: 592 INPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVA 651
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
ELEPE +G+Y+LL N+Y G E+VR+++ + G++K PA S
Sbjct: 652 ERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALS 700
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 129/260 (49%), Gaps = 8/260 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + ++F + ++ +N+++SG+ +A++LF + +++ D T
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ L DL +H ++ +G ++ + ++L+D+YSKCG L A +F+
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFD--R 208
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACS---HVGLV 177
++D + W+++I+ Y + G E ++L +M + G+ SVL AC + G +
Sbjct: 209 CDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFI 268
Query: 178 DEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
++G+++ + K + + T ++D+ + G L +A L MP K N + A++
Sbjct: 269 EKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSK-NVVTYNAMISG 327
Query: 238 CVSHENVELGEVAARWTFEL 257
+ + E+ + A+ F+L
Sbjct: 328 FLQMD--EITDEASSEAFKL 345
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 136/326 (41%), Gaps = 45/326 (13%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGF-----IHNSLAREAIQLFKQMLVEDVQ 55
MYAK + K+F K +NA++SGF I + + EA +LF M ++
Sbjct: 296 MYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLE 355
Query: 56 PDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 115
P +TF+ +L A + L+ IH + ++ F + S L+++Y+ GS
Sbjct: 356 PSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQC 415
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVG 175
F +DI W+++I + ++ E A LF ++ S ++P + T + ++ AC+
Sbjct: 416 F--ASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFA 473
Query: 176 LVDEGLSLFQFMLKHHI-------------------IPLVDH------------YTCIID 204
+ G + + +K I +PL + Y+ +I
Sbjct: 474 ALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMIS 533
Query: 205 LLGRAGRLDDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELGE---VAARWTFELE 258
L + G ++A N+ +M IKPN + +L AC V G + + +
Sbjct: 534 SLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRIN 593
Query: 259 PENTGNYILLANLYAAVGRWRDVEKV 284
P N ++ L +L GR D E +
Sbjct: 594 P-NEKHFTCLVDLLGRTGRLSDAENL 618
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 83/159 (52%), Gaps = 3/159 (1%)
Query: 81 HCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHG 140
H ++I+S L + + L+++Y KC LG+A +F+ +P +++II ++++I+ Y + G
Sbjct: 70 HGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP--ERNIISFNSLISGYTQMG 127
Query: 141 HGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYT 200
E A+ LF E ++ +K ++ T+ L C +D G L ++ + + V
Sbjct: 128 FYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLIN 187
Query: 201 CIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+ID+ + G+LD A +L + + W +L+ V
Sbjct: 188 VLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLISGYV 225
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 194 bits (494), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 171/304 (56%), Gaps = 3/304 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+K + + +F + + WN++L GF N + EAI LF M ++ + T
Sbjct: 448 MYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVT 507
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F +++ A + + L++ +H LI SG L L + L+D+Y+KCG L A +F
Sbjct: 508 FLAVIQACSSIGSLEKGKWVHHKLIISG-LKDLFTDTALIDMYAKCGDLNAAETVFR--A 564
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ + I+ WS++I AYG HG A+S FN+MV+SG KPN+V F +VL AC H G V+EG
Sbjct: 565 MSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEG 624
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
F M + P +H+ C IDLL R+G L +AY I+ MP + +VWG+L+ C
Sbjct: 625 KYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRI 684
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H+ +++ + ++ ++TG Y LL+N+YA G W + ++R + L+K+P S
Sbjct: 685 HQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYS 744
Query: 301 LVEV 304
+E+
Sbjct: 745 AIEI 748
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 129/238 (54%), Gaps = 8/238 (3%)
Query: 1 MYAKCNCGNLS--YKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
MY + GNLS K+F + W+ ++S + N +A+++FK M+ + V+PD
Sbjct: 145 MYGQT--GNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDA 202
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
T S++ A L L+ A ++H + R F + + L+ +YSKCG L + IF
Sbjct: 203 VTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEK 262
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
I K+ + W+A+I++Y + E A+ F+EM++SG++PN VT SVL +C +GL+
Sbjct: 263 IA--KKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIR 320
Query: 179 EGLSLFQFMLKHHIIPLVDHYT-CIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
EG S+ F ++ + P + + +++L G+L D ++R + + N W +L+
Sbjct: 321 EGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDR-NIVAWNSLI 377
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 127/243 (52%), Gaps = 19/243 (7%)
Query: 1 MYAKCNCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
MY+KC G+L S ++F K +KK W A++S + + +A++ F +M+ ++P+
Sbjct: 246 MYSKC--GDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNL 303
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASI-LVDIYSKCGSLGYAHHIFN 117
T S+L + ++ +++ ++H + +R E S+ LV++Y++CG L +
Sbjct: 304 VTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLR 363
Query: 118 IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLV 177
++ D++I+ W+++I+ Y G A+ LF +MV +KP+ T S + AC + GLV
Sbjct: 364 VVS--DRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLV 421
Query: 178 DEGLSLFQFMLKHHIIPLVDHY--TCIIDLLGRAGRLDDA---YNLIRTMPIKPNHAVWG 232
G + +++ + D + +ID+ ++G +D A +N I+ + W
Sbjct: 422 PLGKQIHGHVIRTDV---SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSV----VTWN 474
Query: 233 ALL 235
++L
Sbjct: 475 SML 477
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 124/292 (42%), Gaps = 51/292 (17%)
Query: 42 AIQLFKQMLVEDVQPDNATFNSLLPAYAILAD-LKQAMNIHCYLIRSGFLYRLEVASILV 100
AI L+ +++ E Q F S+L A A + L +H +I+ G + + L+
Sbjct: 84 AIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLL 143
Query: 101 DIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPN 160
+Y + G+L A +F+ +P+ +D++ WS ++++ ++G A+ +F MV GV+P+
Sbjct: 144 CMYGQTGNLSDAEKVFDGMPV--RDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPD 201
Query: 161 QVTFTSVLHACSHVGL-----------------VDEGL------------------SLFQ 185
VT SV+ C+ +G +DE L +F+
Sbjct: 202 AVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFE 261
Query: 186 FMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGAC---- 238
+ K + + +T +I R + A M I+PN ++L +C
Sbjct: 262 KIAKKNAVS----WTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIG 317
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNE 290
+ E + A R EL+P + L LYA G+ D E V +V++
Sbjct: 318 LIREGKSVHGFAVRR--ELDPNYESLSLALVELYAECGKLSDCETVLRVVSD 367
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 194 bits (493), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 170/296 (57%), Gaps = 9/296 (3%)
Query: 12 YKMFMKTSKKRT-APWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
YK+FM+ S R WN +++ F R AI LF Q+ E + PD TF+S+L A A
Sbjct: 323 YKLFMEMSHCRDIVAWNGIITAFAVYDPER-AIHLFGQLRQEKLSPDWYTFSSVLKACAG 381
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
L + A++IH +I+ GFL + + L+ Y+KCGSL +F+ + +D++ W+
Sbjct: 382 LVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFD--DMDSRDVVSWN 439
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML-K 189
+++ AY HG + + +F +M + P+ TF ++L ACSH G V+EGL +F+ M K
Sbjct: 440 SMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEK 496
Query: 190 HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEV 249
+P ++HY C+ID+L RA R +A +I+ MP+ P+ VW ALLG+C H N LG++
Sbjct: 497 PETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKL 556
Query: 250 AARWTFEL-EPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
AA EL EP N+ +YI ++N+Y A G + + + +RK P S E+
Sbjct: 557 AADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEI 612
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 146/328 (44%), Gaps = 47/328 (14%)
Query: 1 MYAKCNCGNLSYK---MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPD 57
MY +C+ G +Y+ +F K WN++++ F +L ++AI +F +M + V D
Sbjct: 201 MYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFD 260
Query: 58 NATFNSLLPAYAILADL------KQAMNIHCYLIRSGFLYRLEVASILVDIYSK-CGSLG 110
AT ++ + +DL K + +H ++SG + + EVA+ L+ +YS+
Sbjct: 261 RATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYT 320
Query: 111 YAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHA 170
+ +F + +DI+ W+ II A+ + E A+ LF ++ Q + P+ TF+SVL A
Sbjct: 321 DCYKLFMEMS-HCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKA 378
Query: 171 CSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLD----------------- 213
C+ + LS+ ++K + +I + G LD
Sbjct: 379 CAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSW 438
Query: 214 ----DAYNL----------IRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEP 259
AY+L + M I P+ A + ALL AC VE G R FE +P
Sbjct: 439 NSMLKAYSLHGQVDSILPVFQKMDINPDSATFIALLSACSHAGRVEEGLRIFRSMFE-KP 497
Query: 260 E---NTGNYILLANLYAAVGRWRDVEKV 284
E +Y + ++ + R+ + E+V
Sbjct: 498 ETLPQLNHYACVIDMLSRAERFAEAEEV 525
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 79/136 (58%), Gaps = 7/136 (5%)
Query: 40 REAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEV--AS 97
R A+ LF VE +Q A + +L A A +L +N+H +++ + Y V A+
Sbjct: 43 RRAVSLFYSAPVE-LQSQQA-YAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILAN 100
Query: 98 ILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGV 157
L+++Y+KCG++ YA +F+ +P +++++ W+A+I Y + G+ + LF+ M+ S
Sbjct: 101 FLINMYAKCGNILYARQVFDTMP--ERNVVSWTALITGYVQAGNEQEGFCLFSSML-SHC 157
Query: 158 KPNQVTFTSVLHACSH 173
PN+ T +SVL +C +
Sbjct: 158 FPNEFTLSSVLTSCRY 173
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 87/175 (49%), Gaps = 13/175 (7%)
Query: 1 MYAKCNCGNLSY--KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
MYAKC GN+ Y ++F ++ W A+++G++ +E LF ML P+
Sbjct: 105 MYAKC--GNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSML-SHCFPNE 161
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
T +S+L + + +H ++ G + VA+ ++ +Y +C A+ + +
Sbjct: 162 FTLSSVLTS----CRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTV 217
Query: 119 I-PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACS 172
+K K+++ W+++IAA+ G+ A+ +F M GV ++ T +L+ CS
Sbjct: 218 FEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRAT---LLNICS 269
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 194 bits (493), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 167/297 (56%), Gaps = 6/297 (2%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQ-PDNATFNSLLPAYAILA 72
+F ++ WNAV+ GF EA+ F ML E V P+ +TF + A + +A
Sbjct: 181 LFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIA 240
Query: 73 DLKQAMNIH-CYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
+IH C + G + + V + L+ YSKCG++ + FN + + ++I+ W++
Sbjct: 241 SHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNS 300
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
+I Y +G GE AV++F +MV+ + ++PN VT VL AC+H GL+ EG F +
Sbjct: 301 MIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVND 360
Query: 191 HIIP---LVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 247
+ P ++HY C++D+L R+GR +A LI++MP+ P W ALLG C H N L
Sbjct: 361 YDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLA 420
Query: 248 EVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
++AA EL+P + +Y++L+N Y+A+ W++V +R + E GL++ S +EV
Sbjct: 421 KLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEV 477
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 133/291 (45%), Gaps = 15/291 (5%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
++K+F + + AV+ F+ S EA Q FK++L ++P+ TF +++ +
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTT 105
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
D+K +HCY ++ G + V S +++ Y K +L A F+ +D +++ +
Sbjct: 106 SRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFD--DTRDPNVVSIT 163
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
+I+ Y K E A+SLF M + V VT+ +V+ S G +E ++ F ML+
Sbjct: 164 NLISGYLKKHEFEEALSLFRAMPERSV----VTWNAVIGGFSQTGRNEEAVNTFVDMLRE 219
Query: 191 H-IIPLVDHYTCIIDLLGR-----AGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENV 244
+IP + C I + AG+ A I+ + + N VW +L+ N+
Sbjct: 220 GVVIPNESTFPCAITAISNIASHGAGKSIHAC-AIKFLGKRFNVFVWNSLISFYSKCGNM 278
Query: 245 ELGEVAARWTFELEPENTGNYILLANLYAAVGRWRD-VEKVRDMVNEVGLR 294
E +A E E N ++ + YA GR + V MV + LR
Sbjct: 279 EDSLLAFN-KLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLR 328
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 194 bits (492), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 170/300 (56%), Gaps = 8/300 (2%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED---VQPDNATFNSLL 65
+ +++ F + W V++GF L +A+ +F +M+ + + P+ ATF S+L
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVL 228
Query: 66 PAYAIL--ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD 123
+ A ++ IH Y++ + + + L+D+Y K G L A IF+ I +D
Sbjct: 229 SSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQI--RD 286
Query: 124 KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSL 183
K + W+AII+A +G + A+ +F M S V PN +T ++L AC+ LVD G+ L
Sbjct: 287 KKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQL 346
Query: 184 FQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHE 242
F + ++ IIP +HY C++DL+GRAG L DA N I+++P +P+ +V GALLGAC HE
Sbjct: 347 FSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHE 406
Query: 243 NVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLV 302
N ELG + L+P++ G Y+ L+ A W + EK+R + E G+RK+PA S++
Sbjct: 407 NTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVL 466
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 114/257 (44%), Gaps = 39/257 (15%)
Query: 21 KRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNI 80
K +N ++ ++ + ++ LF ML VQP+N TF SL+ A + + +
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 81 HCYLIRSGFLYRLEVASILV-----------------DIYSKC--------------GSL 109
H ++ GFL+ V + V DI + C G +
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 110 GYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG---VKPNQVTFTS 166
YA F +P+ D++ W+ +I + K G A+ +F EM+Q+ + PN+ TF S
Sbjct: 169 DYAFEYFQRMPV--TDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVS 226
Query: 167 VLHACSHV--GLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPI 224
VL +C++ G + G + +++ II T ++D+ G+AG L+ A + +
Sbjct: 227 VLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRD 286
Query: 225 KPNHAVWGALLGACVSH 241
K A W A++ A S+
Sbjct: 287 KKVCA-WNAIISALASN 302
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 165/277 (59%), Gaps = 3/277 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNATFNSLLPAYAIL 71
++F +T K WNA++SG+ + + A+ LF++M+ V+PD T S+ A + L
Sbjct: 392 EVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSL 451
Query: 72 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP-LKDKDIIIWS 130
L++ H YL S + + ++D+Y+KCGS+ A +IF+ + I W+
Sbjct: 452 GSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWN 511
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
AII HGH ++A+ L++++ +KPN +TF VL AC H GLV+ G + F+ M
Sbjct: 512 AIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSD 571
Query: 191 H-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEV 249
H I P + HY C++DLLG+AGRL++A +I+ MP+K + +WG LL A +H NVE+ E+
Sbjct: 572 HGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAEL 631
Query: 250 AARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRD 286
AA ++P + G ++L+N+YA GRW DV VR+
Sbjct: 632 AATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVRE 668
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 96/199 (48%), Gaps = 9/199 (4%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F ++ + ++ G+ N+ EA++LF++M + + T +++ A + L
Sbjct: 128 KLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLG 187
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
+ + I+ R+ V++ L+ +Y C L A +F+ +P +++++ W+ +
Sbjct: 188 GIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMP--ERNLVTWNVM 245
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
+ Y K G E A LF+++ + + V++ +++ C +DE L + ML+ +
Sbjct: 246 LNGYSKAGLIEQAEELFDQITEKDI----VSWGTMIDGCLRKNQLDEALVYYTEMLRCGM 301
Query: 193 IPLVDHYTCIIDLLGRAGR 211
P ++DLL + R
Sbjct: 302 KP---SEVMMVDLLSASAR 317
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 13/195 (6%)
Query: 44 QLFKQMLVEDVQPDNATFNSLLPAYA---ILADLKQAMNIHCYLIRSGFLYRLEVASILV 100
Q+ ++L + + NS+L YA +LAD + H L + F +I+V
Sbjct: 62 QIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASF-------NIMV 114
Query: 101 DIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPN 160
D Y + L A +F+++P ++ + ++ +I Y ++ A+ LF EM G+ N
Sbjct: 115 DGYVRSRRLWDALKLFDVMP--ERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLN 172
Query: 161 QVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIR 220
+VT +V+ ACSH+G + + L +K + V T ++ + L DA L
Sbjct: 173 EVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFD 232
Query: 221 TMPIKPNHAVWGALL 235
MP + N W +L
Sbjct: 233 EMP-ERNLVTWNVML 246
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 175/306 (57%), Gaps = 17/306 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTS-KKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
M+ KC+ + +F K +K T WN +++G++ + A EA+ F+QM VE QP+
Sbjct: 546 MFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAV 605
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
TF +++ A A L+ L+ M++H LI+ GF + V + LVD+Y+KCG + + F I
Sbjct: 606 TFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCF--I 663
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+ +K I+ W+ +++AY HG AVSLF M ++ +KP+ V+F SVL AC H GLV+E
Sbjct: 664 EISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEE 723
Query: 180 GLSLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G +F+ M +H I V+HY C++DLLG+AG +A ++R M +K + VWGALL +
Sbjct: 724 GKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSS 783
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
H N+ L A +LEP N +Y ++ ++ N ++K+PA
Sbjct: 784 RMHCNLWLSNAALCQLVKLEPLNPSHY-------------SQDRRLGEVNNVSRIKKVPA 830
Query: 299 QSLVEV 304
S +EV
Sbjct: 831 CSWIEV 836
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 123/223 (55%), Gaps = 4/223 (1%)
Query: 5 CNCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFN 62
CNC +L + +F + +K + W +++ + HN E ++LF M DV+ +
Sbjct: 245 CNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAA 304
Query: 63 SLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK 122
S L A A + DL + + IH Y ++ G + + VA+ L+ +YSKCG L A +F I ++
Sbjct: 305 SALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLF--INIE 362
Query: 123 DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLS 182
D+D++ WSA+IA+Y + G + A+SLF +M++ +KPN VT TSVL C+ V G S
Sbjct: 363 DRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKS 422
Query: 183 LFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK 225
+ + +K I ++ T +I + + GR A +PIK
Sbjct: 423 IHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIK 465
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 110/245 (44%), Gaps = 2/245 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC ++ ++F+ + W+A+++ + EAI LF+ M+ ++P+ T
Sbjct: 344 MYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVT 403
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A +A + +IHCY I++ LE A+ ++ +Y+KCG A F +P
Sbjct: 404 LTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLP 463
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+KD + ++A+ Y + G A ++ M GV P+ T +L C+ G
Sbjct: 464 IKDA--VAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARG 521
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
++ ++KH +I++ + L A L + + W ++ +
Sbjct: 522 SCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLL 581
Query: 241 HENVE 245
H E
Sbjct: 582 HGQAE 586
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 134/316 (42%), Gaps = 45/316 (14%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY K + ++F K K WN ++SG N + A+ LF M V D+ +
Sbjct: 144 MYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVS 203
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L+PA + L +H +I+ GF++ +S L+D+Y C L A +F +
Sbjct: 204 LYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAF--SSGLIDMYCNCADLYAAESVFEEVW 261
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
KD+ W ++AAY +G E + LF+ M V+ N+V S L A ++VG + +G
Sbjct: 262 RKDES--SWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKG 319
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRL---------------------------- 212
+++ + ++ +I V T ++ + + G L
Sbjct: 320 IAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQA 379
Query: 213 ---DDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELGE----VAARWTFELEPENT 262
D+A +L R M IKPN ++L C LG+ A + E E E
Sbjct: 380 GQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETA 439
Query: 263 GNYILLANLYAAVGRW 278
I ++YA GR+
Sbjct: 440 TAVI---SMYAKCGRF 452
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 104/235 (44%), Gaps = 16/235 (6%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNATFNSLLPA 67
+LS +F WN+++ G+ L REA+ F M E + PD +F L A
Sbjct: 50 DLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKA 109
Query: 68 YAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDII 127
A D K+ + IH + G + + + LV++Y K L A +F+ + + KD++
Sbjct: 110 CAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHV--KDVV 167
Query: 128 IWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM 187
W+ +++ ++G A+ LF++M V + V+ +++ A S + D L +
Sbjct: 168 TWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLV 227
Query: 188 LKHHII-----PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+K I L+D Y DL ++ + + + + WG ++ A
Sbjct: 228 IKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVW--------RKDESSWGTMMAA 274
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 178/314 (56%), Gaps = 21/314 (6%)
Query: 8 GNLSY--KMFMKTSKKRTAPWNAVLSGFIH-----NSLAREAIQLFKQMLV--EDVQPDN 58
G+L Y K+F + ++ + WNA++ G+ N AR+A+ LF++ V+P +
Sbjct: 161 GDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTD 220
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEV--ASILVDIYSKCGSLGYAHHIF 116
T +L A + L+ +H Y+ + GF ++V + LVD+YSKCG L A +F
Sbjct: 221 TTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVF 280
Query: 117 NIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGL 176
+ +K K++ W+++ +G G +L N M +SG+KPN++TFTS+L A H+GL
Sbjct: 281 EL--MKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGL 338
Query: 177 VDEGLSLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
V+EG+ LF+ M + + P+++HY CI+DLLG+AGR+ +AY I MPIKP+ + +L
Sbjct: 339 VEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLC 398
Query: 236 GACVSHENVELGEVAARWTFELEPENTG-------NYILLANLYAAVGRWRDVEKVRDMV 288
AC + +GE + E+E E+ +Y+ L+N+ A G+W +VEK+R +
Sbjct: 399 NACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEM 458
Query: 289 NEVGLRKLPAQSLV 302
E ++ P S V
Sbjct: 459 KERRIKTRPGYSFV 472
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 13/165 (7%)
Query: 80 IHCYLIRSGFLYRLE-VASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGK 138
+H + + GFLY E + + L+ Y+K G L YA +F+ +P ++ + W+A+I Y
Sbjct: 133 VHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMP--ERTSVTWNAMIGGYCS 190
Query: 139 HG-----HGEMAVSLFNEM--VQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH 191
H + A+ LF SGV+P T VL A S GL++ G + ++ K
Sbjct: 191 HKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLG 250
Query: 192 IIPLVDHY--TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGAL 234
P VD + T ++D+ + G L++A+++ M +K N W ++
Sbjct: 251 FTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVK-NVFTWTSM 294
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 3/146 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC C N ++ +F K W ++ +G N E L +M ++P+ T
Sbjct: 266 MYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEIT 325
Query: 61 FNSLLPAYAILADLKQAMNIHCYL-IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F SLL AY + +++ + + + R G +E +VD+ K G + A+ +
Sbjct: 326 FTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAM 385
Query: 120 PLKDKDIIIWSAIIAA--YGKHGHGE 143
P+K I++ S A YG+ GE
Sbjct: 386 PIKPDAILLRSLCNACSIYGETVMGE 411
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 113/311 (36%), Positives = 169/311 (54%), Gaps = 11/311 (3%)
Query: 1 MYAKCNCGNLSYKMF--MKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQM---LVEDVQ 55
MY KCN + ++F M + W ++++ + N+ EAI+LF+ L D +
Sbjct: 175 MYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSD-R 233
Query: 56 PDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 115
+ S++ A + L L+ H + R G+ VA+ L+D+Y+KCGSL A I
Sbjct: 234 ANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKI 293
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVG 175
F + ++ +I ++++I A KHG GE AV LF+EMV + PN VT VLHACSH G
Sbjct: 294 F--LRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSG 351
Query: 176 LVDEGLSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHA--VWG 232
LV+EGL M K+ ++P HYTC++D+LGR GR+D+AY L +T+ + +WG
Sbjct: 352 LVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWG 411
Query: 233 ALLGACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVG 292
ALL A H VE+ A++ + + T YI L+N YA G W D E +R + G
Sbjct: 412 ALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSG 471
Query: 293 LRKLPAQSLVE 303
K A S +E
Sbjct: 472 NVKERACSWIE 482
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 94/183 (51%), Gaps = 5/183 (2%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED--VQPDNA 59
Y K N + K+F + + W +V+SG+ + A+ +F++M ED V P+
Sbjct: 74 YVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH-EDRPVPPNEY 132
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
TF S+ A + LA+ + NIH L SG + V+S LVD+Y KC + A +F+ +
Sbjct: 133 TFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSM 192
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEM--VQSGVKPNQVTFTSVLHACSHVGLV 177
++++ W+++I AY ++ G A+ LF + + NQ SV+ ACS +G +
Sbjct: 193 IGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRL 252
Query: 178 DEG 180
G
Sbjct: 253 QWG 255
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 191 bits (484), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 168/298 (56%), Gaps = 5/298 (1%)
Query: 6 NCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNS 63
+CG + + ++F + K WN++ +GF N E ++ F QM D+ D + +S
Sbjct: 396 SCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSS 455
Query: 64 LLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD 123
++ A A ++ L+ + G V+S L+D+Y KCG + + +F+ + D
Sbjct: 456 VISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSD 515
Query: 124 KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSL 183
+ + W+++I+ Y +G G A+ LF +M +G++P Q+TF VL AC++ GLV+EG L
Sbjct: 516 E--VPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKL 573
Query: 184 FQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHE 242
F+ M + H +P +H++C++DLL RAG +++A NL+ MP + ++W ++L CV++
Sbjct: 574 FESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANG 633
Query: 243 NVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
+G+ AA ELEPEN+ Y+ L+ ++A G W VR ++ E + K P S
Sbjct: 634 YKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSS 691
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 128/268 (47%), Gaps = 37/268 (13%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YA C N S +F + S + WN+++SG+I N++ EA+ LF +M E + D+ T
Sbjct: 263 YANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNE-TREDSRTL 321
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP- 120
+++ A L L+ +HC+ + G + + VAS L+D+YSKCGS A +F+ +
Sbjct: 322 AAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVES 381
Query: 121 ----------------------------LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEM 152
+++K +I W+++ + ++G + F++M
Sbjct: 382 YDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQM 441
Query: 153 VQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHY---TCIIDLLGRA 209
+ + ++V+ +SV+ AC+ + ++ G +F + I+ L + +IDL +
Sbjct: 442 HKLDLPTDEVSLSSVISACASISSLELGEQVFA---RATIVGLDSDQVVSSSLIDLYCKC 498
Query: 210 GRLDDAYNLIRTMPIKPNHAVWGALLGA 237
G ++ + TM +K + W +++
Sbjct: 499 GFVEHGRRVFDTM-VKSDEVPWNSMISG 525
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 110/238 (46%), Gaps = 33/238 (13%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
+AK +++ ++F +K N++L G+I N A EA++LFK++ + D T
Sbjct: 134 FAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITL 190
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
++L A A L LK IH ++ G ++ S LV++Y+KCG L A ++ I
Sbjct: 191 TTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIRE 250
Query: 122 KD-----------------------------KDIIIWSAIIAAYGKHGHGEMAVSLFNEM 152
D + +I+W+++I+ Y + A+ LFNEM
Sbjct: 251 PDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM 310
Query: 153 VQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAG 210
++ + + T +V++AC +G ++ G + K +I + + ++D+ + G
Sbjct: 311 -RNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCG 367
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 2/146 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y KC ++F K PWN+++SG+ N EAI LFK+M V ++P T
Sbjct: 494 LYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQIT 553
Query: 61 FNSLLPAYAILADLKQAMNI-HCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F +L A +++ + + GF+ E S +VD+ ++ G + A ++ +
Sbjct: 554 FMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEM 613
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMA 145
P D D +WS+I+ +G+ M
Sbjct: 614 PF-DVDGSMWSSILRGCVANGYKAMG 638
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 190 bits (483), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 169/306 (55%), Gaps = 7/306 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + + ++F + KK W A+++ + N + EA +LF +M V PD T
Sbjct: 277 MYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGT 336
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+++L A + L+ I + + + VA+ LVD+Y KCG + A +F +P
Sbjct: 337 LSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMP 396
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+K++ W+A+I AY GH + A+ LF+ M V P+ +TF VL AC H GLV +G
Sbjct: 397 VKNE--ATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQG 451
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
F M ++P ++HYT IIDLL RAG LD+A+ + P KP+ + A+LGAC
Sbjct: 452 CRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACH 511
Query: 240 SHENVELGEVAARWTFEL-EPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
++V + E A R E+ E +N GNY++ +N+ A + W + K+R ++ + G+ K P
Sbjct: 512 KRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPG 571
Query: 299 QSLVEV 304
S +E+
Sbjct: 572 CSWIEI 577
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 131/241 (54%), Gaps = 11/241 (4%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + K+F + +++ T WN+++SG+ A++A+ LF++M E +PD T
Sbjct: 176 MYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERT 235
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A + L DL+ + I + S L+ +Y KCG L A +FN +
Sbjct: 236 LVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMI 295
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
KD+ + W+A+I Y ++G A LF EM ++GV P+ T ++VL AC VG ++ G
Sbjct: 296 KKDR--VAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELG 353
Query: 181 LSL----FQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLG 236
+ + L+H+I T ++D+ G+ GR+++A + MP+K N A W A++
Sbjct: 354 KQIETHASELSLQHNIYVA----TGLVDMYGKCGRVEEALRVFEAMPVK-NEATWNAMIT 408
Query: 237 A 237
A
Sbjct: 409 A 409
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 130/256 (50%), Gaps = 9/256 (3%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREA-IQLFKQMLVEDVQPDNATFNSLLPA 67
N S +F T + +N ++ G + EA + L+++M ++PD T+N + A
Sbjct: 82 NYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIA 141
Query: 68 YAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDII 127
A L ++ ++H L + G + + L+ +Y+KCG +GYA +F+ I ++D +
Sbjct: 142 CAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEIT--ERDTV 199
Query: 128 IWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM 187
W+++I+ Y + G+ + A+ LF +M + G +P++ T S+L ACSH+G + G L +
Sbjct: 200 SWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMA 259
Query: 188 LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 247
+ I + +I + G+ G LD A + M IK + W A++ V +N G
Sbjct: 260 ITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQM-IKKDRVAWTAMI--TVYSQN---G 313
Query: 248 EVAARWTFELEPENTG 263
+ + + E E TG
Sbjct: 314 KSSEAFKLFFEMEKTG 329
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 190 bits (483), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 111/308 (36%), Positives = 171/308 (55%), Gaps = 10/308 (3%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIH-NSLAREAIQLFKQMLVEDVQPDNAT 60
Y KC ++K+ T K+ A+++GF N+ +A +FK M+ + D
Sbjct: 259 YVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVV 318
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVA--SILVDIYSKCGSLGYAHHIFNI 118
+S+L +A + IH + ++S + R +VA + L+D+Y+K G + A F
Sbjct: 319 VSSMLKICTTIASVTIGRQIHGFALKSSQI-RFDVALGNSLIDMYAKSGEIEDAVLAFE- 376
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
+K+KD+ W+++IA YG+HG+ E A+ L+N M +KPN VTF S+L ACSH G +
Sbjct: 377 -EMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTE 435
Query: 179 EGLSLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP--IKPNHAVWGALL 235
G ++ M+ KH I +H +CIID+L R+G L++AY LIR+ + + + WGA L
Sbjct: 436 LGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFL 495
Query: 236 GACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVG-LR 294
AC H NV+L +VAA +EP NYI LA++YAA G W + R ++ E G
Sbjct: 496 DACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCN 555
Query: 295 KLPAQSLV 302
K P SLV
Sbjct: 556 KAPGYSLV 563
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 122/283 (43%), Gaps = 38/283 (13%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YA+C + F ++ WNA++ G+ N+ A + LF+ ML E +PD T
Sbjct: 157 LYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFT 216
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F SLL A ++ L+ +H I+ GF + LV+ Y KCGSL A +
Sbjct: 217 FGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHE--G 274
Query: 121 LKDKDIIIWSAIIAAYGKHGH-GEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
K +D++ +A+I + + + A +F +M++ K ++V +S+L C+ + V
Sbjct: 275 TKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTI 334
Query: 180 GLSLFQFMLKHHII--------PLVDHY------------------------TCIIDLLG 207
G + F LK I L+D Y T +I G
Sbjct: 335 GRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYG 394
Query: 208 RAGRLD---DAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 247
R G + D YN + IKPN + +LL AC ELG
Sbjct: 395 RHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELG 437
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 87/158 (55%), Gaps = 2/158 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F + SK+ W A++S F +A+ LFK+M EDV+ + T+ S+L + L
Sbjct: 68 KLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLG 127
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
LK+ M IH + + L V S L+ +Y++CG + A F+ +K++D++ W+A+
Sbjct: 128 CLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFD--SMKERDLVSWNAM 185
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHA 170
I Y + + + SLF M+ G KP+ TF S+L A
Sbjct: 186 IDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 89/161 (55%), Gaps = 3/161 (1%)
Query: 75 KQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIA 134
KQ + IH I +GF L++ +L+D+Y K G + +A +F+ I +D++ W+A+I+
Sbjct: 29 KQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRIS--KRDVVSWTAMIS 86
Query: 135 AYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIP 194
+ + G+ A+ LF EM + VK NQ T+ SVL +C +G + EG+ + + K +
Sbjct: 87 RFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAG 146
Query: 195 LVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ + ++ L R G++++A +M + + W A++
Sbjct: 147 NLIVRSALLSLYARCGKMEEARLQFDSMK-ERDLVSWNAMI 186
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 189 bits (480), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 166/307 (54%), Gaps = 7/307 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTS--KKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
MY KC G++S F S W ++SG I N A +F QM + V PD
Sbjct: 561 MYVKC--GDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDE 618
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
T +L A + L L+Q IH ++ V + LVD+Y+KCGS+ A+ +F
Sbjct: 619 FTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKR 678
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
I + + I W+A++ +HG G+ + LF +M G+KP++VTF VL ACSH GLV
Sbjct: 679 IEMMN--ITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVS 736
Query: 179 EGLSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
E + M + I P ++HY+C+ D LGRAG + A NLI +M ++ + +++ LL A
Sbjct: 737 EAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAA 796
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
C + E G+ A ELEP ++ Y+LL+N+YAA +W +++ R M+ ++K P
Sbjct: 797 CRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDP 856
Query: 298 AQSLVEV 304
S +EV
Sbjct: 857 GFSWIEV 863
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 112/218 (51%), Gaps = 7/218 (3%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
WNA+++G+ + + ++LF M + + D+ T ++ L + Q +H Y I
Sbjct: 485 WNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAI 544
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+SG+ L V+S ++D+Y KCG + A F+ IP+ D + W+ +I+ ++G E A
Sbjct: 545 KSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD--VAWTTMISGCIENGEEERA 602
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII--PLVDHYTCII 203
+F++M GV P++ T ++ A S + +++G + LK + P V T ++
Sbjct: 603 FHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG--TSLV 660
Query: 204 DLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
D+ + G +DDAY L + + + N W A+L H
Sbjct: 661 DMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQH 697
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 116/246 (47%), Gaps = 5/246 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY K + +F S++ WN+V++G N L EA+ LF Q+L ++PD T
Sbjct: 359 MYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYT 418
Query: 61 FNSLLPAYAILAD-LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
S+L A + L + L + +H + I+ + V++ L+D YS+ + A +F
Sbjct: 419 MTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFE-- 476
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+ D++ W+A++A Y + G + LF M + G + + T +V C + +++
Sbjct: 477 -RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQ 535
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
G + + +K + + I+D+ + G + A ++P+ P+ W ++ C+
Sbjct: 536 GKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGCI 594
Query: 240 SHENVE 245
+ E
Sbjct: 595 ENGEEE 600
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 90/166 (54%), Gaps = 5/166 (3%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIR 86
N LS ++H+ ++ F M+ DV+ D TF +L + L +HC ++
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 87 SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAV 146
G L V++ L+++Y K G+A +F+ + ++D+I W+++IA ++G AV
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFD--NMSERDLISWNSVIAGIAQNGLEVEAV 401
Query: 147 SLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
LF ++++ G+KP+Q T TSVL A S + EGLSL + + H I
Sbjct: 402 CLFMQLLRCGLKPDQYTMTSVLKAASS---LPEGLSLSKQVHVHAI 444
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 84/171 (49%), Gaps = 11/171 (6%)
Query: 1 MYAKCNCGNLSY--KMFMKTSKKRTAPWNAVLSGFIHNSLA-----REAIQLFKQMLVED 53
MY+KC G+L+Y ++F K + WN++L+ + +S ++A LF+ + +
Sbjct: 83 MYSKC--GSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDV 140
Query: 54 VQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH 113
V T + +L + + + H Y + G VA LV+IY K G +
Sbjct: 141 VYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGK 200
Query: 114 HIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTF 164
+F +P +D +++W+ ++ AY + G E A+ L + SG+ PN++T
Sbjct: 201 VLFEEMPYRD--VVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Query: 99 LVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHG-----EMAVSLFNEMV 153
L+ +YSKCGSL YA +F+ +P D+D++ W++I+AAY + + A LF +
Sbjct: 80 LISMYSKCGSLTYARRVFDKMP--DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILR 137
Query: 154 QSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLD 213
Q V +++T + +L C H G V S + K + ++++ + G++
Sbjct: 138 QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVK 197
Query: 214 DAYNLIRTMPIKPNHAVWGALLGA 237
+ L MP + + +W +L A
Sbjct: 198 EGKVLFEEMPYR-DVVLWNLMLKA 220
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 188 bits (478), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 174/311 (55%), Gaps = 17/311 (5%)
Query: 6 NCGNLSY--KMFMKTSKKRT-APWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFN 62
+ G++ Y ++F +T +K+ W A++S + N + EAI+LFK+M E ++ D
Sbjct: 112 SVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVT 171
Query: 63 SLLPAYAILADLKQAMNIHCYLIRSG--FLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
L A A L ++ I+ I+ L + + L+++Y K G A +F+
Sbjct: 172 VALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFD--E 229
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEM------VQSGVKPNQVTFTSVLHACSHV 174
KD+ ++++I Y +G + ++ LF +M + + PN VTF VL ACSH
Sbjct: 230 SMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHS 289
Query: 175 GLVDEGLSLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGA 233
GLV+EG F+ M + +++ P H+ C++DL R+G L DA+ I MPIKPN +W
Sbjct: 290 GLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRT 349
Query: 234 LLGACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGL 293
LLGAC H NVELGE R FEL+ ++ G+Y+ L+N+YA+ G W + K+RD V +
Sbjct: 350 LLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRK--- 406
Query: 294 RKLPAQSLVEV 304
R++P +S +E+
Sbjct: 407 RRMPGKSWIEL 417
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Query: 79 NIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGK 138
IH + + GF +++ + LV YS G + YA +F+ P K ++I++W+A+I+AY +
Sbjct: 86 QIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEK-QNIVLWTAMISAYTE 144
Query: 139 HGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
+ + A+ LF M ++ + V T L AC+ +G V G ++ +K
Sbjct: 145 NENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKR 196
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 74/152 (48%), Gaps = 8/152 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED------V 54
MY K + K+F ++ +K + +++ G+ N A+E+++LFK+M D +
Sbjct: 213 MYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVI 272
Query: 55 QPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVA-SILVDIYSKCGSLGYAH 113
P++ TF +L A + +++ +I L E +VD++ + G L AH
Sbjct: 273 TPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAH 332
Query: 114 HIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
N +P+K + +IW ++ A HG+ E+
Sbjct: 333 EFINQMPIK-PNTVIWRTLLGACSLHGNVELG 363
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 168/305 (55%), Gaps = 3/305 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY K + K+F ++ W ++ G + A+Q F +M E + D +
Sbjct: 446 MYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFS 505
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+S++ A + +A L+Q HC IR+GF + V LVD+Y K G A IF++
Sbjct: 506 LSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLA- 564
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ D+ W++++ AY +HG E A+S F +++++G P+ VT+ S+L ACSH G +G
Sbjct: 565 -SNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQG 623
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHA-VWGALLGACV 239
L+ M + I HY+C+++L+ +AG +D+A LI P N A +W LL ACV
Sbjct: 624 KFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACV 683
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
+ N+++G AA +L+PE+T +ILL+NLYA GRW DV ++R + + K P
Sbjct: 684 NTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGL 743
Query: 300 SLVEV 304
S +EV
Sbjct: 744 SWIEV 748
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 116/239 (48%), Gaps = 4/239 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHN-SLAREAIQLFKQMLVEDVQPDNA 59
MY +C + K+F K + +NA+ S + N A A L M E V+P+++
Sbjct: 141 MYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSS 200
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
TF SL+ A+L D+ +++ +I+ G+ + V + ++ +YS CG L A IF+ +
Sbjct: 201 TFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCV 260
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
++D + W+ +I K+ E + F M+ SGV P Q T++ VL+ CS +G
Sbjct: 261 --NNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSL 318
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G + ++ + + ++D+ G + +A+ + + PN W +++ C
Sbjct: 319 GKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIH-NPNLVSWNSIISGC 376
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 89/174 (51%), Gaps = 3/174 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+ C + ++F + + WN ++ G + N + + F+ ML+ V P T
Sbjct: 243 MYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFT 302
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
++ +L + L IH +I S L L + + L+D+Y CG + A ++F I
Sbjct: 303 YSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRI- 361
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSVLHACSH 173
+ +++ W++II+ ++G GE A+ ++ +++ S +P++ TF++ + A +
Sbjct: 362 -HNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAE 414
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 184 bits (468), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 160/288 (55%), Gaps = 23/288 (7%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY K + + ++F +K WN ++ + L E + L +QM E ++P+++T
Sbjct: 271 MYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSST 330
Query: 61 FNSLLPAYA---------ILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGY 111
F LL + A +ADL + I I + + LVD+Y+K G L
Sbjct: 331 FVGLLSSCAYSEAAFVGRTVADLLEEERIALDAI---------LGTALVDMYAKVGLLEK 381
Query: 112 AHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSG--VKPNQVTFTSVLH 169
A IFN +KDKD+ W+A+I+ YG HG AV+LFN+M + V+PN++TF VL+
Sbjct: 382 AVEIFN--RMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLN 439
Query: 170 ACSHVGLVDEGLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNH 228
ACSH GLV EG+ F+ M++ + P V+HY C++DLLGRAG+L++AY LIR +PI +
Sbjct: 440 ACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDS 499
Query: 229 AVWGALLGACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVG 276
W ALL AC + N +LGE E+ + + ILLA +A G
Sbjct: 500 TAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAG 547
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 119/260 (45%), Gaps = 9/260 (3%)
Query: 5 CNCGNLS--YKMFMKTSKKRTA-PWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
C CG +S K+F + + A ++ +++G++ S A+ LF+ M +V + +T
Sbjct: 171 CVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTL 230
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
S L A + L DL A + H I+ G L + + L+ +Y K G + A IF+
Sbjct: 231 LSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAI- 289
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
KD++ W+ +I Y K G E V L +M +KPN TF +L +C++ G
Sbjct: 290 -RKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGR 348
Query: 182 SLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
++ + + I T ++D+ + G L+ A + M K + W A++ +H
Sbjct: 349 TVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKS-WTAMISGYGAH 407
Query: 242 ENVELGEVAARWTFELEPEN 261
L A ++E EN
Sbjct: 408 ---GLAREAVTLFNKMEEEN 424
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 72/163 (44%), Gaps = 3/163 (1%)
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
D + IH Y++++G L + + A + +S + YA IF + + ++ +++ +
Sbjct: 40 DTVEVSRIHGYMVKTG-LDKDDFAVSKLLAFSSVLDIRYASSIFEHVS--NTNLFMFNTM 96
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
I Y E A S+FN++ G+ ++ +F + L +CS V G L L+
Sbjct: 97 IRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGF 156
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ D +I G++ DA + MP + + L+
Sbjct: 157 MVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLM 199
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 184 bits (467), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 155/278 (55%), Gaps = 3/278 (1%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
N + ++F +K W +++GF AI + +ML + ++P+ T ++L A
Sbjct: 244 NRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSAC 303
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIII 128
+ L + IH Y++ +G + + LVD+Y+KCG L A +F+ + KDI+
Sbjct: 304 SKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFS--NMNHKDILS 361
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM- 187
W+A+I + HG A+ F +M+ SG KP++V F +VL AC + VD GL+ F M
Sbjct: 362 WTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMR 421
Query: 188 LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 247
L + I P + HY ++DLLGRAG+L++A+ L+ MPI P+ W AL AC +H+
Sbjct: 422 LDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRA 481
Query: 248 EVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVR 285
E ++ EL+PE G+YI L +A+ G +DVEK R
Sbjct: 482 ESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRR 519
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 108/235 (45%), Gaps = 13/235 (5%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
+ S +F + ++ NA++ G N+ +++ F ML V+PD TF +L +
Sbjct: 77 DYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSN 136
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP--LKDKDI 126
+ L +H +++ V LVD+Y+K G L +A +F P +K + I
Sbjct: 137 SKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESI 196
Query: 127 IIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQF 186
+IW+ +I Y + MA +LF M + N ++++++ G ++ LF+
Sbjct: 197 LIWNVLINGYCRAKDMHMATTLFRSMPER----NSGSWSTLIKGYVDSGELNRAKQLFEL 252
Query: 187 MLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGAC 238
M + +++ +T +I+ + G + A + M +KPN A+L AC
Sbjct: 253 MPEKNVVS----WTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSAC 303
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 109/238 (45%), Gaps = 12/238 (5%)
Query: 56 PDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 115
PD + F SL+ A A L+ ++H ++R G L VA+ LV S S Y+ I
Sbjct: 27 PDESHFISLIHACKDTASLR---HVHAQILRRGVLSS-RVAAQLVSCSSLLKSPDYSLSI 82
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVG 175
F ++++ + +A+I ++ E +V F M++ GVKP+++TF VL + S +G
Sbjct: 83 FR--NSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLG 140
Query: 176 LVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP---IKPNHAVWG 232
G +L LK+ + ++D+ + G+L A+ + P K + +W
Sbjct: 141 FRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWN 200
Query: 233 ALLGACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNE 290
L+ +++ + R + N+G++ L Y G +++ +++ E
Sbjct: 201 VLINGYCRAKDMHMATTLFR---SMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPE 255
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 2/155 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + + +F + K W A++ G+ + +AIQ F+QM+ +PD
Sbjct: 337 MYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVV 396
Query: 61 FNSLLPAYAILADLKQAMNIHCYL-IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F ++L A +++ +N + + L+ ++VD+ + G L AH + +
Sbjct: 397 FLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENM 456
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ 154
P+ + D+ W+A+ A H A S+ +++
Sbjct: 457 PI-NPDLTTWAALYRACKAHKGYRRAESVSQNLLE 490
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 162/300 (54%), Gaps = 12/300 (4%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQ-PDNAT 60
YA + ++F + WNA+++ + H E +++F +ML + + PD T
Sbjct: 247 YAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFT 306
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A A L L Q +H Y+ + G +A+ LVD+YSKCG + A +F
Sbjct: 307 LVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFR--A 364
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+D+ W++II+ HG G+ A+ +F+EMV G KPN +TF VL AC+HVG++D+
Sbjct: 365 TSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQA 424
Query: 181 LSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
LF+ M + + P ++HY C++DLLGR G++++A L+ +P + +LLGAC
Sbjct: 425 RKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACK 484
Query: 240 SHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQ 299
+E E A EL ++ Y ++NLYA+ GRW EKV D G R + A+
Sbjct: 485 RFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRW---EKVID-----GRRNMRAE 536
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 112/234 (47%), Gaps = 29/234 (12%)
Query: 31 SGFIHNSLARE---------AIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIH 81
+GF HNS+ R A+ +F++ML+ V PD +F +L A A ++ IH
Sbjct: 104 NGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIH 163
Query: 82 CYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGH 141
I+SG + + V + LV++Y + G A + + +P++D + W+++++AY + G
Sbjct: 164 GLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDA--VSWNSLLSAYLEKGL 221
Query: 142 GEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIP------L 195
+ A +LF+EM + V+ ++ ++ + GLV E +F M ++
Sbjct: 222 VDEARALFDEMEERNVE----SWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTA 277
Query: 196 VDHYTCIIDLLGRAGR-LDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGE 248
H C ++L + LDD+ KP+ ++L AC S ++ GE
Sbjct: 278 YAHVGCYNEVLEVFNKMLDDSTE-------KPDGFTLVSVLSACASLGSLSQGE 324
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 82/158 (51%), Gaps = 8/158 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC + + ++F TSK+ + WN+++S + L ++A+++F +M+ E +P+ T
Sbjct: 348 MYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGIT 407
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVA----SILVDIYSKCGSLGYAHHIF 116
F +L A + L QA + + +YR+E +VD+ + G + A +
Sbjct: 408 FIGVLSACNHVGMLDQARKLFEMM---SSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELV 464
Query: 117 NIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ 154
N IP + I++ S ++ A + G E A + N +++
Sbjct: 465 NEIPADEASILLES-LLGACKRFGQLEQAERIANRLLE 501
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/283 (36%), Positives = 158/283 (55%), Gaps = 15/283 (5%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIR 86
N+++SG I N +EA +L+ +P+ +S L + +DL IHC +R
Sbjct: 255 NSLISGCIRNRNYKEAF-----LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALR 309
Query: 87 SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAV 146
+GF+ ++ + L+D+Y KCG + A IF IP K ++ W+++I AY +G G A+
Sbjct: 310 NGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIP--SKSVVSWTSMIDAYAVNGDGVKAL 367
Query: 147 SLFNEMVQ--SGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML-KHHIIPLVDHYTCII 203
+F EM + SGV PN VTF V+ AC+H GLV EG F M K+ ++P +HY C I
Sbjct: 368 EIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFI 427
Query: 204 DLLGRAGRLDDAYNLIRTMPIKPNH----AVWGALLGACVSHENVELGE-VAARWTFELE 258
D+L +AG ++ + L+ M N A+W A+L AC + ++ GE VA R E
Sbjct: 428 DILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETG 487
Query: 259 PENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSL 301
PEN Y+L++N YAA+G+W VE++R + GL K SL
Sbjct: 488 PENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHSL 530
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 104/227 (45%), Gaps = 8/227 (3%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
S ++F +K WNA+LSGF+ N +EA+ +F M E V+ T +S++ A
Sbjct: 138 SVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCAS 197
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
L L+Q +H ++ +G + + + ++ YS G + A ++N + + ++++ S
Sbjct: 198 LKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNS 256
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
I + E ++ S +PN +S L CS + G + L++
Sbjct: 257 LISGCIRNRNYKEAF------LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRN 310
Query: 191 HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+ ++D+ G+ G++ A + R +P K + W +++ A
Sbjct: 311 GFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSK-SVVSWTSMIDA 356
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 105/205 (51%), Gaps = 7/205 (3%)
Query: 41 EAIQLFKQMLVEDVQPD--NATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASI 98
+ + LF Q + PD + TF +L A ++L+ + +H +I+ G +
Sbjct: 67 DTLALFLQ--IHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTA 124
Query: 99 LVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVK 158
L+D+YSK G L + +F +++KD++ W+A+++ + ++G G+ A+ +F M + V+
Sbjct: 125 LIDMYSKYGHLVDSVRVFE--SVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVE 182
Query: 159 PNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNL 218
++ T +SV+ C+ + ++ +G + ++ LV T +I G +++A +
Sbjct: 183 ISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG-RDLVVLGTAMISFYSSVGLINEAMKV 241
Query: 219 IRTMPIKPNHAVWGALLGACVSHEN 243
++ + + + +L+ C+ + N
Sbjct: 242 YNSLNVHTDEVMLNSLISGCIRNRN 266
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 177 bits (450), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 169/302 (55%), Gaps = 4/302 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY++C C + +F S+ +++++G+ +EA+ LF ++ + +PD
Sbjct: 251 MYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVL 310
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L + A L+D +H Y+IR G ++V S L+D+YSKCG L A +F IP
Sbjct: 311 VAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP 370
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+K+I+ ++++I G HG A F E+++ G+ P+++TF+++L C H GL+++G
Sbjct: 371 --EKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKG 428
Query: 181 LSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
+F+ M I P +HY ++ L+G AG+L++A+ + ++ + + GALL C
Sbjct: 429 QEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCE 488
Query: 240 SHENVELGEVAARWTFELEPENTGNY-ILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
HEN L EV A + E Y ++L+N+YA GRW +VE++RD ++E KLP
Sbjct: 489 VHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPG 548
Query: 299 QS 300
S
Sbjct: 549 IS 550
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 7/171 (4%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F ++ WN+++ + + LF Q+L D +PDN T+ L ++
Sbjct: 61 KLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESF 120
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
D K IH I SG + S +V YSK G + A +F IP D D+ +W+ +
Sbjct: 121 DTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIP--DPDLALWNVM 178
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSL 183
I YG G + ++LFN M G +PN T ++ GL+D L L
Sbjct: 179 ILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTS-----GLIDPSLLL 224
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 2/213 (0%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F A WN ++ G+ + I LF M QP+ T +L +
Sbjct: 162 KLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPS 221
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
L A ++H + ++ V LV++YS+C + A +FN I + D++ S++
Sbjct: 222 LLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSI--SEPDLVACSSL 279
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
I Y + G+ + A+ LF E+ SG KP+ V VL +C+ + G + ++++ +
Sbjct: 280 ITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGL 339
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK 225
+ + +ID+ + G L A +L +P K
Sbjct: 340 ELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEK 372
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 163/293 (55%), Gaps = 5/293 (1%)
Query: 6 NCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNS 63
N GN+ ++K+F + K ++ ++ G + + A LF++++ + D ++
Sbjct: 389 NVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSN 448
Query: 64 LLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD 123
+L + LA L IH I+ G+ A+ LVD+Y KCG + +F+ + +
Sbjct: 449 ILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFD--GMLE 506
Query: 124 KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSL 183
+D++ W+ II +G++G E A F++M+ G++PN+VTF +L AC H GL++E S
Sbjct: 507 RDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARST 566
Query: 184 FQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHE 242
+ M + + P ++HY C++DLLG+AG +A LI MP++P+ +W +LL AC +H+
Sbjct: 567 LETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHK 626
Query: 243 NVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRK 295
N L V A + P++ Y L+N YA +G W + KVR+ ++G ++
Sbjct: 627 NAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLGAKE 679
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 152/340 (44%), Gaps = 58/340 (17%)
Query: 1 MYAKCNCGNLSYKMFMKTSKK-----RTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQ 55
MY+ NCG+L Y + +K A WN++LSGF+ N A+ L Q+ D+
Sbjct: 282 MYS--NCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLC 339
Query: 56 PDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 115
D+ T + L +L+ + +H ++ SG+ V SILVD+++ G++ AH +
Sbjct: 340 FDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKL 399
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHV- 174
F+ +P +KDII +S +I K G +A LF E+++ G+ +Q +++L CS +
Sbjct: 400 FHRLP--NKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLA 457
Query: 175 ----------------------------------GLVDEGLSLFQFMLKHHIIPLVDHYT 200
G +D G+ LF ML+ ++ +T
Sbjct: 458 SLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVS----WT 513
Query: 201 CIIDLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELGEVAARWTFEL 257
II G+ GR+++A+ M I+PN + LL AC +E AR T E
Sbjct: 514 GIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLE----EARSTLET 569
Query: 258 EPENTGNYILLANLYAAV---GRWRDVEKVRDMVNEVGLR 294
G L + Y V G+ ++ +++N++ L
Sbjct: 570 MKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLE 609
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 111/251 (44%), Gaps = 18/251 (7%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y K + + +F + + WN ++SGF+ R A++ +M E + D
Sbjct: 183 YCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFAL 241
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
L A + L +HC +++SG S L+D+YS CGSL YA +F+ L
Sbjct: 242 PCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKL 301
Query: 122 K-DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHAC-SHVGLVDE 179
+ + +W+++++ + + E A+ L ++ QS + + T + L C ++V L
Sbjct: 302 AVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNL--- 358
Query: 180 GLSLFQFMLKHHIIPLVDHY-------TCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWG 232
+ L+ H + +V Y + ++DL G + DA+ L +P K A G
Sbjct: 359 -----RLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSG 413
Query: 233 ALLGACVSHEN 243
+ G S N
Sbjct: 414 LIRGCVKSGFN 424
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 88/167 (52%), Gaps = 5/167 (2%)
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
K+ +I ++I+ G + +A+ ++ +Y L AH +F+ + +++I+ W+ ++
Sbjct: 21 FKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFD--EMSERNIVTWTTMV 78
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKP-NQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
+ Y G A+ L+ M+ S + N+ +++VL AC VG + G+ +++ + K ++
Sbjct: 79 SGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENL 138
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL-GAC 238
V ++D+ + GRL +A + + + ++P+ W L+ G C
Sbjct: 139 RGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNTLISGYC 184
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 3/180 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + +F ++ W ++ GF N EA + F +M+ ++P+ T
Sbjct: 487 MYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVT 546
Query: 61 FNSLLPAYAILADLKQAMN-IHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F LL A L++A + + G LE +VD+ + G A+ + N +
Sbjct: 547 FLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKM 606
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
PL + D IW++++ A G H + + V++ E + G + +TS+ +A + +G+ D+
Sbjct: 607 PL-EPDKTIWTSLLTACGTHKNAGL-VTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQ 664
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 88/171 (51%), Gaps = 12/171 (7%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA-TFNSLLPAYA 69
++K+F + S++ W ++SG+ + +AI+L+++ML + + N ++++L A
Sbjct: 59 AHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACG 118
Query: 70 ILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIW 129
++ D++ + ++ + + + + + +VD+Y K G L A+ F I W
Sbjct: 119 LVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSS--TSW 176
Query: 130 SAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ +I+ Y K G + AV+LF+ M Q PN V++ C G VD+G
Sbjct: 177 NTLISGYCKAGLMDEAVTLFHRMPQ----PNVVSWN-----CLISGFVDKG 218
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 165/295 (55%), Gaps = 6/295 (2%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F ++ K W A+++G++ + EA++LF+ M ++PDN SLL A
Sbjct: 235 LFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGA 294
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
L+Q IH Y+ + V + LVD+Y+KCG + A +F +K++D W+++I
Sbjct: 295 LEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVF--YEIKERDTASWTSLI 352
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML-KHHI 192
+G A+ L+ EM GV+ + +TF +VL AC+H G V EG +F M +H++
Sbjct: 353 YGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNV 412
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHA---VWGALLGACVSHENVELGEV 249
P +H +C+IDLL RAG LD+A LI M + + V+ +LL A ++ NV++ E
Sbjct: 413 QPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAER 472
Query: 250 AARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
A ++E ++ + LLA++YA+ RW DV VR + ++G+RK P S +E+
Sbjct: 473 VAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEI 527
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 127/265 (47%), Gaps = 32/265 (12%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNA 59
MYA +++K+F + ++ WN ++S ++ N +AI +FK+M E +++ D
Sbjct: 90 MYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEG 149
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T S L A + L +L+ I+ +++ + F + + + LVD++ KCG L A +F+ +
Sbjct: 150 TIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDKARAVFDSM 208
Query: 120 PLKD-----------------------------KDIIIWSAIIAAYGKHGHGEMAVSLFN 150
K+ KD+++W+A++ Y + + A+ LF
Sbjct: 209 RDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFR 268
Query: 151 EMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAG 210
M +G++P+ S+L C+ G +++G + ++ ++ + T ++D+ + G
Sbjct: 269 CMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCG 328
Query: 211 RLDDAYNLIRTMPIKPNHAVWGALL 235
++ A + + + + A W +L+
Sbjct: 329 CIETALEVFYEIK-ERDTASWTSLI 352
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 131/271 (48%), Gaps = 10/271 (3%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N +L + + LF ++ + + PDN T +L + L + + +H Y +
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
++G + V++ L+ +Y+ G + H +F+ +P +D++ W+ +I++Y +G E A
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMP--QRDVVSWNGLISSYVGNGRFEDA 131
Query: 146 VSLFNEMVQ-SGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIID 204
+ +F M Q S +K ++ T S L ACS + ++ G +++F++ + V ++D
Sbjct: 132 IGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMS-VRIGNALVD 190
Query: 205 LLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEP-ENTG 263
+ + G LD A + +M K N W +++ VS ++ AR FE P ++
Sbjct: 191 MFCKCGCLDKARAVFDSMRDK-NVKCWTSMVFGYVSTGRID----EARVLFERSPVKDVV 245
Query: 264 NYILLANLYAAVGRWRDVEKVRDMVNEVGLR 294
+ + N Y R+ + ++ + G+R
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTAGIR 276
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC C + ++F + ++ TA W +++ G N ++ A+ L+ +M V+ D T
Sbjct: 323 MYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAIT 382
Query: 61 FNSLLPAYAILADLKQAMNI-HCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F ++L A + + I H R + E S L+D+ + G L A + + +
Sbjct: 383 FVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKM 442
Query: 120 PLKDKDII--IWSAIIAAYGKHGHGEMA 145
+ + + ++ ++++A +G+ ++A
Sbjct: 443 RGESDETLVPVYCSLLSAARNYGNVKIA 470
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 167/304 (54%), Gaps = 22/304 (7%)
Query: 14 MFMKTSKKRTAP----WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYA 69
MF++ P W +++G + N + EAI ++M ++P+ + L A A
Sbjct: 498 MFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACA 557
Query: 70 ILADLKQAMNIHCYLIRS---GFLYRLEVASILVDIYSKCGSLGYAHHIF-----NIIPL 121
LA L IH Y+IR+ L +E + LVD+Y+KCG + A +F + +PL
Sbjct: 558 HLASLHIGRTIHGYIIRNLQHSSLVSIETS--LVDMYAKCGDINKAEKVFGSKLYSELPL 615
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
+ A+I+AY +G+ + A++L+ + G+KP+ +T T+VL AC+H G +++ +
Sbjct: 616 SN-------AMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAI 668
Query: 182 SLFQFML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+F ++ K + P ++HY ++DLL AG + A LI MP KP+ + +L+ +C
Sbjct: 669 EIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNK 728
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
EL + +R E EPEN+GNY+ ++N YA G W +V K+R+M+ GL+K P S
Sbjct: 729 QRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCS 788
Query: 301 LVEV 304
+++
Sbjct: 789 WIQI 792
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 142/287 (49%), Gaps = 9/287 (3%)
Query: 5 CNCGNLSYK--MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFN 62
C G + Y +F + +K WN ++SG++ L +AI + + M +E ++ D T
Sbjct: 320 CKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLA 379
Query: 63 SLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK 122
+L+ A A +LK + CY IR F + +AS ++D+Y+KCGS+ A +F+
Sbjct: 380 TLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFD--STV 437
Query: 123 DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLS 182
+KD+I+W+ ++AAY + G A+ LF M GV PN +T+ ++ + G VDE
Sbjct: 438 EKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKD 497
Query: 183 LFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALLGACV 239
+F M IIP + +T +++ + + G ++A +R M ++PN L AC
Sbjct: 498 MFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACA 557
Query: 240 SHENVELGEVAARWTFELEPENTGNYI--LLANLYAAVGRWRDVEKV 284
++ +G + ++ I L ++YA G EKV
Sbjct: 558 HLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKV 604
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 152/334 (45%), Gaps = 51/334 (15%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YAKC+ ++ +F K + W A++ L A+ F +ML ++ PDN
Sbjct: 117 YAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVV 176
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
++ A L + +H Y+++SG + VAS L D+Y KCG L A +F+ IP
Sbjct: 177 PNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIP- 235
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE-- 179
D++ + W+A++ Y ++G E A+ LF++M + GV+P +VT ++ L A +++G V+E
Sbjct: 236 -DRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGK 294
Query: 180 -----------------GLSLFQFMLKHHIIPLVD------------HYTCIIDLLGRAG 210
G SL F K +I + + II + G
Sbjct: 295 QSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQG 354
Query: 211 RLDDAY---NLIRTMPIKPNHAVWGALLGACVSHENVELGEVAA----RWTFELEPENTG 263
++DA L+R +K + L+ A EN++LG+ R +FE +
Sbjct: 355 LVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESD----- 409
Query: 264 NYILLA----NLYAAVGRWRDVEKVRDMVNEVGL 293
I+LA ++YA G D +KV D E L
Sbjct: 410 --IVLASTVMDMYAKCGSIVDAKKVFDSTVEKDL 441
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 116/237 (48%), Gaps = 3/237 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC + + K+F + + WNA++ G++ N EAI+LF M + V+P T
Sbjct: 217 MYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVT 276
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
++ L A A + +++ H I +G + + L++ Y K G + YA +F+
Sbjct: 277 VSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFD--R 334
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ +KD++ W+ II+ Y + G E A+ + M +K + VT +++ A + + G
Sbjct: 335 MFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLG 394
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+ + ++H + + ++D+ + G + DA + + ++ + +W LL A
Sbjct: 395 KEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDS-TVEKDLILWNTLLAA 450
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 5/208 (2%)
Query: 30 LSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGF 89
+S N +EA+ L +M +++ + +L DL IH ++++G
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGD 101
Query: 90 LY-RLE-VASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVS 147
Y R E + + LV Y+KC +L A +F+ L+ +++ W+AII + G E A+
Sbjct: 102 FYARNEYIETKLVIFYAKCDALEIAEVLFS--KLRVRNVFSWAAIIGVKCRIGLCEGALM 159
Query: 148 LFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLG 207
F EM+++ + P+ +V AC + G + +++K + V + + D+ G
Sbjct: 160 GFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYG 219
Query: 208 RAGRLDDAYNLIRTMPIKPNHAVWGALL 235
+ G LDDA + +P + N W AL+
Sbjct: 220 KCGVLDDASKVFDEIPDR-NAVAWNALM 246
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 169/306 (55%), Gaps = 11/306 (3%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y C+ + + + + K + ++SG H + EAI +F M D P+ T
Sbjct: 373 YTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHM--RDT-PNAITV 429
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGF-LYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
SLL A ++ ADL+ + H IR + + V + +VD Y+KCG++ A F+ I
Sbjct: 430 ISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQIT 489
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+K+II W+ II+AY +G + A++LF+EM Q G PN VT+ + L AC+H GLV +G
Sbjct: 490 --EKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKG 547
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP--IKPNHAVWGALLGAC 238
L +F+ M++ P + HY+CI+D+L RAG +D A LI+ +P +K + WGA+L C
Sbjct: 548 LMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGC 607
Query: 239 VSH--ENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKL 296
+ + + EV A ELEP + Y+L ++ +AA W DV +R +V E +R +
Sbjct: 608 RNRFKKLIITSEVVAE-VLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVV 666
Query: 297 PAQSLV 302
S+V
Sbjct: 667 AGYSMV 672
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 142/315 (45%), Gaps = 41/315 (13%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNATFNSLLPAYAIL 71
K+F + S++ W+ V+ ++ + ++LFK+M+ E +PD T S+L A ++
Sbjct: 180 KLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVM 239
Query: 72 ADLKQAMNIHCYLIRSGF-LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
D+ ++H + IR GF L + V + L+D+YSK + A +F+ ++I+ W+
Sbjct: 240 EDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTC--RNIVSWN 297
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACS-----------HVGLVDE 179
+I+A + + + A+ +F+ MVQ V+ ++VT S+L C H ++
Sbjct: 298 SILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRR 357
Query: 180 G-----LSLFQFMLKHHIIPLVDHYTCIIDL---------------LGRAGRLDDAYNLI 219
G ++L + + LVD ++D L AGR D+A ++
Sbjct: 358 GYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIF 417
Query: 220 RTMPIKPNHAVWGALLGACVSHENVELGE----VAARWTFELEPENTGNYILLANLYAAV 275
M PN +LL AC ++ + +A R + + + G I+ A YA
Sbjct: 418 CHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDA--YAKC 475
Query: 276 GRWRDVEKVRDMVNE 290
G + D + E
Sbjct: 476 GAIEMARRTFDQITE 490
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 120/245 (48%), Gaps = 12/245 (4%)
Query: 6 NCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNS 63
CG+L + F + + + WN ++ G + E + F ++ V +P+ +T
Sbjct: 73 KCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTL-- 130
Query: 64 LLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD 123
+L +A + IH Y+IRSGF V + ++ +Y+ SL A +F+ + +
Sbjct: 131 VLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFD--EMSE 187
Query: 124 KDIIIWSAIIAAYGKHGHGEMAVSLFNEMV-QSGVKPNQVTFTSVLHACSHVGLVDEGLS 182
+D+I WS +I +Y + + + LF EMV ++ +P+ VT TSVL AC+ + +D G S
Sbjct: 188 RDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRS 247
Query: 183 LFQFMLKHHIIPLVDHYTC--IIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ F ++ L D + C +ID+ + +D A+ + + N W ++L V
Sbjct: 248 VHGFSIRRG-FDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCR-NIVSWNSILAGFVH 305
Query: 241 HENVE 245
++ +
Sbjct: 306 NQRYD 310
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 89/172 (51%), Gaps = 5/172 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+K + ++++F +T+ + WN++L+GF+HN EA+++F M+ E V+ D T
Sbjct: 271 MYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVT 330
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
SLL +IH +IR G+ S L+D Y+ C + A + +
Sbjct: 331 VVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLD--S 388
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACS 172
+ KD++ S +I+ G + A+S+F M + PN +T S+L+ACS
Sbjct: 389 MTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACS 437
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 155/292 (53%), Gaps = 8/292 (2%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F + + WN +++G+ N + +AI F M E +PD T +S+L A A
Sbjct: 230 IFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGR 289
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
L +H + G V++ L+D+Y+KCG L A +F I ++ + +++I
Sbjct: 290 LDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRS--VACCNSMI 347
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHII 193
+ HG G+ A+ +F+ M +KP+++TF +VL AC H G + EGL +F M +
Sbjct: 348 SCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVK 407
Query: 194 PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARW 253
P V H+ C+I LLGR+G+L +AY L++ M +KPN V GALLGAC H + E+ E +
Sbjct: 408 PNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMK- 466
Query: 254 TFELEPENTGNY-----ILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
E T +Y ++NLYA RW+ E +R + + GL K P S
Sbjct: 467 IIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 120/256 (46%), Gaps = 38/256 (14%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC C + K+F + ++ A WNA++ G++ N A A LF+++ V + T
Sbjct: 90 MYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEI---SVCRNTVT 146
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGF-LYRLEVASILVDIYSKCGSLGYAHHIFNII 119
+ ++ Y ++++A + R F L ++ S+++ +Y + A F I
Sbjct: 147 WIEMIKGYGKRIEIEKAREL---FERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDI 203
Query: 120 PLKD-----------------------------KDIIIWSAIIAAYGKHGHGEMAVSLFN 150
P K+ +D++IW+ +IA Y ++G+ + A+ F
Sbjct: 204 PEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFF 263
Query: 151 EMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYT-CIIDLLGRA 209
M G +P+ VT +S+L AC+ G +D G + ++ H I L + +ID+ +
Sbjct: 264 NMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHS-LINHRGIELNQFVSNALIDMYAKC 322
Query: 210 GRLDDAYNLIRTMPIK 225
G L++A ++ ++ ++
Sbjct: 323 GDLENATSVFESISVR 338
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 14/161 (8%)
Query: 80 IHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKH 139
+H I+ G + V S L+ +Y KCG + A +F+ +P ++++ W+A+I Y +
Sbjct: 68 LHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMP--ERNVATWNAMIGGYMSN 125
Query: 140 GHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQ---FMLKHHIIPLV 196
G +A LF E+ V N VT+ ++ +++ LF+ F LK+ V
Sbjct: 126 GDAVLASGLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKN-----V 177
Query: 197 DHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
++ ++ + +++DA +P K N VW ++
Sbjct: 178 KAWSVMLGVYVNNRKMEDARKFFEDIPEK-NAFVWSLMMSG 217
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 154/307 (50%), Gaps = 7/307 (2%)
Query: 1 MYAKCNCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
MY+ CGNL + +F + W+ ++ G+ E + F M +P +
Sbjct: 354 MYS--TCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTD 411
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
SLL +A ++ +H + G V S L+++YSKCGS+ A IF
Sbjct: 412 FALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFG- 470
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
DI+ +A+I Y +HG + A+ LF + ++ G +P+ VTF SVL AC+H G +D
Sbjct: 471 -ETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLD 529
Query: 179 EGLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
G F M + +++ P +HY C++DLL RAGRL DA +I M K + VW LL A
Sbjct: 530 LGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIA 589
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
C + ++E G AA EL+P + LAN+Y++ G + VR + G+ K P
Sbjct: 590 CKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEP 649
Query: 298 AQSLVEV 304
S +++
Sbjct: 650 GWSSIKI 656
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 89/174 (51%), Gaps = 2/174 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY + + S ++F + + W A+++G +H +E + F +M + D T
Sbjct: 152 MYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYT 211
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F L A A L +K IH ++I GF+ L VA+ L +Y++CG + +F
Sbjct: 212 FAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFE--N 269
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHV 174
+ ++D++ W+++I AY + G AV F +M S V PN+ TF S+ AC+ +
Sbjct: 270 MSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASL 323
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 123/285 (43%), Gaps = 48/285 (16%)
Query: 6 NCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED--VQPDNATF 61
N GNL + ++F K W +++ ++ + + EA+ LF M V D V PD +
Sbjct: 52 NAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVL 111
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+ +L A +++ ++H Y +++ L + V S L+D+Y + G + + +F+ +P
Sbjct: 112 SVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPF 171
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHAC---------- 171
++ + W+AII G + ++ F+EM +S + TF L AC
Sbjct: 172 RNA--VTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGK 229
Query: 172 ---SHV----------------------GLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLL 206
+HV G + +GL LF+ M + ++ +T +I
Sbjct: 230 AIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVS----WTSLIVAY 285
Query: 207 GRAG---RLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGE 248
R G + + + +R + PN + ++ AC S + GE
Sbjct: 286 KRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGE 330
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 160/289 (55%), Gaps = 9/289 (3%)
Query: 20 KKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMN 79
++ TA WN +++G+I N EA++LF++M P++ T SLLPA A L K
Sbjct: 486 QRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVRE 545
Query: 80 IHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKH 139
IH ++R V + L D Y+K G + Y+ IF + ++ KDII W+++I Y H
Sbjct: 546 IHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIF--LGMETKDIITWNSLIGGYVLH 603
Query: 140 GHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK-HHIIPLVDH 198
G A++LFN+M G+ PN+ T +S++ A +G VDEG +F + +HIIP ++H
Sbjct: 604 GSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEH 663
Query: 199 YTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELE 258
+ ++ L GRA RL++A I+ M I+ +W + L C H ++++ AA F LE
Sbjct: 664 CSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLE 723
Query: 259 PENTGNYILLANLY---AAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
PENT +++ +Y A +GR + K R + L+K QS +EV
Sbjct: 724 PENTATESIVSQIYALGAKLGRSLEGNKPR---RDNLLKKPLGQSWIEV 769
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 146/295 (49%), Gaps = 12/295 (4%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC C + K+F ++ W+A++ + + RE +LF+ M+ + V PD+
Sbjct: 124 MYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFL 183
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F +L A D++ IH +I+ G L V++ ++ +Y+KCG L +A F
Sbjct: 184 FPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFR--R 241
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++++D+I W++++ AY ++G E AV L EM + G+ P VT+ ++ + +G D
Sbjct: 242 MRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAA 301
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGA 237
+ L Q M I V +T +I L G A ++ R M + PN + + A
Sbjct: 302 MDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSA 361
Query: 238 C----VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMV 288
C V ++ E+ +A + F ++ GN L ++Y+ G+ D KV D V
Sbjct: 362 CSCLKVINQGSEVHSIAVKMGF-IDDVLVGNS--LVDMYSKCGKLEDARKVFDSV 413
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 113/219 (51%), Gaps = 6/219 (2%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
W A++SG IHN + +A+ +F++M + V P+ T S + A + L + Q +H +
Sbjct: 320 WTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAV 379
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
+ GF+ + V + LVD+YSKCG L A +F+ + K+KD+ W+++I Y + G+ A
Sbjct: 380 KMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV--KNKDVYTWNSMITGYCQAGYCGKA 437
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPL-VDHYTCIID 204
LF M + ++PN +T+ +++ G E + LFQ M K + + II
Sbjct: 438 YELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIA 497
Query: 205 LLGRAGRLDDAYNLIRTMPIK---PNHAVWGALLGACVS 240
+ G+ D+A L R M PN +LL AC +
Sbjct: 498 GYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACAN 536
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 33/238 (13%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YAKC + + K F + ++ WN+VL + N EA++L K+M E + P T
Sbjct: 225 VYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVT 284
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+N L+ Y L AM++ + ++E I D+++
Sbjct: 285 WNILIGGYNQLGKCDAAMDL---------MQKMETFGITADVFT---------------- 319
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
W+A+I+ +G A+ +F +M +GV PN VT S + ACS + ++++G
Sbjct: 320 --------WTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQG 371
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
+ +K I V ++D+ + G+L+DA + ++ K + + G C
Sbjct: 372 SEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYC 429
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 6/166 (3%)
Query: 95 VASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ 154
V + L+ +Y+KCG + A +F+ ++++++ WSA+I AY + LF M++
Sbjct: 117 VETKLLSMYAKCGCIADARKVFD--SMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMK 174
Query: 155 SGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDD 214
GV P+ F +L C++ G V+ G + ++K + + I+ + + G LD
Sbjct: 175 DGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDF 234
Query: 215 AYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPE 260
A R M + A LL C + ++ E E+ E+E E
Sbjct: 235 ATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVK----EMEKE 276
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 69/147 (46%), Gaps = 4/147 (2%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YAK S +F+ K WN+++ G++ + A+ LF QM + + P+ T
Sbjct: 569 YAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTL 628
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGF--LYRLEVASILVDIYSKCGSLGYAHHIFNII 119
+S++ A+ ++ ++ + + Y I + + + LE S +V +Y + L A +
Sbjct: 629 SSIILAHGLMGNVDEGKKVF-YSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEM 687
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAV 146
++ + IW + + HG +MA+
Sbjct: 688 NIQS-ETPIWESFLTGCRIHGDIDMAI 713
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 163/306 (53%), Gaps = 7/306 (2%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLARE--AIQLFKQMLVEDVQPDNA 59
YA + ++ + ++ + ++++ F N L + A+ + M + ++ D
Sbjct: 472 YASSRKVDYAWNVIRSMKRRDNITYTSLVTRF--NELGKHEMALSVINYMYGDGIRMDQL 529
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
+ + A A L L+ ++HCY ++SGF V + LVD+YSKCGSL A +F I
Sbjct: 530 SLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEI 589
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
D++ W+ +++ +G A+S F EM +P+ VTF +L ACS+ L D
Sbjct: 590 A--TPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDL 647
Query: 180 GLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
GL FQ M K ++I P V+HY ++ +LGRAGRL++A ++ TM +KPN ++ LL AC
Sbjct: 648 GLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRAC 707
Query: 239 VSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPA 298
N+ LGE A L P + YILLA+LY G+ +K R+++ E L K
Sbjct: 708 RYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLG 767
Query: 299 QSLVEV 304
+S VEV
Sbjct: 768 KSTVEV 773
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 3/203 (1%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
W +V+SGF+ N A+EA+ F +M +QP+N T++++L + + L IH I
Sbjct: 293 WTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTI 352
Query: 86 RSGFLYRLEVASILVDIYSKC-GSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEM 144
+ GF +V + LVD+Y KC S A +F + +++ W+ +I HG +
Sbjct: 353 KVGFEDSTDVGNALVDMYMKCSASEVEASRVFG--AMVSPNVVSWTTLILGLVDHGFVQD 410
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIID 204
L EMV+ V+PN VT + VL ACS + V L + ++L+ H+ + ++D
Sbjct: 411 CFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVD 470
Query: 205 LLGRAGRLDDAYNLIRTMPIKPN 227
+ ++D A+N+IR+M + N
Sbjct: 471 AYASSRKVDYAWNVIRSMKRRDN 493
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 134/284 (47%), Gaps = 37/284 (13%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F + S + W ++S F + A+ LF++M+ P+ TF+S++ + A L
Sbjct: 79 KLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLR 138
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
D+ +H +I++GF V S L D+YSKCG A +F+ L++ D I W+ +
Sbjct: 139 DISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFS--SLQNADTISWTMM 196
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
I++ A+ ++EMV++GV PN+ TF +L A S +GL + G ++ ++ I
Sbjct: 197 ISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-EFGKTIHSNIIVRGI 255
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLI--------------------------------- 219
V T ++D + +++DA ++
Sbjct: 256 PLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLE 315
Query: 220 -RTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENT 262
R++ ++PN+ + A+L C + +++ G+ T ++ E++
Sbjct: 316 MRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDS 359
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 134/292 (45%), Gaps = 15/292 (5%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y+KC + ++F T W ++S + REA+Q + +M+ V P+ T
Sbjct: 168 LYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFT 227
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F LL A + L L+ IH +I G + + + LVD YS+ + A + N
Sbjct: 228 FVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLN--S 284
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++D+ +W+++++ + ++ + AV F EM G++PN T++++L CS V +D G
Sbjct: 285 SGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFG 344
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ +K D ++D+ + + + + + PN W L+ V
Sbjct: 345 KQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVD 404
Query: 241 HENVE-----LGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDM 287
H V+ L E+ R E+EP N + L+ + A + R V +V ++
Sbjct: 405 HGFVQDCFGLLMEMVKR---EVEP----NVVTLSGVLRACSKLRHVRRVLEI 449
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 157/276 (56%), Gaps = 5/276 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQ-PDNATFNSLLPAYAIL 71
++F S+K W A+ G+++ ++L + + + PD+ S+L A ++
Sbjct: 347 RLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQ 406
Query: 72 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
A ++ IH + +R+G L ++ + VD+YSKCG++ YA IF+ ++D ++++A
Sbjct: 407 AYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFD--SSFERDTVMYNA 464
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK-H 190
+IA HGH + F +M + G KP+++TF ++L AC H GLV EG F+ M++ +
Sbjct: 465 MIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAY 524
Query: 191 HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM-PIKPNHAVWGALLGACVSHENVELGEV 249
+I P HYTC+IDL G+A RLD A L+ + ++ + + GA L AC ++N EL +
Sbjct: 525 NISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKE 584
Query: 250 AARWTFELEPENTGNYILLANLYAAVGRWRDVEKVR 285
+E N YI +AN YA+ GRW +++++R
Sbjct: 585 VEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIR 620
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 106/249 (42%), Gaps = 31/249 (12%)
Query: 23 TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHC 82
T WN +++G+ N EA+++ M ++ D +F ++L + L LK +H
Sbjct: 225 TISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHA 284
Query: 83 YLIRSGFLYRLEVASILVDIYSKCGSLGY---AHHIFN---------------------- 117
++++G V+S +VD+Y KCG++ Y AH ++
Sbjct: 285 RVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVE 344
Query: 118 ----IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVK-PNQVTFTSVLHACS 172
L +K++++W+A+ Y + + L + + P+ + SVL ACS
Sbjct: 345 AKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACS 404
Query: 173 HVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWG 232
++ G + L+ I+ T +D+ + G ++ A + + + + ++
Sbjct: 405 LQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDS-SFERDTVMYN 463
Query: 233 ALLGACVSH 241
A++ C H
Sbjct: 464 AMIAGCAHH 472
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 108/248 (43%), Gaps = 37/248 (14%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRT-APWNAVLSGFIH-NSLAREAIQLFKQM---LVEDVQP 56
Y K N + ++F + +R +N +LSGF + EAI++F +M +D+
Sbjct: 64 YVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWI 123
Query: 57 DNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 116
D+ T +++ A L ++ +H L+++G S L+ +YSKCG +IF
Sbjct: 124 DDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIF 183
Query: 117 N--IIPLKDK------------------------------DIIIWSAIIAAYGKHGHGEM 144
N + D D I W+ +IA Y ++G+ E
Sbjct: 184 NGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEE 243
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIID 204
A+ + M ++G+K ++ +F +VL+ S + + G + +LK+ + I+D
Sbjct: 244 ALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVD 303
Query: 205 LLGRAGRL 212
+ + G +
Sbjct: 304 VYCKCGNM 311
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 158/298 (53%), Gaps = 6/298 (2%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
++K+F + K WN ++S ++ + +I LF++M+ Q + +T LL A
Sbjct: 203 AHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGR 262
Query: 71 LADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWS 130
A LK+ ++H LIR+ + + + L+D+Y KC +G A IF+ + +++K + W+
Sbjct: 263 SARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNK--VTWN 320
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML-K 189
+I A+ HG E + LF M+ ++P++VTF VL C+ GLV +G S + M+ +
Sbjct: 321 VMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDE 380
Query: 190 HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALLGACVSHENVEL 246
I P H C+ +L AG ++A ++ +P + P W LL + N L
Sbjct: 381 FQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTL 440
Query: 247 GEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVEV 304
GE A+ E +P N Y LL N+Y+ GRW DV +VR+MV E + ++P LV++
Sbjct: 441 GESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDL 498
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 167 bits (423), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 84/229 (36%), Positives = 129/229 (56%), Gaps = 3/229 (1%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
S K+ + T WN ++ + E I+LFK ML +++PD TF S+L +
Sbjct: 498 SVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSK 557
Query: 71 LADLKQAMNIHCYLIRSGF-LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIW 129
L DL +IH + ++ F V ++L+D+Y KCGS+ +F ++K++I W
Sbjct: 558 LCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFE--ETREKNLITW 615
Query: 130 SAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK 189
+A+I+ G HG+G+ A+ F E + G KP++V+F S+L AC H G+V EG+ LFQ M
Sbjct: 616 TALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKD 675
Query: 190 HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
+ + P +DHY C +DLL R G L +A +LIR MP + VW L C
Sbjct: 676 YGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 123/274 (44%), Gaps = 35/274 (12%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y KC +++ +MF WNA++ + +A++LF M P+ T+
Sbjct: 260 YGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTY 319
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
S+L +++ L IH LI++G + + + L+D Y+KCG+L + F+ I
Sbjct: 320 VSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYI-- 377
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACS--------- 172
+DK+I+ W+A+++ Y G + +SLF +M+Q G +P + TF++ L +C
Sbjct: 378 RDKNIVCWNALLSGYANK-DGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHS 436
Query: 173 ---HVGLVDEGLSLFQFMLKHHIIPLVDHYTCIID----------------LLGRAGRLD 213
+G D L M + L++ ++D + R G+
Sbjct: 437 VIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYH 496
Query: 214 DAYNLIRTMPIKPNHAVWGALLGACVS---HENV 244
++ LI T+ +P+ W + AC HE V
Sbjct: 497 ESVKLISTLE-QPDTVSWNIAIAACSRSDYHEEV 529
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 107/240 (44%), Gaps = 9/240 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y + + ++ ++F K WN ++S H +E + F++++ ++
Sbjct: 158 LYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESS 217
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F +L + + DL + +HC + G + V + L+ Y KCG+ A +F
Sbjct: 218 FLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQ--D 275
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
DI+ W+AII A K + A+ LF M + G PNQ T+ SVL S V L+ G
Sbjct: 276 AGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCG 335
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDA---YNLIRTMPIKPNHAVWGALLGA 237
+ ++K+ + +ID + G L+D+ ++ IR N W ALL
Sbjct: 336 RQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIR----DKNIVCWNALLSG 391
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 116/270 (42%), Gaps = 47/270 (17%)
Query: 2 YAKCNCGNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
YAKC GNL S F K WNA+LSG+ N + LF QML +P
Sbjct: 361 YAKC--GNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEY 417
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGF-----------------------LYRLEVA 96
TF++ L + + +L+Q +H ++R G+ L L+ A
Sbjct: 418 TFSTALKSCCV-TELQQ---LHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWA 473
Query: 97 S---------ILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVS 147
S I+ IYS+ G Y + I L+ D + W+ IAA + + E +
Sbjct: 474 SGPTSVVPLNIVAGIYSRRGQ--YHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIE 531
Query: 148 LFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTC--IIDL 205
LF M+QS ++P++ TF S+L CS + + G S+ + K D + C +ID+
Sbjct: 532 LFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTD-FSCADTFVCNVLIDM 590
Query: 206 LGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
G+ G + + K N W AL+
Sbjct: 591 YGKCGSIRSVMKVFEETREK-NLITWTALI 619
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 13/148 (8%)
Query: 95 VASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ 154
V + ++ +Y K G + A +F+ +P ++K + ++ II Y K+G + A +F+EM
Sbjct: 51 VCNNIISLYEKLGEVSLAGKVFDQMPERNK--VSFNTIIKGYSKYGDVDKAWGVFSEMRY 108
Query: 155 SGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHY--TCIIDLLGRAGRL 212
G PNQ T + +L +C+ + V G L LK+ + + D + TC++ L GR L
Sbjct: 109 FGYLPNQSTVSGLL-SCASLD-VRAGTQLHGLSLKYGLF-MADAFVGTCLLCLYGRLDLL 165
Query: 213 DDAYNLIRTMPIKP----NHAVWGALLG 236
+ A + MP K NH + +LLG
Sbjct: 166 EMAEQVFEDMPFKSLETWNHMM--SLLG 191
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 102/244 (41%), Gaps = 6/244 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y K +L+ K+F + ++ +N ++ G+ +A +F +M P+ +T
Sbjct: 58 LYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQST 117
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSG-FLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
+ LL ++ D++ +H ++ G F+ V + L+ +Y + L A +F +
Sbjct: 118 VSGLLSCASL--DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDM 175
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
P K + W+ +++ G G + + F E+V+ G + +F VL S V +D
Sbjct: 176 PFKSLE--TWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDI 233
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACV 239
L K + + +I G+ G A + + + W A++ A
Sbjct: 234 SKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAG-SWDIVSWNAIICATA 292
Query: 240 SHEN 243
EN
Sbjct: 293 KSEN 296
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KC K+F +T +K W A++S + +EA++ FK+ L +PD +
Sbjct: 590 MYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVS 649
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
F S+L A +K+ M + + G ++ VD+ ++ G L A H+ +P
Sbjct: 650 FISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMP 709
Query: 121 LKDKDIIIWSAII 133
D +W +
Sbjct: 710 FP-ADAPVWRTFL 721
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 161 bits (407), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 170/307 (55%), Gaps = 7/307 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
M++KCN + S K+F + K + N+++ + + +A++LF + + V+PD T
Sbjct: 279 MFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFT 338
Query: 61 FNSLLPAY-AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
F+S+L + A++ D ++H +I+ GF VA+ L+++Y K GS+ A +F
Sbjct: 339 FSSVLSSMNAVMLD--HGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVF--A 394
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS-GVKPNQVTFTSVLHACSHVGLVD 178
KD+I W+ +I ++ ++++FN+++ + +KP++VT +L AC + G V+
Sbjct: 395 KTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVN 454
Query: 179 EGLSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
EG+ +F M K H + P +HY CII+LL R G +++A ++ +P +P+ +W +L A
Sbjct: 455 EGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCA 514
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLP 297
+ + L E A+ E EP+++ Y++L +Y RW + K+R +NE L+
Sbjct: 515 SLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQ 574
Query: 298 AQSLVEV 304
S + +
Sbjct: 575 GSSKISI 581
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 112/230 (48%), Gaps = 7/230 (3%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
N + +F + ++ WN ++SG + I++F M +++P TF+ L
Sbjct: 87 NNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILA--- 143
Query: 69 AILADLKQAMNIHCYLIRSGF-LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDII 127
+++ ++ IH I SG Y L V + ++D+Y + G YA +F + ++D+D++
Sbjct: 144 SLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVF--LTMEDRDVV 201
Query: 128 IWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFM 187
W+ +I + G+ E+A+ F M + ++P++ T + V+ CS + + +G
Sbjct: 202 SWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALC 261
Query: 188 LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
+K + ID+ + RLDD+ L R + K + + +++G+
Sbjct: 262 IKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELE-KWDSVLCNSMIGS 310
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 99/213 (46%), Gaps = 3/213 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY + + + +F+ + WN ++ + A+ F M ++QPD T
Sbjct: 178 MYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYT 237
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ ++ + L +L + I+ GFL V +D++SKC L + +F
Sbjct: 238 VSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFR--E 295
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
L+ D ++ +++I +Y H GE A+ LF + V+P++ TF+SVL + + V ++D G
Sbjct: 296 LEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHG 354
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLD 213
+ ++K T ++++ + G +D
Sbjct: 355 ADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVD 387
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 91/225 (40%), Gaps = 40/225 (17%)
Query: 56 PDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 115
P + F+ L+ + A +H L+ +GF+ + + +Y K GS+ A +
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 116 FNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVG 175
F+ IP DK+ I W+ + K+G+ A+ LF+EM + V V++ +++ G
Sbjct: 62 FDDIP--DKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDV----VSWNTMISGLVSCG 115
Query: 176 LVDEGLSLFQFMLKHHIIP-------LVDHYTC--------------------------I 202
+ G+ +F M + I P L TC +
Sbjct: 116 FHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSV 175
Query: 203 IDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 247
+D+ R G D A ++ TM + + W L+ +C N E+
Sbjct: 176 MDMYRRLGVFDYALSVFLTMEDR-DVVSWNCLILSCSDSGNKEVA 219
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 146/303 (48%), Gaps = 36/303 (11%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAK + + K+F +K W A+++G HN EA++LF M V + PD
Sbjct: 373 MYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIV 432
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A A L L+ +H I+SGF L V + LV +Y+KCGSL A+ IFN +
Sbjct: 433 TASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSME 492
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
++D +I W+ +I Y K+G E A F+ M
Sbjct: 493 IRD--LITWTCLIVGYAKNGLLEDAQRYFDSMRTV------------------------- 525
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
+ I P +HY C+IDL GR+G L+ M ++P+ VW A+L A
Sbjct: 526 ---------YGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRK 576
Query: 241 HENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQS 300
H N+E GE AA+ ELEP N Y+ L+N+Y+A GR + VR ++ + K P S
Sbjct: 577 HGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCS 636
Query: 301 LVE 303
VE
Sbjct: 637 WVE 639
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 115/229 (50%), Gaps = 2/229 (0%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
K+F K T WNA++SG+ + EA LF +M + ++P+ T S+L L
Sbjct: 80 KLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLV 139
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
L + IH + I++GF + V + L+ +Y++C + A ++F + +K+ + W+++
Sbjct: 140 LLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETME-GEKNNVTWTSM 198
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
+ Y ++G A+ F ++ + G + NQ TF SVL AC+ V G+ + ++K
Sbjct: 199 LTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGF 258
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
+ + +ID+ + ++ A L+ M + + W +++ CV
Sbjct: 259 KTNIYVQSALIDMYAKCREMESARALLEGMEVD-DVVSWNSMIVGCVRQ 306
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 142/335 (42%), Gaps = 53/335 (15%)
Query: 1 MYAKCN-CGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
MYA+C Y +K W ++L+G+ N A +AI+ F+ + E Q +
Sbjct: 169 MYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQY 228
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
TF S+L A A ++ + + +HC +++SGF + V S L+D+Y+KC + A + +
Sbjct: 229 TFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGM 288
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLH---------- 169
+ D++ W+++I + G A+S+F M + +K + T S+L+
Sbjct: 289 EV--DDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMK 346
Query: 170 --ACSHV------------------------GLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
+ +H G++D L +F+ M++ +I +T ++
Sbjct: 347 IASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVIS----WTALV 402
Query: 204 DLLGRAGRLDDAYNL---IRTMPIKPNHAVWGALLGACVSHENVELG-EVAARWTFELEP 259
G D+A L +R I P+ V ++L A +E G +V + P
Sbjct: 403 TGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFP 462
Query: 260 ENTGNYILLANLYAAVGRWRDVE------KVRDMV 288
+ L +Y G D ++RD++
Sbjct: 463 SSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLI 497
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 151/301 (50%), Gaps = 11/301 (3%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY KCN S ++ N++++ +H + ++ I++F M+ E D T
Sbjct: 360 MYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVT 419
Query: 61 FNSLLPAYAIL--ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
+++L A ++ L +HC I+SG+ + V+ L+D Y+K G + +F+
Sbjct: 420 LSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFD- 478
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
L +I ++II Y ++G G V + EM + + P++VT SVL CSH GLV+
Sbjct: 479 -ELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVE 537
Query: 179 EGLSLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
EG +F + K+ I P Y C++DLLGRAG ++ A L+ + W +LL +
Sbjct: 538 EGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQS 597
Query: 238 CVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRW------RDVEKVRDMVNEV 291
C H N +G AA LEPEN YI ++ Y +G + R++ R+++ E+
Sbjct: 598 CRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREI 657
Query: 292 G 292
G
Sbjct: 658 G 658
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 116/225 (51%), Gaps = 4/225 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+YA +++ K+F + + A N +L F ++ +++ +M +E V + T
Sbjct: 156 LYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLT 215
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGF-LYRLEVASILVDIYSKCGSLGYAHHIFNII 119
+ ++ + + + +H +++SG+ + + VA++LVD YS CG L + FN +
Sbjct: 216 YCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAV 275
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
P +KD+I W++I++ +G ++ LF++M G +P+ F S L+ CS +
Sbjct: 276 P--EKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQS 333
Query: 180 GLSLFQFMLKHHI-IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP 223
G + ++LK + + + +ID+ G+ ++++ L +++P
Sbjct: 334 GKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLP 378
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 116/249 (46%), Gaps = 24/249 (9%)
Query: 8 GNL--SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLL 65
GNL +++ F + S + +N ++SG + AI+L+ +M+ ++ +TF S+L
Sbjct: 60 GNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVL 119
Query: 66 PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKD 125
+ ++ + +HC +I GF + V S LV +Y+ + A +F+ + D++
Sbjct: 120 SVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFD--EMLDRN 177
Query: 126 IIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQ 185
+ + + ++ + + G + ++ M GV N +T+ ++ CSH LV EG L
Sbjct: 178 LAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHS 237
Query: 186 FMLK-----HHII---PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAV--WGALL 235
++K +I LVD+Y+ DL G +R+ P V W +++
Sbjct: 238 LVVKSGWNISNIFVANVLVDYYSACGDLSGS----------MRSFNAVPEKDVISWNSIV 287
Query: 236 GACVSHENV 244
C + +V
Sbjct: 288 SVCADYGSV 296
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 83/169 (49%), Gaps = 5/169 (2%)
Query: 7 CGNLSYKM--FMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSL 64
CG+LS M F +K WN+++S +++ LF +M +P F S
Sbjct: 262 CGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSF 321
Query: 65 LPAYAILADLKQAMNIHCYLIRSGF-LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD 123
L + +D++ IHCY+++ GF + L V S L+D+Y KC + + ++ +P +
Sbjct: 322 LNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLN 381
Query: 124 KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACS 172
+ ++++ + G + + +F M+ G ++VT ++VL A S
Sbjct: 382 LE--CCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALS 428
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 149/280 (53%), Gaps = 6/280 (2%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+++ G+ N L +A+ LF + L E + D + +L L + IHCY +
Sbjct: 489 TSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYAL 548
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
++G+ + + + L+ +Y+KC A IFN +++ D+I W+++I+ Y +G+ A
Sbjct: 549 KAGYFSDISLGNSLISMYAKCCDSDDAIKIFNT--MREHDVISWNSLISCYILQRNGDEA 606
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHV--GLVDEGLSLFQFMLK-HHIIPLVDHYTCI 202
++L++ M + +KP+ +T T V+ A + + LF M + I P +HYT
Sbjct: 607 LALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAF 666
Query: 203 IDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENT 262
+ +LG G L++A + I +MP++P +V ALL +C H N + + A+ +PE
Sbjct: 667 VRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETP 726
Query: 263 GNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLV 302
YIL +N+Y+A G W E +R+ + E G RK PA+S +
Sbjct: 727 SEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWI 766
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 133/281 (47%), Gaps = 12/281 (4%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
++F ++K T +NA+++GF N +A++LF ML V+ + + S + A +++
Sbjct: 372 EIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVS 431
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
+ K + IH + I+ G + + + L+D+ ++C + A +F+ P ++I
Sbjct: 432 EKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSI 491
Query: 133 IAAYGKHGHGEMAVSLFNE-MVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH 191
I Y ++G + AVSLF+ + + + ++V+ T +L C +G + G + + LK
Sbjct: 492 IGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAG 551
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAV--WGALLGACVSHENVELGEV 249
+ +I + + DDA + TM H V W +L+ + N + E
Sbjct: 552 YFSDISLGNSLISMYAKCCDSDDAIKIFNTM---REHDVISWNSLISCYILQRNGD--EA 606
Query: 250 AARWTFELEPENTGNYILLANLYAAVGRWRDVEKV---RDM 287
A W+ E E + I L + +A R+ + K+ RD+
Sbjct: 607 LALWSRMNEKEIKPDIITLTLVISAF-RYTESNKLSSCRDL 646
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 89/174 (51%), Gaps = 6/174 (3%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNATFNSLLPAYAILA 72
+F+ S + A++SGF +L EA+++F +M VQP+ TF ++L A ++
Sbjct: 136 VFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVS 195
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSK--CGSLGYAHHIFNIIPLKDKDIIIWS 130
+ IH +++SGFL + V++ L+ +Y K S +F+ IP +D+ W+
Sbjct: 196 RFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIP--QRDVASWN 253
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSVLHACSHVGLVDEGLSL 183
++++ K G A LF EM + G + T +++L +C+ ++ G L
Sbjct: 254 TVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGREL 307
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 165/300 (55%), Gaps = 7/300 (2%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
N ++++ ++ WN +L+G++++ + EA + F +M V+ D + + +L A
Sbjct: 271 NNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAV 330
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIII 128
A LA + IH + G R+ VAS L+D+YSKCG L +A +F +P K++I+
Sbjct: 331 AALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMP--RKNLIV 388
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSG-VKPNQVTFTSVLHACSHVGLVDE-GLSLFQF 186
W+ +I+ Y ++G A+ LFN++ Q +KP++ TF ++L CSH + E L F+
Sbjct: 389 WNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEM 448
Query: 187 ML-KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVE 245
M+ ++ I P V+H +I +G+ G + A +I+ + W ALLGAC + ++++
Sbjct: 449 MINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLK 508
Query: 246 LGEVAARWTFELEPENTGN--YILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLVE 303
+ A EL + YI+++NLYA RWR+V ++R ++ E G+ K S ++
Sbjct: 509 AAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWID 568
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 132/277 (47%), Gaps = 17/277 (6%)
Query: 19 SKKRTAPWNAV---LSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLK 75
S + W+ + L+ F + R A++L + +PD + LL +
Sbjct: 17 STASSNSWSTIVPALARFGSIGVLRAAVELIN----DGEKPDASPLVHLLRVSGNYGYVS 72
Query: 76 QAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAA 135
+H Y+ + GF+ +++ L+ Y SL AH +F+ +P D D+I W+++++
Sbjct: 73 LCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMP--DPDVISWNSLVSG 130
Query: 136 YGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPL 195
Y + G + + LF E+ +S V PN+ +FT+ L AC+ + L G + ++K +
Sbjct: 131 YVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKG 190
Query: 196 -VDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWT 254
V C+ID+ G+ G +DDA + + M K + W A++ +C + +ELG W
Sbjct: 191 NVVVGNCLIDMYGKCGFMDDAVLVFQHMEEK-DTVSWNAIVASCSRNGKLELG----LWF 245
Query: 255 FELEPE-NTGNYILLANLYAAVGRWRDVEKV-RDMVN 289
F P +T Y L + + G + + +V DM N
Sbjct: 246 FHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPN 282
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 106/233 (45%), Gaps = 43/233 (18%)
Query: 11 SYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI 70
++K+F + WN+++SG++ + +E I LF ++ DV P+ +F + L A A
Sbjct: 109 AHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACAR 168
Query: 71 LADLKQAMNIHCYLIRSGFLY-RLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIW 129
L IH L++ G + V + L+D+Y KCG + A +F +++KD + W
Sbjct: 169 LHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQ--HMEEKDTVSW 226
Query: 130 SAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK 189
+AI+A+ ++G E+ + F++M PN T T
Sbjct: 227 NAIVASCSRNGKLELGLWFFHQM------PNPDTVT------------------------ 256
Query: 190 HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHE 242
Y +ID ++G ++A+ ++ MP PN + W +L V+ E
Sbjct: 257 ---------YNELIDAFVKSGDFNNAFQVLSDMP-NPNSSSWNTILTGYVNSE 299
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 127/216 (58%), Gaps = 4/216 (1%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
+F + + W A+++ ++ N EA QLF++M V+DV+P+ T +LL A L
Sbjct: 207 VFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGS 266
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
L +H Y ++GF+ + + L+D+YSKCGSL A +F++ ++ K + W+++I
Sbjct: 267 LSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDV--MQGKSLATWNSMI 324
Query: 134 AAYGKHGHGEMAVSLF-NEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK-HH 191
+ G HG GE A+SLF ++ V+P+ +TF VL AC++ G V +GL F M++ +
Sbjct: 325 TSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYG 384
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPN 227
I P+ +H C+I LL +A ++ A NL+ +M P+
Sbjct: 385 ISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 112/260 (43%), Gaps = 35/260 (13%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVE-DVQPDNATFNSLLPAYAILA 72
+F + T WN ++ N REA+ LF M++ Q D TF ++ A +
Sbjct: 74 VFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASS 133
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCG------------------------- 107
++ +H I++GF + + L+D+Y KCG
Sbjct: 134 SIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLY 193
Query: 108 ------SLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQ 161
L A +FN +P+ ++++ W+A+I AY K+ + A LF M VKPN+
Sbjct: 194 GLVSNSQLDSAEIVFNQMPM--RNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNE 251
Query: 162 VTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRT 221
T ++L A + +G + G + + K+ + T +ID+ + G L DA +
Sbjct: 252 FTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDV 311
Query: 222 MPIKPNHAVWGALLGACVSH 241
M K + A W +++ + H
Sbjct: 312 MQGK-SLATWNSMITSLGVH 330
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 137 bits (345), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 120/219 (54%), Gaps = 3/219 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY+KC ++F + ++ W A++ ++ N R I++F+ ML+ +PD+ T
Sbjct: 462 MYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVT 521
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L + L LK +H ++++ F V++ ++ +Y KCG L A+ F+ +
Sbjct: 522 MGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVA 581
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+K + W+AII AYG + A++ F +MV G PN TFT+VL CS G VDE
Sbjct: 582 VKGS--LTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEA 639
Query: 181 LSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNL 218
F ML+ +++ P +HY+ +I+LL R GR+++A L
Sbjct: 640 YRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 125/249 (50%), Gaps = 5/249 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVED-VQPDNA 59
MY KC L+ ++F + ++ W A+++G HN EA+ LF+ M+ E+ + P++
Sbjct: 258 MYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSV 317
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
++LP + LK +H ++++S ++ + V S L+D+Y KCG + +F
Sbjct: 318 ILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVF-- 375
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
K ++ I W+A+++ Y +G + A+ M Q G +P+ VT +VL C+ + +
Sbjct: 376 YGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIK 435
Query: 179 EGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
+G + + LK+ +P V T ++ + + G + L + + N W A++
Sbjct: 436 QGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQR-NVKAWTAMIDCY 494
Query: 239 VSHENVELG 247
V + ++ G
Sbjct: 495 VENCDLRAG 503
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 117/237 (49%), Gaps = 9/237 (3%)
Query: 5 CNCGNLS--YKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFN 62
C CG+++ ++F + ++ W A++SG+ N +A++ M E +PD T
Sbjct: 363 CKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIA 422
Query: 63 SLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK 122
++LP A L +KQ IHCY +++ FL + + + L+ +YSKCG Y +F+ L+
Sbjct: 423 TVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFD--RLE 480
Query: 123 DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLS 182
+++ W+A+I Y ++ + +F M+ S +P+ VT VL CS + + G
Sbjct: 481 QRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKE 540
Query: 183 LFQFMLKHHI--IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGA 237
L +LK IP V II + G+ G L A + +K W A++ A
Sbjct: 541 LHGHILKKEFESIPFVSAR--IIKMYGKCGDLRSANFSFDAVAVK-GSLTWTAIIEA 594
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 113/243 (46%), Gaps = 11/243 (4%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAR--EAIQLFKQMLVEDVQPDN 58
MY C + K+F +++ WNA+L G + + R + + F +M V +
Sbjct: 155 MYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNV 214
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
+ +++ ++A + L+Q + H I++G + + + LVD+Y KCG +G A +F+
Sbjct: 215 YSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDE 274
Query: 119 IPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMV-QSGVKPNQVTFTSVLHACSHVGLV 177
I ++DI++W A+IA + A+ LF M+ + + PN V T++L V +
Sbjct: 275 IV--ERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKAL 332
Query: 178 DEGLSLFQFMLKHHII---PLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGAL 234
G + +LK P V ++ +IDL + G + + + N W AL
Sbjct: 333 KLGKEVHAHVLKSKNYVEQPFV--HSGLIDLYCKCGDMASGRRVFYGSKQR-NAISWTAL 389
Query: 235 LGA 237
+
Sbjct: 390 MSG 392
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 119/252 (47%), Gaps = 13/252 (5%)
Query: 56 PDNAT-FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHH 114
P NAT F++LL A L +H ++ +G + + LV +Y+ CGS+ A
Sbjct: 108 PVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQK 167
Query: 115 IFNIIPLKDKDIIIWSAIIAAY---GKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHAC 171
+F+ ++ W+A++ GK + ++ +S F EM + GV N + ++V +
Sbjct: 168 VFD--ESTSSNVYSWNALLRGTVISGKKRYQDV-LSTFTEMRELGVDLNVYSLSNVFKSF 224
Query: 172 SHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVW 231
+ + +GL +K+ + V T ++D+ + G++ A + + ++ + VW
Sbjct: 225 AGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEI-VERDIVVW 283
Query: 232 GALLGACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNEV 291
GA++ A ++H + + T E + N ++L + +G DV+ ++ + EV
Sbjct: 284 GAMI-AGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLG---DVKALK-LGKEV 338
Query: 292 GLRKLPAQSLVE 303
L +++ VE
Sbjct: 339 HAHVLKSKNYVE 350
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 124/254 (48%), Gaps = 5/254 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKR-TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
MY KC + F + S+ R WNA+L+G + +A+ F+ M VE +P
Sbjct: 439 MYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVE-AKPSKY 497
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
T +LL A + L IH +LIR G+ + + +VD+YSKC YA +F
Sbjct: 498 TLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFK-- 555
Query: 120 PLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
+D+I+W++II ++G + LF + GVKP+ VTF +L AC G V+
Sbjct: 556 EAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVEL 615
Query: 180 GLSLFQFM-LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
G F M K+HI P V+HY C+I+L + G L + MP P + + AC
Sbjct: 616 GFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDAC 675
Query: 239 VSHENVELGEVAAR 252
+ +LG AA+
Sbjct: 676 QRYRWSKLGAWAAK 689
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 128/260 (49%), Gaps = 7/260 (2%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
Y KC C + + ++F + ++ WNAV++ N ++ E ++F++M + V+ +F
Sbjct: 106 YGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSF 165
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+L + ++ DL+ +HC +++ G+ +++ + +VD+Y KC + A +F+ I
Sbjct: 166 AGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIV- 224
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
+ + W+ I+ Y + G + AV +F +M++ V+P T +SV+ ACS ++ G
Sbjct: 225 -NPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGK 283
Query: 182 SLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSH 241
+ +K ++ T + D+ + RL+ A + K + A+ G +S
Sbjct: 284 VIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSG 343
Query: 242 ENVELGEVAARWTFELEPEN 261
E AR F+L PE
Sbjct: 344 LTRE-----ARELFDLMPER 358
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 128/280 (45%), Gaps = 36/280 (12%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
YA + ++F ++ WNA+L G++H EA+ M E DN T
Sbjct: 339 YAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTL 398
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL 121
+L + ++D++ H ++ R G+ + VA+ L+D+Y KCG+L A+ F +
Sbjct: 399 VWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMS- 457
Query: 122 KDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
+ +D + W+A++ + G E A+S F M Q KP++ T ++L C+++ ++ G
Sbjct: 458 ELRDEVSWNALLTGVARVGRSEQALSFFEGM-QVEAKPSKYTLATLLAGCANIPALNLGK 516
Query: 182 SLFQFMLKHHII-------PLVDHYT---------------CIIDLL------------G 207
++ F+++ +VD Y+ DL+ G
Sbjct: 517 AIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNG 576
Query: 208 RAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELG 247
R+ + + + L+ +KP+H + +L AC+ +VELG
Sbjct: 577 RSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELG 616
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 106/264 (40%), Gaps = 29/264 (10%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
+Y KC + + ++F + WN ++ ++ EA+ +F +ML +V+P N T
Sbjct: 206 VYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHT 265
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+S++ A + L+ IH ++ + V++ + D+Y KC L A +F+
Sbjct: 266 VSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTR 325
Query: 121 LKD-----------------------------KDIIIWSAIIAAYGKHGHGEMAVSLFNE 151
KD ++I+ W+A++ Y + A+
Sbjct: 326 SKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTL 385
Query: 152 MVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGR 211
M Q + VT +L+ CS + V G F+ +H V ++D+ G+ G
Sbjct: 386 MRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGT 445
Query: 212 LDDAYNLIRTMPIKPNHAVWGALL 235
L A R M + W ALL
Sbjct: 446 LQSANIWFRQMSELRDEVSWNALL 469
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 76 QAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAA 135
QA + +L+ L + + + ++ Y KCG + A +F +P ++D W+A+I A
Sbjct: 79 QARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMP--ERDGGSWNAVITA 136
Query: 136 YGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQF---MLKHHI 192
++G + +F M + GV+ + +F VL +C GL+ + L Q ++K+
Sbjct: 137 CAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSC---GLILDLRLLRQLHCAVVKYGY 193
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
VD T I+D+ G+ + DA + + + P+ W ++
Sbjct: 194 SGNVDLETSIVDVYGKCRVMSDARRVFDEI-VNPSDVSWNVIV 235
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 118/223 (52%), Gaps = 7/223 (3%)
Query: 38 LAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVAS 97
L ++AI+L L + PD F L + A L L+ + +H + ++S F ++ +
Sbjct: 220 LYKDAIEL----LDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNN 275
Query: 98 ILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGV 157
+++ ++ +C S+ A +F+ + DKD+ W ++ AY +G G+ A+ LF EM + G+
Sbjct: 276 MVISMFGECSSITDAKRVFDH--MVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGL 333
Query: 158 KPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAY 216
KPN+ TF +V AC+ VG ++E F M H I P +HY ++ +LG+ G L +A
Sbjct: 334 KPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAE 393
Query: 217 NLIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEP 259
IR +P +P W A+ H +++L + +++P
Sbjct: 394 QYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDP 436
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 116/235 (49%), Gaps = 3/235 (1%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MYAKC + K+F S + T W ++++ EAI LF+ M + +N T
Sbjct: 328 MYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLT 387
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A + L +H +I++ + + S LV +Y KCG A ++ +P
Sbjct: 388 VVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP 447
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+D++ W+A+I+ GH A+ EM+Q GV+PN T++S L AC++ + G
Sbjct: 448 --SRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIG 505
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL 235
S+ K+H + V + +I + + G + +A+ + +MP K N W A++
Sbjct: 506 RSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEK-NLVSWKAMI 559
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 123/248 (49%), Gaps = 5/248 (2%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
YA+C + + F +K W AV+S +AI +F ML P+ T
Sbjct: 227 FYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFT 286
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
S+L A + L+ +H +++ + V + L+D+Y+KCG + +F+
Sbjct: 287 VCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFD--G 344
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+ +++ + W++IIAA+ + G GE A+SLF M + + N +T S+L AC VG + G
Sbjct: 345 MSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLG 404
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
L ++K+ I V + ++ L + G DA+N+++ +P + + W A++ C S
Sbjct: 405 KELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSR-DVVSWTAMISGCSS 463
Query: 241 --HENVEL 246
HE+ L
Sbjct: 464 LGHESEAL 471
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 120/246 (48%), Gaps = 10/246 (4%)
Query: 8 GNLSY--KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT-FNSL 64
G+L Y K+F +K T W A++ G++ L EA LF+ + ++ N F L
Sbjct: 131 GDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCL 190
Query: 65 LPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDK 124
L + A+ + +H +++ G + L V S LV Y++CG L A F++ +++K
Sbjct: 191 LNLCSRRAEFELGRQVHGNMVKVG-VGNLIVESSLVYFYAQCGELTSALRAFDM--MEEK 247
Query: 125 DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLF 184
D+I W+A+I+A + GHG A+ +F M+ PN+ T S+L ACS + G +
Sbjct: 248 DVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVH 307
Query: 185 QFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENV 244
++K I V T ++D+ + G + D + M + N W +++ A H
Sbjct: 308 SLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNR-NTVTWTSIIAA---HARE 363
Query: 245 ELGEVA 250
GE A
Sbjct: 364 GFGEEA 369
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 14/231 (6%)
Query: 18 TSKKRTAPWNAVLSGFIHNSLAREAIQL-FKQMLVEDV-QPDNATFNSLLPAYAILADLK 75
+ KR + L GF S R + F E+V Q D+++F+S YA+LA+
Sbjct: 33 SRTKREEQRHVRLPGFRLVSGKRASFDSGFSGFKGENVNQDDSSSFDSERVDYALLAEWL 92
Query: 76 QAMN-------IHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIII 128
Q+ N IH ++ + + L+ + G L YA +F+ +P +K+ +
Sbjct: 93 QSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMP--EKNTVT 150
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVK-PNQVTFTSVLHACSHVGLVDEGLSLFQFM 187
W+A+I Y K+G + A +LF + V+ G++ N+ F +L+ CS + G + M
Sbjct: 151 WTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNM 210
Query: 188 LKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGAC 238
+K + L+ + ++ + G L A M K + W A++ AC
Sbjct: 211 VKVGVGNLIVE-SSLVYFYAQCGELTSALRAFDMMEEK-DVISWTAVISAC 259
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 111/195 (56%), Gaps = 8/195 (4%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQML-VEDVQPDNATFNSLLPAYAIL 71
++F K+ WN++++G+ HN A AI+ F+ M+ D +PD T S+L A +
Sbjct: 352 QLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHM 411
Query: 72 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSA 131
ADL+ I Y+ ++ L+ +Y++ G+L A +F+ +K++D++ ++
Sbjct: 412 ADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFD--EMKERDVVSYNT 469
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH 191
+ A+ +G G ++L ++M G++P++VT+TSVL AC+ GL+ EG +F+ +
Sbjct: 470 LFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN-- 527
Query: 192 IIPLVDHYTCIIDLL 206
PL DHY C +DLL
Sbjct: 528 --PLADHYAC-MDLL 539
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 117/254 (46%), Gaps = 35/254 (13%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
+AK + K F + +K WNA+LSG+ N +A++LF ML V+P+ T+
Sbjct: 208 FAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTW 267
Query: 62 NSLLPAYAILAD---------------------LKQA---MNIHCYLIRS--------GF 89
++ A + AD +K A M+ C I+S G
Sbjct: 268 VIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGT 327
Query: 90 LYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLF 149
L + ++ Y++ G + A +F+ +P ++++ W+++IA Y +G +A+ F
Sbjct: 328 QRNLVTWNAMISGYTRIGDMSSARQLFDTMP--KRNVVSWNSLIAGYAHNGQAALAIEFF 385
Query: 150 NEMVQSG-VKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGR 208
+M+ G KP++VT SVL AC H+ ++ G + ++ K+ I Y +I + R
Sbjct: 386 EDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYAR 445
Query: 209 AGRLDDAYNLIRTM 222
G L +A + M
Sbjct: 446 GGNLWEAKRVFDEM 459
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 113/261 (43%), Gaps = 47/261 (18%)
Query: 1 MYAKCNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNAT 60
MY K + K+F + S+++ + WN ++SG+ EA +LF M DV +
Sbjct: 145 MYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDV----VS 200
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+ ++ +A + DL+ A F+ +P
Sbjct: 201 WTVMITGFAKVKDLENA-----------------------------------RKYFDRMP 225
Query: 121 LKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEG 180
+K ++ W+A+++ Y ++G E A+ LFN+M++ GV+PN+ T+ V+ ACS
Sbjct: 226 --EKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLT 283
Query: 181 LSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVS 240
SL + + + + T ++D+ + + A + + + N W A++
Sbjct: 284 RSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGY-- 341
Query: 241 HENVELGEV-AARWTFELEPE 260
+G++ +AR F+ P+
Sbjct: 342 ---TRIGDMSSARQLFDTMPK 359
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 121/273 (44%), Gaps = 22/273 (8%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIR 86
N++ F +A + ++L++Q + PD +F ++ + L QA+ + +
Sbjct: 75 NSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQAL-----VEK 129
Query: 87 SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAV 146
GF V ++++D+Y K S+ A +F+ I + W+ +I+ Y K G+ E A
Sbjct: 130 LGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSD--WNVMISGYWKWGNKEEAC 187
Query: 147 SLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLL 206
LF+ M ++ V V++T ++ + V ++ F M + ++ + ++
Sbjct: 188 KLFDMMPENDV----VSWTVMITGFAKVKDLENARKYFDRMPEKSVV----SWNAMLSGY 239
Query: 207 GRAGRLDDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPE-NT 262
+ G +DA L M ++PN W ++ AC + L + E N
Sbjct: 240 AQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNC 299
Query: 263 GNYILLANLYAAVGRWRDVEKVRDMVNEVGLRK 295
L +++A + RD++ R + NE+G ++
Sbjct: 300 FVKTALLDMHA---KCRDIQSARRIFNELGTQR 329
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 3/187 (1%)
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
L++A +H + S L +L+++YS CG A +F + +K++ W II
Sbjct: 270 LQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFE--KMSEKNLETWCIII 327
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH-I 192
+ K+G GE A+ +F+ + G P+ F + +AC +G VDEGL F+ M + + I
Sbjct: 328 RCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGI 387
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEVAAR 252
P ++ Y ++++ G LD+A + MP++PN VW L+ H N+ELG+ A
Sbjct: 388 APSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAE 447
Query: 253 WTFELEP 259
L+P
Sbjct: 448 VVEFLDP 454
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 98/176 (55%), Gaps = 5/176 (2%)
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
L++A +H ++ S + + + ++++YS CGS+ A +FN +P ++++ W +I
Sbjct: 197 LQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMP--ERNLETWCGVI 254
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH-I 192
+ K+G GE A+ F+ Q G KP+ F + AC +G ++EGL F+ M K + I
Sbjct: 255 RCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGI 314
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGE 248
IP ++HY ++ +L G LD+A + +M +PN +W L+ H ++ LG+
Sbjct: 315 IPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILGD 368
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 107/206 (51%), Gaps = 4/206 (1%)
Query: 99 LVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVK 158
++++YS C S A ++FN +P ++ + W +I K+G GE A+ +F ++ G K
Sbjct: 149 VIEMYSGCRSTDDALNVFNEMPKRNSET--WGTMIRCLAKNGEGERAIDMFTRFIEEGNK 206
Query: 159 PNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPL-VDHYTCIIDLLGRAGRLDDAYN 217
P++ F +V AC +G ++EGL F+ M + + + L ++ Y +I++L G LD+A +
Sbjct: 207 PDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALD 266
Query: 218 LIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGR 277
+ M ++P+ +W L+ C +ELG+ A +L+ A L AA
Sbjct: 267 FVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKES-NAGLVAAKAS 325
Query: 278 WRDVEKVRDMVNEVGLRKLPAQSLVE 303
+EK++++ +R P + + E
Sbjct: 326 DSAMEKLKELRYCQMIRDDPKKRMHE 351
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 85/161 (52%), Gaps = 3/161 (1%)
Query: 99 LVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVK 158
++++YS C S+ A +F +P + + ++ + +G+GE A+ LF + G K
Sbjct: 160 IIEMYSGCCSVDDALKVFEEMPEWNSGTLC--VMMRCFVNNGYGEEAIDLFTRFKEEGNK 217
Query: 159 PNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH-IIPLVDHYTCIIDLLGRAGRLDDAYN 217
PN F V C+ G V EG FQ M + + I+P ++HY + +L +G LD+A N
Sbjct: 218 PNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALN 277
Query: 218 LIRTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELE 258
+ MP++P+ VW L+ H +VELG+ A +L+
Sbjct: 278 FVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLD 318
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 115/228 (50%), Gaps = 5/228 (2%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
+M K T +N ++ + + +EA+ +F QM +PD T+ +L+ +A
Sbjct: 384 EMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAG 443
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWS 130
L AM+++ + +G S++++ K G L AH +F + + +++ ++
Sbjct: 444 FLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFN 503
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
+IA + K + E A+ L+ +M +G +P++VT++ V+ H G ++E +F M +
Sbjct: 504 IMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRK 563
Query: 191 HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALL 235
+ +P Y ++DL G+AG +D A+ + M ++PN +LL
Sbjct: 564 NWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLL 611
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 111/226 (49%), Gaps = 5/226 (2%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N+++S + + + EA++L QM + +PD T+ +LL + ++ AM+I +
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL--KDKDIIIWSAIIAAYGKHGHGE 143
+G + + + +Y G IF+ I + DI+ W+ ++A +G++G
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
+F EM ++G P + TF +++ A S G ++ +++++ ML + P + Y ++
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531
Query: 204 DLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALLGACVSHENVEL 246
L R G + + ++ M KPN + +LL A + + + L
Sbjct: 532 AALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGL 577
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 105/237 (44%), Gaps = 18/237 (7%)
Query: 5 CNCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSL 64
C ++Y + + K PWN + S L ++M + + PD T+N+L
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITS-------------LVEKMKSDGIAPDAYTYNTL 285
Query: 65 LPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK-- 122
+ + ++A + + +GF Y + L+D+Y K A + N + L
Sbjct: 286 ITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGF 345
Query: 123 DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLS 182
I+ ++++I+AY + G + A+ L N+M + G KP+ T+T++L G V+ +S
Sbjct: 346 SPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMS 405
Query: 183 LFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDA---YNLIRTMPIKPNHAVWGALLG 236
+F+ M P + + I + G G+ + ++ I + P+ W LL
Sbjct: 406 IFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLA 462
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 92/197 (46%), Gaps = 2/197 (1%)
Query: 41 EAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILV 100
EA + F ++ PD T NS++ Y + +A + Y+ GF + + L+
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Query: 101 DIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVK 158
++S+ G + I I K DII ++ +I AY ++ A +F+EM SG+
Sbjct: 672 YMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIV 731
Query: 159 PNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNL 218
P+ +T+ + + + + + +E + + ++M+KH P + Y I+D + R D+A
Sbjct: 732 PDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLF 791
Query: 219 IRTMPIKPNHAVWGALL 235
+ + HA G L
Sbjct: 792 VEDLRNLDPHAPKGEDL 808
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 107/224 (47%), Gaps = 22/224 (9%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+ +++S F ++ REA+ +FK+M + +P T+N +L + + +
Sbjct: 211 YTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKI------- 263
Query: 86 RSGFLYRLEVASILVDIYS--------KCGSL-GYAHHIFNIIPLK--DKDIIIWSAIIA 134
+ + +++ I D Y+ K GSL A +F + D + ++A++
Sbjct: 264 -TSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 135 AYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIP 194
YGK + A+ + NEMV +G P+ VT+ S++ A + G++DE + L M + P
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 195 LVDHYTCIIDLLGRAGRLDDAYNL---IRTMPIKPNHAVWGALL 235
V YT ++ RAG+++ A ++ +R KPN + A +
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFI 426
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 130/281 (46%), Gaps = 7/281 (2%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIR 86
+++L+G+ H+ EA+ L QM V QP+ TFN+L+ + +AM + ++
Sbjct: 155 SSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVA 214
Query: 87 SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGEM 144
G L ++V+ K G A ++ N + + ++I++ II K+ H +
Sbjct: 215 KGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDD 274
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIID 204
A++LF EM G++PN VT++S++ + G + L M++ I P V ++ +ID
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334
Query: 205 LLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPEN 261
+ G+L +A L M I P+ + +L+ H+ L E + F +
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD--RLDEAKQMFEFMVSKHC 392
Query: 262 TGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLV 302
+ + L +++ VE+ ++ E+ R L ++
Sbjct: 393 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 125/272 (45%), Gaps = 9/272 (3%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
++A++ F+ EA +L+ +M+ + P T++SL+ + + L +A + +++
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 388
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHGHGE 143
+ + L+ + K + +F + + + + ++ +I + G +
Sbjct: 389 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 448
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
MA +F EMV GV PN +T+ ++L G +++ + +F+++ + + P + Y +I
Sbjct: 449 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 508
Query: 204 DLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALL-GACVSHENVELGEVAARWTFELEP 259
+ + +AG+++D ++L + +KP+ + ++ G C E + +
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 568
Query: 260 ENTGNYILLANLYAAVGRWRDVEKVRDMVNEV 291
N+G Y L A R D E +++ E+
Sbjct: 569 PNSGCY---NTLIRARLRDGDREASAELIKEM 597
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 115/262 (43%), Gaps = 11/262 (4%)
Query: 9 NLSYKMFMKTSKKRTAP----WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSL 64
+L++ + K + + P +N ++ G +A+ LFK+M + ++P+ T++SL
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 65 LPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK-- 122
+ A + +I + S L+D + K G L A +++ + +
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 123 DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLS 182
D I+ +S++I + H + A +F MV P+ VT+ +++ V+EG+
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 183 LFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGACV 239
+F+ M + ++ Y +I L +AG D A + + M + PN + LL
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477
Query: 240 SHENVELGEVAARW--TFELEP 259
+ +E V + ++EP
Sbjct: 478 KNGKLEKAMVVFEYLQRSKMEP 499
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 41/249 (16%)
Query: 13 KMFMKTSKKRTAPWNAVLSG-FIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAIL 71
+MF+ + T +N ++ G F+HN A EA+ L +M+ + QPD T+ ++
Sbjct: 176 QMFVTGYQPNTVTFNTLIHGLFLHNK-ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR 234
Query: 72 ADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--------- 122
D A N+ + + + + + ++D K + A ++F + K
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 123 ----------------------------DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ 154
+ D+ +SA+I A+ K G A L++EMV+
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 155 SGVKPNQVTFTSVLHA-CSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLD 213
+ P+ VT++S+++ C H L DE +F+FM+ H P V Y +I + R++
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRL-DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Query: 214 DAYNLIRTM 222
+ + R M
Sbjct: 414 EGMEVFREM 422
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 75/150 (50%), Gaps = 2/150 (1%)
Query: 23 TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHC 82
T +N ++ G A ++FK+M+ + V P+ T+N+LL L++AM +
Sbjct: 431 TVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 490
Query: 83 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHG 140
YL RS + +I+++ K G + +F + LK D++ ++ +I+ + + G
Sbjct: 491 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 550
Query: 141 HGEMAVSLFNEMVQSGVKPNQVTFTSVLHA 170
E A +LF EM + G PN + +++ A
Sbjct: 551 SKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 113/256 (44%), Gaps = 9/256 (3%)
Query: 41 EAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILV 100
+A+ LF +M+ P F+ LL A A + +++ + G + SIL+
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILI 123
Query: 101 DIYSKCGSLGYAHHIF-NIIPLK-DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVK 158
+ + + L A + ++ L + +I+ S+++ Y AV+L ++M +G +
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 183
Query: 159 PNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNL 218
PN VTF +++H E ++L M+ P + Y +++ L + G D A+NL
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 219 IRTM---PIKPNHAVWGALL-GAC-VSHENVELGEVAARWTFELEPENTGNYILLANLYA 273
+ M ++P ++ ++ G C H + L T + P N Y L +
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP-NVVTYSSLISCLC 302
Query: 274 AVGRWRDVEK-VRDMV 288
GRW D + + DM+
Sbjct: 303 NYGRWSDASRLLSDMI 318
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 106/224 (47%), Gaps = 5/224 (2%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N ++SG EA +M+ ++PDN T++ L+ + +++A+
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHGHGE 143
R+G L + S+++D K F+ + K+ + ++++ +I AY + G
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
MA+ L +M G+ PN T+TS++ S + V+E LF+ M + P V HYT +I
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722
Query: 204 DLLGRAGRLDDAYNLIRTMPIK---PNHAVWGALLGACVSHENV 244
D G+ G++ L+R M K PN + ++G NV
Sbjct: 723 DGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 125 DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLF 184
D+ +++ I A+ K G E AV LF++M ++GV PN VTF +V+ G DE
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 185 QFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK---PNHAVWGALLGA 237
+ M++ + P + Y+ ++ L RA R+ DAY +++ M K PN V+ L+ +
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 8/213 (3%)
Query: 13 KMFMKTSKKRTAP----WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
K+F K + AP +N V+ G EA ++M+ ++P T++ L+
Sbjct: 281 KLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGL 340
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDII- 127
+ A + + + GF + V + L+D + + GSL A I +++ K +
Sbjct: 341 TRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTS 400
Query: 128 -IWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLH-ACSHVGLVDEGLSLFQ 185
++ +I Y K+G + A L EM+ G NQ +FTSV+ CSH+ + D L
Sbjct: 401 STYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL-MFDSALRFVG 459
Query: 186 FMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNL 218
ML ++ P T +I L + G+ A L
Sbjct: 460 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 2/171 (1%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
++ ++ G E + F +M+ ++VQP+ +N L+ AY L A+ + +
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 672
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGE 143
G + L+ S + A +F + ++ + ++ ++A+I YGK G
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 732
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIP 194
L EM V PN++T+T ++ + G V E L M + I+P
Sbjct: 733 KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 783
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 108/269 (40%), Gaps = 20/269 (7%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIR 86
++SG + +A++L+ Q L + D T N+LL L +A I ++
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 87 SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDK----DIIIWSAIIAAYGKHGHG 142
G + ++ S I CG + + + D +S +I
Sbjct: 534 RGCV--MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 591
Query: 143 EMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCI 202
E A+ +++ ++G+ P+ T++ ++ C +EG F M+ ++ P Y +
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651
Query: 203 IDLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELGEVAARWTFE--- 256
I R+GRL A L M I PN A + +L+ VE A+ FE
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE----EAKLLFEEMR 707
Query: 257 ---LEPENTGNYILLANLYAAVGRWRDVE 282
LEP N +Y L + Y +G+ VE
Sbjct: 708 MEGLEP-NVFHYTALIDGYGKLGQMVKVE 735
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 77/164 (46%), Gaps = 10/164 (6%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
+M K + T +N ++ + + A++L + M + + P++AT+ SL+ +I++
Sbjct: 635 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 694
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH------HIFNIIPLKDKDI 126
+++A + + G + + L+D Y K G + H N+ P K
Sbjct: 695 RVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK---- 750
Query: 127 IIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHA 170
I ++ +I Y + G+ A L NEM + G+ P+ +T+ ++
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 794
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/201 (19%), Positives = 89/201 (44%), Gaps = 5/201 (2%)
Query: 42 AIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVD 101
A++ +ML+ ++ P +L+ +A+ + + GF+ ++ L+
Sbjct: 454 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 513
Query: 102 IYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKP 159
+ G L A I I + D + ++ +I+ + A +EMV+ G+KP
Sbjct: 514 GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 573
Query: 160 NQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLI 219
+ T++ ++ ++ V+E + + ++ ++P V Y+ +ID +A R ++
Sbjct: 574 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 633
Query: 220 RTM---PIKPNHAVWGALLGA 237
M ++PN V+ L+ A
Sbjct: 634 DEMMSKNVQPNTVVYNHLIRA 654
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 106/224 (47%), Gaps = 5/224 (2%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N ++SG EA +M+ ++PDN T++ L+ + +++A+
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHGHGE 143
R+G L + S+++D K F+ + K+ + ++++ +I AY + G
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
MA+ L +M G+ PN T+TS++ S + V+E LF+ M + P V HYT +I
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722
Query: 204 DLLGRAGRLDDAYNLIRTMPIK---PNHAVWGALLGACVSHENV 244
D G+ G++ L+R M K PN + ++G NV
Sbjct: 723 DGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 125 DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLF 184
D+ +++ I A+ K G E AV LF++M ++GV PN VTF +V+ G DE
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 185 QFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK---PNHAVWGALLGA 237
+ M++ + P + Y+ ++ L RA R+ DAY +++ M K PN V+ L+ +
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 8/213 (3%)
Query: 13 KMFMKTSKKRTAP----WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
K+F K + AP +N V+ G EA ++M+ ++P T++ L+
Sbjct: 281 KLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGL 340
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDII- 127
+ A + + + GF + V + L+D + + GSL A I +++ K +
Sbjct: 341 TRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTS 400
Query: 128 -IWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLH-ACSHVGLVDEGLSLFQ 185
++ +I Y K+G + A L EM+ G NQ +FTSV+ CSH+ + D L
Sbjct: 401 STYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL-MFDSALRFVG 459
Query: 186 FMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNL 218
ML ++ P T +I L + G+ A L
Sbjct: 460 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 2/171 (1%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
++ ++ G E + F +M+ ++VQP+ +N L+ AY L A+ + +
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 672
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGE 143
G + L+ S + A +F + ++ + ++ ++A+I YGK G
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 732
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIP 194
L EM V PN++T+T ++ + G V E L M + I+P
Sbjct: 733 KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP 783
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 108/269 (40%), Gaps = 20/269 (7%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIR 86
++SG + +A++L+ Q L + D T N+LL L +A I ++
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 87 SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDK----DIIIWSAIIAAYGKHGHG 142
G + ++ S I CG + + + D +S +I
Sbjct: 534 RGCV--MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 591
Query: 143 EMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCI 202
E A+ +++ ++G+ P+ T++ ++ C +EG F M+ ++ P Y +
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651
Query: 203 IDLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELGEVAARWTFE--- 256
I R+GRL A L M I PN A + +L+ VE A+ FE
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE----EAKLLFEEMR 707
Query: 257 ---LEPENTGNYILLANLYAAVGRWRDVE 282
LEP N +Y L + Y +G+ VE
Sbjct: 708 MEGLEP-NVFHYTALIDGYGKLGQMVKVE 735
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 77/164 (46%), Gaps = 10/164 (6%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
+M K + T +N ++ + + A++L + M + + P++AT+ SL+ +I++
Sbjct: 635 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 694
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAH------HIFNIIPLKDKDI 126
+++A + + G + + L+D Y K G + H N+ P K
Sbjct: 695 RVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK---- 750
Query: 127 IIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHA 170
I ++ +I Y + G+ A L NEM + G+ P+ +T+ ++
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 794
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/201 (19%), Positives = 89/201 (44%), Gaps = 5/201 (2%)
Query: 42 AIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVD 101
A++ +ML+ ++ P +L+ +A+ + + GF+ ++ L+
Sbjct: 454 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 513
Query: 102 IYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKP 159
+ G L A I I + D + ++ +I+ + A +EMV+ G+KP
Sbjct: 514 GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 573
Query: 160 NQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLI 219
+ T++ ++ ++ V+E + + ++ ++P V Y+ +ID +A R ++
Sbjct: 574 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 633
Query: 220 RTM---PIKPNHAVWGALLGA 237
M ++PN V+ L+ A
Sbjct: 634 DEMMSKNVQPNTVVYNHLIRA 654
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 121/256 (47%), Gaps = 11/256 (4%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIR 86
N +L G N +A+ L ++M + PD ++N+++ + +L++A+ + +
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKG 205
Query: 87 SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGEM 144
SG + L IL+D + K G + A + + D+++++++I + G +
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDR 265
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIID 204
+LF+E+++ G P +T+ +++ +G + E +F+FM++ + P V YT +ID
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325
Query: 205 LLGRAGRLDDAYNLIRTMPIK---PNHAVWGALLGACVSH----ENVELGEVAARWTFEL 257
L G+ +A L+ M K PN + ++ + VE+ E+ +
Sbjct: 326 GLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR--RT 383
Query: 258 EPENTGNYILLANLYA 273
P+N ILL L A
Sbjct: 384 RPDNITYNILLGGLCA 399
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 100/227 (44%), Gaps = 7/227 (3%)
Query: 25 PWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYL 84
+N V+ GF +A++L +M T+ L+ A+ + +AM +
Sbjct: 179 SYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM 238
Query: 85 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKD---IIIWSAIIAAYGKHGH 141
G L V + L+ + CG L +F+ + L+ D I ++ +I + K G
Sbjct: 239 KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV-LERGDSPCAITYNTLIRGFCKLGQ 297
Query: 142 GEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTC 201
+ A +F M++ GV+PN T+T ++ VG E L L M++ P Y
Sbjct: 298 LKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNI 357
Query: 202 IIDLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALLGACVSHENVE 245
II+ L + G + DA ++ M +P++ + LLG + +++
Sbjct: 358 IINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLD 404
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 94/218 (43%), Gaps = 4/218 (1%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
M K + +N +++ + L +A+++ + M +PDN T+N LL D
Sbjct: 343 MIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGD 402
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKC--GSLGYAHHIFNII--PLKDKDIIIW 129
L +A + +++ +V S I+ C L A I++++ L D +
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT 462
Query: 130 SAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLK 189
+ ++ + K G A+ L+ ++ S + N T+T+++ G+++ L M
Sbjct: 463 NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522
Query: 190 HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPN 227
+ P V Y C++ L + G LD A+ L M N
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNN 560
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 13/216 (6%)
Query: 21 KRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNI 80
+ + + A++ GF + A L +M V ++QP +N LL + L QA +
Sbjct: 492 RNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRL 551
Query: 81 HCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF------NIIPLKDKDIIIWSAIIA 134
+ R + +I++D K G + A + + P D+ +S +I
Sbjct: 552 FEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSP----DLFTYSKLIN 607
Query: 135 AYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIP 194
+ K G+ + A+S F++MV SG +P+ SVL C G D+ L + ++ I+
Sbjct: 608 RFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIV- 666
Query: 195 LVDHYTC-IID-LLGRAGRLDDAYNLIRTMPIKPNH 228
L TC ++D + + +D A L+R K
Sbjct: 667 LDKELTCTVMDYMCNSSANMDLAKRLLRVTDDKEER 702
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 83/199 (41%), Gaps = 2/199 (1%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
W ++ F EA+ K+M ++ D + SL+ + +L + + ++
Sbjct: 215 WGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVL 274
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHGHGE 143
G + L+ + K G L A IF + + ++ ++ +I G +
Sbjct: 275 ERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTK 334
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
A+ L N M++ +PN VT+ +++ GLV + + + + M K P Y ++
Sbjct: 335 EALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILL 394
Query: 204 DLLGRAGRLDDAYNLIRTM 222
L G LD+A L+ M
Sbjct: 395 GGLCAKGDLDEASKLLYLM 413
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 107/235 (45%), Gaps = 8/235 (3%)
Query: 25 PWNAVLSGFIHNSLAREAIQLFKQMLVEDVQP-DNATFNSLLPAYAILADLKQAMNIHCY 83
+NA++ G + +A+ ++ +LVE + D T N LL + D+ +AM +
Sbjct: 426 SYNALIHGLCKENRLHQALDIY-DLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQ 484
Query: 84 LIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHGH 141
+ S + + + ++D + K G L A + + + + + ++ ++++ K G
Sbjct: 485 ISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGS 544
Query: 142 GEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTC 201
+ A LF EM + P+ V+F ++ G + SL M + + P + Y+
Sbjct: 545 LDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSK 604
Query: 202 IIDLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGACVSH-ENVELGEVAAR 252
+I+ + G LD+A + M +P+ + ++L C+S E +L E+ +
Sbjct: 605 LINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKK 659
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 130/282 (46%), Gaps = 9/282 (3%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIR 86
N++L+GF H + +A+ L QM+ +PD TF +L+ + +A+ + +++
Sbjct: 152 NSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQ 211
Query: 87 SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGEM 144
G L +V+ K G A ++ N + + +++I+S +I + K+ H +
Sbjct: 212 RGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 271
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIID 204
A++LF EM GV+PN +T++S++ + G + L M++ I P + ++ +ID
Sbjct: 272 ALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALID 331
Query: 205 LLGRAGRLDDAYNLIRTM---PIKPNHAVWGALL-GACVSHENVELGEVAARWTFELEPE 260
+ G+L A L M I PN + +L+ G C+ LGE + +
Sbjct: 332 AFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLD---RLGEAKQMLELMIRKD 388
Query: 261 NTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLV 302
N + L + + V+K ++ E+ R L ++
Sbjct: 389 CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVT 430
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 110/236 (46%), Gaps = 6/236 (2%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
NL +M K + +++++S + +A +L M+ + P+ TF++L+ A+
Sbjct: 274 NLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAF 333
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDI 126
L +A ++ +I+ + S L++ + LG A + ++ KD ++
Sbjct: 334 VKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNV 393
Query: 127 IIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQF 186
+ ++ +I + K + + LF EM Q G+ N VT+T+++H D +F+
Sbjct: 394 VTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 453
Query: 187 MLKHHIIPLVDHYTCIIDLLGRAGRLDDA---YNLIRTMPIKPNHAVWGALL-GAC 238
M+ + P + Y ++D L + G+L A + ++ ++P+ + ++ G C
Sbjct: 454 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 509
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/188 (19%), Positives = 94/188 (50%), Gaps = 2/188 (1%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
++A++ F+ +A +L+++M+ + P+ T++SL+ + +L L +A + +I
Sbjct: 326 FSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMI 385
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHGHGE 143
R L + + L++ + K + +F + + + + ++ +I + + +
Sbjct: 386 RKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 445
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
A +F +MV GV PN +T+ +L G + + + +F+++ + + P + Y +I
Sbjct: 446 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 505
Query: 204 DLLGRAGR 211
+ + +AG+
Sbjct: 506 EGMCKAGK 513
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 119/268 (44%), Gaps = 19/268 (7%)
Query: 27 NAVLSGFIHNSLAR-----EAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIH 81
N V+ + +SL + +A+ LF +M + V+P+ T++SL+ A +
Sbjct: 252 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLL 311
Query: 82 CYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKH 139
+I L S L+D + K G L A ++ + + D +I +S++I +
Sbjct: 312 SDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCML 371
Query: 140 GHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHY 199
A + M++ PN VT+ ++++ VD+G+ LF+ M + ++ Y
Sbjct: 372 DRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTY 431
Query: 200 TCIIDLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALL-GACVSHENVELGEVAARWTF 255
T +I +A D+A + + M + PN + LL G C +N +L + + +
Sbjct: 432 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC---KNGKLAKAMVVFEY 488
Query: 256 ----ELEPENTGNYILLANLYAAVGRWR 279
+EP+ I++ + A G+W+
Sbjct: 489 LQRSTMEPDIYTYNIMIEGMCKA-GKWK 515
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 112/219 (51%), Gaps = 6/219 (2%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N +L F+ +EA +L+K+M+ + P+ T+N+L+ Y + L +A N+ ++
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHGHGE 143
R+ + + L+ Y + +F I + + + +S ++ + + G +
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 420
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
+A LF EMV GV P+ +T+ +L G +++ L +F+ + K + + YT II
Sbjct: 421 LAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTII 480
Query: 204 DLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALL-GAC 238
+ + + G+++DA+NL ++P +KPN + ++ G C
Sbjct: 481 EGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 519
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 118/278 (42%), Gaps = 43/278 (15%)
Query: 23 TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHC 82
T +N ++ G EA+ L +M+ QPD T+NS++ D A+++
Sbjct: 158 TTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL-- 215
Query: 83 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHG 142
L ++E ++ D+++ +S II + + G
Sbjct: 216 -------LRKMEERNVKADVFT------------------------YSTIIDSLCRDGCI 244
Query: 143 EMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCI 202
+ A+SLF EM G+K + VT+ S++ G ++G L + M+ I+P V + +
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 203 IDLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALL-GACVSHENVELGEVAARWTFELE 258
+D+ + G+L +A L + M I PN + L+ G C+ + L E +
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN---RLSEANNMLDLMVR 361
Query: 259 PENTGNYILLANL---YAAVGRWRDVEKVRDMVNEVGL 293
+ + + + +L Y V R D KV +++ GL
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 399
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 98/221 (44%), Gaps = 13/221 (5%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N ++ G+ + EA + M+ PD TF SL+ Y ++ + M + +
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFN------IIPLKDKDIIIWSAIIAAYGKH 139
+ G + SILV + + G + A +F ++P D++ + ++ +
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP----DVMTYGILLDGLCDN 451
Query: 140 GHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHY 199
G E A+ +F ++ +S + V +T+++ G V++ +LF + + P V Y
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511
Query: 200 TCIIDLLGRAGRLDDAYNLIRTMPIK---PNHAVWGALLGA 237
T +I L + G L +A L+R M PN + L+ A
Sbjct: 512 TVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 114/246 (46%), Gaps = 12/246 (4%)
Query: 5 CNCGNLSYKM-FMKTSKKRTAPWNAVLSGFIHNSLARE-----AIQLFKQMLVEDVQPDN 58
C G+ S + ++ ++R + I +SL R+ AI LFK+M + ++
Sbjct: 204 CRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSV 263
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
T+NSL+ + ++ + + ++L+D++ K G L A+ ++
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 323
Query: 119 IPLK--DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGL 176
+ + +II ++ ++ Y A ++ + MV++ P+ VTFTS++ V
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 177 VDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM---PIKPNHAVWGA 233
VD+G+ +F+ + K ++ Y+ ++ ++G++ A L + M + P+ +G
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 234 LL-GAC 238
LL G C
Sbjct: 444 LLDGLC 449
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 124/270 (45%), Gaps = 11/270 (4%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIR 86
+++L+G+ H+ +A+ L QM+ +PD TF +L+ + +A+ + +++
Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 87 SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGEM 144
G L +V+ K G + A ++ N + +++I++ II + K+ H E+
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEV 276
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIID 204
AV LF EM G++PN VT+ S+++ + G + L ML+ I P V + +ID
Sbjct: 277 AVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALID 336
Query: 205 LLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPE- 260
+ G+L +A L M I P+ + L+ H L E + F + +
Sbjct: 337 AFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHN--RLDEAKQMFKFMVSKDC 394
Query: 261 --NTGNYILLANLYAAVGRWRD-VEKVRDM 287
N Y L N + R D VE R+M
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREM 424
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 132/279 (47%), Gaps = 6/279 (2%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
M K +NA++ F EA +L ++M+ + PD T+N L+ + +
Sbjct: 319 MLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNR 378
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWSA 131
L +A + +++ L ++ + L++ + KC + +F + + + + ++
Sbjct: 379 LDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT 438
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH 191
II + + G + A +F +MV + V + +T++ +LH G +D L +F+++ K
Sbjct: 439 IIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE 498
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL-GACVSHENVELGEVA 250
+ + Y +I+ + +AG++ +A++L ++ IKP+ + ++ G C E ++
Sbjct: 499 MELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLF 558
Query: 251 ARWTFELEPENTGNY--ILLANLYAAVGRWRDVEKVRDM 287
+ + N+G Y ++ ANL R E +++M
Sbjct: 559 RKMKEDGTLPNSGTYNTLIRANLRDC-DRAASAELIKEM 596
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 115/253 (45%), Gaps = 12/253 (4%)
Query: 41 EAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILV 100
+A+ LF M+ P FN LL A A + + +++ + G + L SI +
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 101 DIYSKCGSLGYAHHIF-NIIPLK-DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVK 158
+ + + L A + ++ L + DI+ S+++ Y AV+L ++MV+ G K
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 159 PNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNL 218
P+ TFT+++H E ++L M++ P + Y +++ L + G +D A NL
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNL 245
Query: 219 IRTMP---IKPNHAVWGALLGACVSHENVELGEVAARWTFELEPE----NTGNYILLANL 271
+ M IK N ++ ++ + + +V EVA E+E + N Y L N
Sbjct: 246 LNKMEAARIKANVVIFNTIIDSLCKYRHV---EVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 272 YAAVGRWRDVEKV 284
GRW D ++
Sbjct: 303 LCNYGRWSDASRL 315
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 90/216 (41%), Gaps = 2/216 (0%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
NL KM K +N ++ A+ LF +M + ++P+ T+NSL+
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDI 126
A + ++ + + L+D + K G L A + + + D D
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 127 IIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQF 186
I ++ +I + H + A +F MV PN T+ ++++ V++G+ LF+
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFRE 423
Query: 187 MLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM 222
M + ++ YT II +AG D A + + M
Sbjct: 424 MSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 116/248 (46%), Gaps = 23/248 (9%)
Query: 56 PDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 115
PD ++N LL AYA +K+AM + + +G S+L++++ + G +
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Query: 116 FNIIPLK----DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHAC 171
F + +K D D ++ +I +G+ G+ + V+LF++MV+ ++P+ T+ ++ AC
Sbjct: 375 F--LEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFAC 432
Query: 172 SHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDD---AYNLIRTMPIKPNH 228
GL ++ + Q+M + I+P YT +I+ G+A ++ A+N + + P+
Sbjct: 433 GKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSI 492
Query: 229 AVWGALL-----GACVSHEN------VELGEVAARWTFELEPENTGNYILLANLYAAVGR 277
+ +LL G V V+ G R TF + E Y AV
Sbjct: 493 ETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIE---AYKQGGKFEEAVKT 549
Query: 278 WRDVEKVR 285
+ D+EK R
Sbjct: 550 YVDMEKSR 557
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 116/268 (43%), Gaps = 45/268 (16%)
Query: 61 FNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLE-VASILVDIYSKCGSLGYAHHIFNII 119
F + +A D ++++ + Y+ R + E + +I++ + + G L +F+ +
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM 167
Query: 120 PLK--DKDIIIWSAIIAAYGKHGHGEMAVS------------------------------ 147
P + + + ++A+I AYG++G E ++
Sbjct: 168 PSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLD 227
Query: 148 ------LFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTC 201
LF EM G++P+ VT+ ++L AC+ GL DE +F+ M I+P + Y+
Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH 287
Query: 202 IIDLLGRAGRLDDAYNLIRTMPIK---PNHAVWGALLGACVSHENVE--LGEVAARWTFE 256
+++ G+ RL+ +L+ M P+ + LL A +++ +G
Sbjct: 288 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG 347
Query: 257 LEPENTGNYILLANLYAAVGRWRDVEKV 284
P N Y +L NL+ GR+ DV ++
Sbjct: 348 CTP-NANTYSVLLNLFGQSGRYDDVRQL 374
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 96/233 (41%), Gaps = 41/233 (17%)
Query: 11 SYKMFMKTSKKRTAP----WNAVLSGFIHNSLAREAI-QLFKQMLVEDVQPDNATFNSLL 65
S ++ + ++ +P +N V++ L E + LF +M E +QPD T+N+LL
Sbjct: 195 SLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLL 254
Query: 66 PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKD 125
A AI +A + + G I+P D
Sbjct: 255 SACAIRGLGDEAEMVFRTMNDGG-----------------------------IVP----D 281
Query: 126 IIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQ 185
+ +S ++ +GK E L EM G P+ ++ +L A + G + E + +F
Sbjct: 282 LTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFH 341
Query: 186 FMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNL---IRTMPIKPNHAVWGALL 235
M P + Y+ +++L G++GR DD L +++ P+ A + L+
Sbjct: 342 QMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILI 394
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 33/200 (16%)
Query: 23 TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHC 82
+ + V+ F +L EA+ F M P TF+SLL ++A +K++ I
Sbjct: 457 SKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILS 516
Query: 83 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHG 142
L+ SG IP +++D ++A I AY + G
Sbjct: 517 RLVDSG------------------------------IP-RNRDT--FNAQIEAYKQGGKF 543
Query: 143 EMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCI 202
E AV + +M +S P++ T +VL S LVDE F+ M I+P + Y +
Sbjct: 544 EEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMM 603
Query: 203 IDLLGRAGRLDDAYNLIRTM 222
+ + G+ R DD L+ M
Sbjct: 604 LAVYGKTERWDDVNELLEEM 623
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 85/195 (43%), Gaps = 8/195 (4%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
++ +L+ F + + QLF +M + PD AT+N L+ + K+ + + ++
Sbjct: 355 YSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMV 414
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIII-----WSAIIAAYGKHG 140
+E I CG G I+ + I+ ++ +I A+G+
Sbjct: 415 EENIEPDMETYE---GIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAA 471
Query: 141 HGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYT 200
E A+ FN M + G P+ TF S+L++ + GLV E ++ ++ I D +
Sbjct: 472 LYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFN 531
Query: 201 CIIDLLGRAGRLDDA 215
I+ + G+ ++A
Sbjct: 532 AQIEAYKQGGKFEEA 546
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 114/234 (48%), Gaps = 9/234 (3%)
Query: 13 KMFMKTSKKRTAP----WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
K+ K++ P ++A++ F+ REA +L K+M+ + PD T+ SL+ +
Sbjct: 303 KLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDI 126
L +A ++ ++ G + +IL++ Y K + +F + L+ D
Sbjct: 363 CKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422
Query: 127 IIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQF 186
+ ++ +I + + G E+A LF EMV V+P+ V++ +L G ++ L +F+
Sbjct: 423 VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482
Query: 187 MLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALLGA 237
+ K + + Y II + A ++DDA++L ++P +KP+ + ++G
Sbjct: 483 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGG 536
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 111/250 (44%), Gaps = 12/250 (4%)
Query: 5 CNCGNLSY------KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
C C LS K+ + T ++ +++G EA++L +M+ +P
Sbjct: 118 CRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
T N+L+ + + A+ + ++ +GF ++ + K G A +
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237
Query: 119 IPLKD--KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGL 176
+ + D + +S II K G + A +LFNEM G K + + +T+++ + G
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 177 VDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM---PIKPNHAVWGA 233
D+G L + M+K I P V ++ +ID + G+L +A L + M I P+ + +
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 234 LL-GACVSHE 242
L+ G C ++
Sbjct: 358 LIDGFCKENQ 367
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 92/236 (38%), Gaps = 37/236 (15%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIR 86
NA+++G N +A+ L +M+ QP+ T+ +L AM + +
Sbjct: 181 NALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE 240
Query: 87 SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK------------------------ 122
SI++D K GSL A ++FN + +K
Sbjct: 241 RKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300
Query: 123 -------------DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLH 169
D++ +SA+I + K G A L EM+Q G+ P+ VT+TS++
Sbjct: 301 GAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLID 360
Query: 170 ACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK 225
+D+ + M+ P + + +I+ +A +DD L R M ++
Sbjct: 361 GFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR 416
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 114/229 (49%), Gaps = 8/229 (3%)
Query: 5 CNCG--NLSYKMFMKTSKKRTAP----WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
CN G + K+ K++ +P ++ ++ F+ REA QL K+M+ + P+
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
T+NSL+ + L++A+ + +I G + +IL++ Y K + +F
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428
Query: 119 IPLKD--KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGL 176
+ L+ + + ++ ++ + + G E+A LF EMV V+P+ V++ +L G
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488
Query: 177 VDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK 225
+++ L +F + K + + Y II + A ++DDA++L ++P+K
Sbjct: 489 LEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLK 537
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 113/252 (44%), Gaps = 11/252 (4%)
Query: 5 CNCGNLSY------KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
C C LSY K+ + T +N +L+G EA++L +M+ +P
Sbjct: 134 CRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTL 193
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
T N+L+ + + A+ + ++ +GF ++++ K G A +
Sbjct: 194 ITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 119 IPLKD--KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGL 176
+ ++ D + +S II K G + A +LFNEM G K + +T+ +++ + G
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 177 VDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM---PIKPNHAVWGA 233
D+G L + M+K I P V ++ +ID + G+L +A L++ M I PN + +
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNS 373
Query: 234 LLGACVSHENVE 245
L+ +E
Sbjct: 374 LIDGFCKENRLE 385
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 103/260 (39%), Gaps = 40/260 (15%)
Query: 18 TSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQA 77
T R + LS + A +A+ LF+ M+ P FN L A A +
Sbjct: 48 TFSDRNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELV 107
Query: 78 MNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHH---------------IFNI---- 118
+ + + G + + SI+++ + +C L YA IFN
Sbjct: 108 LALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNG 167
Query: 119 ----------IPLKDK--------DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPN 160
+ L D+ +I + ++ +G AV L + MV++G +PN
Sbjct: 168 LCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPN 227
Query: 161 QVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIR 220
+VT+ VL+ G + L + M + +I Y+ IID L + G LD+A+NL
Sbjct: 228 EVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFN 287
Query: 221 TMPIKPNHA---VWGALLGA 237
M IK A + L+G
Sbjct: 288 EMEIKGFKADIITYNTLIGG 307
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 99/255 (38%), Gaps = 41/255 (16%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIR 86
N +++G N +A+ L +M+ QP+ T+ +L AM + +
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 87 SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK------------------------ 122
SI++D K GSL A ++FN + +K
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDD 316
Query: 123 -------------DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLH 169
+++ +S +I ++ K G A L EM+Q G+ PN +T+ S++
Sbjct: 317 GAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID 376
Query: 170 ACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK---P 226
++E + + M+ P + + +I+ +A R+DD L R M ++
Sbjct: 377 GFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIA 436
Query: 227 NHAVWGALL-GACVS 240
N + L+ G C S
Sbjct: 437 NTVTYNTLVQGFCQS 451
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 130/275 (47%), Gaps = 15/275 (5%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
++ V++G+ + +L + M + ++P++ + S++ + L +A +I
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHGHGE 143
R G L V + L+D + K G + A F + +D D++ ++AII+ + + G
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
A LF+EM G++P+ VTFT +++ G + + + M++ P V YT +I
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 204 DLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELGEVAARWTFELEP- 259
D L + G LD A L+ M ++PN + +++ N+ E A + E E
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI---EEAVKLVGEFEAA 520
Query: 260 ---ENTGNYILLANLYAAVGRWRDVEKVRDMVNEV 291
+T Y L + Y G +++K ++++ E+
Sbjct: 521 GLNADTVTYTTLMDAYCKSG---EMDKAQEILKEM 552
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 117/243 (48%), Gaps = 13/243 (5%)
Query: 5 CNCGNL--SYKMFMKTSKKRTAP----WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
C G++ + K F + + P + A++SGF EA +LF +M + ++PD+
Sbjct: 362 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 421
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN- 117
TF L+ Y +K A +H ++I++G + + L+D K G L A+ + +
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 118 --IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVG 175
I L+ +I +++I+ K G+ E AV L E +G+ + VT+T+++ A G
Sbjct: 482 MWKIGLQ-PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 176 LVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM---PIKPNHAVWG 232
+D+ + + ML + P + + +++ G L+D L+ M I PN +
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 233 ALL 235
+L+
Sbjct: 601 SLV 603
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 118/276 (42%), Gaps = 21/276 (7%)
Query: 23 TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHC 82
T + ++ GF R A + F +M D+ PD T+ +++ + + D+ +A
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK--- 407
Query: 83 YLIRSGFLYRLEVASI----LVDIYSKCGSLGYAHHIFN--IIPLKDKDIIIWSAIIAAY 136
L F LE S+ L++ Y K G + A + N I +++ ++ +I
Sbjct: 408 -LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 137 GKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLV 196
K G + A L +EM + G++PN T+ S+++ G ++E + L +
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 197 DHYTCIIDLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELGEVAARW 253
YT ++D ++G +D A +++ M ++P + L+ H +E GE W
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 254 TFE--LEPENT------GNYILLANLYAAVGRWRDV 281
+ P T Y + NL AA ++D+
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 8/212 (3%)
Query: 88 GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGEMA 145
G + + +I++ + G + AHH+ ++ LK D+I +S ++ Y + G +
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDL 205
L M + G+KPN + S++ + + E F M++ I+P YT +ID
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 206 LGRAGRLDDAYNLIRTM---PIKPNHAVWGALL-GACVSHENVELGEVAAR-WTFELEPE 260
+ G + A M I P+ + A++ G C + VE G++ + LEP+
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 261 NTGNYILLANLYAAVGRWRDVEKVRDMVNEVG 292
+ + L N Y G +D +V + + + G
Sbjct: 421 SV-TFTELINGYCKAGHMKDAFRVHNHMIQAG 451
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 130/275 (47%), Gaps = 15/275 (5%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
++ V++G+ + +L + M + ++P++ + S++ + L +A +I
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHGHGE 143
R G L V + L+D + K G + A F + +D D++ ++AII+ + + G
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
A LF+EM G++P+ VTFT +++ G + + + M++ P V YT +I
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 204 DLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELGEVAARWTFELEP- 259
D L + G LD A L+ M ++PN + +++ N+ E A + E E
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI---EEAVKLVGEFEAA 520
Query: 260 ---ENTGNYILLANLYAAVGRWRDVEKVRDMVNEV 291
+T Y L + Y G +++K ++++ E+
Sbjct: 521 GLNADTVTYTTLMDAYCKSG---EMDKAQEILKEM 552
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 117/243 (48%), Gaps = 13/243 (5%)
Query: 5 CNCGNL--SYKMFMKTSKKRTAP----WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
C G++ + K F + + P + A++SGF EA +LF +M + ++PD+
Sbjct: 362 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 421
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN- 117
TF L+ Y +K A +H ++I++G + + L+D K G L A+ + +
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 118 --IIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVG 175
I L+ +I +++I+ K G+ E AV L E +G+ + VT+T+++ A G
Sbjct: 482 MWKIGLQ-PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 176 LVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM---PIKPNHAVWG 232
+D+ + + ML + P + + +++ G L+D L+ M I PN +
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 233 ALL 235
+L+
Sbjct: 601 SLV 603
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 118/276 (42%), Gaps = 21/276 (7%)
Query: 23 TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHC 82
T + ++ GF R A + F +M D+ PD T+ +++ + + D+ +A
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK--- 407
Query: 83 YLIRSGFLYRLEVASI----LVDIYSKCGSLGYAHHIFN--IIPLKDKDIIIWSAIIAAY 136
L F LE S+ L++ Y K G + A + N I +++ ++ +I
Sbjct: 408 -LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 137 GKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLV 196
K G + A L +EM + G++PN T+ S+++ G ++E + L +
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 197 DHYTCIIDLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELGEVAARW 253
YT ++D ++G +D A +++ M ++P + L+ H +E GE W
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 254 TFE--LEPENT------GNYILLANLYAAVGRWRDV 281
+ P T Y + NL AA ++D+
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 8/212 (3%)
Query: 88 GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGEMA 145
G + + +I++ + G + AHH+ ++ LK D+I +S ++ Y + G +
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDL 205
L M + G+KPN + S++ + + E F M++ I+P YT +ID
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 206 LGRAGRLDDAYNLIRTM---PIKPNHAVWGALL-GACVSHENVELGEVAAR-WTFELEPE 260
+ G + A M I P+ + A++ G C + VE G++ + LEP+
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 261 NTGNYILLANLYAAVGRWRDVEKVRDMVNEVG 292
+ + L N Y G +D +V + + + G
Sbjct: 421 SV-TFTELINGYCKAGHMKDAFRVHNHMIQAG 451
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 109/221 (49%), Gaps = 5/221 (2%)
Query: 20 KKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMN 79
K T +N ++S F EA+++F++M + +PD TFNSL+ + ++K A+
Sbjct: 456 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 515
Query: 80 IHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDK--DIIIWSAIIAAYG 137
+ +I G + + L++ + + G + A + N + + D I ++++I
Sbjct: 516 LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLC 575
Query: 138 KHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVD 197
+ G + A SLF +M++ G P+ ++ +++ G+V+E + + M+ P +
Sbjct: 576 RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 635
Query: 198 HYTCIIDLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALL 235
+ +I+ L RAGR++D + R + I P+ + L+
Sbjct: 636 TFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 134/318 (42%), Gaps = 32/318 (10%)
Query: 3 AKCNCGN----LSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
+KCN N L +MF+ +N V+ G EA ++ +ML+ PD+
Sbjct: 263 SKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDD 322
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI--- 115
T+ L+ + + A ++ + + + + + L+ + G L A +
Sbjct: 323 ITYGYLMNGLCKIGRVDAAKDLFYRIPKP----EIVIFNTLIHGFVTHGRLDDAKAVLSD 378
Query: 116 ----FNIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHAC 171
+ I+P D+ ++++I Y K G +A+ + ++M G KPN ++T ++
Sbjct: 379 MVTSYGIVP----DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGF 434
Query: 172 SHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP---IKPNH 228
+G +DE ++ M + P + C+I + R+ +A + R MP KP+
Sbjct: 435 CKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDV 494
Query: 229 AVWGALL-GACVSHENVELGEVA-ARWTFE--LEPENTGNYILLANLYAAVGRWRDVEKV 284
+ +L+ G C E+ E+ A W + N + L A R ++++
Sbjct: 495 YTFNSLISGLC------EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEA 548
Query: 285 RDMVNEVGLRKLPAQSLV 302
R +VNE+ + P +
Sbjct: 549 RKLVNEMVFQGSPLDEIT 566
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 107/224 (47%), Gaps = 5/224 (2%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIR 86
N++L+GF H + EA+ L QM+ QPD TF +L+ +A+ + ++
Sbjct: 139 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 198
Query: 87 SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGEM 144
G L +++ K G A ++ N + + D++I+S +I + K+ H +
Sbjct: 199 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDD 258
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIID 204
A++LF EM G++P+ T++S++ + G + L ML+ I P V + +ID
Sbjct: 259 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318
Query: 205 LLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGACVSHENVE 245
+ G+L +A L M I PN + +L+ H+ ++
Sbjct: 319 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 108/219 (49%), Gaps = 6/219 (2%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N+++ F EA +LF +M+ + P+ T+NSL+ + + L +A I ++
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHGHGE 143
L + + L++ + K + +F + + + + ++ +I + + +
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
A +F +MV GV PN +T+ ++L G +++ + +F+++ K + P + Y +
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMS 492
Query: 204 DLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALL-GAC 238
+ + +AG+++D ++L ++ +KP+ + ++ G C
Sbjct: 493 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFC 531
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 109/229 (47%), Gaps = 6/229 (2%)
Query: 23 TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHC 82
T + ++ G ++ A EA+ L ++M+V+ QPD T+ +++ + A+N+
Sbjct: 170 TVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLN 229
Query: 83 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHG 140
+ + + + S ++D K + A ++F + K D+ +S++I+ +G
Sbjct: 230 KMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 289
Query: 141 HGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYT 200
A L ++M++ + PN VTF S++ A + G + E LF M++ I P + Y
Sbjct: 290 RWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349
Query: 201 CIIDLLGRAGRLDDAYNLIRTMPIK---PNHAVWGALL-GACVSHENVE 245
+I+ RLD+A + M K P+ + L+ G C + + V+
Sbjct: 350 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 98/209 (46%), Gaps = 2/209 (0%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
NL +M K + +++++S + +A +L ML + P+ TFNSL+ A+
Sbjct: 261 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAF 320
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDI 126
A L +A + +I+ + + L++ + L A IF ++ KD D+
Sbjct: 321 AKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 380
Query: 127 IIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQF 186
+ ++ +I + K + LF +M + G+ N VT+T+++H D +F+
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ 440
Query: 187 MLKHHIIPLVDHYTCIIDLLGRAGRLDDA 215
M+ + P + Y ++D L + G+L+ A
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 97/213 (45%), Gaps = 4/213 (1%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
+M +K + + AV++G A+ L +M ++ D +++++ +
Sbjct: 195 RMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYR 254
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWS 130
+ A+N+ + G + S L+ G A + + + + + +++ ++
Sbjct: 255 HVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFN 314
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHA-CSHVGLVDEGLSLFQFMLK 189
++I A+ K G A LF+EM+Q + PN VT+ S+++ C H L DE +F M+
Sbjct: 315 SLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL-DEAQQIFTLMVS 373
Query: 190 HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM 222
+P V Y +I+ +A ++ D L R M
Sbjct: 374 KDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 97/217 (44%), Gaps = 5/217 (2%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N +++ S A+ + +M+ P T NSLL + + +A+ + ++
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGE 143
G+ + LV + A + + +K D++ + A+I K G +
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
+A++L N+M + ++ + V +++V+ + VD+ L+LF M I P V Y+ +I
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 204 DLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGA 237
L GR DA L+ M I PN + +L+ A
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 84/199 (42%), Gaps = 2/199 (1%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N +++GF + ++LF+ M + + T+ +L+ + +D A + ++
Sbjct: 383 YNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV 442
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGE 143
G + + L+D K G L A +F + + DI ++ + K G E
Sbjct: 443 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVE 502
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
LF + GVKP+ + + +++ GL +E +LF M + +P Y +I
Sbjct: 503 DGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Query: 204 DLLGRAGRLDDAYNLIRTM 222
R G + LI+ M
Sbjct: 563 RAHLRDGDKAASAELIKEM 581
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 129/283 (45%), Gaps = 11/283 (3%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIR 86
+++L+G+ H EA+ L QM V + QP+ TFN+L+ + +A+ + ++
Sbjct: 154 SSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVA 213
Query: 87 SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGEM 144
G L +V+ K G + A + + + D++I++ II A + +
Sbjct: 214 RGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVND 273
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIID 204
A++LF EM G++PN VT+ S++ + G + L M++ I P V ++ +ID
Sbjct: 274 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 333
Query: 205 LLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELGEVAARWTFEL--EP 259
+ G+L +A L M I P+ + +L+ H+ ++ A+ FEL
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD----EAKHMFELMISK 389
Query: 260 ENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLV 302
+ N + L + + VE+ ++ E+ R L ++
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 432
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 124/264 (46%), Gaps = 11/264 (4%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
++A++ F+ EA +L+ +M+ + PD T++SL+ + + L +A ++ +I
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHGHGE 143
+ + L+ + K + +F + + + + ++ +I + G +
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
MA +F +MV GV P+ +T++ +L G +++ L +F+++ K + P + Y +I
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 204 DLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALL-GACVSHENVELGEVAARWTFELEP 259
+ + +AG+++D ++L ++ +KPN ++ ++ G C E + +
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 260 ENTGNYILLANLYAAVGRWRDVEK 283
N+G Y L R RD +K
Sbjct: 568 PNSGTYNTLIR-----ARLRDGDK 586
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 2/199 (1%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N ++ GF E ++LF++M + + T+N+L+ D A I ++
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGE 143
G + SIL+D K G L A +F + + DI ++ +I K G E
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
LF + GVKPN + +T+++ GL +E +LF+ M + +P Y +I
Sbjct: 518 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Query: 204 DLLGRAGRLDDAYNLIRTM 222
R G + LI+ M
Sbjct: 578 RARLRDGDKAASAELIKEM 596
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 112/256 (43%), Gaps = 9/256 (3%)
Query: 41 EAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILV 100
+A+ LF +M+ P FN LL A A + +++ + Y L +IL+
Sbjct: 63 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILI 122
Query: 101 DIYSKCGSLGYAHHIF-NIIPLK-DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVK 158
+ + + L A + ++ L + DI+ S+++ Y AV+L ++M +
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ 182
Query: 159 PNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNL 218
PN VTF +++H E ++L M+ P + Y +++ L + G +D A +L
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 219 IRTM---PIKPNHAVWGALLGACVSHENVE--LGEVAARWTFELEPENTGNYILLANLYA 273
++ M I+ + ++ ++ A +++NV L + P N Y L
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP-NVVTYNSLIRCLC 301
Query: 274 AVGRWRDVEK-VRDMV 288
GRW D + + DM+
Sbjct: 302 NYGRWSDASRLLSDMI 317
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 122/269 (45%), Gaps = 7/269 (2%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
++A++ F+ EA +L+ +M+ + PD T+NSL+ + L +A + ++
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHGHGE 143
G + SIL++ Y K + +F I K + I ++ ++ + + G
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 437
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
A LF EMV GV P+ VT+ +L G +++ L +F+ M K + + Y II
Sbjct: 438 AAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIII 497
Query: 204 DLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELGEVAARWTFE--LE 258
+ A ++DDA++L ++ +KP+ + ++G ++ ++ R E
Sbjct: 498 HGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCT 557
Query: 259 PENTGNYILLANLYAAVGRWRDVEKVRDM 287
P++ IL+ G VE + +M
Sbjct: 558 PDDFTYNILIRAHLGGSGLISSVELIEEM 586
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 137/283 (48%), Gaps = 18/283 (6%)
Query: 23 TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHC 82
T ++ +++GF EA+ L +M+ +PD T ++L+ + + +A+ +
Sbjct: 140 TITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLID 199
Query: 83 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHG 140
++ GF +++ K G+ A +F + ++ ++ +S +I + K G
Sbjct: 200 RMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDG 259
Query: 141 HGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYT 200
+ A+SLFNEM G+K + VT++S++ + G D+G + + M+ +IIP V ++
Sbjct: 260 SFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFS 319
Query: 201 CIIDLLGRAGRLDDA---YNLIRTMPIKPNHAVWGALL-GACVSHENVELGEVAARWTFE 256
+ID+ + G+L +A YN + T I P+ + +L+ G C EN L E A F+
Sbjct: 320 ALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC--KENC-LHE--ANQMFD 374
Query: 257 L------EPENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGL 293
L EP+ Y +L N Y R D ++ ++ GL
Sbjct: 375 LMVSKGCEPDIV-TYSILINSYCKAKRVDDGMRLFREISSKGL 416
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 98/237 (41%), Gaps = 40/237 (16%)
Query: 41 EAIQLFKQMLVEDVQPDNATFNSLLPA------YAILADLKQAMN--------------I 80
+AI LF+ M+ P FN L A Y ++ + M I
Sbjct: 53 DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 112
Query: 81 HCYLIRSGFLYRLEVA---------------SILVDIYSKCGSLGYAHHIFN-IIPLKDK 124
+CY + L+ V S LV+ + G + A + + ++ +K +
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 125 -DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSL 183
D++ S +I G A+ L + MV+ G +P++VT+ VL+ G L L
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 184 FQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALLGA 237
F+ M + +I V Y+ +ID L + G DDA +L M IK + + +L+G
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 113/244 (46%), Gaps = 11/244 (4%)
Query: 5 CNCG--NLSYKMFMKTSKKRTAP----WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDN 58
CN G + K+ K++ P ++ ++ F+ REA +L K+M+ + PD
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
T+ SL+ + L +A + ++ G + +IL++ Y K + +F
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Query: 119 IPLKD--KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGL 176
+ L+ D + ++ +I + + G +A LF EMV V PN VT+ +L G
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Query: 177 VDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP---IKPNHAVWGA 233
++ L +F+ + K + + Y II + A ++DDA++L ++P +KP +
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548
Query: 234 LLGA 237
++G
Sbjct: 549 MIGG 552
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 120/272 (44%), Gaps = 7/272 (2%)
Query: 23 TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHC 82
T ++ +++G EA++L +M+ +PD T N+L+ + +AM +
Sbjct: 158 TITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLID 217
Query: 83 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHG 140
++ G ++++ K G A + + ++ D + +S II KHG
Sbjct: 218 KMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHG 277
Query: 141 HGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYT 200
+ A +LFNEM G+ N +T+ ++ + G D+G L + M+K I P V ++
Sbjct: 278 SLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFS 337
Query: 201 CIIDLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALL-GACVSHENVELGEVAARWTFE 256
+ID + G+L +A L + M I P+ + +L+ G C + + ++ +
Sbjct: 338 VLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 397
Query: 257 LEPENTGNYILLANLYAAVGRWRD-VEKVRDM 287
N + +L N Y R D +E R M
Sbjct: 398 GCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 129/297 (43%), Gaps = 18/297 (6%)
Query: 6 NCGN-LSY---KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATF 61
NC N LS+ + F S + + + SG + + A +AI LF+ M+ P F
Sbjct: 33 NCPNELSFCCERGFSAFSDRNLSYRERLRSGLV-DIKADDAIDLFRDMIHSRPLPTVIDF 91
Query: 62 NSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF-NIIP 120
+ L A A + + + G + L SI+++ + +C L A II
Sbjct: 92 SRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIK 151
Query: 121 LK-DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDE 179
L + + I +S +I G A+ L + MV+ G KP+ +T ++++ G E
Sbjct: 152 LGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAE 211
Query: 180 GLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALLG 236
+ L M+++ P Y +++++ ++G+ A L+R M IK + + ++
Sbjct: 212 AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 237 ACVSHENVELGEVAARWTFELEPENTGNYILLANL----YAAVGRWRDVEK-VRDMV 288
H ++ + A E+E + I+ N+ + GRW D K +RDM+
Sbjct: 272 GLCKHGSL---DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 105/246 (42%), Gaps = 11/246 (4%)
Query: 23 TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHC 82
T + +++ GF + +A Q+ M+ + P+ TFN L+ Y + + +
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 83 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHG 140
+ G + + L+ + + G L A +F + + +I+ + ++ +G
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487
Query: 141 HGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYT 200
E A+ +F ++ +S ++ + + ++H + VD+ LF + + P V Y
Sbjct: 488 ESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYN 547
Query: 201 CIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWG--------ALLGACVSHENVELGEVAAR 252
+I L + G L +A L R M + HA G A LG + ++V+L E R
Sbjct: 548 IMIGGLCKKGPLSEAELLFRKME-EDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 606
Query: 253 WTFELE 258
F ++
Sbjct: 607 CGFSVD 612
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 7/217 (3%)
Query: 13 KMFMKTSKKRTAP----WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
K+F R P +NA++S + LA EA +LF ++ ++ PD T+NSLL A+
Sbjct: 318 KVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAF 377
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI---IPLKDKD 125
A + ++ ++ + + GF + ++ +Y K G L A ++ + ++ D
Sbjct: 378 ARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPD 437
Query: 126 IIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQ 185
I ++ +I + GK A +L +EM+ G+KP T+++++ + G +E F
Sbjct: 438 AITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFS 497
Query: 186 FMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM 222
ML+ P Y+ ++D+L R A+ L R M
Sbjct: 498 CMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDM 534
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 97/200 (48%), Gaps = 6/200 (3%)
Query: 42 AIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVD 101
A++L + ++PD T+N+LL A + ++L A+ + + L + ++
Sbjct: 281 AVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMIS 340
Query: 102 IYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKP 159
+Y +CG A +F + LK D + +++++ A+ + + E ++ +M + G
Sbjct: 341 VYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGK 400
Query: 160 NQVTFTSVLHACSHVGLVDEGLSLFQFMLK-HHIIPLVDHYTCIIDLLGRAGRLDDAYNL 218
+++T+ +++H G +D L L++ M P YT +ID LG+A R +A L
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAAL 460
Query: 219 IRTM---PIKPNHAVWGALL 235
+ M IKP + AL+
Sbjct: 461 MSEMLDVGIKPTLQTYSALI 480
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 7/161 (4%)
Query: 92 RLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHG--HGEMAVS 147
R++V + ++ +YS+ G A + + + + D+I ++ +I A K G +AV
Sbjct: 224 RVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVE 283
Query: 148 LFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLG 207
L + + SG++P+ +T+ ++L ACS +D + +F+ M H P + Y +I + G
Sbjct: 284 LLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYG 343
Query: 208 RAGRLDDAYNLIRTMPIK---PNHAVWGALLGACVSHENVE 245
R G +A L + +K P+ + +LL A N E
Sbjct: 344 RCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTE 384
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 28/227 (12%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N +LS +S A+++F+ M QPD T+N+++ Y +A + L
Sbjct: 300 YNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELE 359
Query: 86 RSGF----------LY---RLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAI 132
GF LY R + ++Y + +G+ KD + ++ I
Sbjct: 360 LKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFG-----------KDEMTYNTI 408
Query: 133 IAAYGKHGHGEMAVSLFNEMVQ-SGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH 191
I YGK G ++A+ L+ +M SG P+ +T+T ++ + E +L ML
Sbjct: 409 IHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVG 468
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALL 235
I P + Y+ +I +AG+ ++A + M KP++ + +L
Sbjct: 469 IKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVML 515
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 7/224 (3%)
Query: 6 NCGNLSYKMFMK---TSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFN 62
N +L+ ++F + T R +NA++ + + +A +L M PD +FN
Sbjct: 205 NQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFN 264
Query: 63 SLLPAYAILADLKQAMNIHCY-LIR-SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIP 120
+L+ A L + + ++R SG + L+ S+ +L A +F +
Sbjct: 265 TLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDME 324
Query: 121 LK--DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVD 178
D+ ++A+I+ YG+ G A LF E+ G P+ VT+ S+L+A + +
Sbjct: 325 AHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTE 384
Query: 179 EGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM 222
+ ++Q M K Y II + G+ G+LD A L + M
Sbjct: 385 KVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDM 428
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 3/150 (2%)
Query: 76 QAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDII---IWSAI 132
+A + L SG V +V +Y K G AH + N K +++ I
Sbjct: 699 EASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDI 758
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
I AYGK + A S+ + QSG P+ T+ S++ A + G + ++F M++
Sbjct: 759 IEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGP 818
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTM 222
P V+ ++ L GRL++ Y ++ +
Sbjct: 819 SPTVESINILLHALCVDGRLEELYVVVEEL 848
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 101/218 (46%), Gaps = 3/218 (1%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N ++ G L +A++LF +M + V+ D T+NSL+ A + ++
Sbjct: 177 YNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMV 236
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGE 143
+ + + ++D++ K G A ++ + + D D+ ++++I HG +
Sbjct: 237 MRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVD 296
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
A + + MV G P+ VT+ ++++ VDEG LF+ M + ++ Y II
Sbjct: 297 EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII 356
Query: 204 DLLGRAGRLDDAYNLIRTMPIKPNHAVWGALL-GACVS 240
+AGR D A + M +PN + LL G C++
Sbjct: 357 QGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMN 394
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 111/243 (45%), Gaps = 9/243 (3%)
Query: 6 NCGNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLL 65
+ L M M+ + AV+ F+ EA++L+++M V PD T+NSL+
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 66 PAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD-- 123
+ + +A + ++ G L + + L++ + K + +F + +
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346
Query: 124 KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSL 183
D I ++ II Y + G + A +F+ M +PN T++ +L+ V++ L L
Sbjct: 347 GDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVL 403
Query: 184 FQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALL-GACV 239
F+ M K I + Y +I + + G ++DA++L R++ +KP+ + ++ G C
Sbjct: 404 FENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463
Query: 240 SHE 242
+
Sbjct: 464 KRQ 466
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 108/247 (43%), Gaps = 21/247 (8%)
Query: 14 MFMKTSKKRTAP----WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYA 69
+F K + R P ++ VLS + I LF M V + D ++N ++
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115
Query: 70 ILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDK----- 124
+ A+++ +++ G+ + S L++ + + + +F+ I L K
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQ------GNRVFDAIDLVSKMEEMG 169
Query: 125 ---DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
D++I++ II K G AV LF+ M + GV+ + VT+ S++ G +
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 182 SLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALLGAC 238
L + M+ I+P V +T +ID+ + G+ +A L M + P+ + +L+
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 239 VSHENVE 245
H V+
Sbjct: 290 CMHGRVD 296
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 97/214 (45%), Gaps = 5/214 (2%)
Query: 13 KMFMKTSKKRTAP----WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
K++ + +++ P +N++++G + EA Q+ M+ + PD T+N+L+ +
Sbjct: 265 KLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGF 324
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIII 128
+ + + + + G + + ++ Y + G A IF+ + + +I
Sbjct: 325 CKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR-PNIRT 383
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML 188
+S ++ + E A+ LF M +S ++ + T+ V+H +G V++ LF+ +
Sbjct: 384 YSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLS 443
Query: 189 KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM 222
+ P V YT +I R + D + L R M
Sbjct: 444 CKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM 477
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 133/272 (48%), Gaps = 15/272 (5%)
Query: 32 GFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLY 91
G + + RE + + M +P + + +L+ A++ + + + + G+
Sbjct: 142 GCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEP 201
Query: 92 RLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGEMAVSLF 149
+ + + L+ ++K G + A + + + D DI++++ I ++GK G +MA F
Sbjct: 202 TVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFF 261
Query: 150 NEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRA 209
+E+ +G+KP++VT+TS++ +DE + +F+ + K+ +P Y +I G A
Sbjct: 262 HEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSA 321
Query: 210 GRLDDAYNLIRTMPIK---PNHAVWGALLGACVSHENVELGEV--AARWTFELEPE---N 261
G+ D+AY+L+ K P+ + +L C+ ++G+V A + E++ + N
Sbjct: 322 GKFDEAYSLLERQRAKGSIPSVIAYNCIL-TCLR----KMGKVDEALKVFEEMKKDAAPN 376
Query: 262 TGNYILLANLYAAVGRWRDVEKVRDMVNEVGL 293
Y +L ++ G+ ++RD + + GL
Sbjct: 377 LSTYNILIDMLCRAGKLDTAFELRDSMQKAGL 408
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 122/286 (42%), Gaps = 17/286 (5%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
KM + + + +++ F ++ + +++K M+ ++ PD N+ +
Sbjct: 472 KMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAG 531
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDK----DIII 128
+ ++ + + F+ SIL+ K G + +F +K++ D
Sbjct: 532 EPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELF--YSMKEQGCVLDTRA 589
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML 188
++ +I + K G A L EM G +P VT+ SV+ + + +DE LF+
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 649
Query: 189 KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK---PNHAVWGALLGACVSHENVE 245
I V Y+ +ID G+ GR+D+AY ++ + K PN W +LL A V E +
Sbjct: 650 SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEIN 709
Query: 246 LGEVAARWTFELE-PENTGNYILLANLYAAVGR-------WRDVEK 283
V + EL+ N Y +L N V + W++++K
Sbjct: 710 EALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQK 755
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 107/245 (43%), Gaps = 17/245 (6%)
Query: 4 KCNCGNLSYKMFMKTSKK----RTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
K N +Y++F ++ T +N V+ GF +A QL ++M + +P
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLE----VASILVDIYSKCGSLGYAHHI 115
T+ S++ A + L +A L R+E + S L+D + K G + A+ I
Sbjct: 624 TYGSVIDGLAKIDRLDEAY----MLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 116 FNIIPLK--DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSH 173
+ K ++ W++++ A K A+ F M + PNQVT+ +++
Sbjct: 680 LEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCK 739
Query: 174 VGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDA---YNLIRTMPIKPNHAV 230
V ++ +Q M K + P YT +I L +AG + +A ++ + P+ A
Sbjct: 740 VRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSAC 799
Query: 231 WGALL 235
+ A++
Sbjct: 800 YNAMI 804
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 93/225 (41%), Gaps = 7/225 (3%)
Query: 4 KCNCGNLSYKMFMKTSKKRTAP----WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNA 59
K N + + +MF K R P +N ++ G+ EA L ++ + P
Sbjct: 285 KANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVI 344
Query: 60 TFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNII 119
+N +L + + +A+ + + + L +IL+D+ + G L A + + +
Sbjct: 345 AYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSM 403
Query: 120 PLKD--KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLV 177
++ + ++ K + A ++F EM P+++TF S++ VG V
Sbjct: 404 QKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRV 463
Query: 178 DEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM 222
D+ +++ ML YT +I GR +D + + + M
Sbjct: 464 DDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 114/230 (49%), Gaps = 9/230 (3%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
+M + T +N ++ + + EA+ +F QM +PD T+ +L+ +A
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDK----DIII 128
L AM+++ + G S++++ K G L AH +F + D+ +++
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLF--CEMVDQGCTPNLVT 506
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML 188
++ ++ + K + + A+ L+ +M +G +P++VT++ V+ H G ++E ++F M
Sbjct: 507 YNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQ 566
Query: 189 KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALL 235
+ + IP Y ++DL G+AG ++ A+ + M ++PN +LL
Sbjct: 567 QKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLL 616
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 5/207 (2%)
Query: 44 QLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIY 103
+L +M+ + QP+ T+N L+ +Y L +AMN+ + +G L+DI+
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 104 SKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQ 161
+K G L A ++ + D +S II GK GH A LF EMV G PN
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 162 VTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRT 221
VT+ ++ + L L++ M P Y+ ++++LG G L++A +
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE 564
Query: 222 MPIK---PNHAVWGALLGACVSHENVE 245
M K P+ V+G L+ NVE
Sbjct: 565 MQQKNWIPDEPVYGLLVDLWGKAGNVE 591
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
Query: 42 AIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVD 101
A +LF +M+ + P+ T+N ++ +A + + A+ ++ + +GF SI+++
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Query: 102 IYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKP 159
+ CG L A +F + K+ D ++ ++ +GK G+ E A + M+ +G++P
Sbjct: 548 VLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Query: 160 NQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
N T S+L V + E L Q ML + P + YT ++
Sbjct: 608 NVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Query: 107 GSLGYAHHIFNIIPLKDK--------DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVK 158
G+LG A I L D+ + + ++ +I +YG+ + A+++FN+M ++G K
Sbjct: 372 GNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCK 431
Query: 159 PNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNL 218
P++VT+ +++ + G +D + ++Q M + P Y+ II+ LG+AG L A+ L
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKL 491
Query: 219 IRTM 222
M
Sbjct: 492 FCEM 495
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 114/230 (49%), Gaps = 9/230 (3%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
+M + T +N ++ + + EA+ +F QM +PD T+ +L+ +A
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDK----DIII 128
L AM+++ + G S++++ K G L AH +F + D+ +++
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLF--CEMVDQGCTPNLVT 506
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML 188
++ ++ + K + + A+ L+ +M +G +P++VT++ V+ H G ++E ++F M
Sbjct: 507 YNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQ 566
Query: 189 KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALL 235
+ + IP Y ++DL G+AG ++ A+ + M ++PN +LL
Sbjct: 567 QKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLL 616
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 5/207 (2%)
Query: 44 QLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIY 103
+L +M+ + QP+ T+N L+ +Y L +AMN+ + +G L+DI+
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 104 SKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQ 161
+K G L A ++ + D +S II GK GH A LF EMV G PN
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 162 VTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRT 221
VT+ ++ + L L++ M P Y+ ++++LG G L++A +
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE 564
Query: 222 MPIK---PNHAVWGALLGACVSHENVE 245
M K P+ V+G L+ NVE
Sbjct: 565 MQQKNWIPDEPVYGLLVDLWGKAGNVE 591
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
Query: 42 AIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVD 101
A +LF +M+ + P+ T+N ++ +A + + A+ ++ + +GF SI+++
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Query: 102 IYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKP 159
+ CG L A +F + K+ D ++ ++ +GK G+ E A + M+ +G++P
Sbjct: 548 VLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Query: 160 NQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
N T S+L V + E L Q ML + P + YT ++
Sbjct: 608 NVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Query: 107 GSLGYAHHIFNIIPLKDK--------DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVK 158
G+LG A I L D+ + + ++ +I +YG+ + A+++FN+M ++G K
Sbjct: 372 GNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCK 431
Query: 159 PNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNL 218
P++VT+ +++ + G +D + ++Q M + P Y+ II+ LG+AG L A+ L
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKL 491
Query: 219 IRTM 222
M
Sbjct: 492 FCEM 495
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 114/230 (49%), Gaps = 9/230 (3%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
+M + T +N ++ + + EA+ +F QM +PD T+ +L+ +A
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDK----DIII 128
L AM+++ + G S++++ K G L AH +F + D+ +++
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLF--CEMVDQGCTPNLVT 506
Query: 129 WSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML 188
++ ++ + K + + A+ L+ +M +G +P++VT++ V+ H G ++E ++F M
Sbjct: 507 YNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQ 566
Query: 189 KHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALL 235
+ + IP Y ++DL G+AG ++ A+ + M ++PN +LL
Sbjct: 567 QKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLL 616
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 5/207 (2%)
Query: 44 QLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIY 103
+L +M+ + QP+ T+N L+ +Y L +AMN+ + +G L+DI+
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 104 SKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQ 161
+K G L A ++ + D +S II GK GH A LF EMV G PN
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 162 VTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRT 221
VT+ ++ + L L++ M P Y+ ++++LG G L++A +
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE 564
Query: 222 MPIK---PNHAVWGALLGACVSHENVE 245
M K P+ V+G L+ NVE
Sbjct: 565 MQQKNWIPDEPVYGLLVDLWGKAGNVE 591
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
Query: 42 AIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVD 101
A +LF +M+ + P+ T+N ++ +A + + A+ ++ + +GF SI+++
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Query: 102 IYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKP 159
+ CG L A +F + K+ D ++ ++ +GK G+ E A + M+ +G++P
Sbjct: 548 VLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Query: 160 NQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
N T S+L V + E L Q ML + P + YT ++
Sbjct: 608 NVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Query: 107 GSLGYAHHIFNIIPLKDK--------DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVK 158
G+LG A I L D+ + + ++ +I +YG+ + A+++FN+M ++G K
Sbjct: 372 GNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCK 431
Query: 159 PNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNL 218
P++VT+ +++ + G +D + ++Q M + P Y+ II+ LG+AG L A+ L
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKL 491
Query: 219 IRTM 222
M
Sbjct: 492 FCEM 495
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 127/272 (46%), Gaps = 15/272 (5%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIR 86
+++L+G+ H +A+ L QM+ +PD TF +L+ + +A+ + +++
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 87 SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGEM 144
G L ++V+ K G + A ++ N + + +++I+S +I + K+ H +
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 278
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIID 204
A++LF EM GV+PN +T++S++ + + L M++ I P V + +ID
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338
Query: 205 LLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPE- 260
+ G+L +A L M I P+ + +L+ H+ ++ A+ FEL
Sbjct: 339 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD----EAKHMFELMISK 394
Query: 261 ----NTGNYILLANLYAAVGRWRD-VEKVRDM 287
N Y L N + R + VE R+M
Sbjct: 395 DCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 112/244 (45%), Gaps = 5/244 (2%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
NL +M K + +++++S + +A +L M+ + P+ TFN+L+ A+
Sbjct: 281 NLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAF 340
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDI 126
L +A ++ +I+ + S L++ + L A H+F ++ KD ++
Sbjct: 341 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 400
Query: 127 IIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQF 186
+ ++ +I + K + V LF EM Q G+ N VT+T+++H D +F+
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460
Query: 187 MLKHHIIPLVDHYTCIIDLLGRAGRLDDA---YNLIRTMPIKPNHAVWGALLGACVSHEN 243
M+ + P + Y ++D L + G+L+ A + ++ ++P + ++
Sbjct: 461 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 520
Query: 244 VELG 247
VE G
Sbjct: 521 VEDG 524
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/219 (19%), Positives = 111/219 (50%), Gaps = 6/219 (2%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+NA++ F+ EA +L+ +M+ + PD T++SL+ + + L +A ++ +I
Sbjct: 333 FNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 392
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHGHGE 143
+ + L++ + K + +F + + + + ++ +I + + +
Sbjct: 393 SKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 452
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
A +F +MV GV PN +T+ ++L G +++ + +F+++ + + P + Y +I
Sbjct: 453 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 512
Query: 204 DLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALL-GAC 238
+ + +AG+++D ++L ++ +KP+ ++ ++ G C
Sbjct: 513 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFC 551
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 122/274 (44%), Gaps = 9/274 (3%)
Query: 23 TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHC 82
+ + +L +H+ +AI LF M+ P FN LL A A + +++
Sbjct: 50 SGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGE 109
Query: 83 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF-NIIPLK-DKDIIIWSAIIAAYGKHG 140
+ R G + L +IL++ + + + A + ++ L + I+ S+++ Y
Sbjct: 110 KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 169
Query: 141 HGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYT 200
AV+L ++MV+ G +P+ +TFT+++H E ++L M++ P + Y
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 201 CIIDLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGACVS--HENVELGEVAARWTF 255
+++ L + G +D A+NL+ M I+ N ++ ++ + HE+ L
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 256 ELEPENTGNYILLANLYAAVGRWRDVEK-VRDMV 288
+ P N Y L + RW D + + DM+
Sbjct: 290 GVRP-NVITYSSLISCLCNYERWSDASRLLSDMI 322
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Query: 23 TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHC 82
T + ++ GF A +FKQM+ + V P+ T+N+LL L++AM +
Sbjct: 435 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE 494
Query: 83 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHG 140
YL RS + +I+++ K G + +F + LK D+II++ +I+ + + G
Sbjct: 495 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKG 554
Query: 141 HGEMAVSLFNEMVQSGVKPNQVT 163
E A +LF +M + G P+ T
Sbjct: 555 LKEEADALFRKMREDGPLPDSGT 577
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 77/183 (42%), Gaps = 2/183 (1%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
M K +N +++GF E ++LF++M + + T+ +L+ + D
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARD 450
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAII 133
A + ++ G + + L+D K G L A +F + + I++ I
Sbjct: 451 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 510
Query: 134 AAYG--KHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH 191
G K G E LF + GVKP+ + + +++ GL +E +LF+ M +
Sbjct: 511 MIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Query: 192 IIP 194
+P
Sbjct: 571 PLP 573
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 36/223 (16%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N +LS L E +L+ +ML + V PD TFN+L+ Y L + +A +LI
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
++G D D +++ I + + + A
Sbjct: 183 QAGC---------------------------------DPDYFTYTSFITGHCRRKEVDAA 209
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDL 205
+F EM Q+G N+V++T +++ +DE LSL M + P V YT +ID
Sbjct: 210 FKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDA 269
Query: 206 LGRAGRLDDAYNLIRTMP---IKPNHAVWGALLGACVSHENVE 245
L +G+ +A NL + M IKP+ ++ L+ + S + ++
Sbjct: 270 LCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLD 312
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 126/281 (44%), Gaps = 7/281 (2%)
Query: 14 MFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILAD 73
M K +NA++ F+ EA +L+ M+ + PD T+NSL+ + +
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 380
Query: 74 LKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWSA 131
L +A + +++ + + L+ + K + +F + + D + ++
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 132 IIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH 191
+I G + A +F +MV GV P+ +T++ +L + G +++ L +F +M K
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 192 IIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELGE 248
I + YT +I+ + +AG++DD ++L ++ +KPN + ++ S ++
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 560
Query: 249 VAARWTFELEP-ENTGNYILLANLYAAVG-RWRDVEKVRDM 287
+ E P N+G Y L + G + E +R+M
Sbjct: 561 ALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 127/281 (45%), Gaps = 7/281 (2%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIR 86
+++L+G+ H +A+ L QM+ +PD TF +L+ + +A+ + +++
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 87 SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGEM 144
G L ++V+ K G A ++ N + + D++I++ II + K+ H +
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 278
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIID 204
A++LF EM G++PN VT++S++ G + L M++ I P + + +ID
Sbjct: 279 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 338
Query: 205 LLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPEN 261
+ G+ +A L M I P+ + +L+ H+ L + + F + +
Sbjct: 339 AFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD--RLDKAKQMFEFMVSKDC 396
Query: 262 TGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLV 302
+ + L + + VE ++ E+ R L ++
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 437
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 125/276 (45%), Gaps = 9/276 (3%)
Query: 23 TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHC 82
+ + +L +H+ +AI LF M+ P FN LL A A + +++
Sbjct: 50 SGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGE 109
Query: 83 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF-NIIPLK-DKDIIIWSAIIAAYGKHG 140
+ R ++ L +IL++ + + + A + ++ L + I+ S+++ Y
Sbjct: 110 KMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 169
Query: 141 HGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYT 200
AV+L ++MV+ G +P+ +TFT+++H E ++L M++ P + Y
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 201 CIIDLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGACVSHENVE--LGEVAARWTF 255
+++ L + G D A NL+ M I+ + ++ ++ + + +V+ L T
Sbjct: 230 VVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 289
Query: 256 ELEPENTGNYILLANLYAAVGRWRDVEK-VRDMVNE 290
+ P N Y L + + GRW D + + DM+ +
Sbjct: 290 GIRP-NVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 102/242 (42%), Gaps = 5/242 (2%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
NL KM + +N ++ +A+ LFK+M + ++P+ T++SL+
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDI 126
A + +I L + L+D + K G A +++ + + D DI
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 127 IIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQF 186
+++++ + H + A +F MV P+ VT+ +++ V++G LF+
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425
Query: 187 MLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGACVSHEN 243
M ++ YT +I L G D+A + + M + P+ + LL ++
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485
Query: 244 VE 245
+E
Sbjct: 486 LE 487
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 124/269 (46%), Gaps = 7/269 (2%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+NA++ F+ EA +L M+ + PD T+NSL+ + + L +A + +++
Sbjct: 258 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 317
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHGHGE 143
L+ + L+ + K + +F + + D + ++ +I G +
Sbjct: 318 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 377
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
A +F +MV GV P+ +T++ +L + G +++ L +F +M K I + YT +I
Sbjct: 378 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 437
Query: 204 DLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELGEVAARWTFELEP- 259
+ + +AG++DD ++L ++ +KPN + ++ S ++ + E P
Sbjct: 438 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 497
Query: 260 ENTGNYILLANLYAAVG-RWRDVEKVRDM 287
++G Y L + G + E +R+M
Sbjct: 498 PDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 113/236 (47%), Gaps = 9/236 (3%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIR 86
+++L+G+ H +A+ L QM+ +PD TF +L+ + +A+ + +++
Sbjct: 84 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 143
Query: 87 SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGEM 144
G L ++V+ K G + A ++ N + + D++I++ II + K+ H +
Sbjct: 144 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 203
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIID 204
A++LF EM G++PN VT++S++ G + L M++ I P + + +ID
Sbjct: 204 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 263
Query: 205 LLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELGEVAARWTFEL 257
+ G+ +A L M I P+ + +L+ H+ ++ A+ FE
Sbjct: 264 AFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD----KAKQMFEF 315
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 113/251 (45%), Gaps = 12/251 (4%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
NL +M K + +++++S +A QL M+ + + P+ TFN+L+ A+
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 265
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDI 126
+A +H +I+ + + L++ + L A +F + KD D+
Sbjct: 266 VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL 325
Query: 127 IIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQF 186
++ +I + K E LF EM G+ + VT+T+++ H G D +F+
Sbjct: 326 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Query: 187 MLKHHIIPLVDHYTCIIDLLGRAGRLDDA---YNLIRTMPIKPNHAVWGALL-GACVSHE 242
M+ + P + Y+ ++D L G+L+ A ++ ++ IK + ++ ++ G C
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC---- 441
Query: 243 NVELGEVAARW 253
+ G+V W
Sbjct: 442 --KAGKVDDGW 450
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 113/243 (46%), Gaps = 9/243 (3%)
Query: 56 PDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHI 115
P FN LL A A + +++ + R G + L +IL++ + + + A +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 116 F-NIIPLK-DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSH 173
++ L + I+ S+++ Y AV+L ++MV+ G +P+ +TFT+++H
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 174 VGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM---PIKPNHAV 230
E ++L M++ P + Y +++ L + G +D A+NL+ M I+ + +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 231 WGALLGACVSHENVE--LGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEK-VRDM 287
+ ++ + + +V+ L T + P N Y L + + GRW D + + DM
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRP-NVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 288 VNE 290
+ +
Sbjct: 247 IEK 249
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 9/210 (4%)
Query: 21 KRTAPWNAVLSGFIHNSLARE-----AIQLFKQMLVEDVQPDNATFNSLLPAYAILADLK 75
+R N V G + N L + A L +M ++ D FN+++ + +
Sbjct: 143 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 202
Query: 76 QAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAII 133
A+N+ + G + S L+ G A + + + K + +++ ++A+I
Sbjct: 203 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 262
Query: 134 AAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHA-CSHVGLVDEGLSLFQFMLKHHI 192
A+ K G A L ++M++ + P+ T+ S+++ C H L D+ +F+FM+
Sbjct: 263 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL-DKAKQMFEFMVSKDC 321
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTM 222
P +D Y +I ++ R++D L R M
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREM 351
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 100/242 (41%), Gaps = 5/242 (2%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
NL KM + +N ++ +A+ LFK+M + ++P+ T++SL+
Sbjct: 171 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 230
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDI 126
A + +I L + L+D + K G A + + + + D DI
Sbjct: 231 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDI 290
Query: 127 IIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQF 186
++++I + H + A +F MV P+ T+ +++ V++G LF+
Sbjct: 291 FTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFRE 350
Query: 187 MLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGACVSHEN 243
M ++ YT +I L G D+A + + M + P+ + LL ++
Sbjct: 351 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 410
Query: 244 VE 245
+E
Sbjct: 411 LE 412
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 2/212 (0%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
KM + + +N +L GF AI+ ++M+ PD T+N++L A
Sbjct: 369 KMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDG 428
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWS 130
++ A+ I L G L + ++D +K G G A + + + KD D I +S
Sbjct: 429 KVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYS 488
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKH 190
+++ + G + A+ F+E + G++PN VTF S++ D + FM+
Sbjct: 489 SLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR 548
Query: 191 HIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM 222
P YT +I+ L G +A L+ +
Sbjct: 549 GCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 102/221 (46%), Gaps = 13/221 (5%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N ++SG+ A+ + +M V PD T+N++L + LKQAM + ++
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDK----DIIIWSAIIAAYGKHGH 141
+ + +IL++ + C G H + + ++D+ D++ ++ ++ K G
Sbjct: 232 QRDCYPDVITYTILIE--ATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 142 GEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTC 201
+ A+ N+M SG +PN +T +L + G + L ML+ P V +
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 202 IIDLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALL-GAC 238
+I+ L R G L A +++ MP +PN + LL G C
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFC 390
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 116/271 (42%), Gaps = 13/271 (4%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N +++G EAI+ M QP+ T N +L + A + ++
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGE 143
R GF + +IL++ + G LG A I +P + + ++ ++ + K +
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
A+ MV G P+ VT+ ++L A G V++ + + + P++ Y +I
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456
Query: 204 DLLGRAGRLDDAYNLI---RTMPIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPE 260
D L +AG+ A L+ R +KP+ + +L+G +S E G+V F E E
Sbjct: 457 DGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGG-LSRE----GKVDEAIKFFHEFE 511
Query: 261 NTG---NYILLANLYAAVGRWRDVEKVRDMV 288
G N + ++ + + R ++ D +
Sbjct: 512 RMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL 542
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 109/222 (49%), Gaps = 7/222 (3%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+ +L +H+ EA+ LF M+ P F LL A + +N+ +L
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK---DKDIIIWSAIIAAYGKHGHG 142
G + L ++L++ + + S Y F +K + DI+ ++++I +
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQ-SSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRM 158
Query: 143 EMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCI 202
E A+S+ N+MV+ G+KP+ V +T+++ + G V+ LSLF M + I P V YT +
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218
Query: 203 IDLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGACVSH 241
++ L +GR DA +L+R M IKP+ + AL+ A V
Sbjct: 219 VNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKE 260
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 102/236 (43%), Gaps = 37/236 (15%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIR 86
N +++ F +S A +M+ +PD TF SL+ + + +++AM++ ++
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 87 SGFLYRLEVASILVDIYSKCGSLGYAHHIFN------IIP-------------------- 120
G + + + ++D K G + YA +F+ I P
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 121 --------LKDK---DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLH 169
K K D+I ++A+I A+ K G A L+NEM++ + PN T+TS+++
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 170 ACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIK 225
G VDE +F M P V YT +I+ + ++DDA + M K
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK 346
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 102/222 (45%), Gaps = 9/222 (4%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+ ++++G ++ R+A L + M ++PD TFN+L+ A+ A ++ +I
Sbjct: 215 YTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI 274
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHGHGE 143
R + + L++ + G + A +F ++ K D++ ++++I + K +
Sbjct: 275 RMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVD 334
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
A+ +F EM Q G+ N +T+T+++ VG + +F M+ + P + Y ++
Sbjct: 335 DAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLL 394
Query: 204 DLLGRAGRLDDAYNLIRTMP------IKPNHAVWGALL-GAC 238
L G++ A + M + PN + LL G C
Sbjct: 395 HCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLC 436
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 113/266 (42%), Gaps = 47/266 (17%)
Query: 19 SKKRTAP----WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADL 74
+K++ P +NA++ F+ +A +L+ +M+ + P+ T+ SL+ + + +
Sbjct: 239 TKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCV 298
Query: 75 KQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAI 132
+A + + G + + L++ + KC + A IF + K + I ++ +
Sbjct: 299 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTL 358
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHH- 191
I +G+ G +A +F+ MV GV PN T+ +LH + G V + L +F+ M K
Sbjct: 359 IQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418
Query: 192 --IIPLVDHYTCII-----------------DLLGR------------------AGRLDD 214
+ P + Y ++ D+ R AG++ +
Sbjct: 419 DGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKN 478
Query: 215 AYNLIRTMP---IKPNHAVWGALLGA 237
A NL ++P +KPN + ++
Sbjct: 479 AVNLFCSLPSKGVKPNVVTYTTMISG 504
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 2 YAKCNCGNLSYKMFMKTSKK----RTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPD 57
+ KC + + K+F + S+K T + ++ GF A ++F M+ V P+
Sbjct: 327 FCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPN 386
Query: 58 NATFNSLLPAYAILADLKQAMNIHCYLIR---SGFLYRLEVASILVDIYSKCGSLGYAHH 114
T+N LL +K+A+ I + + G + ++L+ G L A
Sbjct: 387 IRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALM 446
Query: 115 IFNIIPLKDKDIIIWSAIIAAYG--KHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACS 172
+F + ++ DI I + I G K G + AV+LF + GVKPN VT+T+++
Sbjct: 447 VFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLF 506
Query: 173 HVGLVDEGLSLFQFM 187
GL E LF+ M
Sbjct: 507 REGLKHEAHVLFRKM 521
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 131/283 (46%), Gaps = 11/283 (3%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIR 86
+++L+G+ H+ +A+ L QM+ +PD TF +L+ + +A+ + +++
Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 87 SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGEM 144
G L +V+ K G + A + + + D++I++ II K+ H +
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDD 276
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIID 204
A++LF EM G++P+ T++S++ + G + L M++ I P V ++ +ID
Sbjct: 277 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 336
Query: 205 LLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELGEVAARWTFEL--EP 259
+ G+L +A L M I P+ + +L+ H+ ++ A+ FEL
Sbjct: 337 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD----EAKHMFELMISK 392
Query: 260 ENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLV 302
+ N + + L + + VE+ ++ E+ R L ++
Sbjct: 393 DCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 110/234 (47%), Gaps = 7/234 (2%)
Query: 20 KKRTAPWNAVLSG-FIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAM 78
K T + ++ G F+HN A EA+ L QM+ QPD T+ +++ D+ A+
Sbjct: 185 KPDTFTFTTLIHGLFLHNK-ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 79 NIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAY 136
++ + + + + + ++D K + A ++F + K D+ +S++I+
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 137 GKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLV 196
+G A L ++M++ + PN VTF++++ A G + E L+ M+K I P +
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 197 DHYTCIIDLLGRAGRLDDAYNLIRTMPIK---PNHAVWGALLGACVSHENVELG 247
Y+ +I+ RLD+A ++ M K PN + L+ + VE G
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEG 417
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 112/244 (45%), Gaps = 5/244 (2%)
Query: 9 NLSYKMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAY 68
NL +M K + +++++S + +A +L M+ + P+ TF++L+ A+
Sbjct: 279 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 338
Query: 69 AILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDI 126
L +A ++ +I+ + S L++ + L A H+F ++ KD ++
Sbjct: 339 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 398
Query: 127 IIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQF 186
+ +S +I + K E + LF EM Q G+ N VT+T+++H D +F+
Sbjct: 399 VTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 458
Query: 187 MLKHHIIPLVDHYTCIIDLLGRAGRLDDA---YNLIRTMPIKPNHAVWGALLGACVSHEN 243
M+ + P + Y ++D L + G+L A + ++ ++P+ + ++
Sbjct: 459 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 518
Query: 244 VELG 247
VE G
Sbjct: 519 VEDG 522
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 123/272 (45%), Gaps = 9/272 (3%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
++A++ F+ EA +L+ +M+ + PD T++SL+ + + L +A ++ +I
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHGHGE 143
+ S L+ + K + +F + + + + ++ +I + + +
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 450
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
A +F +MV GV PN +T+ +L G + + + +F+++ + + P + Y +I
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 510
Query: 204 DLLGRAGRLDDAYNLIRTMPIK---PNHAVWGALL-GACVSHENVELGEVAARWTFELEP 259
+ + +AG+++D + L + +K PN + ++ G C E + + +
Sbjct: 511 EGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL 570
Query: 260 ENTGNYILLANLYAAVGRWRDVEKVRDMVNEV 291
N+G Y L A R D E +++ E+
Sbjct: 571 PNSGTY---NTLIRARLRDGDREASAELIKEM 599
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 99/219 (45%), Gaps = 6/219 (2%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N ++ G +A+ LF +M + ++PD T++SL+ A + +I
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGE 143
+ S L+D + K G L A +++ + + D DI +S++I + H +
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
A +F M+ PN VT+++++ V+EG+ LF+ M + ++ YT +I
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 204 DLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALL-GAC 238
+A D+A + + M + PN + LL G C
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 119/260 (45%), Gaps = 17/260 (6%)
Query: 41 EAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILV 100
+A+ LF M+ P FN LL A A + + +++ + G + L SI +
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 101 DIYSKCGSLGYAHHIF-NIIPLK-DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVK 158
+ + + L A + ++ L + DI+ S+++ Y AV+L ++MV+ G K
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 159 PNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNL 218
P+ TFT+++H E ++L M++ P + Y +++ L + G +D A +L
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 219 IRTM---PIKPNHAVWGALLGACVSHENVELGEVAARWTFELEPENTG------NYILLA 269
++ M I+ + ++ ++ +++++ + +T E +N G Y L
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMD--DALNLFT---EMDNKGIRPDVFTYSSLI 300
Query: 270 NLYAAVGRWRDVEK-VRDMV 288
+ GRW D + + DM+
Sbjct: 301 SCLCNYGRWSDASRLLSDMI 320
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 91/213 (42%), Gaps = 36/213 (16%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
++ ++ F S A+ + +M+ +PD T +SLL Y C+
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGY-------------CH-- 165
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDIIIWSAIIAAYGKHGHGEMA 145
R+ A LVD + +GY F ++ +I H A
Sbjct: 166 ----SKRISDAVALVD---QMVEMGYKPDTFT-----------FTTLIHGLFLHNKASEA 207
Query: 146 VSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDL 205
V+L ++MVQ G +P+ VT+ +V++ G +D LSL + M K I V Y IID
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDG 267
Query: 206 LGRAGRLDDAYNLIRTMP---IKPNHAVWGALL 235
L + +DDA NL M I+P+ + +L+
Sbjct: 268 LCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 125/280 (44%), Gaps = 15/280 (5%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIR 86
N VLS + +A+ F+ M V+PD TFN ++ + L QA+++ +
Sbjct: 120 NIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE 179
Query: 87 SGFLYRLEVASI--LVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHG 142
R +V + ++ +YS G + +F + + +I+ ++A++ AY HG
Sbjct: 180 KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMS 239
Query: 143 EMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCI 202
A+S+ ++ Q+G+ P+ V++T +L++ + +F M K P V Y +
Sbjct: 240 GTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNAL 299
Query: 203 IDLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALLGACV-SHENVELGEVAARWTFELE 258
ID G G L +A + R M IKPN LL AC S + V + V +
Sbjct: 300 IDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 359
Query: 259 PENT-------GNYILLANLYAAVGRWRDVEKVRDMVNEV 291
NT G+YI A L A+ ++ + K + + V
Sbjct: 360 NLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSV 399
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 117/272 (43%), Gaps = 48/272 (17%)
Query: 13 KMFMKTSKKRTAP----WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPD----------- 57
++F+ K+R P +NA++ + N EA+++F+QM + ++P+
Sbjct: 279 EVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 338
Query: 58 ------------------------NATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRL 93
A +NS + +Y A+L++A+ ++ + + +
Sbjct: 339 SRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKV--KA 396
Query: 94 EVASILVDIYSKCGSLGYAHHIFNIIPLKDKDII----IWSAIIAAYGKHGHGEMAVSLF 149
+ + + I C Y I + ++D I ++S+++ AY K G A S+F
Sbjct: 397 DSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIF 456
Query: 150 NEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRA 209
N+M +G +P+ + +TS+LHA + + LF M + I P + ++ +
Sbjct: 457 NQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKG 516
Query: 210 GRLDDAY---NLIRTMPIKPNHAVWGALLGAC 238
G+ + + +L+R I AV+ + AC
Sbjct: 517 GQPSNVFVLMDLMREKEIPFTGAVFFEIFSAC 548
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 13/211 (6%)
Query: 41 EAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILV 100
+A LF +M +PD T+++L+ A+ + AMN+ ++R+ + L+
Sbjct: 29 QARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLI 88
Query: 101 DIYSKCGSLGYAHHIFNIIP-LKDK----DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS 155
+ CGS G + + D D++ + +++AY A+S F M +
Sbjct: 89 N---ACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGA 145
Query: 156 GVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML--KHHIIPLVDHYTCIIDLLGRAGRLD 213
V+P+ TF +++ S +G + L LF M + P V +T I+ L G ++
Sbjct: 146 KVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIE 205
Query: 214 DAYNLIRTM---PIKPNHAVWGALLGACVSH 241
+ + M +KPN + AL+GA H
Sbjct: 206 NCRAVFEAMVAEGLKPNIVSYNALMGAYAVH 236
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 125/281 (44%), Gaps = 12/281 (4%)
Query: 23 TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHC 82
TA +N+ + +I+ + +AI L++ M + V+ D+ TF L+ ++ +A++
Sbjct: 363 TAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLK 422
Query: 83 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHG 140
+ EV S ++ YSK G + A IFN + + + D+I +++++ AY
Sbjct: 423 EMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASE 482
Query: 141 HGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYT 200
A LF EM +G++P+ + ++++ A + G L M + I +
Sbjct: 483 KWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFF 542
Query: 201 CIIDLLGRAGRLDDAYNLIRTM-PIKPNHAVWGALLGACVSHENVELGEVAA--RWTFEL 257
I A +LI+ M P P+ ++ L + H + G+V A + +++
Sbjct: 543 EIFSACNTLQEWKRAIDLIQMMDPYLPSLSIG---LTNQMLHLFGKSGKVEAMMKLFYKI 599
Query: 258 EPENTG----NYILLANLYAAVGRWRDVEKVRDMVNEVGLR 294
G Y +L AVG WR +V + ++ G++
Sbjct: 600 IASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQ 640
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 125/280 (44%), Gaps = 15/280 (5%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIR 86
N VLS + +A+ F+ M V+PD TFN ++ + L QA+++ +
Sbjct: 252 NIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE 311
Query: 87 SGFLYRLEVASI--LVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHG 142
R +V + ++ +YS G + +F + + +I+ ++A++ AY HG
Sbjct: 312 KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMS 371
Query: 143 EMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCI 202
A+S+ ++ Q+G+ P+ V++T +L++ + +F M K P V Y +
Sbjct: 372 GTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNAL 431
Query: 203 IDLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALLGACV-SHENVELGEVAARWTFELE 258
ID G G L +A + R M IKPN LL AC S + V + V +
Sbjct: 432 IDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 491
Query: 259 PENT-------GNYILLANLYAAVGRWRDVEKVRDMVNEV 291
NT G+YI A L A+ ++ + K + + V
Sbjct: 492 NLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSV 531
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 120/283 (42%), Gaps = 48/283 (16%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAP----WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPD 57
Y + + ++F+ K+R P +NA++ + N EA+++F+QM + ++P+
Sbjct: 400 YGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPN 459
Query: 58 -----------------------------------NATFNSLLPAYAILADLKQAMNIHC 82
A +NS + +Y A+L++A+ ++
Sbjct: 460 VVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQ 519
Query: 83 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDKDII----IWSAIIAAYGK 138
+ + + + + + I C Y I + ++D I ++S+++ AY K
Sbjct: 520 SMRKKKV--KADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSK 577
Query: 139 HGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDH 198
G A S+FN+M +G +P+ + +TS+LHA + + LF M + I P
Sbjct: 578 QGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIA 637
Query: 199 YTCIIDLLGRAGRLDDAY---NLIRTMPIKPNHAVWGALLGAC 238
+ ++ + G+ + + +L+R I AV+ + AC
Sbjct: 638 CSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSAC 680
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 13/211 (6%)
Query: 41 EAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILV 100
+A LF +M +PD T+++L+ A+ + AMN+ ++R+ + L+
Sbjct: 161 QARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLI 220
Query: 101 DIYSKCGSLGYAHHIFNIIP-LKDK----DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQS 155
+ CGS G + + D D++ + +++AY A+S F M +
Sbjct: 221 N---ACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGA 277
Query: 156 GVKPNQVTFTSVLHACSHVGLVDEGLSLFQFML--KHHIIPLVDHYTCIIDLLGRAGRLD 213
V+P+ TF +++ S +G + L LF M + P V +T I+ L G ++
Sbjct: 278 KVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIE 337
Query: 214 DAYNLIRTM---PIKPNHAVWGALLGACVSH 241
+ + M +KPN + AL+GA H
Sbjct: 338 NCRAVFEAMVAEGLKPNIVSYNALMGAYAVH 368
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 125/281 (44%), Gaps = 12/281 (4%)
Query: 23 TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHC 82
TA +N+ + +I+ + +AI L++ M + V+ D+ TF L+ ++ +A++
Sbjct: 495 TAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLK 554
Query: 83 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHG 140
+ EV S ++ YSK G + A IFN + + + D+I +++++ AY
Sbjct: 555 EMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASE 614
Query: 141 HGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYT 200
A LF EM +G++P+ + ++++ A + G L M + I +
Sbjct: 615 KWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFF 674
Query: 201 CIIDLLGRAGRLDDAYNLIRTM-PIKPNHAVWGALLGACVSHENVELGEVAA--RWTFEL 257
I A +LI+ M P P+ ++ L + H + G+V A + +++
Sbjct: 675 EIFSACNTLQEWKRAIDLIQMMDPYLPSLSIG---LTNQMLHLFGKSGKVEAMMKLFYKI 731
Query: 258 EPENTG----NYILLANLYAAVGRWRDVEKVRDMVNEVGLR 294
G Y +L AVG WR +V + ++ G++
Sbjct: 732 IASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQ 772
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 103/219 (47%), Gaps = 8/219 (3%)
Query: 3 AKCNCG--NLSYKMFMKTSKKRTAP----WNAVLSGFIHNSLAREAIQLFKQMLVEDVQP 56
A C G +L++++ + KR P ++ V+ GF EA+ LF +M +
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL 442
Query: 57 DNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 116
D ++N+LL Y + ++A++I + G + + L+ Y K G +F
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 117 NIIPLKD--KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHV 174
+ + +++ +S +I Y K G + A+ +F E +G++ + V +++++ A
Sbjct: 503 TEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKN 562
Query: 175 GLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLD 213
GLV +SL M K I P V Y IID GR+ +D
Sbjct: 563 GLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMD 601
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 75/139 (53%), Gaps = 10/139 (7%)
Query: 97 SILVDIYSKCGSLGYAHHIFNIIPLKD----KDIIIWSAIIAAYGKHG-HGEMAVSLFNE 151
S L+ Y + G A +FN +K+ +++ ++A+I A GK G + F+E
Sbjct: 272 SALISAYGRSGLHEEAISVFN--SMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 152 MVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGR 211
M ++GV+P+++TF S+L CS GL + +LF M I V Y ++D + + G+
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 212 LDDAYNLIRTMPIK---PN 227
+D A+ ++ MP+K PN
Sbjct: 390 MDLAFEILAQMPVKRIMPN 408
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 131/279 (46%), Gaps = 13/279 (4%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA-DLKQAMNIHCYL 84
++A++S + + L EAI +F M ++P+ T+N+++ A + KQ +
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 85 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHG 142
R+G + L+ + S+ G A ++F+ + + ++D+ ++ ++ A K G
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 143 EMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCI 202
++A + +M + PN V++++V+ + G DE L+LF M I Y +
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTL 450
Query: 203 IDLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELGEVAARWTFELEP 259
+ + + GR ++A +++R M IK + + ALLG + EV +T E++
Sbjct: 451 LSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYD--EVKKVFT-EMKR 507
Query: 260 E----NTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLR 294
E N Y L + Y+ G +++ ++ GLR
Sbjct: 508 EHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLR 546
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 109/246 (44%), Gaps = 13/246 (5%)
Query: 5 CNCGNLSYK----MFMKTSKKRTAP----WNAVLSGFIHNSLAREAIQLFKQMLVEDVQP 56
C G + +K F + + P +N++L+ L A LF +M ++
Sbjct: 313 CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQ 372
Query: 57 DNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF 116
D ++N+LL A + A I + + + S ++D ++K G A ++F
Sbjct: 373 DVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLF 432
Query: 117 NIIPLKD--KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHV 174
+ D + ++ +++ Y K G E A+ + EM G+K + VT+ ++L
Sbjct: 433 GEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQ 492
Query: 175 GLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIR---TMPIKPNHAVW 231
G DE +F M + H++P + Y+ +ID + G +A + R + ++ + ++
Sbjct: 493 GKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLY 552
Query: 232 GALLGA 237
AL+ A
Sbjct: 553 SALIDA 558
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 129/283 (45%), Gaps = 11/283 (3%)
Query: 27 NAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIR 86
N++L+GF H + +A+ L QM+ QPD+ TFN+L+ +A+ + ++
Sbjct: 155 NSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVV 214
Query: 87 SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGEM 144
G L I+V+ K G + A + + + ++I++ II A + +
Sbjct: 215 KGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND 274
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIID 204
A++LF EM G++PN VT+ S++ + G + L M++ I P V ++ +ID
Sbjct: 275 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 334
Query: 205 LLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGACVSHENVELGEVAARWTFEL--EP 259
+ G+L +A L M I P+ + +L+ H+ ++ A+ FEL
Sbjct: 335 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD----EAKHMFELMISK 390
Query: 260 ENTGNYILLANLYAAVGRWRDVEKVRDMVNEVGLRKLPAQSLV 302
+ N + L + + V++ ++ E+ R L ++
Sbjct: 391 DCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 125/269 (46%), Gaps = 7/269 (2%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
++A++ F+ EA +L+ +M+ + PD T++SL+ + + L +A ++ +I
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHGHGE 143
+ + L+ + K + +F + + + + ++ +I + + +
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECD 448
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
A +F +MV GV P+ +T++ +L + G V+ L +F+++ + + P + Y +I
Sbjct: 449 NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMI 508
Query: 204 DLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALLGACVSHENVELGEVAARWTFELEP- 259
+ + +AG+++D ++L ++ +KPN + ++ E + R E P
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL 568
Query: 260 ENTGNYILLANLYAAVG-RWRDVEKVRDM 287
++G Y L + G + E +R+M
Sbjct: 569 PDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 110/243 (45%), Gaps = 11/243 (4%)
Query: 13 KMFMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILA 72
+M +K + + V++G A+ L K+M ++P +N+++ A
Sbjct: 211 RMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYK 270
Query: 73 DLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF-NIIPLK-DKDIIIWS 130
++ A+N+ + G + + L+ G A + ++I K + +++ +S
Sbjct: 271 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 330
Query: 131 AIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHA-CSHVGLVDEGLSLFQFMLK 189
A+I A+ K G A L++EM++ + P+ T++S+++ C H L DE +F+ M+
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL-DEAKHMFELMIS 389
Query: 190 HHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHAVWGALLGACVSHENVELGEV 249
P V Y +I +A R+D+ L R M + L+G V++ + G
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR-------GLVGNTVTYTTLIHGFF 442
Query: 250 AAR 252
AR
Sbjct: 443 QAR 445
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 108/227 (47%), Gaps = 5/227 (2%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N ++ G ++ A EA+ L +M+V+ QPD T+ ++ D+ A+++ +
Sbjct: 189 FNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME 248
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHGHGE 143
+ + + + ++D ++ A ++F + K +++ ++++I +G
Sbjct: 249 QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 308
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
A L ++M++ + PN VTF++++ A G + E L+ M+K I P + Y+ +I
Sbjct: 309 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368
Query: 204 DLLGRAGRLDDAYNLIRTMPIK---PNHAVWGALLGACVSHENVELG 247
+ RLD+A ++ M K PN + L+ + V+ G
Sbjct: 369 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 99/221 (44%), Gaps = 5/221 (2%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
++ +++ F S A+ + +M+ +PD T NSLL + + A+++ ++
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGE 143
G+ + L+ + A + + + +K D++ + ++ K G +
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
+A+SL +M Q ++P V + +++ A + V++ L+LF M I P V Y +I
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 204 DLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGACVSH 241
L GR DA L+ M I PN + AL+ A V
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 94/235 (40%), Gaps = 40/235 (17%)
Query: 41 EAIQLFKQMLVEDVQPDNATFNSLLPAYA------ILADLKQAM-------NIHCYLIRS 87
+A+ LF M+ P F+ LL A A ++ L + M N++ Y I
Sbjct: 64 DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 88 GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD------------------------ 123
R S+ + + +K LGY I + L +
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 124 KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSL 183
D ++ +I +H AV+L + MV G +P+ VT+ V++ G +D LSL
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 184 FQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP---IKPNHAVWGALL 235
+ M + I P V Y IID L ++DA NL M I+PN + +L+
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 102/224 (45%), Gaps = 5/224 (2%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N +++G + +A+++ +M + V + T+ ++ YA + D +A L
Sbjct: 627 FNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQ 686
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHGHGE 143
G + L+ K G + A + + ++ ++ +++ +I + + G
Sbjct: 687 NEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVW 746
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
A L +M + GVKP+ T+TS + ACS G ++ + M + P + YT +I
Sbjct: 747 EAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLI 806
Query: 204 DLLGRAGRLDDA---YNLIRTMPIKPNHAVWGALLGACVSHENV 244
RA + A Y ++ M IKP+ AV+ LL + +S ++
Sbjct: 807 KGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASI 850
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 95/210 (45%), Gaps = 2/210 (0%)
Query: 15 FMKTSKKRTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADL 74
F K SK + ++ + A + F++M + P + + SL+ AYA+ D+
Sbjct: 301 FEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDM 360
Query: 75 KQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPL--KDKDIIIWSAI 132
+A++ + G L S++V +SK G A + F+ K + I+ I
Sbjct: 361 DEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKI 420
Query: 133 IAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHI 192
I A+ + + E A +L EM + G+ + +++ + V +GL +F+ + +
Sbjct: 421 IYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGF 480
Query: 193 IPLVDHYTCIIDLLGRAGRLDDAYNLIRTM 222
P V Y C+I+L + G++ A + R M
Sbjct: 481 TPTVVTYGCLINLYTKVGKISKALEVSRVM 510
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 107/241 (44%), Gaps = 6/241 (2%)
Query: 42 AIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVD 101
A L ++M E + A +++++ Y ++AD K+ + + L GF + L++
Sbjct: 433 AEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLIN 492
Query: 102 IYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKP 159
+Y+K G + A + ++ + ++ +S +I + K A ++F +MV+ G+KP
Sbjct: 493 LYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKP 552
Query: 160 NQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAG---RLDDAY 216
+ + + +++ A +G +D + + M K P + II ++G R + +
Sbjct: 553 DVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVF 612
Query: 217 NLIRTMPIKPNHAVWGALLGACVSHENVELG-EVAARWTFELEPENTGNYILLANLYAAV 275
+++R P + L+ V +E E+ T N Y + YA+V
Sbjct: 613 DMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASV 672
Query: 276 G 276
G
Sbjct: 673 G 673
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/206 (16%), Positives = 92/206 (44%), Gaps = 10/206 (4%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
++ +++GF+ A +F+ M+ E ++PD +N+++ A+ + ++ +A+ +
Sbjct: 522 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ 581
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI------IPLKDKDIIIWSAIIAAYGKH 139
+ ++ Y+K G + + +F++ +P + ++ +I +
Sbjct: 582 KLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPT----VHTFNGLINGLVEK 637
Query: 140 GHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHY 199
E AV + +EM +GV N+ T+T ++ + VG + F + + + Y
Sbjct: 638 RQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTY 697
Query: 200 TCIIDLLGRAGRLDDAYNLIRTMPIK 225
++ ++GR+ A + + M +
Sbjct: 698 EALLKACCKSGRMQSALAVTKEMSAR 723
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 116/252 (46%), Gaps = 12/252 (4%)
Query: 3 AKCNCGNLSYKMFMKTSKKRTA-PWNAVLSGFIHNSLAREAIQLFKQMLVED---VQPDN 58
KCN ++ + + +A + +L F+ +EA ++F+ +L E ++PD
Sbjct: 188 GKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQ 247
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
++ ++ Y + ++A + ++ G + L+ + S I++
Sbjct: 248 KMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFET---SYKEVSKIYDQ 304
Query: 119 IPLKD--KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGL 176
+ D D++ ++ +I AYG+ E A+S+F EM+ +GV+P + +L A + G+
Sbjct: 305 MQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGM 364
Query: 177 VDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPI---KPNHAVWGA 233
V++ ++F+ M + I P + YT ++ A ++ A + + + +PN +G
Sbjct: 365 VEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGT 424
Query: 234 LLGACVSHENVE 245
L+ +VE
Sbjct: 425 LIKGYAKANDVE 436
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 78/180 (43%), Gaps = 2/180 (1%)
Query: 41 EAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILV 100
EA+ +F++ML V+P + +N LL A+AI ++QA + + R L + ++
Sbjct: 332 EALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTML 391
Query: 101 DIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVK 158
Y + A F I + + +I+ + +I Y K E + ++ +M SG+K
Sbjct: 392 SAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIK 451
Query: 159 PNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNL 218
NQ T+++ A L ++ M + P ++ L L++A L
Sbjct: 452 ANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 116/252 (46%), Gaps = 12/252 (4%)
Query: 3 AKCNCGNLSYKMFMKTSKKRTA-PWNAVLSGFIHNSLAREAIQLFKQMLVED---VQPDN 58
KCN ++ + + +A + +L F+ +EA ++F+ +L E ++PD
Sbjct: 195 GKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQ 254
Query: 59 ATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNI 118
++ ++ Y + ++A + ++ G + L+ + S I++
Sbjct: 255 KMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFET---SYKEVSKIYDQ 311
Query: 119 IPLKD--KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGL 176
+ D D++ ++ +I AYG+ E A+S+F EM+ +GV+P + +L A + G+
Sbjct: 312 MQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGM 371
Query: 177 VDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMPI---KPNHAVWGA 233
V++ ++F+ M + I P + YT ++ A ++ A + + + +PN +G
Sbjct: 372 VEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGT 431
Query: 234 LLGACVSHENVE 245
L+ +VE
Sbjct: 432 LIKGYAKANDVE 443
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 78/180 (43%), Gaps = 2/180 (1%)
Query: 41 EAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILV 100
EA+ +F++ML V+P + +N LL A+AI ++QA + + R L + ++
Sbjct: 339 EALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTML 398
Query: 101 DIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVK 158
Y + A F I + + +I+ + +I Y K E + ++ +M SG+K
Sbjct: 399 SAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIK 458
Query: 159 PNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNL 218
NQ T+++ A L ++ M + P ++ L L++A L
Sbjct: 459 ANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 11/207 (5%)
Query: 40 REAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASIL 99
R+ + + +M + ++ D T +++L A A L++A L G+ + L
Sbjct: 263 RKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNAL 322
Query: 100 VDIYSKCGSLGYAHHIF-----NIIPLKDKDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQ 154
+ ++ K G A + N P D + ++ ++AAY + G + A + M +
Sbjct: 323 LQVFGKAGVYTEALSVLKEMEENSCP---ADSVTYNELVAAYVRAGFSKEAAGVIEMMTK 379
Query: 155 SGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDD 214
GV PN +T+T+V+ A G DE L LF M + +P Y ++ LLG+ R ++
Sbjct: 380 KGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNE 439
Query: 215 AYNLIRTMP---IKPNHAVWGALLGAC 238
++ M PN A W +L C
Sbjct: 440 MIKMLCDMKSNGCSPNRATWNTMLALC 466
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 118/279 (42%), Gaps = 16/279 (5%)
Query: 23 TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHC 82
T +NA+L F + EA+ + K+M D+ T+N L+ AY K+A +
Sbjct: 316 TVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIE 375
Query: 83 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF------NIIPLKDKDIIIWSAIIAAY 136
+ + G + + ++D Y K G A +F +P + ++A+++
Sbjct: 376 MMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP----NTCTYNAVLSLL 431
Query: 137 GKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLV 196
GK + + +M +G PN+ T+ ++L C + G+ +F+ M P
Sbjct: 432 GKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDR 491
Query: 197 DHYTCIIDLLGRAGRLDDAYNLIRTMPIKPNHA---VWGALLGACVSHENVELGE--VAA 251
D + +I GR G DA + M +A + ALL A + GE ++
Sbjct: 492 DTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISD 551
Query: 252 RWTFELEPENTGNYILLANLYAAVGRWRDVEKVRDMVNE 290
+ +P T +Y L+ YA G + +E++ + + E
Sbjct: 552 MKSKGFKPTET-SYSLMLQCYAKGGNYLGIERIENRIKE 589
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 87/195 (44%), Gaps = 7/195 (3%)
Query: 29 VLSGFIHNSLA--REAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIR 86
+L+ F +LA A LFK+ +PD FNS+L + QA I +
Sbjct: 603 LLANFKCRALAGSERAFTLFKK---HGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIRE 659
Query: 87 SGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHGHGEM 144
G L + L+D+Y + G A I + D++ ++ +I + + G +
Sbjct: 660 DGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQE 719
Query: 145 AVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIID 204
AV + +EM + G++P T+ + + + +G+ E + + M K+ P + ++D
Sbjct: 720 AVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVD 779
Query: 205 LLGRAGRLDDAYNLI 219
RAG+ +A + +
Sbjct: 780 GYCRAGKYSEAMDFV 794
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 119/276 (43%), Gaps = 45/276 (16%)
Query: 9 NLSYKMFMKTSKK-----RTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNS 63
+L+Y+M + K T +NA++SGF +A L M +PD T+N
Sbjct: 201 DLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNV 260
Query: 64 LLPAYAILADLKQAMNIHCYLIRSGF----------------------LYRLEVA----- 96
LL Y LK+A + ++RSG Y V
Sbjct: 261 LLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPR 320
Query: 97 --------SILVDIYSKCGSLGYAHHIFNIIPLKDK--DIIIWSAIIAAYGKHGHGEMAV 146
S L++ + + + A+ +F + K +++ ++++I A+ + G+ +A
Sbjct: 321 GFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAK 380
Query: 147 SLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLL 206
L ++M + G+ P+++ +T++L G VD+ +F M++H I P Y +I L
Sbjct: 381 KLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGL 440
Query: 207 GRAGRLDDAYNLIRTMPIK---PNHAVWGALLGACV 239
R+GR+ +A L M K P+ + ++G +
Sbjct: 441 CRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLI 476
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 134/327 (40%), Gaps = 57/327 (17%)
Query: 9 NLSYKMFMKTSKKRTAP----WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSL 64
N + +++ + + K AP + +LSG L R+A++LF +M +V+P+ T+N +
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 65 LPAYAILADLKQAMNIHCYLIRSGFL-----YRLEV-----------ASILVDI------ 102
+ Y D+ +A + G + YR + A + VD
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608
Query: 103 -------------YSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGEMAVS 147
+ + G L A + + + D D++ + +I KH ++
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFG 668
Query: 148 LFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLG 207
L EM G+KP+ V +TS++ A S G E ++ M+ +P YT +I+ L
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728
Query: 208 RAGRLDDAYNLIRTM-PIK--PNHAVWGALLGACVSHENVELGEVAARWTFELEP----- 259
+AG +++A L M P+ PN +G L + + GEV + EL
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFL------DILTKGEVDMQKAVELHNAILKG 782
Query: 260 --ENTGNYILLANLYAAVGRWRDVEKV 284
NT Y +L + GR + ++
Sbjct: 783 LLANTATYNMLIRGFCRQGRIEEASEL 809
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 105/226 (46%), Gaps = 6/226 (2%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+NA++ EA LF +M ++P++ T++ L+ + L A++ ++
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIF-NIIPLK-DKDIIIWSAIIAAYGKHGHGE 143
+G + + L++ + K G + A +I K + ++ +++++ Y G
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 144 MAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCII 203
A+ L++EM G+ P+ TFT++L GL+ + + LF M + ++ P Y +I
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Query: 204 DLLGRAGRLDDAYNLIRTMPIK---PNHAVWGALL-GACVSHENVE 245
+ G + A+ ++ M K P+ + L+ G C++ + E
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASE 595
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 78/172 (45%), Gaps = 4/172 (2%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAI-LADLKQAMNIHCYL 84
+ AV++G EA L +M P+ T+ L D+++A+ +H +
Sbjct: 720 YTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI 779
Query: 85 IRSGFLYRLEVASILVDIYSKCGSLGYAHHIFN--IIPLKDKDIIIWSAIIAAYGKHGHG 142
++ G L ++L+ + + G + A + I D I ++ +I +
Sbjct: 780 LK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDV 838
Query: 143 EMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIP 194
+ A+ L+N M + G++P++V + +++H C G + + L ML+ +IP
Sbjct: 839 KKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIP 890
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 107/237 (45%), Gaps = 11/237 (4%)
Query: 8 GNLSYKMFMKTSKKRTAPWNAVLSGFIHNSLARE----AIQLFKQMLVEDVQPDNATFNS 63
G L +KM + +K P LS +H + A++LF M+ ++PD +
Sbjct: 175 GVLVFKMMI--TKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTG 232
Query: 64 LLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD 123
++ + L DL +A + ++ +G + ++L+D K + A I + KD
Sbjct: 233 VIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKD 292
Query: 124 --KDIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGL 181
D++ + ++ K E+ + + +EM+ P++ +S++ G ++E L
Sbjct: 293 LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEAL 352
Query: 182 SLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDA---YNLIRTMPIKPNHAVWGALL 235
+L + ++ + P + Y +ID L + + +A ++ + + ++PN + L+
Sbjct: 353 NLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILI 409
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 117/280 (41%), Gaps = 34/280 (12%)
Query: 25 PWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYL 84
P+N ++ G EA+ + K + +D++PD T+ +L+ + + + + + +
Sbjct: 264 PYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEM 323
Query: 85 IRSGFLYRLEVASILVDIYSKCGSLGYAHHI------FNIIPLKDKDIIIWSAIIAAYGK 138
+ F S LV+ K G + A ++ F + P ++ +++A+I + K
Sbjct: 324 LCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSP----NLFVYNALIDSLCK 379
Query: 139 HGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDH 198
A LF+ M + G++PN VT++ ++ G +D LS M+ + V
Sbjct: 380 GRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYP 439
Query: 199 YTCIIDLLGRAGRLDDAYNLIRTM---PIKPNHAVWGALLGACVS-----------HENV 244
Y +I+ + G + A + M ++P + +L+G S HE
Sbjct: 440 YNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMT 499
Query: 245 ELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKV 284
G + +TF LL+ L+ A G RD K+
Sbjct: 500 GKGIAPSIYTFT---------TLLSGLFRA-GLIRDAVKL 529
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 107/221 (48%), Gaps = 11/221 (4%)
Query: 24 APWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCY 83
A +N +L + + E +L+K+M + + + T N ++ ++ A++++
Sbjct: 821 ATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYD 880
Query: 84 LIRS-GFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD----KDIIIWSAIIAAYGK 138
L+ F L+D SK G L A +F + D + I++ +I +GK
Sbjct: 881 LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFE--GMLDYGCRPNCAIYNILINGFGK 938
Query: 139 HGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDH 198
G + A +LF MV+ GV+P+ T++ ++ VG VDEGL F+ + + + P V
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVC 998
Query: 199 YTCIIDLLGRAGRLDDAYNLIRTMP----IKPNHAVWGALL 235
Y II+ LG++ RL++A L M I P+ + +L+
Sbjct: 999 YNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLI 1039
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 110/252 (43%), Gaps = 8/252 (3%)
Query: 2 YAKCNCGNLSYKMFMKTSKKRTAP----WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPD 57
Y K + + F K K AP NA L REA Q+F + + PD
Sbjct: 443 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 502
Query: 58 NATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIF- 116
+ T+N ++ Y+ + ++ +A+ + ++ +G + V + L++ K + A +F
Sbjct: 503 SVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFM 562
Query: 117 NIIPLKDK-DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVG 175
+ +K K ++ ++ ++A GK+G + A+ LF MVQ G PN +TF ++
Sbjct: 563 RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKND 622
Query: 176 LVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTMP--IKPNHAVWGA 233
V L + M+ +P V Y II L + G++ +A M + P+
Sbjct: 623 EVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCT 682
Query: 234 LLGACVSHENVE 245
LL V +E
Sbjct: 683 LLPGVVKASLIE 694
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 97/228 (42%), Gaps = 9/228 (3%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
+N ++ G + +A++LF M V+P T+ + Y D A+ +
Sbjct: 401 YNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMK 460
Query: 86 RSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD----KDIIIWSAIIAAYGKHGH 141
G + + + +K G A IF LKD D + ++ ++ Y K G
Sbjct: 461 TKGIAPNIVACNASLYSLAKAGRDREAKQIF--YGLKDIGLVPDSVTYNMMMKCYSKVGE 518
Query: 142 GEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTC 201
+ A+ L +EM+++G +P+ + S+++ VDE +F M + + P V Y
Sbjct: 519 IDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578
Query: 202 IIDLLGRAGRLDDAYNLIRTMPIK---PNHAVWGALLGACVSHENVEL 246
++ LG+ G++ +A L M K PN + L ++ V L
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTL 626
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 87/179 (48%), Gaps = 3/179 (1%)
Query: 24 APWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCY 83
A +N +++GF A A LFK+M+ E V+PD T++ L+ ++ + + ++
Sbjct: 927 AIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKE 986
Query: 84 LIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLK---DKDIIIWSAIIAAYGKHG 140
L SG + +++++ K L A +FN + D+ ++++I G G
Sbjct: 987 LKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAG 1046
Query: 141 HGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHY 199
E A ++NE+ ++G++PN TF +++ S G + +++Q M+ P Y
Sbjct: 1047 MVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 113/280 (40%), Gaps = 12/280 (4%)
Query: 23 TAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHC 82
T N +L + E +F M ++ D T+ ++ + ++ LKQA
Sbjct: 118 TETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALR 177
Query: 83 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKD--KDIIIWSAIIAAYGKHG 140
+ GF+ + L+ + K A ++ + L+ + +S+++ GK
Sbjct: 178 KMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRR 237
Query: 141 HGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYT 200
+ + L EM G+KPN TFT + G ++E + + M P V YT
Sbjct: 238 DIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYT 297
Query: 201 CIIDLLGRAGRLDDAYNLIRTMPI---KPNHAVWGALLGACVSHENVELGEVAARWTFEL 257
+ID L A +LD A + M KP+ + LL +N +L V W+ E+
Sbjct: 298 VLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDR--FSDNRDLDSVKQFWS-EM 354
Query: 258 EPE----NTGNYILLANLYAAVGRWRDVEKVRDMVNEVGL 293
E + + + +L + G + + D++ + G+
Sbjct: 355 EKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGI 394
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 10/209 (4%)
Query: 35 HNSL--AREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLIRSGFLYR 92
HN++ AR + F + L VQP T+N L+ ++ A ++ + +G +
Sbjct: 762 HNNVSGARTLFEKFTKDL--GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819
Query: 93 LEVASILVDIYSKCGSLGYAHHIFNIIPLK--DKDIIIWSAIIAAYGKHGHGEMAVSLFN 150
+ + L+D Y K G + ++ + + + I + +I+ K G+ + A+ L+
Sbjct: 820 VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYY 879
Query: 151 E-MVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIPLVDHYTCIIDLLGRA 209
+ M P T+ ++ S G + E LF+ ML + P Y +I+ G+A
Sbjct: 880 DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKA 939
Query: 210 GRLDDAYNLIRTM---PIKPNHAVWGALL 235
G D A L + M ++P+ + L+
Sbjct: 940 GEADAACALFKRMVKEGVRPDLKTYSVLV 968
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 102/218 (46%), Gaps = 5/218 (2%)
Query: 9 NLSYKMFMKTSKK-RTAPWNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPA 67
++ +K + S++ + A+L GF + EA +L M +E +P+ +++L+
Sbjct: 624 DMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDG 683
Query: 68 YAILADLKQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHHIFNIIPLKDK--- 124
+ L +A + + GF L S L+D Y K A + + + L++
Sbjct: 684 LCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM-LENSCAP 742
Query: 125 DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLF 184
+++I++ +I K G + A L M + G +PN VT+T+++ +G ++ L L
Sbjct: 743 NVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELL 802
Query: 185 QFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM 222
+ M + P Y +ID + G LD A+NL+ M
Sbjct: 803 ERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 20/189 (10%)
Query: 125 DIIIWSAIIAAYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLF 184
D+ ++ ++ ++ K G E A FNEM + G PN VT+T+++HA V LF
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576
Query: 185 QFMLKHHIIPLVDHYTCIIDLLGRAGRLDDAYNLIRTM-------------------PIK 225
+ ML +P + Y+ +ID +AG+++ A + M +
Sbjct: 577 ETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER 636
Query: 226 PNHAVWGALL-GACVSHENVELGEVAARWTFELEPENTGNYILLANLYAAVGRWRDVEKV 284
PN +GALL G C SH E ++ + E N Y L + VG+ + ++V
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 285 RDMVNEVGL 293
+ ++E G
Sbjct: 697 KTEMSEHGF 705
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 105/233 (45%), Gaps = 17/233 (7%)
Query: 26 WNAVLSGFIHNSLAREAIQLFKQMLVEDVQPDNATFNSLLPAYAILADLKQAMNIHCYLI 85
++ +L G ++ ++ M++E P FNSL+ AY D A + ++
Sbjct: 340 YSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMV 399
Query: 86 RSGFL-----YRLEVASILVDIYS-KCGSLGYAHHIFNI-----IPLKDKDIIIWSAIIA 134
+ G + Y + + SI D S C L A ++ + L ++ ++ +
Sbjct: 400 KCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLC 459
Query: 135 AYGKHGHGEMAVSLFNEMVQSGVKPNQVTFTSVLHACSHVGLVDEGLSLFQFMLKHHIIP 194
+ GK+ E A S+ EM+ G P+ T++ VL+ + ++ LF+ M + ++
Sbjct: 460 SAGKY---EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVA 516
Query: 195 LVDHYTCIIDLLGRAGRLDDA---YNLIRTMPIKPNHAVWGALLGACVSHENV 244
V YT ++D +AG ++ A +N +R + PN + AL+ A + + V
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKV 569