Miyakogusa Predicted Gene

Lj5g3v2240960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2240960.1 Non Chatacterized Hit- tr|I1NFB9|I1NFB9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55718 PE,92.38,0,no
description,Ribosomal protein S5 domain 2-type fold, subgroup; no
description,NULL; mevDPdecarb: ,CUFF.57017.1
         (420 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G54250.1 | Symbols:  | GHMP kinase family protein | chr3:2008...   652   0.0  
AT2G38700.1 | Symbols: MVD1, ATMVD1 | mevalonate diphosphate dec...   617   e-177

>AT3G54250.1 | Symbols:  | GHMP kinase family protein |
           chr3:20082468-20084688 REVERSE LENGTH=419
          Length = 419

 Score =  652 bits (1683), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/417 (74%), Positives = 349/417 (83%), Gaps = 1/417 (0%)

Query: 5   SQNWVLMVTAQTPTNIAVIKYWGKRDETLILPVNDSISVTLDPNHLCTTTTVAVSPTFHQ 64
           ++ WV MVTAQTPTNIAVIKYWGKRDE  ILPVNDSISVTLDP+HLCT TTVAVSP F +
Sbjct: 3   TEKWVFMVTAQTPTNIAVIKYWGKRDEVRILPVNDSISVTLDPDHLCTVTTVAVSPAFDR 62

Query: 65  DRMWLNGKEIALSGGRFQSCLREIRARACDVDDKKKGVKITKEDWGKLHVHIASFNNFPT 124
           DRMWLNGKEI+LSG R+Q+CLREIR RA DV+D +KG+KI K+DW KL++HIAS NNFPT
Sbjct: 63  DRMWLNGKEISLSGSRYQNCLREIRGRAGDVEDMEKGIKIRKKDWEKLNLHIASHNNFPT 122

Query: 125 XXXXXXXXXXXXCLVYALGKLMNVKEDESQLSAIARQGSGSACRSLYGGFVKWIMGKEEN 184
                       CLV++L KLMNV ED S LSAIARQGSGSACRSL+GGFVKW MG +E+
Sbjct: 123 AAGLASSAAGFACLVFSLAKLMNVDEDPSHLSAIARQGSGSACRSLFGGFVKWTMGSKED 182

Query: 185 GSDSLAVQLADEKHWDDLVIVIAVVSSRQKETSSTSGMRESVETSLLLQHRAKEVVPKRI 244
           GSDS+AVQLADEKHWDDLVI+IAVVSSRQKETSSTSGMRESVETSLLLQHRAKEVVPKRI
Sbjct: 183 GSDSVAVQLADEKHWDDLVIIIAVVSSRQKETSSTSGMRESVETSLLLQHRAKEVVPKRI 242

Query: 245 LQMEEAIRNRDFASFSKLTCTDSNQFHAVCLDTCPPIFYMNDTSHRIISIIEKWNRSEEA 304
           LQMEEAI+NRDFASF++LTCTDSNQFHAVCLDT PPIFYMNDTSHRIIS++EKWNRSE  
Sbjct: 243 LQMEEAIKNRDFASFTQLTCTDSNQFHAVCLDTSPPIFYMNDTSHRIISLVEKWNRSEGT 302

Query: 305 PQVAYTFDAGPNAVXXXXXXXXXXXXXXXXXYYFPPNSD-DLNSYIIGDKSIAKDAGING 363
           PQVAYTFDAGPNAV                 YYFPP SD D+ SY++GD SI K+AG++G
Sbjct: 303 PQVAYTFDAGPNAVLIARNRKVAVQLLQGLLYYFPPKSDTDMKSYVVGDNSILKEAGLDG 362

Query: 364 ISDVEALPPPPEIKDNIPSQKYKGDVNYFICTRPGRGPVLLSDENQALLNGENGLPK 420
            S VE L PPPEIKDNI SQ  KG+V+YFICTRPG+GP++L D+ QALL+ E GLPK
Sbjct: 363 ASGVENLQPPPEIKDNIGSQDQKGEVSYFICTRPGKGPIVLHDQTQALLDPETGLPK 419


>AT2G38700.1 | Symbols: MVD1, ATMVD1 | mevalonate diphosphate
           decarboxylase 1 | chr2:16180918-16183785 REVERSE
           LENGTH=412
          Length = 412

 Score =  617 bits (1590), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 296/416 (71%), Positives = 338/416 (81%), Gaps = 8/416 (1%)

Query: 6   QNWVLMVTAQTPTNIAVIKYWGKRDETLILPVNDSISVTLDPNHLCTTTTVAVSPTFHQD 65
           + WV+MVTAQTPTNIAVIKYWGKRDE  ILP+NDSISVTLDP+HLCT TTVAVSP+F +D
Sbjct: 4   EKWVVMVTAQTPTNIAVIKYWGKRDEVRILPINDSISVTLDPDHLCTLTTVAVSPSFDRD 63

Query: 66  RMWLNGKEIALSGGRFQSCLREIRARACDVDDKKKGVKITKEDWGKLHVHIASFNNFPTX 125
           RMWLNGKEI+LSG R+Q+CLREIR+RA DV+DK+KG+KI K+DW KLH+HIAS NNFPT 
Sbjct: 64  RMWLNGKEISLSGSRYQNCLREIRSRADDVEDKEKGIKIAKKDWEKLHLHIASHNNFPTA 123

Query: 126 XXXXXXXXXXXCLVYALGKLMNVKEDESQLSAIARQGSGSACRSLYGGFVKWIMGKEENG 185
                      CLV+AL KLMNV ED SQLSAIARQGSGSACRSL+GGFVKW MG +E+G
Sbjct: 124 AGLASSAAGFACLVFALAKLMNVNEDPSQLSAIARQGSGSACRSLFGGFVKWNMGNKEDG 183

Query: 186 SDSLAVQLADEKHWDDLVIVIAVVSSRQKETSSTSGMRESVETSLLLQHRAKEVVPKRIL 245
           SDS+AVQL D+KHWDDLVI+IAVVSSRQKETSSTSGMRESVETSLLLQHRAKEVVP RIL
Sbjct: 184 SDSVAVQLVDDKHWDDLVIIIAVVSSRQKETSSTSGMRESVETSLLLQHRAKEVVPVRIL 243

Query: 246 QMEEAIRNRDFASFSKLTCTDSNQFHAVCLDTCPPIFYMNDTSHRIISIIEKWNRSEEAP 305
           QMEEAI+NRDF SF+KLTC+DSNQFHAVC+DT PPIFYMNDTSHRIIS++EKWNRS   P
Sbjct: 244 QMEEAIKNRDFTSFTKLTCSDSNQFHAVCMDTSPPIFYMNDTSHRIISLVEKWNRSAGTP 303

Query: 306 QVAYTFDAGPNAVXXXXXXXXXXXXXXXXXYYFPPNSD-DLNSYIIGDKSIAKDAGINGI 364
           ++AYTFDAGPNAV                 Y FPP  D D+ SY++GD SI K+AG+ G 
Sbjct: 304 EIAYTFDAGPNAVMIARNRKVAVELLQGLLYCFPPKPDTDMKSYVLGDTSIVKEAGLEG- 362

Query: 365 SDVEALPPPPEIKDNIPSQKYKGDVNYFICTRPGRGPVLLSDENQALLNGENGLPK 420
                   P  IKD I SQ  KG+V+YFIC+RPGRGPV+L D+ QALL+ + GLPK
Sbjct: 363 ------ELPQGIKDKIGSQDQKGEVSYFICSRPGRGPVVLQDQTQALLHPQTGLPK 412