Miyakogusa Predicted Gene
- Lj5g3v2217220.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2217220.2 Non Chatacterized Hit- tr|I3S0W8|I3S0W8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.69,0,seg,NULL;
TRANSMEMBRANE PROTEIN HTP-1 RELATED,Uncharacterised protein family
UPF0016; UPF0016,Unchar,CUFF.57090.2
(229 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G68650.1 | Symbols: | Uncharacterized protein family (UPF001... 314 2e-86
AT1G25520.1 | Symbols: | Uncharacterized protein family (UPF001... 312 1e-85
AT5G36290.2 | Symbols: | Uncharacterized protein family (UPF001... 160 9e-40
AT5G36290.1 | Symbols: | Uncharacterized protein family (UPF001... 160 9e-40
AT4G13590.2 | Symbols: | Uncharacterized protein family (UPF001... 116 1e-26
AT4G13590.1 | Symbols: | Uncharacterized protein family (UPF001... 116 1e-26
AT1G64150.1 | Symbols: | Uncharacterized protein family (UPF001... 87 7e-18
>AT1G68650.1 | Symbols: | Uncharacterized protein family (UPF0016)
| chr1:25775825-25777683 FORWARD LENGTH=228
Length = 228
Score = 314 bits (805), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/229 (70%), Positives = 181/229 (79%), Gaps = 1/229 (0%)
Query: 1 MTSIVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLSALIVMTILSALVGW 60
M S++QGFTKSLAMT LSEIGDKTFFAAAILAMR+PRRLVL+GCLSALIVMTILSA +GW
Sbjct: 1 MGSLLQGFTKSLAMTFLSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGW 60
Query: 61 AAPNLVSRTWTHHITTFLFLGFGLWSLKEAIFEQGXXXXXXXXXXXXXKNWKAKNGASXX 120
AAPNL+SR WTHHITTFLF GFGLWSL + E G + K N S
Sbjct: 61 AAPNLISRKWTHHITTFLFFGFGLWSLWDGFKEGGGSEELAEVEAELDSDLKKTNDQSKN 120
Query: 121 XXXXXXXXXXXXRSFLSQFFSPIFLQAFSITFFGEWGDKSQLATIGLAADENPFGVVLGG 180
R FL+ FFSPIFL+AFSI FFGEWGDKSQLATIGLAADENP GVVLGG
Sbjct: 121 SKIEDEQKKQK-RPFLTAFFSPIFLKAFSINFFGEWGDKSQLATIGLAADENPLGVVLGG 179
Query: 181 ILAQTLCTTAAVMGGKSLASQISEKVVALSGGVLFIVFGIQSFLSPVES 229
I+AQTLCTTAAV+GGKSLASQISE++VALSGG+LFI+FGIQS L+PV++
Sbjct: 180 IVAQTLCTTAAVLGGKSLASQISERIVALSGGMLFIIFGIQSLLTPVDA 228
>AT1G25520.1 | Symbols: | Uncharacterized protein family (UPF0016)
| chr1:8962324-8964173 FORWARD LENGTH=230
Length = 230
Score = 312 bits (799), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 159/230 (69%), Positives = 183/230 (79%), Gaps = 1/230 (0%)
Query: 1 MTSIVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLSALIVMTILSALVGW 60
M+S++QGFTKSLAMT +SEIGDKTFFAAAILAMR+PRRLVL+GCLSALIVMTILSA +GW
Sbjct: 1 MSSVLQGFTKSLAMTFVSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGW 60
Query: 61 AAPNLVSRTWTHHITTFLFLGFGLWSLKEAIFEQGXXXXXXXXXXXXXK-NWKAKNGASX 119
AAPNL+SR WTHHITT LF GFGLWSL + E G + KA +
Sbjct: 61 AAPNLISRKWTHHITTLLFFGFGLWSLWDGFKEGGGGSEELAEVEAELDADLKANGKSPK 120
Query: 120 XXXXXXXXXXXXXRSFLSQFFSPIFLQAFSITFFGEWGDKSQLATIGLAADENPFGVVLG 179
R+FL+QFFSPIFL+AFSI FFGEWGDKSQLATIGLAADENPFGVVLG
Sbjct: 121 DSSKREDENKKQNRAFLTQFFSPIFLKAFSINFFGEWGDKSQLATIGLAADENPFGVVLG 180
Query: 180 GILAQTLCTTAAVMGGKSLASQISEKVVALSGGVLFIVFGIQSFLSPVES 229
G++AQ LCTTAAV+GGKSLASQISE++VALSGG+LFI+FGIQS+L+ VE+
Sbjct: 181 GVVAQFLCTTAAVIGGKSLASQISERIVALSGGMLFIIFGIQSYLTSVEA 230
>AT5G36290.2 | Symbols: | Uncharacterized protein family (UPF0016)
| chr5:14302977-14304972 FORWARD LENGTH=293
Length = 293
Score = 160 bits (404), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 128/232 (55%), Gaps = 28/232 (12%)
Query: 3 SIVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLSALIVMTILSALVGWAA 62
S+ S +M +++EIGD+TF AA++AMRHP+ VLSG LSAL VMTILS +G
Sbjct: 80 SVFDALFSSFSMILVTEIGDETFIIAALMAMRHPKATVLSGALSALFVMTILSTGLGRIV 139
Query: 63 PNLVSRTWTHHITTFLFLGFGLWSLKEAIFEQGXXXXXXXXXXXXXKNWKAKNGASXXXX 122
PNL+SR T+ T L+ FGL L A W++ + S
Sbjct: 140 PNLISRKHTNSAATVLYAFFGLRLLYIA--------------------WRSTDSKSNQKK 179
Query: 123 XXXXXXXXXX--------RSFLSQFFSPIFLQAFSITFFGEWGDKSQLATIGLAADENPF 174
R S+F +PIFL++F +TF EWGD+SQ+ATI LA +N
Sbjct: 180 EMEEVEEKLESGQGKTPFRRLFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAI 239
Query: 175 GVVLGGILAQTLCTTAAVMGGKSLASQISEKVVALSGGVLFIVFGIQSFLSP 226
GV +G + T+CT+ AV+GG LAS+IS++ VA GG+LF+ F + S+ P
Sbjct: 240 GVAIGASIGHTVCTSLAVVGGSMLASRISQRTVATVGGLLFLGFSVSSYFYP 291
>AT5G36290.1 | Symbols: | Uncharacterized protein family (UPF0016)
| chr5:14302977-14304972 FORWARD LENGTH=293
Length = 293
Score = 160 bits (404), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 128/232 (55%), Gaps = 28/232 (12%)
Query: 3 SIVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLSALIVMTILSALVGWAA 62
S+ S +M +++EIGD+TF AA++AMRHP+ VLSG LSAL VMTILS +G
Sbjct: 80 SVFDALFSSFSMILVTEIGDETFIIAALMAMRHPKATVLSGALSALFVMTILSTGLGRIV 139
Query: 63 PNLVSRTWTHHITTFLFLGFGLWSLKEAIFEQGXXXXXXXXXXXXXKNWKAKNGASXXXX 122
PNL+SR T+ T L+ FGL L A W++ + S
Sbjct: 140 PNLISRKHTNSAATVLYAFFGLRLLYIA--------------------WRSTDSKSNQKK 179
Query: 123 XXXXXXXXXX--------RSFLSQFFSPIFLQAFSITFFGEWGDKSQLATIGLAADENPF 174
R S+F +PIFL++F +TF EWGD+SQ+ATI LA +N
Sbjct: 180 EMEEVEEKLESGQGKTPFRRLFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAI 239
Query: 175 GVVLGGILAQTLCTTAAVMGGKSLASQISEKVVALSGGVLFIVFGIQSFLSP 226
GV +G + T+CT+ AV+GG LAS+IS++ VA GG+LF+ F + S+ P
Sbjct: 240 GVAIGASIGHTVCTSLAVVGGSMLASRISQRTVATVGGLLFLGFSVSSYFYP 291
>AT4G13590.2 | Symbols: | Uncharacterized protein family (UPF0016)
| chr4:7901369-7903792 REVERSE LENGTH=359
Length = 359
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 117/226 (51%), Gaps = 24/226 (10%)
Query: 7 GFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLSALIVMTILSALVGWAAPNLV 66
GFT + ++ +SEIGDKTFF AA+LAM++ + LVL G + AL +MTILS ++G ++
Sbjct: 145 GFTAAFSLIFVSEIGDKTFFIAALLAMQYEKTLVLLGSMGALSLMTILSVVIGKIFQSVP 204
Query: 67 SRTWT-----HHITTFLFLGFGLWSLKEAIFEQGXXXXXXXXXXXXXKNWKAKNGASXXX 121
++ T + L + FGL S+K+A +AKNG
Sbjct: 205 AQFQTTLPIGEYAAIALLMFFGLKSIKDA---------------WDLPPVEAKNGEETGI 249
Query: 122 X--XXXXXXXXXXRSFLSQFFSP--IFLQAFSITFFGEWGDKSQLATIGLAADENPFGVV 177
+ +P I ++FS+ FF EWGD+S LAT+ L A ++P GV
Sbjct: 250 ELGEYSEAEELVKEKASKKLTNPLEILWKSFSLVFFAEWGDRSMLATVALGAAQSPLGVA 309
Query: 178 LGGILAQTLCTTAAVMGGKSLASQISEKVVALSGGVLFIVFGIQSF 223
G I + T A+MGG LA+ ISEK+V GG LF+VF +F
Sbjct: 310 SGAIAGHLVATVLAIMGGAFLANYISEKLVGYVGGALFLVFAAATF 355
>AT4G13590.1 | Symbols: | Uncharacterized protein family (UPF0016)
| chr4:7901369-7903792 REVERSE LENGTH=359
Length = 359
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 117/226 (51%), Gaps = 24/226 (10%)
Query: 7 GFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLSALIVMTILSALVGWAAPNLV 66
GFT + ++ +SEIGDKTFF AA+LAM++ + LVL G + AL +MTILS ++G ++
Sbjct: 145 GFTAAFSLIFVSEIGDKTFFIAALLAMQYEKTLVLLGSMGALSLMTILSVVIGKIFQSVP 204
Query: 67 SRTWT-----HHITTFLFLGFGLWSLKEAIFEQGXXXXXXXXXXXXXKNWKAKNGASXXX 121
++ T + L + FGL S+K+A +AKNG
Sbjct: 205 AQFQTTLPIGEYAAIALLMFFGLKSIKDA---------------WDLPPVEAKNGEETGI 249
Query: 122 X--XXXXXXXXXXRSFLSQFFSP--IFLQAFSITFFGEWGDKSQLATIGLAADENPFGVV 177
+ +P I ++FS+ FF EWGD+S LAT+ L A ++P GV
Sbjct: 250 ELGEYSEAEELVKEKASKKLTNPLEILWKSFSLVFFAEWGDRSMLATVALGAAQSPLGVA 309
Query: 178 LGGILAQTLCTTAAVMGGKSLASQISEKVVALSGGVLFIVFGIQSF 223
G I + T A+MGG LA+ ISEK+V GG LF+VF +F
Sbjct: 310 SGAIAGHLVATVLAIMGGAFLANYISEKLVGYVGGALFLVFAAATF 355
>AT1G64150.1 | Symbols: | Uncharacterized protein family (UPF0016)
| chr1:23809047-23812579 REVERSE LENGTH=370
Length = 370
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 102/234 (43%), Gaps = 45/234 (19%)
Query: 3 SIVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLSALIVMTILSALVGWAA 62
I GF + + SE+GDKTFF AA+LA R+ V G AL +MTI+S ++G
Sbjct: 154 DISSGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFVGTFGALGIMTIISVVLG--- 210
Query: 63 PNLVSRT--WTHHITTFLFLG----------------FGLWSLKEAIFEQGXXXXXXXXX 104
RT + + F F G FG+ +L +A+ ++G
Sbjct: 211 -----RTFHYVDEVLPFRFGGTDLPIDDIAAVCLLVYFGVSTLLDAVSDEGKADEEQKEA 265
Query: 105 XXXXKNWKAKNGASXXXXXXXXXXXXXXRSFLSQFFSPIFLQAFSITFFGEWGDKSQLAT 164
NGA + + F++ F EWGDKS +T
Sbjct: 266 ELAVSELSG-NGAGIVAA------------------ANTIISTFALVFVAEWGDKSFFST 306
Query: 165 IGLAADENPFGVVLGGILAQTLCTTAAVMGGKSLASQISEKVVALSGGVLFIVF 218
I LAA +P GV+ G + T AV+GG L + +SEK +A GGVLF+VF
Sbjct: 307 IALAAASSPLGVIAGALAGHGAATLLAVLGGSLLGNFLSEKAIAYVGGVLFLVF 360