Miyakogusa Predicted Gene
- Lj5g3v2241170.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2241170.2 tr|Q6ZLH4|Q6ZLH4_ORYSJ Os07g0590600 protein
OS=Oryza sativa subsp. japonica GN=OJ1174_G05.19 PE=4
SV,29.41,4e-19,PPR: pentatricopeptide repeat domain,Pentatricopeptide
repeat; PPR_2,Pentatricopeptide repeat; PPR,P,CUFF.57053.2
(217 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 343 5e-95
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 343 7e-95
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 6e-27
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 5e-24
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 7e-24
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 6e-23
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 103 1e-22
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 102 1e-22
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 102 2e-22
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 2e-22
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 102 2e-22
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 101 4e-22
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 100 8e-22
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 2e-21
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 2e-21
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 2e-21
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 2e-21
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 2e-21
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 98 5e-21
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 6e-21
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 1e-20
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 1e-20
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 1e-20
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 96 2e-20
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 96 2e-20
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 3e-20
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 3e-20
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 3e-20
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 95 4e-20
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 5e-20
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 5e-20
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 5e-20
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 5e-20
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 6e-20
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 6e-20
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 6e-20
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 6e-20
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 1e-19
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 93 2e-19
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 3e-19
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 4e-19
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 4e-19
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 91 6e-19
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 1e-18
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 1e-18
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 1e-18
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 2e-18
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 2e-18
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 2e-18
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 3e-18
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 3e-18
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 4e-18
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 4e-18
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 5e-18
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 6e-18
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 7e-18
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 87 7e-18
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 7e-18
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 1e-17
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 1e-17
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 1e-17
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 86 1e-17
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-17
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 2e-17
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 86 2e-17
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 2e-17
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 2e-17
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 3e-17
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 3e-17
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 3e-17
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 5e-17
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 6e-17
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 7e-17
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 7e-17
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 1e-16
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 1e-16
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 1e-16
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 1e-16
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 1e-16
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 83 2e-16
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 2e-16
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-16
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 3e-16
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 4e-16
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 4e-16
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 4e-16
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 5e-16
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 5e-16
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 5e-16
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 6e-16
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 80 8e-16
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 8e-16
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 9e-16
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 9e-16
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 9e-16
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 9e-16
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 9e-16
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 80 1e-15
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 1e-15
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 1e-15
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 80 1e-15
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 1e-15
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-15
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 2e-15
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 2e-15
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-15
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-15
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-15
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 3e-15
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 3e-15
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 3e-15
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 3e-15
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 3e-15
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 3e-15
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 3e-15
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 4e-15
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 4e-15
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 78 5e-15
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 5e-15
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 5e-15
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 6e-15
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 6e-15
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 77 7e-15
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 8e-15
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 8e-15
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 1e-14
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 76 1e-14
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 2e-14
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 2e-14
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 2e-14
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-14
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 3e-14
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 5e-14
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 6e-14
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 6e-14
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 7e-14
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 7e-14
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 8e-14
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 1e-13
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 1e-13
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 1e-13
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 73 2e-13
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-13
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 3e-13
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 72 3e-13
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 3e-13
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 3e-13
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 72 3e-13
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 3e-13
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 4e-13
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 4e-13
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 4e-13
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 5e-13
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 5e-13
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 6e-13
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 6e-13
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 6e-13
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 7e-13
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 8e-13
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 8e-13
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 9e-13
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 9e-13
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 1e-12
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 1e-12
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 70 1e-12
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 1e-12
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-12
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-12
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 69 3e-12
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 69 3e-12
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 3e-12
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 3e-12
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 4e-12
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 4e-12
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 68 5e-12
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 5e-12
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 6e-12
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 6e-12
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 6e-12
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 6e-12
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 6e-12
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 7e-12
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 67 1e-11
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-11
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 66 1e-11
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 2e-11
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 66 2e-11
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 2e-11
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 2e-11
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 65 3e-11
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 4e-11
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 4e-11
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 4e-11
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 4e-11
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 4e-11
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 5e-11
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 5e-11
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 5e-11
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-11
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-11
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 6e-11
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 6e-11
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 7e-11
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 8e-11
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 8e-11
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 8e-11
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 8e-11
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 8e-11
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 9e-11
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 1e-10
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 1e-10
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 1e-10
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 1e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 63 1e-10
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 1e-10
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 63 2e-10
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 2e-10
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 63 2e-10
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-10
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 2e-10
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 3e-10
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 3e-10
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 5e-10
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 5e-10
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 5e-10
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 61 5e-10
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 5e-10
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 5e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 5e-10
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 61 5e-10
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 6e-10
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 61 6e-10
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 6e-10
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 7e-10
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 7e-10
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 61 7e-10
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 8e-10
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 8e-10
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 9e-10
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 60 9e-10
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 60 1e-09
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 59 2e-09
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 2e-09
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-09
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-09
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-09
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-09
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-09
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 4e-09
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 5e-09
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 5e-09
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 5e-09
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 5e-09
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 58 6e-09
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 6e-09
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 6e-09
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 8e-09
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 8e-09
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 9e-09
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 57 1e-08
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 56 1e-08
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 2e-08
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 2e-08
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 2e-08
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 56 2e-08
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 56 2e-08
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 56 2e-08
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-08
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-08
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 3e-08
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 55 3e-08
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 3e-08
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 3e-08
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 55 3e-08
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 4e-08
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 4e-08
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 55 4e-08
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 55 4e-08
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 6e-08
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 6e-08
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 6e-08
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 7e-08
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 9e-08
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 9e-08
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 1e-07
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-07
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-07
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-07
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-07
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 53 2e-07
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 2e-07
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-07
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 52 2e-07
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 3e-07
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 52 4e-07
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 4e-07
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 52 4e-07
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 5e-07
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 5e-07
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 5e-07
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 5e-07
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 6e-07
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 6e-07
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 51 6e-07
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 6e-07
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 6e-07
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 6e-07
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 7e-07
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 7e-07
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 7e-07
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 8e-07
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 9e-07
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 9e-07
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 9e-07
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 9e-07
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT2G48000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 2e-06
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 50 2e-06
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 2e-06
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 49 3e-06
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 4e-06
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 4e-06
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 4e-06
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 4e-06
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 5e-06
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 5e-06
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 48 6e-06
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 47 7e-06
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 47 7e-06
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 47 7e-06
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 47 8e-06
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 8e-06
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 47 1e-05
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 343 bits (880), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 158/215 (73%), Positives = 189/215 (87%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQHMGCEPDRASYNI+VDAYGRAG +DAEAVFE+MKR+GI PTMKSHM+LLSA+SK +
Sbjct: 360 MQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARD 419
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V+KCE I+ +M ++G++ DTFVLNSMLNLYGRLGQF KME++L MENG C ADISTYNI
Sbjct: 420 VTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNI 479
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN YG+AGF++++E LF L K +PDVVTWTSRIGAYS+KKLYV+CLE+FEEMIDSG
Sbjct: 480 LINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 539
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKDI 215
C PDGGTAKVLL+ACS+E+Q EQVT+V+RTM K +
Sbjct: 540 CAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGV 574
Score = 110 bits (275), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 104/184 (56%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ C+P +YN++++ YG+A + ++ +M+ P + ++ L++AF++ G
Sbjct: 255 MKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGL 314
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
K E+I Q+ + GL+ D +V N+++ Y R G E+ ++M++ CE D ++YNI
Sbjct: 315 CEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNI 374
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+++ YG+AG E +F+ + G+ P + + + AYSK + +C I +EM ++G
Sbjct: 375 MVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENG 434
Query: 181 CYPD 184
PD
Sbjct: 435 VEPD 438
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 4/191 (2%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMV----LLSAFSKTGNVSK 63
P +Y +L+ AY AG + AE V +M+ ++P V + + GN +
Sbjct: 188 PTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEE 247
Query: 64 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN 123
D+ +M + K T N M+NLYG+ + ++ M + C+ +I TY L+N
Sbjct: 248 AIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVN 307
Query: 124 RYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYP 183
+ + G +K E +F+ L GL+PDV + + + +YS+ EIF M GC P
Sbjct: 308 AFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP 367
Query: 184 DGGTAKVLLAA 194
D + +++ A
Sbjct: 368 DRASYNIMVDA 378
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 343 bits (879), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 158/215 (73%), Positives = 189/215 (87%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQHMGCEPDRASYNI+VDAYGRAG +DAEAVFE+MKR+GI PTMKSHM+LLSA+SK +
Sbjct: 382 MQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARD 441
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V+KCE I+ +M ++G++ DTFVLNSMLNLYGRLGQF KME++L MENG C ADISTYNI
Sbjct: 442 VTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNI 501
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN YG+AGF++++E LF L K +PDVVTWTSRIGAYS+KKLYV+CLE+FEEMIDSG
Sbjct: 502 LINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 561
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKDI 215
C PDGGTAKVLL+ACS+E+Q EQVT+V+RTM K +
Sbjct: 562 CAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGV 596
Score = 110 bits (274), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 104/184 (56%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ C+P +YN++++ YG+A + ++ +M+ P + ++ L++AF++ G
Sbjct: 277 MKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGL 336
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
K E+I Q+ + GL+ D +V N+++ Y R G E+ ++M++ CE D ++YNI
Sbjct: 337 CEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNI 396
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+++ YG+AG E +F+ + G+ P + + + AYSK + +C I +EM ++G
Sbjct: 397 MVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENG 456
Query: 181 CYPD 184
PD
Sbjct: 457 VEPD 460
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 4/191 (2%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMV----LLSAFSKTGNVSK 63
P +Y +L+ AY AG + AE V +M+ ++P V + + GN +
Sbjct: 210 PTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEE 269
Query: 64 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN 123
D+ +M + K T N M+NLYG+ + ++ M + C+ +I TY L+N
Sbjct: 270 AIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVN 329
Query: 124 RYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYP 183
+ + G +K E +F+ L GL+PDV + + + +YS+ EIF M GC P
Sbjct: 330 AFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP 389
Query: 184 DGGTAKVLLAA 194
D + +++ A
Sbjct: 390 DRASYNIMVDA 400
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 117 bits (293), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 109/211 (51%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G D+ +YN L+D YG++ +A V +M G +P++ ++ L+SA+++ G
Sbjct: 305 MKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGM 364
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + ++ NQM + G K D F ++L+ + R G+ + M N C+ +I T+N
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNA 424
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
I YG G +M +F ++ GL PD+VTW + + + + + +F+EM +G
Sbjct: 425 FIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG 484
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
P+ T L++A S EQ TV R M
Sbjct: 485 FVPERETFNTLISAYSRCGSFEQAMTVYRRM 515
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G P +YN L+ AY R G L++A + M G P + ++ LLS F + G V
Sbjct: 344 GFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESA 403
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
I +M +G K + N+ + +YG G+F +M ++ + DI T+N L+
Sbjct: 404 MSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAV 463
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+GQ G ++ G+F+ + G P+ T+ + I AYS+ + + + ++ M+D+G PD
Sbjct: 464 FGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPD 523
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTMD 212
T +LAA + EQ V+ M+
Sbjct: 524 LSTYNTVLAALARGGMWEQSEKVLAEME 551
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 94/185 (50%), Gaps = 1/185 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGF-LNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTG 59
M+ GC+P +YN++++ +G+ G N ++ E MK GI P ++ L++ +
Sbjct: 234 MEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGS 293
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
+ + +M +G D N++L++YG+ + + +VL M I TYN
Sbjct: 294 LHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYN 353
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
LI+ Y + G +D+ L + KG KPDV T+T+ + + + + IFEEM ++
Sbjct: 354 SLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA 413
Query: 180 GCYPD 184
GC P+
Sbjct: 414 GCKPN 418
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 90/180 (50%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G PD ++N L+ +G+ G ++ VF++MKR G P ++ L+SA+S+ G+ +
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ +M +G+ D N++L R G + + E+VL ME+G C+ + TY L++
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
Y I M L + ++S ++P V + + SK L F E+ + G PD
Sbjct: 569 YANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPD 628
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 87/181 (48%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
EP LV + L +AE F ++K G +P + + ++S + + V+K
Sbjct: 591 EPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANG 650
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+L+ M + G NS++ ++ R FGK EE+L + + DI +YN +I Y
Sbjct: 651 VLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYC 710
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGG 186
+ + +F + + G+ PDV+T+ + IG+Y+ ++ + + MI GC P+
Sbjct: 711 RNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQN 770
Query: 187 T 187
T
Sbjct: 771 T 771
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 97/197 (49%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G +PD +Y L+ + RAG + A ++FE+M+ G P + + + + G
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
++ I +++ GL D N++L ++G+ G ++ V M+ + T+N
Sbjct: 435 FTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNT 494
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ Y + G ++ +++ + G+ PD+ T+ + + A ++ ++ + ++ EM D
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR 554
Query: 181 CYPDGGTAKVLLAACSN 197
C P+ T LL A +N
Sbjct: 555 CKPNELTYCSLLHAYAN 571
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 105/248 (42%), Gaps = 35/248 (14%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G PD ++YN ++ A R G +E V +M+ P ++ LL A++
Sbjct: 515 MLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKE 574
Query: 61 V-----------------------------SKC------EDILNQMCKSGLKLDTFVLNS 85
+ SKC E +++ + G D LNS
Sbjct: 575 IGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNS 634
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
M+++YGR K VL M+ ++TYN L+ + ++ K E + + + +KG
Sbjct: 635 MVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKG 694
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVT 205
+KPD++++ + I AY + IF EM +SG PD T + + + + E+
Sbjct: 695 IKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAI 754
Query: 206 TVIRTMDK 213
V+R M K
Sbjct: 755 GVVRYMIK 762
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 93/199 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M++ GC+P+ ++N + YG G + +F+++ G++P + + LL+ F + G
Sbjct: 410 MRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGM 469
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S+ + +M ++G + N++++ Y R G F + V M + D+STYN
Sbjct: 470 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNT 529
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
++ + G ++ E + + KP+ +T+ S + AY+ K + EE+
Sbjct: 530 VLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV 589
Query: 181 CYPDGGTAKVLLAACSNED 199
P K L+ CS D
Sbjct: 590 IEPRAVLLKTLVLVCSKCD 608
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 76/162 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
++ G PD + N +V YGR + A V + MK G TP+M ++ L+ S++ +
Sbjct: 620 LKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSAD 679
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
K E+IL ++ G+K D N+++ Y R + + + M N D+ TYN
Sbjct: 680 FGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNT 739
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSK 162
I Y ++ G+ + + G +P+ T+ S + Y K
Sbjct: 740 FIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCK 781
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 85/192 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G P+R ++N L+ AY R G A V+ M G+TP + ++ +L+A ++ G
Sbjct: 480 MKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGM 539
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ E +L +M K + S+L+ Y + G M + + +G E
Sbjct: 540 WEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKT 599
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L+ + + + E F L +G PD+ T S + Y ++++ + + + M + G
Sbjct: 600 LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG 659
Query: 181 CYPDGGTAKVLL 192
P T L+
Sbjct: 660 FTPSMATYNSLM 671
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 92/191 (48%), Gaps = 1/191 (0%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D + I++ G+ G ++ A +F ++ G + + S+ L+SAF+ +G + ++
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLG-QFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
+M + G K N +LN++G++G + K+ ++ M++ D TYN LI +
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKR 291
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
+ +F+ + + G D VT+ + + Y K +++ EM+ +G P T
Sbjct: 292 GSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVT 351
Query: 188 AKVLLAACSNE 198
L++A + +
Sbjct: 352 YNSLISAYARD 362
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 47/91 (51%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G +PD SYN ++ AY R + DA +F +M+ GI P + ++ + +++ +
Sbjct: 694 GIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEA 753
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQ 95
++ M K G + + NS+++ Y +L +
Sbjct: 754 IGVVRYMIKHGCRPNQNTYNSIVDGYCKLNR 784
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 6/217 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
+ MG P+ SY L+++YGR G N+AEA+F M+ G P+ ++ ++L F +
Sbjct: 165 LSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDK 224
Query: 61 VSKCEDILNQMC---KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADIST 117
+ E++ + KS LK D + + M+ +Y + G + K +V + M T
Sbjct: 225 FKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVT 284
Query: 118 YNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
YN L++ + K ++ + ++PDVV++ I AY + + L +FEEM+
Sbjct: 285 YNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEML 341
Query: 178 DSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
D+G P +LL A + EQ TV ++M +D
Sbjct: 342 DAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 378
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ +PD SY +L+ AYGRA +A +VFE+M G+ PT K++ +LL AF+ +G
Sbjct: 305 MQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGM 364
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V + + + M + + D + +ML+ Y E+ ++ E +I TY
Sbjct: 365 VEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGT 424
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI Y +A ++KM +++ + G+K + T+ + A + K + L ++EM G
Sbjct: 425 LIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCG 484
Query: 181 CYPDGGTAKVLLAACSNEDQTEQV 204
PD VLL+ S +D+ E+
Sbjct: 485 VPPDQKAKNVLLSLASTQDELEEA 508
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 102/246 (41%), Gaps = 35/246 (14%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFE---DMKRVGITPTMKSHMVLLSAFSK 57
MQ G EP +Y I++ + +AE VFE D K+ + P K + +++ + K
Sbjct: 200 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 259
Query: 58 TGNVSKCEDILNQMCKSGLKLDTFVLNSMLN----------LYGRL-------------- 93
GN K + + M G+ T NS+++ +Y ++
Sbjct: 260 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYAL 319
Query: 94 -----GQFGKMEEVLTVME---NGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
G+ + EE L+V E + YNIL++ + +G +++ + +F+ +
Sbjct: 320 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 379
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVT 205
+ PD+ ++T+ + AY + F+ + G P+ T L+ + + E++
Sbjct: 380 IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMM 439
Query: 206 TVIRTM 211
V M
Sbjct: 440 EVYEKM 445
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
++ YG+LG F E VL+V+ ++ +Y L+ YG+ G + E +F+ + S G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID---SGCYPDGGTAKVLLAACSNEDQTE 202
+P +T+ + + + + E+FE ++D S PD +++ E
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 203 QVTTVIRTM 211
+ V +M
Sbjct: 265 KARKVFSSM 273
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 3/136 (2%)
Query: 49 MVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMEN 108
++L++A+ K GN + E +L+ + K G + +++ YGR G+ E + M++
Sbjct: 143 LMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQS 202
Query: 109 GSCEADISTYNILINRYGQAGFIDKMEGLFQLL---HSKGLKPDVVTWTSRIGAYSKKKL 165
E TY I++ + + + E +F+ L LKPD + I Y K
Sbjct: 203 SGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGN 262
Query: 166 YVRCLEIFEEMIDSGC 181
Y + ++F M+ G
Sbjct: 263 YEKARKVFSSMVGKGV 278
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 107 bits (267), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 6/217 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
+ MG P+ SY L+++YGR G N+AEA+F M+ G P+ ++ ++L F +
Sbjct: 172 LSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDK 231
Query: 61 VSKCEDILNQMC---KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADIST 117
+ E++ + KS LK D + + M+ +Y + G + K +V + M T
Sbjct: 232 FKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVT 291
Query: 118 YNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
YN L++ + K ++ + ++PDVV++ I AY + + L +FEEM+
Sbjct: 292 YNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEML 348
Query: 178 DSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
D+G P +LL A + EQ TV ++M +D
Sbjct: 349 DAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 385
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 103/203 (50%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ +PD SY +L+ AYGRA +A +VFE+M G+ PT K++ +LL AF+ +G
Sbjct: 312 MQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGM 371
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V + + + M + + D + +ML+ Y E+ ++ E +I TY
Sbjct: 372 VEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGT 431
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI Y +A ++KM +++ + G+K + T+ + A + K + L ++EM G
Sbjct: 432 LIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCG 491
Query: 181 CYPDGGTAKVLLAACSNEDQTEQ 203
PD VLL+ S +D+ E+
Sbjct: 492 VPPDQKAKNVLLSLASTQDELEE 514
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 102/246 (41%), Gaps = 35/246 (14%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFE---DMKRVGITPTMKSHMVLLSAFSK 57
MQ G EP +Y I++ + +AE VFE D K+ + P K + +++ + K
Sbjct: 207 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 266
Query: 58 TGNVSKCEDILNQMCKSGLKLDTFVLNSMLN----------LYGRL-------------- 93
GN K + + M G+ T NS+++ +Y ++
Sbjct: 267 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYAL 326
Query: 94 -----GQFGKMEEVLTVME---NGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
G+ + EE L+V E + YNIL++ + +G +++ + +F+ +
Sbjct: 327 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 386
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVT 205
+ PD+ ++T+ + AY + F+ + G P+ T L+ + + E++
Sbjct: 387 IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMM 446
Query: 206 TVIRTM 211
V M
Sbjct: 447 EVYEKM 452
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
++ YG+LG F E VL+V+ ++ +Y L+ YG+ G + E +F+ + S G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID---SGCYPDGGTAKVLLAACSNEDQTE 202
+P +T+ + + + + E+FE ++D S PD +++ E
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 203 QVTTVIRTM 211
+ V +M
Sbjct: 272 KARKVFSSM 280
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 3/136 (2%)
Query: 49 MVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMEN 108
++L++A+ K GN + E +L+ + K G + +++ YGR G+ E + M++
Sbjct: 150 LMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQS 209
Query: 109 GSCEADISTYNILINRYGQAGFIDKMEGLFQLL---HSKGLKPDVVTWTSRIGAYSKKKL 165
E TY I++ + + + E +F+ L LKPD + I Y K
Sbjct: 210 SGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGN 269
Query: 166 YVRCLEIFEEMIDSGC 181
Y + ++F M+ G
Sbjct: 270 YEKARKVFSSMVGKGV 285
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 112/236 (47%), Gaps = 36/236 (15%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTG-NVSKCEDI 67
D +Y ++ AY R G A +FE MK +G +PT+ ++ V+L F K G + K +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 68 LNQMCKSGLKLDTFV-----------------------------------LNSMLNLYGR 92
L++M GLK D F N++L ++G+
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 93 LGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVT 152
G + + VL ME SC AD TYN L+ Y +AGF + G+ +++ KG+ P+ +T
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT 388
Query: 153 WTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVI 208
+T+ I AY K L++F M ++GC P+ T +L+ + ++ ++ ++
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKML 444
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ C D +YN LV AY RAGF +A V E M + G+ P ++ ++ A+ K G
Sbjct: 342 MEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGK 401
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + M ++G +T N++L+L G+ + +M ++L M++ C + +T+N
Sbjct: 402 EDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNT 461
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
++ G G + +F+ + S G +PD T+ + I AY + V +++ EM +G
Sbjct: 462 MLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAG 521
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
T LL A + + VI M
Sbjct: 522 FNACVTTYNALLNALARKGDWRSGENVISDM 552
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G + D + + ++ A R G L +A+ F ++K G P ++ LL F K G
Sbjct: 272 MRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGV 331
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
++ +L +M ++ D+ N ++ Y R G + V+ +M + TY
Sbjct: 332 YTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTT 391
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I+ YG+AG D+ LF + G P+ T+ + + KK +++ +M +G
Sbjct: 392 VIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNG 451
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
C P+ T +LA C N+ + V V R M
Sbjct: 452 CSPNRATWNTMLALCGNKGMDKFVNRVFREM 482
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 110/284 (38%), Gaps = 70/284 (24%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDA------------------------------- 29
M+ G EPDR ++N L+ AYGR G DA
Sbjct: 482 MKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGD 541
Query: 30 ----EAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM-------------- 71
E V DMK G PT S+ ++L ++K GN E I N++
Sbjct: 542 WRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRT 601
Query: 72 -------C--------------KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGS 110
C K G K D + NSML+++ R + + E +L +
Sbjct: 602 LLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDG 661
Query: 111 CEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCL 170
D+ TYN L++ Y + G K E + + L LKPD+V++ + I + ++ L +
Sbjct: 662 LSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAV 721
Query: 171 EIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
+ EM + G P T ++ + ++ VI M K+
Sbjct: 722 RMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKN 765
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 83/167 (49%)
Query: 26 LNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNS 85
L +E F K+ G P M +LS F++ + E IL + + GL D NS
Sbjct: 612 LAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNS 671
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
++++Y R G+ K EE+L +E + D+ +YN +I + + G + + + + +G
Sbjct: 672 LMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG 731
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLL 192
++P + T+ + + Y+ ++ ++ E M + C P+ T K+++
Sbjct: 732 IRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVV 778
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 91/194 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
++ G EP +YN L+ +G+AG +A +V ++M+ ++ L++A+ + G
Sbjct: 307 LKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGF 366
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ ++ M K G+ + ++++ YG+ G+ + ++ M+ C + TYN
Sbjct: 367 SKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNA 426
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+++ G+ ++M + + S G P+ TW + + K + +F EM G
Sbjct: 427 VLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCG 486
Query: 181 CYPDGGTAKVLLAA 194
PD T L++A
Sbjct: 487 FEPDRDTFNTLISA 500
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G P+ +Y ++DAYG+AG ++A +F MK G P ++ +LS K
Sbjct: 377 MTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSR 436
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
++ +L M +G + N+ML L G G + V M++ E D T+N
Sbjct: 437 SNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNT 496
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ YG+ G ++ + G V T+ + + A ++K + + +M G
Sbjct: 497 LISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKG 556
Query: 181 CYPDGGTAKVLL 192
P + ++L
Sbjct: 557 FKPTETSYSLML 568
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 68/125 (54%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G PD +YN L+D Y R G AE + + +++ + P + S+ ++ F + G + +
Sbjct: 661 GLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEA 720
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+L++M + G++ F N+ ++ Y +G F ++E+V+ M C + T+ ++++
Sbjct: 721 VRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDG 780
Query: 125 YGQAG 129
Y +AG
Sbjct: 781 YCRAG 785
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 95/206 (46%), Gaps = 1/206 (0%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D I V GR + A + + + ++++ +L A+S+TG K D+
Sbjct: 174 DHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLF 233
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQ-FGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
+M + G N +L+++G++G+ + K+ VL M + + D T + +++ +
Sbjct: 234 ERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAR 293
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
G + + + F L S G +P VT+ + + + K +Y L + +EM ++ C D T
Sbjct: 294 EGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVT 353
Query: 188 AKVLLAACSNEDQTEQVTTVIRTMDK 213
L+AA +++ VI M K
Sbjct: 354 YNELVAAYVRAGFSKEAAGVIEMMTK 379
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 82/194 (42%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ GC P+ +YN ++ G+ N+ + DMK G +P + +L+ G
Sbjct: 412 MKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGM 471
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ +M G + D N++++ YGR G ++ M A ++TYN
Sbjct: 472 DKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNA 531
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L+N + G E + + SKG KP +++ + Y+K Y+ I + +
Sbjct: 532 LLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQ 591
Query: 181 CYPDGGTAKVLLAA 194
+P + LL A
Sbjct: 592 IFPSWMLLRTLLLA 605
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 66/138 (47%), Gaps = 1/138 (0%)
Query: 78 LDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAG-FIDKMEG 136
LD ++L+ Y R G++ K ++ M+ + TYN++++ +G+ G K+ G
Sbjct: 208 LDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILG 267
Query: 137 LFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACS 196
+ + SKGLK D T ++ + A +++ L E F E+ G P T LL
Sbjct: 268 VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 197 NEDQTEQVTTVIRTMDKD 214
+ +V++ M+++
Sbjct: 328 KAGVYTEALSVLKEMEEN 345
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 48/92 (52%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
+PD SYN ++ + R G + +A + +M GI P + ++ +S ++ G ++ ED
Sbjct: 698 KPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIED 757
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGK 98
++ M K+ + + +++ Y R G++ +
Sbjct: 758 VIECMAKNDCRPNELTFKMVVDGYCRAGKYSE 789
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Query: 75 GLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKM 134
LKLD V+ + + GR Q+ ++L + D+ Y +++ Y + G +K
Sbjct: 170 ALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKA 229
Query: 135 EGLFQLLHSKGLKPDVVTWTSRIGAYSKK-KLYVRCLEIFEEMIDSGCYPDGGTAKVLLA 193
LF+ + G P +VT+ + + K + + + L + +EM G D T +L+
Sbjct: 230 IDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLS 289
Query: 194 ACSNE 198
AC+ E
Sbjct: 290 ACARE 294
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+H G +PD +YN L+ A G ++AE VF M GI P + ++ L+ F K
Sbjct: 238 MRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRR 297
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ K D+L +M G D N +L Y + G + V M+ C + +TY++
Sbjct: 298 LEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSV 357
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L+N +GQ+G D + LF + S PD T+ I + + + + +F +M++
Sbjct: 358 LLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEEN 417
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
PD T + ++ AC E +++ M
Sbjct: 418 IEPDMETYEGIIFACGKGGLHEDARKILQYM 448
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 88/192 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G PD SYN+L++AY ++G + +A VF M+ G TP ++ VLL+ F ++G
Sbjct: 308 MASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGR 367
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ +M S D N ++ ++G G F ++ + M + E D+ TY
Sbjct: 368 YDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEG 427
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I G+ G + + Q + + + P +T I A+ + LY L F M + G
Sbjct: 428 IIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVG 487
Query: 181 CYPDGGTAKVLL 192
P T LL
Sbjct: 488 SNPSIETFHSLL 499
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 103/214 (48%), Gaps = 5/214 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAV---FEDMKRVGITPTMKSHMVLLSAFSK 57
M++ P +YN +++A R G D E + F +M+ GI P + ++ LLSA +
Sbjct: 202 MKNEKISPSILTYNTVINACARGGL--DWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAI 259
Query: 58 TGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADIST 117
G + E + M G+ D + ++ +G+L + K+ ++L M +G DI++
Sbjct: 260 RGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITS 319
Query: 118 YNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
YN+L+ Y ++G I + G+F + + G P+ T++ + + + Y ++F EM
Sbjct: 320 YNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMK 379
Query: 178 DSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
S PD T +L+ ++V T+ M
Sbjct: 380 SSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDM 413
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 101/211 (47%), Gaps = 1/211 (0%)
Query: 2 QHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNV 61
+ + C+P+ Y I++ GR G L+ VF++M G++ ++ S+ L++A+ + G
Sbjct: 133 RQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRY 192
Query: 62 SKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLG-QFGKMEEVLTVMENGSCEADISTYNI 120
++L++M + N+++N R G + + + M + + DI TYN
Sbjct: 193 ETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNT 252
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L++ G D+ E +F+ ++ G+ PD+ T++ + + K + + ++ EM G
Sbjct: 253 LLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGG 312
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
PD + VLL A + ++ V M
Sbjct: 313 SLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 343
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 18/222 (8%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDM-----------------KRVGITPTMKSHMV 50
P R S +D + LND VF++ +++ P + +
Sbjct: 87 PPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTI 146
Query: 51 LLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGS 110
++S + G + KC ++ ++M G+ F +++N YGR G++ E+L M+N
Sbjct: 147 MISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEK 206
Query: 111 CEADISTYNILINRYGQAGF-IDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRC 169
I TYN +IN + G + + GLF + +G++PD+VT+ + + A + + L
Sbjct: 207 ISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEA 266
Query: 170 LEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+F M D G PD T L+ + E+V ++ M
Sbjct: 267 EMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEM 308
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 86/172 (50%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P +Y +++A+G+A +A F M VG P++++ LL +F++ G V + E I
Sbjct: 455 PSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAI 514
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
L+++ SG+ + N+ + Y + G+F + + ME C+ D T +++ Y
Sbjct: 515 LSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSF 574
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
A +D+ F+ + + + P ++ + + Y K + + E+ EEM+ +
Sbjct: 575 ARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSN 626
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 94/193 (48%), Gaps = 1/193 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTG- 59
M G SY L++AYGR G + + + MK I+P++ ++ +++A ++ G
Sbjct: 167 MPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGL 226
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
+ + +M G++ D N++L+ G + E V M +G D++TY+
Sbjct: 227 DWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYS 286
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
L+ +G+ ++K+ L + S G PD+ ++ + AY+K + +F +M +
Sbjct: 287 HLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAA 346
Query: 180 GCYPDGGTAKVLL 192
GC P+ T VLL
Sbjct: 347 GCTPNANTYSVLL 359
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 88/196 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ +PD A+YNIL++ +G G+ + +F DM I P M+++ ++ A K G
Sbjct: 378 MKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGL 437
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
IL M + + + ++ +G+ + + M I T++
Sbjct: 438 HEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHS 497
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L+ + + G + + E + L G+ + T+ ++I AY + + ++ + +M S
Sbjct: 498 LLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSR 557
Query: 181 CYPDGGTAKVLLAACS 196
C PD T + +L+ S
Sbjct: 558 CDPDERTLEAVLSVYS 573
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 91/213 (42%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ GC P+ +Y++L++ +G++G +D +F +MK P ++ +L+ F + G
Sbjct: 343 MQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 402
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + + M + ++ D ++ G+ G ++L M Y
Sbjct: 403 FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTG 462
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I +GQA ++ F +H G P + T+ S + ++++ L I ++DSG
Sbjct: 463 VIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSG 522
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
+ T + A + E+ M+K
Sbjct: 523 IPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEK 555
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 86/205 (41%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
EPD +Y ++ A G+ G DA + + M I P+ K++ ++ AF + +
Sbjct: 419 EPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALV 478
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
N M + G +S+L + R G + E +L+ + + + T+N I Y
Sbjct: 479 AFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYK 538
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGG 186
Q G ++ + + PD T + + YS +L C E FEEM S P
Sbjct: 539 QGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIM 598
Query: 187 TAKVLLAACSNEDQTEQVTTVIRTM 211
++LA ++ + V ++ M
Sbjct: 599 CYCMMLAVYGKTERWDDVNELLEEM 623
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 113/244 (46%), Gaps = 35/244 (14%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C+P+ +YNIL+ A+ ++G ++ A+F+D+ ++P + + ++ A+ K G + + E
Sbjct: 204 CQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEME 263
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+L +M + K D N +++ YG+ +F KME+ + + + T+N +I Y
Sbjct: 264 AVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINY 323
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEE---------- 175
G+A IDK E +F+ ++ P +T+ I Y R EIFEE
Sbjct: 324 GKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKA 383
Query: 176 -----MIDSGC--------------------YPDGGTAKVLLAACSNEDQTEQVTTVIRT 210
M++ C +PD T K L A + D EQV +++
Sbjct: 384 STLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKK 443
Query: 211 MDKD 214
M+KD
Sbjct: 444 MEKD 447
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 98/188 (52%), Gaps = 5/188 (2%)
Query: 1 MQHMGCEPDRASYNILVDAY----GRAGFLNDAEAVFEDMKRV-GITPTMKSHMVLLSAF 55
M++ GC PD + YN L+ A+ +A L + MK + P + ++ +LL AF
Sbjct: 159 MKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAF 218
Query: 56 SKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADI 115
+++G V + + + S + D + N +++ YG+ G +ME VLT M + C+ DI
Sbjct: 219 AQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDI 278
Query: 116 STYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEE 175
T+N+LI+ YG+ +KME F+ L KP + T+ S I Y K ++ + +F++
Sbjct: 279 ITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKK 338
Query: 176 MIDSGCYP 183
M D P
Sbjct: 339 MNDMNYIP 346
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 80/167 (47%), Gaps = 13/167 (7%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
+P ++N ++ YG+A ++ AE VF+ M + P+ ++ ++ + G+VS+ +
Sbjct: 310 KPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRARE 369
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
I ++ +S L LN+ML +Y R G + + +++ D STY L Y
Sbjct: 370 IFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYT 429
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIF 173
+A ++++ L + + G+ P+ K+ ++ LE+F
Sbjct: 430 KADMKEQVQILMKKMEKDGIVPN-------------KRFFLEALEVF 463
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 86/204 (42%), Gaps = 30/204 (14%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
PD Y+ L+ G+ G A +F +MK G P + L++A T + +K
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAK---- 186
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
++ + G L + +E C+ ++ TYNIL+ + Q
Sbjct: 187 -----------------ALEKVRGYLDKMKGIER---------CQPNVVTYNILLRAFAQ 220
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
+G +D++ LF+ L + PDV T+ + AY K + + M + C PD T
Sbjct: 221 SGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIIT 280
Query: 188 AKVLLAACSNEDQTEQVTTVIRTM 211
VL+ + + + E++ +++
Sbjct: 281 FNVLIDSYGKKQEFEKMEQTFKSL 304
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 113/244 (46%), Gaps = 35/244 (14%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C+P+ +YNIL+ A+ ++G ++ A+F+D+ ++P + + ++ A+ K G + + E
Sbjct: 204 CQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEME 263
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+L +M + K D N +++ YG+ +F KME+ + + + T+N +I Y
Sbjct: 264 AVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINY 323
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEE---------- 175
G+A IDK E +F+ ++ P +T+ I Y R EIFEE
Sbjct: 324 GKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKA 383
Query: 176 -----MIDSGC--------------------YPDGGTAKVLLAACSNEDQTEQVTTVIRT 210
M++ C +PD T K L A + D EQV +++
Sbjct: 384 STLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKK 443
Query: 211 MDKD 214
M+KD
Sbjct: 444 MEKD 447
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 98/188 (52%), Gaps = 5/188 (2%)
Query: 1 MQHMGCEPDRASYNILVDAY----GRAGFLNDAEAVFEDMKRV-GITPTMKSHMVLLSAF 55
M++ GC PD + YN L+ A+ +A L + MK + P + ++ +LL AF
Sbjct: 159 MKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAF 218
Query: 56 SKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADI 115
+++G V + + + S + D + N +++ YG+ G +ME VLT M + C+ DI
Sbjct: 219 AQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDI 278
Query: 116 STYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEE 175
T+N+LI+ YG+ +KME F+ L KP + T+ S I Y K ++ + +F++
Sbjct: 279 ITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKK 338
Query: 176 MIDSGCYP 183
M D P
Sbjct: 339 MNDMNYIP 346
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 80/167 (47%), Gaps = 13/167 (7%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
+P ++N ++ YG+A ++ AE VF+ M + P+ ++ ++ + G+VS+ +
Sbjct: 310 KPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRARE 369
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
I ++ +S L LN+ML +Y R G + + +++ D STY L Y
Sbjct: 370 IFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYT 429
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIF 173
+A ++++ L + + G+ P+ K+ ++ LE+F
Sbjct: 430 KADMKEQVQILMKKMEKDGIVPN-------------KRFFLEALEVF 463
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 86/204 (42%), Gaps = 30/204 (14%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
PD Y+ L+ G+ G A +F +MK G P + L++A T + +K
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAK---- 186
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
++ + G L + +E C+ ++ TYNIL+ + Q
Sbjct: 187 -----------------ALEKVRGYLDKMKGIER---------CQPNVVTYNILLRAFAQ 220
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
+G +D++ LF+ L + PDV T+ + AY K + + M + C PD T
Sbjct: 221 SGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIIT 280
Query: 188 AKVLLAACSNEDQTEQVTTVIRTM 211
VL+ + + + E++ +++
Sbjct: 281 FNVLIDSYGKKQEFEKMEQTFKSL 304
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 101/201 (50%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ GC P +YNI++++YG +D + + MK GI P + +H L+ + K+G
Sbjct: 505 MERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGR 564
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + L +M GLK + + N+++N Y + G + VM + + + N
Sbjct: 565 FNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNS 624
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN +G+ + + Q + G+KPDVVT+T+ + A + + + ++EEMI SG
Sbjct: 625 LINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSG 684
Query: 181 CYPDGGTAKVLLAACSNEDQT 201
C PD +L +A QT
Sbjct: 685 CKPDRKARSMLRSALRYMKQT 705
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 112/211 (53%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
++ G +P +YN L+ Y + G L DAE++ +M++ G++P ++ +L+ A+ G
Sbjct: 330 LRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGR 389
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+L +M ++ ++FV + +L + G++ K +VL M++ + D YN+
Sbjct: 390 WESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNV 449
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I+ +G+ +D F + S+G++PD VTW + I + K ++ E+FE M G
Sbjct: 450 VIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRG 509
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
C P T +++ + ++++ + + ++ M
Sbjct: 510 CLPCATTYNIMINSYGDQERWDDMKRLLGKM 540
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 104/207 (50%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G EPDR ++N L+D + + G AE +FE M+R G P ++ ++++++
Sbjct: 474 GIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDM 533
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ +L +M G+ + +++++YG+ G+F E L M++ + + YN LIN
Sbjct: 534 KRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINA 593
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
Y Q G ++ F+++ S GLKP ++ S I A+ + + + + M ++G PD
Sbjct: 594 YAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPD 653
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTM 211
T L+ A D+ ++V V M
Sbjct: 654 VVTYTTLMKALIRVDKFQKVPVVYEEM 680
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 107/249 (42%), Gaps = 35/249 (14%)
Query: 1 MQHMGCEPDRASYNILVDAY---GR---------------------------AGFLNDAE 30
M+ G PD +Y++L+DAY GR AGF + E
Sbjct: 365 MEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGE 424
Query: 31 -----AVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNS 85
V ++MK +G+ P + + V++ F K + ++M G++ D N+
Sbjct: 425 WQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNT 484
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
+++ + + G+ EE+ ME C +TYNI+IN YG D M+ L + S+G
Sbjct: 485 LIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQG 544
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVT 205
+ P+VVT T+ + Y K + +E EEM G P L+ A + +EQ
Sbjct: 545 ILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAV 604
Query: 206 TVIRTMDKD 214
R M D
Sbjct: 605 NAFRVMTSD 613
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/171 (19%), Positives = 82/171 (47%)
Query: 14 NILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCK 73
N ++ + ++G + A + + G++ + + ++SA + +G + E + ++ +
Sbjct: 273 NDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQ 332
Query: 74 SGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDK 133
SG+K T N++L Y + G E +++ ME D TY++LI+ Y AG +
Sbjct: 333 SGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWES 392
Query: 134 MEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ + + + ++P+ ++ + + + + + ++ +EM G PD
Sbjct: 393 ARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPD 443
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 88/203 (43%), Gaps = 2/203 (0%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE--DILN 69
+YN L+ A R + A + M++ G ++ +++ + +++ + +
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYK 258
Query: 70 QMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAG 129
++ + L+LD ++N ++ + + G K ++L + + A +T +I+ +G
Sbjct: 259 EIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSG 318
Query: 130 FIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAK 189
+ E LF+ L G+KP + + + Y K + EM G PD T
Sbjct: 319 RTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYS 378
Query: 190 VLLAACSNEDQTEQVTTVIRTMD 212
+L+ A N + E V++ M+
Sbjct: 379 LLIDAYVNAGRWESARIVLKEME 401
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/213 (18%), Positives = 94/213 (44%), Gaps = 2/213 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAE--AVFEDMKRVGITPTMKSHMVLLSAFSKT 58
M+ G + D +Y++++ + R+ ++ ++++++R + ++ ++ F+K+
Sbjct: 223 MRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKS 282
Query: 59 GNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTY 118
G+ SK +L +GL T L S+++ G+ + E + + + Y
Sbjct: 283 GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAY 342
Query: 119 NILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID 178
N L+ Y + G + E + + +G+ PD T++ I AY + + +EM
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 179 SGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
P+ LLA + + ++ V++ M
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEM 435
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 109/202 (53%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ +G +P SY L+ AY +G+ A A FE+M + GI P+++++ +L AF ++G+
Sbjct: 476 MKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGD 535
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
K +I M + +K N++L+ + + G + + +V++ + + TYN+
Sbjct: 536 TGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNM 595
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L+N Y + G K+ L + + + LKPD +T+++ I A+ + + + R + M+ SG
Sbjct: 596 LMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSG 655
Query: 181 CYPDGGTAKVLLAACSNEDQTE 202
PD + + L A ++ +T+
Sbjct: 656 QVPDPRSYEKLRAILEDKAKTK 677
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 1/212 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G + + + LV ++ G +A + +M++ GI + L+ A++K+ +
Sbjct: 335 MSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNH 394
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + E + +M GLK N +++ Y R Q +E +L ME+ E ++ +Y
Sbjct: 395 IEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTC 454
Query: 121 LINRYGQAGFIDKMEG-LFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
LI+ YG+ + M F + GLKP ++T+ I AYS + + FEEM
Sbjct: 455 LISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKE 514
Query: 180 GCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
G P T +L A T ++ + + M
Sbjct: 515 GIKPSVETYTSVLDAFRRSGDTGKLMEIWKLM 546
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 97/216 (44%), Gaps = 2/216 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAG-FLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTG 59
M + PD + IL+ +AG + +FE M G+ + L+ +F G
Sbjct: 299 MDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEG 358
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
+ I +M K G++ +T V N++++ Y + ++E + T M + + +TYN
Sbjct: 359 LKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYN 418
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSK-KKLYVRCLEIFEEMID 178
IL++ Y + D +E L + + GL+P+V ++T I AY + KK+ + F M
Sbjct: 419 ILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKK 478
Query: 179 SGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
G P + L+ A S E+ M K+
Sbjct: 479 VGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKE 514
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 86/183 (46%), Gaps = 1/183 (0%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSK-CEDILNQM 71
YN + + +DA V+E M ++ + P + +L++ K G +K +I +M
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 72 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
+ G+K V ++ + G + + T ME ++ YN L++ Y ++ I
Sbjct: 336 SEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHI 395
Query: 132 DKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVL 191
+++EGLF + KGLKP T+ + AY+++ + EM D G P+ + L
Sbjct: 396 EEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCL 455
Query: 192 LAA 194
++A
Sbjct: 456 ISA 458
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 1/213 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ +G +P +Y + +D YG++G A FE MK GI P + + L + +K G
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 483
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + I + GL D+ N M+ Y ++G+ + ++L+ M CE D+ N
Sbjct: 484 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNS 543
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN +A +D+ +F + LKP VVT+ + + K +E+FE M+ G
Sbjct: 544 LINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 603
Query: 181 CYPDGGTAKVLL-AACSNEDQTEQVTTVIRTMD 212
C P+ T L C N++ T + + + MD
Sbjct: 604 CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMD 636
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 7/195 (3%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC P+ A YNIL++ +G+AG + A A+F+ M + G+ P +K++ VL+ G
Sbjct: 917 MLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 976
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVME----NGSCEADIS 116
V + ++ +SGL D N ++N LG+ ++EE L + + D+
Sbjct: 977 VDEGLHYFKELKESGLNPDVVCYNLIIN---GLGKSHRLEEALVLFNEMKTSRGITPDLY 1033
Query: 117 TYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
TYN LI G AG +++ ++ + GL+P+V T+ + I YS +++ M
Sbjct: 1034 TYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Query: 177 IDSGCYPDGGTAKVL 191
+ G P+ GT + L
Sbjct: 1094 VTGGFSPNTGTYEQL 1108
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 101/212 (47%), Gaps = 1/212 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
++ GC PD A+YN L+DAYG++G +++ ++++M +H +++S K GN
Sbjct: 811 VKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGN 870
Query: 61 VSKCEDI-LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
V D+ + M +++ + G+ + +++ M + C + + YN
Sbjct: 871 VDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYN 930
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
ILIN +G+AG D LF+ + +G++PD+ T++ + L F+E+ +S
Sbjct: 931 ILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES 990
Query: 180 GCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
G PD +++ + E+ + M
Sbjct: 991 GLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 85/184 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC PD +Y +L+DA A L+ A+ VFE MK P +++ LL FS +
Sbjct: 284 MDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRD 343
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + ++M K G D +++ + G FG+ + L VM + ++ TYN
Sbjct: 344 LDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNT 403
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI + +D LF + S G+KP T+ I Y K V LE FE+M G
Sbjct: 404 LICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKG 463
Query: 181 CYPD 184
P+
Sbjct: 464 IAPN 467
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 92/194 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G + SYN L+ ++ F +A V+ M G P+++++ L+ K +
Sbjct: 179 MREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRD 238
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ +L +M GLK + + + + GR G+ + E+L M++ C D+ TY +
Sbjct: 239 IDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTV 298
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ A +D + +F+ + + KPD VT+ + + +S + + + EM G
Sbjct: 299 LIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 358
Query: 181 CYPDGGTAKVLLAA 194
PD T +L+ A
Sbjct: 359 HVPDVVTFTILVDA 372
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 88/188 (46%), Gaps = 2/188 (1%)
Query: 29 AEAVFEDM-KRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSML 87
A +FE K +G+ P + ++ +L+ + + +D+ Q+ +G D N +L
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL 827
Query: 88 NLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI-DKMEGLFQLLHSKGL 146
+ YG+ G+ ++ E+ M CEA+ T+NI+I+ +AG + D ++ + L+ +
Sbjct: 828 DAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 887
Query: 147 KPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTT 206
P T+ I SK ++FE M+D GC P+ +L+ + +
Sbjct: 888 SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACA 947
Query: 207 VIRTMDKD 214
+ + M K+
Sbjct: 948 LFKRMVKE 955
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 89/211 (42%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G PD ++ ILVDA +AG +A + M+ GI P + ++ L+ +
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHR 413
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ ++ M G+K + ++ YG+ G E M+ +I N
Sbjct: 414 LDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNA 473
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+ +AG + + +F L GL PD VT+ + YSK +++ EM+++G
Sbjct: 474 SLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG 533
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
C PD L+ D+ ++ + M
Sbjct: 534 CEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 98/207 (47%), Gaps = 4/207 (1%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
+PDR +Y L+D + L+ + + +M++ G P + + +L+ A K GN + D
Sbjct: 325 KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFD 384
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
L+ M G+ + N+++ R+ + E+ ME+ + TY + I+ YG
Sbjct: 385 TLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYG 444
Query: 127 QAGFIDKMEGL--FQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
++G D + L F+ + +KG+ P++V + + + +K +IF + D G PD
Sbjct: 445 KSG--DSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 502
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTM 211
T +++ S + ++ ++ M
Sbjct: 503 SVTYNMMMKCYSKVGEIDEAIKLLSEM 529
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRV-GITPTMKSHMVLLSAFSKTG 59
++ G PD YN++++ G++ L +A +F +MK GITP + ++ L+ G
Sbjct: 987 LKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAG 1046
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
V + I N++ ++GL+ + F N+++ Y G+ V M G + TY
Sbjct: 1047 MVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYE 1106
Query: 120 ILINR 124
L NR
Sbjct: 1107 QLPNR 1111
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 87/214 (40%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ + D +Y + + G L A M+ G S+ L+ K+
Sbjct: 144 MQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRF 203
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
++ ++ +M G + +S++ G+ + +L ME + ++ T+ I
Sbjct: 204 CTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTI 263
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
I G+AG I++ + + + +G PDVVT+T I A + E+FE+M
Sbjct: 264 CIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGR 323
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
PD T LL S+ + V M+KD
Sbjct: 324 HKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKD 357
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 97/177 (54%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P+ SY+ ++D + +AG ++A +F +M+ +GI S+ LLS ++K G + DI
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI 466
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
L +M G+K D N++L YG+ G++ ++++V T M+ ++ TY+ LI+ Y +
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSK 526
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
G + +F+ S GL+ DVV +++ I A K L + + +EM G P+
Sbjct: 527 GGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPN 583
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 107/214 (50%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M + E D SYN L+DA + G ++ A + M I P + S+ ++ F+K G
Sbjct: 365 MTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGR 424
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ ++ +M G+ LD N++L++Y ++G+ + ++L M + + D+ TYN
Sbjct: 425 FDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNA 484
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L+ YG+ G D+++ +F + + + P+++T+++ I YSK LY +EIF E +G
Sbjct: 485 LLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAG 544
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
D L+ A ++I M K+
Sbjct: 545 LRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE 578
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 100/201 (49%), Gaps = 1/201 (0%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTG-NVSKCEDILNQ 70
+++ L+ AYGR+G +A +VF MK G+ P + ++ ++ A K G + ++
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 71 MCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGF 130
M ++G++ D NS+L + R G + + M N E D+ +YN L++ + G
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 131 IDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKV 190
+D + + K + P+VV++++ I ++K + L +F EM G D +
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 191 LLAACSNEDQTEQVTTVIRTM 211
LL+ + ++E+ ++R M
Sbjct: 450 LLSIYTKVGRSEEALDILREM 470
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 1/215 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGF-LNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTG 59
M+ G P+ +YN ++DA G+ G F++M+R G+ P + LL+ S+ G
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
++ ++M ++ D F N++L+ + GQ E+L M ++ +Y+
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
+I+ + +AG D+ LF + G+ D V++ + + Y+K L+I EM
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 180 GCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
G D T LL + + ++V V M ++
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE 508
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 96/209 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ G +PDR ++N L+ R G A +F++M I + S+ LL A K G
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ +IL QM + + +++++ + + G+F + + M D +YN
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L++ Y + G ++ + + + S G+K DVVT+ + +G Y K+ Y ++F EM
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIR 209
P+ T L+ S ++ + R
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFR 538
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 78/190 (41%), Gaps = 21/190 (11%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P+ +Y+ L+D Y + G +A +F + K G+ + + L+ A K G V +
Sbjct: 512 PNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSL 571
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRL------------GQFGKMEEVLTVMENGSCEADI 115
+++M K G+ + NS+++ +GR G L+ + I
Sbjct: 572 IDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVI 631
Query: 116 STYNILINRYGQAGFIDKMEGL---------FQLLHSKGLKPDVVTWTSRIGAYSKKKLY 166
+ L D EG+ F+ +H +KP+VVT+++ + A S+ +
Sbjct: 632 QLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSF 691
Query: 167 VRCLEIFEEM 176
+ EE+
Sbjct: 692 EDASMLLEEL 701
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Query: 84 NSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHS 143
++M++ GR G+ + + G + ++ LI+ YG++G ++ +F +
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 144 KGLKPDVVTWTSRIGAYSKKKL-YVRCLEIFEEMIDSGCYPDGGTAKVLLAACS 196
GL+P++VT+ + I A K + + + + F+EM +G PD T LLA CS
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCS 350
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 1/214 (0%)
Query: 4 MGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSK 63
+G PD Y ++D Y G + A F + + G P++ + +L+ A S+ G++S
Sbjct: 402 LGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISD 461
Query: 64 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN 123
E + M GLKLD N++++ YG+ Q K+ E++ M + D++TYNILI+
Sbjct: 462 AESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIH 521
Query: 124 RYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYP 183
G+ID+ + L +G P + +T IG +SK+ + ++ M D P
Sbjct: 522 SMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKP 581
Query: 184 DGGTAKVLLAA-CSNEDQTEQVTTVIRTMDKDIK 216
D T LL C + + + + +D +K
Sbjct: 582 DVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLK 615
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 100/240 (41%), Gaps = 32/240 (13%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGIT------------------ 42
M+H G PD ++ + +D +AGFL +A +V +K GI+
Sbjct: 297 MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGK 356
Query: 43 --------------PTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLN 88
P + + LS TG++ + I ++ + GL D +M++
Sbjct: 357 PEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMID 416
Query: 89 LYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKP 148
Y LG+ K + + ++T ILI + G I E +F+ + ++GLK
Sbjct: 417 GYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKL 476
Query: 149 DVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVI 208
DVVT+ + + Y K + E+ +EM +G PD T +L+ + ++ +I
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 92/192 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G + D +YN L+ YG+ LN + ++M+ GI+P + ++ +L+ + G
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY 528
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + +I++++ + G T ++ + + G F + + M + + D+ T +
Sbjct: 529 IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSA 588
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L++ Y +A ++K LF L GLKPDVV + + I Y + E+ M+ G
Sbjct: 589 LLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Query: 181 CYPDGGTAKVLL 192
P+ T L+
Sbjct: 649 MLPNESTHHALV 660
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 89/180 (49%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G P + IL+ A R G ++DAE+VF +MK G+ + ++ L+ + KT ++K
Sbjct: 438 GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKV 497
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+++++M +G+ D N +++ G + E+++ + + +I
Sbjct: 498 FELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ + G + L+ + +KPDVVT ++ + Y K + + + +F +++D+G PD
Sbjct: 558 FSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPD 617
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 32/204 (15%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 72
++IL+D R +N A + + + GI P+ + LL + + + + M
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHML 263
Query: 73 KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGF-- 130
G L+ VL+ + Y G F K E+L M++ DI + + I++ +AGF
Sbjct: 264 SRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLK 323
Query: 131 ------------------------------IDKMEGLFQLLHSKGLKPDVVTWTSRIGAY 160
+ K E +L+HS L+P++ ++S +
Sbjct: 324 EATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNI 383
Query: 161 SKKKLYVRCLEIFEEMIDSGCYPD 184
+R IF+E+ + G PD
Sbjct: 384 CSTGDMLRASTIFQEIFELGLLPD 407
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 1/214 (0%)
Query: 4 MGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSK 63
+G PD Y ++D Y G + A F + + G P++ + +L+ A S+ G++S
Sbjct: 402 LGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISD 461
Query: 64 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN 123
E + M GLKLD N++++ YG+ Q K+ E++ M + D++TYNILI+
Sbjct: 462 AESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIH 521
Query: 124 RYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYP 183
G+ID+ + L +G P + +T IG +SK+ + ++ M D P
Sbjct: 522 SMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKP 581
Query: 184 DGGTAKVLLAA-CSNEDQTEQVTTVIRTMDKDIK 216
D T LL C + + + + +D +K
Sbjct: 582 DVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLK 615
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 100/240 (41%), Gaps = 32/240 (13%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGIT------------------ 42
M+H G PD ++ + +D +AGFL +A +V +K GI+
Sbjct: 297 MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGK 356
Query: 43 --------------PTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLN 88
P + + LS TG++ + I ++ + GL D +M++
Sbjct: 357 PEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMID 416
Query: 89 LYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKP 148
Y LG+ K + + ++T ILI + G I E +F+ + ++GLK
Sbjct: 417 GYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKL 476
Query: 149 DVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVI 208
DVVT+ + + Y K + E+ +EM +G PD T +L+ + ++ +I
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 92/192 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G + D +YN L+ YG+ LN + ++M+ GI+P + ++ +L+ + G
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY 528
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + +I++++ + G T ++ + + G F + + M + + D+ T +
Sbjct: 529 IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSA 588
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L++ Y +A ++K LF L GLKPDVV + + I Y + E+ M+ G
Sbjct: 589 LLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Query: 181 CYPDGGTAKVLL 192
P+ T L+
Sbjct: 649 MLPNESTHHALV 660
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 89/180 (49%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G P + IL+ A R G ++DAE+VF +MK G+ + ++ L+ + KT ++K
Sbjct: 438 GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKV 497
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+++++M +G+ D N +++ G + E+++ + + +I
Sbjct: 498 FELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ + G + L+ + +KPDVVT ++ + Y K + + + +F +++D+G PD
Sbjct: 558 FSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPD 617
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 32/204 (15%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 72
++IL+D R +N A + + + GI P+ + LL + + + + M
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHML 263
Query: 73 KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGF-- 130
G L+ VL+ + Y G F K E+L M++ DI + + I++ +AGF
Sbjct: 264 SRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLK 323
Query: 131 ------------------------------IDKMEGLFQLLHSKGLKPDVVTWTSRIGAY 160
+ K E +L+HS L+P++ ++S +
Sbjct: 324 EATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNI 383
Query: 161 SKKKLYVRCLEIFEEMIDSGCYPD 184
+R IF+E+ + G PD
Sbjct: 384 CSTGDMLRASTIFQEIFELGLLPD 407
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 95/194 (48%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GCEPD +Y+IL+++Y +A ++D +F ++ G+ P ++ L+ F ++G
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
++ +++ +M G+ +L+ G+ K E+ M+ I YNI
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I+ A +D LF L KG+KPDVVT+ IG KK +F +M + G
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Query: 181 CYPDGGTAKVLLAA 194
C PD T +L+ A
Sbjct: 556 CTPDDFTYNILIRA 569
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 102/213 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G + D +Y+ L+ G +D + +M I P + + L+ F K G
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + +++ N+M G+ DT NS+++ + + + ++ +M + CE DI TY+I
Sbjct: 331 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSI 390
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN Y +A +D LF+ + SKGL P+ +T+ + + + + E+F+EM+ G
Sbjct: 391 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
P T +LL + + + + M K
Sbjct: 451 VPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 483
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 94/194 (48%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G P+ +YN LV + ++G LN A+ +F++M G+ P++ ++ +LL G ++K
Sbjct: 415 GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 474
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+I +M KS + L + N +++ + + + + + D+ TYN++I
Sbjct: 475 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 534
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ G + + + LF+ + G PD T+ I A+ + +E+ EEM G D
Sbjct: 535 LCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSAD 594
Query: 185 GGTAKVLLAACSNE 198
T K+++ S+
Sbjct: 595 SSTIKMVIDMLSDR 608
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 92/192 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ + Y+I++D+ + G +DA ++F +M+ GI + ++ L+ G
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+L +M + D +++++++ + G+ + +E+ M D TYN
Sbjct: 296 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 355
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ + + + + +F L+ SKG +PD+VT++ I +Y K K + +F E+ G
Sbjct: 356 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 181 CYPDGGTAKVLL 192
P+ T L+
Sbjct: 416 LIPNTITYNTLV 427
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 90/189 (47%)
Query: 4 MGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSK 63
+G EPD +++ LV+ + G +++A A+ + M + P + + L++ G VS+
Sbjct: 134 LGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSE 193
Query: 64 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN 123
++++M + G + D +LN + G ++ ME + +A + Y+I+I+
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVID 253
Query: 124 RYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYP 183
+ G D LF + KG+K DVVT++S IG + ++ EMI P
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 184 DGGTAKVLL 192
D T L+
Sbjct: 314 DVVTFSALI 322
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 94/192 (48%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G +PD +Y +++ ++G A +F M+ I ++ + +++ + K G+
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 260
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ N+M G+K D +S++ G++ ++L M + D+ T++
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ + + G + + + L+ + ++G+ PD +T+ S I + K+ ++F+ M+ G
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 181 CYPDGGTAKVLL 192
C PD T +L+
Sbjct: 381 CEPDIVTYSILI 392
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 89/199 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M M PD + + L++ G +++A + + M G P ++ +L+ K+GN
Sbjct: 166 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 225
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ D+ +M + +K + +++ + G F + ME +AD+ TY+
Sbjct: 226 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 285
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI G D + + + + + PDVVT+++ I + K+ + E++ EMI G
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Query: 181 CYPDGGTAKVLLAACSNED 199
PD T L+ E+
Sbjct: 346 IAPDTITYNSLIDGFCKEN 364
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 93/211 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G E D + I+++ Y R L A +V ++G P + L++ F G
Sbjct: 96 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
VS+ ++++M + + D +++++N G+ + ++ M + D TY
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
++NR ++G LF+ + + +K VV ++ I + K + L +F EM G
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
D T L+ N+ + + ++R M
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 80/192 (41%), Gaps = 8/192 (4%)
Query: 26 LNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCK----SGLKLDTF 81
+NDA +FE M + PT L SA ++T K D++ CK +G++ D +
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVART----KQYDLVLGFCKGMELNGIEHDMY 106
Query: 82 VLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLL 141
+ M+N Y R + VL E D T++ L+N + G + + L +
Sbjct: 107 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 166
Query: 142 HSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQT 201
+PD+VT ++ I K L + + M++ G PD T +L +
Sbjct: 167 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 226
Query: 202 EQVTTVIRTMDK 213
+ R M++
Sbjct: 227 ALALDLFRKMEE 238
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 104/211 (49%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ GCEPDR +Y L+D + +AGFL+ A +++ M+ G++P ++ V+++ K G+
Sbjct: 420 MQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGH 479
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + +M G + N M+ L+ + + ++ M+N + D TY+I
Sbjct: 480 LPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSI 539
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
++ G GF+++ EG+F + K PD + + + K + + ++ M+ +G
Sbjct: 540 VMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAG 599
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
P+ T LL+ + + ++++M
Sbjct: 600 LRPNVPTCNSLLSTFLRVHRMSEAYNLLQSM 630
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 86/180 (47%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
GC+P+ +YN L+ +YGRA +L +A VF M+ G P ++ L+ +K G +
Sbjct: 389 GCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIA 448
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
D+ +M ++GL DTF + ++N G+ G + M C ++ T+NI+I
Sbjct: 449 MDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIAL 508
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ +A + L++ + + G +PD VT++ + +F EM PD
Sbjct: 509 HAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPD 568
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 108/213 (50%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G + +YNIL+ + AG +D + DM + I P + + VL+ +F K G
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + E++ +M G+ DT S+++ + + K +++ +M + C+ +I T+NI
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN Y +A ID LF+ + +G+ D VT+ + I + + E+F+EM+
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
P+ T K+LL + ++E+ + ++K
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 1/208 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC+P+ ++NIL++ Y +A ++D +F M G+ ++ L+ F + G
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
++ +++ +M + + +L+ G+ K E+ +E E DI YNI
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I+ A +D LF L KG+KP V T+ IG KK +F +M + G
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573
Query: 181 CYPDGGTAKVLLAA-CSNEDQTEQVTTV 207
PDG T +L+ A + D T+ V +
Sbjct: 574 HAPDGWTYNILIRAHLGDGDATKSVKLI 601
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 5/222 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M MG +PD + N LV+ +G +A + + M G P ++ +L+ K+G
Sbjct: 184 MVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQ 243
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ ++L +M + +KLD + +++ + G + ME +I TYNI
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNI 303
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI + AG D L + + + + P+VVT++ I ++ K+ E+ +EMI G
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 363
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM-----DKDIKT 217
PD T L+ E+ ++ ++ M D +I+T
Sbjct: 364 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT 405
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/211 (18%), Positives = 98/211 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC+P+ +Y +++ ++G A + M+ I + +++ K G+
Sbjct: 219 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ ++ N+M G+ + N ++ + G++ ++L M ++ T+++
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ + + G + + E L + + +G+ PD +T+TS I + K+ + ++ + M+ G
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
C P+ T +L+ ++ + + R M
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 89/197 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G D +YN L+ + G LN A+ +F++M + P + ++ +LL G
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
K +I ++ KS ++LD + N +++ + ++ + + + TYNI
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I + G + + E LF+ + G PD T+ I A+ + +++ EE+ G
Sbjct: 549 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 608
Query: 181 CYPDGGTAKVLLAACSN 197
D T K+++ S+
Sbjct: 609 FSVDASTIKMVIDMLSD 625
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 98/208 (47%)
Query: 4 MGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSK 63
+G EP+ +++ L++ G +++A + + M +G P + + L++ +G ++
Sbjct: 152 LGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAE 211
Query: 64 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN 123
++++M + G + + +LN+ + GQ E+L ME + + D Y+I+I+
Sbjct: 212 AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 124 RYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYP 183
+ G +D LF + KG+ +++T+ IG + + ++ +MI P
Sbjct: 272 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 331
Query: 184 DGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+ T VL+ + E + + + + M
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEM 359
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 81/191 (42%), Gaps = 8/191 (4%)
Query: 27 NDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSM 86
+DA +F DM PT+ L SA +KT + QM G+ + + L+ M
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 87 LNLYGRLGQ----FGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLH 142
+N + R + F M +++ + E + T++ LIN G + + L +
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKL----GYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 143 SKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTE 202
G KPD++T + + + + ++M++ GC P+ T +L QT
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 203 QVTTVIRTMDK 213
++R M++
Sbjct: 246 LAMELLRKMEE 256
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 97/179 (54%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
Q MG +PD ++NIL+ ++G+AG +V + M++ + T ++ +++ F K G
Sbjct: 312 FQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGR 371
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ K +D+ +M G+K ++ S++N Y + G K++ VL + N D +N
Sbjct: 372 IEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNC 431
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
+IN YGQAG + M+ L+ + + KPD +T+ + I Y+ ++ E+ ++MI S
Sbjct: 432 IINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISS 490
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 98/180 (54%), Gaps = 1/180 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGIT-PTMKSHMVLLSAFSKTG 59
M ++G +YN ++D YG+AG + E+V DM G + P + + ++ ++
Sbjct: 241 MSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGR 300
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
N+ K E ++ G++ D N ++ +G+ G + KM V+ ME TYN
Sbjct: 301 NMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYN 360
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
I+I +G+AG I+KM+ +F+ + +G+KP+ +T+ S + AYSK L V+ + ++++S
Sbjct: 361 IVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNS 420
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 2/209 (0%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
EP +Y L G + A +FE M G+ PT+ + L+S + K+ + K
Sbjct: 141 EPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFS 200
Query: 67 ILNQM-CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
L M S K D F +++ +LG+F ++ ++ M TYN +I+ Y
Sbjct: 201 TLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGY 260
Query: 126 GQAGFIDKMEG-LFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
G+AG ++ME L ++ PDV T S IG+Y + + + G PD
Sbjct: 261 GKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPD 320
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
T +L+ + +++ +V+ M+K
Sbjct: 321 ITTFNILILSFGKAGMYKKMCSVMDFMEK 349
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 108/213 (50%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G PD +Y+ ++D++ R+G DAE + DM I P + + L++A K G
Sbjct: 102 MHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGK 161
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
VS+ E+I M + G+ T NSM++ + + + + +L M + SC D+ T++
Sbjct: 162 VSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFST 221
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN Y +A +D +F +H +G+ + VT+T+ I + + ++ MI SG
Sbjct: 222 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG 281
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
P+ T + +LA+ ++ + + ++ + K
Sbjct: 282 VAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 72
YN ++D + G A+ +F +M GI P + ++ ++ +F ++G + E +L M
Sbjct: 79 YNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMI 138
Query: 73 KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFID 132
+ + D ++++N + G+ + EE+ M TYN +I+ + + ++
Sbjct: 139 ERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLN 198
Query: 133 KMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLL 192
+ + + SK PDVVT+++ I Y K K +EIF EM G + T L+
Sbjct: 199 DAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 258
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 98/211 (46%), Gaps = 4/211 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC PD ++ L++ G + A A+ + M G P + +++ K G+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
++L++M ++ +K + N++++ + G + + T M + D+ TY+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I+ + ++G E L + + + + PDVVT+++ I A K+ EI+ +M+ G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+P T ++ +D+ ++ +M
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSM 207
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 1/215 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ C+PD +YN ++ YGR G +AE +F +++ G P ++ LL AF++ N
Sbjct: 323 MEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERN 382
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCE-ADISTYN 119
K +++ QM K G D N+++++YG+ GQ ++ M+ S D TY
Sbjct: 383 TEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYT 442
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
+LI+ G+A + L + G+KP + T+++ I Y+K + F M+ S
Sbjct: 443 VLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRS 502
Query: 180 GCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
G PD V+L ++T + + R M D
Sbjct: 503 GTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISD 537
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 101/201 (50%), Gaps = 2/201 (0%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSK--CEDILNQ 70
YN ++ Y R+G + A+ + + M++ G P + S L++A K+G ++ ++L+
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 71 MCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGF 130
+ SGL+ D N++L+ R +V ME C+ D+ TYN +I+ YG+ G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 131 IDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKV 190
+ E LF L KG PD VT+ S + A+++++ + E++++M G D T
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 191 LLAACSNEDQTEQVTTVIRTM 211
++ + Q + + + M
Sbjct: 408 IIHMYGKQGQLDLALQLYKDM 428
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 102/212 (48%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
++ G EPD +YN L+ Y R + + + M+ +G+ P + ++ L+SAF K
Sbjct: 953 IKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKC 1012
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + E + ++ GLKLD ++M+ + G K E++L +M+N E ++T ++
Sbjct: 1013 LEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHL 1072
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L+ Y +G + E + L ++ + ++S I AY + K Y +E EM G
Sbjct: 1073 LMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEG 1132
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMD 212
PD + A S + +V +++ ++
Sbjct: 1133 LEPDHRIWTCFVRAASFSKEKIEVMLLLKALE 1164
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 1/212 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
+++ G PD +YN L+ A R L+ A VFEDM+ P + ++ ++S + + G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
++ E + ++ G D NS+L + R K++EV M+ D TYN
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 121 LINRYGQAGFIDKMEGLFQLLHS-KGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
+I+ YG+ G +D L++ + G PD +T+T I + K V + EM+D
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDV 467
Query: 180 GCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
G P T L+ + + E+ M
Sbjct: 468 GIKPTLQTYSALICGYAKAGKREEAEDTFSCM 499
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%), Gaps = 3/214 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFL--NDAEAVFEDMKRVGITPTMKSHMVLLSAFSKT 58
M+ GC PD S+N L++A ++G L N A + + ++ G+ P ++ LLSA S+
Sbjct: 251 MRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRD 310
Query: 59 GNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTY 118
N+ + M + D + N+M+++YGR G + E + +E D TY
Sbjct: 311 SNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTY 370
Query: 119 NILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID 178
N L+ + + +K++ ++Q + G D +T+ + I Y K+ L+++++M
Sbjct: 371 NSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKG 430
Query: 179 -SGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
SG PD T VL+ + ++T + ++ M
Sbjct: 431 LSGRNPDAITYTVLIDSLGKANRTVEAAALMSEM 464
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 99/211 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
++ G PD ++N L+ AY + G A A+F M R G +PT++S +LL A G
Sbjct: 778 LRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGR 837
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + ++ ++ G K+ + ML+ + R G +++++ + M+ I Y +
Sbjct: 838 LEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRM 897
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I + + E + + K ++ W S + Y+ + Y + +++++ + ++G
Sbjct: 898 MIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETG 957
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
PD T L+ + + E+ +++ M
Sbjct: 958 LEPDETTYNTLIIMYCRDRRPEEGYLLMQQM 988
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 45/220 (20%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G P S NIL+ A G L + V E+++ +G + S +++L AF++ GN
Sbjct: 813 MMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGN 872
Query: 61 VSKCEDILNQM-------------------CK----------------SGLKLDTFVLNS 85
+ + + I + M CK + K++ + NS
Sbjct: 873 IFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNS 932
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILI-----NRYGQAGFIDKMEGLFQL 140
ML +Y + + K +V ++ E D +TYN LI +R + G++ L Q
Sbjct: 933 MLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYL-----LMQQ 987
Query: 141 LHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+ + GL P + T+ S I A+ K+K + ++FEE++ G
Sbjct: 988 MRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKG 1027
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 6/168 (3%)
Query: 50 VLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKME----EVLTV 105
++ +S++G SK +++++ M + G D N+++N RL G E+L +
Sbjct: 230 AMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLIN--ARLKSGGLTPNLAVELLDM 287
Query: 106 MENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKL 165
+ N D TYN L++ + +D +F+ + + +PD+ T+ + I Y + L
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 166 YVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
+F E+ G +PD T LL A + E TE+V V + M K
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQK 395
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 82 VLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN-RYGQAGFIDKME-GLFQ 139
V N+M+ +Y R G+F K +E++ M C D+ ++N LIN R G + L
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLD 286
Query: 140 LLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLA 193
++ + GL+PD +T+ + + A S+ +++FE+M C PD T +++
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMIS 340
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 1/153 (0%)
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMEN-GSCEADISTY 118
+ ++ + + + SG + V SM+ +Y +LG +V+ E G A Y
Sbjct: 696 HYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMY 755
Query: 119 NILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID 178
+I YG+ K E + L G PD+ TW S + AY++ Y R IF M+
Sbjct: 756 TDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMR 815
Query: 179 SGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
G P + +LL A + + E++ V+ +
Sbjct: 816 DGPSPTVESINILLHALCVDGRLEELYVVVEEL 848
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
Query: 85 SMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSK 144
++L + GR Q E+ T E + + YN ++ Y ++G K + L + +
Sbjct: 196 AILGVLGRWNQESLAVEIFTRAE-PTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQR 254
Query: 145 GLKPDVVTWTSRIGAYSKKKLYVRCL--EIFEEMIDSGCYPDGGTAKVLLAACSNEDQTE 202
G PD++++ + I A K L E+ + + +SG PD T LL+ACS + +
Sbjct: 255 GCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLD 314
Query: 203 QVTTVIRTMD 212
V M+
Sbjct: 315 GAVKVFEDME 324
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 100/188 (53%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
GC P+ YN ++ Y + G + +A VF+++K G PT+++ +++ F K G+
Sbjct: 235 GCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVAS 294
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ +L+++ + GL++ + LN++++ R G E + + C+ D++TYNILINR
Sbjct: 295 DRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINR 354
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ G + G KGL P+ +++ I AY K K Y ++ +M + GC PD
Sbjct: 355 LCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPD 414
Query: 185 GGTAKVLL 192
T +L+
Sbjct: 415 IVTYGILI 422
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 94/192 (48%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC+PD +Y IL+ +G ++DA + + G++P + +L+S KTG
Sbjct: 406 MAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGR 465
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + ++M + D +V ++++ + R G F + +V ++ + D+ +N
Sbjct: 466 FLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNA 525
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I + ++G +D+ ++ + L PD T+++ I Y K++ ++IF M +
Sbjct: 526 MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNK 585
Query: 181 CYPDGGTAKVLL 192
C P+ T L+
Sbjct: 586 CKPNVVTYTSLI 597
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 90/186 (48%), Gaps = 1/186 (0%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
PD Y L+D + R+G ++A VF G+ + H ++ F ++G + +
Sbjct: 483 PDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALAC 542
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
+N+M + L D F +++++ Y + ++ ME C+ ++ TY LIN +
Sbjct: 543 MNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCC 602
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYV-RCLEIFEEMIDSGCYPDGG 186
G E F+ + + L P+VVT+T+ I + +K+ + + + +E M+ + C P+
Sbjct: 603 QGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEV 662
Query: 187 TAKVLL 192
T LL
Sbjct: 663 TFNCLL 668
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G PD A YN+L+ + G A+ +F +M I P + L+ F ++G+ +
Sbjct: 445 GVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEA 504
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ + + G+K+D N+M+ + R G + + M D TY+ +I+
Sbjct: 505 RKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDG 564
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
Y + + +F+ + KP+VVT+TS I + + + E F+EM P+
Sbjct: 565 YVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPN 624
Query: 185 GGTAKVLLAACSNEDQT 201
T L+ + + E T
Sbjct: 625 VVTYTTLIRSLAKESST 641
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 90/210 (42%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G P+ SY L+ AY ++ + A + M G P + ++ +L+ +G++
Sbjct: 375 GLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDA 434
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
++ ++ G+ D + N +++ + G+F + + + M + + D Y LI+
Sbjct: 435 VNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDG 494
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ ++G D+ +F L KG+K DVV + I + + + L M + PD
Sbjct: 495 FIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPD 554
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
T ++ + + R M+K+
Sbjct: 555 KFTYSTIIDGYVKQQDMATAIKIFRYMEKN 584
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 71/187 (37%), Gaps = 35/187 (18%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C+PD A+YNIL++ + G A ++ + G+ P S+ L+ A+ K+
Sbjct: 341 CKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIAS 400
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+L QM + G C+ DI TY ILI+
Sbjct: 401 KLLLQMAERG-----------------------------------CKPDIVTYGILIHGL 425
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
+G +D + L +G+ PD + + K ++ +F EM+D PD
Sbjct: 426 VVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDA 485
Query: 186 GTAKVLL 192
L+
Sbjct: 486 YVYATLI 492
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 92/180 (51%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M MG +PD Y ++D+ + G +N A ++F+ M+ GI P + + L++ +G
Sbjct: 168 MVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGR 227
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ +L M K +K D N++++ + + G+F EE+ M S +I TY
Sbjct: 228 WRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN + G +D+ +F L+ +KG PDVV +TS I + K K ++IF EM G
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 95/213 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M++ G PD Y LV+ +G DA+++ M + I P + + L+ AF K G
Sbjct: 203 MENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGK 262
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
E++ N+M + + + F S++N + G + ++ +ME C D+ Y
Sbjct: 263 FLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTS 322
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN + + +D +F + KGL + +T+T+ I + + E+F M+ G
Sbjct: 323 LINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG 382
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
P+ T VLL + ++ + M K
Sbjct: 383 VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQK 415
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 88/184 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M +G EPD ++ L++ + + +A ++ M +GI P + + ++ + K G+
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGH 192
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V+ + +QM G++ D + S++N G++ + +L M + D+ T+N
Sbjct: 193 VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNA 252
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ + + G E L+ + + P++ T+TS I + + ++F M G
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG 312
Query: 181 CYPD 184
C+PD
Sbjct: 313 CFPD 316
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 98/213 (46%), Gaps = 3/213 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
+Q MG D + N+L++ + ++ A + M ++G P + + L++ F
Sbjct: 98 LQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNR 157
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + ++NQM + G+K D + ++++ + G + MEN D+ Y
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTS 217
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L+N +G + L + + + +KPDV+T+ + I A+ K+ ++ E++ EMI
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277
Query: 181 CYPDGGTAKVLLAACSNE---DQTEQVTTVIRT 210
P+ T L+ E D+ Q+ ++ T
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMET 310
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 86/186 (46%), Gaps = 9/186 (4%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G + +Y L+ +G+ G N A+ VF M G+ P ++++ VLL G
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK 402
Query: 61 VSKCEDILNQMCK---SGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMEN-GSCEADIS 116
V K I M K G+ + + N +L+ L GK+E+ L V E+ E DI
Sbjct: 403 VKKALMIFEDMQKREMDGVAPNIWTYNVLLH---GLCYNGKLEKALMVFEDMRKREMDIG 459
Query: 117 TYNILINRYG--QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFE 174
I G +AG + LF L SKG+KP+VVT+T+ I ++ L +F
Sbjct: 460 IITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFR 519
Query: 175 EMIDSG 180
+M + G
Sbjct: 520 KMKEDG 525
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 78/188 (41%)
Query: 26 LNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNS 85
N+A +F M P++ LL+ +K ++ + + G+ D + N
Sbjct: 53 FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
++N + + Q L M E DI T+ LIN + +++ + + G
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVT 205
+KPDVV +T+ I + K L +F++M + G PD L+ N +
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 206 TVIRTMDK 213
+++R M K
Sbjct: 233 SLLRGMTK 240
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 104/213 (48%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G + D Y L+ + AG +D + DM + ITP + + L+ F K G
Sbjct: 273 MEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGK 332
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + E++ +M + G+ DT S+++ + + Q K +L +M + C +I T+NI
Sbjct: 333 LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN Y +A ID LF+ + +G+ D VT+ + I + + E+F+EM+
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
PD + K+LL + + E+ + ++K
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK 485
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC P+ ++NIL++ Y +A ++D +F M G+ ++ L+ F + G
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ +++ +M ++ D +L+ G+ K E+ +E E DI YNI
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I+ A +D LF L KG+KPDV T+ IG KK +F +M + G
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
P+G T +L+ A E + +I + +
Sbjct: 558 HSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M MG +P + N LV+ G ++DA + + M G P ++ +L K+G
Sbjct: 168 MVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ ++L +M + +KLD + +++ + G + ME +ADI Y
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI + AG D L + + + + PDVV +++ I + K+ E+ +EMI G
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
PD T L+ E+Q ++ ++ M
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 86/181 (47%)
Query: 4 MGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSK 63
+G EPD +++ L++ G +++A + + M +G PT+ + L++ G VS
Sbjct: 136 LGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSD 195
Query: 64 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN 123
++++M ++G + + +L + + GQ E+L ME + D Y+I+I+
Sbjct: 196 AVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIID 255
Query: 124 RYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYP 183
+ G +D LF + KG K D++ +T+ I + + ++ +MI P
Sbjct: 256 GLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITP 315
Query: 184 D 184
D
Sbjct: 316 D 316
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 89/197 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G D +YN L+ + G L A+ +F++M + P + S+ +LL G
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
K +I ++ KS ++LD + N +++ + ++ + + D+ TYNI
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I + G + + + LF+ + G P+ T+ I A+ + + ++ EE+ G
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592
Query: 181 CYPDGGTAKVLLAACSN 197
D T K+++ S+
Sbjct: 593 FSVDASTVKMVVDMLSD 609
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 88/192 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G +P+ +Y ++ ++G A + M+ I + +++ K G+
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ ++ N+M G K D + +++ + G++ ++L M D+ ++
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ + + G + + E L + + +G+ PD VT+TS I + K+ + + + M+ G
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 181 CYPDGGTAKVLL 192
C P+ T +L+
Sbjct: 383 CGPNIRTFNILI 394
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 109/222 (49%), Gaps = 5/222 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M++ G P+ +Y+ L+ G +DA + DM I P + + L+ AF K G
Sbjct: 279 MENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGK 338
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ K E + +M K + + F +S++N + L + G+ +++L +M C ++ TYN
Sbjct: 339 LVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNT 398
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN + +A +DK LF+ + +GL + VT+T+ I + + + +F++M+ G
Sbjct: 399 LINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 458
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIR-----TMDKDIKT 217
+P+ T +LL + + V TM+ DI T
Sbjct: 459 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 500
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 97/211 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ E + Y+ ++D+ + +DA +F +M+ G+ P + ++ L+S G
Sbjct: 244 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGR 303
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S +L+ M + + + +++++ + + G+ K E++ M S + +I TY+
Sbjct: 304 WSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSS 363
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN + + + + + +L+ K P+VVT+ + I + K K + +E+F EM G
Sbjct: 364 LINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRG 423
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+ T L+ + V + M
Sbjct: 424 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 454
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M +G EPD + N L++ + ++DA A+ + M +G P + L+
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S+ ++++M + G + D +++N + G +L ME EA++ Y+
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I+ + D LF + +KG++P+V+T++S I + + +MI+
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 181 CYPDGGTAKVLLAA 194
P+ T L+ A
Sbjct: 319 INPNLVTFSALIDA 332
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 97/211 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ +G + +YNIL++ + R L+ A A+ M ++G P + + LL+ F
Sbjct: 104 MEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNR 163
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+S +++QM + G K DT ++++ + + ++ M C+ D+ TY
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
++N + G D L + + ++ +VV +++ I + K + L +F EM + G
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
P+ T L++ N + + ++ M
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDM 314
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 64/133 (48%), Gaps = 1/133 (0%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C P+ +YN L++ + +A ++ +F +M + G+ ++ L+ F + + +
Sbjct: 389 CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 448
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+ QM G+ + N +L+ + G+ K V ++ + E DI TYNI+I
Sbjct: 449 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 508
Query: 126 GQAGFIDKMEGLF 138
+AG KM G++
Sbjct: 509 CKAGKW-KMGGIY 520
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 73/151 (48%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
+P+ +Y+ L++ + L +A+ + E M R P + ++ L++ F K V K +
Sbjct: 355 DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGME 414
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+ +M + GL +T ++++ + + + V M + +I TYNIL++
Sbjct: 415 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 474
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRI 157
+ G + K +F+ L ++PD+ T+ I
Sbjct: 475 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 505
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 73/187 (39%)
Query: 26 LNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNS 85
L+DA +F M + P++ LLSA +K +M G+ + + N
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
++N + R + +L M E DI T N L+N + I L + G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVT 205
KPD VT+T+ I + + + M+ GC PD T ++ T+
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 206 TVIRTMD 212
++ M+
Sbjct: 239 NLLNKME 245
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G P A+Y L++A G+A A +F+++K + + + V++ F K G
Sbjct: 435 MDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGK 494
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+S+ D+ N+M G D + N++++ + G + +L ME C ADI+++NI
Sbjct: 495 LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNI 554
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
++N + + G + +F+ + G+KPD VT+ + +G ++ ++ + EM D G
Sbjct: 555 ILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKG 614
Query: 181 CYPDGGTAKVLLAACSNEDQ 200
D T +L A N D
Sbjct: 615 FEYDAITYSSILDAVGNVDH 634
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 98/246 (39%), Gaps = 36/246 (14%)
Query: 6 CEPDRASYNILVDAY---GR--------------------------------AGFLNDAE 30
C PD +Y+ L+ +Y GR G + A
Sbjct: 229 CFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKAL 288
Query: 31 AVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLY 90
+FE+MKR G +PT+ ++ L+ K G V + M + GL D LN+++N+
Sbjct: 289 DLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNIL 348
Query: 91 GRLGQFGKMEEVLTVMENGSCEADISTYNILINR-YGQAGFIDKMEGLFQLLHSKGLKPD 149
G++G+ ++ V + M C + +YN +I + + ++ F + + + P
Sbjct: 349 GKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPS 408
Query: 150 VVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIR 209
T++ I Y K + L + EEM + G P L+ A + E + +
Sbjct: 409 EFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFK 468
Query: 210 TMDKDI 215
+ ++
Sbjct: 469 ELKENF 474
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 102/242 (42%), Gaps = 36/242 (14%)
Query: 6 CEPDRASYNILVDA-YGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
C P SYN ++ A + +++ + F+ MK ++P+ ++ +L+ + KT V K
Sbjct: 369 CTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKA 428
Query: 65 EDILNQMCKSGL-----------------------------------KLDTFVLNSMLNL 89
+L +M + G + + V M+
Sbjct: 429 LLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKH 488
Query: 90 YGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPD 149
+G+ G+ + ++ M+N D+ YN L++ +AG I++ L + + G + D
Sbjct: 489 FGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRAD 548
Query: 150 VVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIR 209
+ + + +++ + R +E+FE + SG PDG T LL ++ E+ ++R
Sbjct: 549 INSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMR 608
Query: 210 TM 211
M
Sbjct: 609 EM 610
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 1/177 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ GC P +Y L+ G+AG +++A ++DM R G+TP + L++ K G
Sbjct: 294 MKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGR 353
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLN-LYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
V + ++ ++M N+++ L+ ++ M+ S TY+
Sbjct: 354 VEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYS 413
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
ILI+ Y + ++K L + + KG P + S I A K K Y E+F+E+
Sbjct: 414 ILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKEL 470
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 3/177 (1%)
Query: 39 VGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGK 98
V ++P + S +V A + VSK + Q K + NS++ + + GQ K
Sbjct: 158 VSVSPAVLSELV--KALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEK 215
Query: 99 MEEVLTVMEN-GSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRI 157
+ EV T M N G C D TY+ LI+ Y + G D LF + ++P +T+ +
Sbjct: 216 VHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLL 275
Query: 158 GAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
G Y K + L++FEEM +GC P T L+ + ++ + M +D
Sbjct: 276 GIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRD 332
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 2/196 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ C+PD +Y+ L++A+GRAG A + +DM R I P+ ++ L++A +GN
Sbjct: 169 MQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGN 228
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ ++ +M +G+ D N +L+ Y Q+ K +M+ D +T+NI
Sbjct: 229 WREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNI 288
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGL--KPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID 178
+I + G + LF + K +PDVVT+TS + YS K C +FE M+
Sbjct: 289 IIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVA 348
Query: 179 SGCYPDGGTAKVLLAA 194
G P+ + L+ A
Sbjct: 349 EGLKPNIVSYNALMGA 364
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 2/210 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDM--KRVGITPTMKSHMVLLSAFSKT 58
M+ PD ++NI++ + G + A +F M KR P + + ++ +S
Sbjct: 274 MKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVK 333
Query: 59 GNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTY 118
G + C + M GLK + N+++ Y G G VL ++ D+ +Y
Sbjct: 334 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSY 393
Query: 119 NILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID 178
L+N YG++ K + +F ++ + KP+VVT+ + I AY +EIF +M
Sbjct: 394 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 453
Query: 179 SGCYPDGGTAKVLLAACSNEDQTEQVTTVI 208
G P+ + LLAACS + V TV+
Sbjct: 454 DGIKPNVVSVCTLLAACSRSKKKVNVDTVL 483
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C PD ++ ++ Y G + + AVFE M G+ P + S+ L+ A++ G
Sbjct: 316 CRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTAL 375
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+L + ++G+ D +LN YGR Q GK +EV +M + ++ TYN LI+ Y
Sbjct: 376 SVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAY 435
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
G GF+ + +F+ + G+KP+VV+ + + A S+ K V + G +
Sbjct: 436 GSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNT 495
Query: 186 GTAKVLLAACSNEDQTEQVTTVIRTMDK 213
+ + N + E+ + ++M K
Sbjct: 496 AAYNSAIGSYINAAELEKAIALYQSMRK 523
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 107/245 (43%), Gaps = 36/245 (14%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
+P+ +YN L+DAYG GFL +A +F M++ GI P + S LL+A S++ +
Sbjct: 422 KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDT 481
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN--- 123
+L+ G+ L+T NS + Y + K + M +AD T+ ILI+
Sbjct: 482 VLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSC 541
Query: 124 --------------------------------RYGQAGFIDKMEGLFQLLHSKGLKPDVV 151
Y + G + + E +F + G +PDV+
Sbjct: 542 RMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVI 601
Query: 152 TWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+TS + AY+ + + + E+F EM +G PD L+ A + Q V ++ M
Sbjct: 602 AYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLM 661
Query: 212 -DKDI 215
+K+I
Sbjct: 662 REKEI 666
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 2/216 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G PD ++NI++ AY + A + FE MK + P + +++ SK G
Sbjct: 239 MTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQ 298
Query: 61 VSKCEDILNQM--CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTY 118
S+ D+ N M ++ + D S+++LY G+ V M + +I +Y
Sbjct: 299 SSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY 358
Query: 119 NILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID 178
N L+ Y G + + G+ PDVV++T + +Y + + + E+F M
Sbjct: 359 NALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK 418
Query: 179 SGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
P+ T L+ A + + + R M++D
Sbjct: 419 ERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQD 454
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 96/211 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
++ G PD SY L+++YGR+ A+ VF M++ P + ++ L+ A+ G
Sbjct: 381 IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGF 440
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+++ +I QM + G+K + + ++L R + ++ VL+ ++ + + YN
Sbjct: 441 LAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNS 500
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
I Y A ++K L+Q + K +K D VT+T I + Y + +EM D
Sbjct: 501 AIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLS 560
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+L A S + Q + ++ M
Sbjct: 561 IPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 591
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 92/201 (45%), Gaps = 2/201 (0%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 72
YN+++ + R +++ A +F +M++ P +++ L++A + G ++++ M
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 73 KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFID 132
++ + N+++N G G + + EV M + D+ T+NI+++ Y
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 133 KMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID--SGCYPDGGTAKV 190
K F+L+ ++PD T+ I SK + L++F M + + C PD T
Sbjct: 266 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 325
Query: 191 LLAACSNEDQTEQVTTVIRTM 211
++ S + + E V M
Sbjct: 326 IMHLYSVKGEIENCRAVFEAM 346
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ + D ++ IL+ R +A + ++M+ + I T + + +L A+SK G
Sbjct: 521 MRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQ 580
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V++ E I NQM +G + D SML+ Y ++GK E+ ME E D +
Sbjct: 581 VTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSA 640
Query: 121 LINRYGQAGFIDKMEGLFQLLHSK 144
L+ + + G + L L+ K
Sbjct: 641 LMRAFNKGGQPSNVFVLMDLMREK 664
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 1/167 (0%)
Query: 46 KSHMVLLSAFSKTGNVSKCEDILNQM-CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLT 104
K+ VL+ S+ G + C ++ M + + N M+ L+ R + +
Sbjct: 108 KNFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFF 167
Query: 105 VMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKK 164
M+ SC+ D TY+ LIN +G+AG L + + P T+ + I A
Sbjct: 168 EMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSG 227
Query: 165 LYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+ LE+ ++M D+G PD T ++L+A + Q + + M
Sbjct: 228 NWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELM 274
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 85/183 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ GCEPD +Y ++ AY + A +F +M+ GI P + L+ AF+K G
Sbjct: 591 MKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQ 650
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S +++ M + + V + + L ++ + +++ +M+ I N
Sbjct: 651 PSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQ 710
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+++ +G++G ++ M LF + + G+ ++ T+ + + + +E+ E M +G
Sbjct: 711 MLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAG 770
Query: 181 CYP 183
P
Sbjct: 771 IQP 773
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 2/196 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ C+PD +Y+ L++A+GRAG A + +DM R I P+ ++ L++A +GN
Sbjct: 37 MQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGN 96
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ ++ +M +G+ D N +L+ Y Q+ K +M+ D +T+NI
Sbjct: 97 WREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNI 156
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGL--KPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID 178
+I + G + LF + K +PDVVT+TS + YS K C +FE M+
Sbjct: 157 IIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVA 216
Query: 179 SGCYPDGGTAKVLLAA 194
G P+ + L+ A
Sbjct: 217 EGLKPNIVSYNALMGA 232
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 2/210 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDM--KRVGITPTMKSHMVLLSAFSKT 58
M+ PD ++NI++ + G + A +F M KR P + + ++ +S
Sbjct: 142 MKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVK 201
Query: 59 GNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTY 118
G + C + M GLK + N+++ Y G G VL ++ D+ +Y
Sbjct: 202 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSY 261
Query: 119 NILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID 178
L+N YG++ K + +F ++ + KP+VVT+ + I AY +EIF +M
Sbjct: 262 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 321
Query: 179 SGCYPDGGTAKVLLAACSNEDQTEQVTTVI 208
G P+ + LLAACS + V TV+
Sbjct: 322 DGIKPNVVSVCTLLAACSRSKKKVNVDTVL 351
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C PD ++ ++ Y G + + AVFE M G+ P + S+ L+ A++ G
Sbjct: 184 CRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTAL 243
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+L + ++G+ D +LN YGR Q GK +EV +M + ++ TYN LI+ Y
Sbjct: 244 SVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAY 303
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
G GF+ + +F+ + G+KP+VV+ + + A S+ K V + G +
Sbjct: 304 GSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNT 363
Query: 186 GTAKVLLAACSNEDQTEQVTTVIRTMDK 213
+ + N + E+ + ++M K
Sbjct: 364 AAYNSAIGSYINAAELEKAIALYQSMRK 391
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 107/245 (43%), Gaps = 36/245 (14%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
+P+ +YN L+DAYG GFL +A +F M++ GI P + S LL+A S++ +
Sbjct: 290 KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDT 349
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN--- 123
+L+ G+ L+T NS + Y + K + M +AD T+ ILI+
Sbjct: 350 VLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSC 409
Query: 124 --------------------------------RYGQAGFIDKMEGLFQLLHSKGLKPDVV 151
Y + G + + E +F + G +PDV+
Sbjct: 410 RMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVI 469
Query: 152 TWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+TS + AY+ + + + E+F EM +G PD L+ A + Q V ++ M
Sbjct: 470 AYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLM 529
Query: 212 -DKDI 215
+K+I
Sbjct: 530 REKEI 534
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 2/216 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G PD ++NI++ AY + A + FE MK + P + +++ SK G
Sbjct: 107 MTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQ 166
Query: 61 VSKCEDILNQM--CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTY 118
S+ D+ N M ++ + D S+++LY G+ V M + +I +Y
Sbjct: 167 SSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY 226
Query: 119 NILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID 178
N L+ Y G + + G+ PDVV++T + +Y + + + E+F M
Sbjct: 227 NALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK 286
Query: 179 SGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
P+ T L+ A + + + R M++D
Sbjct: 287 ERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQD 322
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 96/211 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
++ G PD SY L+++YGR+ A+ VF M++ P + ++ L+ A+ G
Sbjct: 249 IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGF 308
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+++ +I QM + G+K + + ++L R + ++ VL+ ++ + + YN
Sbjct: 309 LAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNS 368
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
I Y A ++K L+Q + K +K D VT+T I + Y + +EM D
Sbjct: 369 AIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLS 428
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+L A S + Q + ++ M
Sbjct: 429 IPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 459
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 92/201 (45%), Gaps = 2/201 (0%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 72
YN+++ + R +++ A +F +M++ P +++ L++A + G ++++ M
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 73 KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFID 132
++ + N+++N G G + + EV M + D+ T+NI+++ Y
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 133 KMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID--SGCYPDGGTAKV 190
K F+L+ ++PD T+ I SK + L++F M + + C PD T
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 191 LLAACSNEDQTEQVTTVIRTM 211
++ S + + E V M
Sbjct: 194 IMHLYSVKGEIENCRAVFEAM 214
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ + D ++ IL+ R +A + ++M+ + I T + + +L A+SK G
Sbjct: 389 MRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQ 448
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V++ E I NQM +G + D SML+ Y ++GK E+ ME E D +
Sbjct: 449 VTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSA 508
Query: 121 LINRYGQAGFIDKMEGLFQLLHSK 144
L+ + + G + L L+ K
Sbjct: 509 LMRAFNKGGQPSNVFVLMDLMREK 532
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 85/184 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ GCEPD +Y ++ AY + A +F +M+ GI P + L+ AF+K G
Sbjct: 459 MKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQ 518
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S +++ M + + V + + L ++ + +++ +M+ I N
Sbjct: 519 PSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQ 578
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+++ +G++G ++ M LF + + G+ ++ T+ + + + +E+ E M +G
Sbjct: 579 MLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAG 638
Query: 181 CYPD 184
P
Sbjct: 639 IQPS 642
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%)
Query: 82 VLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLL 141
+ N M+ L+ R + + M+ SC+ D TY+ LIN +G+AG L +
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 142 HSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQT 201
+ P T+ + I A + LE+ ++M D+G PD T ++L+A + Q
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 202 EQVTTVIRTM 211
+ + M
Sbjct: 133 SKALSYFELM 142
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C PD +YN L++ + +A + D +F DM R G+ ++ L+ F + + +
Sbjct: 376 CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQ 435
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+ QM G+ + N++L+ + G+ K V ++ E DI TYNI+
Sbjct: 436 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGM 495
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
+AG ++ LF L KG+KPDV+ + + I + KK L +F +M + G PD
Sbjct: 496 CKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDS 555
Query: 186 GTAKVLLAACSNEDQTEQVTTVIRTM 211
GT L+ A + +I+ M
Sbjct: 556 GTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 104/214 (48%), Gaps = 2/214 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M + G PD +Y+ L+ G +DA + DM I P + + L+ AF+K G
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + E + ++M + + + NS++N + + + +++ T+M + C D+ TYN
Sbjct: 326 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNT 385
Query: 121 LINRYGQA-GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
LIN + +A +D ME LF+ + +GL + VT+T+ I + + +F++M+
Sbjct: 386 LINGFCKAKKVVDGME-LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD 444
Query: 180 GCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
G +P+ T LL + E+ V + K
Sbjct: 445 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQK 478
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 100/214 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ E D Y+ ++D+ + ++DA +F +M GI P + ++ L+S G
Sbjct: 231 MEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 290
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S +L+ M + + + NS+++ + + G+ + E++ M S + +I TYN
Sbjct: 291 WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNS 350
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN + +D+ + +F L+ SK PDVVT+ + I + K K V +E+F +M G
Sbjct: 351 LINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRG 410
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
+ T L+ + V + M D
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD 444
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 102/215 (47%), Gaps = 3/215 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M MG +PD ++ LV + ++A A+ E M G P + ++ +++ K G
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
++LN+M K ++ D + +++++ + + T M+N D+ TY+
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ G L + + + P+VVT+ S I A++K+ + ++F+EMI
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 181 CYPDGGTAKVLLAA-CSNE--DQTEQVTTVIRTMD 212
P+ T L+ C ++ D+ +Q+ T++ + D
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 87/184 (47%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P+ ++N L+DA+ + G L +AE +F++M + I P + ++ L++ F + + + I
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
M D N+++N + + + E+ M + TY LI+ + Q
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
A D + +F+ + S G+ P+++T+ + + K + + +FE + S PD T
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYT 487
Query: 188 AKVL 191
++
Sbjct: 488 YNIM 491
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 98/222 (44%), Gaps = 5/222 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M +G P + N L++ + +++A A+ + M +G P + L+ +
Sbjct: 126 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 185
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S+ ++ +M G + D +++N + G+ +L ME G EAD+ Y+
Sbjct: 186 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYST 245
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I+ + +D LF + +KG++PDV T++S I + + +M++
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVI-----RTMDKDIKT 217
P+ T L+ A + E + + + R++D +I T
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVT 347
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 57/125 (45%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G P+ +YN L+D + G L A VFE +++ + P + ++ ++ K G V
Sbjct: 445 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDG 504
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
D+ + G+K D N+M++ + + G + + M+ D TYN LI
Sbjct: 505 WDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Query: 125 YGQAG 129
+ + G
Sbjct: 565 HLRDG 569
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 74/188 (39%)
Query: 26 LNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNS 85
L++A +F +M + P++ LLSA +K +M G+ + + N
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
M+N R Q +L M I T N L+N + I + L + G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVT 205
+PD VT+T+ + + + + E M+ GC PD T ++ + +
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 206 TVIRTMDK 213
++ M+K
Sbjct: 226 NLLNKMEK 233
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 98/192 (51%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC P+ +Y L+D + G L+ A + +M ++G+ P + ++ +++ K+GN
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 506
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + ++ + +GL DT ++++ Y + G+ K +E+L M + I T+N+
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 566
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L+N + G ++ E L + +KG+ P+ T+ S + Y + I+++M G
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Query: 181 CYPDGGTAKVLL 192
PDG T + L+
Sbjct: 627 VGPDGKTYENLV 638
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 101/207 (48%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G EPD ++ L++ Y +AG + DA V M + G +P + ++ L+ K G++
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
++L++M K GL+ + F NS++N + G + +++ E AD TY L++
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
Y ++G +DK + + + + KGL+P +VT+ + + + ++ M+ G P+
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTM 211
T L+ + + T + + M
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDM 622
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G PD SY+ +V+ Y R G L+ + E MKR G+ P + ++ +
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+++ E+ ++M + G+ DT V ++++ + + G + M + D+ TY
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I+ + Q G + + LF + KGL+PD VT+T I Y K + MI +G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
C P+ T L+ E + ++ M K
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 90/182 (49%)
Query: 11 ASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQ 70
ASYNI++ + G + +A + M+ G TP + S+ +++ + + G + K ++
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 71 MCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGF 130
M + GLK ++++ S++ L R+ + + EE + M D Y LI+ + + G
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 131 IDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKV 190
I F +HS+ + PDV+T+T+ I + + V ++F EM G PD T
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 191 LL 192
L+
Sbjct: 427 LI 428
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 91/211 (43%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G PD Y L+D + + G + A F +M ITP + ++ ++S F + G+
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + + ++M GL+ D+ ++N Y + G V M C ++ TY
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ + G +D L + GL+P++ T+ S + K +++ E +G
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
D T L+ A + ++ +++ M
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G D +Y L+DAY ++G ++ A+ + ++M G+ PT+ + VL++ F G +
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 580
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
E +LN M G+ + NS++ Y + M + D TY L+
Sbjct: 581 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ +A + + LFQ + KG V T++ I + K+K ++ E+F++M G D
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 85/208 (40%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G +P+ Y ++ R L +AE F +M R GI P + L+ F K G+
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ +M + D ++++ + ++G + ++ M E D T+
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN Y +AG + + + G P+VVT+T+ I K+ E+ EM G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVI 208
P+ T ++ E+ ++
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 76/175 (43%), Gaps = 1/175 (0%)
Query: 29 AEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLN 88
A VF + VG+ + S+ +++ + G + + +L M G D ++++N
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 89 LYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKP 148
Y R G+ K+ +++ VM+ + + Y +I + + + E F + +G+ P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 149 DVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAA-CSNEDQTE 202
D V +T+ I + K+ + F EM PD T +++ C D E
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 98/192 (51%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC P+ +Y L+D + G L+ A + +M ++G+ P + ++ +++ K+GN
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 506
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + ++ + +GL DT ++++ Y + G+ K +E+L M + I T+N+
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 566
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L+N + G ++ E L + +KG+ P+ T+ S + Y + I+++M G
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Query: 181 CYPDGGTAKVLL 192
PDG T + L+
Sbjct: 627 VGPDGKTYENLV 638
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 101/207 (48%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G EPD ++ L++ Y +AG + DA V M + G +P + ++ L+ K G++
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
++L++M K GL+ + F NS++N + G + +++ E AD TY L++
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
Y ++G +DK + + + + KGL+P +VT+ + + + ++ M+ G P+
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTM 211
T L+ + + T + + M
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDM 622
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G PD SY+ +V+ Y R G L+ + E MKR G+ P + ++ +
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+++ E+ ++M + G+ DT V ++++ + + G + M + D+ TY
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I+ + Q G + + LF + KGL+PD VT+T I Y K + MI +G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
C P+ T L+ E + ++ M K
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 90/182 (49%)
Query: 11 ASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQ 70
ASYNI++ + G + +A + M+ G TP + S+ +++ + + G + K ++
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 71 MCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGF 130
M + GLK ++++ S++ L R+ + + EE + M D Y LI+ + + G
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 131 IDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKV 190
I F +HS+ + PDV+T+T+ I + + V ++F EM G PD T
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 191 LL 192
L+
Sbjct: 427 LI 428
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 91/211 (43%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G PD Y L+D + + G + A F +M ITP + ++ ++S F + G+
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + + ++M GL+ D+ ++N Y + G V M C ++ TY
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ + G +D L + GL+P++ T+ S + K +++ E +G
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
D T L+ A + ++ +++ M
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G D +Y L+DAY ++G ++ A+ + ++M G+ PT+ + VL++ F G +
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 580
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
E +LN M G+ + NS++ Y + M + D TY L+
Sbjct: 581 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ +A + + LFQ + KG V T++ I + K+K ++ E+F++M G D
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 85/208 (40%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G +P+ Y ++ R L +AE F +M R GI P + L+ F K G+
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ +M + D ++++ + ++G + ++ M E D T+
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN Y +AG + + + G P+VVT+T+ I K+ E+ EM G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVI 208
P+ T ++ E+ ++
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 76/175 (43%), Gaps = 1/175 (0%)
Query: 29 AEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLN 88
A VF + VG+ + S+ +++ + G + + +L M G D ++++N
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 89 LYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKP 148
Y R G+ K+ +++ VM+ + + Y +I + + + E F + +G+ P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 149 DVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAA-CSNEDQTE 202
D V +T+ I + K+ + F EM PD T +++ C D E
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 98/205 (47%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
+R SY ++++ AG +A + + G+ + + SA K +S D+
Sbjct: 406 ERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLF 465
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
+M K G D F N ++ +GR+G+ + + +E C+ DI +YN LIN G+
Sbjct: 466 EKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKN 525
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTA 188
G +D+ F+ + KGL PDVVT+++ + + K + +FEEM+ GC P+ T
Sbjct: 526 GDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTY 585
Query: 189 KVLLAACSNEDQTEQVTTVIRTMDK 213
+LL +T + + M +
Sbjct: 586 NILLDCLEKNGRTAEAVDLYSKMKQ 610
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 98/203 (48%), Gaps = 8/203 (3%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 72
Y+ LV + G +++A +F DM + S+M +L + G + ++L+++
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIH 434
Query: 73 KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFID 132
+ G+ DT + N++ + G+L Q + ++ M+ DI TYNILI +G+ G +D
Sbjct: 435 EKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVD 494
Query: 133 KMEGLFQLLHSKGLKPDVVTWTSRIGAYSKK----KLYVRCLEIFEEMIDSGCYPDGGTA 188
+ +F+ L KPD++++ S I K + +VR F+EM + G PD T
Sbjct: 495 EAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVR----FKEMQEKGLNPDVVTY 550
Query: 189 KVLLAACSNEDQTEQVTTVIRTM 211
L+ ++ E ++ M
Sbjct: 551 STLMECFGKTERVEMAYSLFEEM 573
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 91/191 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
+ G D YN + A G+ ++ +FE MK+ G +P + ++ +L+++F + G
Sbjct: 433 IHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGE 492
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V + +I ++ +S K D NS++N G+ G + M+ D+ TY+
Sbjct: 493 VDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYST 552
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L+ +G+ ++ LF+ + KG +P++VT+ + K ++++ +M G
Sbjct: 553 LMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQG 612
Query: 181 CYPDGGTAKVL 191
PD T VL
Sbjct: 613 LTPDSITYTVL 623
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 88/170 (51%), Gaps = 2/170 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G PD +YNIL+ ++GR G +++A +FE+++R P + S+ L++ K G+
Sbjct: 468 MKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGD 527
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V + +M + GL D ++++ +G+ + + M C+ +I TYNI
Sbjct: 528 VDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNI 587
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWT--SRIGAYSKKKLYVR 168
L++ + G + L+ + +GL PD +T+T R+ + S K +R
Sbjct: 588 LLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERLQSVSHGKSRIR 637
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 99/198 (50%), Gaps = 6/198 (3%)
Query: 11 ASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQ 70
++ NIL+ +G D + +K+ + ++ LL A+ ++ + SK D+ +
Sbjct: 172 STVNILIGFFGNT---EDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCE 228
Query: 71 MCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGF 130
+ + G KLD F N +L+ L + K +V M+ C D TY I+I G+ G
Sbjct: 229 IRRGGHKLDIFAYNMLLDA---LAKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGK 285
Query: 131 IDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKV 190
D+ GLF + ++GL +VV + + + +K K+ + +++F M+++GC P+ T +
Sbjct: 286 CDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSL 345
Query: 191 LLAACSNEDQTEQVTTVI 208
LL E Q ++ V+
Sbjct: 346 LLNLLVAEGQLVRLDGVV 363
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 82/184 (44%), Gaps = 3/184 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC P+ +Y++L++ G L + V E KR +T + S++V SK G+
Sbjct: 331 MVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRY-MTQGIYSYLV--RTLSKLGH 387
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
VS+ + M +K + SML G+ + E+L+ + D YN
Sbjct: 388 VSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNT 447
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+ + G+ I + LF+ + G PD+ T+ I ++ + + IFEE+ S
Sbjct: 448 VFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSD 507
Query: 181 CYPD 184
C PD
Sbjct: 508 CKPD 511
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/248 (18%), Positives = 99/248 (39%), Gaps = 38/248 (15%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ C D +Y I++ GR G ++A +F +M G+T + + L+ +K
Sbjct: 261 MKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKM 320
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V K + ++M ++G + + + + +LNL GQ +++ V+ + + + Y+
Sbjct: 321 VDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQG---IYSY 377
Query: 121 LINRYGQAGFIDKMEGLF-----------------------------------QLLHSKG 145
L+ + G + + LF +H KG
Sbjct: 378 LVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKG 437
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVT 205
+ D + + + A K K ++FE+M G PD T +L+A+ + ++
Sbjct: 438 VVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAI 497
Query: 206 TVIRTMDK 213
+ +++
Sbjct: 498 NIFEELER 505
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 77/161 (47%), Gaps = 6/161 (3%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G + D +YN+L+DA + A VFEDMK+ ++ +++ + G +
Sbjct: 233 GHKLDIFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEA 289
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ N+M GL L+ N+++ + + K +V + M C + TY++L+N
Sbjct: 290 VGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNL 349
Query: 125 YGQAGFIDKMEGLFQL---LHSKGLKPDVVTWTSRIGAYSK 162
G + +++G+ ++ ++G+ +V S++G S+
Sbjct: 350 LVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSE 390
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 106/210 (50%), Gaps = 3/210 (1%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C + + +++L+ Y +A L +A F ++ G T ++ + L+ + + G V
Sbjct: 161 CGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAW 220
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+ ++ +SG+ ++ + LN M+N + G+ K+ L+ ++ DI TYN LI+ Y
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY 280
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
G +++ L + KG P V T+ + I K Y R E+F EM+ SG PD
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340
Query: 186 GTAK-VLLAACSNED--QTEQVTTVIRTMD 212
T + +L+ AC D +TE+V + +R+ D
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRD 370
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 92/192 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
+Q G PD +YN L+ AY G + +A + M G +P + ++ +++ K G
Sbjct: 261 VQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGK 320
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ +++ +M +SGL D+ S+L + G + E+V + M + D+ ++
Sbjct: 321 YERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSS 380
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+++ + ++G +DK F + GL PD V +T I Y +K + + + EM+ G
Sbjct: 381 MMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
Query: 181 CYPDGGTAKVLL 192
C D T +L
Sbjct: 441 CAMDVVTYNTIL 452
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 5/207 (2%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D +YN L+D +G+ G ++ A+ ++ DM I PT S+ +L++A G++++ +
Sbjct: 514 DVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVW 573
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
++M +K + NSM+ Y R G E L M + D +YN LI + +
Sbjct: 574 DEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVRE 633
Query: 129 GFIDKMEGLFQLLHSK--GLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGG 186
+ K GL + + + GL PDV T+ S + + ++ + +MI+ G PD
Sbjct: 634 ENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRS 693
Query: 187 TAKVLLAACSNEDQTEQVTTVIRTMDK 213
T ++ ++D +T R D+
Sbjct: 694 TYTCMINGFVSQD---NLTEAFRIHDE 717
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G P +YN +++ + G A+ VF +M R G++P ++ LL K G+
Sbjct: 296 MPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD 355
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V + E + + M + D +SM++L+ R G K ++ D Y I
Sbjct: 356 VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 415
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI Y + G I L + +G DVVT+ + + K+K+ ++F EM +
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475
Query: 181 CYPDGGTAKVLL 192
+PD T +L+
Sbjct: 476 LFPDSYTLTILI 487
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 96/214 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC D +YN ++ + L +A+ +F +M + P + +L+ K GN
Sbjct: 436 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGN 495
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ ++ +M + ++LD N++L+ +G++G +E+ M + +Y+I
Sbjct: 496 LQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSI 555
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L+N G + + ++ + SK +KP V+ S I Y + E+MI G
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
PD + L+ E+ + +++ M+++
Sbjct: 616 FVPDCISYNTLIYGFVREENMSKAFGLVKKMEEE 649
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 12/184 (6%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P SY+ILV+A G L +A V+++M I PT+ ++ + ++GN S E
Sbjct: 548 PTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESF 607
Query: 68 LNQMCKSGLKLDTFVLNSML-------NLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
L +M G D N+++ N+ G KMEE E G D+ TYN
Sbjct: 608 LEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEE-----EQGGLVPDVFTYNS 662
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+++ + + + + E + + + +G+ PD T+T I + + I +EM+ G
Sbjct: 663 ILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Query: 181 CYPD 184
PD
Sbjct: 723 FSPD 726
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 86/183 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
++ G PD Y IL+ Y R G ++ A + +M + G + ++ +L K
Sbjct: 401 VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM 460
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + + + N+M + L D++ L +++ + +LG E+ M+ D+ TYN
Sbjct: 461 LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT 520
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L++ +G+ G ID + ++ + SK + P ++++ + A K +++EMI
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN 580
Query: 181 CYP 183
P
Sbjct: 581 IKP 583
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 96/210 (45%), Gaps = 1/210 (0%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
PD ++ ++ + R+G L+ A F +K G+ P + +L+ + + G +S ++
Sbjct: 373 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
N+M + G +D N++L+ + G+ +++ M + D T ILI+ + +
Sbjct: 433 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCK 492
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
G + LFQ + K ++ DVVT+ + + + K EI+ +M+ P +
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552
Query: 188 AKVLL-AACSNEDQTEQVTTVIRTMDKDIK 216
+L+ A CS E + K+IK
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIK 582
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 84/192 (43%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G PD +Y L+ + G + + E VF DM+ + P + ++S F+++GN
Sbjct: 331 MLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGN 390
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ K N + ++GL D + ++ Y R G + M C D+ TYN
Sbjct: 391 LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNT 450
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+++ + + + + LF + + L PD T T I + K +E+F++M +
Sbjct: 451 ILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKR 510
Query: 181 CYPDGGTAKVLL 192
D T LL
Sbjct: 511 IRLDVVTYNTLL 522
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 88/181 (48%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM 71
+ NI+V+A + G + ++ G+ P + ++ L+SA+S G + + +++N M
Sbjct: 237 TLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAM 296
Query: 72 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
G + N+++N + G++ + +EV M D +TY L+ + G +
Sbjct: 297 PGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDV 356
Query: 132 DKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVL 191
+ E +F + S+ + PD+V ++S + +++ + L F + ++G PD +L
Sbjct: 357 VETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTIL 416
Query: 192 L 192
+
Sbjct: 417 I 417
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 81/171 (47%)
Query: 14 NILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCK 73
N L+ + R G++ A V++++ R G+ + + ++++A K G + K L+Q+ +
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 74 SGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDK 133
G+ D N++++ Y G + E++ M + TYN +IN + G ++
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 134 MEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ +F + GL PD T+ S + KK V ++F +M PD
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPD 374
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 104/211 (49%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ GC+PDR +Y L+D + +AGFL+ A +++ M+ G++P ++ V+++ K G+
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + +M G + N M++L+ + + ++ M+N E D TY+I
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
++ G G++++ E +F + K PD + + + K + + ++ M+ +G
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
P+ T LL+ ++ + +++ M
Sbjct: 605 LRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 87/180 (48%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
GC+P+ +YN L+ +YGRA +LN+A VF M+ G P ++ L+ +K G +
Sbjct: 394 GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIA 453
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
D+ +M GL DTF + ++N G+ G ++ M + C ++ TYNI+++
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL 513
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ +A L++ + + G +PD VT++ + +F EM PD
Sbjct: 514 HAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPD 573
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 101/205 (49%), Gaps = 3/205 (1%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G + D +Y +V GRA + ++M R G P ++ L+ ++ + +++
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
++ NQM ++G K D ++++++ + G ++ M+ G D TY+++IN
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
G+AG + LF + +G P++VT+ + ++K + Y L+++ +M ++G PD
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 185 GGTAKV---LLAACSNEDQTEQVTT 206
T + +L C ++ E V T
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFT 563
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 88/160 (55%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
Q G EP+ ++NIL+D+YG++G AV E M++ + T+ ++ V++ AF + G+
Sbjct: 318 FQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGD 377
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + E + M + L S++ YGR + K+ VL +EN D+ +N
Sbjct: 378 LKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNC 437
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAY 160
L++ YG+ +M+G+ +L+ KG KPD +T+ + + AY
Sbjct: 438 LVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAY 477
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 5/165 (3%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVG---ITPTMKSHMVLLSAFSK 57
M+ G P+ +YN L+DAYG+A + E+ M +G P + L AF
Sbjct: 247 MRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQM--LGEDDCKPDSWTMNSTLRAFGG 304
Query: 58 TGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADIST 117
G + E+ + SG++ + N +L+ YG+ G + KM V+ M+ I T
Sbjct: 305 NGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVT 364
Query: 118 YNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSK 162
YN++I+ +G+AG + +ME LF+L+ S+ + P VT S + AY +
Sbjct: 365 YNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGR 409
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 2/214 (0%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
C+PD +Y+IL+ ++ + + + + DM+R GI P ++ L+ A+ K +
Sbjct: 216 NCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEM 275
Query: 65 EDILNQMC-KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN 123
E L QM + K D++ +NS L +G GQ ME ++ E +I T+NIL++
Sbjct: 276 ESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLD 335
Query: 124 RYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYP 183
YG++G KM + + + +VT+ I A+ + + +F M +P
Sbjct: 336 SYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFP 395
Query: 184 DGGTAKVLLAACSNEDQTEQVTTVIRTMD-KDIK 216
T L+ A + +++ V+R ++ DI+
Sbjct: 396 SCVTLCSLVRAYGRASKADKIGGVLRFIENSDIR 429
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 89/178 (50%), Gaps = 2/178 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRV-GITPTMKSHMVLLSAFSKTG 59
M + GC + Y LV AY R+G + A + E MK P + ++ +L+ +F +
Sbjct: 176 MINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVF 235
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVM-ENGSCEADISTY 118
K +D+L+ M + G++ +T N++++ YG+ F +ME L M C+ D T
Sbjct: 236 AFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTM 295
Query: 119 NILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
N + +G G I+ ME ++ S G++P++ T+ + +Y K Y + + E M
Sbjct: 296 NSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYM 353
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 90/189 (47%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C+PD + N + A+G G + E +E + GI P +++ +LL ++ K+GN K
Sbjct: 288 CKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMS 347
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
++ M K N +++ +GR G +ME + +M++ T L+ Y
Sbjct: 348 AVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAY 407
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
G+A DK+ G+ + + + ++ D+V + + AY + + + + E M G PD
Sbjct: 408 GRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDK 467
Query: 186 GTAKVLLAA 194
T + ++ A
Sbjct: 468 ITYRTMVKA 476
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 87/177 (49%), Gaps = 3/177 (1%)
Query: 29 AEAVFEDMK-RVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSML 87
A VFE ++ ++ P + ++ L+ K K ++ +M G ++ V +++
Sbjct: 133 AIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALV 192
Query: 88 NLYGRLGQFGKMEEVLTVMENG-SCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGL 146
+ Y R G+F +L M++ +C+ D+ TY+ILI + Q DK++ L + +G+
Sbjct: 193 SAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGI 252
Query: 147 KPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI-DSGCYPDGGTAKVLLAACSNEDQTE 202
+P+ +T+ + I AY K K++V +M+ + C PD T L A Q E
Sbjct: 253 RPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIE 309
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 71/134 (52%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM 71
+YN+++DA+GRAG L E +F M+ I P+ + L+ A+ + K +L +
Sbjct: 364 TYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFI 423
Query: 72 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
S ++LD N +++ YGR+ +F +M+ VL +ME + D TY ++ Y +G
Sbjct: 424 ENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMT 483
Query: 132 DKMEGLFQLLHSKG 145
++ L ++ S G
Sbjct: 484 THVKELHGVVESVG 497
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 101/221 (45%), Gaps = 16/221 (7%)
Query: 2 QHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNV 61
+ + +P+ Y L+ G+ A +F++M G + + L+SA+S++G
Sbjct: 142 EQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRF 201
Query: 62 SKCEDILNQM-----CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADIS 116
+L +M C+ + + ++ S L ++ F K++++L+ M +
Sbjct: 202 DAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFA----FDKVQDLLSDMRRQGIRPNTI 257
Query: 117 TYNILINRYGQAGFIDKMEG-LFQLLHSKGLKPDVVTWTSRIGAY---SKKKLYVRCLEI 172
TYN LI+ YG+A +ME L Q+L KPD T S + A+ + ++ C E
Sbjct: 258 TYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEK 317
Query: 173 FEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
F+ SG P+ T +LL + ++++ V+ M K
Sbjct: 318 FQ---SSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQK 355
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 111/213 (52%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G + D +YN L+ + AG +D + DM + I+P + + VL+ +F K G
Sbjct: 289 MEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGK 348
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + + +L +M + G+ +T NS+++ + + + + +++ +M + C+ DI T+NI
Sbjct: 349 LREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNI 408
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN Y +A ID LF+ + +G+ + VT+ + + + + ++F+EM+
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
PD + K+LL + + E+ + ++K
Sbjct: 469 VRPDIVSYKILLDGLCDNGELEKALEIFGKIEK 501
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 93/211 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC+PD ++NIL++ Y +A ++D +F +M G+ ++ L+ F ++G
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + + +M ++ D +L+ G+ K E+ +E E DI Y I
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMI 513
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I+ A +D LF L KG+K D + I +K + +F +M + G
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEG 573
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
PD T +L+ A +D +I M
Sbjct: 574 HAPDELTYNILIRAHLGDDDATTAAELIEEM 604
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 100/211 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
+ +G EPD +N L++ +++A + + M +G PT+ + L++ G
Sbjct: 149 IMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGK 208
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
VS ++++M ++G + + +LN+ + GQ E+L ME + + D Y+I
Sbjct: 209 VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I+ + G +D LF + KG K D++T+ + IG + + ++ +MI
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
P+ T VL+ + E + + +++ M
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEM 359
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 5/222 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M MG +P + N LV+ G ++DA + + M G P ++ +L+ K+G
Sbjct: 184 MVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQ 243
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ ++L +M + +KLD + +++ + G + ME +ADI TYN
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNT 303
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI + AG D L + + + + P+VVT++ I ++ K+ ++ +EM+ G
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM-----DKDIKT 217
P+ T L+ E++ E+ ++ M D DI T
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMT 405
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/211 (18%), Positives = 97/211 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G +P+ +Y +++ ++G A + M+ I + +++ K G+
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ ++ N+M G K D N+++ + G++ ++L M ++ T+++
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ + + G + + + L + + +G+ P+ +T+ S I + K+ +++ + MI G
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
C PD T +L+ ++ + + R M
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREM 429
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 92/211 (43%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ + D Y+I++D + G L++A +F +M+ G + ++ L+ F G
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+L M K + + + +++ + + G+ + +++L M + TYN
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNS 373
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ + + +++ + L+ SKG PD++T+ I Y K LE+F EM G
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRG 433
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+ T L+ + E + + M
Sbjct: 434 VIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 104/211 (49%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ GC+PDR +Y L+D + +AGFL+ A +++ M+ G++P ++ V+++ K G+
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + +M G + N M++L+ + + ++ M+N E D TY+I
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
++ G G++++ E +F + K PD + + + K + + ++ M+ +G
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
P+ T LL+ ++ + +++ M
Sbjct: 605 LRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 87/180 (48%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
GC+P+ +YN L+ +YGRA +LN+A VF M+ G P ++ L+ +K G +
Sbjct: 394 GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIA 453
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
D+ +M GL DTF + ++N G+ G ++ M + C ++ TYNI+++
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL 513
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ +A L++ + + G +PD VT++ + +F EM PD
Sbjct: 514 HAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPD 573
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 104/211 (49%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ GC+PDR +Y L+D + +AGFL+ A +++ M+ G++P ++ V+++ K G+
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + +M G + N M++L+ + + ++ M+N E D TY+I
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
++ G G++++ E +F + K PD + + + K + + ++ M+ +G
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
P+ T LL+ ++ + +++ M
Sbjct: 605 LRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 87/180 (48%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
GC+P+ +YN L+ +YGRA +LN+A VF M+ G P ++ L+ +K G +
Sbjct: 394 GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIA 453
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
D+ +M GL DTF + ++N G+ G ++ M + C ++ TYNI+++
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL 513
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ +A L++ + + G +PD VT++ + +F EM PD
Sbjct: 514 HAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPD 573
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 1/200 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G P+ ++N+L+D YG+A +F KR G+ + S+ +++A+ K +
Sbjct: 690 MIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVI-SYNTIIAAYGKNKD 748
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + M G + N++L+ YG+ Q K +L M+ + D TYNI
Sbjct: 749 YTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNI 808
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+IN YG+ G+ID++ + + L GL PD+ ++ + I AY + + + +EM
Sbjct: 809 MINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRN 868
Query: 181 CYPDGGTAKVLLAACSNEDQ 200
PD T L+ A D+
Sbjct: 869 IIPDKVTYTNLVTALRRNDE 888
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 86/163 (52%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D SYN ++ AYG+ + + ++M+ G + +++++ LL A+ K + K IL
Sbjct: 732 DVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSIL 791
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
+M KS D + N M+N+YG G ++ +VL ++ D+ +YN LI YG
Sbjct: 792 KRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIG 851
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLE 171
G +++ GL + + + + PD VT+T+ + A + ++ ++
Sbjct: 852 GMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIK 894
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 88/184 (47%), Gaps = 1/184 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G P+ A+ +L+ Y + + +AE F M++ GI ++ +++ +++
Sbjct: 236 MLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIV-CESAYSSMITIYTRLRL 294
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
K E++++ M + ++L MLN Y + G+ E +L ME +I YN
Sbjct: 295 YDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNT 354
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI YG+ ++ +GLF L + GL+PD ++ S I + + Y ++E+ G
Sbjct: 355 LITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCG 414
Query: 181 CYPD 184
P+
Sbjct: 415 YKPN 418
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 94/218 (43%), Gaps = 8/218 (3%)
Query: 1 MQHM-------GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLS 53
+QH+ G ++ YN +++ RA L++ FE+M R G TP + VLL
Sbjct: 648 LQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLD 707
Query: 54 AFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEA 113
+ K K ++ + G+ +D N+++ YG+ + M + M+
Sbjct: 708 VYGKAKLFKKVNELFLLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSV 766
Query: 114 DISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIF 173
+ YN L++ YG+ ++K + + + PD T+ I Y ++ ++
Sbjct: 767 SLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVL 826
Query: 174 EEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+E+ +SG PD + L+ A E+ +++ M
Sbjct: 827 KELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEM 864
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 2/214 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDM-KRVGITPTMKSHMVLLSAFSKTG 59
++ G DR ++I+V Y +AG L +A +V E M ++ I P + +L + K
Sbjct: 584 LKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCD 643
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
K + + ++ KSG+ + + N ++N R ++ M + T+N
Sbjct: 644 LQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFN 703
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
+L++ YG+A K+ LF L G+ DV+++ + I AY K K Y + M
Sbjct: 704 VLLDVYGKAKLFKKVNELFLLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFD 762
Query: 180 GCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
G LL A + Q E+ ++++ M K
Sbjct: 763 GFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKK 796
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 85/176 (48%), Gaps = 3/176 (1%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
CE ++Y+ ++ Y R + AE V + MK+ + +++ +V+L+A+S+ G + E
Sbjct: 278 CE---SAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAE 334
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
IL M +G + N+++ YG++ + + + + N E D ++Y +I +
Sbjct: 335 SILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGW 394
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGC 181
G+A ++ + +Q L G KP+ + I +K ++ E+M GC
Sbjct: 395 GRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGC 450
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 94/215 (43%), Gaps = 2/215 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G P+ +YN L+ YG+ + A+ +F + +G+ P S+ ++ + + N
Sbjct: 340 MEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADN 399
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + ++ + G K ++F L +++NL + G + + M C+ S I
Sbjct: 400 YEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYS-SILGI 458
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
++ Y + G ID + + + ++ + +++S + AY K + CL + E
Sbjct: 459 ILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRD 518
Query: 181 CYPDGGTAKVLLAACSNEDQ-TEQVTTVIRTMDKD 214
+ +L+ +C Q T+ V M+ D
Sbjct: 519 SAFESHLYHLLICSCKESGQLTDAVKIYNHKMESD 553
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 90/200 (45%), Gaps = 2/200 (1%)
Query: 16 LVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC-KS 74
++D Y G ++AE ++ ++K G+ +++ + K G++ + +L M +
Sbjct: 564 MIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQK 623
Query: 75 GLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKM 134
+ D ++ ML +Y + K++ + + + YN +IN +A +D++
Sbjct: 624 DIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDEL 683
Query: 135 EGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAA 194
G F+ + G P+ VT+ + Y K KL+ + E+F G ++ A
Sbjct: 684 SGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAY 743
Query: 195 CSNEDQTEQVTTVIRTMDKD 214
N+D T +++ I+ M D
Sbjct: 744 GKNKDYT-NMSSAIKNMQFD 762
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/210 (16%), Positives = 98/210 (46%), Gaps = 1/210 (0%)
Query: 3 HMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVS 62
H ++ S++ LV AY + G ++D + + K + +L+ + ++G ++
Sbjct: 481 HNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLT 540
Query: 63 KCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILI 122
I N +S +++ + ++M+++Y +G+F + E++ +++ D ++I++
Sbjct: 541 DAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVV 600
Query: 123 NRYGQAGFIDKMEGLFQLL-HSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGC 181
Y +AG +++ + +++ K + PDV + + Y K L + ++ + SG
Sbjct: 601 RMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGI 660
Query: 182 YPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+ + ++ C+ ++++ M
Sbjct: 661 HWNQEMYNCVINCCARALPLDELSGTFEEM 690
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 1/217 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ GC PD +YN+LV+ + G L++A DM G P + +H ++L + TG
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
E +L M + G N ++N R G G+ ++L M C+ + +YN
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L++ + + +D+ + + S+G PD+VT+ + + A K +EI ++ G
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMD-KDIK 216
C P T ++ + +T + ++ M KD+K
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLK 481
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 99/211 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M C PD +Y IL++A R + A + ++M+ G TP + ++ VL++ K G
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + LN M SG + + N +L G++ E++L M + T+NI
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN + G + + + + + G +P+ +++ + + K+K R +E E M+ G
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
CYPD T +L A + + E ++ +
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G P ++NIL++ R G L A + E M + G P S+ LL F K
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + + L +M G D N+ML + G+ E+L + + C + TYN
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I+ +AG K L + +K LKPD +T++S +G S++ ++ F E G
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 181 CYPDGGTAKVLLAACSNEDQTEQ 203
P+ T ++ QT++
Sbjct: 515 IRPNAVTFNSIMLGLCKSRQTDR 537
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 102/213 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC+P+ ++NI++ + G DAE + DM R G +P++ + +L++ + G
Sbjct: 300 MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGL 359
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + DIL +M + G + ++ N +L+ + + + + E L M + C DI TYN
Sbjct: 360 LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
++ + G ++ + L SKG P ++T+ + I +K + +++ +EM
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
PD T L+ S E + ++ ++
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFER 512
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 97/211 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC+P+ SYN L+ + + ++ A E M G P + ++ +L+A K G
Sbjct: 370 MPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V +ILNQ+ G N++++ + G+ GK ++L M + D TY+
Sbjct: 430 VEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS 489
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L+ + G +D+ F G++P+ VT+ S + K + R ++ MI+ G
Sbjct: 490 LVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRG 549
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
C P+ + +L+ + E ++ ++ +
Sbjct: 550 CKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
+ M PD +YN ++ + +G L A V + M + P + ++ +L+ A +
Sbjct: 195 LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSG 254
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V +L++M G D N ++N + G+ + + L M + C+ ++ T+NI
Sbjct: 255 VGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
++ G E L + KG P VVT+ I +K L R ++I E+M G
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
C P+ + LL E + ++ + M
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 4/197 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M + G PD L+ + R G A + E ++ G P + ++ V++S + K G
Sbjct: 128 MVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGE 187
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
++ +L++M S D N++L G+ + EVL M C D+ TY I
Sbjct: 188 INNALSVLDRMSVSP---DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTI 244
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI + + L + +G PDVVT+ + K+ ++ +M SG
Sbjct: 245 LIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304
Query: 181 CYPDGGTAKVLLAA-CS 196
C P+ T ++L + CS
Sbjct: 305 CQPNVITHNIILRSMCS 321
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 3/190 (1%)
Query: 22 RAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTF 81
R G L + E+M G P + L+ F + G K IL + SG D
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 82 VLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLL 141
N M++ Y + G+ + L+V++ S D+ TYN ++ +G + + + +
Sbjct: 174 TYNVMISGYCKAGE---INNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 142 HSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQT 201
+ PDV+T+T I A + +++ +EM D GC PD T VL+ E +
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 202 EQVTTVIRTM 211
++ + M
Sbjct: 291 DEAIKFLNDM 300
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 64/142 (45%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
GC P +YN ++D +AG A + ++M+ + P ++ L+ S+ G V +
Sbjct: 444 GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
++ + G++ + NS++ + Q + + L M N C+ + ++Y ILI
Sbjct: 504 IKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG 563
Query: 125 YGQAGFIDKMEGLFQLLHSKGL 146
G + L L +KGL
Sbjct: 564 LAYEGMAKEALELLNELCNKGL 585
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 92/180 (51%), Gaps = 5/180 (2%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P+ + L+ + R G L +A+ V MK G+ P + LLS ++ G ++ D+
Sbjct: 234 PNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDL 293
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTV---MENGSCEADISTYNILINR 124
+N M K G + + ++ R + +M+E + V ME CEADI TY LI+
Sbjct: 294 MNDMRKRGFEPNVNCYTVLIQALCRTEK--RMDEAMRVFVEMERYGCEADIVTYTALISG 351
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ + G IDK + + KG+ P VT+ + A+ KK+ + CLE+ E+M GC+PD
Sbjct: 352 FCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPD 411
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 103/214 (48%), Gaps = 2/214 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G EPD + L+DA + G + +A VFEDM R P ++ LL + + G
Sbjct: 193 MPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGWCREGK 251
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + +++L QM ++GL+ D V ++L+ Y G+ +++ M E +++ Y +
Sbjct: 252 LMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTV 311
Query: 121 LINRYGQA-GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
LI + +D+ +F + G + D+VT+T+ I + K + + + ++M
Sbjct: 312 LIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKK 371
Query: 180 GCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
G P T ++ A ++Q E+ +I M +
Sbjct: 372 GVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKR 405
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 3/210 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRA-GFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTG 59
M+ G EP+ Y +L+ A R +++A VF +M+R G + ++ L+S F K G
Sbjct: 297 MRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWG 356
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
+ K +L+ M K G+ ++ + + QF + E++ M+ C D+ YN
Sbjct: 357 MIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYN 416
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
++I + G + + L+ + + GL P V T+ I ++ + + F+EM+
Sbjct: 417 VVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSR 476
Query: 180 GCY--PDGGTAKVLLAACSNEDQTEQVTTV 207
G + P GT K LL +D+ E V
Sbjct: 477 GIFSAPQYGTLKSLLNNLVRDDKLEMAKDV 506
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 106/213 (49%), Gaps = 1/213 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMK-RVGITPTMKSHMVLLSAFSKTG 59
M GC S N++V + + G + DA ++M + G P + L++ K G
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
+V +I++ M + G D + NS+++ +LG+ + EVL M C + TYN
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
LI+ + +++ L ++L SKG+ PDV T+ S I + + +E+FEEM
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 180 GCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMD 212
GC PD T +L+ + ++ + ++ +++ M+
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 93/198 (46%), Gaps = 1/198 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ GC +YN L+D + +A +AE +F++M+ G++ ++ L+ K+
Sbjct: 461 MELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRR 520
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V +++QM G K D + NS+L + R G K +++ M + CE DI TY
Sbjct: 521 VEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGT 580
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ +AG ++ L + + KG+ + I +K+ + +F EM++
Sbjct: 581 LISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQN 640
Query: 181 -CYPDGGTAKVLLAACSN 197
PD + +++ N
Sbjct: 641 EAPPDAVSYRIVFRGLCN 658
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 102/215 (47%), Gaps = 7/215 (3%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G +PD +++N+L+ A RA L A + EDM G+ P K+ ++ + + G+
Sbjct: 180 MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGD 239
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCE----ADIS 116
+ I QM + G +N +++ + + G++E+ L ++ S + D
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKE---GRVEDALNFIQEMSNQDGFFPDQY 296
Query: 117 TYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
T+N L+N +AG + + ++ +G PDV T+ S I K +E+ ++M
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 177 IDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
I C P+ T L++ E+Q E+ T + R +
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 1/205 (0%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P+ A Y ++ GR+G +D + + EDMK + ++L+ ++++ + +
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140
Query: 68 LNQMCKS-GLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
++ M GLK DT N MLNL +E M + D+ST+N+LI
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC 200
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGG 186
+A + + + + S GL PD T+T+ + Y ++ L I E+M++ GC
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260
Query: 187 TAKVLLAACSNEDQTEQVTTVIRTM 211
+ V++ E + E I+ M
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEM 285
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 92/208 (44%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G PD+ ++N LV+ +AG + A + + M + G P + ++ ++S K G V +
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
++L+QM +T N++++ + Q + E+ V+ + D+ T+N LI
Sbjct: 350 VEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
LF+ + SKG +PD T+ I + K L + ++M SGC
Sbjct: 410 LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTMD 212
T L+ ++T + + M+
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFDEME 497
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 93/207 (44%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G PD ++N L+ A +FE+M+ G P ++ +L+ + G + +
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
++L QM SG N++++ + + + + EE+ ME + TYN LI+
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDG 514
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
++ ++ L + +G KPD T+ S + + + + +I + M +GC PD
Sbjct: 515 LCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD 574
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTM 211
T L++ + E + ++R++
Sbjct: 575 IVTYGTLISGLCKAGRVEVASKLLRSI 601
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 86/206 (41%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C P+ +YN L+ + + +A + + GI P + + L+ T N
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
++ +M G + D F N +++ G+ + +L ME C + TYN LI+ +
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
+A + E +F + G+ + VT+ + I K + ++ ++MI G PD
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540
Query: 186 GTAKVLLAACSNEDQTEQVTTVIRTM 211
T LL ++ +++ M
Sbjct: 541 YTYNSLLTHFCRGGDIKKAADIVQAM 566
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 104/213 (48%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G P+ +YN ++D++ +G +DA+ + M I P + + L++AF K
Sbjct: 36 MHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERK 95
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
VS+ E+I +M + + T NSM++ + + + + +L M + C D+ T++
Sbjct: 96 VSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFST 155
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN Y +A +D +F +H +G+ + VT+T+ I + + ++ EMI G
Sbjct: 156 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCG 215
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
PD T +LA ++ + + ++ + K
Sbjct: 216 VAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 85/177 (48%)
Query: 16 LVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSG 75
+VD + G +A+ +F +M GI P + ++ ++ +F +G S + +L M +
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 76 LKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKME 135
+ D ++++N + + + + EE+ M S TYN +I+ + + +D +
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 136 GLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLL 192
+ + SKG PDVVT+++ I Y K K +EIF EM G + T L+
Sbjct: 136 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 192
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 68/141 (48%)
Query: 71 MCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGF 130
M +S +K D + ++++ + G + + T M ++ TYN +I+ + +G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 131 IDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKV 190
+ L + + K + PD+VT+++ I A+ K++ EI++EM+ +P T
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 191 LLAACSNEDQTEQVTTVIRTM 211
++ +D+ + ++ +M
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSM 141
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 97/208 (46%)
Query: 4 MGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSK 63
G P+ YN L+D+ + ++AE +F+ M ++G+ P ++ +L+ F + G +
Sbjct: 361 FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDT 420
Query: 64 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN 123
L +M +GLKL + NS++N + + G E + M N E + TY L+
Sbjct: 421 ALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMG 480
Query: 124 RYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYP 183
Y G I+K L+ + KG+ P + T+T+ + + L +++F EM + P
Sbjct: 481 GYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKP 540
Query: 184 DGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+ T V++ E + ++ M
Sbjct: 541 NRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 92/197 (46%), Gaps = 3/197 (1%)
Query: 1 MQHMGC---EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSK 57
M M C P A+ + LV+ + G + +A + + + G++P + + L+ + K
Sbjct: 320 MDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCK 379
Query: 58 TGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADIST 117
+ E + ++M K GL+ + + +++++ R G+ L M + + +
Sbjct: 380 GRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYP 439
Query: 118 YNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
YN LIN + + G I EG + +K L+P VVT+TS +G Y K + L ++ EM
Sbjct: 440 YNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMT 499
Query: 178 DSGCYPDGGTAKVLLAA 194
G P T LL+
Sbjct: 500 GKGIAPSIYTFTTLLSG 516
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 91/213 (42%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M +G P+ +Y+IL+D + R G L+ A + +M G+ ++ + L++ K G+
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGD 452
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+S E + +M L+ S++ Y G+ K + M I T+
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTT 512
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L++ +AG I LF + +KP+ VT+ I Y ++ + E +EM + G
Sbjct: 513 LLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG 572
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
PD + + L+ Q + + + K
Sbjct: 573 IVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 92/198 (46%), Gaps = 1/198 (0%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDM-KRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM 71
+++L+ Y R+ + D VF+ M +V + P +++ LL K + ++ N M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 72 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
G++ D ++ ++ L + +E++ ME C+ +I YN+LI+ + +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 132 DKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVL 191
+ G+ + L K LKPDVVT+ + + K + + LE+ +EM+ P L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 192 LAACSNEDQTEQVTTVIR 209
+ + E+ +++
Sbjct: 339 VEGLRKRGKIEEALNLVK 356
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 86/184 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G P ++ L+ RAG + DA +F +M + P ++ V++ + + G+
Sbjct: 498 MTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGD 557
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+SK + L +M + G+ DT+ +++ GQ + + + + G+CE + Y
Sbjct: 558 MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L++ + + G +++ + Q + +G+ D+V + I K K + +EM D G
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRG 677
Query: 181 CYPD 184
PD
Sbjct: 678 LKPD 681
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 89/197 (45%), Gaps = 4/197 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G +PD Y ++DA + G +A +++ M G P ++ +++ K G
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGF 732
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQ--FGKMEEVLTVMENGSCEADISTY 118
V++ E + ++M + L++ + G+ K E+ + G A+ +TY
Sbjct: 733 VNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILKGLL-ANTATY 790
Query: 119 NILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID 178
N+LI + + G I++ L + G+ PD +T+T+ I ++ + +E++ M +
Sbjct: 791 NMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTE 850
Query: 179 SGCYPDGGTAKVLLAAC 195
G PD L+ C
Sbjct: 851 KGIRPDRVAYNTLIHGC 867
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 95/213 (44%), Gaps = 1/213 (0%)
Query: 3 HMG-CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNV 61
H G CE + Y L+ + R G L +A +V ++M + G+ + + VL+ K +
Sbjct: 604 HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDR 663
Query: 62 SKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNIL 121
+L +M GLK D + SM++ + G F + + +M N C + TY +
Sbjct: 664 KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAV 723
Query: 122 INRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGC 181
IN +AGF+++ E L + P+ VT+ + +K ++ ++ I G
Sbjct: 724 INGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGL 783
Query: 182 YPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
+ T +L+ + + E+ + +I M D
Sbjct: 784 LANTATYNMLIRGFCRQGRIEEASELITRMIGD 816
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 71/174 (40%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
EP +Y L+ Y G +N A ++ +M GI P++ + LLS + G +
Sbjct: 469 EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVK 528
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+ N+M + +K + N M+ Y G K E L M D +Y LI+
Sbjct: 529 LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC 588
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
G + + LH + + + +T + + ++ L + +EM+ G
Sbjct: 589 LTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 101/211 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
++ G PD +YN +++ YG+A +A + ++M G+ P S+ LLS + +
Sbjct: 251 LKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHK 310
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + +M + LD N M+++YG+L + + + + E ++ +YN
Sbjct: 311 FLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNT 370
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
++ YG+A + LF+L+ K ++ +VVT+ + I Y K + + + +EM G
Sbjct: 371 ILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRG 430
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
P+ T +++ + ++ T+ + +
Sbjct: 431 IEPNAITYSTIISIWGKAGKLDRAATLFQKL 461
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 118/280 (42%), Gaps = 66/280 (23%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ + C D + NI++D YG+ + +A+ +F ++++ I P + S+ +L + +
Sbjct: 321 MKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAEL 380
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + M + ++ + N+M+ +YG+ + K ++ M++ E + TY+
Sbjct: 381 FGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYST 440
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLK-------------------------------PD 149
+I+ +G+AG +D+ LFQ L S G++ PD
Sbjct: 441 IISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPD 500
Query: 150 VV------------------TWTSR-----------------IGAYSKKKLYVRCLEIFE 174
+ TW R I YS+ + YV +E+FE
Sbjct: 501 NIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFE 560
Query: 175 EMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
+M +G +PD ++L A + + E+ TV R M ++
Sbjct: 561 KMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEE 600
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 98/206 (47%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P +YN+++ RA + A +F++M++ + P ++ L+++F K G
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
L +M + + D + ++++ L RL + K + + ++ D+ YN +IN YG+
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
A + L + ++ G+ P+ V++++ + Y + ++ L +F EM + C D T
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTT 332
Query: 188 AKVLLAACSNEDQTEQVTTVIRTMDK 213
+++ D ++ + ++ K
Sbjct: 333 CNIMIDVYGQLDMVKEADRLFWSLRK 358
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 110/246 (44%), Gaps = 35/246 (14%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEA----------------------------- 31
M+ PDR +Y+ L+ ++G+ G + A +
Sbjct: 181 MRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCD 240
Query: 32 ------VFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNS 85
+F +KR GITP + ++ +++ + K + ++ +M ++G+ +T ++
Sbjct: 241 YSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYST 300
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
+L++Y +F + V M+ +C D++T NI+I+ YGQ + + + LF L
Sbjct: 301 LLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMD 360
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVT 205
++P+VV++ + + Y + +L+ + +F M + T ++ + E+ T
Sbjct: 361 IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKAT 420
Query: 206 TVIRTM 211
+++ M
Sbjct: 421 NLVQEM 426
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 68/152 (44%)
Query: 42 TPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEE 101
TP++ ++ V+L + + ++M + L D + ++++ +G+ G F
Sbjct: 152 TPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALS 211
Query: 102 VLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYS 161
L ME D+ Y+ LI + K +F L G+ PD+V + S I Y
Sbjct: 212 WLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYG 271
Query: 162 KKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLA 193
K KL+ + +EM ++G P+ + LL+
Sbjct: 272 KAKLFREARLLIKEMNEAGVLPNTVSYSTLLS 303
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 94/210 (44%), Gaps = 9/210 (4%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G E D+ Y ++ AY R G + A+ + ++K P + +L +K G +
Sbjct: 465 GVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITIL----AKAGRTEEA 520
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ Q +SG D V M+NLY R ++ + EV M D + +++N
Sbjct: 521 TWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNA 580
Query: 125 YGQAGFIDKMEGLFQLLHSKG-LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYP 183
YG+ +K + +++ + +G + PD V + + YS KK + +F+ + P
Sbjct: 581 YGKQREFEKADTVYREMQEEGCVFPDEVHF-QMLSLYSSKKDFEMVESLFQRLESD---P 636
Query: 184 DGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
+ + ++ L + ++ +++ R M++
Sbjct: 637 NVNSKELHLVVAALYERADKLNDASRVMNR 666
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 97/178 (54%), Gaps = 2/178 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVG-ITPTMKSHMVLLSAFSKTG 59
M G EP Y L+ AY R+ ++DA ++ + MK P + ++ LL A
Sbjct: 150 MLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDAS 209
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLT-VMENGSCEADISTY 118
+ + +M + + +T N +L+ YGR+G+F +ME+VL+ ++ + +C+ D+ T
Sbjct: 210 QFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTM 269
Query: 119 NILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
NI+++ +G G ID ME ++ + G++P+ T+ IG+Y KK++Y + + E M
Sbjct: 270 NIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYM 327
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 78/157 (49%), Gaps = 1/157 (0%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C+PD +Y+ L+ A A + ++++++M ITP + ++LS + + G + E
Sbjct: 191 CQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQME 250
Query: 66 DILNQMCKS-GLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+L+ M S K D + +N +L+++G +G+ ME N E + T+NILI
Sbjct: 251 KVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGS 310
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYS 161
YG+ DKM + + + T+ + I A++
Sbjct: 311 YGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFA 347
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 87/200 (43%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
C+PD + NI++ +G G ++ E+ +E + GI P ++ +L+ ++ K K
Sbjct: 261 ACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKM 320
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
++ M K T N+++ + +G ME M + +AD T+ LIN
Sbjct: 321 SSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLING 380
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
Y AG K+ QL + + + + I A +K + ++ M + C D
Sbjct: 381 YANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCD 440
Query: 185 GGTAKVLLAACSNEDQTEQV 204
T ++++ A E +++
Sbjct: 441 SRTFEIMVEAYEKEGMNDKI 460
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 78/162 (48%)
Query: 2 QHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNV 61
++ G EP+ ++NIL+ +YG+ + +V E M+++ T ++ ++ AF+ G+
Sbjct: 293 RNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDA 352
Query: 62 SKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNIL 121
E +QM G+K DT ++N Y G F K+ + + + + YN +
Sbjct: 353 KNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAV 412
Query: 122 INRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKK 163
I+ +A + +ME ++ + + D T+ + AY K+
Sbjct: 413 ISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKE 454
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 74/157 (47%), Gaps = 2/157 (1%)
Query: 43 PTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEV 102
P ++M LL K+G ++ + + ++M + GL+ + ++L Y R +
Sbjct: 122 PKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSI 181
Query: 103 LTVMEN-GSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYS 161
L M++ C+ D+ TY+ L+ A D ++ L++ + + + P+ VT + Y
Sbjct: 182 LDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYG 241
Query: 162 KKKLYVRCLEIFEEM-IDSGCYPDGGTAKVLLAACSN 197
+ + + ++ +M + + C PD T ++L+ N
Sbjct: 242 RVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGN 278
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 117 TYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
TY L+ G++G ++ + LF + +GL+P V +T+ + AY++ L I ++M
Sbjct: 126 TYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKM 185
Query: 177 ID-SGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKDIKT 217
C PD T LL AC + Q + V ++ + MD+ + T
Sbjct: 186 KSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLIT 227
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 59/129 (45%)
Query: 11 ASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQ 70
++YN +++A+ G + E F+ M+ G+ K+ L++ ++ G K +
Sbjct: 337 STYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQL 396
Query: 71 MCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGF 130
K + +T N++++ + +ME V M+ C D T+ I++ Y + G
Sbjct: 397 AAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEGM 456
Query: 131 IDKMEGLFQ 139
DK+ L Q
Sbjct: 457 NDKIYYLEQ 465
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 104/222 (46%), Gaps = 5/222 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M + G P+ +YN L+ G +DA + DM I P + + L+ AF K G
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + E + ++M K + D F +S++N + + + + + +M + C ++ TYN
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 401
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI + +A +D+ LF+ + +GL + VT+T+ I + + + +F++M+ G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIR-----TMDKDIKT 217
PD T +LL N + E V M+ DI T
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYT 503
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 6/209 (2%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C P+ +YN L+ + +A +++ +F +M + G+ ++ L+ F + +
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVME---NGSCEADISTYNILI 122
+ QM G+ D + +L+ L GK+E L V E E DI TYNI+I
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLD---GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMI 508
Query: 123 NRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCY 182
+AG ++ LF L KG+KP+VVT+T+ + + +K L +F EM + G
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL 568
Query: 183 PDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
PD GT L+ A + +IR M
Sbjct: 569 PDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ EP YN ++DA +NDA +F +M GI P + ++ L+ G
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S +L+ M + + + +++++ + + G+ + E++ M S + DI TY+
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 366
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN + +D+ + +F+L+ SK P+VVT+ + I + K K +E+F EM G
Sbjct: 367 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG 426
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
+ T L+ + + V + M D
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD 460
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 99/211 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ++G + +Y+IL++ + R L+ A AV M ++G P + + LL+ F
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR 166
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+S ++ QM + G + D+F N++++ R + + ++ M C+ D+ TY I
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
++N + G ID L + + ++P VV + + I A K L +F EM + G
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
P+ T L+ N + + ++ M
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 98/209 (46%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
GC+PD +Y I+V+ + G ++ A ++ + M++ I P + + ++ A NV+
Sbjct: 216 GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDA 275
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
++ +M G++ + NS++ G++ +L+ M ++ T++ LI+
Sbjct: 276 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 335
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ + G + + E L+ + + + PD+ T++S I + +FE MI C+P+
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
T L+ + ++ + R M +
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQ 424
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 94/211 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M MG +PD ++N L+ R ++A A+ + M G P + ++ ++++ K G+
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ +L +M + ++ + N++++ + T M+N ++ TYN
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI G L + + + P+VVT+++ I A+ K+ V ++++EMI
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
PD T L+ D+ ++ + M
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 77/188 (40%)
Query: 26 LNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNS 85
L+DA +F DM + P++ LLSA +K + QM G+ + + +
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
++N + R Q VL M E DI T N L+N + I L + G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVT 205
+PD T+ + I + + + + M+ GC PD T +++ +
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 206 TVIRTMDK 213
++++ M++
Sbjct: 242 SLLKKMEQ 249
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 84/205 (40%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P ++ L+ A + + ++ E M+ +GI+ + ++ +L++ F + +S +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
L +M K G + D LNS+LN + + ++ M + D T+N LI+ +
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
+ L + KG +PD+VT+ + K+ L + ++M P
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 188 AKVLLAACSNEDQTEQVTTVIRTMD 212
++ A N + MD
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMD 283
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 59/123 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
+Q EPD +YNI+++ +AG + D +F + G+ P + ++ ++S F + G
Sbjct: 492 LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 551
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + + +M + G D+ N+++ + R G E++ M + D ST +
Sbjct: 552 KEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGL 611
Query: 121 LIN 123
+ N
Sbjct: 612 VTN 614
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 98/194 (50%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G + +Y L+ Y + G + +AE VFE +K + + VL+ + +TG
Sbjct: 287 MSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQ 346
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + + M + G++ +T + NS++N Y + GQ + E++ + M + S + D TYN
Sbjct: 347 IRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNT 406
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L++ Y +AG++D+ L + K + P V+T+ + YS+ + L +++ M+ G
Sbjct: 407 LVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRG 466
Query: 181 CYPDGGTAKVLLAA 194
D + LL A
Sbjct: 467 VNADEISCSTLLEA 480
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 96/200 (48%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D+ Y +L+D Y R G + DA V ++M +G+ L++ + K+G + + E I
Sbjct: 330 DQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIF 389
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
++M LK D N++++ Y R G + ++ M + TYNIL+ Y +
Sbjct: 390 SRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRI 449
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTA 188
G + L++++ +G+ D ++ ++ + A K + ++++E ++ G D T
Sbjct: 450 GAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITL 509
Query: 189 KVLLAACSNEDQTEQVTTVI 208
V+++ ++ + ++
Sbjct: 510 NVMISGLCKMEKVNEAKEIL 529
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 6/206 (2%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 72
+++++ Y G + +A VF++M G P++ S LLS + G + +QM
Sbjct: 158 FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMI 217
Query: 73 KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENG-SCEADISTYNILINRYGQAGFI 131
+ D F + ++N Y R G K E+ E ++ TYN LIN Y G +
Sbjct: 218 SFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDV 277
Query: 132 DKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVL 191
+ M + +L+ +G+ +VVT+TS I Y KK L +FE + + D VL
Sbjct: 278 EGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVL 337
Query: 192 L-AACSNEDQTEQVTTVIRTMDKDIK 216
+ C +T Q+ +R D I+
Sbjct: 338 MDGYC----RTGQIRDAVRVHDNMIE 359
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 85/190 (44%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P +YNIL+ Y R G +D ++++ M + G+ S LL A K G+ ++ +
Sbjct: 434 PTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKL 493
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
+ GL DT LN M++ ++ + + +E+L + C+ + TY L + Y +
Sbjct: 494 WENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYK 553
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
G + + + + + KG+ P + + + I K + + ++ E+ G P T
Sbjct: 554 VGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVAT 613
Query: 188 AKVLLAACSN 197
L+ N
Sbjct: 614 YGALITGWCN 623
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 1/153 (0%)
Query: 29 AEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKS-GLKLDTFVLNSML 87
A V++ M ++P + + ++++A+ ++GNV K + S GL+L+ NS++
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 88 NLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLK 147
N Y +G M VL +M ++ TY LI Y + G +++ E +F+LL K L
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV 328
Query: 148 PDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
D + + Y + + + + MI+ G
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIG 361
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 89/210 (42%)
Query: 4 MGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSK 63
+G E + +YN L++ Y G + V M G++ + ++ L+ + K G + +
Sbjct: 255 LGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEE 314
Query: 64 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN 123
E + + + L D + +++ Y R GQ V M + + N LIN
Sbjct: 315 AEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLIN 374
Query: 124 RYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYP 183
Y ++G + + E +F ++ LKPD T+ + + Y + L++ ++M P
Sbjct: 375 GYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVP 434
Query: 184 DGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
T +LL S V ++ + M K
Sbjct: 435 TVMTYNILLKGYSRIGAFHDVLSLWKMMLK 464
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 82/191 (42%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M +G + N L++ Y ++G L +AE +F M + P ++ L+ + + G
Sbjct: 357 MIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGY 416
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V + + +QMC+ + N +L Y R+G F + + +M AD + +
Sbjct: 417 VDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCST 476
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L+ + G ++ L++ + ++GL D +T I K + EI + +
Sbjct: 477 LLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFR 536
Query: 181 CYPDGGTAKVL 191
C P T + L
Sbjct: 537 CKPAVQTYQAL 547
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 94/251 (37%), Gaps = 74/251 (29%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M +PD +YN LVD Y RAG++++A + + M + + PT+ ++ +LL +S+ G
Sbjct: 392 MNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGA 451
Query: 61 VS-------------------KCEDILNQMCK----------------SGLKLDTFVLNS 85
C +L + K GL DT LN
Sbjct: 452 FHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNV 511
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAG---------------- 129
M++ ++ + + +E+L + C+ + TY L + Y + G
Sbjct: 512 MISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKG 571
Query: 130 -------------------FIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSK----KKLY 166
++K+ L L ++GL P V T+ + I + K Y
Sbjct: 572 IFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAY 631
Query: 167 VRCLEIFEEMI 177
C E+ E+ I
Sbjct: 632 ATCFEMIEKGI 642
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 91/216 (42%), Gaps = 16/216 (7%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVF--EDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
PD + +I+V+AY R+G ++ A VF E +G+ + ++ L++ ++ G+V
Sbjct: 223 PDVFTCSIVVNAYCRSGNVDKA-MVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMT 281
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+L M + G+ + S++ Y + G + E V +++ AD Y +L++ Y
Sbjct: 282 RVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGY 341
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
+ G I + + G++ + S I Y K V +IF M D PD
Sbjct: 342 CRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDH 401
Query: 186 GTAKVL-------------LAACSNEDQTEQVTTVI 208
T L L C Q E V TV+
Sbjct: 402 HTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVM 437
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 95/192 (49%), Gaps = 6/192 (3%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C P+ +YN L+ + +A + + +F +M + G+ ++ L+ + G+ +
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVME---NGSCEADISTYNILI 122
I +M G+ D + +L+ L ++GK+E+ L V E E DI TYNI+I
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLD---GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 123 NRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCY 182
+AG ++ LF L KG+KP+V+ +T+ I + +K L +F EM + G
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 183 PDGGTAKVLLAA 194
P+ GT L+ A
Sbjct: 568 PNSGTYNTLIRA 579
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M + G P+ +YN L+ G +DA + DM I P + + L+ AF K G
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + E + ++M K + D F +S++N + + + + + +M + C ++ TYN
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI + +A +++ LF+ + +GL + VT+ + I + +IF++M+ G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
PD T +LL + E+ V + K
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 97/214 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ E D Y ++DA +NDA +F +M GI P + ++ L+ G
Sbjct: 246 MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 305
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S +L+ M + + + +++++ + + G+ + E++ M S + DI TY+
Sbjct: 306 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 365
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN + +D+ + +F+L+ SK P+VVT+ + I + K K +E+F EM G
Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 425
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
+ T L+ + + + M D
Sbjct: 426 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD 459
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 97/213 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC+PD +Y +V+ + G ++ A ++ + M++ I + + ++ A N
Sbjct: 211 MVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN 270
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V+ ++ +M G++ + NS++ G++ +L+ M ++ T++
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ + + G + + E L+ + + + PD+ T++S I + +FE MI
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
C+P+ T L+ + E+ + R M +
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 96/222 (43%), Gaps = 5/222 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M +G EPD + + L++ Y +++A A+ + M + P + L+
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 200
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S+ ++++M G + D F +++N + G +L ME G EAD+ Y
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 260
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I+ ++ LF + +KG++P+VVT+ S I + + +MI+
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTT-----VIRTMDKDIKT 217
P+ T L+ A E + + + R++D DI T
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 362
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 95/211 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ++ D SYNIL++ + R L A AV M ++G P + + LL+ +
Sbjct: 106 MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR 165
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+S+ +++QM + +T N++++ + + ++ M C+ D+ TY
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 225
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
++N + G ID L + + ++ DVV +T+ I A K L +F EM + G
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
P+ T L+ N + + ++ M
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 90/208 (43%)
Query: 4 MGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSK 63
M +P+ ++N L+ ++A A+ + M G P + ++ +++ K G++
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 64 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN 123
+L +M K ++ D + ++++ + T M+N ++ TYN LI
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 124 RYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYP 183
G L + + + P+VVT+++ I A+ K+ V ++++EMI P
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 184 DGGTAKVLLAACSNEDQTEQVTTVIRTM 211
D T L+ D+ ++ + M
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELM 386
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G PD +Y+IL+D + G L A VFE +++ + P + ++ +++ K G V
Sbjct: 460 GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG 519
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
D+ + G+K + + +M++ + R G + + + M+ + TYN LI
Sbjct: 520 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIF 173
+ G L + + S G D T + I +L LE+
Sbjct: 580 RLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 628
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 83/205 (40%), Gaps = 5/205 (2%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
++ S N+L+D L+DA +F +M + P++ LLSA +K +
Sbjct: 49 EKLSRNVLLDLK-----LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLG 103
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
+M + D + N ++N + R Q VL M E DI T + L+N Y
Sbjct: 104 ERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHG 163
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTA 188
I + L + +P+ VT+ + I + + + M+ GC PD T
Sbjct: 164 KRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTY 223
Query: 189 KVLLAACSNEDQTEQVTTVIRTMDK 213
++ + ++++ M+K
Sbjct: 224 GTVVNGLCKRGDIDLALSLLKKMEK 248
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 101/206 (49%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
EPD Y LV + RAG +++AE VF++MK GI P + ++ +++ A + G +S+ D
Sbjct: 252 EPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHD 311
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+ M SG + N+++ ++ + G+ K+ +V M+ CE D TYN LI +
Sbjct: 312 VFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHC 371
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGG 186
+ ++ + + K + + T+ + KK+ ++ +M+++ C P+
Sbjct: 372 RDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTV 431
Query: 187 TAKVLLAACSNEDQTEQVTTVIRTMD 212
T +L+ T+ V + + MD
Sbjct: 432 TYNILMRMFVGSKSTDMVLKMKKEMD 457
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 99/213 (46%), Gaps = 1/213 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ E ++ IL+ Y RAG ++A F M+ G P + +++S S+
Sbjct: 177 MKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRR 236
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S+ + + + K + D V +++ + R G+ + E+V M+ E ++ TY+I
Sbjct: 237 ASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSI 295
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I+ + G I + +F + G P+ +T+ + + + K + L+++ +M G
Sbjct: 296 VIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLG 355
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
C PD T L+ A ++ E V+ TM K
Sbjct: 356 CEPDTITYNFLIEAHCRDENLENAVKVLNTMIK 388
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 93/187 (49%), Gaps = 1/187 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ GC PD+ +++I++ R ++A++ F+ +K P + + L+ + + G
Sbjct: 212 MEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKD-RFEPDVIVYTNLVRGWCRAGE 270
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+S+ E + +M +G++ + + + +++ R GQ + +V M + C + T+N
Sbjct: 271 ISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNN 330
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L+ + +AG +K+ ++ + G +PD +T+ I A+ + + +++ MI
Sbjct: 331 LMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKK 390
Query: 181 CYPDGGT 187
C + T
Sbjct: 391 CEVNAST 397
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 86/192 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G EP+ +Y+I++DA R G ++ A VF DM G P + L+ K G
Sbjct: 281 MKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGR 340
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
K + NQM K G + DT N ++ + R +VL M CE + ST+N
Sbjct: 341 TEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNT 400
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+ + ++ ++ + +P+ VT+ + + K L++ +EM D
Sbjct: 401 IFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKE 460
Query: 181 CYPDGGTAKVLL 192
P+ T ++L+
Sbjct: 461 VEPNVNTYRLLV 472
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 95/201 (47%), Gaps = 1/201 (0%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 72
YN ++D G+ + A + + MK + ++++ +L+ + + G S+ N+M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 73 KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFID 132
G D + +++ R + + + +++ E D+ Y L+ + +AG I
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKD-RFEPDVIVYTNLVRGWCRAGEIS 272
Query: 133 KMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLL 192
+ E +F+ + G++P+V T++ I A + R ++F +M+DSGC P+ T L+
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 193 AACSNEDQTEQVTTVIRTMDK 213
+TE+V V M K
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKK 353
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 92/208 (44%), Gaps = 1/208 (0%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
GC P+ ++N L+ + +AG V+ MK++G P ++ L+ A + N+
Sbjct: 320 GCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENA 379
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+LN M K +++ N++ + + + M CE + TYNIL+
Sbjct: 380 VKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRM 439
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCY-P 183
+ + D + + + + K ++P+V T+ + + + ++F+EM++ C P
Sbjct: 440 FVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTP 499
Query: 184 DGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+++LA Q ++ ++ M
Sbjct: 500 SLSLYEMVLAQLRRAGQLKKHEELVEKM 527
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M + G EPD +YN L+ Y + G + AE + D G P ++ L+ G
Sbjct: 312 MVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGE 371
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
++ + N+ G+K + + N+++ G + ++ M ++ T+NI
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNI 431
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L+N + G + +GL +++ SKG PD+ T+ I YS + LEI + M+D+G
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
PD T LL + E V +TM
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTM 522
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 96/207 (46%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G PD+ +Y L+D G N A A+F + GI P + + L+ S G + +
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ N+M + GL + N ++N ++G + ++ VM + DI T+NILI+
Sbjct: 411 AQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
Y ++ + ++ G+ PDV T+ S + K + +E ++ M++ GC P+
Sbjct: 471 YSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPN 530
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTM 211
T +LL + + ++ ++ M
Sbjct: 531 LFTFNILLESLCRYRKLDEALGLLEEM 557
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 36/228 (15%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G P+ ++NILV+ + G ++DA+ + + M G P + + +L+ +S
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ +IL+ M +G+ D + NS+LN + +F + E M C ++ T+NI
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRI----------GAYS--------- 161
L+ + +D+ GL + + +K + PD VT+ + I GAY+
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596
Query: 162 ----------------KKKLYVRCLE-IFEEMIDSGCYPDGGTAKVLL 192
+KL V E +F+EM+D PDG T ++++
Sbjct: 597 KVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 98/215 (45%), Gaps = 4/215 (1%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G +P+ YN L+ G + +A + +M G+ P +++ +L++ K G VS
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ ++ M G D F N +++ Y + E+L VM + + D+ TYN L+N
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Query: 125 YGQAG-FIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYP 183
+ F D ME ++ + KG P++ T+ + + + + L + EEM + P
Sbjct: 506 LCKTSKFEDVME-TYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNP 564
Query: 184 DGGTAKVLL-AACSNEDQTEQVTTVIRTMDKDIKT 217
D T L+ C N D + T+ R M++ K
Sbjct: 565 DAVTFGTLIDGFCKNGD-LDGAYTLFRKMEEAYKV 598
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 92/229 (40%), Gaps = 35/229 (15%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTG- 59
M CEP SYN ++ +G+ + A V+ M+ GITP + S + + +F KT
Sbjct: 102 MDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSR 161
Query: 60 ---------NVSK--CE-----------------------DILNQMCKSGLKLDTFVLNS 85
N+S CE ++ +M SG+ L N
Sbjct: 162 PHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNK 221
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
+L + + G + E++L + ++ TYN+ I Q G +D + L +G
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAA 194
KPDV+T+ + I K + +M++ G PD T L+A
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAG 330
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 87/233 (37%), Gaps = 35/233 (15%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GCE + +Y +V + F + +F M G++ + + LL K G+
Sbjct: 172 MSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGD 231
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLN-------------------------------- 88
V +CE +L+++ K G+ + F N +
Sbjct: 232 VKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNN 291
Query: 89 -LYG--RLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
+YG + +F + E L M N E D TYN LI Y + G + E + G
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNE 198
PD T+ S I + R L +F E + G P+ L+ SN+
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQ 404
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 73/156 (46%), Gaps = 4/156 (2%)
Query: 29 AEAVFEDMKR-VGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKS--GLKLDTFVLNS 85
A +F M++ VG T+ ++ ++ G E++L M ++ L+ + +
Sbjct: 23 ALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGA 82
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
M N YGR G+ + V M+ CE + +YN +++ +G+ D+ ++ + +G
Sbjct: 83 MKN-YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG 141
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGC 181
+ PDV ++T R+ ++ K L + M GC
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGC 177
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRV-GITPTMKSHMVLLSAFSKTG 59
M++ PD ++ L+D + + G L+ A +F M+ ++ + ++ +++ AF++
Sbjct: 557 MKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKL 616
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFG-KMEEVLTVMENGSCEADISTY 118
NV+ E + +M L D + M++ + + G + +L +MENG + ++T
Sbjct: 617 NVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPS-LTTL 675
Query: 119 NILINRYGQAGFIDKMEGLFQLLHSKGLKPDVV 151
+IN + + G+ + KGL P+ V
Sbjct: 676 GRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 103/214 (48%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ E D +N ++D+ + ++DA +F++M+ GI P + ++ L+S G
Sbjct: 251 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 310
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S +L+ M + + + N++++ + + G+F + E++ M S + DI TYN
Sbjct: 311 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 370
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L+N + +DK + +F+ + SK PDVVT+ + I + K K E+F EM G
Sbjct: 371 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 430
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
D T L+ ++ + V + M D
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 464
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C PD +YN L+ + ++ + D +F +M G+ ++ L+ G+ +
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 455
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+ QM G+ D + +L+ G+ K EV M+ + DI Y +I
Sbjct: 456 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 515
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
+AG +D LF L KG+KP+VVT+ + I K+L + ++M + G P+
Sbjct: 516 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNS 575
Query: 186 GTAKVLLAACSNEDQTEQVTTVIRTM 211
GT L+ A + +IR M
Sbjct: 576 GTYNTLIRAHLRDGDKAASAELIREM 601
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 99/222 (44%), Gaps = 5/222 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M +G EP + + L++ Y ++DA A+ + M +G P + L+
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S+ ++++M + G + + ++N + G +L ME EAD+ +N
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I+ + +D LF+ + +KG++P+VVT++S I + ++ +MI+
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTT-----VIRTMDKDIKT 217
P+ T L+ A E + + + R++D DI T
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFT 367
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 85/211 (40%), Gaps = 35/211 (16%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G P+ +Y+ L+ G +DA + DM I P + + L+ AF K G
Sbjct: 286 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 345
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ E + + M K + D F NS++N + + K +++ M + C D+ TYN
Sbjct: 346 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 405
Query: 121 LINRYGQA-----------------------------------GFIDKMEGLFQLLHSKG 145
LI + ++ G D + +F+ + S G
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
+ PD++T++ + + LE+F+ M
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 88/184 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ +G PD +++IL D Y A V+E G+ + +LL+A K G
Sbjct: 310 MKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGK 369
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ K E+IL + GL + + N+M++ Y R G + ME + D YN
Sbjct: 370 IEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNC 429
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI R+ + G ++ E + KG+ P V T+ IG Y +K + +C +I +EM D+G
Sbjct: 430 LIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG 489
Query: 181 CYPD 184
P+
Sbjct: 490 TMPN 493
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 35/233 (15%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G +PD +YN L+ + G + +AE MK G++P+++++ +L+ + +
Sbjct: 415 MEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYE 474
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMEN------------ 108
KC DIL +M +G + +++N + + + + V ME+
Sbjct: 475 FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNM 534
Query: 109 ---GSC--------------------EADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
G C E ++ TYN LI+ G + + E L + KG
Sbjct: 535 LIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG 594
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNE 198
LKPDV T+ S I Y RC+ ++EEM SG P T +L++ C+ E
Sbjct: 595 LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKE 647
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 4/208 (1%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G +PD +YN L+ YG AG + A++E+MKR GI PT+K++ +L+S +K G +
Sbjct: 594 GLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELT 652
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
E + +M LK D V N +L+ Y G K + M S D +TYN LI
Sbjct: 653 ERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILG 709
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ G + ++ L ++++ ++P+ T+ + + + K Y+ + EM + G D
Sbjct: 710 QLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLD 769
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTMD 212
L++ E ++++ VI M+
Sbjct: 770 VCIGNELVSGLKEEWRSKEAEIVISEMN 797
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 36/216 (16%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+H P YN+L+D + +NDAE +F++M + P++ ++ L+ + K GN
Sbjct: 205 MKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGN 264
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
K + +M K D E + T+N
Sbjct: 265 PEKSFKVRERM-----KADHI------------------------------EPSLITFNT 289
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L+ +AG ++ E + + + G PD T++ YS + L ++E +DSG
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG 349
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVI-RTMDKDI 215
+ T +LL A E + E+ ++ R M K +
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGL 385
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 84/204 (41%), Gaps = 1/204 (0%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM 71
SY +L + +++A +F ++ GI P+ S +LL KT ++ +
Sbjct: 111 SYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNI 170
Query: 72 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
+S + F+ + +L GK E+ M++ + YN+LI+ + +
Sbjct: 171 LESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRM 230
Query: 132 DKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVL 191
+ E LF + ++ L P ++T+ + I Y K + ++ E M P T L
Sbjct: 231 NDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTL 290
Query: 192 LAACSNEDQTEQVTTVIRTMDKDI 215
L E V++ M KD+
Sbjct: 291 LKGLFKAGMVEDAENVLKEM-KDL 313
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 96/213 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G D +YN L+ +G DA + DM + I P + L+ F K GN
Sbjct: 210 MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 269
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + ++ +M + + + F NS++N + G G + + +M + C D+ TYN
Sbjct: 270 LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNT 329
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI + ++ ++ LF + +GL D T+ + I Y + ++F M+D G
Sbjct: 330 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 389
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
PD T +LL N + E+ ++ + K
Sbjct: 390 VSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 6/186 (3%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC PD +YN L+ + ++ + D +F +M G+ ++ L+ + + G
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMEN---GSCEADIST 117
++ + + N+M G+ D N +L+ L GK+E+ L ++E+ + DI T
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTYNILLDC---LCNNGKIEKALVMVEDLQKSEMDVDIIT 431
Query: 118 YNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
YNI+I + + + LF+ L KG+KPD + + + I +K L ++ M
Sbjct: 432 YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 491
Query: 178 DSGCYP 183
+ G P
Sbjct: 492 EDGFMP 497
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G P+ YN +++ + LN+A VF M++ GI ++ L+S S +G
Sbjct: 175 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 234
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ +L M K + + ++++ + + G + + M S ++ TYN
Sbjct: 235 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 294
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN + G + + +F L+ SKG PDVVT+ + I + K K +++F EM G
Sbjct: 295 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 354
Query: 181 CYPDGGTAKVLL 192
D T L+
Sbjct: 355 LVGDAFTYNTLI 366
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 91/207 (43%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P+ +YN L++ + G L DA+ +F+ M G P + ++ L++ F K+ V +
Sbjct: 287 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 346
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
+M GL D F N++++ Y + G+ ++V M + DI TYNIL++
Sbjct: 347 FCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 406
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
G I+K + + L + D++T+ I + +F + G PD
Sbjct: 407 NGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIA 466
Query: 188 AKVLLAACSNEDQTEQVTTVIRTMDKD 214
+++ + + + R M +D
Sbjct: 467 YITMISGLCRKGLQREADKLCRRMKED 493
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 87/192 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+++G D S+ IL+ + R L+ A A+ M ++G P++ + LL+ F +
Sbjct: 105 MENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNR 164
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ +++ M G + + N+++N + EV ME AD TYN
Sbjct: 165 FQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 224
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ +G L + + + + P+V+ +T+ I + K+ + +++EMI
Sbjct: 225 LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 284
Query: 181 CYPDGGTAKVLL 192
P+ T L+
Sbjct: 285 VVPNVFTYNSLI 296
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 99/203 (48%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C+P +Y IL++A G +++A + ++M G+ P M ++ ++ K G V +
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 283
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+++ + G + D N +L G++ + E+++T M + C+ ++ TY+ILI
Sbjct: 284 EMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
+ G I++ L +L+ KGL PD ++ I A+ ++ +E E MI GC PD
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403
Query: 186 GTAKVLLAACSNEDQTEQVTTVI 208
+LA + +Q +
Sbjct: 404 VNYNTVLATLCKNGKADQALEIF 426
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ PD +YNI++ + G L+ A V + PT+ ++ +L+ A G
Sbjct: 184 MRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGG 243
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V + ++++M GLK D F N+++ + G + E++ +E CE D+ +YNI
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L+ G ++ E L + S+ P+VVT++ I + + + + M + G
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
PD + L+AA E + + + TM D
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 91/207 (43%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
GCEPD SYNIL+ A G + E + M P + ++ +L++ + G + +
Sbjct: 293 GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEA 352
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
++L M + GL D + + ++ + R G+ E L M + C DI YN ++
Sbjct: 353 MNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLAT 412
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ G D+ +F L G P+ ++ + A +R L + EM+ +G PD
Sbjct: 413 LCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPD 472
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTM 211
T +++ E ++ ++ M
Sbjct: 473 EITYNSMISCLCREGMVDEAFELLVDM 499
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 2/193 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G PD SY+ L+ A+ R G L+ A E M G P + ++ +L+ K G
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLN-LYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
+ +I ++ + G ++ N+M + L+ + + +L +M NG + D TYN
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG-IDPDEITYN 477
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
+I+ + G +D+ L + S P VVT+ + + K + + E M+ +
Sbjct: 478 SMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGN 537
Query: 180 GCYPDGGTAKVLL 192
GC P+ T VL+
Sbjct: 538 GCRPNETTYTVLI 550
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 7/206 (3%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G PD L+ + + A V E +++ G P + ++ L++ F K
Sbjct: 115 MVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNR 173
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVME---NGSCEADIST 117
+ +L++M DT N M+ G L GK++ L V+ + +C+ + T
Sbjct: 174 IDDATRVLDRMRSKDFSPDTVTYNIMI---GSLCSRGKLDLALKVLNQLLSDNCQPTVIT 230
Query: 118 YNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
Y ILI G +D+ L + S+GLKPD+ T+ + I K+ + R E+ +
Sbjct: 231 YTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLE 290
Query: 178 DSGCYPDGGTAKVLLAACSNEDQTEQ 203
GC PD + +LL A N+ + E+
Sbjct: 291 LKGCEPDVISYNILLRALLNQGKWEE 316
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 1/191 (0%)
Query: 22 RAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTF 81
R+G ++ + E M R G P + L+ F N+ K ++ + K G + D F
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159
Query: 82 VLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLL 141
N+++N + ++ + VL M + D TYNI+I G +D + L
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 142 HSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQT 201
S +P V+T+T I A + L++ +EM+ G PD T ++ E
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 202 EQVTTVIRTMD 212
++ ++R ++
Sbjct: 280 DRAFEMVRNLE 290
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 98/212 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ MG PD YN ++D + G +NDA +F+ M+R G+ ++ L++ +G
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S ++ M + + ++++++ + G+F + ++ M + D+ TYN
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN G +D+ + + L+ +KG PDVVT+ + I + K K ++F EM G
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMD 212
D T ++ + + + MD
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMD 376
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 100/182 (54%), Gaps = 9/182 (4%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
GC PD +YN L++ + ++ +++ +F +M + G+ ++ ++ + + G
Sbjct: 309 GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA 368
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMEN---GSCEADISTYNIL 121
++I ++M S + T+ S+L LYG L ++E+ L + EN E DI+TYNI+
Sbjct: 369 QEIFSRM-DSRPNIRTY---SIL-LYG-LCMNWRVEKALVLFENMQKSEIELDITTYNIV 422
Query: 122 INRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGC 181
I+ + G ++ LF+ L KGLKPDVV++T+ I + +K+ + + ++ +M + G
Sbjct: 423 IHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Query: 182 YP 183
P
Sbjct: 483 LP 484
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 68/169 (40%)
Query: 43 PTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEV 102
P++ +LS +K+ N + + M G+ D + N ++N R +F V
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 103 LTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSK 162
+ M E D+ T + LIN + Q + L + G +PDVV + + I K
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 163 KKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
L +E+F+ M G D T L+A + ++R M
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 11/225 (4%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
++ G P+ +Y LV+ + +DA + DM + ITP + ++ LL AF K G
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLN---LYGRLGQFGKMEEVLTVMENGSCEADIST 117
V + +++ +M + + D +S++N L+ R+ + +M +M + C AD+ +
Sbjct: 276 VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM---FDLMVSKGCLADVVS 332
Query: 118 YNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
YN LIN + +A ++ LF+ + +GL + VT+ + I + + + E F +M
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392
Query: 178 DSGCYPDGGTAKVLLAACSNEDQTEQVTTVI-----RTMDKDIKT 217
G PD T +LL + + E+ + R MD DI T
Sbjct: 393 FFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 437
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 101/212 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M +G +PD +YN ++D+ + +NDA F++++R GI P + ++ L++ +
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S +L+ M K + + +++L+ + + G+ + +E+ M S + DI TY+
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN ID+ +F L+ SKG DVV++ + I + K K +++F EM G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMD 212
+ T L+ ++ MD
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 6/183 (3%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC D SYN L++ + +A + D +F +M + G+ ++ L+ F + G+
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTV---MENGSCEADIST 117
V K ++ +QM G+ D + N +L G L G++E+ L + M+ + DI T
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILL---GGLCDNGELEKALVIFEDMQKREMDLDIVT 437
Query: 118 YNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
Y +I + G +++ LF L KGLKPD+VT+T+ + K L ++ +M
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497
Query: 178 DSG 180
G
Sbjct: 498 QEG 500
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 98/213 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M +G EPDR + LV+ + R ++DA ++ + M +G P + ++ ++ + KT
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 205
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V+ D ++ + G++ + +++N ++ +L+ M ++ TY+
Sbjct: 206 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSA 265
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L++ + + G + + + LF+ + + PD+VT++S I ++F+ M+ G
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
C D + L+ + E + R M +
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 94/214 (43%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M M +PD +Y+ L++ +++A +F+ M G + S+ L++ F K
Sbjct: 286 MVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKR 345
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V + +M + GL +T N+++ + + G K +E + M+ DI TYNI
Sbjct: 346 VEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNI 405
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L+ G ++K +F+ + + + D+VT+T+ I K +F + G
Sbjct: 406 LLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKG 465
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
PD T +++ + +V + M ++
Sbjct: 466 LKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 93/211 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ +G D ++NI+++ + ++ A ++ M ++G P + L++ F +
Sbjct: 111 MEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 170
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
VS ++++M + G K D N++++ + + + +E ++ TY
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 230
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L+N + L + K + P+V+T+++ + A+ K + E+FEEM+
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 290
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
PD T L+ D+ ++ + M
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 82/187 (43%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P +N L+ A + + ++ + M+ +GI + + ++++ F VS I
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
L +M K G + D + S++N + R + ++ M + DI YN +I+ +
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
++ F+ + KG++P+VVT+T+ + + + +MI P+ T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 188 AKVLLAA 194
LL A
Sbjct: 263 YSALLDA 269
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 74/188 (39%)
Query: 26 LNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNS 85
LNDA +F DM + P++ LLSA K + +M G++ D + N
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
++N + Q +L M E D T L+N + + + L + G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVT 205
KPD+V + + I + K K + F+E+ G P+ T L+ N +
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 206 TVIRTMDK 213
++ M K
Sbjct: 246 RLLSDMIK 253
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 98/194 (50%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ P S N L+ + + G +D + F+DM G PT+ ++ +++ K G+
Sbjct: 218 MKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGD 277
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V + +M GL DT NSM++ +G++G+ M++ CE D+ TYN
Sbjct: 278 VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 337
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN + + G + ++ + GLKP+VV++++ + A+ K+ + + ++ + +M G
Sbjct: 338 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 397
Query: 181 CYPDGGTAKVLLAA 194
P+ T L+ A
Sbjct: 398 LVPNEYTYTSLIDA 411
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 85/157 (54%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G +P+ SY+ LVDA+ + G + A + DM+RVG+ P ++ L+ A K GN
Sbjct: 358 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+S + N+M + G++ + ++++ + + EE+ M+ ++++YN
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 477
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRI 157
LI+ + +A +D+ L L +G+KPD++ + + I
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ M CEPD +YN L++ + + G L + +MK G+ P + S+ L+ AF K G
Sbjct: 323 MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 382
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + M + GL + + S+++ ++G + M E ++ TY
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 442
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ A + + E LF + + G+ P++ ++ + I + K K R LE+ E+ G
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 502
Query: 181 CYPD 184
PD
Sbjct: 503 IKPD 506
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 81/198 (40%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C P ++ L G L +A F MKR + P +S LL F+K G +
Sbjct: 188 CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVK 247
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
M +G + F N M++ + G + M+ D TYN +I+ +
Sbjct: 248 RFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 307
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
G+ G +D F+ + +PDV+T+ + I + K LE + EM +G P+
Sbjct: 308 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 367
Query: 186 GTAKVLLAACSNEDQTEQ 203
+ L+ A E +Q
Sbjct: 368 VSYSTLVDAFCKEGMMQQ 385
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 5/214 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M +G E + +Y L+D A + +AE +F M G+ P + S+ L+ F K N
Sbjct: 428 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 487
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + ++LN++ G+K D + + + L + + V+ M+ +A+ Y
Sbjct: 488 MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 547
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPD--VVTWTSRIGAYSKKKLYVRCLEIFEEMI- 177
L++ Y ++G + EGL L K L + VVT+ I K KL + ++ F +
Sbjct: 548 LMDAYFKSG--NPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN 605
Query: 178 DSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
D G + ++ ++Q E TT+ M
Sbjct: 606 DFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQM 639
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 1/185 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G + + Y L+DAY ++G + + ++MK + I T+ + VL+ K
Sbjct: 533 MKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKL 592
Query: 61 VSKCEDILNQMCKS-GLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
VSK D N++ GL+ + + +M++ + Q + M D + Y
Sbjct: 593 VSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYT 652
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
L++ + G + + L + G+K D++ +TS + S + EEMI
Sbjct: 653 SLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGE 712
Query: 180 GCYPD 184
G +PD
Sbjct: 713 GIHPD 717
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 104/213 (48%), Gaps = 1/213 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKT-G 59
M+ C+P + +Y ++ LN A +++M+ +G+ PT+ S VL+ A + G
Sbjct: 112 MKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDG 171
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
V I +M K G D++ ++++ R G+ + +++ T M C + TY
Sbjct: 172 TVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYT 231
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
LIN + +D+ + + SKG++P+V T++S + K ++ +E+FE M+
Sbjct: 232 SLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMAR 291
Query: 180 GCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMD 212
GC P+ T L+ E + ++ ++ M+
Sbjct: 292 GCRPNMVTYTTLITGLCKEQKIQEAVELLDRMN 324
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 104/221 (47%), Gaps = 11/221 (4%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G EP+ +Y+ L+D + G A +FE M G P M ++ L++ K
Sbjct: 253 MKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQK 312
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + ++L++M GLK D + +++ + + +F + L M G + T+NI
Sbjct: 313 IQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNI 372
Query: 121 LINRYGQ------AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFE 174
+ + A + + L+ + S+G+ +V T S + KK + + +++ +
Sbjct: 373 HVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVD 432
Query: 175 EMIDSGCYPDGGTAKVLLAACSNEDQT---EQVTTVIRTMD 212
E++ GC P GT K+L+ D+T E T++R +D
Sbjct: 433 EIVTDGCIPSKGTWKLLIG--HTLDKTIVGEASDTLLRDLD 471
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 1/198 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC+PD +Y L+ R G +++A+ +F +M PT+ ++ L++ + N
Sbjct: 183 MPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKN 242
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V + L +M G++ + F +S+++ + G+ + E+ +M C ++ TY
Sbjct: 243 VDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTT 302
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI + I + L ++ +GLKPD + I + + +EMI G
Sbjct: 303 LITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGG 362
Query: 181 CYPDGGTAKVLLAACSNE 198
P+ T + + SNE
Sbjct: 363 ITPNRLTWNIHVKT-SNE 379
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 96/206 (46%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C PD +YN L+ + + + + VF +M + G+ ++ +L+ + G+ +
Sbjct: 392 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 451
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+I +M G+ + N++L+ + G+ K V ++ E I TYNI+I
Sbjct: 452 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
+AG ++ LF L KG+KPDVV + + I + +K +F+EM + G P+
Sbjct: 512 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 571
Query: 186 GTAKVLLAACSNEDQTEQVTTVIRTM 211
G L+ A + E +I+ M
Sbjct: 572 GCYNTLIRARLRDGDREASAELIKEM 597
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 101/214 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ EP YN ++D + ++DA +F++M+ GI P + ++ L+S G
Sbjct: 247 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 306
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S +L+ M + + D F +++++ + + G+ + E++ M S + I TY+
Sbjct: 307 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 366
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN + +D+ + +F+ + SK PDVVT+ + I + K K +E+F EM G
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 426
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
+ T +L+ + + + M D
Sbjct: 427 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 460
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 98/211 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ++G + +Y+IL++ + R L A AV M ++G P + + LL+ + +
Sbjct: 107 MQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 166
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+S+ +++QM +G + +T N++++ + + ++ M C+ D+ TY +
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 226
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
++N + G D L + L+P V+ + + I K K L +F+EM G
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 286
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
P+ T L++ N + + ++ M
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 89/185 (48%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
PD +++ L+DA+ + G L +AE ++++M + I P++ ++ L++ F + + + +
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
M D N+++ + + + + EV M + TYNILI Q
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
AG D + +F+ + S G+ P+++T+ + + K + + +FE + S P T
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 188 AKVLL 192
+++
Sbjct: 504 YNIMI 508
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 79/188 (42%)
Query: 26 LNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNS 85
L+DA A+F +M + P++ LLSA +K + QM G+ + + +
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
++N + R Q VL M E +I T + L+N Y + I + L + G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVT 205
+P+ VT+ + I + + + M+ GC PD T V++ T+
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 206 TVIRTMDK 213
++ M++
Sbjct: 242 NLLNKMEQ 249
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 66/148 (44%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G P+ +YN L+D + G L A VFE ++R + PT+ ++ +++ K G V
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
D+ + G+K D N+M++ + R G + + + M+ + YN LI
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVT 152
+ G + L + + S G D T
Sbjct: 581 RLRDGDREASAELIKEMRSCGFAGDAST 608
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 102/197 (51%), Gaps = 6/197 (3%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
GC P SYNIL+ +AG +A A ++M G P +K++ +LL + +
Sbjct: 494 GCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLA 553
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTV---MENGSCEADISTYNIL 121
++ +Q +SGL+ D + N +++ L GK+++ +TV ME+ +C A++ TYN L
Sbjct: 554 LELWHQFLQSGLETDVMMHNILIH---GLCSVGKLDDAMTVMANMEHRNCTANLVTYNTL 610
Query: 122 INRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGC 181
+ + + G ++ ++ ++ GL+PD++++ + + + +E F++ + G
Sbjct: 611 MEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGI 670
Query: 182 YPDGGTAKVLLAACSNE 198
+P T +L+ A N
Sbjct: 671 FPTVYTWNILVRAVVNR 687
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 11/216 (5%)
Query: 4 MGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSK 63
GCEP SYN L++A+ A E++F + G+ P ++++ VL+ K K
Sbjct: 108 FGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEK 167
Query: 64 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN 123
L+ M K G K D F ++++N + G+ E+ M D++ YNILI+
Sbjct: 168 ARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILID 227
Query: 124 RYGQAGFIDK------MEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
GF+ + ME +LL + P+V T I SK CL+I+E M
Sbjct: 228 -----GFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMK 282
Query: 178 DSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
+ D T L+ + ++ +V +D+
Sbjct: 283 QNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDE 318
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 99/206 (48%), Gaps = 1/206 (0%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P+ ++NI++ + G ++D ++E MK+ + ++ L+ GNV K E +
Sbjct: 253 PNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESV 312
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
N++ + +D N+ML + R G+ + E+ +ME+ + +I +YNILI +
Sbjct: 313 FNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLE 371
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
G ID+ +++L+ +KG D T+ I + L + +E+ SG + D
Sbjct: 372 NGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYA 431
Query: 188 AKVLLAACSNEDQTEQVTTVIRTMDK 213
++ + + E+ + +++ M K
Sbjct: 432 YASIIDCLCKKKRLEEASNLVKEMSK 457
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 95/212 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G D+ +Y I + G++N A V ++++ G + ++ ++ K
Sbjct: 385 MPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKR 444
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + +++ +M K G++L++ V N+++ R + G+ L M C + +YNI
Sbjct: 445 LEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNI 504
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI +AG + + + G KPD+ T++ + + + LE++ + + SG
Sbjct: 505 LICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSG 564
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMD 212
D +L+ + + + TV+ M+
Sbjct: 565 LETDVMMHNILIHGLCSVGKLDDAMTVMANME 596
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 78/187 (41%), Gaps = 12/187 (6%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM 71
SYNIL+ G +++A ++ M G ++ + + G V+K ++ ++
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEV 420
Query: 72 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILI------NRY 125
SG LD + S+++ + + + ++ M E + N LI +R
Sbjct: 421 ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRL 480
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
G+A F + G G +P VV++ I K + +EM+++G PD
Sbjct: 481 GEASFFLREMG------KNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDL 534
Query: 186 GTAKVLL 192
T +LL
Sbjct: 535 KTYSILL 541
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 85/161 (52%)
Query: 4 MGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSK 63
+G EP+ YN ++D+ G +N A V + MK++GI P + ++ L++ +G
Sbjct: 178 LGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGV 237
Query: 64 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN 123
IL+ M + G+ D ++++++YG+ GQ + ++ M S +I TYN LIN
Sbjct: 238 SARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLIN 297
Query: 124 RYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKK 164
G +D+ + + +L SKG P+ VT+ + I Y K K
Sbjct: 298 GLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAK 338
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 89/192 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ MG PD +YN L+ +G + + DM R+GI+P + + L+ + K G
Sbjct: 210 MKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQ 269
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + + N+M + + + NS++N G + ++VL V+ + + TYN
Sbjct: 270 LLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNT 329
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN Y +A +D + ++ G+ D T+ + Y + + ++ M+ G
Sbjct: 330 LINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCG 389
Query: 181 CYPDGGTAKVLL 192
+PD T +LL
Sbjct: 390 VHPDMYTFNILL 401
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 82/172 (47%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G P+ +YN L++ Y +A ++D + M R G+ ++ L + + G S
Sbjct: 319 GFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAA 378
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
E +L +M G+ D + N +L+ G+ GK L ++ I TYNI+I
Sbjct: 379 EKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKG 438
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
+A ++ LF L KG+ PDV+T+ + + +K+L+ E++ +M
Sbjct: 439 LCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKM 490
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 95/214 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M +G EP ++ LV+ + +A ++ + + +G P + + ++ + + G
Sbjct: 140 MMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQ 199
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V+ D+L M K G++ D NS++ G +G +L+ M D+ T++
Sbjct: 200 VNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSA 259
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ YG+ G + + + + + + + P++VT+ S I L ++ ++ G
Sbjct: 260 LIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKG 319
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
+P+ T L+ + + ++ M +D
Sbjct: 320 FFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRD 353
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 77/178 (43%), Gaps = 3/178 (1%)
Query: 26 LNDAEAV---FEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFV 82
LN EAV F ++ +GI+ + S L+ F + +S L +M K G +
Sbjct: 92 LNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVT 151
Query: 83 LNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLH 142
S++N + + +F + ++ + E ++ YN +I+ + G ++ + + +
Sbjct: 152 FGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMK 211
Query: 143 SKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQ 200
G++PDVVT+ S I + I +M+ G PD T L+ E Q
Sbjct: 212 KMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQ 269
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C PD +YN L+ + ++ + D +F +M G+ ++ L+ G+ +
Sbjct: 321 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 380
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+ QM G+ D + +L+ G+ K EV M+ + DI Y +I
Sbjct: 381 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 440
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
+AG +D LF L KG+KP+VVT+ + I K+L + ++M + G PD
Sbjct: 441 CKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDS 500
Query: 186 GTAKVLLAACSNEDQTEQVTTVIRTM 211
GT L+ A + +IR M
Sbjct: 501 GTYNTLIRAHLRDGDKAASAELIREM 526
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 102/214 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ E D +N ++D+ + ++DA +F++M+ GI P + ++ L+S G
Sbjct: 176 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 235
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S +L+ M + + + N++++ + + G+F + E++ M S + DI TYN
Sbjct: 236 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 295
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN + +DK + +F+ + SK PD+ T+ + I + K K E+F EM G
Sbjct: 296 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
D T L+ ++ + V + M D
Sbjct: 356 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 389
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 114/257 (44%), Gaps = 40/257 (15%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ +G + +YNIL++ + R ++ A A+ M ++G P++ + LL+ +
Sbjct: 36 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 95
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLN-------------LYGRLGQFGKMEEVLT--V 105
+S +++QM + G + DT ++++ L R+ Q G ++T V
Sbjct: 96 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 155
Query: 106 MENGSC--------------------EADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
+ NG C EAD+ +N +I+ + +D LF+ + +KG
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVT 205
++P+VVT++S I + ++ +MI+ P+ T L+ A E + +
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 206 T-----VIRTMDKDIKT 217
+ R++D DI T
Sbjct: 276 KLHDDMIKRSIDPDIFT 292
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 85/211 (40%), Gaps = 35/211 (16%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G P+ +Y+ L+ G +DA + DM I P + + L+ AF K G
Sbjct: 211 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 270
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ E + + M K + D F NS++N + + K +++ M + C D+ TYN
Sbjct: 271 FVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNT 330
Query: 121 LINRYGQA-----------------------------------GFIDKMEGLFQLLHSKG 145
LI + ++ G D + +F+ + S G
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
+ PD++T++ + + LE+F+ M
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 95/213 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G P++ L++ Y + G + +A + + M GI K++ VL++ K
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V E+I +M G+ D F ++N + +LG K + M ++ YN+
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L+ + ++G I+K + L + KGL P+ VT+ + I Y K +F+EM G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
PD L+ C + E+ T+ T K
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK 760
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 121/284 (42%), Gaps = 73/284 (25%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G PD SY +L++ + + G + A ++F++M G+TP + + +LL F ++G
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 61 VSKCEDILNQM-------------------CKSG-----------LKL-----DTFVLNS 85
+ K +++L++M CKSG +KL D+FV +
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737
Query: 86 MLNLYGRLG-------------------------------QFGKME---EVLTVMENGSC 111
+++ RL +FGK E EVL + +GS
Sbjct: 738 LVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSF 797
Query: 112 E----ADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYV 167
+ + TYNI+I+ + G ++ + LF + + L P V+T+TS + Y K
Sbjct: 798 DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRA 857
Query: 168 RCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+F+E I +G PD V++ A E T + ++ M
Sbjct: 858 EMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 97/242 (40%), Gaps = 35/242 (14%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
GC P+ Y L+ + + DA V ++MK GI P + + L+ SK + +
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMEN---------------- 108
L +M ++GLK + F + ++ Y +F ++ + M
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566
Query: 109 --------GSCEA-----------DISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPD 149
+C A D TY +L+N + +D E +F+ + KG+ PD
Sbjct: 567 YCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPD 626
Query: 150 VVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIR 209
V ++ I +SK + IF+EM++ G P+ +LL + E+ ++
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686
Query: 210 TM 211
M
Sbjct: 687 EM 688
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 85/203 (41%), Gaps = 1/203 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G +P+ +Y + Y A A+ ++M+ G+ P L++ + K G
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V + M G+ D ++N + + EE+ M D+ +Y +
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN + + G + K +F + +GL P+V+ + +G + + + E+ +EM G
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 181 CYPDGGT-AKVLLAACSNEDQTE 202
+P+ T ++ C + D E
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAE 715
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 84/194 (43%), Gaps = 4/194 (2%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G P +Y L++ Y R + + +MK+ I + ++ ++ +G++
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+I+ +M SG + + + +++ + + +FG VL M+ DI YN LI
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+A +D+ + GLKP+ T+ + I Y + + + +EM + G P+
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Query: 185 GGTAKVLLAACSNE 198
KVL NE
Sbjct: 557 ----KVLCTGLINE 566
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 78/200 (39%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM 71
+Y +V +G L+ A + ++M G P + + L+ F + +L +M
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 72 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
+ G+ D F NS++ + + + L M + + TY I+ Y +A
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 132 DKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVL 191
+ + + G+ P+ V T I Y KK + + M+D G D T VL
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598
Query: 192 LAACSNEDQTEQVTTVIRTM 211
+ D+ + + R M
Sbjct: 599 MNGLFKNDKVDDAEEIFREM 618
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 78/176 (44%), Gaps = 2/176 (1%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 72
Y+ + + G + A+A+F+ M G+ P +++ L+ + + NV + ++L +M
Sbjct: 350 YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMK 409
Query: 73 KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ-AGFI 131
K + + + +++ G ++ M C ++ Y LI + Q + F
Sbjct: 410 KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFG 469
Query: 132 DKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
D M L ++ +G+ PD+ + S I SK K EM+++G P+ T
Sbjct: 470 DAMRVLKEM-KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFT 524
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 89/211 (42%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M +G D +Y++L+D + + A+ + +M GI + + SK G
Sbjct: 303 MDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGV 362
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ K + + + M SGL S++ Y R + E+L M+ + TY
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT 422
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
++ +G +D + + + + G +P+VV +T+ I + + + + + +EM + G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
PD L+ S + ++ + + M
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 101/211 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G D +YN L+ Y + G + A + +M R G+TP++ ++ L+ + K GN
Sbjct: 301 MNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGN 360
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+++ + L+QM GL + ++++ + + G + VL M + + TYN
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 420
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN + G ++ + + + KGL PDVV++++ + + + L + EM++ G
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
PD T L+ + +T++ + M
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G P+ +Y LVD + + G++N+A V +M G +P++ ++ L++ TG
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ +L M + GL D +++L+ + R + V M + D TY+
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI + + + L++ + GL PD T+T+ I AY + + L++ EM++ G
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVI 208
PD T VL+ + + +T + ++
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLL 578
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 104/206 (50%), Gaps = 6/206 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G P +Y L+ + +AG +N A + M+ G+ P +++ L+ FS+ G
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMEN---GSCEADIST 117
+++ +L +M +G N+++N + G KME+ + V+E+ D+ +
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG---KMEDAIAVLEDMKEKGLSPDVVS 452
Query: 118 YNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
Y+ +++ + ++ +D+ + + + KG+KPD +T++S I + +++ +++EEM+
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 178 DSGCYPDGGTAKVLLAACSNEDQTEQ 203
G PD T L+ A E E+
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEK 538
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 94/211 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ GC P+ +YN L+D Y + ++D + M G+ P + S+ V+++ + G
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + +L +M + G LD N+++ Y + G F + + M + TY
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ +AG +++ + +GL P+ T+T+ + +S+K + EM D+G
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
P T L+ + E V+ M
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 101/263 (38%), Gaps = 50/263 (19%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G P +YN L++ + G + DA AV EDMK G++P + S+ +LS F ++ +
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465
Query: 61 VSK---------------------------CE--------DILNQMCKSGLKLDTFVLNS 85
V + CE D+ +M + GL D F +
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG-QAGFIDKMEGLFQLLHSK 144
++N Y G K ++ M D+ TY++LIN Q+ + L +L + +
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585
Query: 145 GLKPDVVTWT--------------SRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKV 190
+ DV T S I + K + ++FE M+ PDG +
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNI 645
Query: 191 LLAACSNEDQTEQVTTVIRTMDK 213
++ + T+ + M K
Sbjct: 646 MIHGHCRAGDIRKAYTLYKEMVK 668
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 91/183 (49%), Gaps = 1/183 (0%)
Query: 2 QHMGCEPDRASYNILVDAYGRAGF-LNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
Q G P SYN ++DA R+ ++ AE VF++M ++P + ++ +L+ F GN
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGN 220
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + ++M G + N++++ Y +L + ++L M E ++ +YN+
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNV 280
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+IN + G + ++ + ++ +G D VT+ + I Y K+ + + L + EM+ G
Sbjct: 281 VINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340
Query: 181 CYP 183
P
Sbjct: 341 LTP 343
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 99/223 (44%), Gaps = 15/223 (6%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G +PD +Y+ L+ + +A ++E+M RVG+ P ++ L++A+ G+
Sbjct: 476 MVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD 535
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVL-TVMENGSCEADISTYN 119
+ K + N+M + G+ D + ++N + + + + +L + S +D++ +
Sbjct: 536 LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHT 595
Query: 120 I--------------LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKL 165
+ LI + G + + + +F+ + K KPD + I + +
Sbjct: 596 LIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGD 655
Query: 166 YVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVI 208
+ +++EM+ SG T L+ A E + ++ +VI
Sbjct: 656 IRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVI 698
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 86/199 (43%), Gaps = 1/199 (0%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTG-NVSKC 64
C + ++++V +Y R ++ A ++ + G P + S+ +L A ++ N+S
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFA 189
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
E++ +M +S + + F N ++ + G + ME C ++ TYN LI+
Sbjct: 190 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 249
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
Y + ID L + + KGL+P+++++ I ++ + EM G D
Sbjct: 250 YCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLD 309
Query: 185 GGTAKVLLAACSNEDQTEQ 203
T L+ E Q
Sbjct: 310 EVTYNTLIKGYCKEGNFHQ 328
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 107/208 (51%), Gaps = 1/208 (0%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
DR + NIL+++ +AG +N A +++ + I ++ ++ F KTG ++ + +L
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
+M S L+ F N +L+ + G + + M+ + D+ ++NI+I+ +A
Sbjct: 518 CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKA 577
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTA 188
G I E L + GL PD+ T++ I + K + F++M+DSG PD
Sbjct: 578 GDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHIC 637
Query: 189 KVLLAACSNEDQTEQVTTVIRTM-DKDI 215
+L C ++ +T+++T +++ + DKDI
Sbjct: 638 DSVLKYCISQGETDKLTELVKKLVDKDI 665
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 96/214 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ GC ++ IL+DA+ +AG +++A ++MK +G+ + + L+ F G
Sbjct: 203 MKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGE 262
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + + + +++ + G N+++ + +LGQ + E+ M ++ TY
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTG 322
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ G + L L+ K +P+ VT+ I K L +EI E M
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRR 382
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
PD T +LL + ++ + ++ M KD
Sbjct: 383 TRPDNITYNILLGGLCAKGDLDEASKLLYLMLKD 416
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 95/209 (45%), Gaps = 2/209 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ MG E D Y L+ + G L+ +A+F+++ G +P ++ L+ F K G
Sbjct: 238 MKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQ 297
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + +I M + G++ + + +++ +G+ + ++L +M E + TYNI
Sbjct: 298 LKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNI 357
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+IN+ + G + + +L+ + +PD +T+ +G K ++ M+
Sbjct: 358 IINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDS 417
Query: 181 CY--PDGGTAKVLLAACSNEDQTEQVTTV 207
Y PD + L+ E++ Q +
Sbjct: 418 SYTDPDVISYNALIHGLCKENRLHQALDI 446
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 94/214 (43%), Gaps = 2/214 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ PD SYN ++ + L A + +MK G + ++ + +L+ AF K G
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVL-TVMENGSCEADISTYN 119
+ + L +M GL+ D V S++ + G+ + + + V+E G I TYN
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI-TYN 286
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
LI + + G + + +F+ + +G++P+V T+T I L++ MI+
Sbjct: 287 TLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK 346
Query: 180 GCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
P+ T +++ + ++ M K
Sbjct: 347 DEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM 71
++NIL+ R A ++ +M+R + P + S+ ++ F + + K ++ N+M
Sbjct: 144 NHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM 203
Query: 72 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
SG +++ + + G+ + L M+ EAD+ Y LI + G +
Sbjct: 204 KGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGEL 263
Query: 132 DKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVL 191
D+ + LF + +G P +T+ + I + K EIFE MI+ G P+ T L
Sbjct: 264 DRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGL 323
Query: 192 LAACSNEDQTEQVTTVIRTM 211
+ +T++ ++ M
Sbjct: 324 IDGLCGVGKTKEALQLLNLM 343
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 84/190 (44%), Gaps = 3/190 (1%)
Query: 22 RAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTF 81
+ GF A V M + G + +H +LL + K +L +M ++ L D F
Sbjct: 122 KTGF---AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVF 178
Query: 82 VLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLL 141
N+++ + + K E+ M+ C + T+ ILI+ + +AG +D+ G + +
Sbjct: 179 SYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM 238
Query: 142 HSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQT 201
GL+ D+V +TS I + R +F+E+++ G P T L+ Q
Sbjct: 239 KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQL 298
Query: 202 EQVTTVIRTM 211
++ + + M
Sbjct: 299 KEASEIFEFM 308
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 55/103 (53%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ PD S+NI++D +AG + AE++ M R G++P + ++ L++ F K G
Sbjct: 555 MQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGY 614
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVL 103
+ + ++M SG + D + +S+L G+ K+ E++
Sbjct: 615 LDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELV 657
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
+P YN L+ + + G L+ A +FE+M+R P + S +++ K G++ E
Sbjct: 526 QPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAES 585
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+L M ++GL D F + ++N + +LG + M + E D + ++
Sbjct: 586 LLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCI 645
Query: 127 QAGFIDKMEGLFQLLHSKGLKPD 149
G DK+ L + L K + D
Sbjct: 646 SQGETDKLTELVKKLVDKDIVLD 668
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 77/186 (41%), Gaps = 2/186 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVG--ITPTMKSHMVLLSAFSKT 58
M+ PD +YNIL+ G L++A + M + P + S+ L+ K
Sbjct: 378 MKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKE 437
Query: 59 GNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTY 118
+ + DI + + + D N +LN + G K E+ + + + TY
Sbjct: 438 NRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTY 497
Query: 119 NILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID 178
+I+ + + G ++ +GL + L+P V + + + K+ + +FEEM
Sbjct: 498 TAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQR 557
Query: 179 SGCYPD 184
+PD
Sbjct: 558 DNNFPD 563
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 101/199 (50%), Gaps = 3/199 (1%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 72
+N L+ +YG AG ++ +F+ MK++GI+P++ + LLS K G D+ ++M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 73 KS-GLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
++ G+ D++ N+++N + + + + ME C D+ TYN +I+ +AG +
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 132 DKMEGLFQ--LLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAK 189
+ L + + P+VV++T+ + Y K+ + +F +M+ G P+ T
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 190 VLLAACSNEDQTEQVTTVI 208
L+ S + +++ ++
Sbjct: 321 TLIKGLSEAHRYDEIKDIL 339
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 97/225 (43%), Gaps = 13/225 (5%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDM--KRVGITPTMKSHMVLLSAFSKT 58
M+ C PD +YN ++D RAG + A V M K + P + S+ L+ +
Sbjct: 235 MELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMK 294
Query: 59 GNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENG--SCEADIS 116
+ + + + M GLK + N+++ ++ +++++L + + D
Sbjct: 295 QEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDAC 354
Query: 117 TYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
T+NILI + AG +D +FQ + + L PD +++ I + + R +F E+
Sbjct: 355 TFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 414
Query: 177 IDSGCYPDGGTAKVLLAA--------CSNEDQTEQVTTVIRTMDK 213
+ K L AA C+N +T+Q V R + K
Sbjct: 415 FEKEVLLGKDECKPLAAAYNPMFEYLCAN-GKTKQAEKVFRQLMK 458
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 100/248 (40%), Gaps = 40/248 (16%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRV-GITPTMKSHMVLLSAFSKTG 59
M+ MG P ++N L+ + G A +F++M+R G+TP + L++ F K
Sbjct: 164 MKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNS 223
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEA--DIST 117
V + I M D N++++ R G+ VL+ M + + ++ +
Sbjct: 224 MVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVS 283
Query: 118 YNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLY----------- 166
Y L+ Y ID+ +F + S+GLKP+ VT+ + I S+ Y
Sbjct: 284 YTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGN 343
Query: 167 ------------------VRC--------LEIFEEMIDSGCYPDGGTAKVLLAACSNEDQ 200
C +++F+EM++ +PD + VL+ ++
Sbjct: 344 DAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNE 403
Query: 201 TEQVTTVI 208
++ T+
Sbjct: 404 FDRAETLF 411
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 1/165 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ CE D +Y +V +G AG + A VF++M R G+ P++ ++ ++ K N
Sbjct: 256 MKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDN 315
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V + +M + G + + N ++ G+F + EE++ MEN CE + TYN+
Sbjct: 316 VENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNM 375
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRI-GAYSKKK 164
+I Y + ++K GLF+ + S P++ T+ I G + +K+
Sbjct: 376 MIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKR 420
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 1/192 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC D AS+N ++D ++ + A +F ++ T+ ++ V+L+ +
Sbjct: 152 MHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTV-TYNVILNGWCLIKR 210
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
K ++L +M + G+ + N+ML + R GQ E M+ CE D+ TY
Sbjct: 211 TPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTT 270
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+++ +G AG I + +F + +G+ P V T+ + I KK + +FEEM+ G
Sbjct: 271 VVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG 330
Query: 181 CYPDGGTAKVLL 192
P+ T VL+
Sbjct: 331 YEPNVTTYNVLI 342
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 92/202 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G P+ +YN ++ + RAG + A F +MK+ + ++ ++ F G
Sbjct: 221 MVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGE 280
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + ++ ++M + G+ N+M+ + + + M E +++TYN+
Sbjct: 281 IKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNV 340
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI AG + E L Q + ++G +P+ T+ I YS+ + L +FE+M
Sbjct: 341 LIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGD 400
Query: 181 CYPDGGTAKVLLAACSNEDQTE 202
C P+ T +L++ ++E
Sbjct: 401 CLPNLDTYNILISGMFVRKRSE 422
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/203 (19%), Positives = 88/203 (43%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D +YN++++ + A V ++M GI P + ++ +L F + G + +
Sbjct: 194 DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFF 253
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
+M K ++D ++++ +G G+ + V M ++TYN +I +
Sbjct: 254 LEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKK 313
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTA 188
++ +F+ + +G +P+V T+ I + R E+ + M + GC P+ T
Sbjct: 314 DNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTY 373
Query: 189 KVLLAACSNEDQTEQVTTVIRTM 211
+++ S + E+ + M
Sbjct: 374 NMMIRYYSECSEVEKALGLFEKM 396
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 89/182 (48%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C P+ +YN L++ + +A +++ +F +M + G+ ++ L+ F + + +
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 455
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+ QM G+ + N++L+ + G+ K V ++ E I TYNI+I
Sbjct: 456 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 515
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
+AG ++ LF L KG+KPDV+ + + I + +K L +F +M + G PD
Sbjct: 516 CKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Query: 186 GT 187
GT
Sbjct: 576 GT 577
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 102/213 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M++ G P+ +Y+ L+ +DA + DM I P + + L+ AF K G
Sbjct: 286 MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK 345
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + E + ++M K + D F +S++N + + + + + +M + C ++ TYN
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN + +A ID+ LF+ + +GL + VT+T+ I + + + +F++M+ G
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
+P+ T LL + E+ V + +
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 498
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 99/214 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ E + Y+ ++D+ + +DA +F +M+ G+ P + ++ L+S
Sbjct: 251 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYER 310
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S +L+ M + + + N++++ + + G+ + E++ M S + DI TY+
Sbjct: 311 WSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 370
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN + +D+ + +F+L+ SK P+VVT+ + I + K K +E+F EM G
Sbjct: 371 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG 430
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
+ T L+ + V + M D
Sbjct: 431 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 464
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 101/211 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ +G + +YNIL++ + R ++ A A+ M ++G P++ + LL+ +
Sbjct: 111 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+S +++QM + G + DT ++++ + + ++ M C+ ++ TY +
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
++N + G ID L + + ++ +VV +++ I + K + L +F EM + G
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
P+ T L++ N ++ + ++ M
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDM 321
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/213 (17%), Positives = 94/213 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC+P+ +Y ++V+ + G ++ A + M+ I + + ++ + K +
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 275
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
++ +M G++ + +S+++ ++ +L+ M ++ T+N
Sbjct: 276 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ + + G + + E L+ + + + PD+ T++S I + +FE MI
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
C+P+ T L+ + ++ + R M +
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ 428
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/149 (20%), Positives = 67/149 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G + +Y L+ + +A ++A+ VF+ M G+ P + ++ LL K G
Sbjct: 426 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 485
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ K + + +S ++ + N M+ + G+ ++ + + D+ YN
Sbjct: 486 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNT 545
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPD 149
+I+ + + G ++ + LF+ + G PD
Sbjct: 546 MISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 69/167 (41%)
Query: 26 LNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNS 85
L+DA +F M + P++ LLSA +K + +M + G+ + + N
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
++N + R Q +L M E I T + L+N Y I L + G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLL 192
+PD +T+T+ I + + + M+ GC P+ T V++
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 105/209 (50%), Gaps = 2/209 (0%)
Query: 2 QHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGIT-PTMKSHMVLLSA-FSKTG 59
++G +P+ +NILV + + G +N A V E+MKR GI+ P ++ L+ F+ +
Sbjct: 188 HNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSR 247
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
+ E + + K G+ D N M+N + R G+ + +++L M+ C ++ Y+
Sbjct: 248 SKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYS 307
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
L+N + + G I + + F + GLK D V +T+ + + + +++ EM S
Sbjct: 308 ALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKAS 367
Query: 180 GCYPDGGTAKVLLAACSNEDQTEQVTTVI 208
C D T V+L S+E ++E+ ++
Sbjct: 368 RCRADTLTYNVILRGLSSEGRSEEALQML 396
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 96/198 (48%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G PD ++N++++ + RAG + A+ + + MK+ G P + ++ L++ F K G + +
Sbjct: 263 GISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEA 322
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ +++ K+GLKLDT +++N + R G+ + ++L M+ C AD TYN+++
Sbjct: 323 KQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRG 382
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
G ++ + S+G+ + ++ + A + ++ M + G +P
Sbjct: 383 LSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPH 442
Query: 185 GGTAKVLLAACSNEDQTE 202
T L+ TE
Sbjct: 443 HATWNELVVRLCESGYTE 460
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 76/160 (47%), Gaps = 6/160 (3%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ GC P+ +Y+ L++ + + G + +A+ F+++K+ G+ + L++ F + G
Sbjct: 294 MKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGE 353
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEA---DIST 117
+ +L +M S + DT N +L L G+ EE L +++ E + +
Sbjct: 354 TDEAMKLLGEMKASRCRADTLTYNVILR---GLSSEGRSEEALQMLDQWGSEGVHLNKGS 410
Query: 118 YNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRI 157
Y I++N G ++K ++ +G+ P TW +
Sbjct: 411 YRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELV 450
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 98/207 (47%), Gaps = 1/207 (0%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDM-KRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
P+ +Y+ L+D +A +FEDM + GI+P + V+++ F + G V + +
Sbjct: 230 PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKK 289
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
IL+ M K+G + + ++++N + ++G+ + ++ ++ + D Y L+N +
Sbjct: 290 ILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFC 349
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGG 186
+ G D+ L + + + D +T+ + S + L++ ++ G + + G
Sbjct: 350 RNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKG 409
Query: 187 TAKVLLAACSNEDQTEQVTTVIRTMDK 213
+ +++L A + E+ + M +
Sbjct: 410 SYRIILNALCCNGELEKAVKFLSVMSE 436
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G PD +YN L+ Y + G + A V DM+ G P + S+ +L+ F K G + +
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
++LN+M GLK +T N +++ + + + + E+ M C+ D+ T+N LI+
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ I L + + S+G+ + VT+ + I A+ ++ ++ EM+ G D
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
T L+ + ++ ++ M +D
Sbjct: 564 EITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 5/222 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M++ GC+P+ SY ILVD + + G +++A V +M G+ P L+SAF K
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + +I +M + G K D + NS+++ + + +L M + A+ TYN
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN + + G I + L + +G D +T+ S I + + +FE+M+ G
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 181 CYPDGGTAKVLLAACSNEDQTE-----QVTTVIRTMDKDIKT 217
P + +L+ E Q V+R DI T
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVT 636
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 37/230 (16%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC+PD ++N L+ + A + DM G+ ++ L++AF + G
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 544
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVL---------------TV 105
+ + ++N+M G LD NS++ R G+ K + +
Sbjct: 545 IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNI 604
Query: 106 MENGSCEA--------------------DISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
+ NG C + DI T+N LIN +AG I+ +F+ L ++G
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664
Query: 146 LKPDVVTWTSRIGAYSKKK-LYVRCLEIFEEMIDSGCYPDGGTAKVLLAA 194
+ PD VT+ + + K +Y CL + +E I+ G P+ T +LL +
Sbjct: 665 IPPDTVTFNTLMSWLCKGGFVYDACL-LLDEGIEDGFVPNHRTWSILLQS 713
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 98/215 (45%), Gaps = 5/215 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC P+ Y L+ + + +N+A + E+M +G P ++ ++ K
Sbjct: 243 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 302
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+++ ++N+M G D ++N ++G+ +++ + + +I +N
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNT 358
Query: 121 LINRYGQAGFIDKMEGLFQ-LLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
LI+ + G +D + + ++ S G+ PDV T+ S I Y K+ L LE+ +M +
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 180 GCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
GC P+ + +L+ + ++ V+ M D
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD 453
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 84/163 (51%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M +P+ YN L+ AY R+G L+ A + EDMK GI+P ++ L+ S
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V + + + +M GL+ + F ++++ YG+LGQ K+E +L M + + + TY +
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKK 163
+I Y + G + + L + KG+ PD +T+ I Y K+
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQ 798
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 88/185 (47%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G PD +Y++++D +A + + F++M + P + L+ A+ ++G +S
Sbjct: 605 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA 664
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
++ M G+ ++ S++ + + + + + M E ++ Y LI+
Sbjct: 665 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 724
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
YG+ G + K+E L + +HSK + P+ +T+T IG Y++ + EM + G PD
Sbjct: 725 YGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 784
Query: 185 GGTAK 189
T K
Sbjct: 785 SITYK 789
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 95/214 (44%), Gaps = 1/214 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G P+ ++N ++D G G ++A E M G+ PT+ ++ +L+ ++
Sbjct: 286 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 345
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ +L +M K G + V N++++ + G K E+ +M + STYN
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI Y + G D E L + + S G + ++TS I ++ L EM+
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 181 CYPDGGTAKVLLAA-CSNEDQTEQVTTVIRTMDK 213
P GG L++ C + ++ + + ++K
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK 499
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 98/211 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G +PD +Y+IL+ + +A ++D KR G+ P + ++ V++ K
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ ++ ++M ++ +T V N ++ Y R G+ E+ M++ + +TY
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI +++ + LF+ + +GL+P+V +T+ I Y K V+ + EM
Sbjct: 686 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 745
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+P+ T V++ + + + + ++ M
Sbjct: 746 VHPNKITYTVMIGGYARDGNVTEASRLLNEM 776
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 1/137 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+H G P+ A+Y L+ + +A+ +FE+M+ G+ P + + L+ + K G
Sbjct: 671 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 730
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ K E +L +M + + M+ Y R G + +L M D TY
Sbjct: 731 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 790
Query: 121 LINRY-GQAGFIDKMEG 136
I Y Q G ++ +G
Sbjct: 791 FIYGYLKQGGVLEAFKG 807
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 92/211 (43%), Gaps = 1/211 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
+ + G P + + NIL+ + RA F D+ G++P + ++AF K G
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGK 275
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V + + ++M ++G+ + N++++ G G++ + M E + TY+I
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L+ +A I + + + KG P+V+ + + I ++ + + +EI + M+ G
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
T L+ Q + +++ M
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEM 426
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/153 (19%), Positives = 74/153 (48%), Gaps = 1/153 (0%)
Query: 32 VFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYG 91
VF + G+ P+ + +LL++ + KC + + +CK G+ D ++ + +N +
Sbjct: 213 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFC 271
Query: 92 RLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVV 151
+ G+ + ++ + ME ++ T+N +I+ G G D+ + + +G++P ++
Sbjct: 272 KGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLI 331
Query: 152 TWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
T++ + ++ K + +EM G P+
Sbjct: 332 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPN 364
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 91/238 (38%), Gaps = 35/238 (14%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G P+ YN L+D++ AG LN A + + M G++ T ++ L+ + K G
Sbjct: 356 MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 415
Query: 61 VSKCEDILNQMCKSGLKLDT-------------FVLNSMLNLYGRL-------------- 93
E +L +M G ++ + +S L G +
Sbjct: 416 ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT 475
Query: 94 --------GQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
G+ K E+ N D T N L++ +AG +D+ + + + +G
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQ 203
D V++ + I KK +EM+ G PD T +L+ N ++ E+
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 96/249 (38%), Gaps = 37/249 (14%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G EP +Y+ILV RA + DA V ++M + G P + + L+ +F + G+
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN- 119
++K +I + M GL L + N+++ Y + GQ E +L M + + ++
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 120 ---------------------ILINRYGQAGFI--------------DKMEGLFQLLHSK 144
+L N G + +E FQ L+ K
Sbjct: 441 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN-K 499
Query: 145 GLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQV 204
G D T + + + I +E++ GC D + L++ C + + ++
Sbjct: 500 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559
Query: 205 TTVIRTMDK 213
+ M K
Sbjct: 560 FMFLDEMVK 568
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 84/163 (51%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M +P+ YN L+ AY R+G L+ A + EDMK GI+P ++ L+ S
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V + + + +M GL+ + F ++++ YG+LGQ K+E +L M + + + TY +
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKK 163
+I Y + G + + L + KG+ PD +T+ I Y K+
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQ 798
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 88/185 (47%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G PD +Y++++D +A + + F++M + P + L+ A+ ++G +S
Sbjct: 605 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA 664
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
++ M G+ ++ S++ + + + + + M E ++ Y LI+
Sbjct: 665 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 724
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
YG+ G + K+E L + +HSK + P+ +T+T IG Y++ + EM + G PD
Sbjct: 725 YGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 784
Query: 185 GGTAK 189
T K
Sbjct: 785 SITYK 789
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 95/214 (44%), Gaps = 1/214 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G P+ ++N ++D G G ++A E M G+ PT+ ++ +L+ ++
Sbjct: 286 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 345
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ +L +M K G + V N++++ + G K E+ +M + STYN
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI Y + G D E L + + S G + ++TS I ++ L EM+
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 181 CYPDGGTAKVLLAA-CSNEDQTEQVTTVIRTMDK 213
P GG L++ C + ++ + + ++K
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK 499
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 98/211 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G +PD +Y+IL+ + +A ++D KR G+ P + ++ V++ K
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ ++ ++M ++ +T V N ++ Y R G+ E+ M++ + +TY
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI +++ + LF+ + +GL+P+V +T+ I Y K V+ + EM
Sbjct: 686 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 745
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+P+ T V++ + + + + ++ M
Sbjct: 746 VHPNKITYTVMIGGYARDGNVTEASRLLNEM 776
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 1/137 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+H G P+ A+Y L+ + +A+ +FE+M+ G+ P + + L+ + K G
Sbjct: 671 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 730
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ K E +L +M + + M+ Y R G + +L M D TY
Sbjct: 731 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKE 790
Query: 121 LINRY-GQAGFIDKMEG 136
I Y Q G ++ +G
Sbjct: 791 FIYGYLKQGGVLEAFKG 807
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 92/211 (43%), Gaps = 1/211 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
+ + G P + + NIL+ + RA F D+ G++P + ++AF K G
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGK 275
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V + + ++M ++G+ + N++++ G G++ + M E + TY+I
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L+ +A I + + + KG P+V+ + + I ++ + + +EI + M+ G
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
T L+ Q + +++ M
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEM 426
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/153 (19%), Positives = 74/153 (48%), Gaps = 1/153 (0%)
Query: 32 VFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYG 91
VF + G+ P+ + +LL++ + KC + + +CK G+ D ++ + +N +
Sbjct: 213 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFC 271
Query: 92 RLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVV 151
+ G+ + ++ + ME ++ T+N +I+ G G D+ + + +G++P ++
Sbjct: 272 KGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLI 331
Query: 152 TWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
T++ + ++ K + +EM G P+
Sbjct: 332 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPN 364
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 91/238 (38%), Gaps = 35/238 (14%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G P+ YN L+D++ AG LN A + + M G++ T ++ L+ + K G
Sbjct: 356 MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 415
Query: 61 VSKCEDILNQMCKSGLKLDT-------------FVLNSMLNLYGRL-------------- 93
E +L +M G ++ + +S L G +
Sbjct: 416 ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT 475
Query: 94 --------GQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
G+ K E+ N D T N L++ +AG +D+ + + + +G
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQ 203
D V++ + I KK +EM+ G PD T +L+ N ++ E+
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 96/249 (38%), Gaps = 37/249 (14%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G EP +Y+ILV RA + DA V ++M + G P + + L+ +F + G+
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN- 119
++K +I + M GL L + N+++ Y + GQ E +L M + + ++
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 120 ---------------------ILINRYGQAGFI--------------DKMEGLFQLLHSK 144
+L N G + +E FQ L+ K
Sbjct: 441 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN-K 499
Query: 145 GLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQV 204
G D T + + + I +E++ GC D + L++ C + + ++
Sbjct: 500 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559
Query: 205 TTVIRTMDK 213
+ M K
Sbjct: 560 FMFLDEMVK 568
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 102/213 (47%), Gaps = 1/213 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G P+ +YN L++ Y + G + DA V E M+ ++P +++ L+ + K+ N
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-N 442
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V K +LN+M + + D NS+++ R G F +L++M + D TY
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I+ ++ +++ LF L KG+ P+VV +T+ I Y K + E+M+
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
C P+ T L+ + + ++ T + M K
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVK 595
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 102/214 (47%), Gaps = 6/214 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G PD+ +Y ++D+ ++ + +A +F+ +++ G+ P + + L+ + K G
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLN---LYGRLGQFGKMEEVLTVMENGSCEADIST 117
V + +L +M ++ N++++ G+L + +EE + + + +ST
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI---GLQPTVST 604
Query: 118 YNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
ILI+R + G D FQ + S G KPD T+T+ I Y ++ + ++ +M
Sbjct: 605 DTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMR 664
Query: 178 DSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
++G PD T L+ + QT V++ M
Sbjct: 665 ENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 92/192 (47%), Gaps = 1/192 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC + +Y L+ A +++A +F MK PT++++ VL+ + +
Sbjct: 279 MPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSER 338
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S+ +++ +M ++G+K + +++ +F K E+L M ++ TYN
Sbjct: 339 KSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNA 398
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN Y + G I+ + +L+ S+ L P+ T+ I Y K ++ + + + +M++
Sbjct: 399 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVH-KAMGVLNKMLERK 457
Query: 181 CYPDGGTAKVLL 192
PD T L+
Sbjct: 458 VLPDVVTYNSLI 469
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 19/214 (8%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M C P+ ++N L+ G L +A + E M ++G+ PT+ + +L+ K G+
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGD 617
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
QM SG K D + + Y R G+ E+++ M D+ TY+
Sbjct: 618 FDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSS 677
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIG-----AYSKKK----------- 164
LI YG G + + + + G +P T+ S I Y K+K
Sbjct: 678 LIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSN 737
Query: 165 --LYVRCLEIFEEMIDSGCYPDGGT-AKVLLAAC 195
+ +E+ E+M++ P+ + K++L C
Sbjct: 738 MMEFDTVVELLEKMVEHSVTPNAKSYEKLILGIC 771
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 92/199 (46%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 72
YN L+++ R G +++ + V+ +M + P + ++ +++ + K GNV + ++++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 73 KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFID 132
++GL D F S++ Y + +V M C + Y LI+ A ID
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 133 KMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLL 192
+ LF + P V T+T I + + L + +EM ++G P+ T VL+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 193 AACSNEDQTEQVTTVIRTM 211
+ ++ + E+ ++ M
Sbjct: 366 DSLCSQCKFEKARELLGQM 384
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 99/230 (43%), Gaps = 19/230 (8%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G +PD +Y + Y R G L DAE + M+ G++P + ++ L+ + G
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQ 687
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNL-----YGR-------------LGQFGKMEEV 102
+ D+L +M +G + S++ YG+ + +F + E+
Sbjct: 688 TNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVEL 747
Query: 103 LTVMENGSCEADISTYNILINRYGQAGFIDKMEGLF-QLLHSKGLKPDVVTWTSRIGAYS 161
L M S + +Y LI + G + E +F + ++G+ P + + + +
Sbjct: 748 LEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCC 807
Query: 162 KKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
K K + ++ ++MI G P + KVL+ + + E+ T+V + +
Sbjct: 808 KLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNL 857
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 78/167 (46%), Gaps = 1/167 (0%)
Query: 51 LLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGS 110
LL++ ++ G V + + + +M + + + + N M+N Y +LG + + ++ +
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAG 248
Query: 111 CEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCL 170
+ D TY LI Y Q +D +F + KG + + V +T I + +
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAM 308
Query: 171 EIFEEMIDSGCYPDGGTAKVLLAA-CSNEDQTEQVTTVIRTMDKDIK 216
++F +M D C+P T VL+ + C +E ++E + V + IK
Sbjct: 309 DLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIK 355
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 50/118 (42%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G P +N L+ + N+A V +DM VG P ++S VL+ K G +
Sbjct: 791 GISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERG 850
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILI 122
+ + + G D +++ G+ G E+ VME C+ TY++LI
Sbjct: 851 TSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 37/241 (15%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
GC P +Y +LV+ R A V EDM G P + ++ L++ + GN+ +
Sbjct: 239 GCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEV 298
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
++ + GL+L+T N++L+ + ++EE+L +M S + TYNILIN
Sbjct: 299 ASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILING 358
Query: 125 YGQAGFIDK-MEGLFQLLHSKGLKPDVVTWTSRIGAYS---------------------- 161
+A + + ++ +Q+L K L PD+VT+ + +GA S
Sbjct: 359 LCKARLLSRAIDFFYQMLEQKCL-PDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPP 417
Query: 162 -------------KKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVI 208
KK L + LE++ +M+D+G +PD T + L+ + E+ V+
Sbjct: 418 GLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVL 477
Query: 209 R 209
+
Sbjct: 478 K 478
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 88/198 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G PD +YN ++ G A ++D + G P M ++ VL+ +
Sbjct: 200 MSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCG 259
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
++ ++L M G D NS++N R G ++ V+ + + E + TYN
Sbjct: 260 SARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNT 319
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L++ + D++E + +++ P V+T+ I K +L R ++ F +M++
Sbjct: 320 LLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQK 379
Query: 181 CYPDGGTAKVLLAACSNE 198
C PD T +L A S E
Sbjct: 380 CLPDIVTYNTVLGAMSKE 397
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 95/214 (44%), Gaps = 3/214 (1%)
Query: 1 MQHM---GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSK 57
+QH+ G E + +YN L+ + + ++ E + M + PT+ ++ +L++ K
Sbjct: 302 IQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCK 361
Query: 58 TGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADIST 117
+S+ D QM + D N++L + G E+L +++N C + T
Sbjct: 362 ARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLIT 421
Query: 118 YNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
YN +I+ + G + K L+ + G+ PD +T S I + + L ++ +E
Sbjct: 422 YNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETS 481
Query: 178 DSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+ G G T ++++ + + E V+ M
Sbjct: 482 NRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIM 515
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 6/206 (2%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
E D + N ++ G L DA + E M R P S L+ ++ + K
Sbjct: 101 ENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMC 160
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGS---CEADISTYNILIN 123
IL M SG DT N ++ G L + G + L ++E+ S D+ TYN +I
Sbjct: 161 ILRVMVMSGGVPDTITYNMII---GNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIR 217
Query: 124 RYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYP 183
G ++ ++ G P ++T+T + + R +E+ E+M GCYP
Sbjct: 218 CMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYP 277
Query: 184 DGGTAKVLLAACSNEDQTEQVTTVIR 209
D T L+ E+V +VI+
Sbjct: 278 DIVTYNSLVNYNCRRGNLEEVASVIQ 303
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 70/155 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M C PD +YN ++ A + G ++DA + +K P + ++ ++ +K G
Sbjct: 375 MLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGL 434
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ K ++ +QM +G+ D S++ + R + +VL N STY +
Sbjct: 435 MKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRL 494
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTS 155
+I + I+ + +++ + G KPD +T+
Sbjct: 495 VIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTA 529
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 106/211 (50%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G P+ +YN L+D + G L A ++ D+K G++P++ ++ +L+S F + G+
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGD 388
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S ++ +M + G+K +++ + R K ++ ME D+ TY++
Sbjct: 389 TSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSV 448
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ + G +++ LF+ + K +P+ V + + I Y K+ R L++ +EM +
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE 508
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
P+ + + ++ E ++++ ++ M
Sbjct: 509 LAPNVASYRYMIEVLCKERKSKEAERLVEKM 539
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 104/211 (49%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ G P+ +YN +++ + G DA VF++M+ G++ + ++ L+ +
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+++ +++QM G+ + N++++ + +G+ GK + +++ + TYNI
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L++ + + G + + + +G+KP VT+T I +++ + +++ M + G
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
PD T VL+ + Q + + + ++M
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSM 469
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 87/183 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
++ G P +YNILV + R G + A + ++M+ GI P+ ++ +L+ F+++ N
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDN 423
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ K + M + GL D + +++ + GQ + + M +CE + YN
Sbjct: 424 MEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT 483
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I Y + G + L + + K L P+V ++ I K++ + E+MIDSG
Sbjct: 484 MILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSG 543
Query: 181 CYP 183
P
Sbjct: 544 IDP 546
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 93/216 (43%), Gaps = 6/216 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G + +YN L+ R LN+A V + MK GI P + ++ L+ F G
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ K + + GL N +++ + R G +++ ME + TY I
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413
Query: 121 LINRYGQAGFIDKMEGLFQL---LHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
LI+ + ++ D ME QL + GL PDV T++ I + K +F+ M+
Sbjct: 414 LIDTFARS---DNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMV 470
Query: 178 DSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
+ C P+ ++ E + + +++ M++
Sbjct: 471 EKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEE 506
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 98/213 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M +G + +Y +L++ + G ++E M+ G+ P + ++ +++ K G
Sbjct: 224 MGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGR 283
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ ++M + G+ + N+++ R + + +V+ M++ ++ TYN
Sbjct: 284 TKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNT 343
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ + G + K L + L S+GL P +VT+ + + +K ++ +EM + G
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
P T +L+ + D E+ + +M++
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 81/184 (44%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D S+ IL+ AG + + + ++ G +P + + L+ K G + K +D+
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
+M K GL + ++N + G + E+ M+ ++ TYN ++N+ +
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTA 188
G +F + +G+ ++VT+ + IG ++ ++ ++M G P+ T
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 189 KVLL 192
L+
Sbjct: 342 NTLI 345
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 110/249 (44%), Gaps = 36/249 (14%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G EPD + L+DA + G + DA +FEDM R+ ++ LL + + G
Sbjct: 209 MPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWCRVGK 267
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFG----------------------- 97
+ + + +L QM ++G + D ++L+ Y G+
Sbjct: 268 MMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTV 327
Query: 98 ---------KMEEVLTV---MENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
+MEE + V ME CEAD+ TY L++ + + G IDK + + KG
Sbjct: 328 LIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKG 387
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVT 205
L P +T+ + A+ KK+ + CLE+ E+M +PD G V++ + ++
Sbjct: 388 LMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAV 447
Query: 206 TVIRTMDKD 214
+ M+++
Sbjct: 448 RLWNEMEEN 456
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 2/209 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G EP+ Y +L+ A + + +A VF +M+R + ++ L+S F K G
Sbjct: 313 MRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGK 372
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ KC +L+ M K GL ++ + + F + E++ M DI YN+
Sbjct: 373 IDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNV 432
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I + G + + L+ + GL P V T+ I + + + + F+EM+ G
Sbjct: 433 VIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRG 492
Query: 181 CY--PDGGTAKVLLAACSNEDQTEQVTTV 207
+ GT K+LL + + E V
Sbjct: 493 LFSVSQYGTLKLLLNTVLKDKKLEMAKDV 521
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 94/204 (46%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
PD ++N ++D Y RA +++ + ++ R G+ ++ L+ F + N++ +D+
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
+M G+ DT N +L + + + E+ V++ + D YNI+I+ +
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 549
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
+D+ LF L G++PDV T+ I + K +F +M D+G PD T
Sbjct: 550 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNST 609
Query: 188 AKVLLAACSNEDQTEQVTTVIRTM 211
L+ C + ++ +I M
Sbjct: 610 YNTLIRGCLKAGEIDKSIELISEM 633
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 2/197 (1%)
Query: 3 HMGCEPDRASYNILVDAYG-RAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNV 61
H C DR S + + Y GFL +A A+F+ M +G+TP + + L++ G V
Sbjct: 184 HGLCLEDRISEALALFGYMVETGFL-EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242
Query: 62 SKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNIL 121
+ ++N+M GL +D +++N ++G +L+ ME + D+ Y+ +
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAI 302
Query: 122 INRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGC 181
I+R + G + LF + KG+ P+V T+ I + + + +MI+
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362
Query: 182 YPDGGTAKVLLAACSNE 198
PD T L++A E
Sbjct: 363 NPDVLTFNALISASVKE 379
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 107/255 (41%), Gaps = 42/255 (16%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ +PD Y+ ++D + G +DA+ +F +M GI P + ++ ++ F G
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR 346
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S + +L M + + D N++++ + G+ + E++ M + D TYN
Sbjct: 347 WSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNS 406
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKK---------------- 164
+I + + D + +F L+ S PDVVT+ + I Y + K
Sbjct: 407 MIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Query: 165 -----------LYVRC--------LEIFEEMIDSGCYPDGGTAKVLLAA-CSNEDQTE-- 202
++ C ++F+EMI G PD T +LL C NE E
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522
Query: 203 QVTTVIRTMDKDIKT 217
++ VI+ D+ T
Sbjct: 523 ELFEVIQMSKIDLDT 537
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 76/172 (44%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G D +Y +V+ + G A + M+ I P + + ++ K G+ S
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ + ++M + G+ + F N M++ + G++ + +L M D+ T+N LI+
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
+ G + + E L + + + PD VT+ S I + K + +F+ M
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 99/213 (46%), Gaps = 1/213 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ P+ ++N L+ A ++ + A+ VFE+M R TP K++ +LL + K N
Sbjct: 194 MEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGKEPN 252
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ K ++ +M +G D + M+++ + G+ + ++ M+ C+ Y++
Sbjct: 253 LPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSV 312
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L++ YG +++ F + G+K DV + S IGA+ K + +EM G
Sbjct: 313 LVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKG 372
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
P+ + ++L + ++ V R M K
Sbjct: 373 VTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK 405
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 97/207 (46%), Gaps = 1/207 (0%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
GC PD +Y+I+VD +AG +++A + M PT + VL+ + + +
Sbjct: 267 GCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEA 326
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
D +M +SG+K D V NS++ + + + + VL M++ + + NI++
Sbjct: 327 VDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRH 386
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ G D+ +F+ + K +PD T+T I + +KK ++++ M G +P
Sbjct: 387 LIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPS 445
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTM 211
T VL+ E T++ ++ M
Sbjct: 446 MHTFSVLINGLCEERTTQKACVLLEEM 472
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 93/200 (46%), Gaps = 1/200 (0%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM 71
++ I++ Y RA +++A F M++ + P + + LLSA K+ NV K +++ M
Sbjct: 170 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM 229
Query: 72 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
+ D+ + +L +G+ K EV M + C DI TY+I+++ +AG +
Sbjct: 230 -RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRV 288
Query: 132 DKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVL 191
D+ G+ + + KP ++ + Y + ++ F EM SG D L
Sbjct: 289 DEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSL 348
Query: 192 LAACSNEDQTEQVTTVIRTM 211
+ A ++ + V V++ M
Sbjct: 349 IGAFCKANRMKNVYRVLKEM 368
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 86/173 (49%), Gaps = 4/173 (2%)
Query: 44 TMKSHMVLLSAFSKTGNVSKCEDILNQMCKSG-LKLDTFVLNSMLNLYGRLGQFGKMEEV 102
+++++ +++ + +K D++N M K L ++TF + ++ Y R + +
Sbjct: 133 SVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCI--VMRKYARAQKVDEAIYA 190
Query: 103 LTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSK 162
VME ++ +N L++ ++ + K + +F+ + + PD T++ + + K
Sbjct: 191 FNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGK 249
Query: 163 KKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKDI 215
+ + E+F EMID+GC+PD T +++ + ++ ++R+MD I
Sbjct: 250 EPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSI 302
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 103/214 (48%), Gaps = 1/214 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGI-TPTMKSHMVLLSAFSKTG 59
M GCEPD +YN L+ + ++ LN A +F+D+K + +P + ++ ++S + K G
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
+ + +L+ M + G+ N +++ Y + G+ EE+ M + C D+ T+
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
LI+ Y + G + + L++ ++++G+ P+ T++ I A + ++ E+ ++
Sbjct: 352 SLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
Query: 180 GCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
P ++ + + ++ M+K
Sbjct: 412 DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEK 445
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 35/223 (15%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C PD +Y ++ Y +AG + +A ++ +DM R+GI PT + VL+ ++K G + E
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQ----FGKMEEV-----------LTVMENGS 110
+I +M G D S+++ Y R+GQ F EE+ +++ N
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 111 C----------------EADIST----YNILINRYGQAGFIDKMEGLFQLLHSKGLKPDV 150
C DI YN +I+ + +AG +++ + + + K KPD
Sbjct: 393 CNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDK 452
Query: 151 VTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLA 193
+T+T I + K + IF +M+ GC PD T LL+
Sbjct: 453 ITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 34/215 (15%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN----------- 60
+YN+L + +AG + A +FE MK G++P + L+S+F++ G
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 61 --VSKCEDILNQMCKSGLKL--------------------DTFVLNSMLNLYGRLGQFGK 98
V C ++N + + +KL DT N ++ +G+ K
Sbjct: 165 FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEK 224
Query: 99 MEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGL-KPDVVTWTSRI 157
E+L VM CE DI TYN LI + ++ ++K +F+ + S + PDVVT+TS I
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMI 284
Query: 158 GAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLL 192
Y K + ++M+ G YP T VL+
Sbjct: 285 SGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLV 319
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 78/162 (48%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC PD ++ L+D Y R G ++ ++E+M G+ P ++ +L++A
Sbjct: 338 MISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENR 397
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ K ++L Q+ + F+ N +++ + + G+ + ++ ME C+ D T+ I
Sbjct: 398 LLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTI 457
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSK 162
LI + G + + +F + + G PD +T +S + K
Sbjct: 458 LIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 1/191 (0%)
Query: 14 NILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCK 73
N L++ + + DA +F++ R K+ +L+ G K ++L M
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 74 SGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGS-CEADISTYNILINRYGQAGFID 132
G + D N+++ + + + K E+ +++GS C D+ TY +I+ Y +AG +
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 133 KMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLL 192
+ L + G+ P VT+ + Y+K + EI +MI GC+PD T L+
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 193 AACSNEDQTEQ 203
Q Q
Sbjct: 355 DGYCRVGQVSQ 365
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 103/214 (48%), Gaps = 1/214 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGI-TPTMKSHMVLLSAFSKTG 59
M GCEPD +YN L+ + ++ LN A +F+D+K + +P + ++ ++S + K G
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
+ + +L+ M + G+ N +++ Y + G+ EE+ M + C D+ T+
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
LI+ Y + G + + L++ ++++G+ P+ T++ I A + ++ E+ ++
Sbjct: 352 SLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
Query: 180 GCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
P ++ + + ++ M+K
Sbjct: 412 DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEK 445
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 35/223 (15%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C PD +Y ++ Y +AG + +A ++ +DM R+GI PT + VL+ ++K G + E
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQ----FGKMEEV-----------LTVMENGS 110
+I +M G D S+++ Y R+GQ F EE+ +++ N
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 111 C----------------EADIST----YNILINRYGQAGFIDKMEGLFQLLHSKGLKPDV 150
C DI YN +I+ + +AG +++ + + + K KPD
Sbjct: 393 CNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDK 452
Query: 151 VTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLA 193
+T+T I + K + IF +M+ GC PD T LL+
Sbjct: 453 ITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 34/215 (15%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN----------- 60
+YN+L + +AG + A +FE MK G++P + L+S+F++ G
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 61 --VSKCEDILNQMCKSGLKL--------------------DTFVLNSMLNLYGRLGQFGK 98
V C ++N + + +KL DT N ++ +G+ K
Sbjct: 165 FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEK 224
Query: 99 MEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGL-KPDVVTWTSRI 157
E+L VM CE DI TYN LI + ++ ++K +F+ + S + PDVVT+TS I
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMI 284
Query: 158 GAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLL 192
Y K + ++M+ G YP T VL+
Sbjct: 285 SGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLV 319
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 78/162 (48%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC PD ++ L+D Y R G ++ ++E+M G+ P ++ +L++A
Sbjct: 338 MISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENR 397
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ K ++L Q+ + F+ N +++ + + G+ + ++ ME C+ D T+ I
Sbjct: 398 LLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTI 457
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSK 162
LI + G + + +F + + G PD +T +S + K
Sbjct: 458 LIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 1/191 (0%)
Query: 14 NILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCK 73
N L++ + + DA +F++ R K+ +L+ G K ++L M
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 74 SGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGS-CEADISTYNILINRYGQAGFID 132
G + D N+++ + + + K E+ +++GS C D+ TY +I+ Y +AG +
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 133 KMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLL 192
+ L + G+ P VT+ + Y+K + EI +MI GC+PD T L+
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 193 AACSNEDQTEQ 203
Q Q
Sbjct: 355 DGYCRVGQVSQ 365
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 94/204 (46%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
PD ++N ++D Y RA +++ + ++ R G+ ++ L+ F + N++ +D+
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
+M G+ DT N +L + + + E+ V++ + D YNI+I+ +
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 549
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
+D+ LF L G++PDV T+ I + K +F +M D+G PD T
Sbjct: 550 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNST 609
Query: 188 AKVLLAACSNEDQTEQVTTVIRTM 211
L+ C + ++ +I M
Sbjct: 610 YNTLIRGCLKAGEIDKSIELISEM 633
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 2/197 (1%)
Query: 3 HMGCEPDRASYNILVDAYG-RAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNV 61
H C DR S + + Y GFL +A A+F+ M +G+TP + + L++ G V
Sbjct: 184 HGLCLEDRISEALALFGYMVETGFL-EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242
Query: 62 SKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNIL 121
+ ++N+M GL +D +++N ++G +L+ ME + D+ Y+ +
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAI 302
Query: 122 INRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGC 181
I+R + G + LF + KG+ P+V T+ I + + + +MI+
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362
Query: 182 YPDGGTAKVLLAACSNE 198
PD T L++A E
Sbjct: 363 NPDVLTFNALISASVKE 379
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 107/255 (41%), Gaps = 42/255 (16%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ +PD Y+ ++D + G +DA+ +F +M GI P + ++ ++ F G
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR 346
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S + +L M + + D N++++ + G+ + E++ M + D TYN
Sbjct: 347 WSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNS 406
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKK-----------LYVRC 169
+I + + D + +F L+ S PDVVT+ + I Y + K + R
Sbjct: 407 MIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Query: 170 L------------------------EIFEEMIDSGCYPDGGTAKVLLAA-CSNEDQTE-- 202
L ++F+EMI G PD T +LL C NE E
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522
Query: 203 QVTTVIRTMDKDIKT 217
++ VI+ D+ T
Sbjct: 523 ELFEVIQMSKIDLDT 537
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 89/209 (42%), Gaps = 4/209 (1%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G D +Y +V+ + G A + M+ I P + + ++ K G+ S
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ + ++M + G+ + F N M++ + G++ + +L M D+ T+N LI+
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ G + + E L + + + PD VT+ S I + K + +F+ M PD
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PD 431
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
T ++ + ++ ++R + +
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREISR 460
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 106/212 (50%), Gaps = 1/212 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDM-KRVGITPTMKSHMVLLSAFSKTG 59
M +G + ++N+LV+ Y G L DA + E M + P ++ +L A SK G
Sbjct: 195 MVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKG 254
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
+S +++L M K+GL + N+++ Y +LG + +++ +M+ + D+ TYN
Sbjct: 255 RLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYN 314
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
ILIN AG + + L + S L+PDVVT+ + I + L + ++ E+M +
Sbjct: 315 ILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEND 374
Query: 180 GCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
G + T + L E++ E VT ++ +
Sbjct: 375 GVKANQVTHNISLKWLCKEEKREAVTRKVKEL 406
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 86/207 (41%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G PD +Y+ L+ AY + G L+ A + +M + GI + +L A K + +
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEA 470
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
++LN K G +D +++ + R + K E+ M+ +ST+N LI
Sbjct: 471 HNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGG 530
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
G + F L GL PD T+ S I Y K+ + E + E I PD
Sbjct: 531 LCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPD 590
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTM 211
T +LL E TE+ T+
Sbjct: 591 NYTCNILLNGLCKEGMTEKALNFFNTL 617
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 103/217 (47%), Gaps = 7/217 (3%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G P+R +YN LV Y + G L +A + E MK+ + P + ++ +L++ G+
Sbjct: 266 MKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGS 325
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + ++++ M L+ D N++++ LG + +++ MEN +A+ T+NI
Sbjct: 326 MREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNI 385
Query: 121 ----LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
L + K++ +L+ G PD+VT+ + I AY K LE+ EM
Sbjct: 386 SLKWLCKEEKREAVTRKVK---ELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREM 442
Query: 177 IDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
G + T +L A E + ++ ++ + K
Sbjct: 443 GQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHK 479
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 10/202 (4%)
Query: 3 HMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITP---TMKSHMVLLSAFSKTG 59
H+ P +A ++I + AY G + A +F+ M R+ + P T + ++ L + +
Sbjct: 124 HLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSF 183
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCE----ADI 115
++S ++ + M K G+ L+ N ++N Y GK+E+ L ++E E D
Sbjct: 184 SISSAREVFDDMVKIGVSLNVQTFNVLVNGYCL---EGKLEDALGMLERMVSEFKVNPDN 240
Query: 116 STYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEE 175
TYN ++ + G + ++ L + GL P+ VT+ + + Y K +I E
Sbjct: 241 VTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVEL 300
Query: 176 MIDSGCYPDGGTAKVLLAACSN 197
M + PD T +L+ N
Sbjct: 301 MKQTNVLPDLCTYNILINGLCN 322
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 1/179 (0%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D +Y L+ + R + A ++++MK+V ITPT+ + L+ G +
Sbjct: 485 DEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKF 544
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
+++ +SGL D NS++ Y + G+ K E S + D T NIL+N +
Sbjct: 545 DELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKE 604
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
G +K F L + + D VT+ + I A+ K K ++ EM + G PD T
Sbjct: 605 GMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFT 662
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 94/218 (43%), Gaps = 4/218 (1%)
Query: 1 MQHMGCEPDRASYNILVDA---YGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSK 57
M + +P+ + N L+ Y + ++ A VF+DM ++G++ +++ VL++ +
Sbjct: 157 MIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCL 216
Query: 58 TGNVSKCEDILNQMCKS-GLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADIS 116
G + +L +M + D N++L + G+ ++E+L M+ +
Sbjct: 217 EGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRV 276
Query: 117 TYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
TYN L+ Y + G + + + +L+ + PD+ T+ I LE+ + M
Sbjct: 277 TYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAM 336
Query: 177 IDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
PD T L+ C + + ++ M+ D
Sbjct: 337 KSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEND 374
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 91/185 (49%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
PD SY+IL+ +AGF N+ +F MK G +++ +++ F K G V+K +
Sbjct: 550 PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQL 609
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
L +M G + S+++ ++ + + + ++ E ++ Y+ LI+ +G+
Sbjct: 610 LEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGK 669
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
G ID+ + + L KGL P++ TW S + A K + L F+ M + C P+ T
Sbjct: 670 VGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVT 729
Query: 188 AKVLL 192
+L+
Sbjct: 730 YGILI 734
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 1/216 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M + C PD N +D +AG A+FE++K P +S+ +L+ K G
Sbjct: 508 MINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGF 567
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
++ ++ M + G LDT N +++ + + G+ K ++L M+ E + TY
Sbjct: 568 ANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I+ + +D+ LF+ SK ++ +VV ++S I + K I EE++ G
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKDIK 216
P+ T LL A ++ + ++M K++K
Sbjct: 688 LTPNLYTWNSLLDALVKAEEINEALVCFQSM-KELK 722
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%)
Query: 22 RAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTF 81
+A L + V + M++ P ++ L+ AFS + + QM + G +
Sbjct: 145 KANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVH 204
Query: 82 VLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLL 141
+ +++ + + G+ +L M++ S +ADI YN+ I+ +G+ G +D F +
Sbjct: 205 LFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEI 264
Query: 142 HSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
+ GLKPD VT+TS IG K +E+FE +
Sbjct: 265 EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 98/236 (41%), Gaps = 35/236 (14%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTM--------------- 45
M+ GC D +YNI++D + + G +N A + E+MK G PT+
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDR 637
Query: 46 --KSHMV------------------LLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNS 85
+++M+ L+ F K G + + IL ++ + GL + + NS
Sbjct: 638 LDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNS 697
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
+L+ + + + M+ C + TY ILIN + +K +Q + +G
Sbjct: 698 LLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG 757
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQT 201
+KP +++T+ I +K +F+ +G PD ++ SN ++
Sbjct: 758 MKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRA 813
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 1/192 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ +G EP + L+ + + G ++ A ++ ++MK + + + V + +F K G
Sbjct: 194 MQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGK 253
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V +++ +GLK D SM+ + + + + E+ +E YN
Sbjct: 254 VDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNT 313
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I YG AG D+ L + +KG P V+ + + K L++FEEM
Sbjct: 314 MIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA 373
Query: 181 CYPDGGTAKVLL 192
P+ T +L+
Sbjct: 374 A-PNLSTYNILI 384
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 85/192 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ G P+ + NI+VD ++ L++A A+FE+M TP + L+ K G
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR 462
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V + +M S + ++ V S++ + G+ ++ M N +C D+ N
Sbjct: 463 VDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNT 522
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
++ +AG +K +F+ + ++ PD +++ I K E+F M + G
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582
Query: 181 CYPDGGTAKVLL 192
C D +++
Sbjct: 583 CVLDTRAYNIVI 594
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 83/214 (38%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ P ++Y L+ A+ + +F+ M+ +G PT+ L+ F+K G
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V +L++M S L D + N ++ +G++G+ + +E + D TY
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I +A +D+ +F+ L P + + I Y + + E G
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
P +L + ++ V M KD
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD 372
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 79/195 (40%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 72
Y+ L+D +G+ G +++A + E++ + G+TP + + LL A K +++ M
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMK 719
Query: 73 KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFID 132
+ + ++N ++ +F K M+ + +Y +I+ +AG I
Sbjct: 720 ELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIA 779
Query: 133 KMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLL 192
+ LF + G PD + + I S + +FEE G T VLL
Sbjct: 780 EAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLL 839
Query: 193 AACSNEDQTEQVTTV 207
D EQ V
Sbjct: 840 DTLHKNDCLEQAAIV 854
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 8/187 (4%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M + C PD ++ L+D G+ G ++DA V+E M + L+ F G
Sbjct: 438 MDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGR 497
Query: 61 VSK----CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADIS 116
+D++NQ C L+L LN+ ++ + G+ K + ++ D
Sbjct: 498 KEDGHKIYKDMINQNCSPDLQL----LNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDAR 553
Query: 117 TYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
+Y+ILI+ +AGF ++ LF + +G D + I + K + ++ EEM
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613
Query: 177 IDSGCYP 183
G P
Sbjct: 614 KTKGFEP 620
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 100/206 (48%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C D +++LV Y + G + + VF ++ G + ++ + LL+ K + C
Sbjct: 162 CNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCW 221
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+ + MC+ G+ +T+ N + N++ F ++++ L ME E D+ TYN L++ Y
Sbjct: 222 QVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSY 281
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
+ G + + L+++++ + + PD+VT+TS I K + F M+D G PD
Sbjct: 282 CRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDC 341
Query: 186 GTAKVLLAACSNEDQTEQVTTVIRTM 211
+ L+ A E +Q ++ M
Sbjct: 342 MSYNTLIYAYCKEGMMQQSKKLLHEM 367
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 81/167 (48%)
Query: 26 LNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNS 85
+ D V+ M RVGI P + +L + F N + +D L +M + G + D N+
Sbjct: 217 MEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNT 276
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
+++ Y R G+ + + +M D+ TY LI + G + + F + +G
Sbjct: 277 LVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRG 336
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLL 192
+KPD +++ + I AY K+ + + ++ EM+ + PD T KV++
Sbjct: 337 IKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIV 383
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 63/129 (48%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G EPD +YN LV +Y R G L +A +++ M R + P + ++ L+ K G
Sbjct: 262 MEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGR 321
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V + ++M G+K D N+++ Y + G + +++L M S D T +
Sbjct: 322 VREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKV 381
Query: 121 LINRYGQAG 129
++ + + G
Sbjct: 382 IVEGFVREG 390
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G + +YN LV +AG ND + +DM I P + + VLL F K G
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + ++ +M G+ + N++++ Y + + +L +M C DI T+
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI Y +D +F+ + +GL + VT++ + + + E+F+EM+ G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
PD T +LL + + E+ + + K
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 84/194 (43%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M C PD ++ L+ Y ++D VF ++ + G+ ++ +L+ F ++G
Sbjct: 359 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 418
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ E++ +M G+ D +L+ G+ K E+ ++ + I Y
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I + G ++ LF L KG+KP+V+T+T I KK + +M + G
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Query: 181 CYPDGGTAKVLLAA 194
P+ T L+ A
Sbjct: 539 NAPNDCTYNTLIRA 552
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 95/200 (47%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM 71
+ NI+++ + R A +V + ++G P + L+ G VS+ ++++M
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184
Query: 72 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
++G + D NS++N R G ++L ME + +AD+ TY+ +I+ + G I
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244
Query: 132 DKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVL 191
D LF+ + +KG+K VVT+ S + K + + ++M+ P+ T VL
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 192 LAACSNEDQTEQVTTVIRTM 211
L E + ++ + + M
Sbjct: 305 LDVFVKEGKLQEANELYKEM 324
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 93/192 (48%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
+ +G EPD ++N L+ G +++A + + M G P + ++ +++ ++G+
Sbjct: 149 VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGD 208
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S D+L +M + +K D F +++++ R G + ME ++ + TYN
Sbjct: 209 TSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNS 268
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L+ +AG + L + + S+ + P+V+T+ + + K+ E+++EMI G
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 181 CYPDGGTAKVLL 192
P+ T L+
Sbjct: 329 ISPNIITYNTLM 340
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/184 (18%), Positives = 88/184 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC+PD +YN +V+ R+G + A + M+ + + ++ ++ + + G
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + +M G+K NS++ + G++ +L M + ++ T+N+
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L++ + + G + + L++ + ++G+ P+++T+ + + Y + + + M+ +
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 181 CYPD 184
C PD
Sbjct: 364 CSPD 367
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 88/210 (41%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G P+ +YN L+D Y L++A + + M R +P + + L+ + V
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ + K GL + + ++ + + G+ EE+ M + D+ TY IL++
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
G ++K +F+ L + +V +T+ I K +F + G P+
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 507
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
T V+++ + + ++R M++D
Sbjct: 508 VMTYTVMISGLCKKGSLSEANILLRKMEED 537
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 98/222 (44%), Gaps = 10/222 (4%)
Query: 5 GCEPDRASY---NILVDAYGRAGFLN----DAEAVFEDMKRVGITPTMKSHMVLLSAFSK 57
CE D +S N+ R+G ++ DA A+F++M R P++ SA ++
Sbjct: 41 SCERDFSSISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIAR 100
Query: 58 TGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVL-TVMENGSCEADIS 116
T + D Q+ +G+ + + LN M+N + R + VL VM+ G E D +
Sbjct: 101 TKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGY-EPDTT 159
Query: 117 TYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
T+N LI G + + L + G +PDVVT+ S + + L++ +M
Sbjct: 160 TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM 219
Query: 177 IDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMD-KDIKT 217
+ D T ++ + + + ++ + M+ K IK+
Sbjct: 220 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 6/217 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G PD +YN L+ +G +DA + M + I P + + L+ A K G
Sbjct: 212 MEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSM---LNLYGRLGQFGKMEEVLTVMENGSCEADIST 117
VS+ E+ +M + L D + + L +Y RL + EE+ M + C D+ T
Sbjct: 272 VSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDE---AEEMFGFMVSKGCFPDVVT 328
Query: 118 YNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
Y+ILIN Y ++ ++ LF + +G+ + VT+T I Y + EIF M+
Sbjct: 329 YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388
Query: 178 DSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
G +P+ T VLL + + E+ ++ M K+
Sbjct: 389 FCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKN 425
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M MG +P+ YN ++D ++ +++A + M++ GI P + ++ L+S +G
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S +++ M K + D F N++++ + G+ + EE M S + DI TY++
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI +D+ E +F + SKG PDVVT++ I Y K K +++F EM G
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+ T +L+ + + R M
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 92/184 (50%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC PD +Y+IL++ Y ++ + +F +M + G+ ++ +L+ + + G
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
++ E+I +M G+ + N +L+ G+ K +L M+ +ADI TYNI
Sbjct: 377 LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNI 436
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I +AG + ++ L+ +GL PD+ T+T+ + KK L +F +M + G
Sbjct: 437 IIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDG 496
Query: 181 CYPD 184
P+
Sbjct: 497 ILPN 500
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 93/203 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M +G EP ++ L++ + R + DA +F+ M +G P + + ++ K+
Sbjct: 142 MIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ 201
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V D+LN+M K G+ D NS+++ G++ +++ M D+ T+N
Sbjct: 202 VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNA 261
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ + G + + E ++ + + L PD+VT++ I E+F M+ G
Sbjct: 262 LIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Query: 181 CYPDGGTAKVLLAACSNEDQTEQ 203
C+PD T +L+ + E
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEH 344
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 3/207 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ +G + + NIL++ + R L+ A + M ++G P++ + LL+ F +
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDR 166
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V + +QM G K + + N++++ + Q ++L ME D+ TYN
Sbjct: 167 VYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNS 226
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ +G + + + + PDV T+ + I A K+ E +EEMI
Sbjct: 227 LISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRS 286
Query: 181 CYPDGGTAKVL---LAACSNEDQTEQV 204
PD T +L L S D+ E++
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEEM 313
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 89/208 (42%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
+PD +Y++L+ L++AE +F M G P + ++ +L++ + K+ V
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+ +M + G+ +T ++ Y R G+ EE+ M +I TYN+L++
Sbjct: 348 LFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLC 407
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGG 186
G I+K + + G+ D+VT+ I K +I+ + G PD
Sbjct: 408 DNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIW 467
Query: 187 TAKVLLAACSNEDQTEQVTTVIRTMDKD 214
T ++ + + + R M +D
Sbjct: 468 TYTTMMLGLYKKGLRREADALFRKMKED 495
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 88/215 (40%), Gaps = 5/215 (2%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P A ++ L+ A + + ++E M+ +GI + + +LL+ F + +S
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
L +M K G + S+LN + R + + M + ++ YN +I+ +
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
+ +D L + G+ PDVVT+ S I + + M YPD T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 188 AKVLLAACSNEDQTEQV-----TTVIRTMDKDIKT 217
L+ AC E + + + R++D DI T
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVT 293
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 74/188 (39%)
Query: 26 LNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNS 85
L+D+ +F M + P++ LLSA SK + QM G+ + N
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
+LN + R Q L M E I T+ L+N + + + +F + G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVT 205
KP+VV + + I K K L++ M G PD T L++ + + T
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 206 TVIRTMDK 213
++ M K
Sbjct: 242 RMVSCMTK 249
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 105/222 (47%), Gaps = 5/222 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M + G PD +Y+ L+ G +DA + DM I P + + L+ AF K G
Sbjct: 284 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 343
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + E + ++M K + D F +S++N + + + + + +M + C ++ TY+
Sbjct: 344 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYST 403
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI + +A +++ LF+ + +GL + VT+T+ I + + + +F++M+ G
Sbjct: 404 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 463
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIR-----TMDKDIKT 217
+P+ T +LL + + V TM+ DI T
Sbjct: 464 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 505
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 95/206 (46%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C P+ +Y+ L+ + +A + + +F +M + G+ ++ L+ F + + +
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+ QM G+ + N +L+ + G+ K V ++ + E DI TYNI+I
Sbjct: 454 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 513
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
+AG ++ LF L KG+ P+V+ + + I + +K + ++M + G P+
Sbjct: 514 CKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNS 573
Query: 186 GTAKVLLAACSNEDQTEQVTTVIRTM 211
GT L+ A + E +I+ M
Sbjct: 574 GTYNTLIRARLRDGDREASAELIKEM 599
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 99/211 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ E D YN ++D + ++DA +F +M GI P + ++ L+S G
Sbjct: 249 MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 308
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S +L+ M + + + +++++ + + G+ + E++ M S + DI TY+
Sbjct: 309 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 368
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN + +D+ + +F+L+ SK P+VVT+++ I + K K +E+F EM G
Sbjct: 369 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRG 428
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+ T L+ + V + M
Sbjct: 429 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 459
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 5/222 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M +G EPD + + L++ Y + ++DA A+ + M +G P + L+
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S+ +++QM + G + D +++N + G +L ME G EAD+ YN
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 263
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I+ + +D LF + +KG++PDV T++S I + + +MI+
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTT-----VIRTMDKDIKT 217
P+ T L+ A E + + + R++D DI T
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 365
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 97/211 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ +G D +Y+I ++ + R L+ A AV M ++G P + + LL+ + +
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+S +++QM + G K DTF ++++ + + ++ M C+ D+ TY
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
++N + G ID L + + ++ DVV + + I K K L +F EM + G
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
PD T L++ N + + ++ M
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 98/213 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC+PD +Y +V+ + G ++ A ++ + M++ I + + ++ K +
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 273
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ ++ +M G++ D F +S+++ G++ +L+ M ++ T++
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ + + G + + E L+ + + + PD+ T++S I + +FE MI
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 393
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
C+P+ T L+ + E+ + R M +
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQ 426
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 95/211 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M MG +PD ++ L+ ++A A+ + M + G P + ++ +++ K G+
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ +L +M K ++ D + N++++ + + T M+N D+ TY+
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ G L + + + P+VVT+++ I A+ K+ V ++++EMI
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
PD T L+ D+ ++ + M
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 94/208 (45%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
+PD +Y+ L++ + L++A+ +FE M P + ++ L+ F K V + +
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+ +M + GL +T ++++ + + + V M + +I TYNIL++
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGG 186
+ G + K +F+ L ++PD+ T+ I K E+F + G P+
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI 539
Query: 187 TAKVLLAACSNEDQTEQVTTVIRTMDKD 214
+++ + E+ ++++ M +D
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMKED 567
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 77/188 (40%)
Query: 26 LNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNS 85
++DA +F DM + P++ LLSA +K + QM G+ D + +
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
+N + R Q VL M E DI T + L+N Y + I L + G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVT 205
KPD T+T+ I + + ++M+ GC PD T ++ +
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 206 TVIRTMDK 213
++++ M+K
Sbjct: 244 SLLKKMEK 251
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 62/123 (50%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
+Q EPD +YNI+++ +AG + D +F ++ G++P + ++ ++S F + G+
Sbjct: 494 LQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGS 553
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + +L +M + G ++ N+++ R G E++ M + D ST +
Sbjct: 554 KEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGL 613
Query: 121 LIN 123
+ N
Sbjct: 614 VTN 616
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 1/198 (0%)
Query: 14 NILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCK 73
N L+D+ GRA +A+ +F+ +K TP M ++ VLL+ + + N+ + I N M
Sbjct: 268 NCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID 326
Query: 74 SGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDK 133
GLK D N ML R + ++ VM++ ++ +Y I+I + + ++
Sbjct: 327 QGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 386
Query: 134 MEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLA 193
F + GL+PD +T I + +K E+ +EM + G PDG T L+
Sbjct: 387 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Query: 194 ACSNEDQTEQVTTVIRTM 211
+N+ E T + M
Sbjct: 447 LMANQKMPEHATRIYNKM 464
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 98/214 (45%), Gaps = 1/214 (0%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G +PD ++N++++ R+ +DA +F MK G P ++S+ +++ F K ++
Sbjct: 328 GLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 387
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ + M SGL+ D V ++ +G + + E+L M+ D TYN LI
Sbjct: 388 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 447
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ ++ + ++P + T+ + +Y + Y ++EEMI G PD
Sbjct: 448 MANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPD 507
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTM-DKDIKT 217
+ VL+ E ++ + + M DK +KT
Sbjct: 508 DNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKT 541
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 100/247 (40%), Gaps = 37/247 (14%)
Query: 2 QHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNV 61
+ G D +YN ++ + +V E+M G+ TM++ + + AF+
Sbjct: 187 ERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKER 245
Query: 62 SKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVL---------------TVM 106
K I M K K+ +N +L+ GR + GK +VL TV+
Sbjct: 246 KKAVGIFELMKKYKFKIGVETINCLLDSLGR-AKLGKEAQVLFDKLKERFTPNMMTYTVL 304
Query: 107 ENGSC--------------------EADISTYNILINRYGQAGFIDKMEGLFQLLHSKGL 146
NG C + DI +N+++ ++ LF ++ SKG
Sbjct: 305 LNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGP 364
Query: 147 KPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTT 206
P+V ++T I + K+ +E F++M+DSG PD L+ + + + V
Sbjct: 365 CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 424
Query: 207 VIRTMDK 213
+++ M +
Sbjct: 425 LLKEMQE 431
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 97/214 (45%), Gaps = 4/214 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G +PD ++N L+ Y G DA AV + M+ G+ P+ S LL A ++ G+
Sbjct: 181 MEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGH 240
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + I + ++ L D +V +++++Y + G V +M+ +I +N
Sbjct: 241 LKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMD----AKNIVAWNS 296
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L++ A + E L + +G+KPD +TW S Y+ + L++ +M + G
Sbjct: 297 LVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKG 356
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
P+ + + + CS V M ++
Sbjct: 357 VAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEE 390
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 4/188 (2%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D ++N +V R+G A +F +M+ G + + LL S ++ I
Sbjct: 53 DDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIH 112
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
+ + GL+ + + NS++ +Y R G+ +V M+ + ++S++N +++ Y +
Sbjct: 113 GYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMK----DRNLSSWNSILSSYTKL 168
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTA 188
G++D GL + GLKPD+VTW S + Y+ K L + + + M +G P +
Sbjct: 169 GYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSI 228
Query: 189 KVLLAACS 196
LL A +
Sbjct: 229 SSLLQAVA 236
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 8/205 (3%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G +PD ++N L Y G A V MK G+ P + S + S SK GN
Sbjct: 317 MEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGN 376
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEV--LTVMENGSCEADISTY 118
+ +M + G+ + ++++L + G L +EV + +N C+A ++T
Sbjct: 377 FRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVAT- 435
Query: 119 NILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID 178
L++ YG++G + +F + +K L +W + Y+ + F M++
Sbjct: 436 -ALVDMYGKSGDLQSAIEIFWGIKNKSL----ASWNCMLMGYAMFGRGEEGIAAFSVMLE 490
Query: 179 SGCYPDGGTAKVLLAACSNEDQTEQ 203
+G PD T +L+ C N ++
Sbjct: 491 AGMEPDAITFTSVLSVCKNSGLVQE 515
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 91/188 (48%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P+ +Y L+D + ++ + +A + + M G P + L+ K G + + +++
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
+M + G + +S+++ Y ++ + +VL+ M SC ++ Y +I+ +
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
G D+ L Q++ KG +P+VVT+T+ I + CLE+ E M G P+ T
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 188 AKVLLAAC 195
+VL+ C
Sbjct: 817 YRVLIDHC 824
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 93/226 (41%), Gaps = 14/226 (6%)
Query: 1 MQHMGCEPDRASYNILVDAYG------RAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSA 54
M G P YNIL+ + L+ AE + +M G+ +
Sbjct: 398 MVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRC 457
Query: 55 FSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTV---MENGSC 111
G K ++ +M G DT + +LN L KME + M+ G
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNY---LCNASKMELAFLLFEEMKRGGL 514
Query: 112 EADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLE 171
AD+ TY I+++ + +AG I++ F + G P+VVT+T+ I AY K K E
Sbjct: 515 VADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANE 574
Query: 172 IFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM--DKDI 215
+FE M+ GC P+ T L+ Q E+ + M KD+
Sbjct: 575 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV 620
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 80/153 (52%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GCEP++ Y+ L+D + G L++A+ V +M G T+ ++ L+ + K
Sbjct: 665 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR 724
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+L++M ++ + + M++ ++G+ + +++ +ME C+ ++ TY
Sbjct: 725 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 784
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTW 153
+I+ +G G I+ L + + SKG+ P+ VT+
Sbjct: 785 MIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 817
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 81/189 (42%), Gaps = 4/189 (2%)
Query: 14 NILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCK 73
N+LV + R G + A +K P+ ++ L+ AF K + I +M
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 74 SGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDK 133
+ L++D F L L + GK E LT++E + D Y LI+ +A ++
Sbjct: 264 ANLRMDGFTLRCFAY---SLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEE 320
Query: 134 MEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLA 193
+ + P+VVT+++ + KK RC + M+ GCYP L+
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380
Query: 194 A-CSNEDQT 201
A C++ D +
Sbjct: 381 AYCTSGDHS 389
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 101/221 (45%), Gaps = 19/221 (8%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G PD ++Y+ +++ A + A +FE+MKR G+ + ++ +++ +F K G + +
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
N+M + G + ++++ Y + + E+ M + C +I TY+ LI+
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 125 YGQAGFIDKMEGLFQ-LLHSKGL---------------KPDVVTWTSRIGAYSKKKLYVR 168
+ +AG ++K +F+ + SK + +P+VVT+ + + + K
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657
Query: 169 CLEIFEEMIDSGCYPDGGTAKVL---LAACSNEDQTEQVTT 206
++ + M GC P+ L L D+ ++V T
Sbjct: 658 ARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 698
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 87/196 (44%), Gaps = 16/196 (8%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G D +Y I+VD++ +AG + A F +M+ VG TP + ++ L+ A+ K
Sbjct: 509 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 568
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVM-------------- 106
VS ++ M G + +++++ + + GQ K ++ M
Sbjct: 569 VSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK 628
Query: 107 --ENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKK 164
++ S ++ TY L++ + ++ +++ L + +G +P+ + + + I K
Sbjct: 629 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 688
Query: 165 LYVRCLEIFEEMIDSG 180
E+ EM + G
Sbjct: 689 KLDEAQEVKTEMSEHG 704
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 8/197 (4%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G D YN+++ AYG+A A ++F+ MK G P ++ L + V +
Sbjct: 510 GQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEA 569
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ IL +M SG K +M+ Y RLG ++ ME + + Y LIN
Sbjct: 570 QRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLING 629
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLE----IFEEMIDSG 180
+ ++G +++ F+++ G++ + + TS I AYSK V CLE ++++M DS
Sbjct: 630 FAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSK----VGCLEEARRVYDKMKDSE 685
Query: 181 CYPDGGTAKVLLAACSN 197
PD + +L+ C++
Sbjct: 686 GGPDVAASNSMLSLCAD 702
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 101/207 (48%), Gaps = 1/207 (0%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
GC+P +Y ++ +Y R G L+DA ++E M++ G+ P + L++ F+++G V +
Sbjct: 580 GCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEA 639
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
M + G++ + VL S++ Y ++G + V M++ D++ N +++
Sbjct: 640 IQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSL 699
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
G + + E +F L KG DV+++ + + Y + +E+ EEM +SG D
Sbjct: 700 CADLGIVSEAESIFNALREKG-TCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSD 758
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTM 211
+ ++A + + Q + + M
Sbjct: 759 CTSFNQVMACYAADGQLSECCELFHEM 785
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 105/246 (42%), Gaps = 35/246 (14%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G D ++N ++ G G L++AE++ + M+ GI+P K++ +LLS + G+
Sbjct: 331 MLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGD 390
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + ++ K GL DT ++L++ + ++E V+ M+ S D + +
Sbjct: 391 IEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPV 450
Query: 121 LINRYGQAGFIDKMEGLFQLLH------------------SKGL---------------- 146
++ Y G + + + LF+ KGL
Sbjct: 451 IMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSG 510
Query: 147 -KPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVT 205
+ DV+ + I AY K KL+ + L +F+ M + G +PD T L + D ++
Sbjct: 511 QRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQ 570
Query: 206 TVIRTM 211
++ M
Sbjct: 571 RILAEM 576
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 83/204 (40%), Gaps = 35/204 (17%)
Query: 11 ASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQ 70
+++N L+D YG+AG LNDA ++ ++
Sbjct: 306 STFNTLIDLYGKAGRLNDAA-----------------------------------NLFSE 330
Query: 71 MCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGF 130
M KSG+ +DT N+M++ G G + E +L ME D TYNIL++ + AG
Sbjct: 331 MLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGD 390
Query: 131 IDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKV 190
I+ ++ + GL PD VT + + ++K+ + EM + D + V
Sbjct: 391 IEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPV 450
Query: 191 LLAACSNEDQTEQVTTVIRTMDKD 214
++ NE Q + D
Sbjct: 451 IMQMYVNEGLVVQAKALFERFQLD 474
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 96/269 (35%), Gaps = 55/269 (20%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M H G P +Y +LVD YG+AG + +A + M + P + ++ F +G
Sbjct: 171 MAHNGVLPTNNTYGMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGE 230
Query: 61 VSKCEDILNQMC--KSGLKLD--------------------------------------- 79
+ + C K L LD
Sbjct: 231 FDRADRFFKGWCAGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLH 290
Query: 80 --------------TFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
T N++++LYG+ G+ + + M D T+N +I+
Sbjct: 291 FASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTC 350
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
G G + + E L + + KG+ PD T+ + ++ LE + ++ G +PD
Sbjct: 351 GTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDT 410
Query: 186 GTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
T + +L +V VI MD++
Sbjct: 411 VTHRAVLHILCQRKMVAEVEAVIAEMDRN 439
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/266 (19%), Positives = 100/266 (37%), Gaps = 55/266 (20%)
Query: 3 HMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVS 62
H P+ YNI++ A GRAG ++ + +M G+ PT ++ +L+ + K G V
Sbjct: 138 HQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVK 197
Query: 63 KCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGK----------------MEEVLTVM 106
+ + M + D + +++ ++ G+F + ++ +
Sbjct: 198 EALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFP 257
Query: 107 ENGSCEADI---------------------------------------STYNILINRYGQ 127
+NGS ++ + ST+N LI+ YG+
Sbjct: 258 KNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGK 317
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
AG ++ LF + G+ D VT+ + I + ++M + G PD T
Sbjct: 318 AGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKT 377
Query: 188 AKVLLAACSNEDQTEQVTTVIRTMDK 213
+LL+ ++ E R + K
Sbjct: 378 YNILLSLHADAGDIEAALEYYRKIRK 403
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 70/166 (42%), Gaps = 1/166 (0%)
Query: 16 LVDAYGRAGFLNDAEAVFEDMKRV-GITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKS 74
++D Y G +AE VF + + G + + V++ A+ K K + M
Sbjct: 485 VIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQ 544
Query: 75 GLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKM 134
G D NS+ + + + + +L M + C+ TY +I Y + G +
Sbjct: 545 GTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDA 604
Query: 135 EGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L++ + G+KP+ V + S I +++ + ++ F M + G
Sbjct: 605 VDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHG 650
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 84/206 (40%), Gaps = 2/206 (0%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D S +++ Y G + A+A+FE + + + + ++ +++ G + E +
Sbjct: 444 DEHSVPVIMQMYVNEGLVVQAKALFERFQ-LDCVLSSTTLAAVIDVYAEKGLWVEAETVF 502
Query: 69 -NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
+ SG + D N M+ YG+ K + M+N D TYN L
Sbjct: 503 YGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAG 562
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
+D+ + + + G KP T+ + I +Y + L ++++E M +G P+
Sbjct: 563 VDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVV 622
Query: 188 AKVLLAACSNEDQTEQVTTVIRTMDK 213
L+ + E+ R M++
Sbjct: 623 YGSLINGFAESGMVEEAIQYFRMMEE 648
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 3/193 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M ++G +PD S+ I + AY AG ++ A V + MKR + P + + ++ K
Sbjct: 269 MGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEK 328
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V +L++M + G DT+ NS++ + + + ++L+ M+ C D TYN+
Sbjct: 329 VDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNM 388
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKK--KLYVRCLEIFEEMID 178
++ + G D+ +++ + + P V T+T I +K KL C FE MID
Sbjct: 389 VLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEAC-RYFEMMID 447
Query: 179 SGCYPDGGTAKVL 191
G P T ++L
Sbjct: 448 EGIPPYSTTVEML 460
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 82/188 (43%)
Query: 26 LNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNS 85
+N A+ F K GI P+ K++ +L+ +++ + S + ++M + +D N+
Sbjct: 189 VNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNA 248
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
+L+ + G ++ M N + D ++ I I+ Y AG + + +
Sbjct: 249 LLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYD 308
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVT 205
L P+V T+ I K + + +EMI G PD T ++A + + + T
Sbjct: 309 LVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRAT 368
Query: 206 TVIRTMDK 213
++ MD+
Sbjct: 369 KLLSRMDR 376
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 78/189 (41%)
Query: 4 MGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSK 63
G P +Y+ILV + R + A VF++M + ++ LL A K+G+V
Sbjct: 202 FGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDG 261
Query: 64 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN 123
+ +M GLK D + ++ Y G +VL M+ ++ T+N +I
Sbjct: 262 GYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIK 321
Query: 124 RYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYP 183
+ +D L + KG PD T+ S + + R ++ M + C P
Sbjct: 322 TLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLP 381
Query: 184 DGGTAKVLL 192
D T ++L
Sbjct: 382 DRHTYNMVL 390
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 92/185 (49%), Gaps = 4/185 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G S+N L++ Y + G +DA V ++M GI PT ++ + + A G
Sbjct: 299 MRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGR 358
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ ++L+ M D N++++ Y ++G+F + + + G I TYN
Sbjct: 359 IDDARELLSSMAAP----DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNT 414
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ ++G ++ + L + + ++ + PDV+T+T+ + + K E+++EM+ G
Sbjct: 415 LIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG 474
Query: 181 CYPDG 185
PDG
Sbjct: 475 IKPDG 479
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 7/211 (3%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
P +YN L+D +G L A+ + E+M I P + ++ L+ F K GN+S +
Sbjct: 406 HPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATE 465
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQ----FGKMEEVLTVMENGSCEADISTYNILI 122
+ ++M + G+K D + + RLG F EE++ + D++ YN+ I
Sbjct: 466 VYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHA---PDLTIYNVRI 522
Query: 123 NRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCY 182
+ + G + K + + GL PD VT+T+ I Y + + +++EM+ Y
Sbjct: 523 DGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLY 582
Query: 183 PDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
P T VL+ + + EQ M K
Sbjct: 583 PSVITYFVLIYGHAKAGRLEQAFQYSTEMKK 613
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 4/192 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G P ++N ++D+ +AG L + ++ +MKR I + ++ +L++ FSK G
Sbjct: 229 MIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGK 288
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + M +SG + + N ++ Y + G F V M N STYNI
Sbjct: 289 MEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNI 348
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
I G ID L S PDVV++ + + Y K +V +F+++
Sbjct: 349 YICALCDFGRIDDARELL----SSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGD 404
Query: 181 CYPDGGTAKVLL 192
+P T L+
Sbjct: 405 IHPSIVTYNTLI 416
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 95/207 (45%), Gaps = 6/207 (2%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
PD YN+ +D + G L A + RVG+ P ++ ++ + + G ++
Sbjct: 513 PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNL 572
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVL---TVMENGSCEADISTYNILINR 124
++M + +L V+ + +YG + G++E+ T M+ ++ T+N L+
Sbjct: 573 YDEMLRK--RLYPSVITYFVLIYGH-AKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYG 629
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+AG ID+ + +G+ P+ ++T I + + +++++EM+D PD
Sbjct: 630 MCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPD 689
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTM 211
G T + L + ++ +V + R +
Sbjct: 690 GYTHRALFKHLEKDHESREVEFLERLL 716
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 82/179 (45%)
Query: 33 FEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGR 92
FE M R G P++++ ++L + ++K + M + G+ N+ML+ +
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 93 LGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVT 152
G +++++ M+ + E TYNILIN + + G +++ + G +
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 153 WTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+ I Y K+ L+ + +EM+++G YP T + + A + + + ++ +M
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 369
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 102/203 (50%), Gaps = 2/203 (0%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 72
+NIL++ + + G ++DA+ VF+++ + + PT+ S L++ + K GN+ + + +QM
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQME 302
Query: 73 KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVM-ENGSCEADISTYNILINRYGQAGFI 131
KS + D F ++++N + + + M + G D+ + LI+ + + G I
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV-IFTTLIHGHSRNGEI 361
Query: 132 DKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVL 191
D M+ +Q + SKGL+PD+V + + + + K V I + MI G PD T L
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTL 421
Query: 192 LAACSNEDQTEQVTTVIRTMDKD 214
+ E + + MD++
Sbjct: 422 IDGFCRGGDVETALEIRKEMDQN 444
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 95/205 (46%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
+P S+N L++ Y + G L++ + M++ P + ++ L++A K +
Sbjct: 272 QPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHG 331
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+ ++MCK GL + + ++++ + R G+ M+E M + + DI YN L+N +
Sbjct: 332 LFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFC 391
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGG 186
+ G + + + +GL+PD +T+T+ I + + LEI +EM +G D
Sbjct: 392 KNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRV 451
Query: 187 TAKVLLAACSNEDQTEQVTTVIRTM 211
L+ E + +R M
Sbjct: 452 GFSALVCGMCKEGRVIDAERALREM 476
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G +PD YN LV+ + + G L A + + M R G+ P ++ L+ F + G+
Sbjct: 371 MLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGD 430
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V +I +M ++G++LD ++++ + G+ E L M + D TY +
Sbjct: 431 VETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTM 490
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+++ + + G L + + S G P VVT+ + K + + M++ G
Sbjct: 491 MMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIG 550
Query: 181 CYPDGGTAKVLL 192
PD T LL
Sbjct: 551 VVPDDITYNTLL 562
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 2/189 (1%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G P+ + L+ + R G ++ + ++ M G+ P + + L++ F K G++
Sbjct: 340 GLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAA 399
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+I++ M + GL+ D ++++ + R G E+ M+ E D ++ L+
Sbjct: 400 RNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCG 459
Query: 125 YGQAG-FIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYP 183
+ G ID L ++L + G+KPD VT+T + A+ KK ++ +EM G P
Sbjct: 460 MCKEGRVIDAERALREMLRA-GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVP 518
Query: 184 DGGTAKVLL 192
T VLL
Sbjct: 519 SVVTYNVLL 527
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 4/176 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G PD+ +Y L+D + R G + A + ++M + GI L+ K G
Sbjct: 406 MIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGR 465
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V E L +M ++G+K D M++ + + G ++L M++ + TYN+
Sbjct: 466 VIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNV 525
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKK----KLYVRCLEI 172
L+N + G + + L + + G+ PD +T+ + + + + K Y++ EI
Sbjct: 526 LLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEI 581
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 74/174 (42%), Gaps = 4/174 (2%)
Query: 15 ILVDA----YGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQ 70
LVDA Y GF+ DA F ++ ++ LL K +
Sbjct: 171 FLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYME 230
Query: 71 MCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGF 130
+ +G L+ +V N ++N + + G ++V + S + + ++N LIN Y + G
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 131 IDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+D+ L + +PDV T+++ I A K+ +F+EM G P+
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPN 344
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 6/192 (3%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C PD +YN L+ + + + + VF +M + G+ ++ L+ F + + +
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 411
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTV---MENGSCEADISTYNILI 122
+ QM G+ D N +L+ L G +E L V M+ + DI TY +I
Sbjct: 412 MVFKQMVSDGVHPDIMTYNILLD---GLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMI 468
Query: 123 NRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCY 182
+AG ++ LF L KG+KP+VVT+T+ + + +K L +F EM + G
Sbjct: 469 EALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPL 528
Query: 183 PDGGTAKVLLAA 194
P+ GT L+ A
Sbjct: 529 PNSGTYNTLIRA 540
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 96/214 (44%), Gaps = 1/214 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M MG +PD ++ LV + ++A A+ E M G P + ++ +++ K G
Sbjct: 171 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 230
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
++LN+M K ++ D + N++++ + ++ ME + D+ TYN
Sbjct: 231 PDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNP 290
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS- 179
LI+ G L + K + PD+V + + I A+ K+ V ++++EM+ S
Sbjct: 291 LISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSK 350
Query: 180 GCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
C+PD L+ + E+ V R M +
Sbjct: 351 HCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQ 384
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 98/214 (45%), Gaps = 6/214 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ++G + +Y+I ++ + R L+ A A+ M ++G P++ + LL+ F
Sbjct: 101 MQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR 160
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMEN---GSCEADIST 117
+S+ +++QM + G + DT ++++ L Q K E + ++E C+ D+ T
Sbjct: 161 ISEAVALVDQMVEMGYQPDTVTFTTLVH---GLFQHNKASEAVALVERMVVKGCQPDLVT 217
Query: 118 YNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
Y +IN + G D L + ++ DVV + + I K K ++F +M
Sbjct: 218 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKME 277
Query: 178 DSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
G PD T L++ N + + ++ M
Sbjct: 278 TKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 80/184 (43%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M +G P + N L++ + +++A A+ + M +G P + L+ +
Sbjct: 136 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 195
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S+ ++ +M G + D +++N + G+ +L ME G EAD+ YN
Sbjct: 196 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNT 255
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I+ + +D LF + +KG+KPDV T+ I + + +M++
Sbjct: 256 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN 315
Query: 181 CYPD 184
PD
Sbjct: 316 INPD 319
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 75/188 (39%)
Query: 26 LNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNS 85
L+DA +F DM + P++ LLSA +K + QM G+ + + +
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
+N + R Q +L M I T N L+N + I + L + G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVT 205
+PD VT+T+ + + + + E M+ GC PD T ++ + +
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 206 TVIRTMDK 213
++ M+K
Sbjct: 236 NLLNKMEK 243
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 70/156 (44%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P ++ L+ A + + ++ E M+ +GI+ + ++ + ++ F + +S I
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
L +M K G LNS+LN + + + ++ M + D T+ L++ Q
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKK 163
+ L + + KG +PD+VT+ + I K+
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 228
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 64/149 (42%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G PD +YNIL+D G + A VFE M++ + + ++ ++ A K G V
Sbjct: 421 GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
D+ + G+K + +M++ + R G + + + M+ + TYN LI
Sbjct: 481 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTW 153
+ G L + + S G D T+
Sbjct: 541 RLRDGDEAASAELIKEMRSCGFAGDASTF 569
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 101/213 (47%), Gaps = 1/213 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M H +P+ + +V+ Y G + +A F MK +G+ P + L+ F +
Sbjct: 522 MLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIND 581
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ ++++ M + G+K D ++++N + +G + EE+ T M G + DI ++I
Sbjct: 582 MDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSI 641
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID-S 179
L Y +AG +K E + + G++P+VV +T I + + ++++++M
Sbjct: 642 LAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIV 701
Query: 180 GCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMD 212
G P+ T + L+ Q + +++ M+
Sbjct: 702 GLSPNLTTYETLIWGFGEAKQPWKAEELLKDME 734
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 109/250 (43%), Gaps = 37/250 (14%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVG-ITPTMKSHMVLLSAFSKTG 59
M+ GC+P +++N L+ YG+ G L ++ + + M R + P ++ +L+ A+
Sbjct: 415 MKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQR 474
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLG------------------------- 94
+ + +I+ +M G+K D N++ Y R+G
Sbjct: 475 KIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTC 534
Query: 95 --------QFGKMEEVLTV---MENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHS 143
+ GKMEE L M+ ++ +N LI + +D + + L+
Sbjct: 535 GTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEE 594
Query: 144 KGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQ 203
G+KPDVVT+++ + A+S RC EI+ +M++ G PD +L + + E+
Sbjct: 595 FGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEK 654
Query: 204 VTTVIRTMDK 213
++ M K
Sbjct: 655 AEQILNQMRK 664
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G +PD +++ L++A+ G + E ++ DM GI P + + +L +++ G
Sbjct: 592 MEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGE 651
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSC-----EADI 115
K E ILNQM K G++ + + +++ + G+ K +V M C ++
Sbjct: 652 PEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM----CGIVGLSPNL 707
Query: 116 STYNILINRYGQAGFIDKMEGLFQLLHSKGLKP 148
+TY LI +G+A K E L + + K + P
Sbjct: 708 TTYETLIWGFGEAKQPWKAEELLKDMEGKNVVP 740
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 91/199 (45%), Gaps = 8/199 (4%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D S L++ G +A ++F + G P++ ++ L++A ++ + ++
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
+++ K+GLK DT + N+++N G + ++ M+ C+ ST+N LI YG+
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 129 GFIDKMEGLFQ-LLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
G +++ L +L + L+P+ T + A+ ++ I +M G PD T
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 188 AKVLLAA-------CSNED 199
L A C+ ED
Sbjct: 498 FNTLAKAYARIGSTCTAED 516
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 80/159 (50%), Gaps = 1/159 (0%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G +P +Y LV A R + ++ +++ G+ P +++A S++GN+ +
Sbjct: 349 GHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQA 408
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVM-ENGSCEADISTYNILIN 123
I +M +SG K N+++ YG++G+ + +L +M + + + T NIL+
Sbjct: 409 MKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQ 468
Query: 124 RYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSK 162
+ I++ + + S G+KPDVVT+ + AY++
Sbjct: 469 AWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYAR 507
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 80/189 (42%), Gaps = 20/189 (10%)
Query: 26 LNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNS 85
L D EAVF+D + G V+ S + G+V ++N + + G + +S
Sbjct: 285 LADVEAVFKDSEE-GRVQLRSFPCVICSGGTTCGDVRSRTKLMNGLIERGRPQEA---HS 340
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
+ N T++E G + + TY L+ + + L + G
Sbjct: 341 IFN---------------TLIEEGH-KPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVT 205
LKPD + + + I A S+ + ++IFE+M +SGC P T L+ + E+ +
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
Query: 206 TVIRTMDKD 214
++ M +D
Sbjct: 445 RLLDMMLRD 453
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 1/198 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G D +YN L+ +G +DA + DM + I P + + L+ F K GN
Sbjct: 202 MEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGN 261
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + +++ +M +S + + NS++N G+ ++ +M + C ++ TYN
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNT 321
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ + + +D+ LFQ + +G D+ T+ + I Y + L+IF M+
Sbjct: 322 LISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381
Query: 181 CYPDGGTAKVLLAA-CSN 197
PD T +LL C N
Sbjct: 382 VTPDIITHCILLHGLCVN 399
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 91/192 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G EP+ YN L+D + G LN A + +M++ G+ + ++ LL+ +G
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S +L M K + D ++++++ + G + +E+ M S + + TYN
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+IN G + + F L+ SKG P+VVT+ + I + K ++ +++F+ M G
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346
Query: 181 CYPDGGTAKVLL 192
D T L+
Sbjct: 347 FNADIFTYNTLI 358
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G D S+ IL+ + R L+ A +V M ++G P++ + LL F
Sbjct: 97 MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ ++ M KSG + + V N++++ + G+ E+L ME AD+ TYN
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L+ +G + + + + + PDVVT+T+ I + K+ E+++EMI S
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276
Query: 181 CYPDGGT 187
P+ T
Sbjct: 277 VDPNNVT 283
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 87/194 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M +G EP ++ L+ + + DA ++ M + G P + + L+ K G
Sbjct: 132 MMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGE 191
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
++ ++LN+M K GL D N++L G++ +L M S D+ T+
Sbjct: 192 LNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTA 251
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ + + G +D+ + L++ + + P+ VT+ S I + F+ M G
Sbjct: 252 LIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG 311
Query: 181 CYPDGGTAKVLLAA 194
C+P+ T L++
Sbjct: 312 CFPNVVTYNTLISG 325
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 86/208 (41%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
+P+ +YN +++ G L DA+ F+ M G P + ++ L+S F K V +
Sbjct: 278 DPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMK 337
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+ +M G D F N++++ Y ++G+ ++ M + DI T+ IL++
Sbjct: 338 LFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLC 397
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGG 186
G I+ F + +V + I K + E+F + G PD
Sbjct: 398 VNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDAR 457
Query: 187 TAKVLLAACSNEDQTEQVTTVIRTMDKD 214
T +++ + +IR M ++
Sbjct: 458 TYTIMILGLCKNGPRREADELIRRMKEE 485
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 74/178 (41%)
Query: 34 EDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRL 93
+ M+ GI+ + S +L+ F + +S +L +M K G + S+L+ + +
Sbjct: 95 QKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV 154
Query: 94 GQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTW 153
+ G ++ +M E ++ YN LI+ + G ++ L + KGL DVVT+
Sbjct: 155 NRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTY 214
Query: 154 TSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+ + + + +M+ PD T L+ + ++ + + M
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM 272
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 6/214 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G D + +L+++YG+AG + ++ +F+ MK +G+ T+KS+ L + G
Sbjct: 176 MPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGR 235
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCE---ADIST 117
+ N+M G++ N M L+G ++E L E+ D +T
Sbjct: 236 YMMAKRYFNKMVSEGVEPTRHTYNLM--LWGFFLSL-RLETALRFFEDMKTRGISPDDAT 292
Query: 118 YNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
+N +IN + + +D+ E LF + + P VV++T+ I Y L IFEEM
Sbjct: 293 FNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMR 352
Query: 178 DSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
SG P+ T LL + + + +++ M
Sbjct: 353 SSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNM 386
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 56/138 (40%), Gaps = 1/138 (0%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P SY ++ Y ++D +FE+M+ GI P ++ LL G + + ++I
Sbjct: 323 PSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNI 382
Query: 68 L-NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
L N M K D + +L + G EVL M + A+ Y +LI
Sbjct: 383 LKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQC 442
Query: 127 QAGFIDKMEGLFQLLHSK 144
+A ++ L L K
Sbjct: 443 KASAYNRAIKLLDTLIEK 460
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 6/215 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC PD Y L+ + +DA V E +K G + + ++ +L+ F N
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN 561
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
K ++L M K G K D+ N++++ +G+ F +E ++ M + ++TY
Sbjct: 562 AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 121 LINRYGQAGFIDKMEGLFQL--LHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID 178
+I+ Y G +D+ LF+ LHSK + P+ V + I A+SK + + L + EEM
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSK-VNPNTVIYNILINAFSKLGNFGQALSLKEEMKM 680
Query: 179 SGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
P+ T L + + Q E T+++ MD+
Sbjct: 681 KMVRPNVETYNALFKCLNEKTQGE---TLLKLMDE 712
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 98/262 (37%), Gaps = 71/262 (27%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAV--------------------------------- 32
C P+ +YN L+D Y RAG L A+ V
Sbjct: 402 CVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAV 461
Query: 33 --FEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC----EDILNQMC-------------- 72
F DM++ G+ + ++M L+ A NV K E +L C
Sbjct: 462 VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 73 -----------------KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADI 115
+ G LD N ++ L+ K+ E+LT ME + D
Sbjct: 522 CQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDS 581
Query: 116 STYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEE 175
TYN LI+ +G+ + +E + + + GL P V T+ + I AY L++F++
Sbjct: 582 ITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Query: 176 M-IDSGCYPDGGTAKVLLAACS 196
M + S P+ +L+ A S
Sbjct: 642 MGLHSKVNPNTVIYNILINAFS 663
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 103/220 (46%), Gaps = 10/220 (4%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDM--KRVGITPTMKSHMV----LLSA 54
M + PD + IL++ ++ +++A VFE M KR +K+ + L+
Sbjct: 320 MDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDG 379
Query: 55 FSKTGNVSKCEDILNQM-CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEA 113
K G + + E++L +M + + N +++ Y R G+ +EV++ M+ +
Sbjct: 380 LCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKP 439
Query: 114 DISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIF 173
++ T N ++ + ++ F + +G+K +VVT+ + I A + + +
Sbjct: 440 NVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWY 499
Query: 174 EEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
E+M+++GC PD AK+ A S Q + IR ++K
Sbjct: 500 EKMLEAGCSPD---AKIYYALISGLCQVRRDHDAIRVVEK 536
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 1/140 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMK-RVGITPTMKSHMVLLSAFSKTG 59
M+ G +P +Y ++DAY G L++A +F+DM + P + +L++AFSK G
Sbjct: 607 MREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG 666
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
N + + +M ++ + N++ Q + +++ M SCE + T
Sbjct: 667 NFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITME 726
Query: 120 ILINRYGQAGFIDKMEGLFQ 139
IL+ R + + K+ Q
Sbjct: 727 ILMERLSGSDELVKLRKFMQ 746
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 89/216 (41%), Gaps = 9/216 (4%)
Query: 8 PDRASYNILVDAYGRAGFLNDAE--AVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
P+R + +I++ + L + + A+ G++P +S+ K +
Sbjct: 220 PNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAW 279
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
DIL+ + K+ L+ N++L+ GR +M +++ M+ D+ T ILIN
Sbjct: 280 DILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTL 339
Query: 126 GQAGFIDKMEGLFQLLHSKG------LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM-ID 178
++ +D+ +F+ + K +K D + + + I K E+ M ++
Sbjct: 340 CKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLE 399
Query: 179 SGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
C P+ T L+ + E V+ M +D
Sbjct: 400 ERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED 435
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 6/215 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC PD Y L+ + +DA V E +K G + + ++ +L+ F N
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN 561
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
K ++L M K G K D+ N++++ +G+ F +E ++ M + ++TY
Sbjct: 562 TEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 121 LINRYGQAGFIDKMEGLFQL--LHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID 178
+I+ Y G +D+ LF+ LHSK + P+ V + I A+SK + + L + EEM
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSK-VNPNTVIYNILINAFSKLGNFGQALSLKEEMKM 680
Query: 179 SGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
P+ T L + + Q E T+++ MD+
Sbjct: 681 KMVRPNVETYNALFKCLNEKTQGE---TLLKLMDE 712
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 98/262 (37%), Gaps = 71/262 (27%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAV--------------------------------- 32
C P+ +YN L+D Y RAG L A+ V
Sbjct: 402 CAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAV 461
Query: 33 --FEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC----EDILNQMC-------------- 72
F DM++ G+ + ++M L+ A NV K E +L C
Sbjct: 462 VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 73 -----------------KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADI 115
+ G LD N ++ L+ K+ E+LT ME + D
Sbjct: 522 CQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDS 581
Query: 116 STYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEE 175
TYN LI+ +G+ + +E + + + GL P V T+ + I AY L++F++
Sbjct: 582 ITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Query: 176 M-IDSGCYPDGGTAKVLLAACS 196
M + S P+ +L+ A S
Sbjct: 642 MGLHSKVNPNTVIYNILINAFS 663
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 103/220 (46%), Gaps = 10/220 (4%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDM--KRVGITPTMKSHMV----LLSA 54
M + PD + IL++ ++ +++A VFE M KR +K+ + L+
Sbjct: 320 MDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDG 379
Query: 55 FSKTGNVSKCEDILNQM-CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEA 113
K G + + E++L +M + + N +++ Y R G+ +EV++ M+ +
Sbjct: 380 LCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKP 439
Query: 114 DISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIF 173
++ T N ++ + ++ F + +G+K +VVT+ + I A + + +
Sbjct: 440 NVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWY 499
Query: 174 EEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
E+M+++GC PD AK+ A S Q + IR ++K
Sbjct: 500 EKMLEAGCSPD---AKIYYALISGLCQVRRDHDAIRVVEK 536
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 1/140 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMK-RVGITPTMKSHMVLLSAFSKTG 59
M+ G +P +Y ++DAY G L++A +F+DM + P + +L++AFSK G
Sbjct: 607 MREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG 666
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
N + + +M ++ + N++ Q + +++ M SCE + T
Sbjct: 667 NFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITME 726
Query: 120 ILINRYGQAGFIDKMEGLFQ 139
IL+ R + + K+ Q
Sbjct: 727 ILMERLSGSDELVKLRKFMQ 746
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 89/216 (41%), Gaps = 9/216 (4%)
Query: 8 PDRASYNILVDAYGRAGFLNDAE--AVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
P+R + +I++ + L + + A+ G++P +S+ K +
Sbjct: 220 PNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAW 279
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
DIL+ + K+ L+ N++L+ GR +M +++ M+ D+ T ILIN
Sbjct: 280 DILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTL 339
Query: 126 GQAGFIDKMEGLFQLLHSKG------LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM-ID 178
++ +D+ +F+ + K +K D + + + I K E+ M ++
Sbjct: 340 CKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLE 399
Query: 179 SGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
C P+ T L+ + E V+ M +D
Sbjct: 400 ERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED 435
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 6/215 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC PD Y L+ + +DA V E +K G + + ++ +L+ F N
Sbjct: 502 MLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN 561
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
K ++L M K G K D+ N++++ +G+ F +E ++ M + ++TY
Sbjct: 562 AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 121 LINRYGQAGFIDKMEGLFQL--LHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID 178
+I+ Y G +D+ LF+ LHSK + P+ V + I A+SK + + L + EEM
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSK-VNPNTVIYNILINAFSKLGNFGQALSLKEEMKM 680
Query: 179 SGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
P+ T L + + Q E T+++ MD+
Sbjct: 681 KMVRPNVETYNALFKCLNEKTQGE---TLLKLMDE 712
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 98/262 (37%), Gaps = 71/262 (27%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAV--------------------------------- 32
C P+ +YN L+D Y RAG L A+ V
Sbjct: 402 CVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAV 461
Query: 33 --FEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC----EDILNQMC-------------- 72
F DM++ G+ + ++M L+ A NV K E +L C
Sbjct: 462 VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 73 -----------------KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADI 115
+ G LD N ++ L+ K+ E+LT ME + D
Sbjct: 522 CQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDS 581
Query: 116 STYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEE 175
TYN LI+ +G+ + +E + + + GL P V T+ + I AY L++F++
Sbjct: 582 ITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Query: 176 M-IDSGCYPDGGTAKVLLAACS 196
M + S P+ +L+ A S
Sbjct: 642 MGLHSKVNPNTVIYNILINAFS 663
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 103/220 (46%), Gaps = 10/220 (4%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDM--KRVGITPTMKSHMV----LLSA 54
M + PD + IL++ ++ +++A VFE M KR +K+ + L+
Sbjct: 320 MDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDG 379
Query: 55 FSKTGNVSKCEDILNQM-CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEA 113
K G + + E++L +M + + N +++ Y R G+ +EV++ M+ +
Sbjct: 380 LCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKP 439
Query: 114 DISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIF 173
++ T N ++ + ++ F + +G+K +VVT+ + I A + + +
Sbjct: 440 NVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWY 499
Query: 174 EEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
E+M+++GC PD AK+ A S Q + IR ++K
Sbjct: 500 EKMLEAGCSPD---AKIYYALISGLCQVRRDHDAIRVVEK 536
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/216 (19%), Positives = 89/216 (41%), Gaps = 9/216 (4%)
Query: 8 PDRASYNILVDAYGRAGFLNDAE--AVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
P+R + +I++ + L + + A+ G++P +S+ K +
Sbjct: 220 PNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAW 279
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
DIL+ + K+ L+ N++L+ GR +M +++ M+ D+ T ILIN
Sbjct: 280 DILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTL 339
Query: 126 GQAGFIDKMEGLFQLLHSKG------LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM-ID 178
++ +D+ +F+ + K +K D + + + I K E+ M ++
Sbjct: 340 CKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLE 399
Query: 179 SGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
C P+ T L+ + E V+ M +D
Sbjct: 400 ERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED 435
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 1/198 (0%)
Query: 14 NILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCK 73
N L+D+ GRA +A+ +F+ +K TP M ++ VLL+ + + N+ + I N M
Sbjct: 268 NCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID 326
Query: 74 SGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDK 133
GLK D N ML R + ++ VM++ ++ +Y I+I + + ++
Sbjct: 327 HGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 386
Query: 134 MEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLA 193
F + GL+PD +T I + +K E+ +EM + G PDG T L+
Sbjct: 387 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Query: 194 ACSNEDQTEQVTTVIRTM 211
+N+ E T + M
Sbjct: 447 LMANQKMPEHGTRIYNKM 464
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 99/214 (46%), Gaps = 1/214 (0%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G +PD ++N++++ R+ +DA +F MK G P ++S+ +++ F K ++
Sbjct: 328 GLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 387
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ + M SGL+ D V ++ +G + + E+L M+ D TYN LI
Sbjct: 388 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 447
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ ++ + ++P + T+ + +Y + Y +++EMI G PD
Sbjct: 448 MANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPD 507
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTM-DKDIKT 217
+ VL+ +E ++ + + M DK +KT
Sbjct: 508 DNSYTVLIRGLISEGKSREACRYLEEMLDKGMKT 541
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 2/181 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G P+ SY I++ + + + A F+DM G+ P + L++ F
Sbjct: 359 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKK 418
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ ++L +M + G D N+++ L + M E I T+N+
Sbjct: 419 LDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNM 478
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRI-GAYSKKKLYVRCLEIFEEMIDS 179
++ Y A + ++ + KG+ PD ++T I G S+ K C EEM+D
Sbjct: 479 IMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREAC-RYLEEMLDK 537
Query: 180 G 180
G
Sbjct: 538 G 538
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D SY L+ Y G++ +A+ +F+++ + S ++S +++TGN + ++
Sbjct: 199 DVVSYTALIKGYASRGYIENAQKLFDEIPVKDVV----SWNAMISGYAETGNYKEALELF 254
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKME---EVLTVMENGSCEADISTYNILINRY 125
M K+ ++ D ++M+ + Q G +E +V +++ +++ N LI+ Y
Sbjct: 255 KDMMKTNVRPDE---STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLY 311
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
+ G ++ GLF+ L K DV++W + IG Y+ LY L +F+EM+ SG P+
Sbjct: 312 SKCGELETACGLFERLPYK----DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPND 367
Query: 186 GTAKVLLAACSNEDQTEQVTTVIRTMDKDIK 216
T +L AC++ + + +DK +K
Sbjct: 368 VTMLSILPACAHLGAIDIGRWIHVYIDKRLK 398
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 94/196 (47%), Gaps = 8/196 (4%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
EP+ +N + + + A ++ M +G+ P + +L + +K+ + +
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
I + K G LD +V S++++Y Q G++E+ V + S D+ +Y LI Y
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYV---QNGRLEDAHKVFDK-SPHRDVVSYTALIKGYA 211
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGG 186
G+I+ + LF + K DVV+W + I Y++ Y LE+F++M+ + PD
Sbjct: 212 SRGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDES 267
Query: 187 TAKVLLAACSNEDQTE 202
T +++AC+ E
Sbjct: 268 TMVTVVSACAQSGSIE 283
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 72/170 (42%), Gaps = 6/170 (3%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D S+N L+ Y +A +F++M R G TP + + +L A + G + I
Sbjct: 331 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH 390
Query: 69 NQMCK--SGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+ K G+ + + S++++Y + G +V N +S++N +I +
Sbjct: 391 VYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVF----NSILHKSLSSWNAMIFGFA 446
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
G D LF + G++PD +T+ + A S + IF M
Sbjct: 447 MHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTM 496
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 1/198 (0%)
Query: 14 NILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCK 73
N L+D+ GRA +A+ +F+ +K TP M ++ VLL+ + + N+ + I N M
Sbjct: 267 NCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMID 325
Query: 74 SGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDK 133
GLK D N ML R + ++ VM++ ++ +Y I+I + + ++
Sbjct: 326 HGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 385
Query: 134 MEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLA 193
F + GL+PD +T I + +K E+ +EM + G PDG T L+
Sbjct: 386 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 445
Query: 194 ACSNEDQTEQVTTVIRTM 211
+N+ E T + M
Sbjct: 446 LMANQKMPEHGTRIYNKM 463
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 99/214 (46%), Gaps = 1/214 (0%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G +PD ++N++++ R+ +DA +F MK G P ++S+ +++ F K ++
Sbjct: 327 GLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 386
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ + M SGL+ D V ++ +G + + E+L M+ D TYN LI
Sbjct: 387 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 446
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ ++ + ++P + T+ + +Y + Y +++EMI G PD
Sbjct: 447 MANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPD 506
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTM-DKDIKT 217
+ VL+ +E ++ + + M DK +KT
Sbjct: 507 DNSYTVLIRGLISEGKSREACRYLEEMLDKGMKT 540
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 102/252 (40%), Gaps = 47/252 (18%)
Query: 2 QHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNV 61
+ G D +YN ++ + +V E+M G+ TM++ + + AF+
Sbjct: 186 ERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKER 244
Query: 62 SKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVL---------------TVM 106
K I M K K+ +N +L+ GR + GK +VL TV+
Sbjct: 245 KKAVGIFELMKKYKFKIGVETINCLLDSLGR-AKLGKEAQVLFDKLKERFTPNMMTYTVL 303
Query: 107 ENGSC--------------------EADISTYNILINRYGQAGFIDKME-----GLFQLL 141
NG C + DI +N+++ G + M+ LF ++
Sbjct: 304 LNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLE-----GLLRSMKKSDAIKLFHVM 358
Query: 142 HSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQT 201
SKG P+V ++T I + K+ +E F++M+DSG PD L+ + +
Sbjct: 359 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 418
Query: 202 EQVTTVIRTMDK 213
+ V +++ M +
Sbjct: 419 DTVYELLKEMQE 430
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 2/181 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G P+ SY I++ + + + A F+DM G+ P + L++ F
Sbjct: 358 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKK 417
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ ++L +M + G D N+++ L + M E I T+N+
Sbjct: 418 LDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNM 477
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRI-GAYSKKKLYVRCLEIFEEMIDS 179
++ Y A + ++ + KG+ PD ++T I G S+ K C EEM+D
Sbjct: 478 IMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREAC-RYLEEMLDK 536
Query: 180 G 180
G
Sbjct: 537 G 537
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 100/204 (49%), Gaps = 18/204 (8%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G E + S+N ++ + R+G+ +A +F+ + +G P + +L + +
Sbjct: 208 MESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEM 267
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQ-------FGKMEEVLTVMENGSCEA 113
++ I + K GL D V+++M+++YG+ G F + E +ME G C A
Sbjct: 268 LNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFE----MMEAGVCNA 323
Query: 114 DISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIF 173
I+ + + G +DK +F+L + ++ +VV+WTS I ++ + LE+F
Sbjct: 324 YITGLS-------RNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELF 376
Query: 174 EEMIDSGCYPDGGTAKVLLAACSN 197
EM +G P+ T +L AC N
Sbjct: 377 REMQVAGVKPNHVTIPSMLPACGN 400
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVL--------LSAFSKT 58
+P S++ L+ A +A + VF M G+ P SH++ LSAF K
Sbjct: 78 DPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIP--DSHVLPNLFKVCAELSAF-KV 134
Query: 59 GNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTY 118
G C C SGL +D FV SM ++Y R G+ G +V M + D+ T
Sbjct: 135 GKQIHCVS-----CVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMS----DKDVVTC 185
Query: 119 NILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID 178
+ L+ Y + G ++++ + + S G++ ++V+W + +++ + + +F+++
Sbjct: 186 SALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHH 245
Query: 179 SGCYPDGGTAKVLLAACSNED 199
G PD T +L + + +
Sbjct: 246 LGFCPDQVTVSSVLPSVGDSE 266
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 84/201 (41%), Gaps = 4/201 (1%)
Query: 14 NILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCK 73
N + R G ++ A +FE K + + S +++ ++ G + ++ +M
Sbjct: 322 NAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQV 381
Query: 74 SGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDK 133
+G+K + + SML G + G ++ + LI+ Y + G I+
Sbjct: 382 AGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINL 441
Query: 134 MEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLA 193
+ +F ++ +K L V W S + +S + IFE ++ + PD + LL+
Sbjct: 442 SQIVFNMMPTKNL----VCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLS 497
Query: 194 ACSNEDQTEQVTTVIRTMDKD 214
AC T++ + M ++
Sbjct: 498 ACGQVGLTDEGWKYFKMMSEE 518
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 90/202 (44%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM 71
SYN ++D +A + +A +M+ GI+P + + LS +S G+V K +L ++
Sbjct: 427 SYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKL 486
Query: 72 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
G K D + ++N R + + M E + TYNILI G
Sbjct: 487 LVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDT 546
Query: 132 DKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVL 191
D+ LF + GL PD+ + + I ++ K + + E+ + M+ G PD T L
Sbjct: 547 DRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTL 606
Query: 192 LAACSNEDQTEQVTTVIRTMDK 213
+ A S + + + ++++
Sbjct: 607 IKALSESGRESEAREMFSSIER 628
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 96/210 (45%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G PD +++N + + L + +F+ G+ P ++VL+ A S+
Sbjct: 350 GYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEG 409
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ L QM GL + N++++ + + LT M++ ++ T+N ++
Sbjct: 410 DRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSG 469
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
Y G + K+ G+ + L G KPDV+T++ I + K + F+EM++ G P+
Sbjct: 470 YSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPN 529
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
T +L+ +C + T++ + M ++
Sbjct: 530 EITYNILIRSCCSTGDTDRSVKLFAKMKEN 559
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 80/191 (41%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ G P+ ++N + Y G + V E + G P + + ++++ +
Sbjct: 451 MQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKE 510
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ D +M + G++ + N ++ G + ++ M+ D+ YN
Sbjct: 511 IKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNA 570
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
I + + + K E L + + GLKPD T+++ I A S+ E+F + G
Sbjct: 571 TIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHG 630
Query: 181 CYPDGGTAKVL 191
C PD T +++
Sbjct: 631 CVPDSYTKRLV 641
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 74/152 (48%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D++ ++L +A R G L + + ++++ G + + VL+ ++ + G C D+
Sbjct: 109 DQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVF 168
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
Q+ G+K T + N++++ + M + C+ D TYNILI+ +
Sbjct: 169 AQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKK 228
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAY 160
G +D+ L + + +G +P+V T+T I +
Sbjct: 229 GVVDEAIRLVKQMEQEGNRPNVFTYTILIDGF 260
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 64/138 (46%)
Query: 15 ILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKS 74
+L+ ++GR G VF + +G+ P+ + + ++ A K+ ++ QM
Sbjct: 150 VLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSD 209
Query: 75 GLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKM 134
G K D F N +++ + G + ++ ME ++ TY ILI+ + AG +D+
Sbjct: 210 GCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEA 269
Query: 135 EGLFQLLHSKGLKPDVVT 152
+++ + L P+ T
Sbjct: 270 LKQLEMMRVRKLNPNEAT 287
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 88/215 (40%), Gaps = 2/215 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ GC+PDR +YNIL+ + G +++A + + M++ G P + ++ +L+ F G
Sbjct: 206 MRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGR 265
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLT-VMENGSCEADISTYN 119
V + L M L + + + ++ R K EVL ME S + Y+
Sbjct: 266 VDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVG-YD 324
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
++ + + + +G PD T+ + + K V IF+ +
Sbjct: 325 AVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSR 384
Query: 180 GCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
G P VL+ A N + + ++ M D
Sbjct: 385 GVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVD 419
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 4/221 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ M +P+ YN L++A GRAG A ++F +M G+TP K+ L+ + K
Sbjct: 317 MKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARW 376
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVM-ENGSCEADISTYN 119
+ +M +D + N++LN+ +G + E + M E+ C D +Y
Sbjct: 377 ARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYT 436
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
++N YG G +K LF+ + G++ +V+ T + K K + +F+ I
Sbjct: 437 AMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKR 496
Query: 180 GCYPDG---GTAKVLLAACSNEDQTEQVTTVIRTMDKDIKT 217
G PD G ++A C + + E+V + +K + T
Sbjct: 497 GVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKKLVT 537
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 93/212 (43%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G E D +Y+ ++ R N A FE M + G+ P ++ +L +SK+G V +
Sbjct: 216 GVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEV 275
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ + +G K D + + ++G G + + VL M++ + ++ YN L+
Sbjct: 276 LSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEA 335
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
G+AG LF + GL P+ T T+ + Y K + L+++EEM D
Sbjct: 336 MGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMD 395
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTMDKDIK 216
LL C++ E+ + M + ++
Sbjct: 396 FILYNTLLNMCADIGLEEEAERLFNDMKESVQ 427
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 88/216 (40%), Gaps = 36/216 (16%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFE-------------------------- 34
M G PD +Y+ ++D Y ++G + + +++E
Sbjct: 247 MYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGD 306
Query: 35 ---------DMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNS 85
+MK + + P + + LL A + G + N+M ++GL + L +
Sbjct: 307 YDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTA 366
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQ-LLHSK 144
++ +YG+ ++ M+ D YN L+N G ++ E LF + S
Sbjct: 367 LVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESV 426
Query: 145 GLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+PD ++T+ + Y + +E+FEEM+ +G
Sbjct: 427 QCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAG 462
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 73 KSGLKLDTFVLN-SMLNL-YGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGF 130
KS ++T N +M +L +GR QF +EE+ M E D TY+ +I +
Sbjct: 179 KSLFPMETIFYNVTMKSLRFGR--QFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNL 236
Query: 131 IDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKV 190
+K F+ ++ GL PD VT+++ + YSK L ++E + +G PD V
Sbjct: 237 YNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSV 296
Query: 191 L 191
L
Sbjct: 297 L 297
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 95/190 (50%), Gaps = 8/190 (4%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
E S+N ++ Y + GF DA +F DM R+G+ P + ++++SA S + S
Sbjct: 226 EKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRS 285
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
++ + + ++L+ FV ++L+++ + + E G+ + ++ T+N +I+ Y
Sbjct: 286 LVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFN--ELGT-QRNLVTWNAMISGYT 342
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG-CYPDG 185
+ G + LF + K +VV+W S I Y+ +E FE+MID G PD
Sbjct: 343 RIGDMSSARQLFDTMP----KRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDE 398
Query: 186 GTAKVLLAAC 195
T +L+AC
Sbjct: 399 VTMISVLSAC 408
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 7/172 (4%)
Query: 8 PDR--ASYNILVDAYGRAGFLNDAEAVFEDMKRVGIT-PTMKSHMVLLSAFSKTGNVSKC 64
P R S+N L+ Y G A FEDM G + P + + +LSA ++
Sbjct: 358 PKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELG 417
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ I++ + K+ +KL+ S++ +Y R G + + V M+ E D+ +YN L
Sbjct: 418 DCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK----ERDVVSYNTLFTA 473
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
+ G + L + +G++PD VT+TS + A ++ L IF+ +
Sbjct: 474 FAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSI 525
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 85/197 (43%), Gaps = 9/197 (4%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
+G + + ++N ++ Y R G ++ A +F+ M + + S L++ ++ G
Sbjct: 322 FNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVV----SWNSLIAGYAHNGQ 377
Query: 61 VSKCEDILNQMCKSG-LKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
+ + M G K D + S+L+ G + + ++ + + + S Y
Sbjct: 378 AALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYR 437
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
LI Y + G + + + +F + + DVV++ + A++ V L + +M D
Sbjct: 438 SLIFMYARGGNLWEAKRVFDEMKER----DVVSYNTLFTAFAANGDGVETLNLLSKMKDE 493
Query: 180 GCYPDGGTAKVLLAACS 196
G PD T +L AC+
Sbjct: 494 GIEPDRVTYTSVLTACN 510
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 2/212 (0%)
Query: 4 MGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSK 63
+G PD +YN L+ Y R +++A AV M+ GI P + ++ L+S +K +++
Sbjct: 42 LGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNR 101
Query: 64 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTV-MENGSCEADISTYNILI 122
+ ++M SGL D + N++++ Y +LG+ G+ ++L + I TYNIL+
Sbjct: 102 VLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILL 161
Query: 123 NRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCY 182
+ ++G D LF+ L S+ +KP+++T+ I K + + E+ SG
Sbjct: 162 DALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYT 220
Query: 183 PDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
P+ T +L + E+ + M K+
Sbjct: 221 PNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKE 252
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 103/206 (50%), Gaps = 6/206 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G EPD +YN L+ + LN +F++M G++P M S+ L+S + K G
Sbjct: 74 MREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGR 133
Query: 61 VSKCEDILNQ-MCKSGL--KLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADIST 117
+ IL++ + +GL +DT+ N +L+ + G E+ +++ + ++ T
Sbjct: 134 HGEAFKILHEDIHLAGLVPGIDTY--NILLDALCKSGHTDNAIELFKHLKS-RVKPELMT 190
Query: 118 YNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
YNILIN ++ + ++ + + L G P+ VT+T+ + Y K K + L++F +M
Sbjct: 191 YNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMK 250
Query: 178 DSGCYPDGGTAKVLLAACSNEDQTEQ 203
G DG +++A + E+
Sbjct: 251 KEGYTFDGFANCAVVSALIKTGRAEE 276
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 80/177 (45%), Gaps = 1/177 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
++ G P+ +Y ++ Y + + +F MK+ G T ++ ++SA KTG
Sbjct: 214 LKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGR 273
Query: 61 VSKCEDILNQMCKSGLK-LDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
+ + ++++ +SG + D N++LNLY + G ++++L +E + D T+
Sbjct: 274 AEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHT 333
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
I++N G E + G++P VVT I K R + +F M
Sbjct: 334 IIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASM 390
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 84/183 (45%), Gaps = 5/183 (2%)
Query: 36 MKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQ 95
MK GI+ + + + +++ K N+ + E +L + G+ D N+++ Y R
Sbjct: 6 MKFPGISTKLLN--ISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIG 63
Query: 96 FGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLF-QLLHSKGLKPDVVTWT 154
+ V M E D++TYN LI+ + ++++ LF ++LHS GL PD+ ++
Sbjct: 64 IDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHS-GLSPDMWSYN 122
Query: 155 SRIGAYSKKKLYVRCLEIFEEMID-SGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
+ + Y K + +I E I +G P T +LL A T+ + + +
Sbjct: 123 TLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKS 182
Query: 214 DIK 216
+K
Sbjct: 183 RVK 185
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 93/201 (46%), Gaps = 2/201 (0%)
Query: 14 NILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCK 73
NI V++ + L AE + D R+G+ P + ++ L+ +++ + + + +M +
Sbjct: 17 NISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMRE 76
Query: 74 SGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAG-FID 132
+G++ D NS+++ + ++ ++ M + D+ +YN L++ Y + G +
Sbjct: 77 AGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGE 136
Query: 133 KMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLL 192
+ L + +H GL P + T+ + A K +E+F+ + S P+ T +L+
Sbjct: 137 AFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPELMTYNILI 195
Query: 193 AACSNEDQTEQVTTVIRTMDK 213
+ V ++R + K
Sbjct: 196 NGLCKSRRVGSVDWMMRELKK 216
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 1/154 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G EPD SY IL++ RAG + DA ++ M R G++P K+ L+
Sbjct: 140 MVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARK 199
Query: 61 VSKCEDILNQMCKSG-LKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
V +++ + KS +KL T V N++++ + + G+ K E + + M CE D+ TYN
Sbjct: 200 VDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYN 259
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTW 153
+L+N Y + + EG+ + G++ D ++
Sbjct: 260 VLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSY 293
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 91/174 (52%), Gaps = 4/174 (2%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 72
YN L+ + +AG + AEA+ M ++G P + ++ VLL+ + + + E ++ +M
Sbjct: 223 YNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMV 282
Query: 73 KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLT--VMENGSCEADISTYNILINRYGQAGF 130
+SG++LD + N +L + R+ K + + G C D+ +Y+ LI + +A
Sbjct: 283 RSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC--DVVSYSTLIETFCRASN 340
Query: 131 IDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
K LF+ + KG+ +VVT+TS I A+ ++ ++ ++M + G PD
Sbjct: 341 TRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPD 394
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 1/189 (0%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D SY+ L++ + RA A +FE+M++ G+ + ++ L+ AF + GN S + +L
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
+QM + GL D ++L+ + G K V M D +YN LI+ ++
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRS 443
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTA 188
G + + LF+ + K PD +T+ IG + K +++++M+D G D +
Sbjct: 444 GRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVS 503
Query: 189 KVLL-AACS 196
L+ A+CS
Sbjct: 504 DTLIKASCS 512
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 35/227 (15%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGI-------TPTMKSH----- 48
M +GCEPD +YN+L++ Y L AE V +M R GI +K H
Sbjct: 246 MSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSH 305
Query: 49 -------MV----------------LLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNS 85
MV L+ F + N K + +M + G+ ++ S
Sbjct: 306 PDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTS 365
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
++ + R G +++L M D Y +++ ++G +DK G+F +
Sbjct: 366 LIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHE 425
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLL 192
+ PD +++ S I + +++FE+M C PD T K ++
Sbjct: 426 ITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFII 472
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 60/149 (40%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+H YN + R AEA++ DMK +G + ++ +S K
Sbjct: 35 MRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKK 94
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ +L+ M G D + N L+L R + G + M E D+ +Y I
Sbjct: 95 FDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTI 154
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPD 149
LIN +AG + ++ + G+ PD
Sbjct: 155 LINGLFRAGKVTDAVEIWNAMIRSGVSPD 183
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 80/186 (43%), Gaps = 6/186 (3%)
Query: 10 RASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILN 69
R +Y + ++G +++A VF++M+ + + + E I
Sbjct: 9 RLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYW 68
Query: 70 QMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI---LINRYG 126
M G L F + ++ ++ +F ++ +L+ ME DI +N+ L+ R
Sbjct: 69 DMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCREN 128
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGG 186
+ GF ++ F ++ +G +PDVV++T I + +EI+ MI SG PD
Sbjct: 129 KVGF--AVQTFFCMVQ-RGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNK 185
Query: 187 TAKVLL 192
L+
Sbjct: 186 ACAALV 191
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 92/193 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M++ G + D +Y L+D + + + A A+F ++ G+ P+ + L+S F GN
Sbjct: 645 MKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGN 704
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ D+ +M K GL+ D ++++ + G E+ T M+ D Y +
Sbjct: 705 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTV 764
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
++N + G K+ +F+ + + P+V+ + + I + ++ + +EM+D G
Sbjct: 765 IVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKG 824
Query: 181 CYPDGGTAKVLLA 193
PDG T +L++
Sbjct: 825 ILPDGATFDILVS 837
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 93/186 (50%), Gaps = 3/186 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G P+ SYN ++ + R ++ A VF ++ G+ P ++ +L+ + +
Sbjct: 469 MESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHD 528
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVM--ENGSCEADISTY 118
+++N M S ++++ V +++N ++GQ K E+L M E C + +S Y
Sbjct: 529 EQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMS-Y 587
Query: 119 NILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID 178
N +I+ + + G +D ++ + G+ P+V+T+TS + K + LE+ +EM +
Sbjct: 588 NSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKN 647
Query: 179 SGCYPD 184
G D
Sbjct: 648 KGVKLD 653
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 85/180 (47%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G P+ +Y L++ + ++ A + ++MK G+ + ++ L+ F K N+
Sbjct: 614 GISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESA 673
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ +++ + GL + NS+++ + LG ++ M D+ TY LI+
Sbjct: 674 SALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDG 733
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ G + L+ + + GL PD + +T + SKK +V+ +++FEEM + P+
Sbjct: 734 LLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPN 793
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 93/203 (45%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM 71
SYN ++D + + G ++ A A +E+M GI+P + ++ L++ K + + ++ ++M
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 72 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
G+KLD ++++ + + + + + YN LI+ + G +
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNM 705
Query: 132 DKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVL 191
L++ + GL+ D+ T+T+ I K + E++ EM G PD V+
Sbjct: 706 VAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVI 765
Query: 192 LAACSNEDQTEQVTTVIRTMDKD 214
+ S + Q +V + M K+
Sbjct: 766 VNGLSKKGQFVKVVKMFEEMKKN 788
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 100/211 (47%), Gaps = 1/211 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G P+ ++++L++ + + G + A ++ M+ +G+TP++ ++ + K
Sbjct: 365 MEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQK 424
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + ++ ++GL + FV N++L+ + G+ + E+L+ ME+ ++ +YN
Sbjct: 425 HEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNN 483
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
++ + + +D +F + KGLKP+ T++ I + LE+ M S
Sbjct: 484 VMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSN 543
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+G + ++ QT + ++ M
Sbjct: 544 IEVNGVVYQTIINGLCKVGQTSKARELLANM 574
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/209 (19%), Positives = 95/209 (45%), Gaps = 2/209 (0%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGI-TPTMKSHMVLLSAFSKTGNVSK 63
G EPD Y++ V A + L A ++ +MK + P+ +++ ++ A K GN+
Sbjct: 263 GAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDD 322
Query: 64 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN 123
+ ++M G+ ++ S++ + + + ME + T+++LI
Sbjct: 323 AIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIE 382
Query: 124 RYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYP 183
+ + G ++K ++ + GL P V + I + K + + L++F+E ++G
Sbjct: 383 WFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-A 441
Query: 184 DGGTAKVLLAACSNEDQTEQVTTVIRTMD 212
+ +L+ + +T++ T ++ M+
Sbjct: 442 NVFVCNTILSWLCKQGKTDEATELLSKME 470
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 105/241 (43%), Gaps = 36/241 (14%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDM------------------------------ 36
+PD +YNIL+ ++G +DA +F++M
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 37 ------KRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLY 90
K G+ PT+ + L+ A + G +S + ++ + +K+D + +++++
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSL 268
Query: 91 GRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDV 150
+ G+ ++ +L M C+ D TYN+LIN + + + + KGLKPDV
Sbjct: 269 IKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDV 328
Query: 151 VTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRT 210
+++ +G + + K + +FE+M GC PD + +++ Q E+ ++
Sbjct: 329 ISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDE 388
Query: 211 M 211
M
Sbjct: 389 M 389
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 96/206 (46%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D +YNIL++ Y + G A A+ ++M GI PT ++ L+ + + +++
Sbjct: 396 DSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELF 455
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
++ G+K D ++N++++ + +G + +L M+ S D TYN L+
Sbjct: 456 EKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGE 515
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTA 188
G ++ L + +G+KPD +++ + I YSKK + +EM+ G P T
Sbjct: 516 GKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTY 575
Query: 189 KVLLAACSNEDQTEQVTTVIRTMDKD 214
LL S + E ++R M +
Sbjct: 576 NALLKGLSKNQEGELAEELLREMKSE 601
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 3/190 (1%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 72
+++LV + +++A F MK G P ++ +L+ S+ + M
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 73 KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFID 132
+ +K + + N M+N+ + G+ K + L +ME + I TYN L+ + G I+
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277
Query: 133 KMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLL 192
+ + SKG +PD+ T+ + + R E+ EM + G PD + +L+
Sbjct: 278 GARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILI 334
Query: 193 AACSNEDQTE 202
CSN E
Sbjct: 335 RGCSNNGDLE 344
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ +G PD SYNIL+ G L A A ++M + G+ PT ++ L+
Sbjct: 318 MKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENK 377
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ E ++ ++ + G+ LD+ N ++N Y + G K + M + TY
Sbjct: 378 IEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTS 437
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI + + + LF+ + KG+KPD+V + + + R + +EM
Sbjct: 438 LIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMS 497
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
PD T L+ E + E+ ++ M +
Sbjct: 498 INPDDVTYNCLMRGLCGEGKFEEARELMGEMKR 530
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 7/194 (3%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M M + + ++NI+++ + G L A+ M+ GI PT+ ++ L+ FS G
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ I+++M G + D N +L+ + G+ EVL M+ D +YNI
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPILSW---MCNEGRASEVLREMKEIGLVPDSVSYNI 332
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRI-GAYSKKKLYVRCLEIF-EEMID 178
LI G ++ + +G+ P T+ + I G + + K + EI E+ +
Sbjct: 333 LIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENK--IEAAEILIREIRE 390
Query: 179 SGCYPDGGTAKVLL 192
G D T +L+
Sbjct: 391 KGIVLDSVTYNILI 404
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 59/134 (44%)
Query: 71 MCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGF 130
M + G T N +L L RL + M ++++ T+NI+IN + G
Sbjct: 181 MKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 240
Query: 131 IDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKV 190
+ K +G ++ G+KP +VT+ + + +S + I EM G PD T
Sbjct: 241 LKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNP 300
Query: 191 LLAACSNEDQTEQV 204
+L+ NE + +V
Sbjct: 301 ILSWMCNEGRASEV 314
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G +PD SYN L+ Y + G A V ++M +G PT+ ++ LL SK
Sbjct: 528 MKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQE 587
Query: 61 VSKCEDILNQMCKSGL 76
E++L +M G+
Sbjct: 588 GELAEELLREMKSEGI 603
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 102/228 (44%), Gaps = 37/228 (16%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G D Y ++ ++ + G LN AE V+++M I P + + VL++AF+ TGN
Sbjct: 566 MRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGN 625
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVME---NGSCEADIST 117
V + + M ++G+ ++ + NS++ LY ++G + E + + N + D+ T
Sbjct: 626 VQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYT 685
Query: 118 YNILINRYGQAGFIDKMEGLFQLLHSKG-------------------------------- 145
N +IN Y + + K E +F + +G
Sbjct: 686 SNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMRE 745
Query: 146 --LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVL 191
+ D +++ S +G ++ + +E F+EM+ SG PD T K L
Sbjct: 746 MKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSL 793
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 94/222 (42%), Gaps = 11/222 (4%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G +P ++Y L+D Y + G A M ++G+ P + ++L + K
Sbjct: 213 MIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKARE 272
Query: 61 VSKCEDILNQM------CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEAD 114
K E+ + S + L ++ N+M++ YG+ GQ + E M
Sbjct: 273 FQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPT 332
Query: 115 ISTYNILINRYGQAGFIDKMEGLFQL--LHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEI 172
T+N +I+ YG G + ++ L + LH PD T+ I ++K R
Sbjct: 333 TVTFNTMIHIYGNNGQLGEVTSLMKTMKLHC---APDTRTYNILISLHTKNNDIERAGAY 389
Query: 173 FEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
F+EM D G PD + + LL A S E+ +I MD D
Sbjct: 390 FKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDD 431
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 4/214 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G PD+ +YN LV A + E M+ G + ++S+F K G
Sbjct: 531 MMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQ 590
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
++ E++ +M + ++ D V ++N + G + + M+ + YN
Sbjct: 591 LNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNS 650
Query: 121 LINRYGQAGFIDKMEGLF-QLLHS--KGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
LI Y + G++D+ E ++ +LL S K PDV T I YS++ + + IF+ M
Sbjct: 651 LIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMK 710
Query: 178 DSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
G + T ++L + E+ T + + M
Sbjct: 711 QRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQM 743
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 6/198 (3%)
Query: 4 MGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSK 63
+ C PD +YNIL+ + + + A A F++MK G+ P S+ LL AFS V +
Sbjct: 361 LHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEE 420
Query: 64 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADIST--YNIL 121
E ++ +M +++D + +++ +Y + +E+ + + ++S+ Y+
Sbjct: 421 AEGLIAEMDDDNVEIDEYTQSALTRMY---VEAEMLEKSWSWFKRFHVAGNMSSEGYSAN 477
Query: 122 INRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGC 181
I+ YG+ G++ + E +F K V+ + I AY K + E+FE M+ G
Sbjct: 478 IDAYGERGYLSEAERVFICCQEVN-KRTVIEYNVMIKAYGISKSCEKACELFESMMSYGV 536
Query: 182 YPDGGTAKVLLAACSNED 199
PD T L+ ++ D
Sbjct: 537 TPDKCTYNTLVQILASAD 554
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 36/180 (20%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM 71
+YN ++D YG++G + +A F+ M GI PT
Sbjct: 300 TYNTMIDTYGKSGQIKEASETFKRMLEEGIVPT--------------------------- 332
Query: 72 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
T N+M+++YG GQ G++ ++ M+ C D TYNILI+ + + I
Sbjct: 333 --------TVTFNTMIHIYGNNGQLGEVTSLMKTMKL-HCAPDTRTYNILISLHTKNNDI 383
Query: 132 DKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVL 191
++ F+ + GLKPD V++ + + A+S + + + EM D D T L
Sbjct: 384 ERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSAL 443
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 5/205 (2%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 72
YN+++ AYG + A +FE M G+TP ++ L+ + K L +M
Sbjct: 508 YNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMR 567
Query: 73 KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFID 132
++G D ++++ + +LGQ EEV M + E D+ Y +LIN + G +
Sbjct: 568 ETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQ 627
Query: 133 KMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGC----YPDGGTA 188
+ + + G+ + V + S I Y+K I+ +++ S C YPD T+
Sbjct: 628 QAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQS-CNKTQYPDVYTS 686
Query: 189 KVLLAACSNEDQTEQVTTVIRTMDK 213
++ S + + +M +
Sbjct: 687 NCMINLYSERSMVRKAEAIFDSMKQ 711
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 1/152 (0%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
PD + N +++ Y + AEA+F+ MK+ G M +L + K G + I
Sbjct: 681 PDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAM-MLCMYKKNGRFEEATQI 739
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
QM + + D NS+L L+ G+F + E M + + D ST+ L +
Sbjct: 740 AKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMK 799
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGA 159
G K + + K +K + W S + +
Sbjct: 800 LGMSKKAVRKIEEIRKKEIKRGLELWISTLSS 831
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 94/194 (48%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G P+ ++ L++ + + G ++ A +F+ M++ GI P + ++ L+ + K G +
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ +Q G+KLD V +S +++Y + G V M ++ TY ILI
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
Q G I + G++ + +G++P +VT++S I + K ++E+MI G PD
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 185 GGTAKVLLAACSNE 198
VL+ S +
Sbjct: 461 VVIYGVLVDGLSKQ 474
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 100/237 (42%), Gaps = 42/237 (17%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G EP +Y+ L+D + + G L A++EDM ++G P + + VL+ SK G +
Sbjct: 421 GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA 480
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEV---------------------L 103
+M ++L+ V NS+++ + RL +F + +V +
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV 540
Query: 104 TVMENGSCE--------------------ADISTYNILINRYGQAGFIDKMEGLFQLLHS 143
++ME+ C+ ADI+ N++I+ + I+ F L
Sbjct: 541 SIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE 600
Query: 144 KGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAA-CSNED 199
++PD+VT+ + I Y + IFE + + P+ T +L+ C N D
Sbjct: 601 GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 657
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 8/182 (4%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
EPD +YN ++ Y L++AE +FE +K P + +L+ K ++
Sbjct: 604 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 663
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRL----GQFGKMEEVLTVMENGSCEADISTYNILI 122
+ + M + G K + +++ + + G F EE M+ I +Y+I+I
Sbjct: 664 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE----MQEKGISPSIVSYSIII 719
Query: 123 NRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCY 182
+ + G +D+ +F L PDVV + I Y K V ++E M+ +G
Sbjct: 720 DGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 779
Query: 183 PD 184
PD
Sbjct: 780 PD 781
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 98/224 (43%), Gaps = 11/224 (4%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G P+ +Y IL+ + G + +A ++ + + G+ P++ ++ L+ F K GN+
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ M K G D + +++ + G M S ++ +N LI+
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTS--RIG----AYSKKKLYVRCLEIFEEMID 178
+ + D+ +F+L+ G+KPDV T+T+ R+ A+ K L++F+ M
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQR 565
Query: 179 SGCYPDGGTAKV---LLAACSN-EDQTEQVTTVIR-TMDKDIKT 217
+ D V LL C ED ++ +I M+ DI T
Sbjct: 566 NKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT 609
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/197 (19%), Positives = 85/197 (43%)
Query: 3 HMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVS 62
H G + D ++ +D Y ++G L A V++ M GI+P + ++ +L+ + G +
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408
Query: 63 KCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILI 122
+ + Q+ K G++ +S+++ + + G + M D+ Y +L+
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 123 NRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCY 182
+ + G + + + ++ +VV + S I + + + L++F M G
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Query: 183 PDGGTAKVLLAACSNED 199
PD T ++ ED
Sbjct: 529 PDVATFTTVMRVSIMED 545
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 90/211 (42%), Gaps = 6/211 (2%)
Query: 5 GCEPDRASY------NILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKT 58
G +PD A++ +I+ DA+ + +F+ M+R I+ + V++ K
Sbjct: 526 GIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 585
Query: 59 GNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTY 118
+ N + + ++ D N+M+ Y L + + E + +++ + T
Sbjct: 586 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTL 645
Query: 119 NILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID 178
ILI+ + +D +F ++ KG KP+ VT+ + +SK ++FEEM +
Sbjct: 646 TILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE 705
Query: 179 SGCYPDGGTAKVLLAACSNEDQTEQVTTVIR 209
G P + +++ + ++ T +
Sbjct: 706 KGISPSIVSYSIIIDGLCKRGRVDEATNIFH 736
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 94/194 (48%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G P+ ++ L++ + + G ++ A +F+ M++ GI P + ++ L+ + K G +
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ +Q G+KLD V +S +++Y + G V M ++ TY ILI
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
Q G I + G++ + +G++P +VT++S I + K ++E+MI G PD
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 185 GGTAKVLLAACSNE 198
VL+ S +
Sbjct: 461 VVIYGVLVDGLSKQ 474
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 5/218 (2%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G EP +Y+ L+D + + G L A++EDM ++G P + + VL+ SK G +
Sbjct: 421 GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA 480
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+M ++L+ V NS+++ + RL +F + +V +M + D++T+ ++
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV 540
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
G +++ LF + GL+PD + + + I A+ K L++F+ M + D
Sbjct: 541 SIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISAD 600
Query: 185 GGTAKV---LLAACSN-EDQTEQVTTVIR-TMDKDIKT 217
V LL C ED ++ +I M+ DI T
Sbjct: 601 IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT 638
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 8/182 (4%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
EPD +YN ++ Y L++AE +FE +K P + +L+ K ++
Sbjct: 633 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 692
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRL----GQFGKMEEVLTVMENGSCEADISTYNILI 122
+ + M + G K + +++ + + G F EE M+ I +Y+I+I
Sbjct: 693 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE----MQEKGISPSIVSYSIII 748
Query: 123 NRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCY 182
+ + G +D+ +F L PDVV + I Y K V ++E M+ +G
Sbjct: 749 DGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 808
Query: 183 PD 184
PD
Sbjct: 809 PD 810
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 90/209 (43%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M MG EPD +Y L+DA+ + +F+ M+R I+ + V++ K
Sbjct: 557 MFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHR 616
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ N + + ++ D N+M+ Y L + + E + +++ + T I
Sbjct: 617 IEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTI 676
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ + +D +F ++ KG KP+ VT+ + +SK ++FEEM + G
Sbjct: 677 LIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG 736
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIR 209
P + +++ + ++ T +
Sbjct: 737 ISPSIVSYSIIIDGLCKRGRVDEATNIFH 765
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 83/188 (44%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G +PD A++ ++ G L +A +F M ++G+ P ++ L+ AF K +
Sbjct: 526 GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIG 585
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ + M ++ + D V N +++L + + + + G E DI TYN +I
Sbjct: 586 LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 645
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
Y +D+ E +F+LL P+ VT T I K + +F M + G P+
Sbjct: 646 YCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPN 705
Query: 185 GGTAKVLL 192
T L+
Sbjct: 706 AVTYGCLM 713
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 79/181 (43%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G P+ +Y IL+ + G + +A ++ + + G+ P++ ++ L+ F K GN+
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ M K G D + +++ + G M S ++ +N LI+
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ + D+ +F+L+ G+KPDV T+T+ + + L +F M G PD
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPD 565
Query: 185 G 185
Sbjct: 566 A 566
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/211 (18%), Positives = 90/211 (42%)
Query: 3 HMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVS 62
H G + D ++ +D Y ++G L A V++ M GI+P + ++ +L+ + G +
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408
Query: 63 KCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILI 122
+ + Q+ K G++ +S+++ + + G + M D+ Y +L+
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 123 NRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCY 182
+ + G + + + ++ +VV + S I + + + L++F M G
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Query: 183 PDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
PD T ++ E + E+ + M K
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEALFLFFRMFK 559
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 109/210 (51%), Gaps = 14/210 (6%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ + D A YNI++ +AG ++A +F ++ G+ P ++++ +++ FS G
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLG- 62
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ E + +M + GL DT NSM++ + + + +V + SC ST+N
Sbjct: 63 --RAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV-----SKSC----STFNT 111
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN Y +A + LF ++ +G+ +V+T+T+ I + + + L+IF+EM+ +G
Sbjct: 112 LINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNG 171
Query: 181 CYPDGGTAK-VLLAACSNEDQTEQVTTVIR 209
Y T + +L CS ++ + V +++
Sbjct: 172 VYSSSITFRDILPQLCSRKELRKAVAMLLQ 201
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 94/190 (49%), Gaps = 6/190 (3%)
Query: 26 LNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNS 85
+ DAE+V DM++ GI P + + ++ K N+ K D+ N+M K +++ +++S
Sbjct: 307 IEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSS 366
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
+L Y ++G F + ++ + D YN+ + G+ G +++ LF+ + KG
Sbjct: 367 ILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKG 426
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID---SGCYPDGGTAKVLLAACSNEDQTE 202
+ PDV+ +T+ IG L +C + F+ MI+ +G PD VL + +
Sbjct: 427 IAPDVINYTTLIGGCC---LQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQ 483
Query: 203 QVTTVIRTMD 212
+ ++ M+
Sbjct: 484 EAFETLKMME 493
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 87/183 (47%), Gaps = 7/183 (3%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ PD Y I+++ Y L A+F+DMKR I P + ++ VLL N
Sbjct: 689 MEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN-KPERN 747
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+S+ +M +K D F +++ ++G G+ + + M + D + Y
Sbjct: 748 LSR------EMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTA 801
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI + G++ + + +F + G+KPDVV +T+ I + ++ +++ +EM++ G
Sbjct: 802 LIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKG 861
Query: 181 CYP 183
P
Sbjct: 862 IKP 864
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 92/223 (41%), Gaps = 35/223 (15%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M +G EP+++ Y L+ A+ R + A FE + I P + ++ ++++ + +
Sbjct: 591 MWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNE 650
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + M + +K D + +LN L +ME + D+ Y I
Sbjct: 651 PKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVI-------PDVVYYTI 703
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKL--------------Y 166
+INRY + K+ LF+ + + + PDVVT+T + ++ L Y
Sbjct: 704 MINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFY 763
Query: 167 VRCL--------------EIFEEMIDSGCYPDGGTAKVLLAAC 195
L IF++MI+SG PD L+A C
Sbjct: 764 YTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACC 806
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 96/240 (40%), Gaps = 40/240 (16%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLS------------AF 55
PD +Y I+++ Y R A A+FEDMKR + P + ++ VLL+ AF
Sbjct: 633 PDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAF 692
Query: 56 SKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTV---------- 105
+V ++N+ C LN + +Y + E V V
Sbjct: 693 DVIPDVVYYTIMINRYCH---------LNDLKKVYALFKDMKRREIVPDVVTYTVLLKNK 743
Query: 106 --------MENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRI 157
M+ + D+ Y +LI+ + G + + + +F + G+ PD +T+ I
Sbjct: 744 PERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALI 803
Query: 158 GAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM-DKDIK 216
K IF+ MI+SG PD L+A C + +++ M +K IK
Sbjct: 804 ACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIK 863
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
DR YN+ DA G+ G + +A +F +M GI P + ++ L+ G S D++
Sbjct: 395 DRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLM 454
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
+M +G D + N + G + E L +MEN + T+N++I A
Sbjct: 455 IEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDA 514
Query: 129 GFIDKMEGLFQLLHSKGLKPD 149
G +DK E ++ L K + D
Sbjct: 515 GELDKAEAFYESLEHKSREND 535
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 82/183 (44%), Gaps = 29/183 (15%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMK----------------------- 37
M++ G +P ++N++++ AG L+ AEA +E ++
Sbjct: 492 MENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHA 551
Query: 38 -----RVGITPTMKSHMVLLSAF-SKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYG 91
R+ + L ++ ++ +SK +D+L++M K G++ + + ++ +
Sbjct: 552 FERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWC 611
Query: 92 RLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVV 151
R+ K E ++ D+ TY I+IN Y + + LF+ + + +KPDVV
Sbjct: 612 RVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVV 671
Query: 152 TWT 154
T++
Sbjct: 672 TYS 674
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G PD +YNIL+ R G ++ + +F++M R G +P ++ +LL K
Sbjct: 249 GFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAA 308
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
LN M + G+ ++++ R G + L M C D+ Y ++I
Sbjct: 309 LTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITG 368
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
Y +G +DK + +F+ + KG P+V T+ S I + + +EM GC P+
Sbjct: 369 YVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPN 428
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
L++ + + VIR M K
Sbjct: 429 FVVYSTLVSYLRKAGKLSEARKVIREMVK 457
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G PD +YNIL+ G+ A MK VGI P++ + L+ S+ GN
Sbjct: 280 MARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGN 339
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ C+ L++M K+G + D M+ Y G+ K +E+ M ++ TYN
Sbjct: 340 LEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNS 399
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I AG + L + + S+G P+ V +++ + K ++ EM+ G
Sbjct: 400 MIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Query: 181 CY 182
Y
Sbjct: 460 HY 461
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 83/202 (41%), Gaps = 4/202 (1%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM 71
++N+L+ + G AG A F K P S+ +L++ E + QM
Sbjct: 186 TFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQM 245
Query: 72 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
+ G D N +L RLG+ + + + M D TYNIL++ G+
Sbjct: 246 LEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGN-- 303
Query: 132 DKMEGLFQLLHSK--GLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAK 189
+ L L H K G+ P V+ +T+ I S+ C +EM+ +GC PD
Sbjct: 304 KPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYT 363
Query: 190 VLLAACSNEDQTEQVTTVIRTM 211
V++ + ++ + R M
Sbjct: 364 VMITGYVVSGELDKAKEMFREM 385
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 87/189 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ GC P+ Y L+ + ++ + D +F +M + G+ ++ VL+ + G
Sbjct: 319 MERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGR 378
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+++ NQM D N +L+ G+ K + M + +I TY I
Sbjct: 379 PDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTI 438
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I + G ++ LF L SKG+KP+V+T+T+ I + ++ L +F++M + G
Sbjct: 439 IIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDG 498
Query: 181 CYPDGGTAK 189
P+ K
Sbjct: 499 FLPNESVYK 507
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 90/184 (48%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M +G EPD ++ L++ Y + DA A+F+ + +G P + ++ L+ K +
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRH 203
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
++ ++ NQM +G + + N+++ +G++G +L M E ++ T+
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ + + G + + + L+ ++ + PDV T+ S I L ++F M +G
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323
Query: 181 CYPD 184
CYP+
Sbjct: 324 CYPN 327
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 87/189 (46%)
Query: 4 MGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSK 63
MG +P+ +Y L+ + LN A +F M G P + ++ L++ + G
Sbjct: 182 MGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGD 241
Query: 64 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN 123
+L M K ++ + ++++ + ++G+ + +E+ VM S D+ TY LIN
Sbjct: 242 AAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301
Query: 124 RYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYP 183
G +D+ +F L+ G P+ V +T+ I + K K ++IF EM G
Sbjct: 302 GLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA 361
Query: 184 DGGTAKVLL 192
+ T VL+
Sbjct: 362 NTITYTVLI 370
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 88/209 (42%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G P+ +YN LV G DA + DM + I P + + L+ AF K G + +
Sbjct: 218 GSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEA 277
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+++ N M + + D F S++N G + ++ +ME C + Y LI+
Sbjct: 278 KELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHG 337
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ ++ ++ +F + KG+ + +T+T I Y E+F +M PD
Sbjct: 338 FCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPD 397
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
T VLL + E+ + M K
Sbjct: 398 IRTYNVLLDGLCCNGKVEKALMIFEYMRK 426
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 73/188 (38%)
Query: 26 LNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNS 85
NDA +F M P++ LLS +K + QM G+ N
Sbjct: 64 FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
+++ Q + L M E D+ T+ L+N Y I+ LF + G
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVT 205
KP+VVT+T+ I K + +E+F +M +G P+ T L+ +
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 206 TVIRTMDK 213
++R M K
Sbjct: 244 WLLRDMMK 251
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 1/195 (0%)
Query: 4 MGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSK 63
G +P+ +YN LV + G + A +VF M+ +G +P ++++ L++ F+K G++
Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDG 405
Query: 64 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN 123
I N+M SG + V +M+ R +F + E ++ +M +C + T+N I
Sbjct: 406 AVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIK 465
Query: 124 RYGQAGFIDKMEGLF-QLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCY 182
AG +D E +F Q+ P++VT+ + +K + E+ G
Sbjct: 466 GLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE 525
Query: 183 PDGGTAKVLLAACSN 197
T LL N
Sbjct: 526 WSSSTYNTLLHGSCN 540
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 94/209 (44%), Gaps = 1/209 (0%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
EP + YN L++ + A + +M GI+P + S+ L++ +G +
Sbjct: 243 EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFS 302
Query: 67 ILNQMCKSGLKLDTFVLNSMLN-LYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
L QM K G + + L+S++ + R F ++ ++ + ++ YN L+ +
Sbjct: 303 FLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGF 362
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
G I K +F + G P++ T+ S I ++K+ + I+ +M+ SGC P+
Sbjct: 363 CSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNV 422
Query: 186 GTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
++ A + ++ ++I M K+
Sbjct: 423 VVYTNMVEALCRHSKFKEAESLIEIMSKE 451
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 89/215 (41%), Gaps = 1/215 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G P+ SY+ L++ +G + A + M + G P + + L+ G
Sbjct: 272 MVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGT 331
Query: 61 VSKCEDILNQMCKS-GLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
D+ NQM + GL+ + N+++ + G K V + ME C +I TY
Sbjct: 332 TFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYG 391
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
LIN + + G +D ++ + + G P+VV +T+ + A + + + E M
Sbjct: 392 SLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKE 451
Query: 180 GCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
C P T + + + + V R M++
Sbjct: 452 NCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQ 486
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 84/198 (42%), Gaps = 11/198 (5%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
++ GC+P YN ++D + V+ DMKR G P + ++ VLL A K
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V + +L +M G D ++++ +G + E+ E +S YN
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNA 251
Query: 121 LINRYGQAGFIDKMEGLFQLLH---SKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
LIN + +G F+L+ KG+ P+V+++++ I +M+
Sbjct: 252 LINGLCKE---HDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQML 308
Query: 178 DSGCYPDGGTAKVLLAAC 195
GC+P+ T L+ C
Sbjct: 309 KRGCHPNIYTLSSLVKGC 326
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 8/212 (3%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G + + A N + Y + G + +F++M G+ + ++S +S+ G
Sbjct: 186 GLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLI----TWNAVISGYSQNGLAYDV 241
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
++ QM SG+ D F L S+L+ LG EV ++E+ ++ N I+
Sbjct: 242 LELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISM 301
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
Y + G + K +F ++ K L V+WT+ IG Y + L +F++MI G PD
Sbjct: 302 YARCGNLAKARAVFDIMPVKSL----VSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPD 357
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTMDKDIK 216
G ++L+ACS+ T++ + R M ++ K
Sbjct: 358 GAVFVMVLSACSHSGLTDKGLELFRAMKREYK 389
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 93/198 (46%), Gaps = 16/198 (8%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
GCE + L+ Y + G + DA VFE+ + + + L+S ++ V+
Sbjct: 83 GCETEPFVLTALISMYCKCGLVADARKVFEENPQS--SQLSVCYNALISGYTANSKVTDA 140
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNL-----YGRLGQFGKMEEVLTVMENGSCEADISTYN 119
+ +M ++G+ +D+ + ++ L Y LG+ + V G +++++ N
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCV-----KGGLDSEVAVLN 195
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
I Y + G ++ LF + KGL +TW + I YS+ L LE++E+M S
Sbjct: 196 SFITMYMKCGSVEAGRRLFDEMPVKGL----ITWNAVISGYSQNGLAYDVLELYEQMKSS 251
Query: 180 GCYPDGGTAKVLLAACSN 197
G PD T +L++C++
Sbjct: 252 GVCPDPFTLVSVLSSCAH 269
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 102/214 (47%), Gaps = 2/214 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ +G +P+ YN L+D+ GRA A+ +++D+ G TP ++ L+ A+ +
Sbjct: 306 MKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARY 365
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMEN-GSCEADISTYN 119
I +M + GL L + N++L++ + E+ M+N +C+ D T++
Sbjct: 366 GDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFS 425
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
LI Y +G + + E + G +P + TS I Y K K + F+++++
Sbjct: 426 SLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLEL 485
Query: 180 GCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
G PD LL + + +E++ +I ++K
Sbjct: 486 GITPDDRFCGCLLNVMT-QTPSEEIGKLIGCVEK 518
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 14/194 (7%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITP--------TMKS------HMV 50
C+P+ A ++ +G F DA +M P TMK + V
Sbjct: 121 ACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNV 180
Query: 51 LLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGS 110
+ F K+ ++ K E + ++M + G+K D ++++ + G + E M +
Sbjct: 181 TMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFG 240
Query: 111 CEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCL 170
CE D T +I+ YG+AG +D L+ ++ + D VT+++ I Y Y CL
Sbjct: 241 CEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCL 300
Query: 171 EIFEEMIDSGCYPD 184
I+EEM G P+
Sbjct: 301 NIYEEMKALGVKPN 314
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 92/211 (43%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G +PD A++ ++ + G A FE M G P + ++ A+ + GN
Sbjct: 201 MLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGN 260
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V + ++ ++D ++++ +YG G + + M+ + ++ YN
Sbjct: 261 VDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNR 320
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ G+A + + +++ L + G P+ T+ + + AY + + L I+ EM + G
Sbjct: 321 LIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKG 380
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
LL+ C++ ++ + + M
Sbjct: 381 LSLTVILYNTLLSMCADNRYVDEAFEIFQDM 411
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%)
Query: 105 VMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKK 164
++E ++ YN+ + + ++ ++K E LF + +G+KPD T+T+ I +
Sbjct: 165 LLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNG 224
Query: 165 LYVRCLEIFEEMIDSGCYPDGGTAKVLLAA 194
+ R +E FE+M GC PD T ++ A
Sbjct: 225 VPKRAVEWFEKMSSFGCEPDNVTMAAMIDA 254
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 80/163 (49%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC+P +Y +L+ A G ++ A +F++M G P + ++ VL+ + G
Sbjct: 292 MGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGK 351
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + + +M K + N+++N Y + G+ E+LTVME +C+ ++ T+N
Sbjct: 352 IEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNE 411
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKK 163
L+ + G K L + + GL PD+V++ I ++
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCRE 454
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 92/211 (43%)
Query: 2 QHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNV 61
+ + C P+ SY+IL+ G L +A + + M G P+ +++ VL+ A G +
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 62 SKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNIL 121
K ++ ++M G K + +++ R G+ + V M + TYN L
Sbjct: 318 DKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNAL 377
Query: 122 INRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGC 181
IN Y + G + L ++ + KP+V T+ + + + + + + M+D+G
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL 437
Query: 182 YPDGGTAKVLLAACSNEDQTEQVTTVIRTMD 212
PD + VL+ E ++ +M+
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNTAYKLLSSMN 468
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 3/192 (1%)
Query: 24 GFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVL 83
GFL A + M+ G M + +++A K G E ++++ K G LD+ +
Sbjct: 176 GFL--AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIG 233
Query: 84 NSMLNLYGRLGQFGKMEEVLTVM-ENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLH 142
S+L + R +V VM + +C + +Y+ILI+ + G +++ GL +
Sbjct: 234 TSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 293
Query: 143 SKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTE 202
KG +P T+T I A + L + +F+EMI GC P+ T VL+ + + E
Sbjct: 294 EKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIE 353
Query: 203 QVTTVIRTMDKD 214
+ V R M KD
Sbjct: 354 EANGVCRKMVKD 365
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 85/207 (41%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G PD SYN+L+D R G +N A + M I P + +++AF K G
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVA 495
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
L M + G+ LD ++++ ++G+ +L + + N++++
Sbjct: 496 SAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDM 555
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ + + + ++ GL P VVT+T+ + + I E M SGC P+
Sbjct: 556 LSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPN 615
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTM 211
+++ + E+ ++ M
Sbjct: 616 VYPYTIIINGLCQFGRVEEAEKLLSAM 642
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G D + L+D + G DA + E + ++ I T S V+L SK
Sbjct: 502 MLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCK 561
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V + +L ++ K GL ++++ R G +L +M+ C ++ Y I
Sbjct: 562 VKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTI 621
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+IN Q G +++ E L + G+ P+ VT+T + Y R LE M++ G
Sbjct: 622 IINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P +YN L++ Y + G + A + M++ P +++ L+ + G K +
Sbjct: 369 PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL 428
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
L +M +GL D N +++ R G ++L+ M E D T+ +IN + +
Sbjct: 429 LKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCK 488
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSK 162
G D L+ KG+ D VT T+ I K
Sbjct: 489 QGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCK 523
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 104/233 (44%), Gaps = 33/233 (14%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ GC P+ Y I+++ + G + +AE + M+ G++P ++ V++ + G
Sbjct: 607 MKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGK 666
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGK--------------------ME 100
+ + + + M + G +L+ + +S+L + L Q G +
Sbjct: 667 LDRALETVRAMVERGYELNDRIYSSLLQGF-VLSQKGIDNSEESTVSDIALRETDPECIN 725
Query: 101 EVLTVMEN-GSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGL----KPDVVTWTS 155
E+++V+E G C + + + L+ R + G D+ L Q + +G+ D++
Sbjct: 726 ELISVVEQLGGCISGLCIF--LVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDII---- 779
Query: 156 RIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVI 208
+ +Y KK + +C+E+ ++ SG P + +++ E E+ ++
Sbjct: 780 -MESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELV 831
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 85/206 (41%), Gaps = 9/206 (4%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHM--VLLSAFSKTGNVSKCEDILNQ 70
Y +V+A + G+ AE + ++G + SH+ LL F + N+ + +
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFV--LDSHIGTSLLLGFCRGLNLRDALKVFDV 255
Query: 71 MCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTV---MENGSCEADISTYNILINRYGQ 127
M K V S+L ++G L + G++EE + M C+ TY +LI
Sbjct: 256 MSKEVTCAPNSVSYSIL-IHG-LCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCD 313
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
G IDK LF + +G KP+V T+T I + + +M+ +P T
Sbjct: 314 RGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVIT 373
Query: 188 AKVLLAACSNEDQTEQVTTVIRTMDK 213
L+ + + ++ M+K
Sbjct: 374 YNALINGYCKDGRVVPAFELLTVMEK 399
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 12/213 (5%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
+ D S+ ++ Y G + A V DM + GI PT + +L++ + T + +
Sbjct: 108 QRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKK 167
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+ + + K GL+ + V NS+LN+Y + G + V M DIS++N +I +
Sbjct: 168 VHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRM----VVRDISSWNAMIALHM 223
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI-DSGCYPDG 185
Q G +D F+ + + D+VTW S I ++++ +R L+IF +M+ DS PD
Sbjct: 224 QVGQMDLAMAQFEQMAER----DIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDR 279
Query: 186 GTAKVLLAACSNEDQT---EQVTTVIRTMDKDI 215
T +L+AC+N ++ +Q+ + I T DI
Sbjct: 280 FTLASVLSACANLEKLCIGKQIHSHIVTTGFDI 312
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 100/209 (47%), Gaps = 12/209 (5%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 72
+ L+D Y + G +N A+ +F +K + + ++ + + G+ + ++ M
Sbjct: 350 FTALLDGYIKLGDMNQAKNIFVSLKDRDVV----AWTAMIVGYEQHGSYGEAINLFRSMV 405
Query: 73 KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVL-TVMENGSCEADISTYNILINRYGQAGFI 131
G + +++ L +ML++ L +++ + +++G + +S N LI Y +AG I
Sbjct: 406 GGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYS-VSVSNALITMYAKAGNI 464
Query: 132 DKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVL 191
F L+ + D V+WTS I A ++ LE+FE M+ G PD T +
Sbjct: 465 TSASRAFDLIRCE---RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGV 521
Query: 192 LAACSNE---DQTEQVTTVIRTMDKDIKT 217
+AC++ +Q Q +++ +DK I T
Sbjct: 522 FSACTHAGLVNQGRQYFDMMKDVDKIIPT 550
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 82/185 (44%), Gaps = 11/185 (5%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC- 64
E D ++N ++ + + G+ A +F M R + L S S N+ K
Sbjct: 239 AERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLS--PDRFTLASVLSACANLEKLC 296
Query: 65 --EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILI 122
+ I + + +G + VLN+++++Y R G ++ + G+ + I + L+
Sbjct: 297 IGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIE--QRGTKDLKIEGFTALL 354
Query: 123 NRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCY 182
+ Y + G +++ + +F L + DVV WT+ I Y + Y + +F M+ G
Sbjct: 355 DGYIKLGDMNQAKNIFVSLKDR----DVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQR 410
Query: 183 PDGGT 187
P+ T
Sbjct: 411 PNSYT 415
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 32/234 (13%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P+ ++N ++ AY + A VF +M + P S +L A + + I
Sbjct: 103 PNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQI 162
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
KSGL D FV N+++N+YGR G F +VL M D ++N L++ Y +
Sbjct: 163 HGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMP----VRDAVSWNSLLSAYLE 218
Query: 128 AGFIDKMEGLFQLLHSKGLKP---------------------------DVVTWTSRIGAY 160
G +D+ LF + + ++ DVV+W + + AY
Sbjct: 219 KGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAY 278
Query: 161 SKKKLYVRCLEIFEEMI-DSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
+ Y LE+F +M+ DS PDG T +L+AC++ Q V +DK
Sbjct: 279 AHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDK 332
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 9/206 (4%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
E + S+N ++ Y AG + +A+ VF+ M + S +++A++ G ++ +
Sbjct: 234 ERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVV----SWNAMVTAYAHVGCYNEVLE 289
Query: 67 ILNQMCK-SGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+ N+M S K D F L S+L+ LG + E V ++ E + L++ Y
Sbjct: 290 VFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMY 349
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
+ G IDK +F+ K DV TW S I S L LEIF EM+ G P+G
Sbjct: 350 SKCGKIDKALEVFRATS----KRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNG 405
Query: 186 GTAKVLLAACSNEDQTEQVTTVIRTM 211
T +L+AC++ +Q + M
Sbjct: 406 ITFIGVLSACNHVGMLDQARKLFEMM 431
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 102/246 (41%), Gaps = 35/246 (14%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ + P ++ ++ Y ++G + + VF+ M+R G PT+ + L++ +
Sbjct: 580 MQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQ 639
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADIST--- 117
+ K +IL++M +G+ + ++ Y +G GK E T ++N + DI T
Sbjct: 640 MEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEA 699
Query: 118 --------------------------------YNILINRYGQAGFIDKMEGLFQLLHSKG 145
YNILI+ + + G + + L Q + +G
Sbjct: 700 LLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEG 759
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVT 205
+KPD+ T+TS I A SK R + EEM G P+ T L+ + E+
Sbjct: 760 VKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKAL 819
Query: 206 TVIRTM 211
+ M
Sbjct: 820 SCYEEM 825
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 95/194 (48%), Gaps = 6/194 (3%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
+Q+ G + D +Y L+ A ++G + A AV ++M I + +L+ +++ G+
Sbjct: 685 LQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGD 744
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V + D++ QM K G+K D S ++ + G + + + ME + +I TY
Sbjct: 745 VWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTT 804
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTW----TSRIGAYSKKKLYVR--CLEIFE 174
LI + +A +K ++ + + G+KPD + TS + S + Y+ + I +
Sbjct: 805 LIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICK 864
Query: 175 EMIDSGCYPDGGTA 188
EM+++G D GTA
Sbjct: 865 EMVEAGLIVDMGTA 878
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 88/190 (46%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G + +Y ++ Y G A F ++ G+ + ++ LL A K+G +
Sbjct: 654 GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSA 713
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ +M + ++FV N +++ + R G + +++ M+ + DI TY I+
Sbjct: 714 LAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISA 773
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+AG +++ + + + G+KP++ T+T+ I +++ L + L +EEM G PD
Sbjct: 774 CSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPD 833
Query: 185 GGTAKVLLAA 194
LL +
Sbjct: 834 KAVYHCLLTS 843
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 90/184 (48%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G E +Y+++V + +AG A+ F++ KR+ T + ++ A +T N
Sbjct: 370 MKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCN 429
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + E ++ +M + G+ + ++M++ Y + K V ++ + TY
Sbjct: 430 MERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGC 489
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN Y + G I K + +++ +G+K ++ T++ I + K K + +FE+M+ G
Sbjct: 490 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 549
Query: 181 CYPD 184
PD
Sbjct: 550 MKPD 553
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G + A Y+ ++D Y VF+ +K G TPT+ ++ L++ ++K G
Sbjct: 440 MEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGK 499
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+SK ++ M + G+K + + M+N + +L + V M + D+ YN
Sbjct: 500 ISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNN 559
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I+ + G +D+ + + +P T+ I Y+K R LE+F+ M G
Sbjct: 560 IISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCG 619
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
C P T L+ + Q E+ ++ M
Sbjct: 620 CVPTVHTFNGLINGLVEKRQMEKAVEILDEM 650
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 98/216 (45%), Gaps = 10/216 (4%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G + + +Y+++++ + + +A AVFEDM + G+ P + + ++SAF GN
Sbjct: 510 MKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGN 569
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + + +M K + T +++ Y + G + EV +M C + T+N
Sbjct: 570 MDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNG 629
Query: 121 LINRYGQAGFIDK--MEGLFQLLHS---KGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEE 175
LIN G ++K ME ++L G+ + T+T + Y+ + E F
Sbjct: 630 LIN-----GLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTR 684
Query: 176 MIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+ + G D T + LL AC + + V + M
Sbjct: 685 LQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM 720
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 91/210 (43%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G +PD YN ++ A+ G ++ A ++M+++ PT ++ M ++ ++K+G++ +
Sbjct: 549 GMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRS 608
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
++ + M + G N ++N Q K E+L M A+ TY ++
Sbjct: 609 LEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQG 668
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
Y G K F L ++GL D+ T+ + + A K L + +EM +
Sbjct: 669 YASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRN 728
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
+L+ + + +I+ M K+
Sbjct: 729 SFVYNILIDGWARRGDVWEAADLIQQMKKE 758
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 91/211 (43%), Gaps = 39/211 (18%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
+P R + ++V YGR G ++ A FE M+ GITPT + + L+ A++ ++ +
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQ----------------------FGKM----- 99
+ +M + G+++ + ++ + + G +GK+
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425
Query: 100 --------EEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGL--FQLLHSKGLKPD 149
E ++ ME +A I+ Y+ +++ Y D+ +GL F+ L G P
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVA--DEKKGLVVFKRLKECGFTPT 483
Query: 150 VVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
VVT+ I Y+K + LE+ M + G
Sbjct: 484 VVTYGCLINLYTKVGKISKALEVSRVMKEEG 514
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 91/207 (43%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P ++ ++DAY R G+L DA +F + G P + +L++A + G + E I
Sbjct: 702 PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHI 761
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
+ ++LDT N+++ G+ E+ M I TYN +I+ YG+
Sbjct: 762 SRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGR 821
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
+DK +F GL D +T+ I Y K L +F EM G P +
Sbjct: 822 GLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPS 881
Query: 188 AKVLLAACSNEDQTEQVTTVIRTMDKD 214
+++ C+ +V +++ M+++
Sbjct: 882 YNMMVKICATSRLHHEVDELLQAMERN 908
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 87/182 (47%), Gaps = 2/182 (1%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM 71
+YN ++ YGR L+ A +F + +R G+ K + ++ + K G +S+ + ++M
Sbjct: 811 TYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEM 870
Query: 72 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVME-NGSCEADISTYNILINRYGQAGF 130
K G+K T N M+ + +++E+L ME NG C D+STY LI Y ++
Sbjct: 871 QKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRC-TDLSTYLTLIQVYAESSQ 929
Query: 131 IDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKV 190
+ E L+ KG+ ++S + A K + + +M ++G PD +
Sbjct: 930 FAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRT 989
Query: 191 LL 192
+L
Sbjct: 990 IL 991
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 1/195 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G P+ +Y ++V +Y + GF +A F +MK +G P ++ ++S K G+
Sbjct: 284 MVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGD 343
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
K + M G+ + +ML+LY + + K + ME AD +
Sbjct: 344 WEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGL 403
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I YG+ G + +F+ L D T+ + + V+ L++ EM+ +
Sbjct: 404 IIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVI-EMMKTR 462
Query: 181 CYPDGGTAKVLLAAC 195
P A +++ C
Sbjct: 463 DIPLSRFAYIVMLQC 477
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 3/208 (1%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
GC+P + +ILV+A G +AE + I + L+ A + G +
Sbjct: 734 GCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCA 793
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+I +M SG+ N+M+++YGR Q K E+ + D Y +I
Sbjct: 794 SEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMH 853
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
YG+ G + + LF + KG+KP ++ + + +L+ E+ + M +G D
Sbjct: 854 YGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTD 913
Query: 185 GGTAKVLL---AACSNEDQTEQVTTVIR 209
T L+ A S + E+ T+++
Sbjct: 914 LSTYLTLIQVYAESSQFAEAEKTITLVK 941
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 92/212 (43%)
Query: 3 HMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVS 62
+ P Y I++ YG+ G + AE F +M VG P + +L +++ G S
Sbjct: 181 QLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHS 240
Query: 63 KCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILI 122
+ + + L T V N ML+ + GK+ ++ M + TY +++
Sbjct: 241 AMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVV 300
Query: 123 NRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCY 182
+ Y + GF ++ F + S G P+ VT++S I K + + + ++E+M G
Sbjct: 301 SSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIV 360
Query: 183 PDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
P T +L+ + + ++ M+++
Sbjct: 361 PSNYTCATMLSLYYKTENYPKALSLFADMERN 392
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 87/192 (45%), Gaps = 1/192 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ +G P+ +Y+ ++ +AG A ++EDM+ GI P+ + +LS + KT N
Sbjct: 319 MKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTEN 378
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
K + M ++ + D + ++ +YG+LG F + + E + AD TY
Sbjct: 379 YPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLA 438
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+ + +G + K + +++ ++ + + + Y+K + E F + +G
Sbjct: 439 MSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTG 498
Query: 181 CYPDGGTAKVLL 192
PD + +L
Sbjct: 499 L-PDASSCNDML 509
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 77/176 (43%), Gaps = 1/176 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ D +++ YG+ G +DA+++FE+ +R+ + K+++ + +GN
Sbjct: 389 MERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGN 448
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V K D++ M + L F ML Y ++ EE + D S+ N
Sbjct: 449 VVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCND 507
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
++N Y + +K +G + + + D+ + + + Y K+ + ++ +M
Sbjct: 508 MLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKM 563
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 84/183 (45%), Gaps = 14/183 (7%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M +GCEPD + ++ Y R G + ++ ++ I + + +LS+ K
Sbjct: 214 MLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSF 273
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLG-------QFGKMEEVLTVMENGSCEA 113
K D+ +M + G+ + F +++ Y + G FG+M+ + V E
Sbjct: 274 HGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEE----- 328
Query: 114 DISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIF 173
TY+ +I+ +AG +K GL++ + S+G+ P T + + Y K + Y + L +F
Sbjct: 329 --VTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLF 386
Query: 174 EEM 176
+M
Sbjct: 387 ADM 389
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 88/183 (48%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D Y ++ YG+ G +++A ++F +M++ GI P S+ +++ + + + +++L
Sbjct: 843 DEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELL 902
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
M ++G D +++ +Y QF + E+ +T+++ S ++ L++ +A
Sbjct: 903 QAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKA 962
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTA 188
G +++ E + + G+ PD + + Y + + +E+MI S D +
Sbjct: 963 GMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDDRFVS 1022
Query: 189 KVL 191
V+
Sbjct: 1023 SVV 1025
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 112/247 (45%), Gaps = 37/247 (14%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ P+ + N+++ Y R+G L+ + +DM+R+G T S+ L++ + G
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+S + N M KSGL+ + N++++ + R + + +V M+ + + TYN
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSK------------------ 162
LIN Y Q G + ++ + G++ D++T+ + I K
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 163 -----------------KKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAA-CSNEDQTEQV 204
+K R E+++ MI SGC+P+ T +L++A C NED +
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNED-FDGA 467
Query: 205 TTVIRTM 211
+ V+R M
Sbjct: 468 SQVLREM 474
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 100/214 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G P S N + + G ++ A + +M+R I+P + +++S + ++G
Sbjct: 194 MKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGK 253
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ K ++L M + G + N+++ + G ++ +M + ++ T+N
Sbjct: 254 LDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNT 313
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ + +A + + +F + + + P+ VT+ + I YS++ + +E+M+ +G
Sbjct: 314 LIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNG 373
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
D T L+ + +T + ++ +DK+
Sbjct: 374 IQRDILTYNALIFGLCKQAKTRKAAQFVKELDKE 407
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 82/197 (41%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C+ ++ L + +A F MK G PT++S +S+ G V
Sbjct: 164 CDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIAL 223
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+M + + + + LN +++ Y R G+ K E+L ME A +YN LI +
Sbjct: 224 RFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGH 283
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
+ G + L ++ GL+P+VVT+ + I + + ++F EM P+
Sbjct: 284 CEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNT 343
Query: 186 GTAKVLLAACSNEDQTE 202
T L+ S + E
Sbjct: 344 VTYNTLINGYSQQGDHE 360
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 112/247 (45%), Gaps = 37/247 (14%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ P+ + N+++ Y R+G L+ + +DM+R+G T S+ L++ + G
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+S + N M KSGL+ + N++++ + R + + +V M+ + + TYN
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSK------------------ 162
LIN Y Q G + ++ + G++ D++T+ + I K
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 163 -----------------KKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAA-CSNEDQTEQV 204
+K R E+++ MI SGC+P+ T +L++A C NED +
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNED-FDGA 467
Query: 205 TTVIRTM 211
+ V+R M
Sbjct: 468 SQVLREM 474
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 100/214 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G P S N + + G ++ A + +M+R I+P + +++S + ++G
Sbjct: 194 MKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGK 253
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ K ++L M + G + N+++ + G ++ +M + ++ T+N
Sbjct: 254 LDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNT 313
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ + +A + + +F + + + P+ VT+ + I YS++ + +E+M+ +G
Sbjct: 314 LIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNG 373
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
D T L+ + +T + ++ +DK+
Sbjct: 374 IQRDILTYNALIFGLCKQAKTRKAAQFVKELDKE 407
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 82/197 (41%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C+ ++ L + +A F MK G PT++S +S+ G V
Sbjct: 164 CDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIAL 223
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+M + + + + LN +++ Y R G+ K E+L ME A +YN LI +
Sbjct: 224 RFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGH 283
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
+ G + L ++ GL+P+VVT+ + I + + ++F EM P+
Sbjct: 284 CEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNT 343
Query: 186 GTAKVLLAACSNEDQTE 202
T L+ S + E
Sbjct: 344 VTYNTLINGYSQQGDHE 360
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 100/188 (53%), Gaps = 6/188 (3%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P +NIL++ + R+ L AE ++E+MK + + PT+ ++ L+ + + V ++
Sbjct: 248 PSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEV 307
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMEN-GSCEA--DISTYNILINR 124
L +M + ++++ V N +++ LG+ G++ E L +ME CE+ I TYN L+
Sbjct: 308 LEEMKMAEMEINFMVFNPIID---GLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKN 364
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ +AG + + +++ ++G+ P T+ +SK + ++ ++I++G PD
Sbjct: 365 FCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPD 424
Query: 185 GGTAKVLL 192
T ++L
Sbjct: 425 RLTYHLIL 432
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 85/195 (43%), Gaps = 9/195 (4%)
Query: 15 ILVDAYGRAGFLNDAEAVFEDMKRVGIT------PTMKSHMVLLSAFSKTGNVSKCEDIL 68
+L+DA + G + +A E R+G T P+++ +LL+ + ++ + + E +
Sbjct: 217 VLLDALCKEGHVREASMYLE---RIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLW 273
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
+M +K +++ Y R+ + EVL M+ E + +N +I+ G+A
Sbjct: 274 EEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEA 333
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTA 188
G + + G+ + P +VT+ S + + K +I + M+ G P T
Sbjct: 334 GRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTY 393
Query: 189 KVLLAACSNEDQTEQ 203
S ++TE+
Sbjct: 394 NHFFKYFSKHNKTEE 408
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 79/180 (43%), Gaps = 2/180 (1%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 72
+N ++D G AG L++A + E PT+ ++ L+ F K G++ IL M
Sbjct: 323 FNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMM 382
Query: 73 KSGLKLDTFVLNSMLNLYGRLGQFGK-MEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
G+ T N + + + + M ++E G D TY++++ + G +
Sbjct: 383 TRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHS-PDRLTYHLILKMLCEDGKL 441
Query: 132 DKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVL 191
+ + + ++G+ PD++T T I + ++ E F+ + G P T K++
Sbjct: 442 SLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMI 501
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 3/211 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G P+R +Y IL+ + G +DA +F +M+ G P +H LL F K G
Sbjct: 224 MTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGR 283
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + ++L K G L +S+++ R ++ + E+ M + + DI Y I
Sbjct: 284 MVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTI 343
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI +AG I+ L + SKG+ PD + + I A + L + EM ++
Sbjct: 344 LIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETE 403
Query: 181 CYPDGGTAKVLLAA-CSN--EDQTEQVTTVI 208
+PD T +L+ + C N + E++ T I
Sbjct: 404 SFPDACTHTILICSMCRNGLVREAEEIFTEI 434
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 88/184 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M C P+ ++ IL+D + G +DA+ +F+DM GI+P ++ +L+S + G+
Sbjct: 189 MLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGS 248
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ +M SG D+ N++L+ + +LG+ + E+L + E + Y+
Sbjct: 249 ADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSS 308
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ +A + L+ + K +KPD++ +T I SK L++ M G
Sbjct: 309 LIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKG 368
Query: 181 CYPD 184
PD
Sbjct: 369 ISPD 372
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 41/202 (20%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G PD YN ++ A G L + ++ +M P +H +L+ + + G
Sbjct: 364 MPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGL 423
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLN-------------------------LYGRLGQ 95
V + E+I ++ KSG N++++ L+ RL
Sbjct: 424 VREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSH 483
Query: 96 FGKMEEVLTVMENGS---------------CEADISTYNILINRYGQAGFIDKMEGLFQL 140
G T++E+GS DI +YN+LIN + +AG ID L +
Sbjct: 484 SGN-RSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNV 542
Query: 141 LHSKGLKPDVVTWTSRIGAYSK 162
L KGL PD VT+ + I +
Sbjct: 543 LQLKGLSPDSVTYNTLINGLHR 564
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 1/183 (0%)
Query: 33 FEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGR 92
E++K G++ VL+SA++K G K + +M + + D F N +L + R
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMR 174
Query: 93 LGQFGKME-EVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVV 151
F + V M +C ++ T+ IL++ + G + +F + +G+ P+ V
Sbjct: 175 EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRV 234
Query: 152 TWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
T+T I ++ ++F EM SG YPD LL + + ++R
Sbjct: 235 TYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLF 294
Query: 212 DKD 214
+KD
Sbjct: 295 EKD 297
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 93/189 (49%), Gaps = 8/189 (4%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D ++N +++ Y R G +++A +FE+MK + P ++SA +TGN+ I
Sbjct: 176 DVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIY 235
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
+ ++ +++DT +L +++ +Y G E M ++ +++ Y +
Sbjct: 236 EFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMS----VRNLFVSTAMVSGYSKC 291
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTA 188
G +D + +F + K D+V WT+ I AY + L +FEEM SG PD +
Sbjct: 292 GRLDDAQVIFD----QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSM 347
Query: 189 KVLLAACSN 197
+++AC+N
Sbjct: 348 FSVISACAN 356
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 91/196 (46%), Gaps = 8/196 (4%)
Query: 16 LVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSG 75
+V Y + G L+DA+ +F+ ++ + ++SA+ ++ + + +MC SG
Sbjct: 284 MVSGYSKCGRLDDAQVIFDQTEKKDLV----CWTTMISAYVESDYPQEALRVFEEMCCSG 339
Query: 76 LKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKME 135
+K D + S+++ LG K + V + + E+++S N LIN Y + G +D
Sbjct: 340 IKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATR 399
Query: 136 GLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAAC 195
+F+ K + +VV+W+S I A S L +F M P+ T +L C
Sbjct: 400 DVFE----KMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGC 455
Query: 196 SNEDQTEQVTTVIRTM 211
S+ E+ + +M
Sbjct: 456 SHSGLVEEGKKIFASM 471
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 78/170 (45%), Gaps = 4/170 (2%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D + ++ AY + + +A VFE+M GI P + S ++SA + G + K + +
Sbjct: 308 DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVH 367
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
+ + +GL+ + + N+++N+Y + G +V M ++ +++ +IN
Sbjct: 368 SCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP----RRNVVSWSSMINALSMH 423
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID 178
G LF + + ++P+ VT+ + S L +IF M D
Sbjct: 424 GEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTD 473
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 90/177 (50%), Gaps = 1/177 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G EP+ YN ++ A+ R ++ A ++F +M G+ P ++ +L+ F K +
Sbjct: 475 MEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKD 534
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVL-TVMENGSCEADISTYN 119
D++NQM S + + + N+++N ++GQ K +E+L +++ ++YN
Sbjct: 535 EQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYN 594
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
+I+ + + G D ++ + G P+VVT+TS I + K LE+ EM
Sbjct: 595 SIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEM 651
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 93/202 (46%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM 71
SYN ++D + + G + A + +M G +P + + L++ F K+ + ++ ++M
Sbjct: 592 SYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEM 651
Query: 72 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
LKLD ++++ + + + + + ++S YN LI+ + G +
Sbjct: 652 KSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKM 711
Query: 132 DKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVL 191
D L++ + + G+ D+ T+T+ I K +++ E++D G PD VL
Sbjct: 712 DAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVL 771
Query: 192 LAACSNEDQTEQVTTVIRTMDK 213
+ S + Q + + ++ M K
Sbjct: 772 VNGLSKKGQFLKASKMLEEMKK 793
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/193 (18%), Positives = 86/193 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ M + D +Y L+D + + + A +F ++ +G+ P + + L+S F G
Sbjct: 651 MKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGK 710
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ D+ +M G+ D F +M++ + G ++ + + + D + +
Sbjct: 711 MDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMV 770
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L+N + G K + + + K + P+V+ +++ I + ++ + +EM++ G
Sbjct: 771 LVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKG 830
Query: 181 CYPDGGTAKVLLA 193
D +L++
Sbjct: 831 IVHDDTVFNLLVS 843
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 85/184 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G P+ ++ L++ + ++ ++ A + +MK + + + ++ L+ F K +
Sbjct: 616 MSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKND 675
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + +++ + GL + V NS+++ + LG+ ++ M N D+ TY
Sbjct: 676 MKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTT 735
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I+ + G I+ L+ L G+ PD + + SKK +++ ++ EEM
Sbjct: 736 MIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKD 795
Query: 181 CYPD 184
P+
Sbjct: 796 VTPN 799
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/243 (19%), Positives = 98/243 (40%), Gaps = 34/243 (13%)
Query: 4 MGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSK 63
+G + +Y ++ A+ + G + +A V ++M GI ++ + L++ + K + K
Sbjct: 304 LGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGK 363
Query: 64 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMEN--------------- 108
D+ N+M + GL D + + M+ + + + K E M++
Sbjct: 364 ALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQ 423
Query: 109 -----GSCEADISTYNILINRYGQAGF--------------IDKMEGLFQLLHSKGLKPD 149
S EA + +N + GF +D +++ KG++P+
Sbjct: 424 GCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPN 483
Query: 150 VVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIR 209
VV + + + A+ + K IF EM++ G P+ T +L+ + VI
Sbjct: 484 VVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVIN 543
Query: 210 TMD 212
M+
Sbjct: 544 QMN 546
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 96/210 (45%), Gaps = 2/210 (0%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMK-RVGITPTMKSHMVLLSAFSKTGNVSK 63
G EPD +++ V A + L A + +M+ ++G+ + +++ ++ AF K GN+ +
Sbjct: 269 GAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEE 328
Query: 64 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN 123
++++M G+ + S++N Y + + GK ++ ME D +++++
Sbjct: 329 AVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVE 388
Query: 124 RYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYP 183
+ + ++K + + S + P V + I K + LEIF + +S
Sbjct: 389 WFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAH 448
Query: 184 DGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
K+ L C + + + T+ ++ M++
Sbjct: 449 GFMCNKIFLLFCK-QGKVDAATSFLKMMEQ 477
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 77/176 (43%), Gaps = 1/176 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G PD+ ++++V+ + + + A + MK V I P+ ++ K +
Sbjct: 371 MEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAES 430
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+I N +S + F+ N + L+ + G+ L +ME E ++ YN
Sbjct: 431 PEAALEIFNDSFESWIA-HGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNN 489
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
++ + + +D +F + KGL+P+ T++ I + K K ++ +M
Sbjct: 490 MMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQM 545
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 90/192 (46%), Gaps = 1/192 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G +P+ A Y +L+D Y ++G + DA + M G P + ++ V+++ K G
Sbjct: 353 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 412
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V + D + GL +++ +S+++ G+ G+ + E + M C D YN
Sbjct: 413 VEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNA 472
Query: 121 LINRYGQAGFIDKMEGLFQLL-HSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
LI+ + + +D+ LF+ + +G V T+T + K+ L++++ MID
Sbjct: 473 LIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDK 532
Query: 180 GCYPDGGTAKVL 191
G P + L
Sbjct: 533 GITPTAACFRAL 544
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 90/210 (42%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G EP +YN L++ A F++ AE VFE M+ I P + ++ ++ + K G
Sbjct: 213 MKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQ 272
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
K + L M G + D +M+ FG + M+ + +++
Sbjct: 273 TQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSL 332
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I + G +++ +F+ + KG KP+V +T I Y+K + + MID G
Sbjct: 333 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 392
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRT 210
PD T V++ + E+ T
Sbjct: 393 FKPDVVTYSVVVNGLCKNGRVEEALDYFHT 422
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 8/205 (3%)
Query: 11 ASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQ 70
++ N L+ ++G+ G + + V+ MK GI PT+ ++ L++ V E +
Sbjct: 188 SAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEV 247
Query: 71 MCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGF 130
M +K D N+M+ Y + GQ K E L ME EAD TY +I QA +
Sbjct: 248 MESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMI----QACY 303
Query: 131 IDKMEG----LFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGG 186
D G L+Q + KG++ ++ IG K+ +FE MI G P+
Sbjct: 304 ADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVA 363
Query: 187 TAKVLLAACSNEDQTEQVTTVIRTM 211
VL+ + E ++ M
Sbjct: 364 IYTVLIDGYAKSGSVEDAIRLLHRM 388
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 82/177 (46%)
Query: 37 KRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQF 96
K+ T ++ ++ L+ + +V + + +++ K + N+++ +G+LG
Sbjct: 144 KQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMV 203
Query: 97 GKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSR 156
++ V M+ E + TYN L+N A F+D E +F+++ S +KPD+VT+ +
Sbjct: 204 EELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTM 263
Query: 157 IGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
I Y K + +E +M G D T ++ AC + + + MD+
Sbjct: 264 IKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDE 320
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 72
Y LVD A ++ V ++K+ T+ + L+ +F K G V + + +M
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 214
Query: 73 KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFID 132
++G++ + N ++N E V VME+G + DI TYN +I Y +AG
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 133 KMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLL 192
K + + ++G + D +T+ + I A + C+ +++EM + G +++
Sbjct: 275 KAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVI 334
Query: 193 AACSNEDQTEQVTTVIRTM 211
E + + TV M
Sbjct: 335 GGLCKEGKLNEGYTVFENM 353
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 10/204 (4%)
Query: 1 MQHMGCEPDRASYNILVDAY---GRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSK 57
M+ GC P+ SYN L+D Y G G + A+AV ++M ++P + + +L+ F K
Sbjct: 249 MKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWK 308
Query: 58 TGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTV---MENGSCEAD 114
N+ + +M +K + NS++N L GK+ E +++ M + + +
Sbjct: 309 DDNLPGSMKVFKEMLDQDVKPNVISYNSLIN---GLCNGGKISEAISMRDKMVSAGVQPN 365
Query: 115 ISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFE 174
+ TYN LIN + + + + +F + +G P + I AY K + E
Sbjct: 366 LITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKE 425
Query: 175 EMIDSGCYPDGGTAKVLLAA-CSN 197
EM G PD GT L+A C N
Sbjct: 426 EMEREGIVPDVGTYNCLIAGLCRN 449
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 92/188 (48%), Gaps = 2/188 (1%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G P YN+L+DAY + G ++D A+ E+M+R GI P + ++ L++ + GN+
Sbjct: 396 GAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ + +Q+ GL D + ++ Y R G+ K +L M + TYNI++
Sbjct: 456 KKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKG 514
Query: 125 YGQAGFIDKMEGL-FQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYP 183
Y + G + + Q+ + L+ +V ++ + YS+K + EM++ G P
Sbjct: 515 YCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVP 574
Query: 184 DGGTAKVL 191
+ T +++
Sbjct: 575 NRITYEIV 582
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 1/208 (0%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
+P+ SYN L++ G +++A ++ + M G+ P + ++ L++ F K + + D
Sbjct: 328 KPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALD 387
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+ + G T + N +++ Y +LG+ + ME D+ TYN LI
Sbjct: 388 MFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLC 447
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGG 186
+ G I+ + LF L SKGL PD+VT+ + Y +K + + +EM G P
Sbjct: 448 RNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHL 506
Query: 187 TAKVLLAACSNEDQTEQVTTVIRTMDKD 214
T +++ E + T + M+K+
Sbjct: 507 TYNIVMKGYCKEGNLKAATNMRTQMEKE 534
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 93/191 (48%), Gaps = 3/191 (1%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSK---TGNVSK 63
+P+ ++N++++A + G +N A V EDMK G +P + S+ L+ + K G + K
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYK 279
Query: 64 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN 123
+ +L +M ++ + + N +++ + + +V M + + ++ +YN LIN
Sbjct: 280 ADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLIN 339
Query: 124 RYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYP 183
G I + + + S G++P+++T+ + I + K + L++F + G P
Sbjct: 340 GLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVP 399
Query: 184 DGGTAKVLLAA 194
+L+ A
Sbjct: 400 TTRMYNMLIDA 410
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 18/185 (9%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G PD +YN L+ R G + A+ +F+ + G+ P + + +L+ + + G
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGE 485
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMEN-GSCEADISTYN 119
K +L +M K GLK N ++ Y + G + T ME ++++YN
Sbjct: 486 SRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYN 545
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
+L+ Y Q G ++ L + KGL P+ +T+ + EEM+D
Sbjct: 546 VLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEI----------------VKEEMVDQ 589
Query: 180 GCYPD 184
G PD
Sbjct: 590 GFVPD 594
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 89/175 (50%), Gaps = 4/175 (2%)
Query: 28 DAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSML 87
D E V+++M R I P + + V+++A KTG ++K D++ M G + N+++
Sbjct: 206 DVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLI 265
Query: 88 NLYGRLGQFGKM---EEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSK 144
+ Y +LG GKM + VL M +++T+NILI+ + + + +F+ + +
Sbjct: 266 DGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ 325
Query: 145 GLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAA-CSNE 198
+KP+V+++ S I + + ++M+ +G P+ T L+ C N+
Sbjct: 326 DVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKND 380
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
PD +++IL++ Y R G A + ++M ++G+ P ++ +++ + K GN+ ++
Sbjct: 468 PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNM 527
Query: 68 LNQMCKSG-LKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
QM K L+++ N +L Y + G+ +L M + TY I+
Sbjct: 528 RTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMV 587
Query: 127 QAGFIDKMEG-LFQL 140
GF+ +EG LF +
Sbjct: 588 DQGFVPDIEGHLFNV 602
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 90/188 (47%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G P +Y L+D + G + AE + +M+ G+ T L+ + + G V +
Sbjct: 359 GLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEA 418
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
I + M + G + D F N++ + + RL ++ + ++ L M G + +Y LI+
Sbjct: 419 SMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDV 478
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
Y + G +++ + LF + SKG++P+ +T+ I AY K+ ++ M +G PD
Sbjct: 479 YCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPD 538
Query: 185 GGTAKVLL 192
T L+
Sbjct: 539 SYTYTSLI 546
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 102/215 (47%), Gaps = 2/215 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G E D Y L+ R G + A +F+++ G++P+ ++ L+ K G
Sbjct: 320 MRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGE 379
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ E ++N+M G+ + V N++++ Y R G + + VME +AD+ T N
Sbjct: 380 MGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNT 439
Query: 121 LINRYGQAGFIDKM-EGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
+ + + + D+ + LF+++ G+K V++T+ I Y K+ +F EM
Sbjct: 440 IASCFNRLKRYDEAKQWLFRMMEG-GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSK 498
Query: 180 GCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
G P+ T V++ A + + ++ + M+ +
Sbjct: 499 GVQPNAITYNVMIYAYCKQGKIKEARKLRANMEAN 533
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 96/203 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ G + +N L+D Y R G +++A +++ M++ G + + + S F++
Sbjct: 390 MQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKR 449
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + L +M + G+KL T +++++Y + G + + + M + + + TYN+
Sbjct: 450 YDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNV 509
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I Y + G I + L + + G+ PD T+TS I + +F EM G
Sbjct: 510 MIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKG 569
Query: 181 CYPDGGTAKVLLAACSNEDQTEQ 203
+ T V+++ S ++++
Sbjct: 570 LDQNSVTYTVMISGLSKAGKSDE 592
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 92/180 (51%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G ++ +Y +L++ + G ++DAE +F++M+ GI + + L+S + GN
Sbjct: 285 MKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGN 344
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + + +++ + GL ++ ++++ ++G+ G E ++ M++ +N
Sbjct: 345 MKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNT 404
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ Y + G +D+ ++ ++ KG + DV T + +++ K Y + M++ G
Sbjct: 405 LIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGG 464
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 76/161 (47%)
Query: 32 VFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYG 91
+F M G+ T+ S +++ + G V K + ++ + G+K + + N+++N Y
Sbjct: 211 IFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYV 270
Query: 92 RLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVV 151
+ F +E VL VM+ + TY +L+ + G + E LF + +G++ DV
Sbjct: 271 KQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVH 330
Query: 152 TWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLL 192
+TS I +K R +F+E+ + G P T L+
Sbjct: 331 VYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALI 371
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 83/194 (42%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G + D + N + + R ++A+ M G+ + S+ L+ + K GN
Sbjct: 425 MEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGN 484
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V + + + +M G++ + N M+ Y + G+ + ++ ME + D TY
Sbjct: 485 VEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTS 544
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ A +D+ LF + KGL + VT+T I SK +++EM G
Sbjct: 545 LIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKG 604
Query: 181 CYPDGGTAKVLLAA 194
D L+ +
Sbjct: 605 YTIDNKVYTALIGS 618
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 79/171 (46%)
Query: 14 NILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCK 73
+++ Y G + VF+ M + G++ +S +V L A K + C +I +M
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD 217
Query: 74 SGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDK 133
SG+K+ + L ++ R G+ K ++++ + + TYN +IN Y +
Sbjct: 218 SGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSG 277
Query: 134 MEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+EG+ +++ G+ + VT+T + K ++F+EM + G D
Sbjct: 278 VEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESD 328
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM 71
S I+V+ R G + ++ + ++ GI P ++ +++A+ K + S E +L M
Sbjct: 226 SLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVM 285
Query: 72 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
K G+ + ++ L + G+ E++ M E+D+ Y LI+ + G +
Sbjct: 286 KKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNM 345
Query: 132 DKMEGLFQLLHSKGLKPDVVTWTSRIGAYSK 162
+ LF L KGL P T+ + I K
Sbjct: 346 KRAFLLFDELTEKGLSPSSYTYGALIDGVCK 376
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 7/174 (4%)
Query: 14 NILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCK 73
N+L++ G ++A+ VF+ + G P++ S+ LL+A + I++++ +
Sbjct: 53 NVLIER----GRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108
Query: 74 SGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDK 133
SG KLD+ N+++N + G + L M+ STYN LI YG AG ++
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168
Query: 134 MEGLFQLLHSKG---LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
L L+ +G + P++ T+ + A+ KKK E+ ++M + G PD
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPD 222
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 91/179 (50%), Gaps = 2/179 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEA-VFEDM-KRVGITPTMKSHMVLLSAFSKT 58
M+ G PD +YN + Y + G AE+ V E M + P ++ +++ + +
Sbjct: 214 MEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCRE 273
Query: 59 GNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTY 118
G V + +M + ++ + V NS++N + + ++EVLT+M+ + +AD+ TY
Sbjct: 274 GRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITY 333
Query: 119 NILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
+ ++N + AG+++K +F+ + G+KPD ++ Y + K + E+ E +I
Sbjct: 334 STVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI 392
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 112/251 (44%), Gaps = 40/251 (15%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVG---ITPTMKSHMVLLSAFSK 57
M+ +G P ++YN L+ YG AG + + + M G + P +++ VL+ A+ K
Sbjct: 141 MKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCK 200
Query: 58 TGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKME-EVLTVM-------ENG 109
V + +++ +M + G++ DT N++ Y + G+ + E EV+ M NG
Sbjct: 201 KKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNG 260
Query: 110 -SC----------------------------EADISTYNILINRYGQAGFIDKMEGLFQL 140
+C EA++ +N LIN + + D ++ + L
Sbjct: 261 RTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTL 320
Query: 141 LHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQ 200
+ +K DV+T+++ + A+S + ++F+EM+ +G PD +L +
Sbjct: 321 MKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKE 380
Query: 201 TEQVTTVIRTM 211
++ ++ T+
Sbjct: 381 PKKAEELLETL 391
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 1/147 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G +PD +Y+IL Y RA AE + E + V P + ++S + G+
Sbjct: 356 MVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI-VESRPNVVIFTTVISGWCSNGS 414
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + N+MCK G+ + +++ Y + Q K EEVL +M + + ST+ +
Sbjct: 415 MDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLL 474
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLK 147
L + AG D+ L K ++
Sbjct: 475 LAEAWRVAGLTDESNKAINALKCKDIE 501
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 7/174 (4%)
Query: 14 NILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCK 73
N+L++ G ++A+ VF+ + G P++ S+ LL+A + I++++ +
Sbjct: 53 NVLIER----GRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108
Query: 74 SGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDK 133
SG KLD+ N+++N + G + L M+ STYN LI YG AG ++
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168
Query: 134 MEGLFQLLHSKG---LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
L L+ +G + P++ T+ + A+ KKK E+ ++M + G PD
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPD 222
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 113/281 (40%), Gaps = 75/281 (26%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVG---ITPTMKSHMVLLSAFSK 57
M+ +G P ++YN L+ YG AG + + + M G + P +++ VL+ A+ K
Sbjct: 141 MKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCK 200
Query: 58 TGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKME-EVLTVM-------ENG 109
V + +++ +M + G++ DT N++ Y + G+ + E EV+ M NG
Sbjct: 201 KKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNG 260
Query: 110 -SC----------------------------EADISTYNILINRYGQAGFIDKME----- 135
+C EA++ +N LIN GF++ M+
Sbjct: 261 RTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLIN-----GFVEVMDRDGID 315
Query: 136 -------------------------GLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCL 170
+ L+ +K DV+T+++ + A+S +
Sbjct: 316 EVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAA 375
Query: 171 EIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
++F+EM+ +G PD +L + ++ ++ T+
Sbjct: 376 QVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETL 416
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 93/204 (45%), Gaps = 27/204 (13%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEA-VFEDM-KRVGITPTMKSHMVLLSAFSKT 58
M+ G PD +YN + Y + G AE+ V E M + P ++ +++ + +
Sbjct: 214 MEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCRE 273
Query: 59 GNVSKCEDILNQMCKSGLKLDTFVLNSMLN---------------LYGRLGQFG------ 97
G V + +M + ++ + V NS++N L L F
Sbjct: 274 GRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELV 333
Query: 98 ---KME-EVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTW 153
KM+ +VLT+M+ + +AD+ TY+ ++N + AG+++K +F+ + G+KPD +
Sbjct: 334 GNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAY 393
Query: 154 TSRIGAYSKKKLYVRCLEIFEEMI 177
+ Y + K + E+ E +I
Sbjct: 394 SILAKGYVRAKEPKKAEELLETLI 417
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 1/147 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G +PD +Y+IL Y RA AE + E + V P + ++S + G+
Sbjct: 381 MVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI-VESRPNVVIFTTVISGWCSNGS 439
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + N+MCK G+ + +++ Y + Q K EEVL +M + + ST+ +
Sbjct: 440 MDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLL 499
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLK 147
L + AG D+ L K ++
Sbjct: 500 LAEAWRVAGLTDESNKAINALKCKDIE 526
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 96/189 (50%), Gaps = 3/189 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDM-KRVGITPTMKSHMVLLSAFSKTG 59
M + CE S+N L+ AY + L++A F+++ +++GITP + ++ ++ A + G
Sbjct: 148 MPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKG 207
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
++ I ++ K+G + D N++L + R F + + + +M++ + +I +YN
Sbjct: 208 SMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYN 267
Query: 120 ILINRYGQ-AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID 178
+ + F D + L ++ ++G+ PDV T+ + I AY ++ + EM +
Sbjct: 268 SRVRGLTRNKKFTDAL-NLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKE 326
Query: 179 SGCYPDGGT 187
G PD T
Sbjct: 327 KGLTPDTVT 335
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%)
Query: 2 QHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNV 61
+ +G PD +YN ++ A R G ++D ++FE++++ G P + S LL F +
Sbjct: 185 EKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELF 244
Query: 62 SKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNIL 121
+ + I + M L + NS + R +F ++ VM+ D+ TYN L
Sbjct: 245 VEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNAL 304
Query: 122 INRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
I Y ++++ + + KGL PD VT+ I KK R +E+ EE I
Sbjct: 305 ITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAI 360
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 86/186 (46%), Gaps = 1/186 (0%)
Query: 20 YGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC-KSGLKL 78
YG +G A +F++M + T+KS LLSA+ + + + ++ K G+
Sbjct: 132 YGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITP 191
Query: 79 DTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLF 138
D N+M+ R G + + +E E D+ ++N L+ + + + + ++
Sbjct: 192 DLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIW 251
Query: 139 QLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNE 198
L+ SK L P++ ++ SR+ ++ K + L + + M G PD T L+ A +
Sbjct: 252 DLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVD 311
Query: 199 DQTEQV 204
+ E+V
Sbjct: 312 NNLEEV 317
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 76 LKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKME 135
+K + FV+ ML LYG G ++ M +CE + ++N L++ Y + +D+
Sbjct: 119 IKSEDFVIRIML-LYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAM 177
Query: 136 GLFQLLHSK-GLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
F+ L K G+ PD+VT+ + I A +K L IFEE+ +G PD
Sbjct: 178 KTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPD 227
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 93/192 (48%), Gaps = 9/192 (4%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C P+ +YN L++ + + + D +F +M + G+ ++ ++ F + G+ +
Sbjct: 394 CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQ 453
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTV---MENGSCEADISTYNILI 122
+ QM + + D ++ + L+G L +GK++ L + ++ E +I YN +I
Sbjct: 454 MVFKQMVSNRVPTD--IMTYSILLHG-LCSYGKLDTALVIFKYLQKSEMELNIFIYNTMI 510
Query: 123 NRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCY 182
+AG K+ + L S +KPDVVT+ + I K+L ++F +M + G
Sbjct: 511 EGMCKAG---KVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTL 567
Query: 183 PDGGTAKVLLAA 194
P+ GT L+ A
Sbjct: 568 PNSGTYNTLIRA 579
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 98/213 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G P+ +YN L++ G +DA + +M I P + + L+ AF K G
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK 343
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + E + +M + + DT N ++N + + + +++ M + C +I TYN
Sbjct: 344 LVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNT 403
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN + + ++ LF+ + +GL + VT+T+ I + + +F++M+ +
Sbjct: 404 LINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR 463
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
D T +LL + + + + + + K
Sbjct: 464 VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQK 496
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 4/213 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ +G D +Y+I ++ + R L+ A AV M ++G P + + LL+ + +
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTV--MENGSCEADISTY 118
+S +++QM + G K DTF ++ ++G E V V M C+ D+ TY
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTL--IHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 119 NILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID 178
++N + G ID L + + +K +VV + + I + K + +++F EM
Sbjct: 227 GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286
Query: 179 SGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
G P+ T L+ N + + ++ M
Sbjct: 287 KGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 97/211 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M MG +PD ++ L+ ++A A+ + M + G P + ++ +++ K G+
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ ++LN+M + +K + + N++++ + ++ T ME ++ TYN
Sbjct: 239 IDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNS 298
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN G L + K + P+VVT+ + I A+ K+ V ++ EEMI
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
PD T +L+ ++ ++ + + M
Sbjct: 359 IDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 91/213 (42%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC+PD +Y +V+ + G ++ A + M+ I + ++ + K +
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRH 273
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V D+ +M G++ + NS++N G++ +L+ M ++ T+N
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ + + G + + E L + + + + PD +T+ I + ++F+ M+
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD 393
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
C P+ T L+ + E + R M +
Sbjct: 394 CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ 426
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 84/168 (50%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 72
+N ++D+ + + A +F +M+ GI P + ++ L++ G S +L+ M
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 73 KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFID 132
+ + + N++++ + + G+ + E++ M S + D TYN+LIN + +D
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 133 KMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+ + +F+ + SK P++ T+ + I + K K +E+F EM G
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRG 428
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 97/222 (43%), Gaps = 5/222 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M +G EPD + + L++ Y + ++DA A+ + M +G P + L+
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S+ +++QM + G + D +++N + G +L ME +A++ +N
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNT 263
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I+ + ++ LF + +KG++P+VVT+ S I + + M++
Sbjct: 264 IIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK 323
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTT-----VIRTMDKDIKT 217
P+ T L+ A E + + + R++D D T
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTIT 365
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 86/191 (45%), Gaps = 3/191 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G + +Y ++ + +AG + A+ VF+ M + + ++ +LL G
Sbjct: 424 MSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGK 483
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ I + KS ++L+ F+ N+M+ + G+ G+ ++ + S + D+ TYN
Sbjct: 484 LDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNT 540
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I+ + + + LF+ + G P+ T+ + I A + E+ +EM SG
Sbjct: 541 MISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSG 600
Query: 181 CYPDGGTAKVL 191
D T ++
Sbjct: 601 FVGDASTISLV 611
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 66/159 (41%)
Query: 26 LNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNS 85
++DA +F DM + P++ LLSA +K + QM G+ D + +
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
+N + R Q VL M E DI T + L+N Y + I L + G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
KPD T+T+ I + + ++M+ GC PD
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD 222
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 4/194 (2%)
Query: 2 QHMGCEPDRASY---NILVDAYGRAGFLNDAEAVFEDMKRVGITP-TMKSHMVLLSAFSK 57
Q + +PD N + Y G L+ A +FE +G+T T ++ ++S+F K
Sbjct: 583 QRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVK 642
Query: 58 TGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADIST 117
G +L+QM ++ D N ++ G++G+ VL + DI
Sbjct: 643 KGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVM 702
Query: 118 YNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
YN LIN G+A +D+ LF + S G+ PDVV++ + I SK + + M+
Sbjct: 703 YNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAML 762
Query: 178 DSGCYPDGGTAKVL 191
D+GC P+ T +L
Sbjct: 763 DAGCLPNHVTDTIL 776
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 6/166 (3%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ+ G PD YN L+D +A + +A +FE M + G+ + ++ +L+ + G
Sbjct: 350 MQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGR 409
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKME---EVLTVMENGSCEADIST 117
+ + K G +D S++ L +L + GK+E +++ ME D+ T
Sbjct: 410 AEAGFTLFCDLKKKGQFVDAITF-SIVGL--QLCREGKLEGAVKLVEEMETRGFSVDLVT 466
Query: 118 YNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKK 163
+ L+ + + G D E L + + L P+V+ W + + A K+
Sbjct: 467 ISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKR 512
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 87/174 (50%), Gaps = 2/174 (1%)
Query: 7 EPDRAS--YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
+P+ S ++ L+ Y +AG +ND+ VFE ++ G+ P +++ VLL++ K
Sbjct: 128 DPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTV 187
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
I +M K G+ + V N +++ + G K E++L+ ME DI TYN LI+
Sbjct: 188 WKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISV 247
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID 178
Y + + + + G+ P++VT+ S I +S++ +F E+ D
Sbjct: 248 YCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD 301
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 94/192 (48%), Gaps = 1/192 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G PD +YN L+ Y + +A +V + M+R G+ P + ++ + FS+ G
Sbjct: 229 MEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGR 288
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + + ++ K + + ++++ Y R+ + + VME+ + TYN
Sbjct: 289 MREATRLFREI-KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNS 347
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
++ + + G I + L + K ++PD +T + I AY K + V +++ ++MI+SG
Sbjct: 348 ILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESG 407
Query: 181 CYPDGGTAKVLL 192
D + K L+
Sbjct: 408 LKLDMYSYKALI 419
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 96/211 (45%), Gaps = 9/211 (4%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G +P + +L+++ + + +F+ M ++G+ + + VL+ A SK+G+ K
Sbjct: 163 GLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKA 222
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
E +L++M + G+ D F N+++++Y + + V ME +I TYN I+
Sbjct: 223 EKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHG 282
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDV----VTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+ + G + + LF + +K DV VT+T+ I Y + L + E M G
Sbjct: 283 FSREGRMREATRLF-----REIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRG 337
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
P T +L + + + ++ M
Sbjct: 338 FSPGVVTYNSILRKLCEDGRIREANRLLTEM 368
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 1/213 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G P+ +YN + + R G + +A +F ++K +T ++ L+ + + +
Sbjct: 264 MERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMND 322
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + + M G NS+L G+ + +LT M E D T N
Sbjct: 323 IDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNT 382
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN Y + + + + + GLK D+ ++ + I + K E MI+ G
Sbjct: 383 LINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKG 442
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
P T L+ N+++ +++T ++ +K
Sbjct: 443 FSPGYATYSWLVDGFYNQNKQDEITKLLEEFEK 475
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 71/156 (45%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
EPD + N L++AY + + A V + M G+ M S+ L+ F K + ++
Sbjct: 374 EPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKE 433
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
L M + G + +++ + + ++ ++L E AD++ Y LI R
Sbjct: 434 ELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRIC 493
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSK 162
+ +D + LF+ + KGL D V +T+ AY +
Sbjct: 494 KLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWR 529
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 6/216 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVF---EDMKRVGITPTMKSHMVLLSAFSK 57
M M P+ +Y I +D + A+A+F E + GI + + + L++ K
Sbjct: 634 MMLMEIHPNLTTYRIFLDTSSKH---KRADAIFKTHETLLSYGIKLSRQVYNTLIATLCK 690
Query: 58 TGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADIST 117
G K ++ M G DT NS+++ Y K +VM +++T
Sbjct: 691 LGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVAT 750
Query: 118 YNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
YN +I AG I +++ + S+G++PD T+ + I +K + I+ EMI
Sbjct: 751 YNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMI 810
Query: 178 DSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
G P T VL++ +N + Q +++ M K
Sbjct: 811 ADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGK 846
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 87/184 (47%), Gaps = 7/184 (3%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D +YN ++ G ++A +M ++GI P S+ L+ F K GN + + ++
Sbjct: 160 DTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALV 219
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
+++ + L T +L+S NL+ +EE M + D+ T++ +INR +
Sbjct: 220 DEISELNLITHTILLSSYYNLHA-------IEEAYRDMVMSGFDPDVVTFSSIINRLCKG 272
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTA 188
G + + L + + + P+ VT+T+ + + K +Y L ++ +M+ G D
Sbjct: 273 GKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVY 332
Query: 189 KVLL 192
VL+
Sbjct: 333 TVLM 336
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 85/183 (46%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G +PD +++ +++ + G + + + +M+ + + P ++ L+ + K
Sbjct: 254 GFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHA 313
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ +QM G+ +D V +++ + G + E+ ++ + ++ TY L++
Sbjct: 314 LALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDG 373
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+AG + E + + K + P+VVT++S I Y KK + + + +M D P+
Sbjct: 374 LCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPN 433
Query: 185 GGT 187
G T
Sbjct: 434 GFT 436
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 97/219 (44%), Gaps = 14/219 (6%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M MG PD SYN L+D + + G A+A+ +++ + + +H +LLS++ N
Sbjct: 187 MVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLI----THTILLSSYY---N 239
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEE---VLTVMENGSCEADIST 117
+ E+ M SG D +S++N RL + GK+ E +L ME S + T
Sbjct: 240 LHAIEEAYRDMVMSGFDPDVVTFSSIIN---RLCKGGKVLEGGLLLREMEEMSVYPNHVT 296
Query: 118 YNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
Y L++ +A L+ + +G+ D+V +T + K + F+ ++
Sbjct: 297 YTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLL 356
Query: 178 DSGCYPDGGTAKVLL-AACSNEDQTEQVTTVIRTMDKDI 215
+ P+ T L+ C D + + + ++K +
Sbjct: 357 EDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSV 395
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 92/204 (45%), Gaps = 1/204 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ +G E + + LV+ R G + + + + +DM G+T ++ L+ F K G+
Sbjct: 460 MRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGD 519
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+M + G+ D N +++ + G+ G + E G E DI+T+NI
Sbjct: 520 EEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKG-IEPDIATFNI 578
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
++N + G + + L+ + S G+KP +++ +G + + I +M+
Sbjct: 579 MMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLME 638
Query: 181 CYPDGGTAKVLLAACSNEDQTEQV 204
+P+ T ++ L S + + +
Sbjct: 639 IHPNLTTYRIFLDTSSKHKRADAI 662
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 78/176 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ M P+ +Y LVD+ +A A A++ M GI + + VL+ K G+
Sbjct: 285 MEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGD 344
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + E + + + ++++ + G E ++T M S ++ TY+
Sbjct: 345 LREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSS 404
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
+IN Y + G +++ L + + + + P+ T+ + I K +E+ +EM
Sbjct: 405 MINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 22/197 (11%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G P+ A+YN ++ AG + + + +MK G+ P ++ L+S +K GN
Sbjct: 739 MMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGN 798
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ I +M GL T N +++ + +G+ + E+L M + STY
Sbjct: 799 MKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCT 858
Query: 121 LINRY------------GQAGFIDKMEGLF-QLLHSKGLKP--DVVTWTSRIGAYSKKKL 165
+I+ +A ++ + +GL +++ KG P + W S A+SK +
Sbjct: 859 MISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIPCNQTIYWIS--AAFSKPGM 916
Query: 166 YVRCLEIFEEMIDSGCY 182
V +E CY
Sbjct: 917 KVDAERFLKE-----CY 928
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/214 (17%), Positives = 96/214 (44%), Gaps = 7/214 (3%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ P+ +Y ++D +AG A + ++M+ +G+ L++ + G
Sbjct: 425 MEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGR 484
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + + ++ M G+ LD S+++++ + G M+ D+ +YN+
Sbjct: 485 IKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNV 544
Query: 121 LIN---RYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
LI+ ++G+ G + ++ + KG++PD+ T+ + + K+ L+++++M
Sbjct: 545 LISGMLKFGKVG----ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMK 600
Query: 178 DSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
G P + +++ + E+ ++ M
Sbjct: 601 SCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQM 634
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 84/199 (42%), Gaps = 4/199 (2%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G + R YN L+ + G A V DM+ G P + L+ + +V K
Sbjct: 673 GIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKA 732
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ M ++G+ + N+++ G ++++ L+ M++ D TYN LI+
Sbjct: 733 LSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISG 792
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ G + ++ + + GL P T+ I ++ ++ E+ +EM G P+
Sbjct: 793 QAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPN 852
Query: 185 GGTAKVLLAA----CSNED 199
T +++ C++ D
Sbjct: 853 TSTYCTMISGLCKLCTHPD 871
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 74/155 (47%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P+ +Y LVD +AG L+ AE + M + P + ++ +++ + K G + + +
Sbjct: 362 PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSL 421
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
L +M + + F ++++ + G+ E+ M E + + L+N +
Sbjct: 422 LRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKR 481
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSK 162
G I +++GL + + SKG+ D + +TS I + K
Sbjct: 482 IGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFK 516
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 98/245 (40%), Gaps = 48/245 (19%)
Query: 1 MQHMGCEPDRASYNILVDA---YGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSK 57
MQ G D SYN+L+ +G+ G A+ ++ M+ GI P + + +++++ K
Sbjct: 530 MQERGMPWDVVSYNVLISGMLKFGKVG----ADWAYKGMREKGIEPDIATFNIMMNSQRK 585
Query: 58 TGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMEN---GSCEAD 114
G+ + ++M G+K N ++ G L + GKMEE + ++ +
Sbjct: 586 QGDSEGILKLWDKMKSCGIKPSLMSCNIVV---GMLCENGKMEEAIHILNQMMLMEIHPN 642
Query: 115 ISTYNILIN-------------------RYG----------------QAGFIDKMEGLFQ 139
++TY I ++ YG + G K +
Sbjct: 643 LTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMG 702
Query: 140 LLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNED 199
+ ++G PD VT+ S + Y + L + M+++G P+ T ++ S+
Sbjct: 703 DMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAG 762
Query: 200 QTEQV 204
++V
Sbjct: 763 LIKEV 767
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 88/208 (42%), Gaps = 10/208 (4%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVS-KCEDILNQM 71
++ L Y L A M G+ P + L+ F+ G V + I ++M
Sbjct: 61 FHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKM 120
Query: 72 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
G+ D F LN +++ + ++G ++ ++++ N D TYN +I+ + G
Sbjct: 121 IACGVSPDVFALNVLIHSFCKVG---RLSFAISLLRNRVISIDTVTYNTVISGLCEHGLA 177
Query: 132 DKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVL 191
D+ + G+ PD V++ + I + K +VR + +E+ + T +L
Sbjct: 178 DEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLI----THTIL 233
Query: 192 LAACSNEDQTEQV--TTVIRTMDKDIKT 217
L++ N E+ V+ D D+ T
Sbjct: 234 LSSYYNLHAIEEAYRDMVMSGFDPDVVT 261
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/197 (17%), Positives = 91/197 (46%), Gaps = 1/197 (0%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P+ +Y+ +++ Y + G L +A ++ M+ + P ++ ++ K G ++
Sbjct: 397 PNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL 456
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
+M G++ + ++L++++N R+G+ +++ ++ M + D Y LI+ + +
Sbjct: 457 SKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFK 516
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
G + + + +G+ DVV++ I K V ++ M + G PD T
Sbjct: 517 GGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFG-KVGADWAYKGMREKGIEPDIAT 575
Query: 188 AKVLLAACSNEDQTEQV 204
+++ + + +E +
Sbjct: 576 FNIMMNSQRKQGDSEGI 592
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 89/193 (46%), Gaps = 10/193 (5%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDM--KRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQ 70
+N ++ + R+ F A ++F DM + P ++ + A+ + G +
Sbjct: 92 WNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGM 151
Query: 71 MCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGF 130
+ K GL+ D+F+ N+ML++Y G + + G D+ +N +I + + G
Sbjct: 152 VIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFL----GMIGFDVVAWNSMIMGFAKCGL 207
Query: 131 IDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKV 190
ID+ + LF + + + V+W S I + + + L++F EM + PDG T
Sbjct: 208 IDQAQNLFDEMPQR----NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVS 263
Query: 191 LLAACSNEDQTEQ 203
LL AC+ +EQ
Sbjct: 264 LLNACAYLGASEQ 276
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 91/206 (44%), Gaps = 10/206 (4%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDM-KRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
D ++N ++ + + G ++ A+ +F++M +R G+ S ++S F + G D+
Sbjct: 191 DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGV-----SWNSMISGFVRNGRFKDALDM 245
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
+M + +K D F + S+LN LG + + + E + LI+ Y +
Sbjct: 246 FREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCK 305
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
G I++ +F+ K L W S I + R +++F E+ SG PD +
Sbjct: 306 CGCIEEGLNVFECAPKKQLS----CWNSMILGLANNGFEERAMDLFSELERSGLEPDSVS 361
Query: 188 AKVLLAACSNEDQTEQVTTVIRTMDK 213
+L AC++ + + R M +
Sbjct: 362 FIGVLTACAHSGEVHRADEFFRLMKE 387
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 1/206 (0%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
PD+ SY IL+ +Y +G A + M+ G+ T + +LS+ K G + +++
Sbjct: 172 PDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNL 231
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
N+M K G +LD N + + + +++E++ M + + D +YN L+ Y +
Sbjct: 232 WNEMVKKGCELDNAAYNVRI-MSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCE 290
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
G +D+ + +++ L P+ T+ + I +LY + IF++ + PD T
Sbjct: 291 RGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNT 350
Query: 188 AKVLLAACSNEDQTEQVTTVIRTMDK 213
K L+ + + +IRT+ K
Sbjct: 351 LKHLVVGLVENKKRDDAKGLIRTVKK 376
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 92/217 (42%), Gaps = 38/217 (17%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVG-------------------------------- 40
Y+ L+ +YG+A N A FE M + G
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 41 -----ITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQ 95
I P S+ +L+ ++ +G K +I+ QM G+++ T ++L+ + G+
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 96 FGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTS 155
+ + M CE D + YN+ I Q ++++ L + + S GLKPD +++
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRIMS-AQKESPERVKELIEEMSSMGLKPDTISYNY 283
Query: 156 RIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLL 192
+ AY ++ + +++E + + C P+ T + L+
Sbjct: 284 LMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLI 320
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 8/209 (3%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D+ YN+L+ Y +G +DA VF+ M + T S L+S SK V + ++
Sbjct: 270 DQVVYNVLLKLYMESGLFDDARKVFDGMSERNVV-TWNS---LISVLSKKVRVHEMFNLF 325
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
+M + + L ++L R+ +E+ + + D+ N L++ YG+
Sbjct: 326 RKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKC 385
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTA 188
G ++ +F ++ +K D+ +W + Y+ + +FE MI+SG PDG T
Sbjct: 386 GEVEYSRRVFDVMLTK----DLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITF 441
Query: 189 KVLLAACSNEDQTEQVTTVIRTMDKDIKT 217
LL+ CS+ TE ++ M + +
Sbjct: 442 VALLSGCSDTGLTEYGLSLFERMKTEFRV 470
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 99/240 (41%), Gaps = 37/240 (15%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGI-TPTMKSHMVLLSAFSKT--GNVS 62
C ++ + G AG +++A +VF+ ++ +G+ P ++ LL A SK+ +V
Sbjct: 137 CFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVE 196
Query: 63 KCEDILNQMCKSGLKLDTFVLNSMLNLYG------------------------------- 91
E L +M G D F L +L +Y
Sbjct: 197 LVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHISTILVV 256
Query: 92 ---RLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKP 148
+ GQ K E++ ++E + TY +LI+ + + IDK LF+ + G+
Sbjct: 257 SFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNA 316
Query: 149 DVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVI 208
D+ + IG K K L ++ E+ SG PD G LL + S E + ++T VI
Sbjct: 317 DIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVI 376
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 86/179 (48%), Gaps = 10/179 (5%)
Query: 41 ITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKME 100
+ PTM + +L+S + + ++ +L + +SG+ D + ++++ + G+ M
Sbjct: 463 LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMF 522
Query: 101 EVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAY 160
EV M N EA++ T+ LI+ +AG + K G + +L SK +KPD V + + I A
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISAC 582
Query: 161 SKKKLYVRCLEIFEEM------IDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
+ R ++ EM ID PD + L+ AC N Q E+ V + + K
Sbjct: 583 GQSGAVDRAFDVLAEMKAETHPID----PDHISIGALMKACCNAGQVERAKEVYQMIHK 637
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 2/202 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRV--GITPTMKSHMVLLSAFSKT 58
++ +PDR +N L+ A G++G ++ A V +MK I P S L+ A
Sbjct: 563 LRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNA 622
Query: 59 GNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTY 118
G V + +++ + K G++ V +N + G + + M+ D +
Sbjct: 623 GQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFF 682
Query: 119 NILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID 178
+ LI+ G A +D+ G+ Q S+G++ ++++S +GA K + + LE++E++
Sbjct: 683 SALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKS 742
Query: 179 SGCYPDGGTAKVLLAACSNEDQ 200
P T L+ A +Q
Sbjct: 743 IKLRPTISTMNALITALCEGNQ 764
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/211 (18%), Positives = 97/211 (45%), Gaps = 3/211 (1%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P +++N+L+ + + A V ++ G+T K + L+S+ +K+G V ++
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEV 524
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
+QM SG++ + ++++ R GQ K ++ + + + D +N LI+ GQ
Sbjct: 525 FHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQ 584
Query: 128 AGFIDKMEGLFQLLHSK--GLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
+G +D+ + + ++ + PD ++ + + A R E+++ + G
Sbjct: 585 SGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTP 644
Query: 186 GTAKVLLAACSNEDQTEQVTTVIRTM-DKDI 215
+ + +CS + ++ + M +KD+
Sbjct: 645 EVYTIAVNSCSKSGDWDFACSIYKDMKEKDV 675
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 97/192 (50%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G +P+ YN L+ + ++G + +A + +M+ + ++P + ++ +L++
Sbjct: 330 MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQ 389
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V++ + +M + + NS+++ Y + + ++ + M E +I T++
Sbjct: 390 VAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFST 449
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ Y I GL+ + KG+ PDVVT+T+ I A+ K+ L ++ +M+++G
Sbjct: 450 LIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAG 509
Query: 181 CYPDGGTAKVLL 192
+P+ T L+
Sbjct: 510 IHPNDHTFACLV 521
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 94/211 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M +G +P+ Y I + R + +AE +FE MK+ G+ P + ++ ++ + KTGN
Sbjct: 225 MTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGN 284
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V + + ++ + L + V ++++ + + + + M + ++ YN
Sbjct: 285 VRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNC 344
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ + ++G + + GL + S L PDV T+T I + +F++M +
Sbjct: 345 LIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER 404
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+P T L+ E EQ + M
Sbjct: 405 IFPSSATYNSLIHGYCKEYNMEQALDLCSEM 435
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 90/192 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G P+ +Y+ ++D Y + G + A +++++ + P + L+ F K
Sbjct: 260 MKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARE 319
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + M K G+ + +V N +++ + + G + +L+ ME+ + D+ TY I
Sbjct: 320 LVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTI 379
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN + + LFQ + ++ + P T+ S I Y K+ + L++ EM SG
Sbjct: 380 LINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASG 439
Query: 181 CYPDGGTAKVLL 192
P+ T L+
Sbjct: 440 VEPNIITFSTLI 451
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 87/187 (46%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P+ + LVD + +A L A ++F M + G+ P + + L+ K+GN+ + +
Sbjct: 302 PNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGL 361
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
L++M L D F ++N Q + + M+N +TYN LI+ Y +
Sbjct: 362 LSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCK 421
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
+++ L + + G++P+++T+++ I Y + + ++ EM G PD T
Sbjct: 422 EYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVT 481
Query: 188 AKVLLAA 194
L+ A
Sbjct: 482 YTALIDA 488
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 84/183 (45%)
Query: 2 QHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNV 61
+ M C PD + +++ R + ++ M G+ P + + VL K G
Sbjct: 156 REMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLY 215
Query: 62 SKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNIL 121
SK E +L++M G+K + ++ + R + + E++ +M+ ++ TY+ +
Sbjct: 216 SKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAM 275
Query: 122 INRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGC 181
I+ Y + G + + GL++ + L P+VV + + + + K + V +F M+ G
Sbjct: 276 IDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGV 335
Query: 182 YPD 184
P+
Sbjct: 336 DPN 338
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 85/187 (45%), Gaps = 6/187 (3%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G EP+ +++ L+D Y + A ++ +M GI P + ++ L+ A K N
Sbjct: 435 MTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEAN 494
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENG---SCEADIST 117
+ + + + M ++G+ + +++ + + G+ + EN SC +
Sbjct: 495 MKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQ--ENNQQRSCWNHVG- 551
Query: 118 YNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
+ LI Q G+I + F + S G+ PD+ ++ S + + ++K + + +MI
Sbjct: 552 FTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMI 611
Query: 178 DSGCYPD 184
+G P+
Sbjct: 612 KTGILPN 618
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 95/184 (51%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ P+ ++ L+D Y +AG L A +++++M+RV ++ + ++ L+ F K G
Sbjct: 189 MKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGE 248
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + E++ ++M + ++ ++ V ++++ + + G + L M N DI+ Y +
Sbjct: 249 MQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGV 308
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I+ G + + + + + L PD+V +T+ + AY K + ++ ++I+ G
Sbjct: 309 IISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERG 368
Query: 181 CYPD 184
PD
Sbjct: 369 FEPD 372
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 112/243 (46%), Gaps = 30/243 (12%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M + G D +Y +++ G L +A + EDM++ + P M +++A+ K+G
Sbjct: 294 MLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGR 353
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFG---------KMEEVL-TVMENGS 110
+ ++ +++ + G + D L++M++ + GQ K +V+ TV+ +
Sbjct: 354 MKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDAL 413
Query: 111 C-EADISTYNILINRYGQAGFI-DK------MEGL---------FQL---LHSKGLKPDV 150
C E D L ++ +AG + DK + GL F+L + +GL D+
Sbjct: 414 CKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDL 473
Query: 151 VTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRT 210
+ +T+ I + K L V ++F+EM++SG PD +L+ A E + ++
Sbjct: 474 LAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLD 533
Query: 211 MDK 213
M +
Sbjct: 534 MQR 536
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 79/179 (44%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C P+ +Y+ +D + ++G L A F MKR ++P + + L+ + K G++
Sbjct: 159 CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAV 218
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+ +M + + L+ ++++ + + G+ + EE+ + M E + Y +I+ +
Sbjct: 219 SLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGF 278
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
Q G D + ++G++ D+ + I EI E+M S PD
Sbjct: 279 FQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPD 337
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 85/187 (45%), Gaps = 4/187 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVG---ITPTMKSHMVLLSAFSK 57
M GCEPD SYN L+D + R G + A V E ++ P + S L + FSK
Sbjct: 82 MPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSK 141
Query: 58 TGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADIST 117
+ + + M K + ++ ++ + + G+ + M+ + ++ T
Sbjct: 142 MKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVT 200
Query: 118 YNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
+ LI+ Y +AG ++ L++ + + +VVT+T+ I + KK R E++ M+
Sbjct: 201 FTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMV 260
Query: 178 DSGCYPD 184
+ P+
Sbjct: 261 EDRVEPN 267
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 4/175 (2%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G P R+S+N +V + G + AE + M R G P + S+ L+ + G++
Sbjct: 51 GYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSA 110
Query: 65 EDILNQMCKSG---LKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNIL 121
+L + S K D NS+ N + ++ ++ + VM C ++ TY+
Sbjct: 111 SLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK-CCSPNVVTYSTW 169
Query: 122 INRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
I+ + ++G + F + L P+VVT+T I Y K + +++EM
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM 224
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 98/236 (41%), Gaps = 23/236 (9%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G P SYNIL+D + G L+DA+ + MKR G+ P ++ LL + G
Sbjct: 352 MTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGK 411
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V + +L +M ++ + + N +L+ ++G+ + EE+L M D T NI
Sbjct: 412 VDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNI 471
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLK-----------------------PDVVTWTSRI 157
+++ +G +DK + + + G PD++T+++ +
Sbjct: 472 IVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLL 531
Query: 158 GAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
K + +F EM+ PD + + + + V++ M+K
Sbjct: 532 NGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK 587
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 100/252 (39%), Gaps = 39/252 (15%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G P++ YN +V ++ R G +D+E + E M+ G+ P + + +SA K G
Sbjct: 208 MESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGK 267
Query: 61 VSKCEDILNQM-----------------------CKSGLKLDTFVL-------------- 83
V I + M CK GL D L
Sbjct: 268 VLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQ 327
Query: 84 --NSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLL 141
N L R G+F + E VL M + I +YNIL++ + G + + + L+
Sbjct: 328 SYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLM 387
Query: 142 HSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQT 201
G+ PD VT+ + Y + +EM+ + C P+ T +LL + +
Sbjct: 388 KRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRI 447
Query: 202 EQVTTVIRTMDK 213
+ ++R M++
Sbjct: 448 SEAEELLRKMNE 459
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 82/170 (48%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
+P YN+L+++ + + +++DM GI P + +L+ A + V +
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+ ++M + G K + F ++ Y + G K E+L ME+ + YN +++ +
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
+ G D E + + + +GL PD+VT+ SRI A K+ + IF +M
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDM 278
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 92/205 (44%), Gaps = 2/205 (0%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P+ +YN+++ + + G L DA+ +FE ++ +++S+ + L + G + E +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVME-NGSCEADISTYNILINRYG 126
L QM G+ + N +++ +LG + ++ +M+ NG C D TY L++ Y
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVC-PDAVTYGCLLHGYC 407
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGG 186
G +D + L Q + P+ T + + K E+ +M + G D
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTV 467
Query: 187 TAKVLLAACSNEDQTEQVTTVIRTM 211
T +++ + ++ +++ M
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGM 492
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/218 (18%), Positives = 92/218 (42%), Gaps = 4/218 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC+P+ ++ ILV Y +AG + + M+ G+ P + ++S+F + G
Sbjct: 173 MPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGR 232
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVME----NGSCEADIS 116
E ++ +M + GL D NS ++ + G+ + + ME G +
Sbjct: 233 NDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSI 292
Query: 117 TYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
TYN+++ + + G ++ + LF+ + + ++ + + ++ + ++M
Sbjct: 293 TYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQM 352
Query: 177 IDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
D G P + +L+ T++ M ++
Sbjct: 353 TDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRN 390
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 75/172 (43%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C PD +Y+ L++ +AG +A+ +F +M + P ++ + + F K G +S
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAF 579
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+L M K G NS++ G Q ++ ++ M+ +I TYN I
Sbjct: 580 RVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYL 639
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
+ ++ L + K + P+V ++ I A+ K + E+FE +
Sbjct: 640 CEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAV 691
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 88/217 (40%), Gaps = 23/217 (10%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGIT------------------ 42
M G D + NI+VD +G L+ A + + M+ G
Sbjct: 457 MNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLI 516
Query: 43 -----PTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFG 97
P + ++ LL+ K G ++ +++ +M L+ D+ N ++ + + G+
Sbjct: 517 ENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKIS 576
Query: 98 KMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRI 157
VL ME C + TYN LI G I ++ GL + KG+ P++ T+ + I
Sbjct: 577 SAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAI 636
Query: 158 GAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAA 194
+ + + +EM+ P+ + K L+ A
Sbjct: 637 QYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEA 673
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 96/216 (44%), Gaps = 5/216 (2%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G P ++N+L+ A + ++ A +F++M G P + +L+ + K G K
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
++LN M G+ + + N++++ + R G+ E+++ M DI T+N I+
Sbjct: 202 LELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISA 261
Query: 125 YGQAGFIDKMEGLF---QLLHSKGL-KPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+ G + +F +L GL +P+ +T+ + + K L +FE + ++
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREND 321
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM-DKDI 215
+ + L + + TV++ M DK I
Sbjct: 322 DLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGI 357
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 81/157 (51%), Gaps = 2/157 (1%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G +PD A++N L+ + + G + +A FE M V + P++K LLSA S +
Sbjct: 328 GLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNG 387
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
++I + K+ + D FVL S++++Y + G + E D +N++I+
Sbjct: 388 KEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKP--KDPVFWNVMISG 445
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYS 161
YG+ G + +F+LL + ++P + T+T+ + A S
Sbjct: 446 YGKHGECESAIEIFELLREEKVEPSLATFTAVLSACS 482
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 84/187 (44%), Gaps = 4/187 (2%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGIT-PTMKSHMVLLSAFSKTGNVSKCEDILNQ 70
+YN + G +N +VF M++ P + + ++A + N+ +
Sbjct: 197 TYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGL 256
Query: 71 MCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGF 130
+ K + +T V +++++Y + + V T +++ ++ ++N +I+ G
Sbjct: 257 VMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKD---TRNLISWNSVISGMMINGQ 313
Query: 131 IDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKV 190
+ LF+ L S+GLKPD TW S I +S+ + + FE M+ P
Sbjct: 314 HETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTS 373
Query: 191 LLAACSN 197
LL+ACS+
Sbjct: 374 LLSACSD 380
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D +N+++ YG+ G A +FE ++ + P++ + +LSA S GNV K I
Sbjct: 435 DPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIF 494
Query: 69 NQMCKS-GLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVM 106
M + G K T + M++L GR G+ + +EV+ M
Sbjct: 495 RLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 90/213 (42%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ GC P YN+L+D + G L + ++M G P ++ L+ G
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 307
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ K +L +M S + +++N + + +L+ ME + Y++
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSV 367
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ + G ++ L++ + KG KP++V ++ + ++ EI MI SG
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
C P+ T L+ E+ V + MDK
Sbjct: 428 CLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDK 460
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 9/207 (4%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC+P+ Y++LVD R G N+A+ + M G P ++ L+ F KTG
Sbjct: 388 MAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGL 447
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + +M K+G + F + +++ +G+ + V + M + D Y+
Sbjct: 448 CEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSS 507
Query: 121 LINRYGQAGFIDKMEGLFQLLHS------KGLKPDVVTWTSRIGAYSKKKLYVRCLEIFE 174
+I G G I M+ +L H +PDVVT+ + +K R +++
Sbjct: 508 IIK--GLCG-IGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLN 564
Query: 175 EMIDSGCYPDGGTAKVLLAACSNEDQT 201
M+D GC PD T L S + +
Sbjct: 565 SMLDRGCDPDVITCNTFLNTLSEKSNS 591
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 100/217 (46%), Gaps = 4/217 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G ++ Y++L+ + G +A +++ M G P + + VL+ + G
Sbjct: 353 MEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGK 412
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
++ ++ILN+M SG + + +S++ + + G + +V M+ C + Y++
Sbjct: 413 PNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSV 472
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI--- 177
LI+ G + + ++ + + G+KPD V ++S I L+++ EM+
Sbjct: 473 LIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQE 532
Query: 178 DSGCYPDGGTAKVLL-AACSNEDQTEQVTTVIRTMDK 213
+ PD T +LL C +D + V + +D+
Sbjct: 533 EPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDR 569
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 91/209 (43%)
Query: 3 HMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVS 62
+M P+ S+N+++ A + F++ A VF M P ++ L+ K +
Sbjct: 180 NMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERID 239
Query: 63 KCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILI 122
+ +L++M G + N +++ + G ++ +++ M C + TYN LI
Sbjct: 240 EAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLI 299
Query: 123 NRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCY 182
+ G +DK L + + S P+ VT+ + I K++ + + M + G +
Sbjct: 300 HGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYH 359
Query: 183 PDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+ VL++ E + E+ ++ R M
Sbjct: 360 LNQHIYSVLISGLFKEGKAEEAMSLWRKM 388
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
GC P+ +YN L+ G L+ A ++ E M P ++ L++ K +
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA 346
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTV---MENGSCEADISTYNIL 121
+L+ M + G L+ + + +++ L + GK EE +++ M C+ +I Y++L
Sbjct: 347 VRLLSSMEERGYHLNQHIYSVLIS---GLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVL 403
Query: 122 INRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGC 181
++ + G ++ + + + + G P+ T++S + + K L +++++EM +GC
Sbjct: 404 VDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGC 463
Query: 182 YPDGGTAKVLL 192
+ VL+
Sbjct: 464 SRNKFCYSVLI 474
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 87/205 (42%), Gaps = 26/205 (12%)
Query: 11 ASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQ 70
AS L+ G GF+ +A A F MK P + ++ +++A + GN K +L+Q
Sbjct: 166 ASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQ 225
Query: 71 MCKSGLKL--DTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
M G + DT+ +++ Y R G M+ G C I NR
Sbjct: 226 MQLPGFRYPPDTYTYTILISSYCRYG-----------MQTG-CRKAIRRRMWEANR---- 269
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTA 188
+F+ + +G PDVVT+ I K R LE+FE+M GC P+ T
Sbjct: 270 --------MFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTY 321
Query: 189 KVLLAACSNEDQTEQVTTVIRTMDK 213
+ S ++ E ++RTM K
Sbjct: 322 NSFIRYYSVTNEIEGAIEMMRTMKK 346
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 91/215 (42%), Gaps = 20/215 (9%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGI--TPTMKSHMVLLSAFSKT 58
M+ C+PD +YN +++A R G A + + M+ G P ++ +L+S++ +
Sbjct: 191 MKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRY 250
Query: 59 GNVSKCED-----------ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVME 107
G + C + +M G D N +++ + + G+ E+ M+
Sbjct: 251 GMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMK 310
Query: 108 NGSCEADISTYNILINRYGQA----GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKK 163
C + TYN I Y G I+ M + +L H P T+T I A +
Sbjct: 311 TKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHG---VPGSSTYTPLIHALVET 367
Query: 164 KLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNE 198
+ ++ EM+++G P T K++ A S+E
Sbjct: 368 RRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSE 402
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 1/193 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G PD +SY ++V R G + +A+ M + G P + ++L+A + G
Sbjct: 208 MSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGL 267
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V++ +M G K + S+++ + G + E+L M + ++ T+
Sbjct: 268 VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 327
Query: 121 LINRYGQAGFIDKMEGLF-QLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
LI+ + G+ +K LF +L+ S KP+V T+TS IG Y K+ R +F M +
Sbjct: 328 LIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 387
Query: 180 GCYPDGGTAKVLL 192
G +P+ T L+
Sbjct: 388 GLFPNVNTYTTLI 400
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 98/240 (40%), Gaps = 35/240 (14%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
+P+ +Y ++ Y + LN AE +F MK G+ P + ++ L++ K G+ + +
Sbjct: 355 KPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYE 414
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN--- 123
++N M G + + N+ ++ + + + E+L + EAD TY ILI
Sbjct: 415 LMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQC 474
Query: 124 -------------RYGQAGF-------------------IDKMEGLFQLLHSKGLKPDVV 151
R + GF + + E LFQL+ S GL P
Sbjct: 475 KQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKE 534
Query: 152 TWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
T+TS I Y K+ L+ F M GC PD T L++ + ++ + M
Sbjct: 535 TYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 594
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 90/185 (48%), Gaps = 1/185 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G PD A+ +++ A G +N A F M +G P + + L+ K G+
Sbjct: 243 MIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGS 302
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEV-LTVMENGSCEADISTYN 119
+ + ++L +M ++G K + + ++++ + G K + L ++ + + + ++ TY
Sbjct: 303 IKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYT 362
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
+I Y + +++ E LF + +GL P+V T+T+ I + K + R E+ M D
Sbjct: 363 SMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDE 422
Query: 180 GCYPD 184
G P+
Sbjct: 423 GFMPN 427
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 84/184 (45%)
Query: 20 YGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLD 79
+ G LN+A + DM+ G+TP+ + +L + G + E++ ++M G+ D
Sbjct: 157 FSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPD 216
Query: 80 TFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQ 139
+ M+ R G+ + + LT M D +T +++ + G +++ F+
Sbjct: 217 SSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFR 276
Query: 140 LLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNED 199
+ G KP+++ +TS I KK + E+ EEM+ +G P+ T L+
Sbjct: 277 KMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRG 336
Query: 200 QTEQ 203
TE+
Sbjct: 337 WTEK 340
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 94/243 (38%), Gaps = 32/243 (13%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G E D +Y IL+ + +N A A F M + G M+ + +L++AF + + +
Sbjct: 458 GLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 517
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
E + + GL SM++ Y + G + M+ C D TY LI+
Sbjct: 518 ERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISG 577
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSK---------------KKLYVR- 168
+ +D+ L++ + +GL P VT + Y K KKL++R
Sbjct: 578 LCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRT 637
Query: 169 --------CLE--------IFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMD 212
C E F+++++ D T ACS + VT + +
Sbjct: 638 VRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVTDLTERIS 697
Query: 213 KDI 215
+ +
Sbjct: 698 RGV 700
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 95/188 (50%), Gaps = 8/188 (4%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D S+N L++ Y + G A V++ M+ G+ P + + L+S+ S G++++ ++
Sbjct: 221 DLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
+ ++GL++ ++N++++++ + G + + +E + I ++ +I+ Y +
Sbjct: 281 EYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRT----IVSWTTMISGYARC 336
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTA 188
G +D LF + K DVV W + IG + K L +F+EM S PD T
Sbjct: 337 GLLDVSRKLFDDMEEK----DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITM 392
Query: 189 KVLLAACS 196
L+ACS
Sbjct: 393 IHCLSACS 400
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 83/184 (45%), Gaps = 8/184 (4%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM 71
S+ ++ Y R G L+ + +F+DM+ + + + M+ S +K G + + +M
Sbjct: 325 SWTTMISGYARCGLLDVSRKLFDDMEEKDVV--LWNAMIGGSVQAKRGQDALA--LFQEM 380
Query: 72 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
S K D + L+ +LG + +E S +++ L++ Y + G I
Sbjct: 381 QTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNI 440
Query: 132 DKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVL 191
+ +F + ++ + +T+T+ IG + + F EMID+G PD T L
Sbjct: 441 SEALSVFHGIQTR----NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGL 496
Query: 192 LAAC 195
L+AC
Sbjct: 497 LSAC 500
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 81/176 (46%), Gaps = 7/176 (3%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNV---SKC 64
P+ S+N+ + + + ++ +++ M R G + H F ++ S
Sbjct: 116 PNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLG 175
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
IL + K L+L + V N+ ++++ G ME V + D+ ++N LIN
Sbjct: 176 HMILGHVLKLRLELVSHVHNASIHMFASCGD---MENARKVFDESPVR-DLVSWNCLING 231
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
Y + G +K +++L+ S+G+KPD VT + + S R E +E + ++G
Sbjct: 232 YKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENG 287
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 94/211 (44%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G + D S+NI + ++ G L+ A +M++ G+TP + ++ L+SA K
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ N M G K + N + + ++L +M E D TYN++I
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKG 291
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ A F D E ++ +H KG KP++ + + I K + + ++ + YP+
Sbjct: 292 FFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPN 351
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTMDKDI 215
T ++LL + Q +Q +++ + + +
Sbjct: 352 LDTVEMLLKGLVKKGQLDQAKSIMELVHRRV 382
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 98/213 (46%), Gaps = 2/213 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDM-KRVGITPTMKSHMVLLSAFSKTG 59
M GC PD+ SY ++ + + + + + M K G+ P ++ L+ +K
Sbjct: 338 MHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHD 397
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVM-ENGSCEADISTY 118
+ + L + G ++D +++++ + G+ + ++++ M G C D+ TY
Sbjct: 398 HADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTY 457
Query: 119 NILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID 178
++N + + G +DK + L Q++H+ G KP+ V++T+ + + + E+ +
Sbjct: 458 TAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEE 517
Query: 179 SGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
P+ T V++ E + + V+R M
Sbjct: 518 HWWSPNSITYSVIMHGLRREGKLSEACDVVREM 550
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 92/196 (46%), Gaps = 1/196 (0%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D Y +++ + + V MKR GI T ++ ++ ++S+ G + +L
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
M ++G++ + + N+ ++++ R + K L M+ ++ TYN +I Y
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI-DSGCYPDGGT 187
+++ L + +HSKG PD V++ + +G K+K V ++ ++M + G PD T
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385
Query: 188 AKVLLAACSNEDQTEQ 203
L+ + D ++
Sbjct: 386 YNTLIHMLTKHDHADE 401
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 88/200 (44%), Gaps = 1/200 (0%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G PD+ +YN L+ + ++A +D + G + ++ A K G +S+
Sbjct: 378 GLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEA 437
Query: 65 EDILNQMCKSG-LKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN 123
+D++N+M G D +++N + RLG+ K +++L VM + + +Y L+N
Sbjct: 438 KDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLN 497
Query: 124 RYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYP 183
+ G + + + P+ +T++ + ++ ++ EM+ G +P
Sbjct: 498 GMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFP 557
Query: 184 DGGTAKVLLAACSNEDQTEQ 203
+LL + + +T +
Sbjct: 558 GPVEINLLLQSLCRDGRTHE 577
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 72/164 (43%)
Query: 51 LLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGS 110
+L SKT +L M + G+ + ++ Y R GQ +VLT+M+
Sbjct: 213 MLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAG 272
Query: 111 CEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCL 170
E ++ N I+ + +A ++K + + G+ P+VVT+ I Y +
Sbjct: 273 VEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAI 332
Query: 171 EIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
E+ E+M GC PD + ++ E + +V +++ M K+
Sbjct: 333 ELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKE 376
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 75/170 (44%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P+ +Y++++ R G L++A V +M G P +LL + + G +
Sbjct: 522 PNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKF 581
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
+ + G ++ ++++ + + + VL M + AD+ TY L++ G+
Sbjct: 582 MEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGK 641
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
G I + L + + KG+ P VT+ + I Y + + I E+MI
Sbjct: 642 KGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMI 691
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/211 (17%), Positives = 86/211 (40%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G +P+ SY L++ R G +A + + +P ++ V++ + G
Sbjct: 480 MHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGK 539
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+S+ D++ +M G +N +L R G+ + + + N C ++ +
Sbjct: 540 LSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTT 599
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I+ + Q +D + ++ DV T+T+ + KK E+ ++M+ G
Sbjct: 600 VIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKG 659
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
P T + ++ + + + ++ M
Sbjct: 660 IDPTPVTYRTVIHRYCQMGKVDDLVAILEKM 690
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 99/206 (48%), Gaps = 2/206 (0%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P+ ++NI + + +A + +A ++MK G P + S+ ++ + + K ++
Sbjct: 222 PNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEM 281
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
L++M +G ++ ++++ +F + V T M+ C+ D YN LI+ +
Sbjct: 282 LSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLAR 341
Query: 128 AGFIDKMEGLFQL-LHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG-CYPDG 185
AG +++ E +F++ + G+ + T+ S I Y + +E+ +EM S C PD
Sbjct: 342 AGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDV 401
Query: 186 GTAKVLLAACSNEDQTEQVTTVIRTM 211
T + LL +C +V +++ M
Sbjct: 402 HTYQPLLRSCFKRGDVVEVGKLLKEM 427
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 7/216 (3%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G P+ +Y ++ + +A V MKR G P + L+ ++ G
Sbjct: 285 MEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGR 344
Query: 61 VSKCEDILN-QMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGS-CEADISTY 118
+ + E + +M + G+ ++T NSM+ +Y + K E+L ME+ + C D+ TY
Sbjct: 345 LEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTY 404
Query: 119 NILINRYGQAGFIDKMEGLFQLLHSKG-LKPDVVTWTSRIGAYSKKKL--YVRCLEIFEE 175
L+ + G + ++ L + + +K L D T+T I + + + CL FEE
Sbjct: 405 QPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCL--FEE 462
Query: 176 MIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
MI P T +LL ++ E + M
Sbjct: 463 MISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIM 498
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 99/206 (48%), Gaps = 2/206 (0%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P+ ++NI + + +A + +A ++MK G P + S+ ++ + + K ++
Sbjct: 222 PNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEM 281
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
L++M +G ++ ++++ +F + V T M+ C+ D YN LI+ +
Sbjct: 282 LSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLAR 341
Query: 128 AGFIDKMEGLFQL-LHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG-CYPDG 185
AG +++ E +F++ + G+ + T+ S I Y + +E+ +EM S C PD
Sbjct: 342 AGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDV 401
Query: 186 GTAKVLLAACSNEDQTEQVTTVIRTM 211
T + LL +C +V +++ M
Sbjct: 402 HTYQPLLRSCFKRGDVVEVGKLLKEM 427
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 7/216 (3%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G P+ +Y ++ + +A V MKR G P + L+ ++ G
Sbjct: 285 MEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGR 344
Query: 61 VSKCEDILN-QMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGS-CEADISTY 118
+ + E + +M + G+ ++T NSM+ +Y + K E+L ME+ + C D+ TY
Sbjct: 345 LEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTY 404
Query: 119 NILINRYGQAGFIDKMEGLFQLLHSKG-LKPDVVTWTSRIGAYSKKKL--YVRCLEIFEE 175
L+ + G + ++ L + + +K L D T+T I + + + CL FEE
Sbjct: 405 QPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCL--FEE 462
Query: 176 MIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
MI P T +LL ++ E + M
Sbjct: 463 MISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIM 498
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 4/174 (2%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM 71
S+N L+ + R A +F+ M R G P+ S+ L A S TG + + + + M
Sbjct: 229 SWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 288
Query: 72 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
KSG KL F N++L++Y + G ++ + + D+ ++N L+ Y Q GF
Sbjct: 289 IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL----AKRDVVSWNSLLTAYAQHGFG 344
Query: 132 DKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
+ F+ + G++P+ +++ S + A S L +E M G P+
Sbjct: 345 KEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEA 398
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D S+N L+ AY + GF +A FE+M+RVGI P S + +L+A S +G + +
Sbjct: 327 DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYY 386
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN 123
M K G+ + + ++++L GR G + L +E E + + L+N
Sbjct: 387 ELMKKDGIVPEAWHYVTVVDLLGRAGDLNR---ALRFIEEMPIEPTAAIWKALLN 438
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 81/203 (39%), Gaps = 17/203 (8%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G P SY L A GFL + V M + G + LL ++K+G++
Sbjct: 257 GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDA 316
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGK-----MEEVLTVMENGSCEADISTYN 119
I +++ K D NS+L Y + G FGK EE+ V G +IS +
Sbjct: 317 RKIFDRLAKR----DVVSWNSLLTAYAQHG-FGKEAVWWFEEMRRV---GIRPNEISFLS 368
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
+L +G +D+ ++L+ G+ P+ + + + + R L EEM
Sbjct: 369 VL-TACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEM--- 424
Query: 180 GCYPDGGTAKVLLAACSNEDQTE 202
P K LL AC TE
Sbjct: 425 PIEPTAAIWKALLNACRMHKNTE 447
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 79/179 (44%), Gaps = 35/179 (19%)
Query: 14 NILVDAYGRAGFLNDAEAVFE-------------------------------DMKRVGIT 42
N L+D Y R GF++ A VF+ DM +GI
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 285
Query: 43 PTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEV 102
PT + +LSA K ++ E + + K G DT+V N++++LY LG E +
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 345
Query: 103 LTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYS 161
+ M + D TYN LIN Q G+ +K LF+ +H GL+PD T S + A S
Sbjct: 346 FSNMS----QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACS 400
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 8/193 (4%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G D N LV Y R G + ++ FE + G + L+S F ++GN +
Sbjct: 621 GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE-AGDNIAWNA---LVSGFQQSGNNEEA 676
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ +M + G+ + F S + + ++V V+ +++ N LI+
Sbjct: 677 LRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISM 736
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
Y + G I E F + +K + V+W + I AYSK L+ F++MI S P+
Sbjct: 737 YAKCGSISDAEKQFLEVSTK----NEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPN 792
Query: 185 GGTAKVLLAACSN 197
T +L+ACS+
Sbjct: 793 HVTLVGVLSACSH 805
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 74/147 (50%), Gaps = 4/147 (2%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 72
+N+++ AYG L ++ +F M+ I P ++ +L + G++ E I +Q+
Sbjct: 458 WNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 517
Query: 73 KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFID 132
K+ +L+ +V + ++++Y +LG+ ++L D+ ++ +I Y Q F D
Sbjct: 518 KTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG----KDVVSWTTMIAGYTQYNFDD 573
Query: 133 KMEGLFQLLHSKGLKPDVVTWTSRIGA 159
K F+ + +G++ D V T+ + A
Sbjct: 574 KALTTFRQMLDRGIRSDEVGLTNAVSA 600
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 85/169 (50%), Gaps = 6/169 (3%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D ++N LV + ++G +A VF M R GI + + A S+T N+ + + +
Sbjct: 656 DNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVH 715
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
+ K+G +T V N+++++Y + G E+ + S + ++S +N +IN Y +
Sbjct: 716 AVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEV---STKNEVS-WNAIINAYSKH 771
Query: 129 GF-IDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
GF + ++ Q++HS ++P+ VT + A S L + + FE M
Sbjct: 772 GFGSEALDSFDQMIHS-NVRPNHVTLVGVLSACSHIGLVDKGIAYFESM 819
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 97/204 (47%), Gaps = 9/204 (4%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
+P +N ++ + + + +V+ M R G+ P ++ L+ + S+ N
Sbjct: 70 DPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGS 129
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+ + KSGL+ D F+ N+++++YG ++ M + ++ T+N +++ Y
Sbjct: 130 LHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPH----KNLVTWNSILDAYA 185
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGG 186
++G + +F + + DVVTW+S I Y K+ Y + LEIF++M+ G
Sbjct: 186 KSGDVVSARLVFDEMSER----DVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANE 241
Query: 187 TAKV-LLAACSNEDQTEQVTTVIR 209
V ++ AC++ + TV R
Sbjct: 242 VTMVSVICACAHLGALNRGKTVHR 265
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 81/179 (45%), Gaps = 5/179 (2%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMV-LLSAFSKTGNVSKCE 65
E D +++ ++D Y + G N A +F+ M R+G + + MV ++ A + G +++ +
Sbjct: 202 ERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGK 261
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSC-EADISTYNILINR 124
+ + L L + S++++Y + G G + +V S E D +N +I
Sbjct: 262 TVHRYILDVHLPLTVILQTSLIDMYAKCGSIG---DAWSVFYRASVKETDALMWNAIIGG 318
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYP 183
GFI + LF + + PD +T+ + A S L F+ + +SG P
Sbjct: 319 LASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEP 377
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 90/201 (44%), Gaps = 7/201 (3%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM 71
++N ++DAY ++G + A VF++M + T S ++ + K G +K +I +QM
Sbjct: 176 TWNSILDAYAKSGDVVSARLVFDEMSERDVV-TWSS---MIDGYVKRGEYNKALEIFDQM 231
Query: 72 CKSGL-KLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGF 130
+ G K + + S++ LG + + V + + + LI+ Y + G
Sbjct: 232 MRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGS 291
Query: 131 IDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKV 190
I +F K + D + W + IG + L++F +M +S PD T
Sbjct: 292 IGDAWSVFYRASVK--ETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLC 349
Query: 191 LLAACSNEDQTEQVTTVIRTM 211
LLAACS+ ++ +++
Sbjct: 350 LLAACSHGGLVKEAWHFFKSL 370
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 99/196 (50%)
Query: 16 LVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSG 75
+V+ + + +A V+E + ++ + ++A+ + +K E + ++M K G
Sbjct: 359 IVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKG 418
Query: 76 LKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKME 135
++++++YG+ + ++ M+ C+ +I YN LI+ +G+A + + E
Sbjct: 419 FDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAE 478
Query: 136 GLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAAC 195
+++ + + PD V++TS I AY++ K RC+E+++E + D A +++
Sbjct: 479 KIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVF 538
Query: 196 SNEDQTEQVTTVIRTM 211
S + +++ +++ M
Sbjct: 539 SKTSRIDELMRLLQDM 554
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 93/207 (44%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
CE + +Y I ++AY R N AE +F++M + G + ++ ++ + KT +S
Sbjct: 384 CEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAV 443
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
++ +M + G K + ++ NS+++++GR + E++ M+ D +Y +I+ Y
Sbjct: 444 RLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAY 503
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
++ +++ L+Q K D +G +SK + + ++M G D
Sbjct: 504 NRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDA 563
Query: 186 GTAKVLLAACSNEDQTEQVTTVIRTMD 212
L A + Q+ + + D
Sbjct: 564 RLYSSALNALRDAGLNSQIRWLQESFD 590
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 71/137 (51%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ GC+P+ YN L+D +GRA L AE ++++MKR + P S+ ++SA++++
Sbjct: 449 MKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKE 508
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ +C ++ + + K+D + M+ ++ + + ++ +L M+ D Y+
Sbjct: 509 LERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSS 568
Query: 121 LINRYGQAGFIDKMEGL 137
+N AG ++ L
Sbjct: 569 ALNALRDAGLNSQIRWL 585
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 4/186 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDM--KRVGITPTMKSHMVLLSAFSKT 58
M+ G Y++L+ A+ A + E +F++ K++ P M +VL+ + +
Sbjct: 274 MKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLM--YVRE 331
Query: 59 GNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTY 118
GN+ +++ M K+ LK+ +L +++N + + F + +V CEA TY
Sbjct: 332 GNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTY 391
Query: 119 NILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID 178
I IN Y + +K E LF + KG VV +++ + Y K + + + +M
Sbjct: 392 AIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQ 451
Query: 179 SGCYPD 184
GC P+
Sbjct: 452 RGCKPN 457
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 91/192 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G R +Y ++D + GFL++A + +M + GI P + ++ L++ F K G
Sbjct: 434 MKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR 493
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
++I+ ++ + GL + + ++++ R+G + + M D T+N+
Sbjct: 494 FKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNV 553
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L+ +AG + + E + + S G+ P+ V++ I Y ++ +F+EM G
Sbjct: 554 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 613
Query: 181 CYPDGGTAKVLL 192
+P T LL
Sbjct: 614 HHPTFFTYGSLL 625
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 86/206 (41%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C + + Y+IL+ Y R G + D+ +F M G P++ + +L + K+G
Sbjct: 159 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 218
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
L +M K + D N ++N+ G F K ++ ME I TYN +++ Y
Sbjct: 219 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 278
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
+ G L + SKG+ DV T+ I + + + +M +P+
Sbjct: 279 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 338
Query: 186 GTAKVLLAACSNEDQTEQVTTVIRTM 211
T L+ SNE + + ++ M
Sbjct: 339 VTYNTLINGFSNEGKVLIASQLLNEM 364
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 1/193 (0%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
PD A++NIL++ G + + + M++ G PT+ ++ +L + K G ++
Sbjct: 231 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 290
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
L+ M G+ D N +++ R + K +L M + TYN LIN +
Sbjct: 291 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSN 350
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
G + L + S GL P+ VT+ + I + + + L++F M G P +
Sbjct: 351 EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 410
Query: 188 AKVLL-AACSNED 199
VLL C N +
Sbjct: 411 YGVLLDGLCKNAE 423
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 90/214 (42%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G P+ ++N L+D + G +A +F M+ G+TP+ S+ VLL K
Sbjct: 364 MLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAE 423
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+M ++G+ + M++ + G + +L M + DI TY+
Sbjct: 424 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSA 483
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN + + G + + ++ GL P+ + +++ I + + I+E MI G
Sbjct: 484 LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 543
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
D T VL+ + + + +R M D
Sbjct: 544 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 577
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%)
Query: 4 MGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSK 63
+G P+ Y+ L+ R G L +A ++E M G T + VL+++ K G V++
Sbjct: 507 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 566
Query: 64 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN 123
E+ + M G+ +T + ++N YG G+ K V M TY L+
Sbjct: 567 AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 626
Query: 124 RYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYP 183
+ G + + E + LH+ D V + + + A K + + +F EM+ P
Sbjct: 627 GLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 686
Query: 184 DGGTAKVLLAACSNEDQT 201
D T L++ + +T
Sbjct: 687 DSYTYTSLISGLCRKGKT 704
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 93/231 (40%), Gaps = 37/231 (16%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G + D +YN+L+ R+ + + DM++ I P ++ L++ FS G
Sbjct: 294 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 353
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVME------------- 107
V +LN+M GL + N++++ + G F + ++ +ME
Sbjct: 354 VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGV 413
Query: 108 -----------------------NGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSK 144
NG C I TY +I+ + GF+D+ L +
Sbjct: 414 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRI-TYTGMIDGLCKNGFLDEAVVLLNEMSKD 472
Query: 145 GLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAAC 195
G+ PD+VT+++ I + K + EI + G P+G L+ C
Sbjct: 473 GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 523
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 86/211 (40%), Gaps = 13/211 (6%)
Query: 8 PDRASYNILVDAYGRAG-------FLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
PD +Y L+ R G F +AEA R + P + + K G
Sbjct: 686 PDSYTYTSLISGLCRKGKTVIAILFAKEAEA------RGNVLPNKVMYTCFVDGMFKAGQ 739
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
QM G D N+M++ Y R+G+ K ++L M N + +++TYNI
Sbjct: 740 WKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNI 799
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L++ Y + + L++ + G+ PD +T S + + + L+I + I G
Sbjct: 800 LLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRG 859
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
D T +L++ C + +++ M
Sbjct: 860 VEVDRYTFNMLISKCCANGEINWAFDLVKVM 890
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 105/269 (39%), Gaps = 71/269 (26%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPT-------------------- 44
G P+ S++ L++ YG +G A +VF++M +VG PT
Sbjct: 578 GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 637
Query: 45 ---MKS-HMV-----------LLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNL 89
+KS H V LL+A K+GN++K + +M + + D++ S+++
Sbjct: 638 EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 697
Query: 90 YGRLGQ------FGKMEE----VLT--------------------------VMENGSCEA 113
R G+ F K E VL M+N
Sbjct: 698 LCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTP 757
Query: 114 DISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIF 173
DI T N +I+ Y + G I+K L + ++ P++ T+ + YSK+K ++
Sbjct: 758 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 817
Query: 174 EEMIDSGCYPDGGTAKVLLAACSNEDQTE 202
+I +G PD T L+ + E
Sbjct: 818 RSIILNGILPDKLTCHSLVLGICESNMLE 846
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M ++G PD + N ++D Y R G + + +M P + ++ +LL +SK +
Sbjct: 750 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 809
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLG--QFGKMEEVLTVMENGSC---EADI 115
VS + + +G+ D +S++ LG + +E L +++ C E D
Sbjct: 810 VSTSFLLYRSIILNGILPDKLTCHSLV-----LGICESNMLEIGLKILKAFICRGVEVDR 864
Query: 116 STYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEE 175
T+N+LI++ G I+ L +++ S G+ D T + + ++ + + E
Sbjct: 865 YTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHE 924
Query: 176 MIDSGCYPD 184
M G P+
Sbjct: 925 MSKQGISPE 933
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 71/153 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G P +YN ++ Y + G A + + MK G+ + ++ +L+ ++
Sbjct: 259 MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNR 318
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
++K +L M K + + N+++N + G+ ++L M + + T+N
Sbjct: 319 IAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNA 378
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTW 153
LI+ + G + +F ++ +KGL P V++
Sbjct: 379 LIDGHISEGNFKEALKMFYMMEAKGLTPSEVSY 411
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 94/212 (44%), Gaps = 5/212 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G D ++ ++ G A +F M G+ P + M +SA S
Sbjct: 308 METFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKV 367
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+++ ++ + K G D V NS++++Y + G+ +V ++N D+ T+N
Sbjct: 368 INQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKN----KDVYTWNS 423
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I Y QAG+ K LF + L+P+++TW + I Y K +++F+ M G
Sbjct: 424 MITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDG 483
Query: 181 -CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+ T +++A + ++ + R M
Sbjct: 484 KVQRNTATWNLIIAGYIQNGKKDEALELFRKM 515
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 4/192 (2%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G PD + ++ G + + + + ++G++ ++ +L+ ++K G +
Sbjct: 176 GVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGEL--- 232
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
D + + + D NS+L Y + G+ + E++ ME + T+NILI
Sbjct: 233 -DFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGG 291
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
Y Q G D L Q + + G+ DV TWT+ I + + L++F +M +G P+
Sbjct: 292 YNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPN 351
Query: 185 GGTAKVLLAACS 196
T ++ACS
Sbjct: 352 AVTIMSAVSACS 363
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 88/195 (45%), Gaps = 5/195 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVG-ITPTMKSHMVLLSAFSKTG 59
MQ P+ ++N ++ Y + G +A +F+ M++ G + + ++++ + + G
Sbjct: 444 MQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNG 503
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
+ ++ +M S ++ + S+L L + E+ + + +A + N
Sbjct: 504 KKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKN 563
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
L + Y ++G I+ +F + +K D++TW S IG Y Y L +F +M
Sbjct: 564 ALTDTYAKSGDIEYSRTIFLGMETK----DIITWNSLIGGYVLHGSYGPALALFNQMKTQ 619
Query: 180 GCYPDGGTAKVLLAA 194
G P+ GT ++ A
Sbjct: 620 GITPNRGTLSSIILA 634
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 93/210 (44%), Gaps = 1/210 (0%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G + D + N L+DA + + A VF + I P ++ +L+ F K
Sbjct: 234 GVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT-IKPDARTFNILIHGFCKARKFDDA 292
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+++ M + D S + Y + G F ++ E+L M C ++ TY I+++
Sbjct: 293 RAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHS 352
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
G++ + + G+++ + G PD ++S I SK + EIFE+M + G D
Sbjct: 353 LGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRD 412
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
+++A + + E +++ M+ +
Sbjct: 413 VLVYNTMISAALHHSRDEMALRLLKRMEDE 442
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 5/206 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ GC P+ +Y I++ + G++ + +A V+E MK G P K + L+ SKTG
Sbjct: 334 MRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGR 393
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMEN---GSCEADIST 117
+I M G++ D V N+M++ + +L ME+ SC ++ T
Sbjct: 394 FKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVET 453
Query: 118 YNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRI-GAYSKKKLYVRCLEIFEEM 176
Y L+ + + L + + DV T+ I G K+ CL FEE
Sbjct: 454 YAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACL-FFEEA 512
Query: 177 IDSGCYPDGGTAKVLLAACSNEDQTE 202
+ G P T K+L+ ++ E
Sbjct: 513 VRKGMVPRDSTCKMLVDELEKKNMAE 538
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 82/163 (50%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
+Q + PD +Y I+V+ + + A A+ + M+ +G+ PT+ + ++ + K G
Sbjct: 538 IQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGR 597
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V + E+ +M +SG++ D M+N Y R G+ + E++ + TY +
Sbjct: 598 VVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTV 657
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKK 163
LI+ + + G ++K + GL P+VV +T+ IG + KK
Sbjct: 658 LISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKK 700
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 87/184 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M ++GC P SYN ++ + + D ++ ++ + P + +++++++ K +
Sbjct: 503 MVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKND 562
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
I++ M + GL+ + +S++ G+ G+ + EE M + D Y I
Sbjct: 563 RDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMI 622
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+IN Y + G ID+ L + + L+P T+T I + K + + + ++M++ G
Sbjct: 623 MINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDG 682
Query: 181 CYPD 184
P+
Sbjct: 683 LSPN 686
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 88/181 (48%), Gaps = 1/181 (0%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 72
Y L + + G +AEA+F+ M+ G + L+ + K N++ + +M
Sbjct: 240 YKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMV 299
Query: 73 KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFID 132
+ +LD + N++++ + +LG K + + M ++++ TY+I+I Y + G +D
Sbjct: 300 ERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVD 359
Query: 133 KMEGLF-QLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVL 191
LF S+ + +V +T+ I + KK + +++ M+D+G PD T VL
Sbjct: 360 YALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVL 419
Query: 192 L 192
L
Sbjct: 420 L 420
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 53/96 (55%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G +PD +Y I+++ Y R G +++A + E++ + + P+ ++ VL+S F K G
Sbjct: 608 MLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGM 667
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQF 96
+ K L++M + GL + + +++ + + G F
Sbjct: 668 MEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDF 703
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 93/194 (47%), Gaps = 10/194 (5%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMK-RVGITPTMKSHMVLLSAFSKTGNVSK 63
G D A+ L+ Y +G LNDA +F+++ R +T T L S ++ +G +
Sbjct: 141 GFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWT-----ALFSGYTTSGRHRE 195
Query: 64 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN 123
D+ +M + G+K D++ + +L+ +G E ++ ME + + L+N
Sbjct: 196 AIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVN 255
Query: 124 RYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYP 183
Y + G ++K +F + ++ D+VTW++ I Y+ +E+F +M+ P
Sbjct: 256 LYAKCGKMEKARSVFDSM----VEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKP 311
Query: 184 DGGTAKVLLAACSN 197
D + L++C++
Sbjct: 312 DQFSIVGFLSSCAS 325
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 93/256 (36%), Gaps = 72/256 (28%)
Query: 8 PDRA--SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
PDR+ ++ L Y +G +A +F+ M +G+ P + +LSA G++ E
Sbjct: 173 PDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGE 232
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
I+ M + ++ ++FV +++NLY + G+ K V M E DI T++ +I Y
Sbjct: 233 WIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSM----VEKDIVTWSTMIQGY 288
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVT------------------W-------------- 153
F + LF + + LKPD + W
Sbjct: 289 ASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNL 348
Query: 154 ---TSRIGAYSKKKLYVRCLEIFEEMIDS------------------------------- 179
+ I Y+K R E+F+EM +
Sbjct: 349 FMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKL 408
Query: 180 GCYPDGGTAKVLLAAC 195
G PDG T LL C
Sbjct: 409 GISPDGSTFLGLLCGC 424
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 96/211 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G + + + +N ++D ++ + DA+ VF+ MK+ P +KS+ +LL + + N
Sbjct: 188 MEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELN 247
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + +++ +M G + D ++N + + ++ + ME +C+ +
Sbjct: 248 LLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCS 307
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LIN G ++ F+ S G + T+ + +GAY + + +EM G
Sbjct: 308 LINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKG 367
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
P+ T ++L ++++ V +TM
Sbjct: 368 VGPNARTYDIILHHLIRMQRSKEAYEVYQTM 398
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 3/217 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ C+P + L++ G LNDA FE K G ++ L+ A+ +
Sbjct: 293 MEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQR 352
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ +++M G+ + + +L+ R+ + + EV M SCE +STY I
Sbjct: 353 MEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEI 409
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
++ + +D ++ + KG+ P + ++S I A + E F EM+D G
Sbjct: 410 MVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVG 469
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKDIKT 217
P G L +E + ++VT ++ MD+ KT
Sbjct: 470 IRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDRLRKT 506
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 87/179 (48%), Gaps = 1/179 (0%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G + ++YN L+++ G+ ++ +DMK + + ++ ++ +++ V +
Sbjct: 123 GFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLL-SKETFALISRRYARARKVKEA 181
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
++M + G K+++ N ML+ + G ++V M+ E DI +Y IL+
Sbjct: 182 IGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEG 241
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYP 183
+GQ + +++ + + + +G +PDVV + I A+ K K Y + F EM C P
Sbjct: 242 WGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKP 300
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 83/199 (41%), Gaps = 1/199 (0%)
Query: 10 RASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILN 69
+ ++ ++ Y RA + +A F M+ G +L SK+ NV + + +
Sbjct: 162 KETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFD 221
Query: 70 QMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAG 129
+M K + D +L +G+ +++EV M++ E D+ Y I+IN + +A
Sbjct: 222 KMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAK 281
Query: 130 FIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAK 189
++ F + + KP + S I +K LE FE SG + T
Sbjct: 282 KYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYN 341
Query: 190 VLLAA-CSNEDQTEQVTTV 207
L+ A C ++ + TV
Sbjct: 342 ALVGAYCWSQRMEDAYKTV 360
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 91/207 (43%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G PD +YNI++ A R G + + ++M + G +P + ++ +LL +
Sbjct: 252 GFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAA 311
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
++LN M + G++ ++++ R G+ + + C D+ Y ++I
Sbjct: 312 LNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITG 371
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
Y G ++K E +F+ + KG P+V T+ S I + + + +EM GC P+
Sbjct: 372 YISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPN 431
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTM 211
L+ N + + V++ M
Sbjct: 432 FVVYSTLVNNLKNAGKVLEAHEVVKDM 458
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ +G EP + L+D RAG L + ++ +VG TP + + V+++ + G
Sbjct: 318 MREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGE 377
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ K E++ +M + G + F NSM+ + G+F + +L ME+ C + Y+
Sbjct: 378 LEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYST 437
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVR 168
L+N AG ++L + + D+V + SK K Y R
Sbjct: 438 LVNNLKNAG---------KVLEAHEVVKDMVEKGHYVHLISKLKKYRR 476
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 76/178 (42%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G PD +YNIL+ A + M+ VG+ P + L+ S+ G + C
Sbjct: 287 GFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEAC 346
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ +++ K G D M+ Y G+ K EE+ M ++ TYN +I
Sbjct: 347 KYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRG 406
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCY 182
+ AG + L + + S+G P+ V +++ + + E+ ++M++ G Y
Sbjct: 407 FCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHY 464
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 78/200 (39%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM 71
++N+L+ G AG D F K P S+ +L + + + QM
Sbjct: 189 TFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQM 248
Query: 72 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
+ G D N ++ RLG+ ++ +L M D+ TYNIL++
Sbjct: 249 LEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKP 308
Query: 132 DKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVL 191
L + G++P V+ +T+ I S+ C +E + GC PD V+
Sbjct: 309 LAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVM 368
Query: 192 LAACSNEDQTEQVTTVIRTM 211
+ + + E+ + + M
Sbjct: 369 ITGYISGGELEKAEEMFKEM 388
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 86/205 (41%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P + SYN ++ + + V+E M G TP + ++ +++ A + G + +
Sbjct: 220 PYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRL 279
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
L++M K G D + N +L+ + +L M E + + LI+ +
Sbjct: 280 LDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSR 339
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
AG ++ + G PDVV +T I Y + E+F+EM + G P+ T
Sbjct: 340 AGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFT 399
Query: 188 AKVLLAACSNEDQTEQVTTVIRTMD 212
++ + ++ +++ M+
Sbjct: 400 YNSMIRGFCMAGKFKEACALLKEME 424
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 15/204 (7%)
Query: 24 GFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVL 83
G+L A V + M + P ++ AF K NV + + + + M + GL D F
Sbjct: 570 GYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTY 629
Query: 84 NSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY--------------GQAG 129
M++ Y RL + K E + M+ + D+ TY +L++RY G+ G
Sbjct: 630 TIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVG 689
Query: 130 FIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAK 189
K + + + G+ DVV +T I K + E+F+ MIDSG PD
Sbjct: 690 -KRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYT 748
Query: 190 VLLAACSNEDQTEQVTTVIRTMDK 213
L+++ + + T++ + K
Sbjct: 749 TLISSYFRKGYIDMAVTLVTELSK 772
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G PD +Y I++ Y R L AE++FEDMK+ GI P + ++ VLL +
Sbjct: 617 MVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRY----- 671
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
LKLD + ++ G +G+ K EVL D+ Y +
Sbjct: 672 ---------------LKLDP-EHHETCSVQGEVGK-RKASEVLREFSAAGIGLDVVCYTV 714
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKK 163
LI+R + +++ LF + GL+PD+V +T+ I +Y +K
Sbjct: 715 LIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRK 757
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 97/205 (47%)
Query: 10 RASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILN 69
RA ++V + + AE+V +M+ +G + + + ++ + K N+ + L+
Sbjct: 283 RAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLD 342
Query: 70 QMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAG 129
+M GLK++ +++ +L Y ++ + E + + D YN+ + + G
Sbjct: 343 KMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLG 402
Query: 130 FIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAK 189
+++ L Q + +G+ PDV+ +T+ I Y + V L++ +EMI +G PD T
Sbjct: 403 RVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYN 462
Query: 190 VLLAACSNEDQTEQVTTVIRTMDKD 214
VL++ + E+V + M +
Sbjct: 463 VLVSGLARNGHEEEVLEIYERMKAE 487
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 28/216 (12%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G PD +YN+LV R G + ++E MK G P ++ V++ V +
Sbjct: 453 GMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEA 512
Query: 65 EDILNQM---------------CKSGL---------KLDTFVLNSM-LNLYGRL---GQF 96
ED + + C++GL +L+ + S+ + L+ L G
Sbjct: 513 EDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYL 572
Query: 97 GKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSR 156
K +VL M E S +I + + + + + LF + +GL PD+ T+T
Sbjct: 573 EKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIM 632
Query: 157 IGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLL 192
I Y + + +FE+M G PD T VLL
Sbjct: 633 IHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLL 668
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 6/139 (4%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
DR YN+ DA + G + +A + ++MK GI P + ++ L+ + G V D++
Sbjct: 387 DRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLI 446
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCE---ADISTYNILINRY 125
++M +G+ D N +++ L + G EEVL + E E + T +++I
Sbjct: 447 DEMIGNGMSPDLITYNVLVS---GLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGL 503
Query: 126 GQAGFIDKMEGLFQLLHSK 144
A + + E F L K
Sbjct: 504 CFARKVKEAEDFFSSLEQK 522
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 4/171 (2%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
E D+A++N ++ Y + G VF M I P + +L A S+ G+V +
Sbjct: 482 AERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGK 541
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+ + L + FV ++++++Y + G E++ + + E + TY +I Y
Sbjct: 542 QLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTK----ERNSVTYTTMILGY 597
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
GQ G ++ LF + G+KPD +T+ + + A S L L+IFEEM
Sbjct: 598 GQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEM 648
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 11/185 (5%)
Query: 14 NILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCK 73
N L+ Y R G ++ + VF M+ + S ++SAF + G + ++ +M K
Sbjct: 357 NSLMVMYSRCGSVHKSFGVFLSMRERDVV----SWNTMISAFVQNGLDDEGLMLVYEMQK 412
Query: 74 SGLKLDTFVLNSMLNLYGRL--GQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
G K+D + ++L+ L + GK + + E +++Y LI+ Y ++G I
Sbjct: 413 QGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSY--LIDMYSKSGLI 469
Query: 132 DKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVL 191
+ LF+ S + D TW S I Y++ + +F +M++ P+ T +
Sbjct: 470 RISQKLFE--GSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASI 527
Query: 192 LAACS 196
L ACS
Sbjct: 528 LPACS 532
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 87/183 (47%), Gaps = 10/183 (5%)
Query: 16 LVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSG 75
L+D Y ++G + ++ +FE + M+ S +++ G+ K + +M +
Sbjct: 459 LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMI--SGYTQNGHTEKTFLVFRKMLEQN 516
Query: 76 LKLDTFVLNSMLNLYGRLGQ--FGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDK 133
++ + + S+L ++G GK ++ + + ++ + L++ Y +AG I
Sbjct: 517 IRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQ--YLDQNVFVASALVDMYSKAGAIKY 574
Query: 134 MEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLA 193
E +F S+ + + VT+T+ I Y + + R + +F M +SG PD T +L+
Sbjct: 575 AEDMF----SQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLS 630
Query: 194 ACS 196
ACS
Sbjct: 631 ACS 633
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 98/206 (47%), Gaps = 8/206 (3%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED----I 67
S+N L+ ++ AG L++A ++F +++ + +K+++V ++ K NV D
Sbjct: 362 SWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEY 421
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
QM S + ++ + +L++ L E+ + S +I N L+N Y +
Sbjct: 422 FRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAK 481
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
G + + +F+ + K D+++W S I Y + L +F+ MI SG +PDG
Sbjct: 482 CGLLSEGSLVFEAIRDK----DLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIA 537
Query: 188 AKVLLAACSNEDQTEQVTTVIRTMDK 213
+L+ACS+ E+ + +M K
Sbjct: 538 LVAVLSACSHAGLVEKGREIFYSMSK 563
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 81/184 (44%), Gaps = 4/184 (2%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 72
+N ++ A G +A ++ M++ G+T ++L A G C Q+
Sbjct: 126 WNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVI 185
Query: 73 KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFID 132
+ GLK + V+N +L LY + G+ G + M + ++N++I + Q +
Sbjct: 186 QIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMP----VRNRMSWNVMIKGFSQEYDCE 241
Query: 133 KMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLL 192
+F+ + + KPD VTWTS + +S+ + L+ F M SG G V
Sbjct: 242 SAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFF 301
Query: 193 AACS 196
+ C+
Sbjct: 302 SVCA 305
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 8/200 (4%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ +PD ++ ++ + + G D F M+ G + ++ V S ++
Sbjct: 250 MQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEA 309
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+S E + + K G + N+++++YG+ G+ E + + N I ++N
Sbjct: 310 LSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRN----KGIESWNS 365
Query: 121 LINRYGQAGFIDKMEGLFQLL----HSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
LI + AG +D+ LF L H +K +VVTWTS I + + LE F +M
Sbjct: 366 LITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQM 425
Query: 177 IDSGCYPDGGTAKVLLAACS 196
S + T +L+ C+
Sbjct: 426 QFSKVLANSVTICCILSICA 445
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 10/171 (5%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
+R S+N+++ + + A +FE M+R P + +LS S+ G K ED+L
Sbjct: 223 NRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCG---KFEDVL 279
Query: 69 ---NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+ M SG + L ++ L E+V + G E + + N LI+ Y
Sbjct: 280 KYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVY 339
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
G+ G + E LF+ + +KG++ +W S I ++ L +F E+
Sbjct: 340 GKQGKVKDAEHLFRQIRNKGIE----SWNSLITSFVDAGKLDEALSLFSEL 386
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 90/193 (46%), Gaps = 8/193 (4%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G + + N ++ + ++ + DA+ FE + + S+ L + N +
Sbjct: 403 GLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLV----SYNTFLDGTCRNLNFEQA 458
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+L+++ + L + F S+L+ +G K E++ + + + N LI+
Sbjct: 459 FKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISM 518
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
Y + G ID +F + ++ +V++WTS I ++K +R LE F +MI+ G P+
Sbjct: 519 YSKCGSIDTASRVFNFMENR----NVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPN 574
Query: 185 GGTAKVLLAACSN 197
T +L+ACS+
Sbjct: 575 EVTYVAILSACSH 587
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Query: 58 TGNVSKCEDILNQMCKSGLK-LDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADIS 116
G++ L+ M + G++ +D+ +S+L R F + V + E D
Sbjct: 39 AGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSV 98
Query: 117 TYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
YN LI+ Y ++G K E +F+ + G K DVV+W++ + Y + +++F E
Sbjct: 99 LYNSLISLYSKSGDSAKAEDVFETMRRFG-KRDVVSWSAMMACYGNNGRELDAIKVFVEF 157
Query: 177 IDSGCYPDGGTAKVLLAACSNED 199
++ G P+ ++ ACSN D
Sbjct: 158 LELGLVPNDYCYTAVIRACSNSD 180
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 94/190 (49%), Gaps = 5/190 (2%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDM-KRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
D S+N ++++Y + G A +F M G P + + +L + G S + +
Sbjct: 192 DVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQL 251
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
S + + FV N ++++Y + G M+E TV N S + D+ ++N ++ Y Q
Sbjct: 252 HCFAVTSEMIQNMFVGNCLVDMYAKCGM---MDEANTVFSNMSVK-DVVSWNAMVAGYSQ 307
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
G + LF+ + + +K DVVTW++ I Y+++ L L + +M+ SG P+ T
Sbjct: 308 IGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVT 367
Query: 188 AKVLLAACSN 197
+L+ C++
Sbjct: 368 LISVLSGCAS 377
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D S+N +V Y + G DA +FE M+ I + + +S +++ G + +
Sbjct: 294 DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVC 353
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEV--------LTVMENGSCEADISTYNI 120
QM SG+K + L S+L+ +G +E+ + + +NG + ++ N
Sbjct: 354 RQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENM-VINQ 412
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ Y + +D +F L K + DVVTWT IG YS+ + LE+ EM +
Sbjct: 413 LIDMYAKCKKVDTARAMFDSLSPK--ERDVVTWTVMIGGYSQHGDANKALELLSEMFEED 470
Query: 181 CY--PDGGTAKVLLAACSN 197
C P+ T L AC++
Sbjct: 471 CQTRPNAFTISCALVACAS 489
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 19/198 (9%)
Query: 14 NILVDAYGRAGFLNDAEAVFEDM---KRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQ 70
N L+D Y + ++ A A+F+ + +R +T T V++ +S+ G+ +K ++L++
Sbjct: 411 NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWT-----VMIGGYSQHGDANKALELLSE 465
Query: 71 M----CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLT-VMENGSCEADISTYNILINRY 125
M C++ + + F ++ L L +++ + N + N LI+ Y
Sbjct: 466 MFEEDCQT--RPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMY 523
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
+ G I +F + +K + VTWTS + Y L IF+EM G DG
Sbjct: 524 AKCGSISDARLVFDNMMAK----NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDG 579
Query: 186 GTAKVLLAACSNEDQTEQ 203
T V+L ACS+ +Q
Sbjct: 580 VTLLVVLYACSHSGMIDQ 597
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 89/180 (49%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ MG + D IL+D + + A V + MK GI+P + ++ L++ K+G
Sbjct: 39 MEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGR 98
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
++ E L++M + + +++++ Y + G+ K++ V +M S + ++ TY+
Sbjct: 99 LADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSS 158
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI +D+ + L+ SKG P+VVT+++ + K +++ ++M G
Sbjct: 159 LIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRG 218
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 90/191 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M +G EPD + + LV+ + + + DA V M+++GI + +L+ K
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V ++L +M G+ + +S++ + G+ E L M++ ++ T++
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ Y + G + K++ +++++ + P+V T++S I +++ + MI G
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183
Query: 181 CYPDGGTAKVL 191
C P+ T L
Sbjct: 184 CTPNVVTYSTL 194
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P+ +++ L+DAY + G L+ ++V++ M ++ I P + ++ L+ V + +
Sbjct: 116 PNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKM 175
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
L+ M G + +++ N + + + ++L M A+ + N LI Y Q
Sbjct: 176 LDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQ 235
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
AG ID G+F + S GL P++ ++ + + L FE M
Sbjct: 236 AGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHM 284
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 82/176 (46%)
Query: 36 MKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQ 95
M ++GI P + + L++ F + ++ + QM K G+K D V +++ +
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 96 FGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTS 155
EVL M++ ++ TY+ LI ++G + E + SK + P+V+T+++
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 156 RIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
I AY+K+ + +++ MI P+ T L+ ++ ++ ++ M
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLM 179
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/289 (19%), Positives = 104/289 (35%), Gaps = 76/289 (26%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G P+ +Y+ L+ ++G L DAE +M I P + + L+ A++K G
Sbjct: 74 MKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGK 133
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSM---LNLYGRLGQFGKMEEVLTVMENGSCEADIST 117
+SK + + M + + + F +S+ L ++ R+ + KM L +M + C ++ T
Sbjct: 134 LSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKM---LDLMISKGCTPNVVT 190
Query: 118 Y-----------------------------------NILINRYGQAGFIDKMEGLFQLLH 142
Y N LI Y QAG ID G+F +
Sbjct: 191 YSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMT 250
Query: 143 SKGLKP-----------------------------------DVVTWTSRIGAYSKKKLYV 167
S GL P D++T+T I K +
Sbjct: 251 SNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVK 310
Query: 168 RCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKDIK 216
++F ++ PD +++A + + + R K ++
Sbjct: 311 EAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQKHVR 359
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 96/202 (47%), Gaps = 9/202 (4%)
Query: 3 HMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVS 62
H+G + D + N + Y ++ A +F+ M + T S V++S +++ G++
Sbjct: 284 HLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMT----SRTCVSWTVMISGYAEKGDMD 339
Query: 63 KCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEAD-ISTYNIL 121
+ + + M KSG K D L S+++ G+ G + + + C+ D + N L
Sbjct: 340 EALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNAL 399
Query: 122 INRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGC 181
I+ Y + G I + +F K VVTWT+ I Y+ +++ L++F +MID
Sbjct: 400 IDMYSKCGSIHEARDIFDNTPEK----TVVTWTTMIAGYALNGIFLEALKLFSKMIDLDY 455
Query: 182 YPDGGTAKVLLAACSNEDQTEQ 203
P+ T +L AC++ E+
Sbjct: 456 KPNHITFLAVLQACAHSGSLEK 477
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 32 VFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYG 91
+F +MKR G P + + A ++ +V CE + + KS D FV + ++++
Sbjct: 39 LFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFV 98
Query: 92 RLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVV 151
+ +V M E D +T+N +++ + Q+G DK LF+ + + PD V
Sbjct: 99 KCNSVDYAAKVFERMP----ERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSV 154
Query: 152 TWTSRIGAYSKKKLYVRCLEIFEEM 176
T + I + S + + L++ E M
Sbjct: 155 TVMTLIQSAS----FEKSLKLLEAM 175
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 70/147 (47%), Gaps = 2/147 (1%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
E D ++N ++ + ++G + A ++F +M+ ITP + M L+ + S ++ E
Sbjct: 115 ERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEA 174
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+ + G+ + V N+ ++ YG+ G + V ++ G + + ++N + Y
Sbjct: 175 MHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRG--DRTVVSWNSMFKAYS 232
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTW 153
G GL+ L+ + KPD+ T+
Sbjct: 233 VFGEAFDAFGLYCLMLREEFKPDLSTF 259
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 93/194 (47%), Gaps = 5/194 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G D SY+IL+D + G + +A + M + G+ P + ++ ++ K G
Sbjct: 268 MVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGK 327
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + + N++ G+++D F+ ++++ R G + +L ME + I TYN
Sbjct: 328 LEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNT 387
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+IN AG + + + + SKG+ DV+T+++ + +Y K + LEI +++
Sbjct: 388 VINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAK 442
Query: 181 CYPDGGTAKVLLAA 194
D +LL A
Sbjct: 443 IPMDLVMCNILLKA 456
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 85/192 (44%), Gaps = 5/192 (2%)
Query: 4 MGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSK 63
+G E D Y L+D R G LN A ++ DM++ GI P++ ++ +++ G VS+
Sbjct: 341 VGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSE 400
Query: 64 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN 123
+++ G+ D +++L+ Y ++ + E+ D+ NIL+
Sbjct: 401 ADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLK 455
Query: 124 RYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYP 183
+ G + + L++ + L PD T+ + I Y K LE+F E+ S
Sbjct: 456 AFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA 515
Query: 184 DGGTAKVLLAAC 195
+++ A C
Sbjct: 516 AVCYNRIIDALC 527
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 78/175 (44%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G + +YN L++ + G L +A +F+ ++ +G+ P+ ++ +L+ K G
Sbjct: 685 GVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDA 744
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
E +L+ M GL + + NS+++ Y +LGQ V++ G D T + +I
Sbjct: 745 EKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKG 804
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
Y + G +++ +F K + D + I + K + EM+ S
Sbjct: 805 YCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVS 859
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 84/199 (42%), Gaps = 18/199 (9%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
++++G P +Y IL+D + G DAE + + M G+ P + + ++ + K G
Sbjct: 716 LENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQ 775
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
++++ + D F ++SM+ Y + G + V T ++ + AD +
Sbjct: 776 TEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLF 835
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVR------------ 168
LI + G +++ G LL + VV +R+ A + +R
Sbjct: 836 LIKGFCTKGRMEEARG---LLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQGRV 892
Query: 169 --CLEIFEEMIDSGCYPDG 185
++I +E I S YP G
Sbjct: 893 PQAIKILDE-ISSTIYPSG 910
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 70/169 (41%), Gaps = 1/169 (0%)
Query: 48 HMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVME 107
+ ++++ K G + K ++ + G+ L+T NS++N + G + + +E
Sbjct: 658 YTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLE 717
Query: 108 NGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYV 167
N TY ILI+ + G E L + SKGL P+++ + S + Y K
Sbjct: 718 NIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTE 777
Query: 168 RCLEIFEEMIDSGCYPDGGTAKVLLAA-CSNEDQTEQVTTVIRTMDKDI 215
+ + + PD T ++ C D E ++ DK+I
Sbjct: 778 DAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNI 826
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 8/182 (4%)
Query: 16 LVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSG 75
L+D Y + G N AE VF ++ +S V++S++ GN K ++ +QM G
Sbjct: 350 LIDLYFKCGEANLAETVFSKTQK----DVAESWNVMISSYISVGNWFKAVEVYDQMVSVG 405
Query: 76 LKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKME 135
+K D S+L +L K +++ + E D + L++ Y + G ++ E
Sbjct: 406 VKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCG--NEKE 463
Query: 136 GLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAAC 195
F++ +S K DVV+WT I AY L F+EM G PDG T +L+AC
Sbjct: 464 A-FRIFNSIP-KKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSAC 521
Query: 196 SN 197
+
Sbjct: 522 GH 523
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 8/167 (4%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM 71
S+N+++ +Y G A V++ M VG+ P + + +L A S+ + K + I +
Sbjct: 377 SWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSI 436
Query: 72 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
+S L+ D +L+++L++Y + G + + N + D+ ++ ++I+ YG G
Sbjct: 437 SESRLETDELLLSALLDMYSKCGNEKEAFRIF----NSIPKKDVVSWTVMISAYGSHG-- 490
Query: 132 DKMEGLFQL--LHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
E L+Q + GLKPD VT + + A L L+ F +M
Sbjct: 491 QPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQM 537
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 84/199 (42%), Gaps = 8/199 (4%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G E D + LVD YG+ L A VF+ M R ++ + ++ + G+ C
Sbjct: 238 GFELDEYVNSALVDMYGKCDCLEVAREVFQKMPR----KSLVAWNSMIKGYVAKGDSKSC 293
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ILN+M G + L S+L R + + + ADI LI+
Sbjct: 294 VEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDL 353
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
Y + G + E +F SK K +W I +Y + + +E++++M+ G PD
Sbjct: 354 YFKCGEANLAETVF----SKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPD 409
Query: 185 GGTAKVLLAACSNEDQTEQ 203
T +L ACS E+
Sbjct: 410 VVTFTSVLPACSQLAALEK 428
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 8/181 (4%)
Query: 16 LVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSG 75
LV Y + ++ VF++M + S ++S F ++G K ++ +M SG
Sbjct: 148 LVGMYAKFNLFENSLQVFDEMPERDVA----SWNTVISCFYQSGEAEKALELFGRMESSG 203
Query: 76 LKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKME 135
+ ++ L ++ RL + +E+ E D + L++ YG+ ++
Sbjct: 204 FEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAR 263
Query: 136 GLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAAC 195
+FQ + K L V W S I Y K C+EI MI G P T +L AC
Sbjct: 264 EVFQKMPRKSL----VAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMAC 319
Query: 196 S 196
S
Sbjct: 320 S 320
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 1/189 (0%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G PD I +D++ R ++ A +FE+ + G+ + +S LL + +VS
Sbjct: 181 GVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAA 240
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ + N K + D+ N M++ + +LG+ +ME+VL M D +Y+ LI
Sbjct: 241 KSVFNAK-KGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEG 299
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
G+ G I+ +F + KG PD + + I + + + + + M+D C P+
Sbjct: 300 LGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPN 359
Query: 185 GGTAKVLLA 193
T L++
Sbjct: 360 LETYSKLVS 368
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 88/191 (46%), Gaps = 1/191 (0%)
Query: 2 QHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNV 61
+ G + S+N L+ ++ A++VF + K+ I S+ +++S +SK G V
Sbjct: 213 ESFGVKCSTESFNALLRCLCERSHVSAAKSVF-NAKKGNIPFDSCSYNIMISGWSKLGEV 271
Query: 62 SKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNIL 121
+ E +L +M +SG D + ++ GR G+ E+ +++ D + YN +
Sbjct: 272 EEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAM 331
Query: 122 INRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGC 181
I + A D+ ++ + + +P++ T++ + K + LEIFEEM+ G
Sbjct: 332 ICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGV 391
Query: 182 YPDGGTAKVLL 192
P G L
Sbjct: 392 LPTTGLVTSFL 402
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 81/188 (43%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D SYNI++ + + G + + E V ++M G P S+ L+ +TG ++ +I
Sbjct: 254 DSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIF 313
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
+ + G D V N+M+ + F + M + CE ++ TY+ L++ +
Sbjct: 314 DNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKG 373
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTA 188
+ +F+ + S+G+ P TS + + I+++ +GC
Sbjct: 374 RKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAY 433
Query: 189 KVLLAACS 196
K+LL S
Sbjct: 434 KLLLKRLS 441
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 86/175 (49%), Gaps = 7/175 (4%)
Query: 8 PDRA--SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
P+++ ++N LV + + G ++A VF M+ G P + + LLSA ++TG VS
Sbjct: 169 PEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGS 228
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+ + GL L+ + +++NLY R G GK EV M+ E +++ + +I+ Y
Sbjct: 229 WVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMK----ETNVAAWTAMISAY 284
Query: 126 GQAGFIDKMEGLFQLLHSK-GLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
G G+ + LF + G P+ VT+ + + A + L +++ M S
Sbjct: 285 GTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKS 339
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G PD +YN L+ A + G ++A + M+ G+ P S+ V++ G+
Sbjct: 326 MVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGD 385
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V++ + L M KS L + + N +++ YGR G VL +M + + ++ T N
Sbjct: 386 VNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNA 445
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ Y + G + + + S + PD T+ +GA ++++EM+ G
Sbjct: 446 LIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRG 505
Query: 181 CYPD 184
C PD
Sbjct: 506 CQPD 509
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 84/197 (42%), Gaps = 1/197 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M D YN+++ +G + A DM + G+ P + ++ L+SA K G
Sbjct: 291 MSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGK 350
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ D+ M G+ D ++ G + E L M S ++ +N+
Sbjct: 351 FDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNV 410
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+I+ YG+ G + L+ S G+KP+V T + I Y K + + EM +
Sbjct: 411 VIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTK 470
Query: 181 CYPDGGTAKVLL-AACS 196
+PD T +LL AAC+
Sbjct: 471 IHPDTTTYNLLLGAACT 487
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 6/197 (3%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTG- 59
M+ MG P+ SYN L+ ++ A +F M + GI P + +++ A + G
Sbjct: 182 MREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGV 241
Query: 60 ----NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADI 115
N E+IL+ ++ LD + +++ + G + EV M + AD
Sbjct: 242 IGNNNKKLLEEILDS-SQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADS 300
Query: 116 STYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEE 175
YN++I +G + G + +G+ PDV T+ + I A K+ + ++
Sbjct: 301 VVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGT 360
Query: 176 MIDSGCYPDGGTAKVLL 192
M + G PD + KV++
Sbjct: 361 MQNGGVAPDQISYKVII 377
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 74/157 (47%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ+ G PD+ SY +++ G +N A M + + P + V++ + + G+
Sbjct: 361 MQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGD 420
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
S +LN M G+K + + N++++ Y + G+ V M + D +TYN+
Sbjct: 421 TSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNL 480
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRI 157
L+ G + L+ + +G +PD++T+T +
Sbjct: 481 LLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELV 517
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 68/155 (43%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P+ +N+++D YGR G + A +V M G+ P + ++ L+ + K G + +
Sbjct: 403 PEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWV 462
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
N+M + + DT N +L LG ++ M C+ DI TY L+
Sbjct: 463 KNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCW 522
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSK 162
G + K E L + + G+ D V + Y++
Sbjct: 523 KGRLKKAESLLSRIQATGITIDHVPFLILAKKYTR 557
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 77/178 (43%)
Query: 15 ILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKS 74
IL+D+ + G + A V+++M + + + V++ +GN+ + M K
Sbjct: 270 ILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKR 329
Query: 75 GLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKM 134
G+ D F N++++ + G+F + ++ M+NG D +Y ++I G +++
Sbjct: 330 GVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRA 389
Query: 135 EGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLL 192
+ L P+V+ W I Y + L + M+ G P+ T L+
Sbjct: 390 NEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALI 447
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 17/192 (8%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM 71
S+ ++ R G L +A F DM G+ P +H+ ++ S G+ + + L +
Sbjct: 38 SWTSRINLLTRNGRLAEAAKEFSDMTLAGVEP---NHITFIALLSGCGDFTSGSEALGDL 94
Query: 72 -----CKSGL-KLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
CK GL + V +++ +Y + G+F K V ME + + T+N +I+ Y
Sbjct: 95 LHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYME----DKNSVTWNTMIDGY 150
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
++G +D +F + + D+++WT+ I + KK L F EM SG PD
Sbjct: 151 MRSGQVDNAAKMFDKMPER----DLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDY 206
Query: 186 GTAKVLLAACSN 197
L AC+N
Sbjct: 207 VAIIAALNACTN 218
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 4/170 (2%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
E D S+ +++ + + G+ +A F +M+ G+ P + + L+A + G +S
Sbjct: 168 ERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLW 227
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+ + K + V NS+++LY R G +V ME + + ++N +I +
Sbjct: 228 VHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRT----VVSWNSVIVGFA 283
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
G + F+ + KG KPD VT+T + A S L L F+ M
Sbjct: 284 ANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIM 333
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 89/210 (42%), Gaps = 8/210 (3%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
+ + ++N ++D Y R+G +++A +F+ M + S +++ F K G +
Sbjct: 137 DKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLI----SWTAMINGFVKKGYQEEALL 192
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+M SG+K D + + LN LG V + + + ++ N LI+ Y
Sbjct: 193 WFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYC 252
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGG 186
+ G ++ +F + K VV+W S I ++ L F +M + G PD
Sbjct: 253 RCGCVEFARQVFYNME----KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAV 308
Query: 187 TAKVLLAACSNEDQTEQVTTVIRTMDKDIK 216
T L ACS+ E+ + M D +
Sbjct: 309 TFTGALTACSHVGLVEEGLRYFQIMKCDYR 338
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 94/213 (44%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G P+ SYN+L+ A+ L+ A +F M + P + S+ +L+ F + G V+
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
++L+ M G D ++LN R Q + ++L M+ C D+ YN +I
Sbjct: 245 MELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILG 304
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ + + + S G P+ V++ + IG + ++ + EEMI G P
Sbjct: 305 FCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPH 364
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTMDKDIKT 217
+ L+ + + E+ V+ + K+ +T
Sbjct: 365 FSVSNCLVKGFCSFGKVEEACDVVEVVMKNGET 397
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 84/197 (42%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
PD SY IL+ + R G +N A + +DM G P S+ LL++ + + + +
Sbjct: 223 PDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKL 282
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
L +M G D N+M+ + R + +VL M + C + +Y LI
Sbjct: 283 LCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCD 342
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
G D+ + + + SKG P + + ++ E ++ +G T
Sbjct: 343 QGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDT 402
Query: 188 AKVLLAACSNEDQTEQV 204
++++ NED++E++
Sbjct: 403 WEMVIPLICNEDESEKI 419
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 94/196 (47%), Gaps = 3/196 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMK-RVGITPTMKSHMVLLSAFSKTG 59
M + C+ S+N L+ AY + + E +F ++ ++ I P + S+ L+ A +
Sbjct: 135 MPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKD 194
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
++ + +L+++ GLK D N++L GQF EE+ M + DI TYN
Sbjct: 195 SLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYN 254
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRI-GAYSKKKLYVRCLEIFEEMID 178
+ ++ LF L + GLKPDV ++ + I G+ ++ K+ ++E++
Sbjct: 255 ARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMD-EAEAWYKEIVK 313
Query: 179 SGCYPDGGTAKVLLAA 194
G PD T +LL A
Sbjct: 314 HGYRPDKATFALLLPA 329
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSK- 144
+++LYG+ G F ++V M N C+ + ++N L++ Y + D +E LF L K
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL 174
Query: 145 GLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLL 192
+KPD+V++ + I A +K + + +E+ + G PD T LL
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLL 222
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 86/203 (42%), Gaps = 39/203 (19%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM 71
S+ +V YG+ G +A +F DM+R GI P H L A S NVS E+
Sbjct: 338 SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDP---DHYTLGQAISACANVSSLEE----- 389
Query: 72 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
G + + S L Y ++ N L+ YG+ G I
Sbjct: 390 ---GSQFHGKAITSGLIHY------------------------VTVSNSLVTLYGKCGDI 422
Query: 132 DKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVL 191
D LF ++ + D V+WT+ + AY++ V +++F++M+ G PDG T +
Sbjct: 423 DDSTRLFNEMNVR----DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGV 478
Query: 192 LAACSNEDQTEQVTTVIRTMDKD 214
++ACS E+ + M +
Sbjct: 479 ISACSRAGLVEKGQRYFKLMTSE 501
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 45/244 (18%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMK-RVGIT---------------PTMKSH-- 48
+P+ S+N L+ AY +AG +++ E+ FE + R G+T +K++
Sbjct: 69 QPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNT 128
Query: 49 --------------MVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLG 94
M +L S G+VS + I Q+ K G + V + +L +Y +G
Sbjct: 129 MMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVG 188
Query: 95 QFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWT 154
++V ++ + + YN L+ G I+ LF +G++ D V+W
Sbjct: 189 CISDAKKVFYGLD----DRNTVMYNSLMGGLLACGMIEDALQLF-----RGMEKDSVSWA 239
Query: 155 SRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNE---DQTEQVTT-VIRT 210
+ I ++ L +E F EM G D +L AC ++ +Q+ +IRT
Sbjct: 240 AMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRT 299
Query: 211 MDKD 214
+D
Sbjct: 300 NFQD 303
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
Query: 14 NILVDAYGRAGFLNDAEAVFEDMK-RVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 72
N LV YG+ G ++D+ +F +M R ++ T ++SA+++ G + + ++M
Sbjct: 410 NSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWT-----AMVSAYAQFGRAVETIQLFDKMV 464
Query: 73 KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVM--ENGSCEADISTYNILINRYGQAGF 130
+ GLK D L +++ R G K + +M E G + I Y+ +I+ + ++G
Sbjct: 465 QHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPS-IGHYSCMIDLFSRSG- 522
Query: 131 IDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKK 163
++E + ++ PD + WT+ + A K
Sbjct: 523 --RLEEAMRFINGMPFPPDAIGWTTLLSACRNK 553
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 92/181 (50%), Gaps = 6/181 (3%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G D S+ L+D Y + G L A +++ M ++ T + + +++ SK G
Sbjct: 461 GLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAA 520
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADIS--TYNILI 122
E ++N M +K D N++LN + G + +++L+ M+ E +S T+NI+I
Sbjct: 521 EAVVNAM---EIK-DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMI 576
Query: 123 NRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCY 182
N + G +K + + + + +G+ PD +T+ + I ++SK + + +E+ + +I G
Sbjct: 577 NHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVT 636
Query: 183 P 183
P
Sbjct: 637 P 637
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P+ +YN +++ + +AG L+ AE + DM + G+ +++ L+ A+ + G+ + +
Sbjct: 289 PNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRL 348
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
++M GL ++T + NS++ L G +E ++V+ D+++ N+ I+R+ Q
Sbjct: 349 CDEMTSKGLVVNTVIYNSIVYW---LFMEGDIEGAMSVLR------DMNSKNMQIDRFTQ 399
Query: 128 A---------GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID 178
A G++ + + + K L D+V + + + + K +I M+
Sbjct: 400 AIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLV 459
Query: 179 SGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKDIKT 217
G D + L+ E + E+ + M K KT
Sbjct: 460 QGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKT 498
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 78/161 (48%), Gaps = 9/161 (5%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M +G + ++N+++ ++ + L +A +VF M + G+ P + S +++ KTG+
Sbjct: 209 MDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGD 268
Query: 61 VSKCEDILNQMCKSGLKLDTFV------LNSMLNLYGRLGQFGKMEEVLTVMENGSCEAD 114
+ +L +M G+ FV NS++N + + G+ E + M + +
Sbjct: 269 MRFALQLLGKM---GMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCN 325
Query: 115 ISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTS 155
TY L++ YG+AG D+ L + SKGL + V + S
Sbjct: 326 ERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNS 366
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G + + +Y LVDAYGRAG ++A + ++M G+ + ++ G+
Sbjct: 317 MVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGD 376
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ +L M +++D F ++ R G + E + DI +N
Sbjct: 377 IEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNT 436
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
L++ + + + + + + +GL D +++ + I Y K+ R LEI++ MI
Sbjct: 437 LMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMI 493
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 14/224 (6%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
+ G P+ +Y+ L++A + ++A + +++ G P + S+ VLL+ F K G
Sbjct: 202 LMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGR 261
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ ++ G K + N +L G++ + +L M+ G + TYNI
Sbjct: 262 TDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNI 321
Query: 121 LINRYGQAGFIDKMEGLFQLLH--SKGLKPDVVTWTS------RIGAYSKKKLYVRCLEI 172
LIN F + E Q+L SKG VT TS R+ K L V+CL
Sbjct: 322 LIN---SLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCL-- 376
Query: 173 FEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKDIK 216
+EMI C P+ GT + + C + + ++ +I+++ K
Sbjct: 377 -DEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQK 419
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 87/205 (42%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
+PD S + D L+D+ + E + G P + LL K + K
Sbjct: 68 KPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIR 127
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
++ M SG+ D ++N + G G +++ ME+ ++ TYN L+
Sbjct: 128 VIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLC 187
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGG 186
G +++ + L KGL P+ T++ + A K++ +++ +E+I G P+
Sbjct: 188 MLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLV 247
Query: 187 TAKVLLAACSNEDQTEQVTTVIRTM 211
+ VLL E +T+ + R +
Sbjct: 248 SYNVLLTGFCKEGRTDDAMALFREL 272
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 92/244 (37%), Gaps = 35/244 (14%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G +P+ A L+ +A L A V E M GI P ++ L++ K GNV
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 65 EDILNQMCKSGLKLDTFV-------------LNSMLNLYGRLGQFGKMEEVLT------- 104
++ +M G +T LN L RL Q G T
Sbjct: 161 MQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEA 220
Query: 105 -VMENGSCEA--------------DISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPD 149
E G+ EA ++ +YN+L+ + + G D LF+ L +KG K +
Sbjct: 221 AYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKAN 280
Query: 150 VVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIR 209
VV++ + + + EM P T +L+ + + +TEQ V++
Sbjct: 281 VVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLK 340
Query: 210 TMDK 213
M K
Sbjct: 341 EMSK 344
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 88/190 (46%), Gaps = 14/190 (7%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P +Y+ LV A A E++ + + G +K L+ +S TG + + +
Sbjct: 869 PSSYTYSSLVKASSFASRF--GESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKV 926
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
++M + D +M++ Y R+ + N E + +T N LIN Y
Sbjct: 927 FDEMPER----DDIAWTTMVSAYRRVLDMDSANS----LANQMSEKNEATSNCLINGYMG 978
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGT 187
G +++ E LF + K D+++WT+ I YS+ K Y + +F +M++ G PD T
Sbjct: 979 LGNLEQAESLFNQMPVK----DIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVT 1034
Query: 188 AKVLLAACSN 197
+++AC++
Sbjct: 1035 MSTVISACAH 1044
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 4/170 (2%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D S+ ++ Y + +A AVF M GI P + ++SA + G + +++
Sbjct: 996 DIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVH 1055
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
++G LD ++ ++++++Y + G +E L V N + ++ +N +I
Sbjct: 1056 MYTLQNGFVLDVYIGSALVDMYSKCG---SLERALLVFFNLP-KKNLFCWNSIIEGLAAH 1111
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID 178
GF + +F + + +KP+ VT+ S A + L I+ MID
Sbjct: 1112 GFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMID 1161
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 93/221 (42%), Gaps = 36/221 (16%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P S+N ++ Y + GF++ A++ F + + G+ P++ SH +L++ G++++ ++
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
+ M K G++ D+ N + + LG EV+ M + D+ TY IL+ Q
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339
Query: 128 ------------------------------------AGFIDKMEGLFQLLHSKGLKPDVV 151
G ID+ LF + + GL PD+V
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399
Query: 152 TWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLL 192
++ I K + L +++EM D P+ T LL
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 440
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 93/209 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G PD +Y+I++ + G + A ++++M I P ++H LL + G
Sbjct: 389 MKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGM 448
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + +L+ + SG LD + N +++ Y + G + E+ V+ ++T+N
Sbjct: 449 LLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNS 508
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI Y + I + + ++ GL P VV++T+ + AY+ E+ EM G
Sbjct: 509 LIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEG 568
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIR 209
P T V+ + E V+R
Sbjct: 569 IPPTNVTYSVIFKGLCRGWKHENCNHVLR 597
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 110/285 (38%), Gaps = 71/285 (24%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLL-------- 52
M G EPD +YNIL + G ++ A V DM G++P + ++ +LL
Sbjct: 283 MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN 342
Query: 53 ----------------------------SAFSKTGNVSKCEDILNQMCKSGLKLDTFVLN 84
S KTG + + + NQM GL D +
Sbjct: 343 IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYS 402
Query: 85 SMLNLYGRLGQF--------------------------------GKMEEVLTVMEN--GS 110
+++ +LG+F G + E +++++ S
Sbjct: 403 IVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS 462
Query: 111 CEA-DISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRC 169
E DI YNI+I+ Y ++G I++ LF+++ G+ P V T+ S I Y K +
Sbjct: 463 GETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 522
Query: 170 LEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
+I + + G P + L+ A +N T+ + + R M +
Sbjct: 523 RKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAE 567
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 12/188 (6%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G P SY L+DAY G + + +MK GI PT ++ V+ + C
Sbjct: 533 GLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENC 592
Query: 65 EDILNQM----CKSGLK--------LDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCE 112
+L + CK GL+ D N+++ R+ L +M++ + +
Sbjct: 593 NHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLD 652
Query: 113 ADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEI 172
A +TYNILI+ G+I K + L + + +T+ I A+ K +++
Sbjct: 653 ASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKL 712
Query: 173 FEEMIDSG 180
F +++ G
Sbjct: 713 FHQLLHRG 720
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 65/148 (43%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
+ + +Y+ +VD R L DA + I P++ S ++S + K G V +
Sbjct: 184 DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKS 243
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+ K GL + N ++N +G + E+ + M E D TYNIL +
Sbjct: 244 FFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFH 303
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWT 154
G I + + + KGL PDV+T+T
Sbjct: 304 LLGMISGAWEVIRDMLDKGLSPDVITYT 331
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 71/173 (41%), Gaps = 35/173 (20%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D YNI++D Y ++G + +A +F+ + GITP++ + L+ + KT N+++ IL
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
+ ++ LYG + +Y L++ Y
Sbjct: 527 D----------------VIKLYG-------------------LAPSVVSYTTLMDAYANC 551
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGC 181
G ++ L + + ++G+ P VT++ + + C + E I C
Sbjct: 552 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 95/192 (49%), Gaps = 12/192 (6%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMK---RVGITPTMKSHMVLLSAFSKTGNVSKCE 65
D +N L+ YG+ G +++A ++ E M R ++ T ++S ++K+G S+
Sbjct: 181 DVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWT-----CVISGYAKSGRASEAI 235
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
++ +M ++ D L ++L+ LG E + + +++ +S N +I+ Y
Sbjct: 236 EVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMY 295
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
++G I K +F+ ++ + +VVTWT+ I + L +F M+ +G P+
Sbjct: 296 AKSGNITKALDVFECVNER----NVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPND 351
Query: 186 GTAKVLLAACSN 197
T +L+ACS+
Sbjct: 352 VTFIAILSACSH 363
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 71/169 (42%), Gaps = 6/169 (3%)
Query: 29 AEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLN 88
A V+ + + P + +L + +V I Q+ G V+ ++
Sbjct: 100 AITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQ 159
Query: 89 LYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKP 148
+Y G G ++ M D++ +N L+ YG+ G +D+ L +++
Sbjct: 160 MYFSCGGLGDARKMFDEM----LVKDVNVWNALLAGYGKVGEMDEARSLLEMM--PCWVR 213
Query: 149 DVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSN 197
+ V+WT I Y+K +E+F+ M+ PD T +L+AC++
Sbjct: 214 NEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACAD 262
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 93/221 (42%), Gaps = 36/221 (16%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
P S+N ++ Y + GF++ A++ F + + G+ P++ SH +L++ G++++ ++
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
+ M K G++ D+ N + + LG EV+ M + D+ TY IL+ Q
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339
Query: 128 ------------------------------------AGFIDKMEGLFQLLHSKGLKPDVV 151
G ID+ LF + + GL PD+V
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399
Query: 152 TWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLL 192
++ I K + L +++EM D P+ T LL
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 440
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 93/209 (44%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G PD +Y+I++ + G + A ++++M I P ++H LL + G
Sbjct: 389 MKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGM 448
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + +L+ + SG LD + N +++ Y + G + E+ V+ ++T+N
Sbjct: 449 LLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNS 508
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI Y + I + + ++ GL P VV++T+ + AY+ E+ EM G
Sbjct: 509 LIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEG 568
Query: 181 CYPDGGTAKVLLAACSNEDQTEQVTTVIR 209
P T V+ + E V+R
Sbjct: 569 IPPTNVTYSVIFKGLCRGWKHENCNHVLR 597
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 110/285 (38%), Gaps = 71/285 (24%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLL-------- 52
M G EPD +YNIL + G ++ A V DM G++P + ++ +LL
Sbjct: 283 MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN 342
Query: 53 ----------------------------SAFSKTGNVSKCEDILNQMCKSGLKLDTFVLN 84
S KTG + + + NQM GL D +
Sbjct: 343 IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYS 402
Query: 85 SMLNLYGRLGQF--------------------------------GKMEEVLTVMEN--GS 110
+++ +LG+F G + E +++++ S
Sbjct: 403 IVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS 462
Query: 111 CEA-DISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRC 169
E DI YNI+I+ Y ++G I++ LF+++ G+ P V T+ S I Y K +
Sbjct: 463 GETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 522
Query: 170 LEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
+I + + G P + L+ A +N T+ + + R M +
Sbjct: 523 RKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAE 567
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 12/188 (6%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G P SY L+DAY G + + +MK GI PT ++ V+ + C
Sbjct: 533 GLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENC 592
Query: 65 EDILNQM----CKSGLK--------LDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCE 112
+L + CK GL+ D N+++ R+ L +M++ + +
Sbjct: 593 NHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLD 652
Query: 113 ADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEI 172
A +TYNILI+ G+I K + L + + +T+ I A+ K +++
Sbjct: 653 ASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKL 712
Query: 173 FEEMIDSG 180
F +++ G
Sbjct: 713 FHQLLHRG 720
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 65/148 (43%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
+ + +Y+ +VD R L DA + I P++ S ++S + K G V +
Sbjct: 184 DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKS 243
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+ K GL + N ++N +G + E+ + M E D TYNIL +
Sbjct: 244 FFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFH 303
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWT 154
G I + + + KGL PDV+T+T
Sbjct: 304 LLGMISGAWEVIRDMLDKGLSPDVITYT 331
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 71/173 (41%), Gaps = 35/173 (20%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D YNI++D Y ++G + +A +F+ + GITP++ + L+ + KT N+++ IL
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
+ ++ LYG + +Y L++ Y
Sbjct: 527 D----------------VIKLYG-------------------LAPSVVSYTTLMDAYANC 551
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGC 181
G ++ L + + ++G+ P VT++ + + C + E I C
Sbjct: 552 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 96/202 (47%), Gaps = 11/202 (5%)
Query: 4 MGCEPDRASYNILVDAYGRAGFLN--DAEA---VFEDMKRVGITPTMKSHMVLLSAFSKT 58
M P+ S+NIL+ GFL+ D EA VF++M + + P++ ++ L+ +
Sbjct: 180 MRLRPNSVSFNILI-----KGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRN 234
Query: 59 GNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTY 118
++ K + +L M K ++ + ++ G++ + ++++ ME C+ + Y
Sbjct: 235 DDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNY 294
Query: 119 NILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID 178
IL++ G+ G ID+ + L + + +KPDVV + + + + EM
Sbjct: 295 GILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQM 354
Query: 179 SGCYPDGGTAKVLL-AACSNED 199
GC P+ T ++++ C ED
Sbjct: 355 KGCKPNAATYRMMIDGFCRIED 376
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 92/217 (42%), Gaps = 8/217 (3%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M M +P +YN L+ R + A+++ EDM + I P + +L+ G
Sbjct: 212 MLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGE 271
Query: 61 VSKCEDILNQM----CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADIS 116
++ + ++ M CK GL ++ +L S L G+ G+ + + +L M+ + D+
Sbjct: 272 YNEAKKLMFDMEYRGCKPGL-VNYGILMSDL---GKRGRIDEAKLLLGEMKKRRIKPDVV 327
Query: 117 TYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
YNIL+N + + + + KG KP+ T+ I + + + + L + M
Sbjct: 328 IYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAM 387
Query: 177 IDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
+ S P T ++A + V+ M K
Sbjct: 388 LASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGK 424
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 81/190 (42%), Gaps = 1/190 (0%)
Query: 28 DAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSML 87
+A ++F + +G S+ L+ +K+ N + IL + ++ + ++
Sbjct: 64 EALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLI 123
Query: 88 NLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLK 147
YG+ G K +V + + C I + N LIN G ++K + F L+
Sbjct: 124 QHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLR 183
Query: 148 PDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLA-ACSNEDQTEQVTT 206
P+ V++ I + K + ++F+EM++ P T L+ C N+D + +
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSL 243
Query: 207 VIRTMDKDIK 216
+ + K I+
Sbjct: 244 LEDMIKKRIR 253
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 11/191 (5%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 72
YN L+ +Y G + A+F M + P + L+ A + +VS + Q
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 73 KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFID 132
K G D FV S + YG +G ++ + N C + N L++ G+ G +D
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILN-PC---VVACNSLLDACGRNGEMD 169
Query: 133 KMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID---SGCYPDGGTAK 189
FQ + DVV+WT+ I +SKK L+ + L +F EMI + P+ T
Sbjct: 170 YAFEYFQRMPVT----DVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFV 225
Query: 190 VLLAACSNEDQ 200
+L++C+N DQ
Sbjct: 226 SVLSSCANFDQ 236
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 98/229 (42%), Gaps = 39/229 (17%)
Query: 16 LVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSG 75
LV Y G + DA VF++M + I+ + V++ A ++ G + D +M K G
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCV----VMIGACARNGYYQESLDFFREMYKDG 112
Query: 76 LKLDTFVLNSML----NLYGRLGQFGKMEEVLTVM---------------------ENGS 110
LKLD F++ S+L NL R +FGKM L + E G+
Sbjct: 113 LKLDAFIVPSLLKASRNLLDR--EFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGN 170
Query: 111 C--------EADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSK 162
E D+ +N +I+ Y D+ L + + G+KPDV+TW + I +S
Sbjct: 171 ARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSH 230
Query: 163 KKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+ + EI E M G PD + +++ + Q E+ + M
Sbjct: 231 MRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQM 279
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 102/234 (43%), Gaps = 45/234 (19%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
E D +N ++ Y ++A + +DMK +GI P + + L+S FS N K +
Sbjct: 180 EQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSE 239
Query: 67 ILNQMCKSGLKLD----TFVLNSMLNLYGRLGQFGKMEEVLT------------------ 104
IL MC G K D T +++ +++ + F +++LT
Sbjct: 240 ILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACT 299
Query: 105 ---VMENGSCEADISTYNI-------------LINRYGQAGFIDKMEGLFQLLHSKGLKP 148
M++G +I Y++ L++ YG+ GFI + LF+ K K
Sbjct: 300 TLAYMKHGK---EIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFR----KTPKK 352
Query: 149 DVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTE 202
VT+ S I Y+ L + +E+F++M +G D T +L ACS+ T+
Sbjct: 353 TTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTD 406
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G +PD YN ++ + ++A V++ MK G+ P ++ L+ SK G V +
Sbjct: 260 GFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
L M +G + DT S++N R G+ +L ME C + TYN L++
Sbjct: 320 RMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHG 379
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+A +DK L++++ S G+K + + + + + K E+F+ +DS D
Sbjct: 380 LCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSD 439
Query: 185 GGTAKVL 191
L
Sbjct: 440 ASAYSTL 446
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 86/186 (46%), Gaps = 1/186 (0%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKR-VGITPTMKSHMVLLSAFSKTGNVSKCED 66
PD +YN L+ + L+ ++M+ + P + S +L+ + N+ +
Sbjct: 192 PDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMY 251
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+++++ +G K D F+ N+++ + L + + V M+ E D TYN LI
Sbjct: 252 LVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLS 311
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGG 186
+AG +++ + + G +PD T+TS + +K + L + EEM GC P+
Sbjct: 312 KAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDC 371
Query: 187 TAKVLL 192
T LL
Sbjct: 372 TYNTLL 377
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 90/207 (43%), Gaps = 3/207 (1%)
Query: 8 PDRASYNILVDAYGRA--GFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
P R+++ IL+ RA +++ V M G+ P + + + + +TG V + +
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENG-SCEADISTYNILINR 124
D++ ++ + DT+ N +L + + E + M + + D+ ++ ILI+
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDN 239
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ + + L L + G KPD + + + + + ++++M + G PD
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD 299
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTM 211
T L+ S + E+ ++TM
Sbjct: 300 QITYNTLIFGLSKAGRVEEARMYLKTM 326
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 94/200 (47%), Gaps = 6/200 (3%)
Query: 16 LVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSG 75
++ +G+ G + +E K++ TP M ++ G+ K I + K
Sbjct: 238 IIHGFGKKGDMVSVMTAYEACKQILDTPNMYICRTMIDVCGLCGDYVKSRYIYEDLLKEN 297
Query: 76 LKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKME 135
+K + +V+NS++N+ G +V M+ AD+++YNIL+ AG +D +
Sbjct: 298 IKPNIYVINSLMNVNSH--DLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQ 355
Query: 136 GLF---QLLHSKG-LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVL 191
++ + + S G LK D T+ + I ++ K++ L++ ++M G P+ T L
Sbjct: 356 DIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSL 415
Query: 192 LAACSNEDQTEQVTTVIRTM 211
++AC+N EQ + M
Sbjct: 416 ISACANAGLVEQANHLFEEM 435
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
GCEP+ +NIL+ A A + A +F+ K + ++ + ++ + + N+ K
Sbjct: 439 GCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKN 498
Query: 65 E---DILNQMCKSG---------LKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCE 112
++N+ S K T N +L G + + +E++ M++
Sbjct: 499 NGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACG--TDYYRGKELMDEMKSLGLS 556
Query: 113 ADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEI 172
+ T++ LI+ G +G ++ + + +HS G +PDVV +T+ I ++ K +
Sbjct: 557 PNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSL 616
Query: 173 FEEMIDSGCYPDGGTAKVLLAACS 196
FEEM P+ T LL A S
Sbjct: 617 FEEMRRYQIKPNWVTYNTLLKARS 640
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 87/216 (40%), Gaps = 16/216 (7%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D +Y ++ + A A V +DMK VG+TP + L+SA + G V + +
Sbjct: 373 DAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLF 432
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVME----NGSCEAD-------IST 117
+M SG + ++ N +L+ Q+ + + + N S AD S+
Sbjct: 433 EEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSS 492
Query: 118 YNILINRYGQAGFIDKMEGLFQLLHSKG--LKPDVVTWTSRIGAYSKKKLYVRCLEIFEE 175
NIL N G +++ + SK KP T+ + A Y R E+ +E
Sbjct: 493 PNILKNN-GPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGTD--YYRGKELMDE 549
Query: 176 MIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
M G P+ T L+ C E ++RTM
Sbjct: 550 MKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTM 585
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 76/169 (44%), Gaps = 5/169 (2%)
Query: 27 NDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSM 86
N + KR PT ++ +LL A + + ++++++M GL + +++
Sbjct: 508 NSNSPYIQASKRFCFKPTTATYNILLKACGT--DYYRGKELMDEMKSLGLSPNQITWSTL 565
Query: 87 LNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGL 146
+++ G G +L M + D+ Y I + + LF+ + +
Sbjct: 566 IDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQI 625
Query: 147 KPDVVTWTSRIGAYSK--KKLYVR-CLEIFEEMIDSGCYPDGGTAKVLL 192
KP+ VT+ + + A SK L VR CL I+++M ++G P+ K L+
Sbjct: 626 KPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELI 674
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 93/196 (47%), Gaps = 8/196 (4%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
E + S++ L+ Y +G LN A+ +FE M + S L++ FS+TG+
Sbjct: 224 ERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVV----SWTTLINGFSQTGDYETAIS 279
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+M + GLK + + + ++L+ + G G + + + + D + L++ Y
Sbjct: 280 TYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYA 339
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGG 186
+ G +D +F ++ K D+++WT+ I ++ + + ++ F +M+ SG PD
Sbjct: 340 KCGELDCAATVFSNMNHK----DILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEV 395
Query: 187 TAKVLLAACSNEDQTE 202
+L AC N + +
Sbjct: 396 VFLAVLTACLNSSEVD 411
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 90/196 (45%), Gaps = 8/196 (4%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M +G +PDR ++ ++ + + GF A+ + + + L+ ++KTG
Sbjct: 117 MLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQ 176
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + + K + N ++N Y R K + T + E + +++
Sbjct: 177 LKHAFQVFEESPDRIKKESILIWNVLINGYCR----AKDMHMATTLFRSMPERNSGSWST 232
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI Y +G +++ + LF+L+ K +VV+WT+ I +S+ Y + + EM++ G
Sbjct: 233 LIKGYVDSGELNRAKQLFELMPEK----NVVSWTTLINGFSQTGDYETAISTYFEMLEKG 288
Query: 181 CYPDGGTAKVLLAACS 196
P+ T +L+ACS
Sbjct: 289 LKPNEYTIAAVLSACS 304
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 82/188 (43%), Gaps = 13/188 (6%)
Query: 31 AVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLY 90
+V+ M+ ++P + LL +F ++ + Q+ GL D FV S+LN+Y
Sbjct: 48 SVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMY 107
Query: 91 GRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDV 150
G + V + S D+ +N ++N Y +AG ID LF + + +V
Sbjct: 108 SSCGDLRSAQRVF----DDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPER----NV 159
Query: 151 VTWTSRIGAYSKKKLYVRCLEIFEEMI-----DSGCYPDGGTAKVLLAACSNEDQTEQVT 205
++W+ I Y Y L++F EM ++ P+ T +L+AC EQ
Sbjct: 160 ISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGK 219
Query: 206 TVIRTMDK 213
V +DK
Sbjct: 220 WVHAYIDK 227
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 99/209 (47%), Gaps = 13/209 (6%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D ++N +V+AY +AG ++DA +F++M + S L++ + G + D+
Sbjct: 127 DLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVI----SWSCLINGYVMCGKYKEALDLF 182
Query: 69 NQM-----CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN 123
+M ++ ++ + F ++++L+ GRLG + + V ++ E DI LI+
Sbjct: 183 REMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALID 242
Query: 124 RYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS-GCY 182
Y + G +++ + +F L G K DV +++ I + L C ++F EM S
Sbjct: 243 MYAKCGSLERAKRVFNAL---GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNIN 299
Query: 183 PDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
P+ T +L AC + + + + M
Sbjct: 300 PNSVTFVGILGACVHRGLINEGKSYFKMM 328
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 12/184 (6%)
Query: 16 LVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSG 75
LVD Y + G+L A F+ +K TM S L+ +++ G + + ++ +
Sbjct: 253 LVDLYVKCGYLFSARKAFDQIKE----KTMISWSSLILGYAQEGEFVEAMGLFKRLQELN 308
Query: 76 LKLDTFVLNSMLNLYGRLGQF--GKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDK 133
++D+F L+S++ ++ GK + L V E S N +++ Y + G +D+
Sbjct: 309 SQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLET--SVLNSVVDMYLKCGLVDE 366
Query: 134 MEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLA 193
E F + K DV++WT I Y K L + + IF EM+ PD +L+
Sbjct: 367 AEKCFAEMQLK----DVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLS 422
Query: 194 ACSN 197
ACS+
Sbjct: 423 ACSH 426
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 12/167 (7%)
Query: 14 NILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCK 73
N LVD Y + G +N+AE VF +R+ + ++ S +++ F G SK D M +
Sbjct: 146 NSLVDMYSKCGRINEAEKVF---RRI-VDRSLISWNAMIAGFVHAGYGSKALDTFGMMQE 201
Query: 74 SGLK--LDTFVLNSMLNLYGRLGQF--GKMEEVLTVMENGSCEADISTYNILINRYGQAG 129
+ +K D F L S+L G GK V C + + L++ Y + G
Sbjct: 202 ANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCG 261
Query: 130 FIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
++ F + K + ++W+S I Y+++ +V + +F+ +
Sbjct: 262 YLFSARKAFDQIKEKTM----ISWSSLILGYAQEGEFVEAMGLFKRL 304
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 6/205 (2%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVG-ITPTMKSHMVLLSAFSKTGNVSKCEDI 67
D S+N ++ Y + GF ++A ++ M+ G I + + +L A S+ G + + +
Sbjct: 414 DVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKL 473
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQ 127
++ K+GL LD FV+ S+ ++YG+ G++E+ L++ + +N LI +G
Sbjct: 474 HGRLLKNGLYLDVFVVTSLADMYGKC---GRLEDALSLFYQIP-RVNSVPWNTLIACHGF 529
Query: 128 AGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM-IDSGCYPDGG 186
G +K LF+ + +G+KPD +T+ + + A S L FE M D G P
Sbjct: 530 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLK 589
Query: 187 TAKVLLAACSNEDQTEQVTTVIRTM 211
++ Q E I++M
Sbjct: 590 HYGCMVDMYGRAGQLETALKFIKSM 614
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 82/201 (40%), Gaps = 10/201 (4%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G E + N L+D Y G L D + VF+ M + S ++ A+ +
Sbjct: 277 GLESELFVSNKLIDLYAEFGRLRDCQKVFDRM----YVRDLISWNSIIKAYELNEQPLRA 332
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLT-VMENGSCEADISTYNILIN 123
+ +M S ++ D L S+ ++ +LG V + G DI+ N ++
Sbjct: 333 ISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVV 392
Query: 124 RYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG-CY 182
Y + G +D +F L + DV++W + I Y++ +E++ M + G
Sbjct: 393 MYAKLGLVDSARAVFNWLPNT----DVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIA 448
Query: 183 PDGGTAKVLLAACSNEDQTEQ 203
+ GT +L ACS Q
Sbjct: 449 ANQGTWVSVLPACSQAGALRQ 469
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 80/170 (47%), Gaps = 14/170 (8%)
Query: 16 LVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSG 75
L+ Y R + +A +F++M M S ++S + ++GN + + N G
Sbjct: 191 LIHLYSRYKAVGNARILFDEMP----VRDMGSWNAMISGYCQSGNAKEALTLSN-----G 241
Query: 76 LK-LDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKM 134
L+ +D+ + S+L+ G F + + + E+++ N LI+ Y + G +
Sbjct: 242 LRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDC 301
Query: 135 EGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
+ +F ++ + D+++W S I AY + +R + +F+EM S PD
Sbjct: 302 QKVFDRMYVR----DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPD 347
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 7/176 (3%)
Query: 8 PDRAS---YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
PDR +N LV+ Y + DA VF M+ G+ + + +LSAF+ +G++
Sbjct: 222 PDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNG 281
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
I K+G D V N+++++YG+ + + M+ E D+ T+N ++
Sbjct: 282 RSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMD----ERDLFTWNSVLCV 337
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
+ G D LF+ + G++PD+VT T+ + + + EI MI SG
Sbjct: 338 HDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSG 393
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 89/222 (40%), Gaps = 22/222 (9%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G D N L+D YG++ +L +A ++FE M + T S +L G+
Sbjct: 292 GSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLF-TWNS---VLCVHDYCGDHDGT 347
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADIST----YNI 120
+ +M SG++ D L ++L GRL + E+ M S+ +N
Sbjct: 348 LALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNS 407
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
L++ Y + G + +F + K D +W I Y + L++F M +G
Sbjct: 408 LMDMYVKCGDLRDARMVFDSMRVK----DSASWNIMINGYGVQSCGELALDMFSCMCRAG 463
Query: 181 CYPDGGTAKVLLAACSNED----------QTEQVTTVIRTMD 212
PD T LL ACS+ Q E V ++ T D
Sbjct: 464 VKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSD 505
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 9/190 (4%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGIT-PTMKSHMVLLSAFSKTGNVSKCED 66
P+ YN ++ AY D +++ + R P + + + + G+ +
Sbjct: 71 PNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQ 130
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+ +CK G + N+++++Y + +V M E D+ ++N L++ Y
Sbjct: 131 VHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMY----ERDVISWNSLLSGYA 186
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGG 186
+ G + K +GLF L+ L +V+WT+ I Y+ YV ++ F EM +G PD
Sbjct: 187 RLGQMKKAKGLFHLM----LDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEI 242
Query: 187 TAKVLLAACS 196
+ +L +C+
Sbjct: 243 SLISVLPSCA 252
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 8/210 (3%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
E D S+N L+ Y R G + A+ +F M + T+ S ++S ++ G + D
Sbjct: 172 ERDVISWNSLLSGYARLGQMKKAKGLFHLM----LDKTIVSWTAMISGYTGIGCYVEAMD 227
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+M +G++ D L S+L +LG + + E N LI Y
Sbjct: 228 FFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYS 287
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGG 186
+ G I + LF + K DV++W++ I Y+ +E F EM + P+G
Sbjct: 288 KCGVISQAIQLFGQMEGK----DVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGI 343
Query: 187 TAKVLLAACSNEDQTEQVTTVIRTMDKDIK 216
T LL+ACS+ ++ M +D +
Sbjct: 344 TFLGLLSACSHVGMWQEGLRYFDMMRQDYQ 373
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 95/196 (48%), Gaps = 11/196 (5%)
Query: 4 MGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSK 63
G + D N L+ Y +G + A +F+ + + + ++ F + G+ S+
Sbjct: 132 FGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVV----TWTAMIDGFVRNGSASE 187
Query: 64 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLG--QFGKMEEVLTVMENGSCEADISTYNIL 121
+M K+G+ + + S+L G++ +FG+ L +E G + D+ + L
Sbjct: 188 AMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGL-YLETGRVKCDVFIGSSL 246
Query: 122 INRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGC 181
++ YG+ D + +F + S+ +VVTWT+ I Y + + + + + +FEEM+ S
Sbjct: 247 VDMYGKCSCYDDAQKVFDEMPSR----NVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDV 302
Query: 182 YPDGGTAKVLLAACSN 197
P+ T +L+AC++
Sbjct: 303 APNEKTLSSVLSACAH 318
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 75/154 (48%), Gaps = 6/154 (3%)
Query: 8 PDR--ASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
P R ++ L+ Y ++ + VFE+M + + P K+ +LSA + G + +
Sbjct: 267 PSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGR 326
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+ M K+ ++++T ++++LY + G +EE + V E E ++ T+ +IN +
Sbjct: 327 RVHCYMIKNSIEINTTAGTTLIDLYVKCGC---LEEAILVFERLH-EKNVYTWTAMINGF 382
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGA 159
G+ LF + S + P+ VT+ + + A
Sbjct: 383 AAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSA 416
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 6/157 (3%)
Query: 8 PDR--ASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
PDR ++N L+ Y + G +A +F DM++ G+ PT + LSA + G V + +
Sbjct: 235 PDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGK 294
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+G++LD + S+LN Y ++G E V M E D+ T+N++I+ Y
Sbjct: 295 QSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRM----FEKDVVTWNLIISGY 350
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSK 162
Q G ++ + QL+ + LK D VT + + A ++
Sbjct: 351 VQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAAR 387
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 99/222 (44%), Gaps = 31/222 (13%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNV----- 61
E D ++N+++ Y + G + DA + + M+ + + L+SA ++T N+
Sbjct: 337 EKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKE 396
Query: 62 ------------------------SKCEDILN--QMCKSGLKLDTFVLNSMLNLYGRLGQ 95
+KC I++ ++ S ++ D + N++L Y G
Sbjct: 397 VQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGL 456
Query: 96 FGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTS 155
G+ + M+ ++ T+N++I + G +D+ + +F + S G+ P++++WT+
Sbjct: 457 SGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTT 516
Query: 156 RIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSN 197
+ + + +M +SG P+ + V L+AC++
Sbjct: 517 MMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAH 558
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 105/251 (41%), Gaps = 47/251 (18%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
MQ G P+ ++N+++ + R G +++A+ +F M+ GI P + S +++ + G
Sbjct: 467 MQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGC 526
Query: 61 VSKCEDILNQMCKSGLKLDTFVLN------------------------------------ 84
+ L +M +SGL+ + F +
Sbjct: 527 SEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIET 586
Query: 85 SMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSK 144
S++++Y + G K E+V +++ N +I+ Y G + + L++ L
Sbjct: 587 SLVDMYAKCGDINKAEKVF----GSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGV 642
Query: 145 GLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID----SGCYPDGGTAKVLLAACSNEDQ 200
GLKPD +T T+ + A + + +EIF +++ C G LLA+ +
Sbjct: 643 GLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAG---E 699
Query: 201 TEQVTTVIRTM 211
TE+ +I M
Sbjct: 700 TEKALRLIEEM 710
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 90/195 (46%), Gaps = 1/195 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMK-RVGITPTMKSHMVLLSAFSKTG 59
M C+ S+N L++A + + E +F+++ ++ I P + S+ L+ G
Sbjct: 132 MPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKG 191
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
+ ++ +++++ GLK D N +L+ G+F + E++ M + + DI +YN
Sbjct: 192 SFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYN 251
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
+ ++M LF L LKPDV T+T+ I + + + ++E+ +
Sbjct: 252 ARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKN 311
Query: 180 GCYPDGGTAKVLLAA 194
GC P LL A
Sbjct: 312 GCRPLKFVFNSLLPA 326
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 79/155 (50%), Gaps = 4/155 (2%)
Query: 65 EDILNQMCK-SGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN 123
E+IL + K + + FV ++NLYGR+G F ++V M +C+ ++N L+N
Sbjct: 91 EEILEEQNKYPNMSKEGFVAR-IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLN 149
Query: 124 RYGQAGFIDKMEGLFQLLHSK-GLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCY 182
+ D +EG+F+ L K ++PDV ++ + I K + + + +E+ + G
Sbjct: 150 ACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLK 209
Query: 183 PDGGTAKVLLAACSNEDQTEQVTTV-IRTMDKDIK 216
PD T +LL + + E+ + R ++K++K
Sbjct: 210 PDHITFNILLHESYTKGKFEEGEQIWARMVEKNVK 244
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 15/218 (6%)
Query: 4 MGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSK 63
+ EPD ASYN L+ G +A A+ ++++ G+ P + +LL G +
Sbjct: 171 LSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEE 230
Query: 64 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTV---MENGSCEADISTYNI 120
E I +M + +K D N+ L G L K EE++++ ++ + D+ T+
Sbjct: 231 GEQIWARMVEKNVKRDIRSYNA--RLLG-LAMENKSEEMVSLFDKLKGNELKPDVFTFTA 287
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSK----KKLYVRCLEIFEE- 175
+I + G +D+ ++ + G +P + S + A K + Y C EIF +
Sbjct: 288 MIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKR 347
Query: 176 -MIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMD 212
++D + A L S +D+ E++ + +T D
Sbjct: 348 LLVDEAVLQEVVDA---LVKGSKQDEAEEIVELAKTND 382
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 93/200 (46%), Gaps = 1/200 (0%)
Query: 16 LVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC-KS 74
+++ YGR G +A+ VF++M T S LL+A + E I ++ K
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKL 171
Query: 75 GLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKM 134
++ D N+++ G F + ++ +EN + D T+NIL++ G ++
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEG 231
Query: 135 EGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAA 194
E ++ + K +K D+ ++ +R+ + + + +F+++ + PD T ++
Sbjct: 232 EQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKG 291
Query: 195 CSNEDQTEQVTTVIRTMDKD 214
+E + ++ T + ++K+
Sbjct: 292 FVSEGKLDEAITWYKEIEKN 311
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 9/173 (5%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDM---KRVGITPTMKSHMVLLSAFSKTGNVSK 63
+ DR SYN ++ Y ++G N+A VF + K V S ++L + S + K
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGK 307
Query: 64 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILIN 123
C I +Q+ + GL+ D V S++++Y + G+ + M+N ++ ++ +I
Sbjct: 308 C--IHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKN----KNVRSWTAMIA 361
Query: 124 RYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
YG G K LF + G++P+ +T+ S + A S L+V F M
Sbjct: 362 GYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAM 414
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 4 MGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSK 63
MG E D ++D Y + G + A F+ MK ++S +++ + G+ +K
Sbjct: 316 MGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK----NKNVRSWTAMIAGYGMHGHAAK 371
Query: 64 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENG-SCEADISTYNILI 122
++ M SG++ + S+L G + M+ E + Y ++
Sbjct: 372 ALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMV 431
Query: 123 NRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGA 159
+ G+AGF+ K L Q + +KPD + W+S + A
Sbjct: 432 DLLGRAGFLQKAYDLIQRMK---MKPDSIIWSSLLAA 465
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 16/191 (8%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D SYN ++D Y + G + A +F+ M MK+ + S S S DI
Sbjct: 186 DSVSYNSMIDGYVKCGLIVSARELFDLMPM-----EMKNLISWNSMISGYAQTSDGVDIA 240
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
+++ + D NSM++ Y + G+ + + VM D+ T+ +I+ Y +
Sbjct: 241 SKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMP----RRDVVTWATMIDGYAKL 296
Query: 129 GFIDKMEGLF-QLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM-IDSGCYPDGG 186
GF+ + LF Q+ H DVV + S + Y + K ++ LEIF +M +S PD
Sbjct: 297 GFVHHAKTLFDQMPHR-----DVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDT 351
Query: 187 TAKVLLAACSN 197
T ++L A +
Sbjct: 352 TLVIVLPAIAQ 362
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 7/212 (3%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVG-ITPTMKSHMVLLSAFSKTGNVSKC 64
CE D S+N+++D Y + GF NDA +F+ + G P + + LSA S+ G +
Sbjct: 219 CERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETG 278
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
I + S ++L+ V ++++Y + G +EE + V N + DI +N +I
Sbjct: 279 RWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS---LEEAVLVF-NDTPRKDIVAWNAMIAG 334
Query: 125 YGQAGFIDKMEGLFQLLHS-KGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM-IDSGCY 182
Y G+ LF + GL+P +T+ + A + L + IFE M + G
Sbjct: 335 YAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIK 394
Query: 183 PDGGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
P L++ Q ++ I+ M+ D
Sbjct: 395 PKIEHYGCLVSLLGRAGQLKRAYETIKNMNMD 426
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 11/125 (8%)
Query: 39 VGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGK 98
+GI P + + +V ++K G+V + + ++M + L T +M+ Y + G
Sbjct: 157 LGIDPYVATGLV--DVYAKGGDVVSAQKVFDRMPERSLVSST----AMITCYAKQGNV-- 208
Query: 99 MEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG-LKPDVVTWTSRI 157
E + + CE DI ++N++I+ Y Q GF + LFQ L ++G KPD +T + +
Sbjct: 209 --EAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAAL 266
Query: 158 GAYSK 162
A S+
Sbjct: 267 SACSQ 271
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 94/205 (45%), Gaps = 6/205 (2%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDM--KRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
D+ Y+ ++ Y + G DA +F M + I P + ++SA S+ GN S
Sbjct: 293 DKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTW 352
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+ + + + G+K+D + S+++LY + G F K ++ + + + D +Y+ +I G
Sbjct: 353 VESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLN----KKDTVSYSAMIMGCG 408
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGG 186
G + LF + K + P+VVT+T + AYS L + F M D P
Sbjct: 409 INGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSAD 468
Query: 187 TAKVLLAACSNEDQTEQVTTVIRTM 211
+++ + E+ +I++M
Sbjct: 469 HYGIMVDMLGRAGRLEEAYELIKSM 493
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 8/155 (5%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D S+ LV + + V+ DM GI P+ + +L A K N+ + I
Sbjct: 68 DSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIH 127
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
Q K+GL +V ++ LY RLG E+ + E + ++N L++ Y ++
Sbjct: 128 AQALKNGLCGCVYVQTGLVGLYSRLGYI----ELAKKAFDDIAEKNTVSWNSLLHGYLES 183
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKK 163
G +D+ +F + K D V+W I +Y+KK
Sbjct: 184 GELDEARRVFDKIPEK----DAVSWNLIISSYAKK 214
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 83/167 (49%), Gaps = 8/167 (4%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
E D +N L+ Y R G+ DA +F M + G +P+ + + LL + G VS+
Sbjct: 113 ERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRS 172
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+ KSGL+LD+ V N++++ Y + + G E + M++ S ++N +I Y
Sbjct: 173 VHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKS----TVSWNTMIGAYS 228
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKK----LYVRC 169
Q+G ++ +F+ + K ++ VT + + A+ + L V+C
Sbjct: 229 QSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKC 275
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 13/205 (6%)
Query: 14 NILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM-C 72
N L+ Y + +D E V +++ TP + + V+ S ++G S ++ +QM
Sbjct: 386 NGLITMYSK---FDDVETVLFLFEQLQETPLISWNSVI-SGCVQSGRASTAFEVFHQMML 441
Query: 73 KSGLKLDTFVLNSMLNLYGRLG--QFGKMEEVLTVMENGSCEADISTYNILINRYGQAGF 130
GL D + S+L +L GK T+ N E + T LI+ Y + G
Sbjct: 442 TGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCT--ALIDMYAKCGN 499
Query: 131 IDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKV 190
+ E +F+ + + P TW S I YS L R L + EM + G PD T
Sbjct: 500 EVQAESVFKSIKA----PCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLG 555
Query: 191 LLAACSNEDQTEQVTTVIRTMDKDI 215
+L+AC++ ++ R M K+
Sbjct: 556 VLSACNHGGFVDEGKICFRAMIKEF 580
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 81/168 (48%), Gaps = 2/168 (1%)
Query: 46 KSHMVLLSAFSKT-GNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLT 104
KS ++L+ + G+ + E + +M G+K D +SM++ Y + G K+ ++
Sbjct: 267 KSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFD 326
Query: 105 VMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLL-HSKGLKPDVVTWTSRIGAYSKK 163
M+ E D YN +++ +A F+ + L + + KG++P+VVT+ S I K
Sbjct: 327 RMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKA 386
Query: 164 KLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+ ++F+EM++ G +P T + ++ ++ +R M
Sbjct: 387 RKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKM 434
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 92/207 (44%), Gaps = 4/207 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKR-VGITPTMKSHMVLLSAFSKTG 59
M+ EPDR YN +V A +A F+++A + + M+ GI P + ++ L+ K
Sbjct: 328 MKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKAR 387
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
+ + + ++M + GL ++ + + R G+ ++ E+L M CE + TY
Sbjct: 388 KTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL-RTGE--EVFELLAKMRKMGCEPTVETYI 444
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
+LI + + D + L+ + K + PD+ ++ I ++EM D
Sbjct: 445 MLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDK 504
Query: 180 GCYPDGGTAKVLLAACSNEDQTEQVTT 206
G P+ ++ + S + EQ T
Sbjct: 505 GMRPNENVEDMIQSWFSGKQYAEQRIT 531
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 92/198 (46%), Gaps = 8/198 (4%)
Query: 16 LVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSG 75
L+D Y + G + DA FE M T + +++ ++ G + +L M SG
Sbjct: 265 LIDMYSKCGDIEDARCAFECMPE----KTTVAWNNVIAGYALHGYSEEALCLLYDMRDSG 320
Query: 76 LKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKME 135
+ +D F L+ M+ + +L + ++ + E++I L++ Y + G +D
Sbjct: 321 VSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTAR 380
Query: 136 GLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAAC 195
+F L K ++++W + +G Y+ +++FE+MI + P+ T +L+AC
Sbjct: 381 YVFDKLPRK----NIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSAC 436
Query: 196 SNEDQTEQVTTVIRTMDK 213
+ +EQ + +M +
Sbjct: 437 AYSGLSEQGWEIFLSMSE 454
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 95/209 (45%), Gaps = 8/209 (3%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C+ D S+N+++ Y R ++ + +M+R ++PT + +++LSA SK + C+
Sbjct: 197 CKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCK 256
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+ + + + + N+++N Y G+ + M+ D+ ++ ++ Y
Sbjct: 257 RVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMK----ARDVISWTSIVKGY 312
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
+ G + F + + D ++WT I Y + + LEIF EM +G PD
Sbjct: 313 VERGNLKLARTYFDQMPVR----DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDE 368
Query: 186 GTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
T +L AC++ E + +DK+
Sbjct: 369 FTMVSVLTACAHLGSLEIGEWIKTYIDKN 397
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 81/206 (39%), Gaps = 39/206 (18%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
DR S+ I++D Y RAG N++ +F +M+ G+ P
Sbjct: 332 DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIP------------------------- 366
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
D F + S+L LG E + T ++ + D+ N LI+ Y +
Sbjct: 367 ----------DEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKC 416
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTA 188
G +K + +F + + D TWT+ + + +++F +M D PD T
Sbjct: 417 GCSEKAQKVFHDMDQR----DKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITY 472
Query: 189 KVLLAACSNEDQTEQVTTVIRTMDKD 214
+L+AC++ +Q M D
Sbjct: 473 LGVLSACNHSGMVDQARKFFAKMRSD 498
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 97/206 (47%), Gaps = 5/206 (2%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
+PD S+NI + A R+ + + +F+ M + I P + + +LS SK +++
Sbjct: 507 QPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSS 566
Query: 67 ILNQMCKSGLKL-DTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
I + K+ DTFV N ++++YG+ G + V+ V E E ++ T+ LI+
Sbjct: 567 IHGLITKTDFSCADTFVCNVLIDMYGKCGS---IRSVMKVFEETR-EKNLITWTALISCL 622
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
G G+ + F+ S G KPD V++ S + A + + +F++M D G P+
Sbjct: 623 GIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEM 682
Query: 186 GTAKVLLAACSNEDQTEQVTTVIRTM 211
+ + + ++ +IR M
Sbjct: 683 DHYRCAVDLLARNGYLKEAEHLIREM 708
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 91/222 (40%), Gaps = 41/222 (18%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAE------------------------------AVFE 34
GCE N L+D Y + G L D+ ++F
Sbjct: 346 GCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPICLSLFL 405
Query: 35 DMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLG 94
M ++G PT + S K+ V++ + + + + + G + + +VL+S++ Y +
Sbjct: 406 QMLQMGFRPTEYT----FSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAK-N 460
Query: 95 QFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWT 154
Q M + L +++ S + NI+ Y + G + L L +PD V+W
Sbjct: 461 QL--MNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE----QPDTVSWN 514
Query: 155 SRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACS 196
I A S+ + +E+F+ M+ S PD T +L+ CS
Sbjct: 515 IAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCS 556
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 9/207 (4%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM 71
++N ++ G GFL + F ++ R+G + T S + +L S ++ + +
Sbjct: 182 TWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSA 241
Query: 72 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
K GL + V+NS+++ YG+ G E + + GS DI ++N +I ++
Sbjct: 242 TKKGLDCEISVVNSLISAYGKCGNTHMAERMF--QDAGS--WDIVSWNAIICATAKSENP 297
Query: 132 DKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVL 191
K LF + G P+ T+ S +G S +L +I +I +GC L
Sbjct: 298 LKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNAL 357
Query: 192 L---AACSNEDQTEQVTTVIRTMDKDI 215
+ A C N + + IR DK+I
Sbjct: 358 IDFYAKCGNLEDSRLCFDYIR--DKNI 382
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 83/196 (42%), Gaps = 9/196 (4%)
Query: 14 NILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCK 73
N L+ AYG+ G + AE +F+D I S ++ A +K+ N K + M +
Sbjct: 254 NSLISAYGKCGNTHMAERMFQDAGSWDIV----SWNAIICATAKSENPLKALKLFVSMPE 309
Query: 74 SGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDK 133
G + S+L + + ++ ++ CE I N LI+ Y + G ++
Sbjct: 310 HGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLED 369
Query: 134 MEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLA 193
F + K ++V W + + Y+ K + CL +F +M+ G P T L
Sbjct: 370 SRLCFDYIRDK----NIVCWNALLSGYANKDGPI-CLSLFLQMLQMGFRPTEYTFSTALK 424
Query: 194 ACSNEDQTEQVTTVIR 209
+C + + + ++R
Sbjct: 425 SCCVTELQQLHSVIVR 440
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 7/140 (5%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
E ++ S+N ++ Y + G ++ A VF +M+ G P + LLS S +V
Sbjct: 77 ERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASL--DVRAGTQ 134
Query: 67 ILNQMCKSGLKL-DTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+ K GL + D FV +L LYGRL E+V M S E T+N +++
Sbjct: 135 LHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLE----TWNHMMSLL 190
Query: 126 GQAGFIDKMEGLFQLLHSKG 145
G GF+ + F+ L G
Sbjct: 191 GHRGFLKECMFFFRELVRMG 210
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 4 MGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSK 63
+G E D + L+ Y + G + A +F+++ S ++S +S+ G
Sbjct: 161 VGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTV----SWNSMISGYSEAGYAKD 216
Query: 64 CEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQF--GKMEEVLTVMENGSCEADISTY--N 119
D+ +M + G + D L SML LG G++ E + + + + +ST+ +
Sbjct: 217 AMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITK----KIGLSTFLGS 272
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
LI+ YG+ G +D +F + +K D V WT+ I YS+ ++F EM +
Sbjct: 273 KLISMYGKCGDLDSARRVFNQM----IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKT 328
Query: 180 GCYPDGGTAKVLLAACSN 197
G PD GT +L+AC +
Sbjct: 329 GVSPDAGTLSTVLSACGS 346
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 17/158 (10%)
Query: 40 GITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKM 99
G+T T H LS + + M SGLK D F N + +L + G
Sbjct: 105 GLTNTWNDHEAALSLYRR-------------MKFSGLKPDKFTYNFVFIACAKLEEIGVG 151
Query: 100 EEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGA 159
V + + E D+ + LI Y + G + LF + + D V+W S I
Sbjct: 152 RSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITER----DTVSWNSMISG 207
Query: 160 YSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSN 197
YS+ +++F +M + G PD T +L ACS+
Sbjct: 208 YSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSH 245
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
DR ++ ++ Y + G ++A +F +M++ G++P + +LSA G + + I
Sbjct: 298 DRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIE 357
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
+ L+ + +V ++++YG+ G++EE L V E + + +T+N +I Y
Sbjct: 358 THASELSLQHNIYVATGLVDMYGKC---GRVEEALRVFEAMPVKNE-ATWNAMITAYAHQ 413
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
G + LF + + P +T+ + A L + F EM
Sbjct: 414 GHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEM 458
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 4/170 (2%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
EPD A++N L+ AY + ++ E V R+ + P S + L+ + + G +
Sbjct: 178 EPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVW 237
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+ K+ L L+ FV S+++LY + G +V M + D+S YN +I
Sbjct: 238 AHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMS----QRDVSCYNAMIRGLA 293
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
GF + L++ L S+GL PD T+ I A S L L+IF M
Sbjct: 294 VHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSM 343
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 14/203 (6%)
Query: 14 NILVDAYGRAGFLNDAEAVFEDMKRV-GITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 72
N LVDAY + ++ A V MKR IT T L++ F++ G ++N M
Sbjct: 466 NSLVDAYASSRKVDYAWNVIRSMKRRDNITYTS-----LVTRFNELGKHEMALSVINYMY 520
Query: 73 KSGLKLDTFVLNSMLNLYGRLGQF--GKMEEVLTVMENGSCEADISTYNILINRYGQAGF 130
G+++D L ++ LG GK +V S A S N L++ Y + G
Sbjct: 521 GDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAA--SVLNSLVDMYSKCGS 578
Query: 131 IDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKV 190
++ + +F+ + + PDVV+W + + L FEEM PD T +
Sbjct: 579 LEDAKKVFEEIAT----PDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLI 634
Query: 191 LLAACSNEDQTEQVTTVIRTMDK 213
LL+ACSN T+ + M K
Sbjct: 635 LLSACSNGRLTDLGLEYFQVMKK 657
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 25/222 (11%)
Query: 2 QHMGCEPDRASY-------NILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSA 54
+H+ C ++ + N LVD Y + G L DA+ VFE++ TP + S L+S
Sbjct: 548 KHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIA----TPDVVSWNGLVSG 603
Query: 55 FSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNL--YGRLGQFGKMEEVLTVMEN-GSC 111
+ G +S +M + D+ +L+ GRL G E VM+ +
Sbjct: 604 LASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGL--EYFQVMKKIYNI 661
Query: 112 EADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLE 171
E + Y L+ G+AG +++ G+ + +H LKP+ + + + + A Y L
Sbjct: 662 EPQVEHYVHLVGILGRAGRLEEATGVVETMH---LKPNAMIFKTLLRACR----YRGNLS 714
Query: 172 IFEEMIDSG--CYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
+ E+M + G P +LLA +E ++ R +
Sbjct: 715 LGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNL 756
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 93/204 (45%), Gaps = 8/204 (3%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D S+N L+ Y +G + +A+ +F++MK I S M+++S ++ G + +
Sbjct: 350 DLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNIL----SWMIMISGLAENGFGEEGLKLF 405
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
+ M + G + + + + LG + ++ + ++ +S N LI Y +
Sbjct: 406 SCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKC 465
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTA 188
G +++ +F+ + D V+W + I A + ++++EEM+ G PD T
Sbjct: 466 GVVEEARQVFRTMPCL----DSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITL 521
Query: 189 KVLLAACSNEDQTEQVTTVIRTMD 212
+L ACS+ +Q +M+
Sbjct: 522 LTVLTACSHAGLVDQGRKYFDSME 545
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 94/193 (48%), Gaps = 19/193 (9%)
Query: 8 PDR--ASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
P+R S+N +V A + G +++A +FE M R + S ++ +K G V +
Sbjct: 167 PERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVV----SWTAMVDGLAKNGKVDEAR 222
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+ + M + + N+M+ Y + + + +++ VM E D +++N +I +
Sbjct: 223 RLFDCMPERNI----ISWNAMITGYAQNNRIDEADQLFQVMP----ERDFASWNTMITGF 274
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI-DSGCYPD 184
+ ++K GLF + K +V++WT+ I Y + K L +F +M+ D P+
Sbjct: 275 IRNREMNKACGLFDRMPEK----NVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPN 330
Query: 185 GGTAKVLLAACSN 197
GT +L+ACS+
Sbjct: 331 VGTYVSILSACSD 343
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 85/179 (47%), Gaps = 5/179 (2%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVG-ITPTMKSHMVLLSAFSKTGNVSKCE 65
E + S+ ++ Y +A VF M R G + P + +++ +LSA S + + +
Sbjct: 292 EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQ 351
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENG-SCEADISTYNILINR 124
I + KS + + V +++LN+Y + G+ ++ +NG C+ D+ ++N +I
Sbjct: 352 QIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMF---DNGLVCQRDLISWNSMIAV 408
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYP 183
Y G + ++ + G KP VT+ + + A S L + +E F++++ P
Sbjct: 409 YAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLP 467
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 95/192 (49%), Gaps = 12/192 (6%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMK-RVGITPTMKSHMVLLSAFSKTGNVSKCEDI 67
D+ S+ ++D Y AG ++ A +F+ + + G+T T V++S + ++ +
Sbjct: 399 DKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWT-----VMISGLVQNELFAEAASL 453
Query: 68 LNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSC--EADISTYNILINRY 125
L+ M + GLK + +L+ G + + + V+ + + D+ N L++ Y
Sbjct: 454 LSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMY 513
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
+ G I+ +F +K ++ D V+W S I S L + L +F+EM+DSG P+
Sbjct: 514 AKCGAIEDAYEIF----AKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNS 569
Query: 186 GTAKVLLAACSN 197
T +L+ACS+
Sbjct: 570 VTFLGVLSACSH 581
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 6/172 (3%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
+ D ++ +++ + +A ++ DM R G+ P ++ VLLS+ T N+ + +
Sbjct: 428 DKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKH 487
Query: 67 ILNQMCKSG--LKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
I + K+ D + NS++++Y + G E+ M + D ++N +I
Sbjct: 488 IHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM----VQKDTVSWNSMIMG 543
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
G DK LF+ + G KP+ VT+ + A S L R LE+F+ M
Sbjct: 544 LSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAM 595
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 16/161 (9%)
Query: 51 LLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGS 110
L+ ++ +G ++ + +LN+ +F L S + R + G +E T+ E
Sbjct: 345 LVHMYASSGLIASAQSLLNE---------SFDLQSCNIIINRYLKNGDLERAETLFERVK 395
Query: 111 CEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCL 170
D ++ +I+ Y +AG + + GLFQ LH K D VTWT I + +L+
Sbjct: 396 SLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDK----DGVTWTVMISGLVQNELFAEAA 451
Query: 171 EIFEEMIDSGCYPDGGTAKVLLA---ACSNEDQTEQVTTVI 208
+ +M+ G P T VLL+ A SN DQ + + VI
Sbjct: 452 SLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVI 492
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 94/212 (44%), Gaps = 2/212 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M GC P S+N +++ A ++ +F ++G+ +L+ ++GN
Sbjct: 158 MPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGN 217
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ +L++ + + + + ++ + G+F + ++L ME E D T+NI
Sbjct: 218 LEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNI 277
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSG 180
LI+ + G +++ L + + KG +P+ T+ + KK + E+ +MI G
Sbjct: 278 LISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWG 337
Query: 181 CYPDG-GTAKVLLAACSNEDQTEQVTTVIRTM 211
P K++L C + E + V+R M
Sbjct: 338 MRPSFLSYKKMVLGLCETKSVVE-MDWVLRQM 368
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 2/181 (1%)
Query: 13 YNILVDAYGR-AGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM 71
YN L+ YG AG +N A + M G P+ KS +L+ + I
Sbjct: 135 YN-LMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSA 193
Query: 72 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
K G+++D LN ++ G ++L ++ T++ LI + G
Sbjct: 194 PKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKF 253
Query: 132 DKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVL 191
++ L + + + ++PD +T+ I KK +++ E M GC P+ GT + +
Sbjct: 254 EEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEV 313
Query: 192 L 192
L
Sbjct: 314 L 314
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 2/196 (1%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G +PD+ +Y ILV+ + AG + +A+ ++M R G P + +L+ G
Sbjct: 208 MIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGY 267
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGK-MEEVLTVMENGSCEADISTYN 119
+ ++++++M K G D N ++ + G+ +E T + G C DI TY
Sbjct: 268 LESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLC-VDIDTYK 326
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
LI + G ID+ L G KP + I + ++ F +M
Sbjct: 327 TLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVK 386
Query: 180 GCYPDGGTAKVLLAAC 195
P+ +L+ C
Sbjct: 387 AHPPNRPVYTMLITMC 402
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 79/188 (42%), Gaps = 10/188 (5%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M G P ++L++ AG+L A+ + M + G P +++ +L+ A SK+G
Sbjct: 243 MSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGE 302
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEAD-----I 115
V C ++ CK GL +D +++ L + + GK++E ++ N C D
Sbjct: 303 VEFCIEMYYTACKLGLCVD---IDTYKTLIPAVSKIGKIDEAFRLLNN--CVEDGHKPFP 357
Query: 116 STYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEE 175
S Y +I + G D F + K P+ +T I + +V E
Sbjct: 358 SLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVE 417
Query: 176 MIDSGCYP 183
M + G P
Sbjct: 418 MTEMGLVP 425
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 86/199 (43%), Gaps = 9/199 (4%)
Query: 4 MGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSK 63
+GC+ YN L+ A + A A+ M R G+ P +++ +L++ + G + +
Sbjct: 176 LGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKE 235
Query: 64 CEDILNQMCKSGLKLDT----FVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
++ L++M + G ++ +LN G +E+++ M G DI T+N
Sbjct: 236 AQEFLDEMSRRGFNPPARGRDLLIEGLLN----AGYLESAKEMVSKMTKGGFVPDIQTFN 291
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
ILI ++G ++ ++ GL D+ T+ + I A SK + ++
Sbjct: 292 ILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVED 351
Query: 180 GCYPDGGT-AKVLLAACSN 197
G P A ++ C N
Sbjct: 352 GHKPFPSLYAPIIKGMCRN 370
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 77/183 (42%), Gaps = 1/183 (0%)
Query: 15 ILVDAYGRAGFLNDAEAVFEDM-KRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCK 73
+++ YG+ G ++ A +F + K +G T+ + LL A ++ +M +
Sbjct: 151 FIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIR 210
Query: 74 SGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDK 133
GLK D ++N + G+ + +E L M ++LI AG+++
Sbjct: 211 KGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLES 270
Query: 134 MEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLA 193
+ + + G PD+ T+ I A SK C+E++ G D T K L+
Sbjct: 271 AKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIP 330
Query: 194 ACS 196
A S
Sbjct: 331 AVS 333
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 15/174 (8%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVG-ITPTMKSHMVLLSA---FSKTGNVS 62
E + ++ ++D Y +AGF D +F M++ G + + V+ A F + S
Sbjct: 236 ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGS 295
Query: 63 KCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILI 122
+ ++++M L+ D F+ NS++++Y +LG G+ + V VM+N D ++N LI
Sbjct: 296 QIHGLVSRM---PLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKN----KDSVSWNSLI 348
Query: 123 NRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
Q I + LF+ + K D+V+WT I +S K +C+E+F M
Sbjct: 349 TGLVQRKQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEISKCVELFGMM 398
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
E D ++ ++ A+ G+ +A F M + + P + +LSA + ++ +
Sbjct: 400 EKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQ 459
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
I ++ K + D V NS++++Y + G ++ + + E +I +YN +I+ Y
Sbjct: 460 IHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS----EPNIVSYNTMISGYS 515
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGA 159
GF K LF +L S G +P+ VT+ + + A
Sbjct: 516 YNGFGKKALKLFSMLESSGKEPNGVTFLALLSA 548
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 8/210 (3%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G E D +ILVD + G + DA +F + I + L+ K+G S
Sbjct: 372 GYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDII----AFSGLIRGCVKSGFNSLA 427
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
+ ++ K GL D F+++++L + L G +++ + E++ T L++
Sbjct: 428 FYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDM 487
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
Y + G ID LF + L+ DVV+WT I + + F +MI+ G P+
Sbjct: 488 YVKCGEIDNGVVLFDGM----LERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPN 543
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTMDKD 214
T LL+AC + E+ + + TM +
Sbjct: 544 KVTFLGLLSACRHSGLLEEARSTLETMKSE 573
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 36/243 (14%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAF---SK 57
M G PD +Y +L+D Y + G ++A V +DM++ I P ++ V++ A K
Sbjct: 252 MLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKK 311
Query: 58 TGNVSK------------------------CED--------ILNQMCKSGLKLDTFVLNS 85
+G CED + +M K+ D +L++
Sbjct: 312 SGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLST 371
Query: 86 MLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKG 145
+++ + G+ + ++ E GS + + TYN LI + G + + L+ ++ +
Sbjct: 372 LIHWLCKEGRVTEARKLFDEFEKGSIPS-LLTYNTLIAGMCEKGELTEAGRLWDDMYERK 430
Query: 146 LKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVT 205
KP+ T+ I SK + + EEM++ GC+P+ T +L + E
Sbjct: 431 CKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAM 490
Query: 206 TVI 208
++
Sbjct: 491 KIV 493
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/212 (18%), Positives = 86/212 (40%)
Query: 2 QHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNV 61
+ G P+ + N+LV A + + A V +++ +G+ P + ++ +L + G++
Sbjct: 183 ESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDM 242
Query: 62 SKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNIL 121
+ +L +M G D +++ Y +LG+F + V+ ME E + TY ++
Sbjct: 243 ESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVM 302
Query: 122 INRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGC 181
I + + +F + + PD I A + ++ +M+ + C
Sbjct: 303 IRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNC 362
Query: 182 YPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
PD L+ E + + + +K
Sbjct: 363 MPDNALLSTLIHWLCKEGRVTEARKLFDEFEK 394
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 91/204 (44%), Gaps = 1/204 (0%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKR-VGITPTMKSHMVLLSAFSKTGNVSKCEDILNQ 70
S N L++ + + A+F++ K GITP + + +L+ A K ++ +L++
Sbjct: 157 SLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDE 216
Query: 71 MCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGF 130
+ GL + ++L Y G + VL M + D +TY +L++ Y + G
Sbjct: 217 IPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGR 276
Query: 131 IDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKV 190
+ + + ++P+ VT+ I A K+K +F+EM++ PD
Sbjct: 277 FSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCK 336
Query: 191 LLAACSNEDQTEQVTTVIRTMDKD 214
++ A + + ++ + R M K+
Sbjct: 337 VIDALCEDHKVDEACGLWRKMLKN 360
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 95/204 (46%), Gaps = 8/204 (3%)
Query: 11 ASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQ 70
+++N ++ Y + G +++A+ +F+ M + P S +++ +S++G+ + + Q
Sbjct: 344 STWNTMITGYAQCGKISEAKNLFDKMPKR--DPV--SWAAMIAGYSQSGHSFEALRLFVQ 399
Query: 71 MCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGF 130
M + G +L+ +S L+ + +++ + G E N L+ Y + G
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 131 IDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKV 190
I++ LF+ + K D+V+W + I YS+ L FE M G PD T
Sbjct: 460 IEEANDLFKEMAGK----DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVA 515
Query: 191 LLAACSNEDQTEQVTTVIRTMDKD 214
+L+ACS+ ++ TM +D
Sbjct: 516 VLSACSHTGLVDKGRQYFYTMTQD 539
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 16/154 (10%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
+ D +N+ + +Y R G N+A VF+ M R S+ ++S + + G
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSV----SYNGMISGYLRNGEFELARK 116
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+ ++M + D N M+ Y R GK E+ +M E D+ ++N +++ Y
Sbjct: 117 LFDEMPER----DLVSWNVMIKGYVRNRNLGKARELFEIMP----ERDVCSWNTMLSGYA 168
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAY 160
Q G +D +F + K + V+W + + AY
Sbjct: 169 QNGCVDDARSVFDRMPEK----NDVSWNALLSAY 198
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 88/191 (46%), Gaps = 20/191 (10%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMK--SHMVLLSAFSKTGNVSKCED 66
D S+N ++ Y ++G +++A +F++ +P + ++S + + V + +
Sbjct: 249 DVVSWNTIITGYAQSGKIDEARQLFDE------SPVQDVFTWTAMVSGYIQNRMVEEARE 302
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+ ++M + + N+ML Y + + +E+ VM C ++ST+N +I Y
Sbjct: 303 LFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVM---PCR-NVSTWNTMITGYA 354
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGG 186
Q G I + + LF K K D V+W + I YS+ L +F +M G +
Sbjct: 355 QCGKISEAKNLF----DKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRS 410
Query: 187 TAKVLLAACSN 197
+ L+ C++
Sbjct: 411 SFSSALSTCAD 421
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 16/170 (9%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
E D S+N ++ Y + G ++DA +VF+ M S LLSA+ + SK E
Sbjct: 154 ERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDV----SWNALLSAYVQN---SKME- 205
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+ C + + L S L G + K+ E ++ + D+ ++N +I Y
Sbjct: 206 ---EACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVR-DVVSWNTIITGYA 261
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
Q+G ID+ LF + DV TWT+ + Y + ++ E+F++M
Sbjct: 262 QSGKIDEARQLFD----ESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM 307
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 5/177 (2%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D S+ ++ Y ++G +A +F M+R G S LS + + + +
Sbjct: 373 DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLH 432
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
++ K G + FV N++L +Y + G + ++ M DI ++N +I Y +
Sbjct: 433 GRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAG----KDIVSWNTMIAGYSRH 488
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI-DSGCYPD 184
GF + F+ + +GLKPD T + + A S L + + F M D G P+
Sbjct: 489 GFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPN 545
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D S+N ++ Y R GF A FE MKR G+ P + + +LSA S TG V K
Sbjct: 474 DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYF 533
Query: 69 NQMCKS-GLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILI 122
M + G+ ++ M++L GR G +E+ +M+N E D + + L+
Sbjct: 534 YTMTQDYGVMPNSQHYACMVDLLGRAGL---LEDAHNLMKNMPFEPDAAIWGTLL 585
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 9/202 (4%)
Query: 16 LVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSG 75
L+DAY + G + +A VF + I + +L+ +++TG + ++ K G
Sbjct: 434 LLDAYVKLGKVEEAAKVFSGIDDKDIV----AWSAMLAGYAQTGETEAAIKMFGELTKGG 489
Query: 76 LKLDTFVLNSMLNLYGRL-GQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKM 134
+K + F +S+LN+ G+ ++ ++ + + L+ Y + G I+
Sbjct: 490 IKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESA 549
Query: 135 EGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAA 194
E +F+ K D+V+W S I Y++ ++ L++F+EM DG T + AA
Sbjct: 550 EEVFKRQREK----DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAA 605
Query: 195 CSNEDQTEQVTTVIRTMDKDIK 216
C++ E+ M +D K
Sbjct: 606 CTHAGLVEEGEKYFDIMVRDCK 627
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 8/161 (4%)
Query: 16 LVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSG 75
LVD Y + D VF++MK + + L+S +++ + + +M G
Sbjct: 134 LVDTYMKGSNFKDGRKVFDEMKERNVV----TWTTLISGYARNSMNDEVLTLFMRMQNEG 189
Query: 76 LKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKME 135
+ ++F + L + G G+ +V TV+ + I N LIN Y + G + K
Sbjct: 190 TQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKAR 249
Query: 136 GLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
LF K VVTW S I Y+ L + L +F M
Sbjct: 250 ILFDKTEVKS----VVTWNSMISGYAANGLDLEALGMFYSM 286
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 77/155 (49%), Gaps = 8/155 (5%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
+ +GC + S+ ++ + + +A +F +MKR G+ P ++ V+L+A
Sbjct: 353 FKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP---- 408
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V ++ Q+ K+ + + V ++L+ Y +L GK+EE V +G + DI ++
Sbjct: 409 VISPSEVHAQVVKTNYERSSTVGTALLDAYVKL---GKVEEAAKVF-SGIDDKDIVAWSA 464
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTS 155
++ Y Q G + +F L G+KP+ T++S
Sbjct: 465 MLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSS 499
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 10/198 (5%)
Query: 16 LVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN-VSKCEDILNQMCKS 74
LV+AY + G L +A + E K+ + S L++ FS+ N S DI M +
Sbjct: 255 LVNAYVKCGSLANAWKLHEGTKK----RDLLSCTALITGFSQQNNCTSDAFDIFKDMIRM 310
Query: 75 GLKLDTFVLNSMLNLYGRLGQFGKMEEVLT-VMENGSCEADISTYNILINRYGQAGFIDK 133
K+D V++SML + + ++ +++ D++ N LI+ Y ++G I+
Sbjct: 311 KTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIED 370
Query: 134 MEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLA 193
F+ + K DV +WTS I Y + + + ++++ M P+ T LL+
Sbjct: 371 AVLAFEEMKEK----DVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLS 426
Query: 194 ACSNEDQTEQVTTVIRTM 211
ACS+ QTE + TM
Sbjct: 427 ACSHTGQTELGWKIYDTM 444
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 8/168 (4%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D S+ ++ + R G+ DA +F++M R + ++ +L + G + + I
Sbjct: 77 DVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIH 136
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
+ K + V +++L+LY R G KMEE ++ E D+ ++N +I+ Y
Sbjct: 137 GSVEKGNCAGNLIVRSALLSLYARCG---KMEEARLQFDSMK-ERDLVSWNAMIDGYTAN 192
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
D LFQL+ ++G KPD T+ G+ + + V+CLEI E+
Sbjct: 193 ACADTSFSLFQLMLTEGKKPDCFTF----GSLLRASIVVKCLEIVSEL 236
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 81/181 (44%), Gaps = 8/181 (4%)
Query: 14 NILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCK 73
++L+D Y + G + A +F+ + + + S ++S FS+ G + +M +
Sbjct: 51 DMLIDLYLKQGDVKHARKLFDRISKRDVV----SWTAMISRFSRCGYHPDALLLFKEMHR 106
Query: 74 SGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDK 133
+K + F S+L LG + ++ +E G+C ++ + L++ Y + G +++
Sbjct: 107 EDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEE 166
Query: 134 MEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLA 193
F + + D+V+W + I Y+ +F+ M+ G PD T LL
Sbjct: 167 ARLQFDSMKER----DLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLR 222
Query: 194 A 194
A
Sbjct: 223 A 223
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 7/180 (3%)
Query: 16 LVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSG 75
L D Y R GFLN A VF+ ++R P S V+++ + G + + +QM SG
Sbjct: 311 LCDMYARCGFLNSARRVFDQIER----PDTASWNVIIAGLANNGYADEAVSVFSQMRSSG 366
Query: 76 LKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKME 135
D L S+L + + ++ + + AD++ N L+ Y F +
Sbjct: 367 FIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMY---TFCSDLY 423
Query: 136 GLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAAC 195
F L D V+W + + A + + V L +F+ M+ S C PD T LL C
Sbjct: 424 CCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGC 483
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 73 KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFID 132
K+GL + F+ N ++++Y + G G+ + M+N D+ +++ LI Y Q+GF +
Sbjct: 501 KTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDN----RDVVSWSTLIVGYAQSGFGE 556
Query: 133 KMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
+ LF+ + S G++P+ VT+ + A S L L+++ M
Sbjct: 557 EALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATM 600
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 85/185 (45%), Gaps = 10/185 (5%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITP-----TMKSHMVLLSAFSKTGN 60
C P N+L AG LND + + V I P + ++ L AF T +
Sbjct: 102 CLPISVFKNLL----AAAGELNDMKLSCRVFREVLILPGKEPLSSDCYLNLARAFINTDD 157
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ +L ++ +S L V+N ++ + Q K+ +L M+ C+ D+ TYN
Sbjct: 158 CTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNS 217
Query: 121 LINRYGQAGFIDKMEGLFQLLHSK-GLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
+++ G+AG ++++ G+ + + +++T+ + + K + CL I+ EM+
Sbjct: 218 VLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQC 277
Query: 180 GCYPD 184
G PD
Sbjct: 278 GIEPD 282
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
Query: 51 LLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVM-ENG 109
++ AF++T + K IL +M + K D NS+L++ GR G ++ VL+ M E+
Sbjct: 183 IIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDC 242
Query: 110 SCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRC 169
S +I TYN ++N +A D ++ + G++PD++++T+ I + +
Sbjct: 243 SVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKES 302
Query: 170 LEIFEEMIDSGCYPDGGTAKVLL 192
L +F+EM P + L+
Sbjct: 303 LRLFDEMKQRQIRPSVYVYRALI 325
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKR-VGITPTMKSHMVLLSAFSKTG 59
M+ C+PD +YN ++D GRAG +N+ V MK ++ + ++ +L+ K
Sbjct: 203 MKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKAC 262
Query: 60 NVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
C I N+M + G++ D ++++ GR G + + M+ + Y
Sbjct: 263 RFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYR 322
Query: 120 ILINRYGQAG 129
LI+ ++G
Sbjct: 323 ALIDCLKKSG 332
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 89/191 (46%), Gaps = 7/191 (3%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
E D ++N ++ AY + L+DAE +F R S L+S + K+G+ + +
Sbjct: 56 ERDEFTWNTMIVAYSNSRRLSDAEKLF----RSNPVKNTISWNALISGYCKSGSKVEAFN 111
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+ +M G+K + + L S+L + L + E++ + D++ N L+ Y
Sbjct: 112 LFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYA 171
Query: 127 QAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGG 186
Q I + E LF+ + + + VTWTS + YS+ + +E F ++ G +
Sbjct: 172 QCKRISEAEYLFETMEGE---KNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQY 228
Query: 187 TAKVLLAACSN 197
T +L AC++
Sbjct: 229 TFPSVLTACAS 239
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 83/206 (40%), Gaps = 8/206 (3%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
E D S+ LV G ++A +F +M+ GITP +LSA ++ + +
Sbjct: 392 EKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQ 451
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+ KSG V NS++ +Y + G + ME D+ T+ LI Y
Sbjct: 452 VHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSME----IRDLITWTCLIVGYA 507
Query: 127 QAGFIDKMEGLFQLLHS-KGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDG 185
+ G ++ + F + + G+ P + I + + +V+ ++ +M PD
Sbjct: 508 KNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQM---EVEPDA 564
Query: 186 GTAKVLLAACSNEDQTEQVTTVIRTM 211
K +LAA E +T+
Sbjct: 565 TVWKAILAASRKHGNIENGERAAKTL 590
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 6/204 (2%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGIT-PTMKSHMVLLSAFSKTGNVSKCEDILNQM 71
+N L+ Y G A +++ +M+ G+ P ++ L+ A + +V E I + +
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 72 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
+SG +V NS+L+LY G +V M E D+ +N +IN + + G
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMP----EKDLVAWNSVINGFAENGKP 203
Query: 132 DKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVL 191
++ L+ ++SKG+KPD T S + A +K + MI G + ++ VL
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 263
Query: 192 LAACSNEDQTEQVTTVIRTM-DKD 214
L + + E+ T+ M DK+
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDKN 287
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 5/171 (2%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
E D ++N +++ + G +A A++ +M GI P + + LLSA +K G ++ +
Sbjct: 184 EKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKR 243
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYG 126
+ M K GL + N +L+LY R G++EE T+ + + +S + LI
Sbjct: 244 VHVYMIKVGLTRNLHSSNVLLDLYARC---GRVEEAKTLFDEMVDKNSVS-WTSLIVGLA 299
Query: 127 QAGFIDKMEGLFQLLHS-KGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEM 176
GF + LF+ + S +GL P +T+ + A S + E F M
Sbjct: 300 VNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRM 350
>AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926110-8927722 FORWARD
LENGTH=490
Length = 490
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 19/210 (9%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 72
Y L++ Y L+ AE VF++MK +G + V+L+ + +TG + E +L +M
Sbjct: 142 YGALLNCYASKKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREME 201
Query: 73 KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEA------DISTYNILINRYG 126
+K D F +N+ L+ Y + ME+ L CEA D TY N Y
Sbjct: 202 DETVKPDIFTVNTRLHAYSVVSDVEGMEKFLM-----RCEADQGLHLDWRTYADTANGYI 256
Query: 127 QAGFIDKMEGLF----QLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCY 182
+AG +K + Q+++++ K S GA KK+ R +++E+ G Y
Sbjct: 257 KAGLTEKALEMLRKSEQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKEL--DGFY 314
Query: 183 PDGGTAKVLLAACSNEDQTEQVTTVIRTMD 212
G + +++A D E+V ++ +
Sbjct: 315 NTGYIS--VISALLKMDDIEEVEKIMEEWE 342
>AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926535-8927722 FORWARD
LENGTH=395
Length = 395
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 19/210 (9%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 72
Y L++ Y L+ AE VF++MK +G + V+L+ + +TG + E +L +M
Sbjct: 47 YGALLNCYASKKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREME 106
Query: 73 KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEA------DISTYNILINRYG 126
+K D F +N+ L+ Y + ME+ L CEA D TY N Y
Sbjct: 107 DETVKPDIFTVNTRLHAYSVVSDVEGMEKFLM-----RCEADQGLHLDWRTYADTANGYI 161
Query: 127 QAGFIDKMEGLF----QLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCY 182
+AG +K + Q+++++ K S GA KK+ R +++E+ G Y
Sbjct: 162 KAGLTEKALEMLRKSEQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKEL--DGFY 219
Query: 183 PDGGTAKVLLAACSNEDQTEQVTTVIRTMD 212
G + +++A D E+V ++ +
Sbjct: 220 NTGYIS--VISALLKMDDIEEVEKIMEEWE 247
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 93/210 (44%)
Query: 2 QHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNV 61
Q GC+ D +YN L+ + G A ++E M++ ++ +++ + +K+G +
Sbjct: 270 QESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRL 329
Query: 62 SKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNIL 121
+ QM + L+ V +S+++ G+ G+ +V M+ + + L
Sbjct: 330 DAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSL 389
Query: 122 INRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGC 181
I+ Y +AG +D L+ + G +P+ +T I +++K + +F++M +G
Sbjct: 390 IDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGF 449
Query: 182 YPDGGTAKVLLAACSNEDQTEQVTTVIRTM 211
P T LL + Q + + +M
Sbjct: 450 LPTPSTYSCLLEMHAGSGQVDSAMKIYNSM 479
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 95/195 (48%), Gaps = 6/195 (3%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ P + ++ LVD+ G+AG L+ + V+ +M+ G P+ + L+ +++K G
Sbjct: 339 MKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGK 398
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTV---MENGSCEADIST 117
+ + ++M KSG + F L +M + + GK+E +TV ME ST
Sbjct: 399 LDTALRLWDEMKKSGFR-PNFGLYTM--IIESHAKSGKLEVAMTVFKDMEKAGFLPTPST 455
Query: 118 YNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
Y+ L+ + +G +D ++ + + GL+P + ++ S + + K+L +I EM
Sbjct: 456 YSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMK 515
Query: 178 DSGCYPDGGTAKVLL 192
G D + VL+
Sbjct: 516 AMGYSVDVCASDVLM 530
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 86/202 (42%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM 71
+YN ++ +A L A F+ + G +++ L+ F G K +I M
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 72 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
K+ LD ++ + G+ ++ M+ S ++ L++ G+AG +
Sbjct: 305 EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 132 DKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVL 191
D ++ + G +P + S I +Y+K L +++EM SG P+ G ++
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 192 LAACSNEDQTEQVTTVIRTMDK 213
+ + + + E TV + M+K
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEK 446
>AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:13116547-13118059 FORWARD
LENGTH=452
Length = 452
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%)
Query: 6 CEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
C P +YNILV YGR + + EA FE++++V + P ++ L++ + N K E
Sbjct: 170 CAPTVVTYNILVSVYGRLLMVKNMEAAFEELQKVKLPPNSVTYNFLIAGYMTAWNWDKME 229
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMEN 108
+M + ++ DT ML Y G +MEE+ V+++
Sbjct: 230 ATFQEMKRGPVEPDTDTYQLMLRGYANSGNLNRMEEMYEVIKD 272
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 79/162 (48%), Gaps = 3/162 (1%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKR-VGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM 71
YN L+ Y G + +++F+D +R PT+ ++ +L+S + + V E ++
Sbjct: 141 YNSLMSVYMWNGLAEECQSLFKDFRRQTHCAPTVVTYNILVSVYGRLLMVKNMEAAFEEL 200
Query: 72 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
K L ++ N ++ Y + KME M+ G E D TY +++ Y +G +
Sbjct: 201 QKVKLPPNSVTYNFLIAGYMTAWNWDKMEATFQEMKRGPVEPDTDTYQLMLRGYANSGNL 260
Query: 132 DKMEGLFQLLHSK-GLKPDVVTWTSRIGAYSKKKLYVRCLEI 172
++ME +++++ + G+ + + I AY KK + R +I
Sbjct: 261 NRMEEMYEVIKDQVGVNSGPLV-RAMICAYCKKAVEDRVQKI 301
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 75/138 (54%), Gaps = 3/138 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
+Q + P+ +YN L+ Y A + EA F++MKR + P ++ ++L ++ +GN
Sbjct: 200 LQKVKLPPNSVTYNFLIAGYMTAWNWDKMEATFQEMKRGPVEPDTDTYQLMLRGYANSGN 259
Query: 61 VSKCEDILNQMCKSGLKLDT-FVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYN 119
+++ E++ ++ K + +++ ++ +M+ Y + +++++ ++ S E + N
Sbjct: 260 LNRMEEMY-EVIKDQVGVNSGPLVRAMICAYCKKAVEDRVQKIENLLSLLSGEEYLPWLN 318
Query: 120 ILINR-YGQAGFIDKMEG 136
+L+ R Y Q F++ ME
Sbjct: 319 VLLIRLYAQEDFVEAMES 336
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 8/199 (4%)
Query: 16 LVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSG 75
L+D YG G L AE +F+ M + S +++A+ + G ++ ++ S
Sbjct: 371 LIDMYGECGQLKSAEVIFDRMAEKNVI----SWNSIIAAYVQNGKNYSALELFQELWDSS 426
Query: 76 LKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKME 135
L D+ + S+L Y + E+ + ++ N L++ Y G ++
Sbjct: 427 LVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDAR 486
Query: 136 GLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAAC 195
F + L DVV+W S I AY+ + +F EMI S P+ T LLAAC
Sbjct: 487 KCFNHI----LLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAAC 542
Query: 196 SNEDQTEQVTTVIRTMDKD 214
S ++ +M ++
Sbjct: 543 SISGMVDEGWEYFESMKRE 561
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 72/181 (39%), Gaps = 50/181 (27%)
Query: 51 LLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQ-------FGKMEEVL 103
+L +SK G VS E I N M ++ + N M+ Y R G+ F KM E
Sbjct: 273 ILDMYSKYGEVSYAERIFNGM----IQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSE-- 326
Query: 104 TVMENGSCEADISTYNIL------------------------------INRYGQAGFIDK 133
+NG I++ N+L I+ YG+ G +
Sbjct: 327 ---QNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKS 383
Query: 134 MEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLA 193
E +F + K +V++W S I AY + LE+F+E+ DS PD T +L
Sbjct: 384 AEVIFDRMAEK----NVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILP 439
Query: 194 A 194
A
Sbjct: 440 A 440
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 13 YNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMC 72
+N+++ + G +A + M G+ ++ ++ + + ++ + + I +
Sbjct: 98 WNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVI 157
Query: 73 KSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA--GF 130
K G D +V NS+++LY +LG E+V M E DI ++N +I+ Y GF
Sbjct: 158 KLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP----ERDIVSWNSMISGYLALGDGF 213
Query: 131 IDKMEGLFQLLHSKGLKPDVVTWTSRIGAYS 161
M LF+ + G KPD + S +GA S
Sbjct: 214 SSLM--LFKEMLKCGFKPDRFSTMSALGACS 242
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 8 PDRA--SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCE 65
P+R+ SY L+ Y + ++A +F +M+ +GI + ++SA S G + C
Sbjct: 134 PERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCR 193
Query: 66 DILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRY 125
+ + K L+ FV ++L++Y ++ M E ++ T+N+++N Y
Sbjct: 194 MLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMP----ERNLVTWNVMLNGY 249
Query: 126 GQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYP 183
+AG I++ E LF + K D+V+W + I +K L + EM+ G P
Sbjct: 250 SKAGLIEQAEELFDQITEK----DIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKP 303
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 88/205 (42%), Gaps = 23/205 (11%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
E D S+ ++D R L++A + +M R G+ P+ + LLSA +++ SK
Sbjct: 267 EKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQ 326
Query: 67 ILNQMCKSGLKLDTFVLNSMLNLYG-------RLGQFGKMEEVLTVMENGSCEADISTYN 119
+ + K G F+ ++++ Y L QF S + I++ N
Sbjct: 327 LHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQF-----------EASVKDHIASRN 375
Query: 120 ILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDS 179
LI + + G +++ +F H K D+ +W + I Y++ L +F EMI S
Sbjct: 376 ALIAGFVKNGMVEQAREVFDQTHDK----DIFSWNAMISGYAQSLSPQLALHLFREMISS 431
Query: 180 G-CYPDGGTAKVLLAACSNEDQTEQ 203
PD T + +A S+ E+
Sbjct: 432 SQVKPDAITMVSVFSAISSLGSLEE 456
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 42 TPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEE 101
+ T ++ + L + + + +V+ I ++ KSGL + ++ NS+LN+Y + E
Sbjct: 38 SDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAES 97
Query: 102 VLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYS 161
V + D +++NI+++ Y ++ + LF ++ + V++T+ I Y+
Sbjct: 98 VF----RDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERS----CVSYTTLIKGYA 149
Query: 162 KKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSN 197
+ + +E+F EM + G + T +++ACS+
Sbjct: 150 QNNQWSEAMELFREMRNLGIMLNEVTLATVISACSH 185
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 93/211 (44%), Gaps = 2/211 (0%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ G +P YN ++DA + G+ + A AV+ED K G+ + M+L+ K G
Sbjct: 219 MKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGR 278
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
+ + +IL +M ++ K D F +M+ G V M + D+ Y
Sbjct: 279 IEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGT 338
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRI-GAYSKKKLYVRCLEIFEEMIDS 179
L+ + G +++ LF + K + D + I G + K+ C ++E+++DS
Sbjct: 339 LVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSAC-NLWEDLVDS 397
Query: 180 GCYPDGGTAKVLLAACSNEDQTEQVTTVIRT 210
G D G ++ + +Q ++ + +
Sbjct: 398 GYIADIGIYNAVIKGLCSVNQVDKAYKLFQV 428
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 81/202 (40%)
Query: 2 QHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNV 61
+ G + D A+YN R G A+ + E M G P+ K +L+ +
Sbjct: 150 KQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRG 209
Query: 62 SKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNIL 121
+ + +M K G K F+ N +++ + G F V + + +T+ IL
Sbjct: 210 LRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMIL 269
Query: 122 INRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGC 181
+ +AG I++M + Q + KPDV +T+ I + L +++EM
Sbjct: 270 VKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEI 329
Query: 182 YPDGGTAKVLLAACSNEDQTEQ 203
PD L+ + + E+
Sbjct: 330 KPDVMAYGTLVVGLCKDGRVER 351
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 72/160 (45%)
Query: 1 MQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGN 60
M+ C+PD +Y ++ G L+ + V+++M+R I P + ++ L+ K G
Sbjct: 289 MRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGR 348
Query: 61 VSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNI 120
V + ++ +M + +D + ++ + G+ + + + ADI YN
Sbjct: 349 VERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNA 408
Query: 121 LINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAY 160
+I +DK LFQ+ + L+PD T + + AY
Sbjct: 409 VIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAY 448
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 76/194 (39%), Gaps = 4/194 (2%)
Query: 1 MQHMGCEPDRASYNILVDAYG--RAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKT 58
M G P + IL+ + R G V+E MK+ G P + + ++ A K
Sbjct: 184 MDSQGRPPSEKQFEILIRMHADNRRGL--RVYYVYEKMKKFGFKPRVFLYNRIMDALVKN 241
Query: 59 GNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTY 118
G + + GL ++ ++ + G+ +M E+L M C+ D+ Y
Sbjct: 242 GYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAY 301
Query: 119 NILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMID 178
+I G +D ++ + +KPDV+ + + + K R E+F EM
Sbjct: 302 TAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKG 361
Query: 179 SGCYPDGGTAKVLL 192
D +VL+
Sbjct: 362 KQILIDREIYRVLI 375
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 86/182 (47%), Gaps = 8/182 (4%)
Query: 16 LVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSG 75
LV Y + G L+ AE +FE M+ + + L+ +TGN + + N+MC
Sbjct: 150 LVMMYMKFGELSSAEFLFESMQ----VKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADA 205
Query: 76 LKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKME 135
++ D+F + SML+ G+LG EE+ + +I N ++ + + G +
Sbjct: 206 VQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAAR 265
Query: 136 GLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAAC 195
LF+ + + +VV+W++ I Y+ L +F M + G P+ T +L+AC
Sbjct: 266 VLFEEMKQR----NVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSAC 321
Query: 196 SN 197
S+
Sbjct: 322 SH 323
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 88/181 (48%), Gaps = 16/181 (8%)
Query: 8 PDRASYNILVDAYGRAGFLNDAEAVFEDMKR---VGITPTMKSHMVLLSAFSKTGNVSKC 64
PD Y L+ Y + G + D + E M+R P ++ ++SAF G + +
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVM-ENGSCEADISTYNILIN 123
+L +M + G+ + N +L Y + Q + E++L M E+ E D+ +YNI+I+
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 124 RYGQAGFIDKMEG---LFQLLHSKGLKPDVVTWTSRIGAYS---KKKLYVRCLEIFEEMI 177
ID G F + ++G+ P +++T+ + A++ + KL R +F+EM+
Sbjct: 532 ---GCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANR---VFDEMM 585
Query: 178 D 178
+
Sbjct: 586 N 586
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 84/190 (44%), Gaps = 16/190 (8%)
Query: 7 EPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCED 66
PD +Y +V A+ AG ++ A V +M R+G+ ++ VLL + K + + ED
Sbjct: 449 HPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAED 508
Query: 67 ILNQMCK-SGLKLDTFVLNSML-------NLYGRLGQFGKMEEVLTVMENGSCEADISTY 118
+L +M + +G++ D N ++ + G L F +M G IS Y
Sbjct: 509 LLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMR------TRGIAPTKIS-Y 561
Query: 119 NILINRYGQAGFIDKMEGLF-QLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMI 177
L+ + +G +F ++++ +K D++ W + Y + L + M
Sbjct: 562 TTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMK 621
Query: 178 DSGCYPDGGT 187
++G YP+ T
Sbjct: 622 ENGFYPNVAT 631
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 13/165 (7%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D S +L A ++G A +V + M R G P +K+ +++ S +G+ E I
Sbjct: 152 DANSLGLLAMAAAKSGQTLYAVSVIKSMIRSGYLPHVKAWTAAVASLSASGDDGPEESIK 211
Query: 69 -------------NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADI 115
+Q + DT N++LN LG K ++ M CE D+
Sbjct: 212 LFIAITRRVKRFGDQSLVGQSRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDV 271
Query: 116 STYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAY 160
TYN++I + G + + + + + KG+K + T S + AY
Sbjct: 272 LTYNVMIKLCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAAY 316
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 88/190 (46%), Gaps = 12/190 (6%)
Query: 16 LVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSG 75
L+ Y + A+ VF+ MK + + + M++ S+ GN +M +
Sbjct: 443 LLSMYFKNREAESAQKVFDVMKERDVV--LWTEMIV--GHSRLGNSELAVQFFIEMYREK 498
Query: 76 LKLDTFVLNSMLNLYGRLGQF--GKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDK 133
+ D F L+S++ + G++ L + C +S L++ YG+ G +
Sbjct: 499 NRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCV--MSVCGALVDMYGKNGKYET 556
Query: 134 MEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLA 193
E +F L + PD+ W S +GAYS+ + + L FE+++++G PD T LLA
Sbjct: 557 AETIFSLASN----PDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLA 612
Query: 194 ACSNEDQTEQ 203
ACS+ T Q
Sbjct: 613 ACSHRGSTLQ 622
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Query: 54 AFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEA 113
A + G V C I ++G V +++++YG+ G++ E + ++ N
Sbjct: 517 AMLRQGEVFHCLAI-----RTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASN----P 567
Query: 114 DISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIF 173
D+ +N ++ Y Q G ++K F+ + G PD VT+ S + A S + ++ ++
Sbjct: 568 DLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLW 627
Query: 174 EEMIDSG 180
+M + G
Sbjct: 628 NQMKEQG 634
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 9/182 (4%)
Query: 16 LVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSG 75
L++ Y ++ L+DA FE M + + S ++ F++ G + + QM
Sbjct: 282 LLNMYAKSNHLSDARECFESM----VVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLEN 337
Query: 76 LKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKME 135
L+ D S+L+ + ++++V ++ +S N LI+ Y + G + +
Sbjct: 338 LQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEAL 397
Query: 136 GLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAAC 195
F + +PD+V+WTS IGA + L++FE M+ PD T +L+AC
Sbjct: 398 LCFHSIR----EPDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSAC 452
Query: 196 SN 197
S+
Sbjct: 453 SH 454
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 8/199 (4%)
Query: 14 NILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCK 73
N ++ +G G ++ A VF+ M+ T + ++ A+ + G + D+ QM K
Sbjct: 269 NAMIVGFGEVGEISKARRVFDLMEDRD-NATWRG---MIKAYERKGFELEALDLFAQMQK 324
Query: 74 SGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDK 133
G++ L S+L++ L +V + + D+ ++L+ Y + G + K
Sbjct: 325 QGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVK 384
Query: 134 MEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLA 193
+ +F SK D++ W S I Y+ L L+IF EM SG P+ T +L
Sbjct: 385 AKLVFDRFSSK----DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILT 440
Query: 194 ACSNEDQTEQVTTVIRTMD 212
ACS + E+ + +M+
Sbjct: 441 ACSYAGKLEEGLEIFESME 459
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 4/173 (2%)
Query: 9 DRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDIL 68
D A++ ++ AY R GF +A +F M++ G+ P+ S + +LS + ++ +
Sbjct: 295 DNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVH 354
Query: 69 NQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQA 128
+ + D +V + ++ +Y + G+ K + V + DI +N +I+ Y
Sbjct: 355 AHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSS----KDIIMWNSIISGYASH 410
Query: 129 GFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGC 181
G ++ +F + S G P+ VT + + A S LEIFE M C
Sbjct: 411 GLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFC 463
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 4/144 (2%)
Query: 12 SYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM 71
++N L+ Y G DA A++ M G+ P + +L A G+V E I +
Sbjct: 162 AWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDL 221
Query: 72 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 131
K G D +VLN+++ +Y + G K V ++ + D ++N ++ Y G +
Sbjct: 222 VKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPH----KDYVSWNSMLTGYLHHGLL 277
Query: 132 DKMEGLFQLLHSKGLKPDVVTWTS 155
+ +F+L+ G++PD V +S
Sbjct: 278 HEALDIFRLMVQNGIEPDKVAISS 301
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 99/241 (41%), Gaps = 41/241 (17%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
G +PDR ++ ++ A G G + EA+ D+ + G + L+ ++K G++ K
Sbjct: 190 GVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKA 249
Query: 65 E-------------------------------DILNQMCKSGLKLDTFVLNSMLNLYGRL 93
DI M ++G++ D ++S+L R+
Sbjct: 250 RNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARV 306
Query: 94 GQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLFQLLHSKGLKPDVVTW 153
F ++ + E ++S N LI Y + G + + +F + L+ D V+W
Sbjct: 307 LSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQM----LERDTVSW 362
Query: 154 TSRIGAYSKKKLYVRCLEIFEEMIDSGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
+ I A+SK L+ FE+M + PDG T +L+ C+N E + M K
Sbjct: 363 NAIISAHSKNS---NGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSK 419
Query: 214 D 214
+
Sbjct: 420 E 420
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 8/209 (3%)
Query: 5 GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKC 64
GC D + Y R G ++ + +FE K + M S M+ S +++TG+ S+
Sbjct: 282 GCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVV--MWSSMI--SGYAETGDCSEV 337
Query: 65 EDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINR 124
++LNQM K G++ ++ L ++++ V + + + I N LI+
Sbjct: 338 MNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDM 397
Query: 125 YGQAGFIDKMEGLFQLLHSKGLKPDVVTWTSRIGAYSKKKLYVRCLEIFEEMIDSGCYPD 184
Y + G + +F L K D+V+W+S I AY LEIF+ MI G D
Sbjct: 398 YAKCGSLSAAREVFYELTEK----DLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVD 453
Query: 185 GGTAKVLLAACSNEDQTEQVTTVIRTMDK 213
+L+AC++ E+ T+ K
Sbjct: 454 DMAFLAILSACNHAGLVEEAQTIFTQAGK 482