Miyakogusa Predicted Gene

Lj5g3v2182140.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2182140.1 Non Chatacterized Hit- tr|B9SM05|B9SM05_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,68.42,0.000003,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; DUF1218,Protein of unknown function DUF12,CUFF.56870.1
         (193 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G68220.1 | Symbols:  | Protein of unknown function (DUF1218) ...   211   3e-55
AT1G52910.1 | Symbols:  | Protein of unknown function (DUF1218) ...   149   2e-36
AT4G27435.1 | Symbols:  | Protein of unknown function (DUF1218) ...   144   3e-35
AT3G15480.1 | Symbols:  | Protein of unknown function (DUF1218) ...   139   2e-33
AT1G61065.1 | Symbols:  | Protein of unknown function (DUF1218) ...   131   3e-31
AT1G13380.1 | Symbols:  | Protein of unknown function (DUF1218) ...   119   1e-27
AT5G17210.1 | Symbols:  | Protein of unknown function (DUF1218) ...    70   8e-13
AT5G17210.2 | Symbols:  | Protein of unknown function (DUF1218) ...    69   2e-12

>AT1G68220.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr1:25570322-25571562 FORWARD LENGTH=201
          Length = 201

 Score =  211 bits (536), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 101/171 (59%), Positives = 131/171 (76%), Gaps = 4/171 (2%)

Query: 24  GAERRRSEAKVVPDEYDDQTYCRYTTDASTVYGLAAFLILLLSHGILNVVTRCFCCGKGL 83
           GAERRRS A  VPD+YD++T C+Y T+ASTVYG++AF +LL+S  ++N VT+C C GKGL
Sbjct: 24  GAERRRSTAVPVPDQYDEKTICKYGTEASTVYGMSAFGLLLVSQAVVNGVTKCLCFGKGL 83

Query: 84  VSGCS-TTFAILFYILSWLSFLGAEACLLAGSAKNAYHTKYRRDFGAHDLSCSTLRKGVF 142
           V+G S T +AI+F+++SW+SFLGAEACLL GSA+NAYHTK    +   +LSC+ L  GVF
Sbjct: 84  VTGTSYTVWAIVFFVVSWVSFLGAEACLLGGSARNAYHTKSEGIYKGKELSCAVLPVGVF 143

Query: 143 AAGAALTLFSMLVSILYYWAHSKADTGFWEKHRNEGLGLATHHQGADSDKP 193
           AAGAA TL S++ +ILYY AHSKADTG WEKH+N+G+ +        SD P
Sbjct: 144 AAGAAFTLMSLIATILYYLAHSKADTGGWEKHQNDGINIG---MTTPSDAP 191


>AT1G52910.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr1:19708114-19709128 FORWARD LENGTH=175
          Length = 175

 Score =  149 bits (375), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 73/151 (48%), Positives = 99/151 (65%), Gaps = 1/151 (0%)

Query: 25  AERRRSEAKVVPDEYDDQTYCRYTTDASTVYGLAAFLILLLSHGILNVVTRCFCCGKGLV 84
           AE+RRS  KVVPD   +  +C Y +D +T YG  AF++L +S  I+ V +RCFCCGK L 
Sbjct: 24  AEQRRSVGKVVPDGEKEFEHCEYGSDIATSYGAGAFVLLFISQVIIMVASRCFCCGKALK 83

Query: 85  SGCSTTFAILFYILSWLSFLGAEACLLAGSAKNAYHTKYRRDFGAHD-LSCSTLRKGVFA 143
            G S    I+ +++ W+ FL AE CLLAGS +NAYHT YRR +   +  SC  +RKGVFA
Sbjct: 84  PGGSRACGIMLFLICWVFFLIAEVCLLAGSIRNAYHTTYRRMWNIENPPSCEVIRKGVFA 143

Query: 144 AGAALTLFSMLVSILYYWAHSKADTGFWEKH 174
           AGA+  LF+ +VS  YY ++S+A  G+   H
Sbjct: 144 AGASFALFTAIVSQFYYISYSRARDGYQTPH 174


>AT4G27435.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr4:13723903-13724872 FORWARD LENGTH=173
          Length = 173

 Score =  144 bits (364), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 72/143 (50%), Positives = 94/143 (65%)

Query: 24  GAERRRSEAKVVPDEYDDQTYCRYTTDASTVYGLAAFLILLLSHGILNVVTRCFCCGKGL 83
            AE+RRS A+VV D      YC Y +D +T YG+ AFL  + S  ++ +V+RCFCCGK L
Sbjct: 23  AAEQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFLFSVASQILIMLVSRCFCCGKPL 82

Query: 84  VSGCSTTFAILFYILSWLSFLGAEACLLAGSAKNAYHTKYRRDFGAHDLSCSTLRKGVFA 143
             G S   A++ +I+SW+ FL AE CLLAGS +NAYHTKYR  F  +   C TLRKGVFA
Sbjct: 83  KPGGSRALALILFIVSWMFFLIAEICLLAGSVENAYHTKYRTMFMDNPPDCQTLRKGVFA 142

Query: 144 AGAALTLFSMLVSILYYWAHSKA 166
           AGA+   F+ +VS  YY+ +  A
Sbjct: 143 AGASFVFFNAIVSQFYYFFYFSA 165


>AT3G15480.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr3:5226489-5227666 REVERSE LENGTH=175
          Length = 175

 Score =  139 bits (349), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 71/148 (47%), Positives = 94/148 (63%), Gaps = 1/148 (0%)

Query: 24  GAERRRSEAKVVPDEYDDQTYCRYTTDASTVYGLAAFLILLLSHGILNVVTRCFCCGKGL 83
            AE+RRS  KV  D      YC Y TD +T YG  AF++L +S  ++   +RCFCCGK L
Sbjct: 23  AAEQRRSVGKVETDRDKQYDYCVYGTDIATSYGAGAFVLLFVSQVLIMAASRCFCCGKSL 82

Query: 84  VSGCSTTFAILFYILSWLSFLGAEACLLAGSAKNAYHTKYRRDFGAHD-LSCSTLRKGVF 142
             G S   AI+ +++ W+ FL AE CLLA S +NAYHT+YR+ +   D  SC  +RKGVF
Sbjct: 83  NPGGSRACAIILFLICWVFFLIAEMCLLAASIRNAYHTQYRKMWKVEDPPSCEVIRKGVF 142

Query: 143 AAGAALTLFSMLVSILYYWAHSKADTGF 170
           AAGAA TLF+ +VS  YY  +S+A   +
Sbjct: 143 AAGAAFTLFTAIVSQFYYVCYSRARDAY 170


>AT1G61065.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr1:22490430-22491330 REVERSE LENGTH=180
          Length = 180

 Score =  131 bits (329), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 100/159 (62%), Gaps = 3/159 (1%)

Query: 25  AERRRSEAKVVPDEYDDQTYCRYTTDASTVYGLAAFLILLLSHGILNVVTRCFCCGKGLV 84
           AE+RR+  ++   E  D +YC Y  D +T  G+ +FL+LL S  ++ V +RC CCG+ L 
Sbjct: 24  AEQRRTTWQI-SRESRDLSYCVYDKDIATGLGVGSFLVLLASQLLIMVASRCLCCGRALT 82

Query: 85  SGCSTTFAILFYILSWLSFLGAEACLLAGSAKNAYHTKYRRDFGAHDLSCSTLRKGVFAA 144
              S ++AI  +I +W+ F  A+ CLLAGS +NAYHTKYR  FG    SC +LRKGVF A
Sbjct: 83  PSGSRSWAIFLFITTWVFFFIAQVCLLAGSVRNAYHTKYRVYFGNTSPSCRSLRKGVFGA 142

Query: 145 GAALTLFSMLVSILYYWAHSKADTGFWEKHRNEGLGLAT 183
           GAA  + + +VS LYY   S+A    ++  R+ G+ +++
Sbjct: 143 GAAFIVLTGIVSELYYVTLSRAKD--FQPSRDPGIRMSS 179


>AT1G13380.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr1:4589218-4590362 REVERSE LENGTH=188
          Length = 188

 Score =  119 bits (298), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/142 (44%), Positives = 94/142 (66%), Gaps = 3/142 (2%)

Query: 25  AERRRSEAKVVPDEYDDQTYCRYTTDASTVYGLAAFLILLLSHGILNVVTRCFCCGKGLV 84
           AERRRS  K + D   + T+C Y +D +T YG+ AFL LL S  +L  VT+C C G+ L 
Sbjct: 28  AERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGAFLFLLSSESLLMSVTKCMCFGRPLA 87

Query: 85  SGCSTTFAILFYILSWLSFLGAEACLLAGSAKNAYHTKYRRDFGAHDLSCSTLRKGVFAA 144
            G    ++I+++I SW++FL AEAC++AG+ KNAYHTKY     +   SC++LRKG+F A
Sbjct: 88  PGSDRAWSIIYFISSWMTFLVAEACVIAGATKNAYHTKY---LSSQTFSCASLRKGIFIA 144

Query: 145 GAALTLFSMLVSILYYWAHSKA 166
           GA   + +M++++ YY   +K+
Sbjct: 145 GAVFIVATMVLNVYYYMYFTKS 166


>AT5G17210.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr5:5656519-5657970 FORWARD LENGTH=209
          Length = 209

 Score = 70.1 bits (170), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 6/156 (3%)

Query: 28  RRSEAKVVPDEYDDQTYCRYTTDASTVYGLAAFLILLLSHGILNVVTRCFCCGKGLVSGC 87
           +RS+  V     D  T C Y    +   G  + L L+++  I++V + CFCC KG     
Sbjct: 32  KRSQVTVTVS--DSITKCTYPRSPAFNLGFTSALFLMMAQIIVSVSSGCFCCRKGPAPSR 89

Query: 88  ST-TFAILFYILSWLSFLGAEACLLAGSAKNAYHTKYRRDFGAHDLSCSTLRKGVFAAGA 146
           S    +++ +++SW +F+ A   LL+G+A N  HT+   + G +   C  ++ GVF+ GA
Sbjct: 90  SNWIISLICFVVSWFTFVIAFLVLLSGAALNDEHTEESMNAGTY--FCYIVKPGVFSTGA 147

Query: 147 ALTLFSMLVSILYYWAHSKADTGFWEKHRNEGLGLA 182
            L+L ++ + I+YY   + ++         +G G+A
Sbjct: 148 VLSLVTIALGIVYYLCLT-SNKQIVAATTTQGTGIA 182


>AT5G17210.2 | Symbols:  | Protein of unknown function (DUF1218) |
           chr5:5656700-5657970 FORWARD LENGTH=175
          Length = 175

 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 3/122 (2%)

Query: 40  DDQTYCRYTTDASTVYGLAAFLILLLSHGILNVVTRCFCCGKGLVSGCST-TFAILFYIL 98
           D  T C Y    +   G  + L L+++  I++V + CFCC KG     S    +++ +++
Sbjct: 8   DSITKCTYPRSPAFNLGFTSALFLMMAQIIVSVSSGCFCCRKGPAPSRSNWIISLICFVV 67

Query: 99  SWLSFLGAEACLLAGSAKNAYHTKYRRDFGAHDLSCSTLRKGVFAAGAALTLFSMLVSIL 158
           SW +F+ A   LL+G+A N  HT+   + G +   C  ++ GVF+ GA L+L ++ + I+
Sbjct: 68  SWFTFVIAFLVLLSGAALNDEHTEESMNAGTY--FCYIVKPGVFSTGAVLSLVTIALGIV 125

Query: 159 YY 160
           YY
Sbjct: 126 YY 127