Miyakogusa Predicted Gene

Lj5g3v2182400.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2182400.1 Non Chatacterized Hit- tr|K3XSI4|K3XSI4_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si004883,27.39,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; seg,NULL; Protein kinase-like (PK-like),Protein
kin,CUFF.56951.1
         (368 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G18390.2 | Symbols:  | Protein kinase superfamily protein | c...   121   1e-27
AT1G18390.1 | Symbols:  | Protein kinase superfamily protein | c...    98   8e-21
AT1G25390.1 | Symbols:  | Protein kinase superfamily protein | c...    61   1e-09
AT1G67000.1 | Symbols:  | Protein kinase superfamily protein | c...    60   2e-09
AT5G38210.1 | Symbols:  | Protein kinase family protein | chr5:1...    59   7e-09
AT1G66880.1 | Symbols:  | Protein kinase superfamily protein | c...    57   2e-08
AT1G69910.1 | Symbols:  | Protein kinase superfamily protein | c...    53   3e-07
AT4G21380.1 | Symbols: ARK3, RK3 | receptor kinase 3 | chr4:1138...    51   1e-06
AT1G79620.1 | Symbols:  | Leucine-rich repeat protein kinase fam...    49   5e-06
AT1G66930.1 | Symbols:  | Protein kinase superfamily protein | c...    49   8e-06

>AT1G18390.2 | Symbols:  | Protein kinase superfamily protein |
           chr1:6327463-6329935 FORWARD LENGTH=654
          Length = 654

 Score =  121 bits (303), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 115/244 (47%), Gaps = 17/244 (6%)

Query: 14  LLHVHIIIFYLLTRTTLCSVDPTFEACEPKTCGN-QSISYPFYIEGTQQPFCGYPGFGIS 72
           LL+  I  ++ +  T   S+DP F+ACEPK+CG    ISYPFY+ G Q+ FCGYP F ++
Sbjct: 8   LLYTSIFFYFTIIATQTLSLDPKFKACEPKSCGKGPQISYPFYLSGKQESFCGYPSFELT 67

Query: 73  C-SRNGFPILNLSNTQYIINQIFYENQSIRVSNAEFSRSNTSISCFSHPLKNLTLPSV-F 130
           C      P+L +S  +Y+I  I Y  QS +V N++ S       C   PL NLTL    F
Sbjct: 68  CDDEEKLPVLGISGEEYVIKNISYLTQSFQVVNSKASHD----PC-PRPLNNLTLHRTPF 122

Query: 131 HLVPEQKEVVLFFGCDELPSLPRELRERAIGCSEGSVKGSVLALYEGD---KNLSSASPS 187
            + P      + + C +   L  + R   + C+  +       +++     K    AS S
Sbjct: 123 FVNPSHINFTILYNCSD--HLLEDFRTYPLTCARNTSLLRSFGVFDRKKLGKEKQIASMS 180

Query: 188 CKXXXX--XXXXXXXXXXXXXXXAALRKGLLLNWIASDCGVCNSTGGRCGFDSEIYTFRC 245
           C+                       L++G +LNW A+ C  C ++GGRCG D +   F C
Sbjct: 181 CQKLVDVPVLASNESDVMGMTYVEILKRGFVLNWTANSCFRCITSGGRCGTDQQ--EFVC 238

Query: 246 YCAD 249
            C D
Sbjct: 239 LCPD 242



 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 31/38 (81%), Positives = 35/38 (92%)

Query: 331 GVPLFSYEELKKATNNFDHTKELGDGGFGTVYYGKLLD 368
           GV +FSYEEL++ATNNFD +KELGDGGFGTVYYGKL D
Sbjct: 328 GVHIFSYEELEEATNNFDPSKELGDGGFGTVYYGKLKD 365


>AT1G18390.1 | Symbols:  | Protein kinase superfamily protein |
           chr1:6325876-6329935 FORWARD LENGTH=648
          Length = 648

 Score = 98.2 bits (243), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 136/362 (37%), Gaps = 50/362 (13%)

Query: 32  SVDPTFEACEPK--TCGN-----QSISYPFYIEGTQQPFCGYPGFGISCSRNGFPILNLS 84
           S D  +E C  +  TCG+     +S +YPF+    +  FCG+  F +SC  +    L + 
Sbjct: 23  SADQQYEECRSRNLTCGSGHRVFESTTYPFWGGFNKPKFCGHSSFKLSCEGDQNLTLAIG 82

Query: 85  NTQYIINQIFYENQSIRVSNAEFSRSNTSISCFSHPLKNLTLPSVFHLVPEQKEVVLFFG 144
           N    +     E+  I V++           C +  + N    + F L    + + +F  
Sbjct: 83  NITLRVVSANLEDHKISVADDSLLDG----GCLN--IWNFNGKNQFTLDSNTETIDVFVN 136

Query: 145 CDELPSLPRELRE-----------RAIGCSEGSVKGSVLALYEGDKNLSSASPSCKXXXX 193
           C  +  L     E           R+    EG +K + + +    K+    S        
Sbjct: 137 CSGVAPLQISCEESYEDPVTYHVLRSSDSDEGCMKYAEIPMLRSAKDELQRSE------- 189

Query: 194 XXXXXXXXXXXXXXXAALRKGLLLNWIASD--CGVCNSTGGRCGFDSEIYTFRCYCADRV 251
                           ALRKG  L +I  D  C  C  +GG CG   +  +FRC CADR 
Sbjct: 190 -----------LTFVEALRKGFDLRYIMEDKACRRCIDSGGICGSALDSESFRCLCADRP 238

Query: 252 HAKHCVPDPVPEQKGLSRNAKLAXXXXXXXXXXXXXXXXXXXXXXCKRKHVTSGGHF--- 308
           H   C  D   + K   R   +                         R+   S  +    
Sbjct: 239 HNSSC-DDNTNQGKNDKRRRVIVKVLIGASAAVVGLIAASIFWYVYHRRKTKSYRNSSAL 297

Query: 309 --QXXXXXXXXXXXXXXXXXXAYFGVPLFSYEELKKATNNFDHTKELGDGGFGTVYYGKL 366
             +                     GV +FSYEEL++ATNNFD +KELGDGGFGTVYYGKL
Sbjct: 298 LPRNISSDPSAKSFDIEKAEELLVGVHIFSYEELEEATNNFDPSKELGDGGFGTVYYGKL 357

Query: 367 LD 368
            D
Sbjct: 358 KD 359


>AT1G25390.1 | Symbols:  | Protein kinase superfamily protein |
           chr1:8906640-8908800 REVERSE LENGTH=629
          Length = 629

 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 25/41 (60%), Positives = 33/41 (80%)

Query: 328 AYFGVPLFSYEELKKATNNFDHTKELGDGGFGTVYYGKLLD 368
            +F +P+FSY+EL+ AT+NF   + LGDGGFGTVYYGK+ D
Sbjct: 272 VFFKIPIFSYKELQAATDNFSKDRLLGDGGFGTVYYGKVRD 312


>AT1G67000.1 | Symbols:  | Protein kinase superfamily protein |
           chr1:25004217-25007604 REVERSE LENGTH=892
          Length = 892

 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 97/232 (41%), Gaps = 21/232 (9%)

Query: 32  SVDPTFEAC-EPKTCGNQ-SISYPFYIEGTQQPFCGYPGFGISCSRNGFPILNLSNTQYI 89
           S D  +  C E  +CG+Q  ++YP +  G ++  CG+P F ++CS  GF  +N+++ ++ 
Sbjct: 246 SADEVYRRCSESFSCGSQRDLNYPLWKPGREE--CGHPNFKLNCS-GGFAEINIASVKFR 302

Query: 90  INQIFYENQSIRVSNAEFSRSNTSISCFSHPLKNLTLPSVFHLVPEQKEVVLFFGCD-EL 148
           I   +     IR++ +++       +  + P     LP V  L  E + + L++GC    
Sbjct: 303 ILDSY--RSLIRLARSDYIGDLCPANPLTAPFIEKFLP-VLELTGETELLTLYYGCRFNS 359

Query: 149 PSLPRELRERAIGCSEGS-----------VKGSVLALYEGDKNLSSASPSCKXXXXXXXX 197
             +P  +    +GC EG            +  S   +    + +   + S          
Sbjct: 360 SDIPANIYVGELGCDEGRSYYVTRNLSSPLLDSSRGVLNNLREMCKRNVSVPASGPALFD 419

Query: 198 XXXXXXXXXXXAALRKGLLLNWIASDCGVCNSTGGRCGFDSEIYTFRCYCAD 249
                       AL +G  +  I SDC  C  +GG CG++     F CYC D
Sbjct: 420 LQTRPNQDNLKMALDQGFRM-LITSDCERCRGSGGACGYNQTSSGFGCYCKD 470



 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 80/196 (40%), Gaps = 16/196 (8%)

Query: 45  CGNQSISYPFYIEGTQQPFCGYPGFGISCSRNGFPILNLSNTQYIINQIFYENQSIRVSN 104
           CGN +  +PF+     +P CG+P   + C+ N    L +SN ++ + QI   + ++ ++ 
Sbjct: 40  CGNITADFPFWGGNRHKP-CGHPLLELHCNNNNITSLYISNQEFYVRQINQTSNTLTLAR 98

Query: 105 AEFSRSNTSISCFSHPLKNLTL-PSVFHLVPEQKEVVLFFGCDELPSLPRELRERAIGCS 163
           ++   S     C S+     TL P +F L P  K + + + CD  P L            
Sbjct: 99  SDLLGS----FCSSYAYNTTTLPPEIFELSPTYKSLTVLYHCD--PKLSYRSSYTCPALG 152

Query: 164 EGSVKGSVLALYEGDKNLSSASPSCKXXXXXXXXXXXXXXXXXXXAALRKGLLLNWIASD 223
             S+  SV   Y    + +   P+                     +ALRKG  +  +  +
Sbjct: 153 TFSMSQSVDYQYSCQNSFTVNVPT------SFHPEERGLNLTNLESALRKGFEVKLVIDE 206

Query: 224 --CGVCNSTGGRCGFD 237
             C  C+ST G C F+
Sbjct: 207 IPCQQCSSTRGICSFN 222


>AT5G38210.1 | Symbols:  | Protein kinase family protein |
           chr5:15261035-15265376 FORWARD LENGTH=686
          Length = 686

 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 28/41 (68%), Positives = 33/41 (80%), Gaps = 2/41 (4%)

Query: 328 AYFGVPLFSYEELKKATNNFDHTKELGDGGFGTVYYGKLLD 368
            Y G+ +FSYEEL++AT NF  +KELGDGGFGTVYYG L D
Sbjct: 341 VYSGIQVFSYEELEEATENF--SKELGDGGFGTVYYGTLKD 379


>AT1G66880.1 | Symbols:  | Protein kinase superfamily protein |
           chr1:24946928-24955438 FORWARD LENGTH=1296
          Length = 1296

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/40 (70%), Positives = 33/40 (82%), Gaps = 2/40 (5%)

Query: 329 YFGVPLFSYEELKKATNNFDHTKELGDGGFGTVYYGKLLD 368
           Y GV +FSYEEL++AT NF  ++ELGDGGFGTVYYG L D
Sbjct: 951 YCGVQVFSYEELEEATENF--SRELGDGGFGTVYYGVLKD 988


>AT1G69910.1 | Symbols:  | Protein kinase superfamily protein |
           chr1:26330166-26332076 FORWARD LENGTH=636
          Length = 636

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 30/36 (83%)

Query: 333 PLFSYEELKKATNNFDHTKELGDGGFGTVYYGKLLD 368
           P+F++EEL+ ATN FD  +++GDGGFG+VY G+L D
Sbjct: 310 PVFTFEELESATNKFDPKRKIGDGGFGSVYLGQLSD 345


>AT4G21380.1 | Symbols: ARK3, RK3 | receptor kinase 3 |
           chr4:11389219-11393090 REVERSE LENGTH=850
          Length = 850

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 332 VPLFSYEELKKATNNFDHTKELGDGGFGTVYYGKLLD 368
           +PL  +EE+  ATNNF +  +LG GGFG VY GKLLD
Sbjct: 511 LPLMEFEEVAMATNNFSNANKLGQGGFGIVYKGKLLD 547


>AT1G79620.1 | Symbols:  | Leucine-rich repeat protein kinase family
           protein | chr1:29957633-29962174 REVERSE LENGTH=971
          Length = 971

 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/38 (63%), Positives = 26/38 (68%)

Query: 331 GVPLFSYEELKKATNNFDHTKELGDGGFGTVYYGKLLD 368
           G   FSYEELKK TNNF  + ELG GG+G VY G L D
Sbjct: 622 GARWFSYEELKKITNNFSVSSELGYGGYGKVYKGMLQD 659


>AT1G66930.1 | Symbols:  | Protein kinase superfamily protein |
           chr1:24970523-24973069 FORWARD LENGTH=674
          Length = 674

 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 62/117 (52%), Gaps = 10/117 (8%)

Query: 32  SVDPTFEACEPK-TCGNQ-SISYPFYIEGTQQPFCGYPGFGISCSRNGFPILNLSNTQYI 89
           S D     C  + +CGNQ ++ YPF+I G +  +CG+P F + CS  GF  LN+++  + 
Sbjct: 63  SADELRRRCSERFSCGNQRNLYYPFWIPGRE--YCGHPDFKLDCS-GGFAELNIASVNFR 119

Query: 90  INQIFYENQSIRVSNAEFSRSNTSISCFSHPLKNLTL-PSVFHLVPEQKEVVLFFGC 145
           I  + Y++ + R++ +++        C  +PL +  L  +V     + + + L++ C
Sbjct: 120 ILNMSYDSSNKRLARSDYLND----LCPPNPLNDEPLIETVLQFSADTELLTLYYDC 172