Miyakogusa Predicted Gene

Lj5g3v2241270.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2241270.2 Non Chatacterized Hit- tr|D8RHS1|D8RHS1_SELML
Putative uncharacterized protein OS=Selaginella
moelle,28.24,0.00000000000001,coiled-coil,NULL; seg,NULL,CUFF.57023.2
         (369 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G09290.1 | Symbols:  | unknown protein; Has 73 Blast hits to ...   317   9e-87

>AT1G09290.1 | Symbols:  | unknown protein; Has 73 Blast hits to 71
           proteins in 26 species: Archae - 0; Bacteria - 0;
           Metazoa - 5; Fungi - 11; Plants - 54; Viruses - 0; Other
           Eukaryotes - 3 (source: NCBI BLink). |
           chr1:3001682-3003715 REVERSE LENGTH=348
          Length = 348

 Score =  317 bits (812), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 165/326 (50%), Positives = 222/326 (68%), Gaps = 11/326 (3%)

Query: 42  KNGDEKAMMTPWEQHSGVIKLSRYDYNAPASLLLHSHSGFLITCTIKREKSATKEALSIL 101
           + G+E   +TPWEQHS +I + R+DY AP+SLL HSHSGFL+TC IKREKSATKE +SIL
Sbjct: 24  ERGEEAETLTPWEQHSSIISIPRFDYKAPSSLLHHSHSGFLVTCNIKREKSATKEVMSIL 83

Query: 102 EKFVGAFNAGGFECSKNPGEYSSFKRMRVDTQDI--GGECLDVKETESVTDNSGDGKVLS 159
            K++G+ +    E   +    ++ K+ +V  Q+   GGE     E +++ + +G+   + 
Sbjct: 84  GKYIGSMHEEKPEVLNS----TASKKQKVCAQETEEGGEKTVPLENDALQE-TGENPNVE 138

Query: 160 PAKAEAEDKDGVTDLSLVKLTRNGLLLFIYPNNMFPDTVNIVSNIIQSLESGSTSLPVWC 219
             K   E+ + +  +SLVKLT++GLLLF +P    P+T NIVS + QS+ESG+   P+WC
Sbjct: 139 DLKLANEEHNSL--MSLVKLTKSGLLLFTFPVENSPNTTNIVSRVFQSMESGALKAPIWC 196

Query: 220 HRIFPIQATCRLNEKELQEVVSMLVKKFLASKQGKLERPLKFAVGYNRRGIEDT--KFAK 277
           HRIFP+QATC L EKEL+E VS LV++F+  K   L +P+KFA GY RRG E+T  K  K
Sbjct: 197 HRIFPVQATCGLTEKELRETVSKLVQRFVNDKDNTLSKPVKFAAGYQRRGAEETKGKIRK 256

Query: 278 ENSNGSNAFSLLDRNKCFSVVASAVNDVVEDSVVDLRSPELSILVELLPLSRVPNGSLVV 337
           + S+      LLDR KCF  VA+ V D+V DSVVDL+SPEL +LVELLPLSR+ +GS V 
Sbjct: 257 DASDVLVQCPLLDRIKCFETVAAGVKDIVPDSVVDLKSPELCVLVELLPLSRISSGSFVA 316

Query: 338 AVSALPRNLVSTKPRLCVKALTSNTK 363
           AVS LP  LVSTKP+LC+K L   +K
Sbjct: 317 AVSVLPHRLVSTKPKLCIKPLVPESK 342