Miyakogusa Predicted Gene
- Lj5g3v2193970.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2193970.1 tr|A9SZT1|A9SZT1_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_167322,49.58,1e-18,FAMILY NOT NAMED,NULL; B-Box-type
zinc finger,Zinc finger, B-box; seg,NULL; CCT,CCT domain;
zf-B_box,CUFF.56922.1
(422 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G25440.1 | Symbols: | B-box type zinc finger protein with CC... 266 3e-71
AT1G68520.1 | Symbols: | B-box type zinc finger protein with CC... 254 7e-68
AT1G73870.1 | Symbols: | B-box type zinc finger protein with CC... 166 2e-41
AT1G49130.1 | Symbols: | B-box type zinc finger protein with CC... 79 5e-15
AT1G49130.2 | Symbols: | B-box type zinc finger protein with CC... 79 5e-15
AT4G25990.1 | Symbols: CIL | CCT motif family protein | chr4:131... 69 7e-12
AT5G15840.1 | Symbols: CO, FG | B-box type zinc finger protein w... 66 5e-11
AT5G57180.2 | Symbols: CIA2 | chloroplast import apparatus 2 | c... 65 7e-11
AT5G15840.2 | Symbols: CO, FG | B-box type zinc finger protein w... 65 1e-10
AT3G02380.1 | Symbols: COL2, ATCOL2 | CONSTANS-like 2 | chr3:487... 62 8e-10
AT5G15850.1 | Symbols: COL1, ATCOL1 | CONSTANS-like 1 | chr5:517... 61 1e-09
AT5G14370.1 | Symbols: | CCT motif family protein | chr5:463214... 60 2e-09
AT2G24790.2 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 | chr2:105... 58 1e-08
AT2G24790.1 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 | chr2:105... 58 1e-08
AT1G07050.1 | Symbols: | CCT motif family protein | chr1:216432... 57 4e-08
AT5G24930.1 | Symbols: ATCOL4, COL4 | CONSTANS-like 4 | chr5:858... 56 4e-08
AT4G15250.1 | Symbols: | B-box type zinc finger protein with CC... 54 2e-07
AT3G21880.1 | Symbols: | B-box type zinc finger protein with CC... 52 9e-07
AT5G57660.1 | Symbols: ATCOL5, COL5 | CONSTANS-like 5 | chr5:233... 52 1e-06
AT3G07650.4 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 50 2e-06
AT3G07650.3 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 50 2e-06
AT3G07650.2 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 50 2e-06
AT3G07650.1 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 50 2e-06
AT1G68190.1 | Symbols: | B-box zinc finger family protein | chr... 50 3e-06
AT4G38960.1 | Symbols: | B-box type zinc finger family protein ... 50 4e-06
AT1G75540.1 | Symbols: STH2 | salt tolerance homolog2 | chr1:283... 50 4e-06
AT5G48250.1 | Symbols: | B-box type zinc finger protein with CC... 49 5e-06
AT2G21320.1 | Symbols: | B-box zinc finger family protein | chr... 49 8e-06
>AT1G25440.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:8933939-8935284 REVERSE LENGTH=417
Length = 417
Score = 266 bits (679), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 177/425 (41%), Positives = 229/425 (53%), Gaps = 46/425 (10%)
Query: 5 KNVANAVGGRTARACDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERVRLKTA 64
K++ANAVG +TARACDSC+ +RARWYCAADDAFLCQ+CDS VHSANPLARRHERVRLKTA
Sbjct: 3 KSLANAVGAKTARACDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRLKTA 62
Query: 65 SYKXXXXXXXXXXX---------XXFTKKARTPRQGKGMKQRNNPFH-LVPEVGLDEVXX 114
S FT+KARTPR G G K ++ FH LVP++ +++
Sbjct: 63 SPAVVKHSNHSSASPPHEVATWHHGFTRKARTPR-GSGKKNNSSIFHDLVPDISIED--- 118
Query: 115 XXXXXXXXXXQLLYRVPVYDPFVGAELCSTPXXXXXXXXXXXXXXXXXXXGPKVQEDYE- 173
QL+ +VPV DP V + + G ++E+ +
Sbjct: 119 -QTDNYELEEQLICQVPVLDPLVSEQFLND-------VVEPKIEFPMIRSGLMIEEEEDN 170
Query: 174 LESLQGILIPSDVELAEFAADVESLLGRGLENECMGMEELGLIDASKQEEWECXXXXXXX 233
ES P+D+EL EFAADVE+LLGRGL+ E MEELGL S E ++
Sbjct: 171 AESCLNGFFPTDMELEEFAADVETLLGRGLDTESYAMEELGL---SNSEMFKIEKDEIEE 227
Query: 234 XXXXXXXXXXXXXXMGRE----SISFELNFDYDDSLETCEDEVKEINGDDDMGKGSSELI 289
R+ ++ FEL+FDY+ S +T E+EV + + G+ ++
Sbjct: 228 EVEEIKAMSMDIFDDDRKDVDGTVPFELSFDYESSHKTSEEEV--MKNVESSGECVVKVK 285
Query: 290 KENGKRKI-LQLDYDAVIIAWSGQKSPWTTGAKPDLDLE-EFWP-----ECMGTCGTEVQ 342
+E K + L+L+YD+VI W GQ PW++G P+ D++ WP E G + Q
Sbjct: 286 EEEHKNVLMLRLNYDSVISTWGGQGPPWSSGEPPERDMDISGWPAFSMVENGGESTHQKQ 345
Query: 343 HPYGGEWSSGFGCHPAVMADGGXXXXXXXXXXXXXXXLFSKKIRYEVRKLNAEKRPRMKG 402
+ G SSGFG DGG LFSKKIRYEVRKLNAEKRPRMKG
Sbjct: 346 YVGGCLPSSGFG-------DGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKG 398
Query: 403 RFVKR 407
RFVKR
Sbjct: 399 RFVKR 403
>AT1G68520.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:25709331-25710749 REVERSE LENGTH=406
Length = 406
Score = 254 bits (649), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 176/427 (41%), Positives = 217/427 (50%), Gaps = 42/427 (9%)
Query: 5 KNVANAVGGRTARACDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERVRLKTA 64
K++A+AVGG+TARACDSC+ +RARWYCAADDAFLC ACD SVHSANPLARRHERVRLK+A
Sbjct: 3 KSLASAVGGKTARACDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSA 62
Query: 65 S---YKXXXXXXXXXXXXXFTKKARTPRQGKGMKQRNNPFH-LVPEVGLDEVXXXXXXXX 120
S Y+ FT+KARTPR GK K FH LVPE+ ++
Sbjct: 63 SAGKYRHASPPHQATWHQGFTRKARTPRGGK--KSHTMVFHDLVPEMSTED----QAESY 116
Query: 121 XXXXQLLYRVPVYDPFVGAELCSTPXXXXXXXXXXXXXXXXXXXGPKVQEDYELESLQGI 180
QL++ VPV + V E C ++D ES
Sbjct: 117 EVEEQLIFEVPVMNSMV-EEQCFN---QSLEKQNEFPMMPLSFKSSDEEDDDNAESCLNG 172
Query: 181 LIPSDVELAEFAADVESLLGRGLENECMGMEELGLIDASKQEEWECXXXXXXXXXXXXXX 240
L P+D+ELA+F ADVE+LLG G + E +EELGL + K
Sbjct: 173 LFPTDMELAQFTADVETLLGGG-DREFHSIEELGLGEMLK-------IEKEEVEEEGVVT 224
Query: 241 XXXXXXXMGRESISFELNFDYDDSLET------------CEDEVKEINGDDDMGKGSSEL 288
G E+ FE++FDY+ + +T V E+ G ++M G E
Sbjct: 225 REVHDQDEGDETSPFEISFDYEYTHKTTFDEGEEDEKEDVMKNVMEM-GVNEMSGGIKEE 283
Query: 289 IKENGKRKILQLDYDAVIIAWSGQKSPWT--TGAKPDLDLEEFWPECMGTCGTEVQHPYG 346
KE K +L+LDY++VI W GQ PWT ++ DLD+ F MG G E H
Sbjct: 284 KKE--KALMLRLDYESVISTWGGQGIPWTARVPSEIDLDMVCFPTHTMGESGAEAHHH-- 339
Query: 347 GEWSSGFGCHPAVMADGGXXXXXXXXXXXXXXXLFSKKIRYEVRKLNAEKRPRMKGRFVK 406
G G H DGG LFSKKIRYEVRKLNAEKRPRMKGRFVK
Sbjct: 340 -NHFRGLGLHLGDAGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVK 398
Query: 407 RASFAAA 413
R+S A
Sbjct: 399 RSSIGVA 405
>AT1G73870.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:27779214-27780522 FORWARD LENGTH=392
Length = 392
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 140/422 (33%), Positives = 185/422 (43%), Gaps = 77/422 (18%)
Query: 16 ARACDSCITK-RARWYCAADDAFLCQACDSSVHSANPLARRHERVRLKTASYKXXXXXXX 74
AR CD+C+ + RA WYC ADDAFLCQ+CD+S+HSAN LA+RHERVRL+++S
Sbjct: 19 ARGCDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRLQSSSPTETADKTT 78
Query: 75 XXXXXXFTKKARTPRQGKGMKQR------NNPFHLVPEVGLDEVXXXXXXXXXXXXQ--L 126
F +KARTPR ++ N+P LVPE+G DE + L
Sbjct: 79 SVWYEGFRRKARTPRSKSCAFEKLLQIESNDP--LVPELGGDEDDGFFSFSSVEETEESL 136
Query: 127 LYRVPVYDPFVGAEL------CSTPXXXXXXXXXXXXXXXXXXXGPKVQEDYELESLQGI 180
VPV+DPF + C P G + + E G
Sbjct: 137 NCCVPVFDPFSDMLIDDINGFCLVP-------DEVNNTTTNGELGEVEKAIMDDEGFMG- 188
Query: 181 LIPSDVELAEFAADVESLLGRGLENECMGMEELGLIDASKQEEWECXXXXXXXXXXXXXX 240
+P D++L + DVESLL E C+G +E + K+E
Sbjct: 189 FVPLDMDLEDLTMDVESLLEE--EQLCLGFKEPNDVGVIKEE------------------ 228
Query: 241 XXXXXXXMGRESISFELNFDYDDSLETCEDEVKEINGDDDMGKGSSELIKENGKRK---I 297
+ FE+N ++ ++E +E ++ K S + RK
Sbjct: 229 ----------NKVGFEINCKDLKRVKDEDEEEEEAKCENGGSKDSDREASNDKDRKTSLF 278
Query: 298 LQLDYDAVIIAWSGQKSPWTTGAKPDLDLEEFWPECMGTCGTEVQHPYGGEWSSGFGCHP 357
L+LDY AVI AW SPW TG K PECM T + H GG +
Sbjct: 279 LRLDYGAVISAWDNHGSPWKTGIK---------PECMLGGNTCLPHVVGG-YEKLMSSDG 328
Query: 358 AVM---------ADGGXXXXXXXXXXXXXXXLFSKKIRYEVRKLNAEKRPRMKGRFVKRA 408
+V +DG LFSKKIRYEVRKLNAE+RPR+KGRFVKR
Sbjct: 329 SVTRQQGRDGGGSDGEREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKRT 388
Query: 409 SF 410
S
Sbjct: 389 SL 390
>AT1G49130.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:18174741-18175936 REVERSE LENGTH=326
Length = 326
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 10/102 (9%)
Query: 17 RACDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERVRLKTASYKXXX---XXX 73
RAC+ C+ K A WYCA+DDAFLC CD SVHSAN +A +HERV L+T
Sbjct: 26 RACELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCLRTNEISNDVRGGTTL 85
Query: 74 XXXXXXXFTKKARTPR-------QGKGMKQRNNPFHLVPEVG 108
F +KARTPR Q K +R VPE+G
Sbjct: 86 TSVWHSGFRRKARTPRSRYEKKPQQKIDDERRREDPRVPEIG 127
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/29 (82%), Positives = 28/29 (96%)
Query: 380 LFSKKIRYEVRKLNAEKRPRMKGRFVKRA 408
LF KKIRYEVRK+NA+KRPRMKGRFV+R+
Sbjct: 293 LFEKKIRYEVRKVNADKRPRMKGRFVRRS 321
>AT1G49130.2 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:18174741-18175811 REVERSE LENGTH=319
Length = 319
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 10/102 (9%)
Query: 17 RACDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERVRLKTASYKXXX---XXX 73
RAC+ C+ K A WYCA+DDAFLC CD SVHSAN +A +HERV L+T
Sbjct: 19 RACELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCLRTNEISNDVRGGTTL 78
Query: 74 XXXXXXXFTKKARTPR-------QGKGMKQRNNPFHLVPEVG 108
F +KARTPR Q K +R VPE+G
Sbjct: 79 TSVWHSGFRRKARTPRSRYEKKPQQKIDDERRREDPRVPEIG 120
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/29 (82%), Positives = 28/29 (96%)
Query: 380 LFSKKIRYEVRKLNAEKRPRMKGRFVKRA 408
LF KKIRYEVRK+NA+KRPRMKGRFV+R+
Sbjct: 286 LFEKKIRYEVRKVNADKRPRMKGRFVRRS 314
>AT4G25990.1 | Symbols: CIL | CCT motif family protein |
chr4:13191937-13193543 REVERSE LENGTH=394
Length = 394
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 62/128 (48%), Gaps = 24/128 (18%)
Query: 285 SSELIKENGKRK-----ILQLDYDAVIIAWSGQKSPWTTGAKPDLDLEEFWPECMGTCGT 339
SSE+ N K + +L+LDYD V+ AWSG++SP F E +G+
Sbjct: 275 SSEVTDSNPKLEQRVSPLLKLDYDGVLEAWSGKESP-------------FSDEILGSDAD 321
Query: 340 EVQHPYGGEWSSGFGCHPAVMADGGXXXXXXXXXXXXXXXLFSKKIRYEVRKLNAEKRPR 399
G ++ G G LFSKKIRY+VRKLNA++RPR
Sbjct: 322 ------GVDFHVRLGEIDLFGESGMREASVLRYKEKRRNRLFSKKIRYQVRKLNADQRPR 375
Query: 400 MKGRFVKR 407
MKGRFV+R
Sbjct: 376 MKGRFVRR 383
>AT5G15840.1 | Symbols: CO, FG | B-box type zinc finger protein with
CCT domain | chr5:5171343-5172697 REVERSE LENGTH=373
Length = 373
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 8 ANAVGGRT--ARACDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERV 59
AN V R R C+SC A + C ADDA LC ACDS VHSANPLARRH+RV
Sbjct: 50 ANRVASRHKRVRVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRV 103
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 5 KNVANAVG---GRTARACDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERVRL 61
K +N +G AR CD+C + YC AD A+LC +CD+ VHSAN +A RH+RVR+
Sbjct: 3 KQESNDIGSGENNRARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRV 62
>AT5G57180.2 | Symbols: CIA2 | chloroplast import apparatus 2 |
chr5:23168393-23170763 FORWARD LENGTH=435
Length = 435
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 54/112 (48%), Gaps = 23/112 (20%)
Query: 297 ILQLDYDAVIIAWSGQKSPWTTGAKPDLDLEEFWPECMGTCGTEVQHPYGGEWSSGFGCH 356
+L+LDYD V+ AWS + SP+ PD E G+ +V
Sbjct: 336 LLKLDYDGVLEAWSDKTSPF-----PD--------EIQGSEAVDVNARL---------AQ 373
Query: 357 PAVMADGGXXXXXXXX-XXXXXXXLFSKKIRYEVRKLNAEKRPRMKGRFVKR 407
+ D G LFSKKIRY+VRKLNA++RPRMKGRFV+R
Sbjct: 374 IDLFGDSGMREASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGRFVRR 425
>AT5G15840.2 | Symbols: CO, FG | B-box type zinc finger protein with
CCT domain | chr5:5171873-5172697 REVERSE LENGTH=274
Length = 274
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 8 ANAVGGRT--ARACDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERV 59
AN V R R C+SC A + C ADDA LC ACDS VHSANPLARRH+RV
Sbjct: 50 ANRVASRHKRVRVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRV 103
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 5 KNVANAVG---GRTARACDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERVRL 61
K +N +G AR CD+C + YC AD A+LC +CD+ VHSAN +A RH+RVR+
Sbjct: 3 KQESNDIGSGENNRARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRV 62
>AT3G02380.1 | Symbols: COL2, ATCOL2 | CONSTANS-like 2 |
chr3:487438-488624 REVERSE LENGTH=347
Length = 347
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%)
Query: 12 GGRTARACDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERVRL 61
G ARACD+C + YC AD A+LC CD+ VH+AN +A RHERVR+
Sbjct: 9 SGTWARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRV 58
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 6 NVANAVGGRT--ARACDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERV 59
+ AN V R R C SC + A + C AD A LC ACD+ +HSANPLARRH+RV
Sbjct: 44 HAANRVASRHERVRVCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRV 99
>AT5G15850.1 | Symbols: COL1, ATCOL1 | CONSTANS-like 1 |
chr5:5176297-5177473 REVERSE LENGTH=355
Length = 355
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 34/46 (73%)
Query: 16 ARACDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERVRL 61
A+ACD+C + YC AD A+LC +CD+ VH+AN LA RHERVR+
Sbjct: 9 AQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRV 54
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 6 NVANAVGGR--TARACDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERV 59
+ AN + R R C SC A ++C AD A LC CDS +HSANPLARRH+RV
Sbjct: 40 HAANRLASRHERVRVCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRV 95
>AT5G14370.1 | Symbols: | CCT motif family protein |
chr5:4632147-4633651 REVERSE LENGTH=339
Length = 339
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Query: 298 LQLDYDAVIIAWSGQKSPWTTGAKPDLDLEEFWPECMGTC-GTEVQHPYGGEWSSGFGCH 356
L+LDY+ ++ AWS + + + G P + P+ + G G W+
Sbjct: 231 LKLDYEQIMEAWSDKGTLYVDGEPP-----QTVPDLHASADGFNDGGEAGNLWAVPEMET 285
Query: 357 PAVMADGGXXXXXXXXXXXXXXXLFSKKIRYEVRKLNAEKRPRMKGRFVKR 407
+ G LFSK+IRY+VRKLNAEKRPR+KGRFVKR
Sbjct: 286 TERLWRGHREASLLRYKEKRQNRLFSKRIRYQVRKLNAEKRPRVKGRFVKR 336
>AT2G24790.2 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 |
chr2:10566959-10567621 FORWARD LENGTH=220
Length = 220
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 32/49 (65%)
Query: 13 GRTARACDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERVRL 61
++R CDSC + A +C AD AFLC CD +H+AN LA RHERV L
Sbjct: 2 ASSSRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL 50
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 6 NVANAVGGRTARA--CDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERV 59
+ AN + R R C+ C A C AD A LC CD +HSANPL+RRHERV
Sbjct: 36 HTANKLASRHERVWLCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERV 91
>AT2G24790.1 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 |
chr2:10566959-10567946 FORWARD LENGTH=294
Length = 294
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 32/47 (68%)
Query: 15 TARACDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERVRL 61
++R CDSC + A +C AD AFLC CD +H+AN LA RHERV L
Sbjct: 4 SSRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL 50
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 6 NVANAVGGRTARA--CDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERV 59
+ AN + R R C+ C A C AD A LC CD +HSANPL+RRHERV
Sbjct: 36 HTANKLASRHERVWLCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERV 91
>AT1G07050.1 | Symbols: | CCT motif family protein |
chr1:2164327-2165133 REVERSE LENGTH=195
Length = 195
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 28/30 (93%)
Query: 380 LFSKKIRYEVRKLNAEKRPRMKGRFVKRAS 409
LFSKKIRY+VRKLNA+KRPR KGRFVKR +
Sbjct: 166 LFSKKIRYQVRKLNADKRPRFKGRFVKRET 195
>AT5G24930.1 | Symbols: ATCOL4, COL4 | CONSTANS-like 4 |
chr5:8589325-8590949 FORWARD LENGTH=406
Length = 406
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 3 STKNVANAVGGRTARA--CDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERV 59
S + AN + R AR C+ C A C AD A LC CD +HSANPLARRHERV
Sbjct: 75 SKVHAANKLASRHARVWMCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERV 133
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 30/44 (68%)
Query: 16 ARACDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERV 59
++ CDSC + A YC D AFLC +CDS VH+AN LA RH RV
Sbjct: 47 SKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARV 90
>AT4G15250.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr4:8709942-8711106 REVERSE LENGTH=330
Length = 330
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 30/43 (69%)
Query: 19 CDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERVRL 61
CD C T++A YC +D A LC CD +VHSANPL++RH R L
Sbjct: 5 CDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLL 47
>AT3G21880.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr3:7706748-7708093 FORWARD LENGTH=364
Length = 364
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 26/40 (65%)
Query: 19 CDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHER 58
CD C T +A YC +D A LC CD VHSANPL+ RH R
Sbjct: 5 CDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIR 44
>AT5G57660.1 | Symbols: ATCOL5, COL5 | CONSTANS-like 5 |
chr5:23355573-23356729 FORWARD LENGTH=355
Length = 355
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 30/45 (66%)
Query: 19 CDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERVRLKT 63
C+ C A C AD A LC +CD+ +HSANPLA RHERV ++T
Sbjct: 61 CEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERVPVET 105
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 13 GRTARACDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERV 59
G AR+CD+C + A +C D AFLC ACD+ +HS RHERV
Sbjct: 16 GAAARSCDACKSVTAAVFCRVDSAFLCIACDTRIHSFT----RHERV 58
>AT3G07650.4 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 28/41 (68%)
Query: 19 CDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERV 59
CD C +R+ YC +D A LC +CD SVHSAN L++RH R
Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRT 45
>AT3G07650.3 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 28/41 (68%)
Query: 19 CDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERV 59
CD C +R+ YC +D A LC +CD SVHSAN L++RH R
Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRT 45
>AT3G07650.2 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 28/41 (68%)
Query: 19 CDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERV 59
CD C +R+ YC +D A LC +CD SVHSAN L++RH R
Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRT 45
>AT3G07650.1 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 28/41 (68%)
Query: 19 CDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERV 59
CD C +R+ YC +D A LC +CD SVHSAN L++RH R
Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRT 45
>AT1G68190.1 | Symbols: | B-box zinc finger family protein |
chr1:25559384-25561004 FORWARD LENGTH=356
Length = 356
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 27/45 (60%)
Query: 17 RACDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERVRL 61
R C+ C RA YC AD A LC CD+ VHSAN L+ RH R L
Sbjct: 12 RVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVL 56
>AT4G38960.1 | Symbols: | B-box type zinc finger family protein |
chr4:18161576-18163045 FORWARD LENGTH=183
Length = 183
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 28/47 (59%)
Query: 19 CDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERVRLKTAS 65
CD+C A +CAAD+A LC+ CD VH N LA RH RV L S
Sbjct: 5 CDACENAAAIIFCAADEAALCRPCDEKVHMCNKLASRHVRVGLAEPS 51
>AT1G75540.1 | Symbols: STH2 | salt tolerance homolog2 |
chr1:28366059-28367398 FORWARD LENGTH=331
Length = 331
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 19 CDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERVRL 61
CD C K+A +C D A LC+ CDSS+H+AN ++H+R L
Sbjct: 60 CDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLL 102
>AT5G48250.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr5:19561719-19563113 REVERSE LENGTH=373
Length = 373
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 19 CDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERV 59
CD C +R+ YC +D A LC +CD +VHSAN L++RH R
Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRT 45
>AT2G21320.1 | Symbols: | B-box zinc finger family protein |
chr2:9126502-9127652 FORWARD LENGTH=172
Length = 172
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 29/47 (61%)
Query: 19 CDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHERVRLKTAS 65
CD+C + A +CAAD+A LC +CD VH N LA RH RV L S
Sbjct: 5 CDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPS 51