Miyakogusa Predicted Gene
- Lj5g3v2238650.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2238650.1 Non Chatacterized Hit- tr|I3SVP4|I3SVP4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,39.57,3e-19,A
Receptor for Ubiquitination Targets,F-box domain, cyclin-like;
FBOX,F-box domain, cyclin-like; F-b,CUFF.56979.1
(143 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G23880.1 | Symbols: | F-box and associated interaction domai... 72 1e-13
AT2G40910.2 | Symbols: | F-box and associated interaction domai... 60 4e-10
AT2G40910.1 | Symbols: | F-box and associated interaction domai... 60 5e-10
AT2G02030.1 | Symbols: | F-box family protein | chr2:482335-483... 58 2e-09
AT3G52320.1 | Symbols: | F-box and associated interaction domai... 55 1e-08
AT3G08750.1 | Symbols: | F-box and associated interaction domai... 55 2e-08
AT1G47790.1 | Symbols: | F-box and associated interaction domai... 54 4e-08
AT1G14315.2 | Symbols: | F-box and associated interaction domai... 52 1e-07
AT2G40925.1 | Symbols: | F-box and associated interaction domai... 52 2e-07
AT3G10240.1 | Symbols: | F-box and associated interaction domai... 51 3e-07
AT3G16580.1 | Symbols: | F-box and associated interaction domai... 51 3e-07
AT3G16210.1 | Symbols: | F-box family protein | chr3:5494533-54... 50 5e-07
AT3G61590.2 | Symbols: HWS | Galactose oxidase/kelch repeat supe... 50 5e-07
AT3G61590.1 | Symbols: HWS, HS | Galactose oxidase/kelch repeat ... 50 5e-07
AT1G51320.1 | Symbols: | F-box and associated interaction domai... 50 6e-07
AT2G41473.1 | Symbols: | F-box family protein | chr2:17294453-1... 50 7e-07
AT3G20690.1 | Symbols: | F-box and associated interaction domai... 49 8e-07
AT1G51290.1 | Symbols: | F-box and associated interaction domai... 49 1e-06
AT1G50870.1 | Symbols: | F-box and associated interaction domai... 49 1e-06
AT3G23950.1 | Symbols: | F-box family protein | chr3:8652908-86... 49 1e-06
AT2G14710.1 | Symbols: | F-box family protein | chr2:6298936-63... 49 1e-06
AT5G52610.1 | Symbols: | F-box and associated interaction domai... 49 2e-06
AT3G06240.1 | Symbols: | F-box family protein | chr3:1887336-18... 48 2e-06
AT4G04690.1 | Symbols: | F-box and associated interaction domai... 48 3e-06
AT1G12170.1 | Symbols: | F-box family protein | chr1:4128607-41... 48 3e-06
AT1G11620.1 | Symbols: | F-box and associated interaction domai... 48 3e-06
AT5G62660.1 | Symbols: | F-box and associated interaction domai... 47 3e-06
AT4G19940.1 | Symbols: | F-box and associated interaction domai... 47 3e-06
AT5G49610.1 | Symbols: | F-box family protein | chr5:20131448-2... 47 3e-06
AT4G19930.1 | Symbols: | F-box and associated interaction domai... 47 4e-06
AT1G12870.1 | Symbols: | F-box and associated interaction domai... 47 4e-06
AT3G21120.1 | Symbols: | F-box and associated interaction domai... 47 5e-06
AT2G40920.1 | Symbols: | F-box and associated interaction domai... 47 6e-06
AT3G26010.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 47 6e-06
AT1G47390.1 | Symbols: | F-box and associated interaction domai... 47 6e-06
AT1G71320.1 | Symbols: | F-box family protein | chr1:26882485-2... 46 8e-06
AT1G15015.1 | Symbols: | F-box family protein | chr1:5172340-51... 46 8e-06
AT2G40920.2 | Symbols: | F-box and associated interaction domai... 46 8e-06
AT5G62510.1 | Symbols: | F-box family protein | chr5:25095373-2... 46 8e-06
AT2G16810.1 | Symbols: | F-box and associated interaction domai... 46 9e-06
AT1G47730.1 | Symbols: | F-box and associated interaction domai... 46 9e-06
>AT3G23880.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:8622061-8623155
REVERSE LENGTH=364
Length = 364
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 69/131 (52%), Gaps = 3/131 (2%)
Query: 11 LPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTSTSGTIMSHQHLTLV 70
LP E++ EIL++LPVKSL RFKCVC SW+ LI + F H TS S + V
Sbjct: 14 LPLEMMEEILLRLPVKSLTRFKCVCSSWRSLISETLFALKHALILETSKATTSTKSPYGV 73
Query: 71 FDYSTKAV-TYSMHPLLENSPTLTKKLTFKMEGESNH-FIGSINGLVCFRDDQD-CIKLW 127
S + + +H L S + ++ G + +G+ +GLVCF D D + LW
Sbjct: 74 ITTSRYHLKSCCIHSLYNASTVYVSEHDGELLGRDYYQVVGTCHGLVCFHVDYDKSLYLW 133
Query: 128 NPSIRLTSRRS 138
NP+I+L R S
Sbjct: 134 NPTIKLQQRLS 144
>AT2G40910.2 | Symbols: | F-box and associated interaction
domains-containing protein | chr2:17069938-17071501
REVERSE LENGTH=442
Length = 442
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 8/141 (5%)
Query: 3 QRRPSLPILPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTSTSGTIM 62
+RR +P +L+ EI+++LP KS++RFKC+ K W LI F N TS +
Sbjct: 54 ERRKYTCEIPPDLLMEIVMRLPAKSMVRFKCISKQWSSLISCRYFCNSLF--TSVTRKKQ 111
Query: 63 SHQHLTLVFDYSTKAVTYSMHPLLENSPTLTKKLTFKMEGESNHFIGSINGLVCFR-DDQ 121
H H+ LV D+ + V S+ ++ + G F+ + GL+CF ++
Sbjct: 112 PHIHMCLV-DHGGQRVLLSLSSTSPDNTCYVVDQDLSLTGMGGFFLNLVRGLLCFSVREK 170
Query: 122 DCIKLWNPSIRLTSRRSPPAF 142
CI +NP+ R R + PA
Sbjct: 171 ACI--YNPTTR--QRLTLPAI 187
>AT2G40910.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr2:17069938-17071554
REVERSE LENGTH=449
Length = 449
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 8/141 (5%)
Query: 3 QRRPSLPILPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTSTSGTIM 62
+RR +P +L+ EI+++LP KS++RFKC+ K W LI F N TS +
Sbjct: 61 ERRKYTCEIPPDLLMEIVMRLPAKSMVRFKCISKQWSSLISCRYFCNSLF--TSVTRKKQ 118
Query: 63 SHQHLTLVFDYSTKAVTYSMHPLLENSPTLTKKLTFKMEGESNHFIGSINGLVCFR-DDQ 121
H H+ LV D+ + V S+ ++ + G F+ + GL+CF ++
Sbjct: 119 PHIHMCLV-DHGGQRVLLSLSSTSPDNTCYVVDQDLSLTGMGGFFLNLVRGLLCFSVREK 177
Query: 122 DCIKLWNPSIRLTSRRSPPAF 142
CI +NP+ R R + PA
Sbjct: 178 ACI--YNPTTR--QRLTLPAI 194
>AT2G02030.1 | Symbols: | F-box family protein | chr2:482335-483829
FORWARD LENGTH=334
Length = 334
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Query: 11 LPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTSTSGTIMSHQHLTLV 70
+P+E++ EILV+LPVKSL RF+ V K W+ LI F H+ + G + V
Sbjct: 39 IPNEIVEEILVRLPVKSLTRFQTVSKHWRTLITSKYFGKRHMALEKSKGCKLLFVCDDFV 98
Query: 71 FDYSTKAVTYSMHPLLENSPTLTKKLTFKMEGESN--HFIGSINGLVCFRDDQDCIKLWN 128
D + + L + S + + F+ EG S +GLVCF D +++ N
Sbjct: 99 -DRAEDTLFLKTVALEKTSVSEGDEQAFEFEGYKGFLDISESCDGLVCFYDTTRAVEVMN 157
Query: 129 PSIRL 133
P+ +
Sbjct: 158 PATTM 162
>AT3G52320.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:19403020-19404192
REVERSE LENGTH=390
Length = 390
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 25/137 (18%)
Query: 8 LPILPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTSTSGTIMSHQHL 67
LP +P+E++ +IL++LP KSLMRFKCV K W LI F N + +S S
Sbjct: 24 LPEIPEEMLIDILIRLPAKSLMRFKCVSKLWLSLITSRYFTNRFFKPSSPS--------- 74
Query: 68 TLVFDYSTKAVTYSMHPLLE------------NSPTLTKKLTFKMEGESNHFIGSINGLV 115
+F Y S + LL+ + + + T + G + + + GL+
Sbjct: 75 -CLFAYLVDRENQSKYLLLQSSSSSRHDHSDTSVSVIDQHSTIPIMG--GYLVNAARGLL 131
Query: 116 CFRDDQDCIKLWNPSIR 132
C+R + +K+ NPS R
Sbjct: 132 CYRTGRR-VKVCNPSTR 147
>AT3G08750.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:2656716-2657825
REVERSE LENGTH=369
Length = 369
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 36/59 (61%)
Query: 8 LPILPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTSTSGTIMSHQH 66
LP LP ELI EIL K+P +SL+RFK CK W LI +F+ +HL H S I ++
Sbjct: 9 LPSLPFELIEEILYKIPAESLIRFKSTCKKWYNLITEKRFMYNHLDHYSPERFIRTYDQ 67
>AT1G47790.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:17600004-17601173
REVERSE LENGTH=389
Length = 389
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 13/128 (10%)
Query: 11 LPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTSTSGTIMSHQHLTLV 70
P +L EIL++LPVKS++RF+CV K W +I F+ + +ST Q L
Sbjct: 25 FPLDLASEILLRLPVKSVVRFRCVSKLWSSIITDPYFIKTYETQSST------RQSLLFC 78
Query: 71 FDYSTKAVTYSM--HPLLENSPTLTK--KLTFKMEGESNH--FIGSINGLVCFRDDQDCI 124
F S K +S+ H NS + + K+ E ++ S++GL+CF I
Sbjct: 79 FKQSDKLFVFSIPKHHYDSNSSSQAAIDRFQVKLPQEFSYPSPTESVHGLICFHVLATVI 138
Query: 125 KLWNPSIR 132
+WNPS+R
Sbjct: 139 -VWNPSMR 145
>AT1G14315.2 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:4886861-4887933
REVERSE LENGTH=303
Length = 303
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 8 LPILPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTSTSGTIMSHQHL 67
+ +LP + + +IL ++PVKSL+RFK CK WK+ I SQ+ S G + L
Sbjct: 1 MQLLPHDTVEDILERVPVKSLLRFKSACKQWKLTI-ESQYFQAKQLICSAGG-----KDL 54
Query: 68 TLVFDYSTKAVTYSMHPLLENSPTLTKKLTFKMEGESNH----FIGSINGLVCFRDDQDC 123
LV + H + +SP L K + E H F S +GLVC D Q
Sbjct: 55 NLVLVSEVPSTLVLPHHVTADSPPL-KTNVLLISSERYHIYQLFHNSCDGLVCLFDYQTL 113
Query: 124 IKL-WNPSIRLTSR 136
+ +NP+ R R
Sbjct: 114 NNIVYNPATRWHRR 127
>AT2G40925.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr2:17074905-17076116
REVERSE LENGTH=403
Length = 403
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Query: 11 LPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTSTSGTIMSHQHLTLV 70
+P +L+ EIL++LP KS MRFKCV K W LI F N + ++ LV
Sbjct: 27 IPPDLMIEILIRLPTKSFMRFKCVSKQWSPLISGRYFCNRLFTCVTRQQQQQPRLYMCLV 86
Query: 71 FDYSTKAVTYSMHPLLENSPTLTKKLTFKMEGESNHFIGSINGLVCFR-DDQDCIKLWNP 129
+ S P +N+ + + G +F S+ GL+CF+ + CI +NP
Sbjct: 87 AKDKQCVLLSSTSP--DNTCFVLVDQDLSIPG---YFFASVPGLLCFQFGTKACI--YNP 139
Query: 130 SIR 132
S +
Sbjct: 140 STK 142
>AT3G10240.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:3166698-3167867
FORWARD LENGTH=389
Length = 389
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 21/133 (15%)
Query: 11 LPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTSTSGTIMSHQHLTLV 70
+P +L+ EIL++LP KS+ RF+CV K W + F+N L T + L L
Sbjct: 27 IPLDLVSEILLRLPEKSVARFRCVSKPWSSITTEPYFIN--LLTTRSP-------RLLLC 77
Query: 71 FDYSTKAVTYSMHPLLENSPTLTKKLTF---------KMEGESNHF--IGSINGLVCFRD 119
F + K S+ + T K ++ + E N+F S+NGL+CF++
Sbjct: 78 FKANEKFFVSSIPQHRQTFETWNKSHSYSQLIDRYHMEFSEEMNYFPPTESVNGLICFQE 137
Query: 120 DQDCIKLWNPSIR 132
I +WNPS R
Sbjct: 138 SARLI-VWNPSTR 149
>AT3G16580.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:5647577-5648725
REVERSE LENGTH=382
Length = 382
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 24/127 (18%)
Query: 11 LPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTSTSGTIMSHQHLTLV 70
LP ELI EIL ++P +SL+RFK V K W L F+N+H +T
Sbjct: 15 LPWELIEEILSRVPPESLLRFKTVSKQWNALFRDKTFINNH--------------KMTFR 60
Query: 71 FDYSTKAVTYSMHPLLENSPTLTKKLTFKMEGESNH-----FIGSINGLVCFRDDQDCIK 125
F +TK+ YS+ + + ++LT + G +H + L+C D + +
Sbjct: 61 FILATKSKIYSVSI---DPKIVVRELTLDIPGLESHEIPKKLVDCDKLLLC--DMEKGVV 115
Query: 126 LWNPSIR 132
LWNP +R
Sbjct: 116 LWNPWLR 122
>AT3G16210.1 | Symbols: | F-box family protein |
chr3:5494533-5495615 REVERSE LENGTH=360
Length = 360
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 16/123 (13%)
Query: 10 ILPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTSTSGTIMSHQHLTL 69
LP+EL EILV+L +K L RF+CVCK+W+ LI F + R S + + +
Sbjct: 4 FLPEELAIEILVRLSMKDLARFRCVCKTWRDLINDPGFTETY-RDMSPAKFVSFYDKNFY 62
Query: 70 VFDYSTKAVTYSMHPLLENSPTLTKKLTFKMEG---ESNHFIGSINGLVCFRDDQDCIKL 126
+ D K P +T KL F ++ + + + +G +C + +
Sbjct: 63 MLDVEGK------------HPVITNKLDFPLDQSMIDESTCVLHCDGTLCVTLKNHTLMV 110
Query: 127 WNP 129
WNP
Sbjct: 111 WNP 113
>AT3G61590.2 | Symbols: HWS | Galactose oxidase/kelch repeat
superfamily protein | chr3:22792914-22794149 FORWARD
LENGTH=411
Length = 411
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 15/116 (12%)
Query: 10 ILPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTSTSGTIMSHQHLTL 69
+LPD+L+ IL LP+ S+ R VCK W ++ +FL + S +S +
Sbjct: 42 LLPDDLLERILSFLPIASIFRAGTVCKRWNEIVSSRRFLCNF------SNNSVSQRPWYF 95
Query: 70 VFDYSTKAVTYSMHPLLENSPTLTKKLTFKME--GESNHFIGSINGLVCFRDDQDC 123
+F + Y+ P++ K +F + SN F+ S GLVCF D+ DC
Sbjct: 96 MFTTTDDPSGYAYDPIIR------KWYSFDLPCIETSNWFVASSCGLVCFMDN-DC 144
>AT3G61590.1 | Symbols: HWS, HS | Galactose oxidase/kelch repeat
superfamily protein | chr3:22792914-22794149 FORWARD
LENGTH=411
Length = 411
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 15/116 (12%)
Query: 10 ILPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTSTSGTIMSHQHLTL 69
+LPD+L+ IL LP+ S+ R VCK W ++ +FL + S +S +
Sbjct: 42 LLPDDLLERILSFLPIASIFRAGTVCKRWNEIVSSRRFLCNF------SNNSVSQRPWYF 95
Query: 70 VFDYSTKAVTYSMHPLLENSPTLTKKLTFKME--GESNHFIGSINGLVCFRDDQDC 123
+F + Y+ P++ K +F + SN F+ S GLVCF D+ DC
Sbjct: 96 MFTTTDDPSGYAYDPIIR------KWYSFDLPCIETSNWFVASSCGLVCFMDN-DC 144
>AT1G51320.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:19025642-19026769
FORWARD LENGTH=375
Length = 375
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Query: 11 LPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTSTSGTIMSHQHLTLV 70
LP EL+ EIL ++P +SL++F+ VCK W L ++F+NDH + + + V
Sbjct: 6 LPWELVEEILCRVPPQSLVKFRTVCKQWNSLFDDNKFVNDHFVQSQPQLIFRTESKIYSV 65
Query: 71 FDYSTKAVTYSMHPLLENSPTLTKKLTFKMEGESNHFIGSINGLVCFRDDQDCIKLWNPS 130
+ K +H L P L ++ ++ H +GL+ + + +WNP
Sbjct: 66 -AVNFKGPRIEVHELPLAIPGLKSEMPIRL-----HDYVDCDGLLFCTSYFNGVLIWNPW 119
Query: 131 IRLT 134
+R T
Sbjct: 120 LRQT 123
>AT2G41473.1 | Symbols: | F-box family protein |
chr2:17294453-17294728 REVERSE LENGTH=91
Length = 91
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 14 ELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTST 57
+L+ EIL K+PVK L+RF+CVCKSW+ L +F+ H H +
Sbjct: 7 DLVIEILAKVPVKYLLRFRCVCKSWRSLFQDERFIRMHTTHAPS 50
>AT3G20690.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:7231570-7232682
REVERSE LENGTH=370
Length = 370
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 11 LPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTSTSGTIMSHQHLTLV 70
LP +L+ EIL +LP+ SL + CK+W +L H F N H+ + + SG + L ++
Sbjct: 6 LPHDLVEEILSRLPLISLKAMRSTCKTWNVLSKHRSFANKHIGNVTASGK----RDLIMI 61
Query: 71 FDYSTKAVTYSMHPLLENSPTLTKKLTFKMEG 102
D ++ ++H + N+ + L+ K +G
Sbjct: 62 KDCKVYSIGVNLHGIQNNNNIID--LSIKNKG 91
>AT1G51290.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:19012173-19013306
FORWARD LENGTH=377
Length = 377
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 30/42 (71%)
Query: 11 LPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHL 52
LP EL+ EIL ++P +SL RF+ VCK W L ++F+NDHL
Sbjct: 6 LPWELVEEILYRVPPQSLARFRTVCKQWNSLFDDNKFVNDHL 47
>AT1G50870.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:18855147-18856337
FORWARD LENGTH=396
Length = 396
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 20/133 (15%)
Query: 10 ILPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTSTSGTIMSHQHLTL 69
+ P +LI EIL++LPVKS++RF+CV K W F N + +ST +++ +
Sbjct: 30 LCPLDLILEILLRLPVKSVLRFRCVSKLWLSTTTDPYFTNSYEARSSTRPSLL------M 83
Query: 70 VFDYSTKAVTYSMHPLLENSPTLTKKLTFKMEGESNH----------FIGSINGLVCFRD 119
F K ++ +NS + ++ +S H F S++GL+ FR
Sbjct: 84 FFKNKDKLFVFTFPHHNQNS---KETHSYSQHVDSYHIKYPKYCCFPFTESVHGLISFRI 140
Query: 120 DQDCIKLWNPSIR 132
I +WNP++R
Sbjct: 141 STKPI-IWNPTMR 152
>AT3G23950.1 | Symbols: | F-box family protein |
chr3:8652908-8654164 REVERSE LENGTH=418
Length = 418
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Query: 11 LPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLND 50
+P EL +E+LV+LP+KSL RF+ +CK WK++I S+F D
Sbjct: 3 IPPELTFEVLVRLPLKSLARFRSMCKEWKLVI-DSEFFRD 41
>AT2G14710.1 | Symbols: | F-box family protein |
chr2:6298936-6300024 FORWARD LENGTH=362
Length = 362
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 27/125 (21%)
Query: 11 LPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTSTSGTIMSHQHLTLV 70
LP ELI EIL ++P KSL+RF+ V K W L F+N+H +T
Sbjct: 7 LPWELIEEILSRVPPKSLVRFRTVSKQWNALFDDKTFINNH--------------KMTFR 52
Query: 71 FDYSTKAVTY--SMHPLLENSPTLTKKLTFKMEG----ESNHFIGSINGLVCFRDDQDCI 124
F +TK+ Y S+ P++ + ++L + G E N+ + LVC +++ +
Sbjct: 53 FILATKSKIYSVSIDPVI-----VVRELPLGIPGLESLELNNLVDCNELLVCVKNNGAVV 107
Query: 125 KLWNP 129
WNP
Sbjct: 108 --WNP 110
>AT5G52610.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr5:21346423-21347478
REVERSE LENGTH=351
Length = 351
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 13/125 (10%)
Query: 10 ILPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTSTSGTIMSHQHLTL 69
++ ++L+ EIL++LPVK L R CVCK W +I F+N + +ST + +
Sbjct: 1 MISEDLLVEILLRLPVKPLARCLCVCKLWATIIRSRYFINLYQSRSST-------RQPYV 53
Query: 70 VFDYSTKAVTYSMHPLLENSPTLTKKLTFKMEGESNHFIGSINGLVCFRDDQDCIKLW-- 127
+F + H + P+L K T S+H +NGL+C + +LW
Sbjct: 54 MFALRDIFTSCRWHFFSSSQPSLVTKATCS-ANNSSHTPDCVNGLICV---EYMSQLWIS 109
Query: 128 NPSIR 132
NP+ R
Sbjct: 110 NPATR 114
>AT3G06240.1 | Symbols: | F-box family protein |
chr3:1887336-1888619 FORWARD LENGTH=427
Length = 427
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 34/170 (20%)
Query: 6 PSLPILPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHL----RHTSTSG-- 59
P +LP E+I EIL++LP KS+ RF+CV K + L F HL R+ S
Sbjct: 31 PESLVLPPEIITEILLRLPAKSIGRFRCVSKLFCTLSSDPGFAKIHLDLILRNESVRSLH 90
Query: 60 ---TIMSHQHLTLVFDYSTK-----AVTYSMHPLLENSPTLT--------------KKLT 97
+ SH +L F+ A +PL ++ + +++
Sbjct: 91 RKLIVSSHNLYSLDFNSIGDGIRDLAAVEHNYPLKDDPSIFSEMIRNYVGDHLYDDRRVM 150
Query: 98 FKMEGESN-----HFIGSINGLVCFRDDQDCIKLWNPSIRLTSRRSPPAF 142
K+ +S +GS NGLVC + + L+NP+ S+R P F
Sbjct: 151 LKLNAKSYRRNWVEIVGSSNGLVCISPGEGAVFLYNPTTG-DSKRLPENF 199
>AT4G04690.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr4:2373999-2375135
REVERSE LENGTH=378
Length = 378
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 11 LPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTSTSGTIMSHQHLTLV 70
LP EL+ EIL K P +SL RFK CK W +I +F+ +HL H S + +
Sbjct: 11 LPFELVEEILKKTPAESLNRFKSTCKQWYGIITSKRFMYNHLDH--------SPERFIRI 62
Query: 71 FDYSTKAVTYSMHPLLENSP 90
D+ T + M + +SP
Sbjct: 63 DDHKTVQIMDPMTGIFSDSP 82
>AT1G12170.1 | Symbols: | F-box family protein |
chr1:4128607-4129701 REVERSE LENGTH=364
Length = 364
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 28/43 (65%)
Query: 10 ILPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHL 52
ILP EL+ EIL ++P SL RFK VCK W L F+N+HL
Sbjct: 5 ILPWELVEEILYRVPPLSLTRFKIVCKQWNTLFKSKSFVNNHL 47
>AT1G11620.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:3910833-3911924
FORWARD LENGTH=363
Length = 363
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 11 LPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHL---RHTSTSGTIMSHQHL 67
L +L+ EIL ++P +SL+R + CK W+ LI +F+N HL R+ T+ +++H+
Sbjct: 6 LSSDLVEEILSRVPARSLVRLRSTCKQWEALIAEPRFVNKHLSHMRYREQQFTVFNNEHI 65
Query: 68 T 68
Sbjct: 66 V 66
>AT5G62660.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr5:25156326-25157465
REVERSE LENGTH=379
Length = 379
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 29/44 (65%)
Query: 9 PILPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHL 52
P +P +L+ EIL KLP KSLMRFKCV K W LI F N +L
Sbjct: 39 PEIPLDLLIEILTKLPAKSLMRFKCVSKLWSSLIRSRFFSNCYL 82
>AT4G19940.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr4:10806195-10807430
FORWARD LENGTH=411
Length = 411
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 1 MSQRRPSLPILPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTS 56
+ + R +P +P +L+ EIL +LP KSLMRFK V K W LI F N L+ +S
Sbjct: 25 LCKSRQPIPEIPFDLVIEILTRLPAKSLMRFKSVSKLWSSLICSRNFTNRLLKLSS 80
>AT5G49610.1 | Symbols: | F-box family protein |
chr5:20131448-20132527 REVERSE LENGTH=359
Length = 359
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 9 PILPDELIYEILVKLPVKSLMRFKCVCKSW 38
+ PDE+I +IL +LPVKSL RFK VCKSW
Sbjct: 7 ALFPDEVILQILARLPVKSLFRFKSVCKSW 36
>AT4G19930.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr4:10803558-10804853
FORWARD LENGTH=431
Length = 431
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 1 MSQRRPSLPILPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTSTSGT 60
M + +P +P +L+ EIL +LP KSLMRFK V K W LI F N LR S
Sbjct: 33 MCKSHEPMPYIPFDLVIEILTRLPAKSLMRFKSVSKLWSSLICSRTFTNRLLRVPS---- 88
Query: 61 IMSHQHLTLVF 71
+ ++TL F
Sbjct: 89 FIQRLYVTLTF 99
>AT1G12870.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:4387129-4389110
REVERSE LENGTH=416
Length = 416
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 9/136 (6%)
Query: 11 LPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTSTSGTIMSHQHLTLV 70
LPD+++ EI +KLPVK+LMRFK + K W+ + F HL+ S + H + ++
Sbjct: 33 LPDDVVEEIFLKLPVKALMRFKSLSKQWRSTLESCYFSQRHLKIAERSH--VDHPKVMII 90
Query: 71 FDYSTKAVTYSMHPLLENSPTLTKKLTFKMEGESNHFI---GSINGLVCFRD--DQDCIK 125
+ + S + S + F +H I S +G+ C QD I
Sbjct: 91 TEKWNPDIEISFRTISLESVSFLSSALFNFPRGFHHPIYASESCDGIFCIHSPKTQD-IY 149
Query: 126 LWNPSIRLTSRRSPPA 141
+ NP+ R R+ PPA
Sbjct: 150 VVNPATRWF-RQLPPA 164
>AT3G21120.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:7406326-7407429
FORWARD LENGTH=367
Length = 367
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 11 LPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTSTSGTIMSHQHLTLV 70
LP++L+ EIL K+P SL RF+ C+ W L+ F H + I+ ++
Sbjct: 3 LPEDLVLEILSKVPAVSLARFRSTCRRWNALVVDGSFAKKHYAYGPRQYPIV-----IML 57
Query: 71 FDYSTKAVTYSMHPLLENSPTLTKKLT 97
++ V+ +H + N+ + KLT
Sbjct: 58 IEFRVYLVSIDLHGINNNNGAPSAKLT 84
>AT2G40920.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr2:17072586-17074012
REVERSE LENGTH=436
Length = 436
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 16 IYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTSTSGTIMSHQ---HLTLVFD 72
+ EIL++ P+ SL RFKCV K W LI F N L +T T+ Q ++ L D
Sbjct: 59 VMEILMRFPLTSLTRFKCVSKQWSSLISSRYFCN--LLYT----TVTRQQPRLYMCLKDD 112
Query: 73 YSTKAVTYSMHPLLENSPTLTKKLTFKMEGESNHFIGSINGLVCFRDDQDCIKLWNPSIR 132
+ + P N+ + + + G F+ + GL+CF + +++NPS +
Sbjct: 113 GGHRVLLSISSPSRGNTSFVVVEQDLSIPGMGGFFLNVVRGLMCFSRRKKA-RIYNPSTK 171
>AT3G26010.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr3:9511901-9513145 FORWARD
LENGTH=414
Length = 414
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 18/135 (13%)
Query: 11 LPDELIYEILVKLPVKSLMRFKCVCKSWKILI----FHSQFLNDHLRHTSTSGTIMSHQH 66
L D + EIL +LP++ + RFK V K+WK I F F++ H R +STS ++M +
Sbjct: 10 LTDAIWTEILARLPLRIIARFKSVSKTWKSTIESVYFRRLFVSVH-RKSSTSWSLMWYGQ 68
Query: 67 LTLVFDYSTKAVTYSMHPLLENSPTLTKKLTFKMEGESNHFIGSINGLVCF-RDDQDCIK 125
LV + + + L K L+F + GS +GLV +D DC
Sbjct: 69 KDLVGFHGCE------------TWGLPKSLSFYIPSSLCIIEGSSHGLVLISENDDDCCF 116
Query: 126 LWNPSIRLTSRRSPP 140
+ NP ++ + PP
Sbjct: 117 VGNPVLQQWIKIPPP 131
>AT1G47390.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:17379544-17380656
FORWARD LENGTH=370
Length = 370
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 23/133 (17%)
Query: 11 LPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTSTSGTIMSHQHLTLV 70
LP ELI EIL ++P +SL+RF+ V K W L F+N+H +T
Sbjct: 7 LPCELIEEILSRVPPESLVRFRTVSKKWNALFDDKMFINNH--------------KMTFR 52
Query: 71 FDYSTKAVTY--SMHPLLENSPTLTKKLTFKMEGES--NHFIGSINGLVCFRDDQDCIKL 126
F +T++ Y SM P +E ++L+ + G + NG + +++ I +
Sbjct: 53 FILATESKFYSVSMTPKIE-----VRELSLDIPGLELKPKILIDCNGFLLCGMEKEGIVV 107
Query: 127 WNPSIRLTSRRSP 139
WNP +R P
Sbjct: 108 WNPWLRQAKWIKP 120
>AT1G71320.1 | Symbols: | F-box family protein |
chr1:26882485-26883818 FORWARD LENGTH=392
Length = 392
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 10/142 (7%)
Query: 6 PSLPILPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTSTSGTIMS-- 63
P +PD++ I LP+KSL RFK + K W +I + F + L T M
Sbjct: 9 PKTIFIPDDIAEGIFHHLPIKSLARFKVLSKKWTSMIESTYFSHKRLIRTGLPTPNMKFL 68
Query: 64 --HQHLTLVF--DYSTKAVTYSMHPLLENSPTLTKKLTFKMEGESNHFIGSINGLVCFR- 118
QH T F +YS ++T+ + + +K + + ++ +GS +GLV R
Sbjct: 69 HISQHFTANFVEEYSN-SITFLLETFSRDDQN-NRKTFDESQNKTIQVLGSCDGLVLLRI 126
Query: 119 -DDQDCIKLWNPSIRLTSRRSP 139
DD I L NP+ + + SP
Sbjct: 127 HDDFRSIYLINPTTKEHMKLSP 148
>AT1G15015.1 | Symbols: | F-box family protein |
chr1:5172340-5172822 FORWARD LENGTH=160
Length = 160
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 11 LPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRH 54
LP ++ +IL +LPVK+L +FKCVC +W+ I +F + H+ H
Sbjct: 5 LPHHVVEDILERLPVKTLRKFKCVCSTWRSTIDSQRFKDRHMIH 48
>AT2G40920.2 | Symbols: | F-box and associated interaction
domains-containing protein | chr2:17072586-17073719
REVERSE LENGTH=377
Length = 377
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Query: 18 EILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTSTSGTIMSHQ---HLTLVFDYS 74
EIL++ P+ SL RFKCV K W LI F N L +T T+ Q ++ L D
Sbjct: 2 EILMRFPLTSLTRFKCVSKQWSSLISSRYFCN--LLYT----TVTRQQPRLYMCLKDDGG 55
Query: 75 TKAVTYSMHPLLENSPTLTKKLTFKMEGESNHFIGSINGLVCFRDDQDCIKLWNPSIR 132
+ + P N+ + + + G F+ + GL+CF + +++NPS +
Sbjct: 56 HRVLLSISSPSRGNTSFVVVEQDLSIPGMGGFFLNVVRGLMCFSRRKKA-RIYNPSTK 112
>AT5G62510.1 | Symbols: | F-box family protein |
chr5:25095373-25096635 REVERSE LENGTH=420
Length = 420
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 29/44 (65%)
Query: 9 PILPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHL 52
P +P +L+ EIL +LP KSLMRFKCV K W LI F N +L
Sbjct: 42 PEIPLDLLIEILTRLPHKSLMRFKCVSKQWSSLIRSRFFSNRYL 85
>AT2G16810.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr2:7287944-7288831
REVERSE LENGTH=295
Length = 295
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 11 LPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTSTSGTIMSHQHLTLV 70
+P +L+ EIL +LP KS+MRFKCV K W L+ F N L S + + L
Sbjct: 41 IPQDLLIEILTRLPPKSVMRFKCVSKFWSSLLSSRYFCNRFLIVPSQPQPSL-YMCLLDR 99
Query: 71 FDYSTKAVTYSMHPLLENSPTLTKKLTFKMEGESNHFIGSINGLVCFRDDQDCIKLWNPS 130
++YS + S S + LT + G F+ + G + F + +++NP+
Sbjct: 100 YNYSKSLILSSAPSTSPYSFVFDQDLTIRKMG--GFFLRILRGFIFFTRNLKA-RIYNPT 156
Query: 131 IR 132
R
Sbjct: 157 TR 158
>AT1G47730.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:17563931-17565106
REVERSE LENGTH=391
Length = 391
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 23/133 (17%)
Query: 11 LPDELIYEILVKLPVKSLMRFKCVCKSWKILIFHSQFLNDHLRHTSTSGTIMSHQHLTLV 70
LP +L EI +LP KS++RF+CV K W + F N + + +L
Sbjct: 25 LPLDLTSEIFSRLPAKSVVRFRCVSKLWSSITTAPYFTN----------SFETRPNLMFF 74
Query: 71 FDYSTKAVTYSMHPLLENSPTLTKKLTFKMEGESNH-----------FIGSINGLVCFRD 119
F K +++ P +P + + +S H S++GL+CFR
Sbjct: 75 FKEGDKFFVFTI-PQHNQNPNESYSYSSSEIIDSYHTTYPKRCCVTTLTESVHGLICFRK 133
Query: 120 DQDCIKLWNPSIR 132
I +WNP++R
Sbjct: 134 AATPI-IWNPTMR 145