Miyakogusa Predicted Gene

Lj5g3v2237600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2237600.1 Non Chatacterized Hit- tr|G7ZYS7|G7ZYS7_MEDTR
Uncharacterized protein OS=Medicago truncatula GN=MTR_,88.62,0,no
description,NULL; SUBFAMILY NOT NAMED,NULL; AMMECR1 HOMOLOG,AMMECR1;
AMMECR1-like,NULL; AMMECR1,A,CUFF.56976.1
         (168 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G38710.2 | Symbols:  | AMMECR1 family | chr2:16184517-1618676...   300   4e-82
AT2G38710.1 | Symbols:  | AMMECR1 family | chr2:16184517-1618676...   300   4e-82

>AT2G38710.2 | Symbols:  | AMMECR1 family | chr2:16184517-16186764
           REVERSE LENGTH=214
          Length = 214

 Score =  300 bits (767), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 136/168 (80%), Positives = 154/168 (91%)

Query: 1   MVTANKEMVVYCFDTLVAHYNKEEAPPPAFDEGRHPLFVTWKKVVNGGEPRLRGCIGSLE 60
           MV+AN+EM VYCFDTLV+HYN EE PPPAF+E  HPLFVTWKK+VNGGEPRLRGCIG+LE
Sbjct: 1   MVSANREMAVYCFDTLVSHYNNEETPPPAFEEANHPLFVTWKKIVNGGEPRLRGCIGTLE 60

Query: 61  ARDLINGFKDYALISALRDRRFPPIEAKELPLLECTVSILTDYETANDYLDWEVGKHGII 120
           AR LI+GFKDYAL SALRDRRFPPI+AKELP L+CTVS+LTDYE A DYLDWEVGKHGII
Sbjct: 61  ARRLISGFKDYALTSALRDRRFPPIQAKELPSLQCTVSVLTDYEDAEDYLDWEVGKHGII 120

Query: 121 LEFSDPDYNTRRSATYLPGVAAHEGWTKLEAIDSLIRKAGYNGPITDA 168
           +EF++P+ NT+RSATYLP V AHEGWTK+EAIDSL+RKAGYNG IT+A
Sbjct: 121 IEFTEPETNTKRSATYLPEVPAHEGWTKIEAIDSLVRKAGYNGVITEA 168


>AT2G38710.1 | Symbols:  | AMMECR1 family | chr2:16184517-16186764
           REVERSE LENGTH=214
          Length = 214

 Score =  300 bits (767), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 136/168 (80%), Positives = 154/168 (91%)

Query: 1   MVTANKEMVVYCFDTLVAHYNKEEAPPPAFDEGRHPLFVTWKKVVNGGEPRLRGCIGSLE 60
           MV+AN+EM VYCFDTLV+HYN EE PPPAF+E  HPLFVTWKK+VNGGEPRLRGCIG+LE
Sbjct: 1   MVSANREMAVYCFDTLVSHYNNEETPPPAFEEANHPLFVTWKKIVNGGEPRLRGCIGTLE 60

Query: 61  ARDLINGFKDYALISALRDRRFPPIEAKELPLLECTVSILTDYETANDYLDWEVGKHGII 120
           AR LI+GFKDYAL SALRDRRFPPI+AKELP L+CTVS+LTDYE A DYLDWEVGKHGII
Sbjct: 61  ARRLISGFKDYALTSALRDRRFPPIQAKELPSLQCTVSVLTDYEDAEDYLDWEVGKHGII 120

Query: 121 LEFSDPDYNTRRSATYLPGVAAHEGWTKLEAIDSLIRKAGYNGPITDA 168
           +EF++P+ NT+RSATYLP V AHEGWTK+EAIDSL+RKAGYNG IT+A
Sbjct: 121 IEFTEPETNTKRSATYLPEVPAHEGWTKIEAIDSLVRKAGYNGVITEA 168