Miyakogusa Predicted Gene
- Lj5g3v2240900.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2240900.1 Non Chatacterized Hit- tr|I1LF21|I1LF21_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,64.4,0,seg,NULL;
FAMILY NOT NAMED,NULL,CUFF.57004.1
(1052 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G22450.1 | Symbols: | unknown protein; LOCATED IN: chloropla... 379 e-105
AT2G19390.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 182 8e-46
AT4G29790.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 175 2e-43
>AT5G22450.1 | Symbols: | unknown protein; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G19390.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink). | chr5:7437145-7442856 REVERSE LENGTH=1154
Length = 1154
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 340/1048 (32%), Positives = 530/1048 (50%), Gaps = 136/1048 (12%)
Query: 59 RGNSPSSGDSASEANSLVLDPITMGDQKYTGSGELRRVLRISFGNTLEDYAFGTANLKSP 118
RG S D+ + + L L+PI +G+Q YT SGELRRVL + + ED +FG ++ +
Sbjct: 10 RGTIGLSSDTPNLSQVLTLEPIRLGNQNYTRSGELRRVLGVPSRASSEDNSFGMSHPRPS 69
Query: 119 LPVAPEELKRFKASLQEAAARARCRSKRLDESLHKLNKCWETINSKKQLQNELLPNEKLG 178
PVA EELK FK S+ + + A K+L E++ KL+K ETINSKK+ +N++ P E++
Sbjct: 70 PPVATEELKHFKESVLDTSREAGDLVKKLSENIFKLDKYAETINSKKRRRNDIPPGERMD 129
Query: 179 GSHSTKLGSQTHWGPSELVNQRLEDRPKNVILNKCTQTSASELRNGGQSNRKDRDNINDS 238
+ K+ +Q +++ QR E+R K + LNK +T+ +++R + + R ++ +
Sbjct: 130 AATFDKVRNQVPR-TQDIMAQRSEERKKMLGLNKRARTTVADVRGDARISALARQHVIE- 187
Query: 239 GKGCDI----------VEEKVRRLPAGGETWDRKMKRKRSMGNVFARSIDAEGELKRVMR 288
KG D +EEK+RRLP GGE W+ +MKRKRS+ + R ++ E +RVM+
Sbjct: 188 -KGSDSPPSVSGESVRIEEKIRRLPVGGEGWETRMKRKRSVATLGNRIMNPE---QRVMQ 243
Query: 289 LKLANESVLHPSDAQGLRLNSCDNNHTGGIYTLTKNKPSRAPQTGHF---------IAGN 339
K +S L D+Q R S GI L + +P G IA +
Sbjct: 244 PKPTADSKLRSCDSQNFRSKSSPG--VSGINRLDTSFEPDSPCMGALSRNELETVSIARD 301
Query: 340 SSVSRSSETPEAWEQ-----PSSVNNTHAVRGTTNPKRP-----LPVESSL---SP---- 382
SV + + S N++ A+ + P + VESS SP
Sbjct: 302 RSVLAEQRLAKGNNKRNLLDDSPTNSSTAILKGKVSRAPRTAAIMGVESSAKVDSPSGVL 361
Query: 383 -------MAQWVGQRPNKISRTRRANVVSPALNCDEMHMSFESCPPSDVGTSMASNTTSG 435
MAQWVGQRP+K SRTRR NVVSP + E +S + SD + AS T+G
Sbjct: 362 QGSSAHAMAQWVGQRPHKNSRTRRTNVVSPVIKHSESKISGQGFATSDF-SPRASPGTTG 420
Query: 436 SLISKGAINNIQVGRVKHE--NVSPPSRLXXXXXXGAGQNGESTLKEKGLESSEVDAKAI 493
L ++ + ++K E N S P L GAG N +E+ S ++
Sbjct: 421 PL----SVVDSSPLKMKRELRNASSPYGLSESEDSGAGDN---KTRERAFASGDL----- 468
Query: 494 NYSHNISSSLLVMXXXXXPSNEEIGDGLRKHGRGRG-SSVLKAGISSLIEKLEISTLTKP 552
++ S SLL+ G G K G+ SS+ G ++ K E + KP
Sbjct: 469 -FTTPKSGSLLLPTRKNKIQTSHKGGGAWKQGKSESVSSLTTPGFHPIMVKSENLPVEKP 527
Query: 553 IRNMNPASEENXXXXX---XXXXXXXXXXXAIALTSRSP-DIAGESDNDREELLDAANFA 608
N+ AS++N +A + +P DI GESD+DRE++ AAN A
Sbjct: 528 FHNIKIASDKNRSKYGRPPAKKVKDRKPATRLASNANTPSDITGESDDDREDIFAAANSA 587
Query: 609 SNASYIGCSSSFWKKLEPNFAPVNLEDIDYLKQLVKKAEVDQRCLSQMLCLGRDAKDGVL 668
A+ + CS FWKK++ FA VN++D+ +K + A+ + LS D +L
Sbjct: 588 RKAANLACSGKFWKKMDHIFAAVNVDDMQNMKDQLNFAQELDKSLS----------DAIL 637
Query: 669 HTDNLLS-QSPLVIETGRSILNQTGSEGISSMVDMVDQHQDRRFLCRQMDLEGNKVAPLY 727
N+L + P + R + G +S V R R++ N+ PLY
Sbjct: 638 DGYNILGLKLPKAVH--RPGVGNVDYSGPTSSC--VSGLSFERLDMRKL----NESTPLY 689
Query: 728 QRVLTALIIDDQTDEETVGDG--NMSFMCERDDSPPVACFSQDVENQSGHRSEYAFNS-- 783
+RVL+ALI +D +E +G N+S DDS +C D E + R E+ S
Sbjct: 690 KRVLSALIEEDDGEEVVQFNGGKNLSLHYASDDSHCGSCTYIDTEFRERDRMEFEVESSG 749
Query: 784 ----------DKVSCSGNAT---FTSG---TNIHDQEL---DDFLQVDQGPLYPET--ER 822
D+ S + F +G ++H E DD L L ET
Sbjct: 750 DFQTPKSGLFDRFSSERSVVSNPFRNGGMSISVHSNEQWIGDDDLSHSDAALGNETYSNS 809
Query: 823 LAMLSANGSGGLMGMPKTLCSSSLNCHFEQMSMEDKLLLELQSVGIYPEPVPDLADGDCE 882
L L A + +P S + ++ MS++++LLLELQS+G++PE +PDLA+ E
Sbjct: 810 LGQLQARE----VNIPNFPVS---DTQYQLMSLDERLLLELQSIGVFPEAMPDLAE---E 859
Query: 883 SIDQDIIQLQKGLFQQVTKKREYLMKLIQAVEESREIEQRALEQVAMDKLVELAYKKKLA 942
++ D+++L++G++Q++ K++ L KLI +++ +++E+R +E +AMD+LVE A+KK++A
Sbjct: 860 TMSTDVMELKEGIYQEILNKKKKLEKLIITIQKGKDVEKRKIEHLAMDQLVETAHKKRMA 919
Query: 943 TRGSAAARFGLSKVSRPVALAFMKRTLARCRKFEETGKSCFLEPALKDVLFAAPARD--- 999
RGS AA+ ++KV+R VAL F++RT+ARCRKFEETG SCF +PAL+D+LF++P+ D
Sbjct: 920 CRGSKAAK--VNKVTRQVALGFIRRTVARCRKFEETGFSCFSDPALQDILFSSPSNDAKS 977
Query: 1000 --NGAGSVAA--VNSPLTQNSRQSAGSG 1023
NG A+ +N P + + ++ GSG
Sbjct: 978 SENGGSGTASNTLNEP-SNHQAEAKGSG 1004
>AT2G19390.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G29790.1); Has 203 Blast hits to 188 proteins
in 60 species: Archae - 0; Bacteria - 11; Metazoa - 24;
Fungi - 34; Plants - 93; Viruses - 0; Other Eukaryotes -
41 (source: NCBI BLink). | chr2:8390136-8396477 REVERSE
LENGTH=1211
Length = 1211
Score = 182 bits (463), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 184/661 (27%), Positives = 298/661 (45%), Gaps = 105/661 (15%)
Query: 348 TPEAWEQPSSVNNTHAVRGTTNPKRPLPVESSLSPMAQWVGQRPNKISR-TRRANVVSPA 406
+P W+ N + G T KR SS P+ QW QRP KISR RR N+V
Sbjct: 421 SPIEWDISGCTNKPPTLSGVTQRKRMTSNRSSSPPVTQWASQRPQKISRIARRTNLVPIV 480
Query: 407 LNCDEMHMSFESCPPSDVGTSMASNTTSGSLISKGAINNIQVGRVKHENVSPPSRLXXXX 466
+ DE+ P SD + + + T + + Q+ ++K E+ + L
Sbjct: 481 SSQDEV-------PYSDNISDVGCSETGFGFHKRSPAASPQL-KLKGESSFSTAALSESE 532
Query: 467 XXGAGQNGESTLKEKGLESSEVDAKAINYSHNISSSLLVMXXXXXPS-NEEIGDGLRKHG 525
G + E K+KG +S EVD KA +S L P+ EEIGDG+R+ G
Sbjct: 533 ESG---HPEIKSKDKGKQSDEVDGKAAQNIPRVSIPALQSRKSNKPAAGEEIGDGVRRQG 589
Query: 526 R-GRGSSVLKAGISSLIEKLEISTLTKPIRNMNPASEENXX------XXXXXXXXXXXXX 578
R GRG S ++ + + KL+ K +R+ P ++N
Sbjct: 590 RTGRGFSSTRSLNPNGVNKLKNVGTAKHLRSARPIFDKNESKVGRPPTRKLSDRKAYKRQ 649
Query: 579 XAIALTSRSPDIAGESDNDREELLDAANFASNASYIGCSSSFWKKLEPNFAPVNLEDIDY 638
A A + + D S++ REELL A N A N + +SFWK++E F ++ + I++
Sbjct: 650 RATATNAPTLDFHVGSNDGREELLAAVNSAINIAQ-NFPNSFWKQMERYFGYISDDHINF 708
Query: 639 LKQLVKKAEVDQRCLSQMLCLGRDAKDGVLHTDNLLSQSPLVIETGRSILNQTGSEGISS 698
LKQ Q LS M VL + SP+ E E +S
Sbjct: 709 LKQ--------QGELSSM------GPTPVLTSSEF--DSPVFPE-----------ELATS 741
Query: 699 MVDMVDQHQDRRFLCRQMDLEGNKVAPLYQRVLTALIIDDQTDEETVGDGNMSFMCERDD 758
D +K +PLYQR+L+ALI E+++G N + DD
Sbjct: 742 RAD-------------------SKASPLYQRLLSALI-----SEDSMG-VNEDLQVDLDD 776
Query: 759 SPPVACFSQDVENQSGHRSEYAFNSDKVSCSGNATFTSGTNIHDQELDDFLQVDQGPLYP 818
SE+ S N F N ELD+ L+
Sbjct: 777 D-----------------SEF-------SVLNNMEFNGFRNNERLELDESENDGSAILFK 812
Query: 819 ETERLAMLSANGSGGLMGMPKTLCSSSLNCHFEQMSMEDKLLLELQSVGIYPEPVPDLAD 878
++ A NG P ++ ++++ +++K+ LE QS+GI + +P +++
Sbjct: 813 GVDKSAH-HCNGK-----FPDNSPIDFVDIQYDKLGIDEKIYLEAQSLGISIDLMPSISN 866
Query: 879 GDCESIDQDIIQLQKGLFQQVTKKREYLMKLIQAVEESREIEQRALEQVAMDKLVELAYK 938
+ E I +I +L++ + + +KK+E + +L++ E +E++++ L+Q+ +KL+E+AY+
Sbjct: 867 VEDEGIADEIKKLEEAICNEGSKKKEIVDRLLKPAIEMKELQEKELDQLGYEKLIEMAYE 926
Query: 939 KKLATR--GSAAARFGLSKVSRPVALAFMKRTLARCRKFEETGKSCFLEPALKDVLFAAP 996
K A+R +A + +K+S+ ALAF++RTL RC +FE+TGKSCF EP +KD+ A
Sbjct: 927 KSKASRRHHNAGGKNSNNKISKQAALAFVRRTLERCHQFEKTGKSCFSEPEIKDMFIAGL 986
Query: 997 A 997
A
Sbjct: 987 A 987
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 140/288 (48%), Gaps = 30/288 (10%)
Query: 1 MAGNNRFDLSAARPEKLPFKGTFSNGQKRNLTNGALDRSASFREGNEGQTRVPG-AIPLR 59
M+ +FD S+ ++ ++ F+ ++RS+SFRE E VP I LR
Sbjct: 1 MSAPGKFDYSSGGLDRPLYRSNFA---------AQMERSSSFRESMEHP--VPSHPIMLR 49
Query: 60 GNSP-SSGDSASEANSLVLDP-ITMGDQKYTGSGELRRVLRISFGNTLEDYAFGTANLKS 117
SP + D + L DP + D K G+ +R + I+ G ++ G+ K
Sbjct: 50 TTSPIAQTDVTNFFQCLRFDPKVVAADHKSIRQGDFKRHVSIALGILGDESPSGSLKGKF 109
Query: 118 -PLPVAPEELKRFKASLQEAAARARCRSKRLDESLHKLNKCWETINSKKQLQNELLPNEK 176
P P+ PEE+KRFKA L+E +AR R K +E+ NK + ++ +KK+ + E ++
Sbjct: 110 IPSPI-PEEIKRFKAGLRENNVKARERVKIFNEASSVFNKFFPSVPTKKRSRPEGFSGDR 168
Query: 177 LG-----GSHSTKLG--SQTHWGPSELVNQRLEDRPKNVILNKCTQTSASELRNG---GQ 226
G G K+G QT G EL Q+L++RPK+ + NK T+TS ++RN Q
Sbjct: 169 SGDRLVSGPGLGKMGIQGQTLAGGFELDQQKLDERPKSGVPNKRTRTSMMDVRNNCIVRQ 228
Query: 227 SNRKDRDN-INDSGKGCDIVEEKVRRLPAGGETWD-RKMKRKRSMGNV 272
S D+D I G + E R G + W+ KMK+KRS N
Sbjct: 229 SAAVDKDKEIMRVGNHNAVQGED--RTSTGIDGWETSKMKKKRSSINA 274
>AT4G29790.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G19390.1); Has 538 Blast hits to 357 proteins
in 124 species: Archae - 0; Bacteria - 74; Metazoa -
109; Fungi - 58; Plants - 105; Viruses - 2; Other
Eukaryotes - 190 (source: NCBI BLink). |
chr4:14584228-14590123 FORWARD LENGTH=1211
Length = 1211
Score = 175 bits (444), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 192/734 (26%), Positives = 309/734 (42%), Gaps = 130/734 (17%)
Query: 279 AEGELKRVMRLKLANESVLHPSDAQGLRLNSCDNNHTGGIYTLTKNKPSRAPQTGHFIAG 338
A G K + L+ N+S +H ++N + L + R P++G +
Sbjct: 361 ATGSDKERVNLRAVNKSNIHD-----------ESNSSSPTSNLKISASVRGPRSGSGLPP 409
Query: 339 N-SSVSRSSETPEAWEQPSSVNNTHAVRGTTNPKRPLPVESSLSPMAQWVGQRPNKISRT 397
S V ++ +P W+ N + G N KR SS P+ QW QRP KISR
Sbjct: 410 KLSPVVHNTPSPSDWDIAGCTNKPPLLSGVPNRKRMTSNRSSSPPVTQWASQRPQKISRV 469
Query: 398 -RRANVVSPALNCDEM----HMSFESCPPSDVGTSMASNTTSGSLISKGAINNIQVGRVK 452
RR N+V + D++ +MS C + G S S + KG +
Sbjct: 470 ARRTNLVPIVSSNDDIPSSDNMSDVGCSETSFGFYRRSPAASPQMKMKGENSLSTTALSG 529
Query: 453 HENVSPPSRLXXXXXXGAGQNGESTLKEKGLESSEVDAKAINYSHNISSSLLVMXXXXXP 512
E SPP E K+KG +S EV+ K +S L
Sbjct: 530 SEEFSPP---------------EIKSKDKGKQSDEVNGKTSQNVPKVSIPGLQSRKNKLA 574
Query: 513 SNEEIGDGLRKHGR-GRGSSVLKAGISSLIEKLEISTLTKPIRNMNPASEENXXXXXXXX 571
S EE+GDG+R+ GR GRG + ++ + K + + RN + +E
Sbjct: 575 SGEELGDGVRRQGRTGRGFASTRSVNPMGVMKHGTAKQLRSARNGSDKNESRAGRPPTRK 634
Query: 572 XXXXXXXXAIALTSRSPDIAGESDNDREELLDAANFASNASYIGCSSSFWKKLEPNFAPV 631
T+ + D+ EELL A N A N + SSFWK++E F
Sbjct: 635 LSDRKAYKRQKNTATNATTLDFLDDGHEELLAAVNSAINFAQ-NFPSSFWKQMERYF--- 690
Query: 632 NLEDIDYLKQLVKKAEVDQRCLSQMLCLGRDAKDGVLHTDNLLSQSPLVIETGRSILNQT 691
C DA H + + Q L S + T
Sbjct: 691 --------------------------CFISDA-----HINFMKQQGEL------SFMGTT 713
Query: 692 GSEGISSMVDMVDQHQDRRFLCRQMDLEGNKVAPLYQRVLTALIIDDQ--TDEETVGDGN 749
G SS D + + ++D +K APLYQR+L+ALI +D +E+ DG
Sbjct: 714 PG-GTSSDFDSHEIFPEE-LASSKVD---SKAAPLYQRLLSALISEDSASVNEDLQFDG- 767
Query: 750 MSFMCERDDSPPVACFSQDVENQSG---HRSEY-AFNSDKVSCSGNATFTSGTNIHDQEL 805
F DVE++ H E+ + SD++ EL
Sbjct: 768 ---------------FGADVESEFSVLNHMMEFNGYRSDRLEF--------------DEL 798
Query: 806 DDFLQVDQGPLYPETERLAMLSANGSGGLMG--MPKTLCSSSLNCHFEQMSMEDKLLLEL 863
+D + V + + N S + + L + +E + +++K+ +E
Sbjct: 799 EDDVSV-----------IPLKGVNSSAHHVNGRLSDHLSIDFSDIQYETLGIDEKIYMEA 847
Query: 864 QSVGIYPEPVPDLADGDCESIDQDIIQLQKGLFQQVTKKREYLMKLIQAVEESREIEQRA 923
QS+GI +P+P +++ + E I DI L++ + + V+KK++ L +L++ E +E +++
Sbjct: 848 QSIGICLDPMPSISNVEDEGIVDDIKTLEEAICEVVSKKKDMLNRLLKPALEMKERQEKE 907
Query: 924 LEQVAMDKLVELAYKKKLATR--GSAAARFGLSKVSRPVALAFMKRTLARCRKFEETGKS 981
E++ +KL+E+AY+K A+R SA+ + +K+S+ A AF+KRTL RCR+FEETGKS
Sbjct: 908 FERLGYEKLIEMAYEKSKASRRHHSASGKSSATKISKQAAFAFVKRTLERCRQFEETGKS 967
Query: 982 CFLEPALKDVLFAA 995
CF E K+++ A
Sbjct: 968 CFSESTFKNIIIAG 981
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 137/284 (48%), Gaps = 29/284 (10%)
Query: 1 MAGNNRFDLSAARPEKLPFKGTFSNGQKRNLTNGALDRSASFREGNEGQTRVPGAIPLRG 60
M+ +FD S+ PE+ ++ + ++RS+SFRE E LR
Sbjct: 1 MSAPGKFDYSSGGPERPLYRSNLA---------AQMERSSSFRETMEHPVSSSHPSMLRS 51
Query: 61 NSP-SSGDSASEANSLVLDP-ITMGDQKYTGSGELRRVLRISFGNTLEDYAFGTANLKS- 117
SP + D + L DP + D K G+ +R + I+ G ++ + LK
Sbjct: 52 TSPIAQTDVTNFFQCLRFDPKVVAADHKSIRQGDFKRHVNIALG--IQGDESPSTPLKGK 109
Query: 118 --PLPVAPEELKRFKASLQEAAARARCRSKRLDESLHKLNKCWETINSKKQLQNELLPNE 175
P P+ PEE+KR KA L+E +AR R K +E+ NK + ++ +KK+ + E N+
Sbjct: 110 LIPSPI-PEEIKRLKAGLRENNVKARERLKIFNEASSVFNKFFPSVPTKKRSRPEGFSND 168
Query: 176 KLG-----GSHSTKLG--SQTHWGPSELVNQRLEDRPKNVILNKCTQTSASELRNGG--- 225
+ G G K+G QT G EL Q+L++RPK+ LNK T+TS ++R+
Sbjct: 169 RSGDRLALGPGMGKMGIQGQTLPGCFELDQQKLDERPKSGALNKRTRTSMMDVRSNAIVR 228
Query: 226 QSNRKDRDNINDSGKGCDIVEEKVRRLPAGGETWDR-KMKRKRS 268
QS DRD + V+ + R G + W++ KMK+KRS
Sbjct: 229 QSAGVDRDKDTMRLANHNAVQGEDRS-SIGIDGWEKSKMKKKRS 271