Miyakogusa Predicted Gene
- Lj5g3v2179650.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2179650.1 Non Chatacterized Hit- tr|C0SV72|C0SV72_ARATH
Putative uncharacterized protein At2g33500 (Fragment)
,35,3e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; B-Box-type
zinc finger,Zinc finger, B-box; seg,NULL,CUFF.56843.1
(380 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G68190.1 | Symbols: | B-box zinc finger family protein | chr... 217 8e-57
AT5G48250.1 | Symbols: | B-box type zinc finger protein with CC... 106 3e-23
AT3G07650.4 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 103 2e-22
AT3G07650.3 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 103 2e-22
AT3G07650.2 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 103 2e-22
AT3G07650.1 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 103 2e-22
AT1G28050.1 | Symbols: | B-box type zinc finger protein with CC... 99 4e-21
AT2G33500.1 | Symbols: | B-box type zinc finger protein with CC... 98 7e-21
AT2G33500.2 | Symbols: | B-box type zinc finger protein with CC... 98 8e-21
AT3G21880.1 | Symbols: | B-box type zinc finger protein with CC... 93 4e-19
AT2G47890.1 | Symbols: | B-box type zinc finger protein with CC... 92 7e-19
AT2G47890.2 | Symbols: | B-box type zinc finger protein with CC... 90 2e-18
AT4G15250.1 | Symbols: | B-box type zinc finger protein with CC... 89 4e-18
AT5G24930.1 | Symbols: ATCOL4, COL4 | CONSTANS-like 4 | chr5:858... 78 1e-14
AT5G15850.1 | Symbols: COL1, ATCOL1 | CONSTANS-like 1 | chr5:517... 73 3e-13
AT3G02380.1 | Symbols: COL2, ATCOL2 | CONSTANS-like 2 | chr3:487... 73 4e-13
AT2G24790.1 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 | chr2:105... 72 5e-13
AT2G24790.2 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 | chr2:105... 72 9e-13
AT5G15840.1 | Symbols: CO, FG | B-box type zinc finger protein w... 71 1e-12
AT5G15840.2 | Symbols: CO, FG | B-box type zinc finger protein w... 70 3e-12
AT1G78600.1 | Symbols: LZF1, STH3, DBB3 | light-regulated zinc f... 70 3e-12
AT1G78600.2 | Symbols: LZF1 | light-regulated zinc finger protei... 69 4e-12
AT1G06040.1 | Symbols: STO | B-box zinc finger family protein | ... 65 1e-10
AT2G31380.1 | Symbols: STH | salt tolerance homologue | chr2:133... 64 2e-10
AT1G06040.2 | Symbols: STO | B-box zinc finger family protein | ... 63 4e-10
AT1G75540.1 | Symbols: STH2 | salt tolerance homolog2 | chr1:283... 62 8e-10
AT5G57660.1 | Symbols: ATCOL5, COL5 | CONSTANS-like 5 | chr5:233... 61 1e-09
AT4G10240.1 | Symbols: | B-box zinc finger family protein | chr... 60 3e-09
AT2G21320.1 | Symbols: | B-box zinc finger family protein | chr... 59 5e-09
AT4G39070.1 | Symbols: | B-box zinc finger family protein | chr... 59 5e-09
AT5G54470.1 | Symbols: | B-box type zinc finger family protein ... 58 9e-09
AT4G38960.1 | Symbols: | B-box type zinc finger family protein ... 55 1e-07
AT4G15248.1 | Symbols: | B-box type zinc finger family protein ... 55 1e-07
AT4G27310.1 | Symbols: | B-box type zinc finger family protein ... 54 1e-07
AT3G21150.1 | Symbols: BBX32 | B-box 32 | chr3:7412713-7413390 R... 53 3e-07
>AT1G68190.1 | Symbols: | B-box zinc finger family protein |
chr1:25559384-25561004 FORWARD LENGTH=356
Length = 356
Score = 217 bits (553), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 124/320 (38%), Positives = 173/320 (54%), Gaps = 64/320 (20%)
Query: 1 MEKVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLVCNSCRYHLAYVRC 60
ME+VCEFC A R +VYC +D A LCL+CDAKVH AN+LSGRHLRT++C+SC+ VRC
Sbjct: 10 MERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCKNQPCVVRC 69
Query: 61 LEHKMLICRDCDQKMH-DVSLPHHRRPIRSFMGFPSARDFAALWGFELNEIENSANQDQF 119
+HKM +C C+ K H S H RR +R + G P A+DFA +WGF + + ++ + +Q
Sbjct: 70 FDHKMFLCHGCNDKFHGGGSSEHRRRDLRCYTGCPPAKDFAVMWGFRVMDDDDDVSLEQ- 128
Query: 120 ASSSSVSAHLNVVQVSGKPDIRTRGGLSSQHDKVLYCDQERRAILQQIVDLKRFQLNEES 179
+V KP ++ GG IL+QI++L++ QL EE+
Sbjct: 129 --------SFRMV----KPKVQREGGF----------------ILEQILELEKVQLREEN 160
Query: 180 GHSAKINGLREKDLSPSVYHTQKKLDDKFNQQAQNSQDLATNLLRTGSSHAEMNPXXXXX 239
G S+ L E+ PS KK +++ Q ++L + SS
Sbjct: 161 GSSS----LTERG-DPSPLELPKKPEEQLIDLPQTGKELVVDFSHLSSSST--------- 206
Query: 240 XXXXXXXXXXXXVIELPLHGELFWTSRIPL-QNNQLWSQNIQDLGICEELVCQ-DDFNIP 297
G+ FW + P +NNQLW QNIQD+G+CE+ +C DDF IP
Sbjct: 207 ------------------LGDSFWECKSPYNKNNQLWHQNIQDIGVCEDTICSDDDFQIP 248
Query: 298 DVDLTFQNFEELFGGDQDPI 317
D+DLTF+NFEE FG D +PI
Sbjct: 249 DIDLTFRNFEEQFGADPEPI 268
>AT5G48250.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr5:19561719-19563113 REVERSE LENGTH=373
Length = 373
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 68/110 (61%), Gaps = 5/110 (4%)
Query: 1 MEKVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLVCNSCRYHLAYVRC 60
M +C+FC R +VYC+SD A LCLSCD VH ANALS RH RTLVC C A VRC
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRC 60
Query: 61 LEHKMLICRDCDQKMHD----VSLPHHRR-PIRSFMGFPSARDFAALWGF 105
+ ++ +C++CD HD + HH+R I + G PS+ + +++W F
Sbjct: 61 SDERVSLCQNCDWSGHDGKNSTTTSHHKRQTINCYSGCPSSAELSSIWSF 110
>AT3G07650.4 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 70/120 (58%), Gaps = 12/120 (10%)
Query: 1 MEKVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLVCNSCRYHLAYVRC 60
M +C+FC R +VYC+SD A LCLSCD VH ANALS RH RTLVC C A VRC
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRC 60
Query: 61 LEHKMLICRDCDQKMHDVSLP------------HHRRPIRSFMGFPSARDFAALWGFELN 108
+E ++ +C++CD H+ S H R+ I + G PS+ + A++W F L+
Sbjct: 61 VEERVSLCQNCDWSGHNNSNNNNSSSSSTSPQQHKRQTISCYSGCPSSSELASIWSFCLD 120
>AT3G07650.3 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 70/120 (58%), Gaps = 12/120 (10%)
Query: 1 MEKVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLVCNSCRYHLAYVRC 60
M +C+FC R +VYC+SD A LCLSCD VH ANALS RH RTLVC C A VRC
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRC 60
Query: 61 LEHKMLICRDCDQKMHDVSLP------------HHRRPIRSFMGFPSARDFAALWGFELN 108
+E ++ +C++CD H+ S H R+ I + G PS+ + A++W F L+
Sbjct: 61 VEERVSLCQNCDWSGHNNSNNNNSSSSSTSPQQHKRQTISCYSGCPSSSELASIWSFCLD 120
>AT3G07650.2 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 70/120 (58%), Gaps = 12/120 (10%)
Query: 1 MEKVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLVCNSCRYHLAYVRC 60
M +C+FC R +VYC+SD A LCLSCD VH ANALS RH RTLVC C A VRC
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRC 60
Query: 61 LEHKMLICRDCDQKMHDVSLP------------HHRRPIRSFMGFPSARDFAALWGFELN 108
+E ++ +C++CD H+ S H R+ I + G PS+ + A++W F L+
Sbjct: 61 VEERVSLCQNCDWSGHNNSNNNNSSSSSTSPQQHKRQTISCYSGCPSSSELASIWSFCLD 120
>AT3G07650.1 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 70/120 (58%), Gaps = 12/120 (10%)
Query: 1 MEKVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLVCNSCRYHLAYVRC 60
M +C+FC R +VYC+SD A LCLSCD VH ANALS RH RTLVC C A VRC
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRC 60
Query: 61 LEHKMLICRDCDQKMHDVSLP------------HHRRPIRSFMGFPSARDFAALWGFELN 108
+E ++ +C++CD H+ S H R+ I + G PS+ + A++W F L+
Sbjct: 61 VEERVSLCQNCDWSGHNNSNNNNSSSSSTSPQQHKRQTISCYSGCPSSSELASIWSFCLD 120
>AT1G28050.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:9775768-9777657 REVERSE LENGTH=433
Length = 433
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Query: 5 CEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLVCNSCRYHLAYVRCLEHK 64
C+FC +++C++D A LCL CD +VH AN LS +H+R+ +C++C VRC
Sbjct: 9 CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTDN 68
Query: 65 MLICRDCDQKMH---DVSLPHHRRPIRSFMGFPSARDFAALWGFELNE 109
+++C++CD +H VS H R + F G PSA + AALWG +L +
Sbjct: 69 LILCQECDWDVHGSCSVSDAHVRSAVEGFSGCPSALELAALWGLDLEQ 116
>AT2G33500.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr2:14188159-14190046 REVERSE LENGTH=402
Length = 402
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
Query: 4 VCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLVCNSCRYHLAYVRCLEH 63
CEFC +++C++D A LCL CD VH AN LS +H+R+ +C++C VRC
Sbjct: 11 ACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCFTD 70
Query: 64 KMLICRDCDQKMH---DVSLPHHRRPIRSFMGFPSARDFAALWGFELNEIENSANQDQFA 120
+++C++CD +H S H R + F G PS + AA+WG +L + ++D+
Sbjct: 71 NLVLCQECDWDVHGSCSSSATHERSAVEGFSGCPSVLELAAVWGIDLKGKKKEDDEDELT 130
>AT2G33500.2 | Symbols: | B-box type zinc finger protein with CCT
domain | chr2:14188159-14190046 REVERSE LENGTH=401
Length = 401
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
Query: 4 VCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLVCNSCRYHLAYVRCLEH 63
CEFC +++C++D A LCL CD VH AN LS +H+R+ +C++C VRC
Sbjct: 11 ACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCFTD 70
Query: 64 KMLICRDCDQKMH---DVSLPHHRRPIRSFMGFPSARDFAALWGFELNEIENSANQDQFA 120
+++C++CD +H S H R + F G PS + AA+WG +L + ++D+
Sbjct: 71 NLVLCQECDWDVHGSCSSSATHERSAVEGFSGCPSVLELAAVWGIDLKGKKKEDDEDELT 130
>AT3G21880.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr3:7706748-7708093 FORWARD LENGTH=364
Length = 364
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Query: 1 MEKVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLVCNSCRYHLAYVRC 60
ME C+ C+ + L+YCKSD A LCL+CD VH AN LS RH+R+L+C C A +RC
Sbjct: 1 MEPKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLICEKCFSQPAAIRC 60
Query: 61 LEHKMLICRDCDQKMHDVS-LPHHRRPIRSFMGFPSARDFAALW 103
L+ K+ C+ C + S L H + + F G PS DF +W
Sbjct: 61 LDEKVSYCQGCHWHESNCSELGHRVQSLNPFSGCPSPTDFNRMW 104
>AT2G47890.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr2:19608245-19609476 FORWARD LENGTH=332
Length = 332
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Query: 2 EKVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLVCNSCRYHLAYVRCL 61
+++C++C + LVYCK+D A LCL+CD +VH+AN L +H R+L+C+SC + + C
Sbjct: 10 DRLCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCE 69
Query: 62 EHKMLICRDCDQKMHDVSLP-HHRRPIRSFMGFPSARDFAALWGFE 106
+ ++C++CD + H S H RRP F G PS + A+ G +
Sbjct: 70 TERSVLCQNCDWQHHTASSSLHSRRPFEGFTGCPSVPELLAIVGLD 115
>AT2G47890.2 | Symbols: | B-box type zinc finger protein with CCT
domain | chr2:19608245-19609036 FORWARD LENGTH=237
Length = 237
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Query: 2 EKVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLVCNSCRYHLAYVRCL 61
+++C++C + LVYCK+D A LCL+CD +VH+AN L +H R+L+C+SC + + C
Sbjct: 10 DRLCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCE 69
Query: 62 EHKMLICRDCDQKMHDVSLP-HHRRPIRSFMGFPSARDFAALWGFE 106
+ ++C++CD + H S H RRP F G PS + A+ G +
Sbjct: 70 TERSVLCQNCDWQHHTASSSLHSRRPFEGFTGCPSVPELLAIVGLD 115
>AT4G15250.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr4:8709942-8711106 REVERSE LENGTH=330
Length = 330
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 1 MEKVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLVCNSCRYHLAYVRC 60
ME C+FC + L+YCKSD A LCL+CD VH AN LS RH R+L+C C V C
Sbjct: 1 MEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQPTAVHC 60
Query: 61 LEHKMLICRDCDQKMHDVS-LPHHRRPIRSFMGFPSARDFAALWGFEL 107
+ + +C+ C + + L H + + + PS DF +W L
Sbjct: 61 MNENVSLCQGCQWTASNCTGLGHRLQSLNPYSDCPSPSDFGKIWSSTL 108
>AT5G24930.1 | Symbols: ATCOL4, COL4 | CONSTANS-like 4 |
chr5:8589325-8590949 FORWARD LENGTH=406
Length = 406
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 3 KVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLVCNSCRYHLAYVRCLE 62
K+C+ C + +YC+ D A+LCLSCD+KVH AN L+ RH R +C C A+V C
Sbjct: 48 KLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKA 107
Query: 63 HKMLICRDCDQKMHD---VSLPHHRRPIRSF 90
+C CD+ +H ++ H R P+ F
Sbjct: 108 DAAALCVTCDRDIHSANPLARRHERVPVTPF 138
>AT5G15850.1 | Symbols: COL1, ATCOL1 | CONSTANS-like 1 |
chr5:5176297-5177473 REVERSE LENGTH=355
Length = 355
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 3 KVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLVCNSCRYHLAYVRCLE 62
+ C+ C + VYC++D AYLC SCDA+VH AN L+ RH R VC SC A C
Sbjct: 10 QACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCKA 69
Query: 63 HKMLICRDCDQKMHD---VSLPHHRRPI 87
+C CD ++H ++ H R PI
Sbjct: 70 DAASLCTTCDSEIHSANPLARRHQRVPI 97
>AT3G02380.1 | Symbols: COL2, ATCOL2 | CONSTANS-like 2 |
chr3:487438-488624 REVERSE LENGTH=347
Length = 347
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 3 KVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLVCNSCRYHLAYVRCLE 62
+ C+ C + VYC++D AYLC +CDA+VH AN ++ RH R VC SC A C
Sbjct: 14 RACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCKA 73
Query: 63 HKMLICRDCDQKMHD---VSLPHHRRPI 87
+C CD ++H ++ H R PI
Sbjct: 74 DAASLCTACDAEIHSANPLARRHQRVPI 101
>AT2G24790.1 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 |
chr2:10566959-10567946 FORWARD LENGTH=294
Length = 294
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 3 KVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLVCNSCRYHLAYVRCLE 62
++C+ C + ++C++D A+LC CD K+H AN L+ RH R +C C A+V C
Sbjct: 6 RLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTCKA 65
Query: 63 HKMLICRDCDQKMHD---VSLPHHRRPIRSF 90
+C CD+ +H +S H R PI F
Sbjct: 66 DAAALCVTCDRDIHSANPLSRRHERVPITPF 96
>AT2G24790.2 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 |
chr2:10566959-10567621 FORWARD LENGTH=220
Length = 220
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 3 KVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLVCNSCRYHLAYVRCLE 62
++C+ C + ++C++D A+LC CD K+H AN L+ RH R +C C A+V C
Sbjct: 6 RLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTCKA 65
Query: 63 HKMLICRDCDQKMHD---VSLPHHRRPIRSF 90
+C CD+ +H +S H R PI F
Sbjct: 66 DAAALCVTCDRDIHSANPLSRRHERVPITPF 96
>AT5G15840.1 | Symbols: CO, FG | B-box type zinc finger protein with
CCT domain | chr5:5171343-5172697 REVERSE LENGTH=373
Length = 373
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 3 KVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLVCNSCRYHLAYVRCLE 62
+ C+ C + VYC +D AYLC+SCDA+VH AN ++ RH R VC SC A C
Sbjct: 18 RPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLCEA 77
Query: 63 HKMLICRDCDQKMHD---VSLPHHRRPIRSFMG 92
+C CD ++H ++ H R PI G
Sbjct: 78 DDASLCTACDSEVHSANPLARRHQRVPILPISG 110
>AT5G15840.2 | Symbols: CO, FG | B-box type zinc finger protein with
CCT domain | chr5:5171873-5172697 REVERSE LENGTH=274
Length = 274
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 3 KVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLVCNSCRYHLAYVRCLE 62
+ C+ C + VYC +D AYLC+SCDA+VH AN ++ RH R VC SC A C
Sbjct: 18 RPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLCEA 77
Query: 63 HKMLICRDCDQKMHD---VSLPHHRRPIRSFMG 92
+C CD ++H ++ H R PI G
Sbjct: 78 DDASLCTACDSEVHSANPLARRHQRVPILPISG 110
>AT1G78600.1 | Symbols: LZF1, STH3, DBB3 | light-regulated zinc
finger protein 1 | chr1:29567370-29568662 FORWARD
LENGTH=299
Length = 299
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 13/97 (13%)
Query: 1 MEKVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLV---------CNSC 51
M+ C C A V C +DEA LC +CD K+H AN L+G+H R + C+ C
Sbjct: 1 MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60
Query: 52 RYHLAYVRCLEHKMLICRDCDQKMHDVSLPH---HRR 85
+ + CL+ + L+CR CD +H V+ PH H+R
Sbjct: 61 QEASGFFFCLQDRALLCRKCDVAIHTVN-PHVSAHQR 96
>AT1G78600.2 | Symbols: LZF1 | light-regulated zinc finger protein
1 | chr1:29567370-29568662 FORWARD LENGTH=319
Length = 319
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 13/97 (13%)
Query: 1 MEKVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLV---------CNSC 51
M+ C C A V C +DEA LC +CD K+H AN L+G+H R + C+ C
Sbjct: 1 MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60
Query: 52 RYHLAYVRCLEHKMLICRDCDQKMHDVSLPH---HRR 85
+ + CL+ + L+CR CD +H V+ PH H+R
Sbjct: 61 QEASGFFFCLQDRALLCRKCDVAIHTVN-PHVSAHQR 96
>AT1G06040.1 | Symbols: STO | B-box zinc finger family protein |
chr1:1828662-1829659 REVERSE LENGTH=248
Length = 248
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 1 MEKVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLV---------CNSC 51
M+ C+ C V C +DEA LC CD ++H AN L+ +H R + C+ C
Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60
Query: 52 RYHLAYVRCLEHKMLICRDCDQKMH 76
+ A++ C+E + L+CRDCD+ +H
Sbjct: 61 QEKAAFIFCVEDRALLCRDCDESIH 85
>AT2G31380.1 | Symbols: STH | salt tolerance homologue |
chr2:13382150-13383302 FORWARD LENGTH=238
Length = 238
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 1 MEKVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLV---------CNSC 51
M+ C+ C + C +DEA LC CD +VH AN L+ +H R + C+ C
Sbjct: 1 MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDIC 60
Query: 52 RYHLAYVRCLEHKMLICRDCDQKMH 76
A++ C+E + L+CRDCD+ H
Sbjct: 61 LEKAAFIFCVEDRALLCRDCDEATH 85
>AT1G06040.2 | Symbols: STO | B-box zinc finger family protein |
chr1:1828957-1829659 REVERSE LENGTH=177
Length = 177
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 1 MEKVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLV---------CNSC 51
M+ C+ C V C +DEA LC CD ++H AN L+ +H R + C+ C
Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60
Query: 52 RYHLAYVRCLEHKMLICRDCDQKMH 76
+ A++ C+E + L+CRDCD+ +H
Sbjct: 61 QEKAAFIFCVEDRALLCRDCDESIH 85
>AT1G75540.1 | Symbols: STH2 | salt tolerance homolog2 |
chr1:28366059-28367398 FORWARD LENGTH=331
Length = 331
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
Query: 1 MEKVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLR------------TLVC 48
M+ C+ C V+C +DEA LC CD +VH AN L+ +HLR + +C
Sbjct: 1 MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60
Query: 49 NSCRYHLAYVRCLEHKMLICRDCDQKMH 76
+ C+ A + C + + ++C+DCD +H
Sbjct: 61 DICQDKKALLFCQQDRAILCKDCDSSIH 88
>AT5G57660.1 | Symbols: ATCOL5, COL5 | CONSTANS-like 5 |
chr5:23355573-23356729 FORWARD LENGTH=355
Length = 355
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 3 KVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLVCNSCRYHLAYVRCLE 62
+ C+ C ++ V+C+ D A+LC++CD ++H RH R VC C A V C
Sbjct: 20 RSCDACKSVTAAVFCRVDSAFLCIACDTRIHSFT----RHERVWVCEVCEQAPAAVTCKA 75
Query: 63 HKMLICRDCDQKMHD---VSLPHHRRPIRSFM 91
+C CD +H ++ H R P+ +F
Sbjct: 76 DAAALCVSCDADIHSANPLASRHERVPVETFF 107
>AT4G10240.1 | Symbols: | B-box zinc finger family protein |
chr4:6368967-6369526 REVERSE LENGTH=162
Length = 162
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 43/91 (47%), Gaps = 15/91 (16%)
Query: 1 MEKVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTL-------------- 46
M+ CE C V C SDEA LC CD KVH AN L RH R
Sbjct: 1 MKIQCEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKLFQRHHRVALQKDAASATTASGA 60
Query: 47 -VCNSCRYHLAYVRCLEHKMLICRDCDQKMH 76
+C+ C+ Y CLE + ++C DCD+ +H
Sbjct: 61 PLCDICQERKGYFFCLEDRAMLCNDCDEAIH 91
>AT2G21320.1 | Symbols: | B-box zinc finger family protein |
chr2:9126502-9127652 FORWARD LENGTH=172
Length = 172
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 10/105 (9%)
Query: 1 MEKVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLV--------CNSCR 52
M +C+ C + +V+C +DEA LC SCD KVH N L+ RHLR + C+ C
Sbjct: 1 MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICE 60
Query: 53 YHLAYVRCLEHKMLICRDCDQKMHDVSLPHHRR--PIRSFMGFPS 95
A+ C +C CD +H HRR +R + FP
Sbjct: 61 NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHRRFLLLRQRIEFPG 105
>AT4G39070.1 | Symbols: | B-box zinc finger family protein |
chr4:18205061-18206421 REVERSE LENGTH=242
Length = 242
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 1 MEKVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLR----------TLVCNS 50
M+ C C V+C +DEA LC CD VH AN L+G+HLR +C+
Sbjct: 1 MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60
Query: 51 CRYHLAYVRCLEHKMLICRDCDQKMH 76
C A + C E + ++CR+CD +H
Sbjct: 61 CGERRALLFCQEDRAILCRECDIPIH 86
>AT5G54470.1 | Symbols: | B-box type zinc finger family protein |
chr5:22114584-22115315 REVERSE LENGTH=215
Length = 215
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 2 EKVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLVCNSCRYHLAY 57
+K CE C + + YC+SD+A LC CD KVH AN L +H+R L+C++C+ H +
Sbjct: 3 KKKCELCCGVARM-YCESDQASLCWDCDGKVHGANFLVAKHMRCLLCSACQSHTPW 57
>AT4G38960.1 | Symbols: | B-box type zinc finger family protein |
chr4:18161576-18163045 FORWARD LENGTH=183
Length = 183
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
Query: 1 MEKVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLV--------CNSCR 52
M +C+ C +++C +DEA LC CD KVH+ N L+ RH+R + C+ C
Sbjct: 1 MRILCDACENAAAIIFCAADEAALCRPCDEKVHMCNKLASRHVRVGLAEPSNAPCCDICE 60
Query: 53 YHLAYVRCLEHKMLICRDCDQKMHDVSLPHHRR--PIRSFMGFPS 95
A+ C +C CD +H H R +R + FP
Sbjct: 61 NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHGRFLLLRQRIEFPG 105
>AT4G15248.1 | Symbols: | B-box type zinc finger family protein |
chr4:8708881-8709234 FORWARD LENGTH=117
Length = 117
Score = 54.7 bits (130), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 5 CEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLVCNSCR 52
CE C VYC++D A+LC CD VH AN L+ RHLR ++C +CR
Sbjct: 32 CELCGE-NATVYCEADAAFLCRKCDRWVHSANFLARRHLRRVICTTCR 78
>AT4G27310.1 | Symbols: | B-box type zinc finger family protein |
chr4:13675853-13676616 FORWARD LENGTH=223
Length = 223
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 1 MEKVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLVCNSCR 52
M K C+ C+ + + YC+SD+A LC CD KVH AN L +H R L+C++C+
Sbjct: 1 MGKKCDLCNGVARM-YCESDQASLCWDCDGKVHGANFLVAKHTRCLLCSACQ 51
>AT3G21150.1 | Symbols: BBX32 | B-box 32 | chr3:7412713-7413390
REVERSE LENGTH=225
Length = 225
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 1 MEKVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLVCNSCR 52
M CE C A L +C +D A+LC SCDAK H +N L RH R ++C +C+
Sbjct: 1 MVSFCELCGAEADL-HCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNCK 51