Miyakogusa Predicted Gene

Lj5g3v2179660.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2179660.1 Non Chatacterized Hit- tr|C6T177|C6T177_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2 S,66.28,7e-19,
,CUFF.56844.1
         (92 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G68185.1 | Symbols:  | Ubiquitin-like superfamily protein | c...    62   6e-11

>AT1G68185.1 | Symbols:  | Ubiquitin-like superfamily protein |
          chr1:25556542-25558173 FORWARD LENGTH=215
          Length = 215

 Score = 62.4 bits (150), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 55/78 (70%), Gaps = 6/78 (7%)

Query: 1  MMDEPEELEPLFDYSRVQPLNNFVCLDDDEDE-DVTCAAKKRKSSKPVENEKKETNVKGV 59
          M  E E+LEPLFDY RVQP  NFVC+DDD+D+  VT   KK K+S+ V  EK + +VK +
Sbjct: 1  MGGEGEDLEPLFDYRRVQP-ANFVCIDDDDDDASVTPIPKKAKTSQTV--EKLDDDVKVI 57

Query: 60 EVVDIEDDDWLPPPPKVV 77
          EV    DDDWL PPPKV+
Sbjct: 58 EVTG--DDDWLLPPPKVI 73