Miyakogusa Predicted Gene

Lj5g3v2169560.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2169560.2 Non Chatacterized Hit- tr|B9SJY8|B9SJY8_RICCO
ATP-dependent RNA helicase, putative OS=Ricinus
commun,72.74,0,SUBFAMILY NOT NAMED,NULL; ATP-DEPENDENT RNA
HELICASE,NULL; no description,NULL; seg,NULL; P-loop con,CUFF.56833.2
         (691 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G01130.1 | Symbols:  | DEA(D/H)-box RNA helicase family prote...   808   0.0  
AT1G48650.1 | Symbols:  | DEA(D/H)-box RNA helicase family prote...   747   0.0  
AT1G48650.2 | Symbols:  | DEA(D/H)-box RNA helicase family prote...   747   0.0  
AT5G04895.1 | Symbols:  | DEA(D/H)-box RNA helicase family prote...   711   0.0  
AT2G35920.1 | Symbols:  | RNA helicase family protein | chr2:150...   457   e-128
AT1G58060.1 | Symbols:  | RNA helicase family protein | chr1:214...   324   1e-88
AT1G58050.1 | Symbols:  | RNA helicase family protein | chr1:214...   290   2e-78
AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissu...   233   3e-61
AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase | chr1:204...   232   8e-61
AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein | c...   213   5e-55
AT4G18465.1 | Symbols:  | RNA helicase family protein | chr4:101...   194   3e-49
AT2G47250.1 | Symbols:  | RNA helicase family protein | chr2:193...   177   3e-44
AT3G62310.1 | Symbols:  | RNA helicase family protein | chr3:230...   175   8e-44
AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein | chr1...   169   5e-42
AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family prote...   169   5e-42
AT3G26560.1 | Symbols:  | ATP-dependent RNA helicase, putative |...   167   2e-41
AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protei...   166   4e-41
AT4G16680.1 | Symbols:  | P-loop containing nucleoside triphosph...   164   2e-40
AT1G27900.1 | Symbols:  | RNA helicase family protein | chr1:971...   164   3e-40
AT5G10370.1 | Symbols:  | helicase domain-containing protein / I...   156   4e-38
AT4G01020.1 | Symbols:  | helicase domain-containing protein / I...   150   3e-36
AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protei...   129   5e-30
AT1G26370.1 | Symbols:  | RNA helicase family protein | chr1:912...   122   7e-28
AT2G47680.1 | Symbols:  | zinc finger (CCCH type) helicase famil...   106   7e-23

>AT2G01130.1 | Symbols:  | DEA(D/H)-box RNA helicase family protein
           | chr2:88847-94635 REVERSE LENGTH=1113
          Length = 1113

 Score =  808 bits (2088), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/668 (61%), Positives = 489/668 (73%), Gaps = 48/668 (7%)

Query: 22  MKDRPYGAVYVPPHHRLRSVVTSANHHSAAAAPVSPKLTQNPTPLKTPFLEQAPNNTNSR 81
           M +R   ++YVPPH RL S                     NP PL +P           R
Sbjct: 1   MTNRLPPSLYVPPHQRLGS-----------------DYGFNPVPL-SPV----------R 32

Query: 82  FVSAYDDVVSDDCFDREFQIPLPSSLPSDFPNDNIAEWKRKLSMLLNDKSKQEVISREKK 141
           +VSAYDD VS+D   +E            F   ++ +W ++ SMLL D  KQEVISREKK
Sbjct: 33  YVSAYDDRVSEDRQPQE----------GTFHCADLDDWNKRFSMLLKDSLKQEVISREKK 82

Query: 142 DRHDFEQIAVLATEMGLYSHKYTKVVVFSKVPXXXXXXXXXXXXXXXEVSMPITLFRQVD 201
           DR DF+++A LAT +GLYSH Y KVVVFSK+P               EV++   L ++V+
Sbjct: 83  DRRDFDKLAALATTLGLYSHAYAKVVVFSKIPLPNYRFDLDDKKPQREVNLHTDLLQRVE 142

Query: 202 AHFEEYLRQKSRVNKXXXXXXXXXXXXXXXVGTDEGLFEQPVLLASSKAVAEKVLLRRSL 261
           A+  EYL + S  N+                 TDE   EQP+ ++     A K+L +RSL
Sbjct: 143 AYLTEYLSKSS--NRIDRVPANSVSRTSSISSTDEWFSEQPLPIS-----ATKILWQRSL 195

Query: 262 QMRNQQHAWQESPEGRRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQ 321
           Q+R++Q  WQ S EG+R+L+ R+SLPA+K++ ++L+ +S+NQV++ISGETGCGKTTQIPQ
Sbjct: 196 QLRDRQQYWQASVEGQRMLDSRTSLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQ 255

Query: 322 FILESEIEAVRGAACNIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDT 381
           FILESEIEA RGA  +IICTQPRRISAMSVSERVA ERGE+LGESVGYKVRLEGVKGRDT
Sbjct: 256 FILESEIEANRGAFSSIICTQPRRISAMSVSERVAYERGEQLGESVGYKVRLEGVKGRDT 315

Query: 382 HILFCTTGILLRRLLADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILM 441
            +LFCTTGILLRRLL DRNL GVTHVIVDEIHERGMNEDF           R ELKLILM
Sbjct: 316 RLLFCTTGILLRRLLVDRNLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRSELKLILM 375

Query: 442 SATLDAELFSSYFNGAPIMNIPGFTYPVRTYFLENILEMTGYRLTPYNQIDDYGQERMWK 501
           SATLDAELFSSYF GA ++ IPGFTYPVR++FLE+ILEMT YRLTPYNQIDDYGQER WK
Sbjct: 376 SATLDAELFSSYFGGAGVIYIPGFTYPVRSHFLEDILEMTRYRLTPYNQIDDYGQERTWK 435

Query: 502 MNKQAPRKRKSQIASTVEDAIRAADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICEN 561
           MNKQ P+KRKSQI   VEDA+RAADFK++SP+T+ESLSCW PDCIGF+LIE++LCNICEN
Sbjct: 436 MNKQIPKKRKSQITFVVEDALRAADFKEFSPETRESLSCWYPDCIGFNLIEFLLCNICEN 495

Query: 562 ERPGAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPEDGV 621
           E PG +L+F+TGWDDISSLKEKL  + + G+P+ V+LLACHGSM + EQRLIFEEP  GV
Sbjct: 496 EGPGGILIFLTGWDDISSLKEKLQIHPIFGNPDLVMLLACHGSMETFEQRLIFEEPASGV 555

Query: 622 RKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRKSWSR 681
           RKIVLATNIAETSITINDV FV+DCGKAKETSYDALNNTPCLLP+WISKVSAQQR+    
Sbjct: 556 RKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRG--- 612

Query: 682 STGRVLPS 689
             GRV P 
Sbjct: 613 RAGRVRPG 620


>AT1G48650.1 | Symbols:  | DEA(D/H)-box RNA helicase family protein
           | chr1:17989670-17995169 REVERSE LENGTH=1197
          Length = 1197

 Score =  747 bits (1929), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/587 (61%), Positives = 450/587 (76%), Gaps = 7/587 (1%)

Query: 85  AYDDVVSDDCFDREFQIPLPSSLPSDFPNDNIAEWKRKLSMLLNDKSKQEVISREKKDRH 144
           AY+D  S D  DR+        +      DNI +W+ KL+MLL +K  QEV+SRE+KDR 
Sbjct: 104 AYNDYESSDESDRDVGSSQSQQMAGS-TLDNIDQWRFKLTMLLRNKEDQEVVSRERKDRR 162

Query: 145 DFEQIAVLATEMGLYSHKYTKVVVFSKVPXXXXXXXXXXXXXXXEVSMPITLFRQVDAHF 204
           DF+ I+ LAT MGL+S +Y+K+VV SK P               EV +P  L  +VDAH 
Sbjct: 163 DFDHISALATRMGLHSRQYSKIVVISKAPLPNYRPDLDDKRPQREVVLPFGLQSEVDAHL 222

Query: 205 EEYLRQKSRVNKXXXXXXXXXXXXXXXVGTDEGLFEQPVLLASSKAVAEKVLLRRSLQMR 264
             +L QK  +                 +    G +E P  +  +    E++L  RSLQ++
Sbjct: 223 HSFLDQKKTL-----IPEMPRQNSSESLANGYGNYETPETVMQNSLARERILRPRSLQLK 277

Query: 265 NQQHAWQESPEGRRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFIL 324
           ++Q  W +SPEG++++ FR +LPAYKEK+A+L  ++ NQVV++SGETGCGKTTQ+PQ+IL
Sbjct: 278 SKQQQWVDSPEGQKMVGFRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYIL 337

Query: 325 ESEIEAVRGAACNIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHIL 384
           ESEIEA RGA C+IICTQPRRISA+SVSERVA+ERGE++GESVGYKVRLEG++GRDT +L
Sbjct: 338 ESEIEAARGATCSIICTQPRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLL 397

Query: 385 FCTTGILLRRLLADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSAT 444
           FCTTG+LLRRLL DR+L+GVTHV+VDEIHERGMNEDF           RP+LKLILMSAT
Sbjct: 398 FCTTGVLLRRLLVDRSLKGVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSAT 457

Query: 445 LDAELFSSYFNGAPIMNIPGFTYPVRTYFLENILEMTGYRLTPYNQIDDYGQERMWKMNK 504
           L+AELFSSYF GAP M+IPGFTYPVR +FLE+ LE +GYRLT YNQIDDYG+E+ WKM K
Sbjct: 458 LNAELFSSYFGGAPAMHIPGFTYPVRAHFLEDYLETSGYRLTTYNQIDDYGEEKTWKMQK 517

Query: 505 QAP-RKRKSQIASTVEDAIRAADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICENER 563
           QA  +KRKS I+S VEDA+ AADFK Y+ +T++SLSCW+PD IGF+LIE +LC+I + ER
Sbjct: 518 QAQFKKRKSLISSAVEDALEAADFKGYNFRTRDSLSCWSPDSIGFNLIENVLCHIVKGER 577

Query: 564 PGAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPEDGVRK 623
           PGAVLVFMTGWDDI+SLK +L  +++LGDPN+VLLLACHGSMASSEQRLIF+ P +G+RK
Sbjct: 578 PGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGIRK 637

Query: 624 IVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISK 670
           IVLATN+AETSITINDVV+V+DCGKAKETSYDALNNTPCLLP+WISK
Sbjct: 638 IVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISK 684


>AT1G48650.2 | Symbols:  | DEA(D/H)-box RNA helicase family protein
           | chr1:17989517-17995169 REVERSE LENGTH=1206
          Length = 1206

 Score =  747 bits (1929), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/587 (61%), Positives = 450/587 (76%), Gaps = 7/587 (1%)

Query: 85  AYDDVVSDDCFDREFQIPLPSSLPSDFPNDNIAEWKRKLSMLLNDKSKQEVISREKKDRH 144
           AY+D  S D  DR+        +      DNI +W+ KL+MLL +K  QEV+SRE+KDR 
Sbjct: 104 AYNDYESSDESDRDVGSSQSQQMAGS-TLDNIDQWRFKLTMLLRNKEDQEVVSRERKDRR 162

Query: 145 DFEQIAVLATEMGLYSHKYTKVVVFSKVPXXXXXXXXXXXXXXXEVSMPITLFRQVDAHF 204
           DF+ I+ LAT MGL+S +Y+K+VV SK P               EV +P  L  +VDAH 
Sbjct: 163 DFDHISALATRMGLHSRQYSKIVVISKAPLPNYRPDLDDKRPQREVVLPFGLQSEVDAHL 222

Query: 205 EEYLRQKSRVNKXXXXXXXXXXXXXXXVGTDEGLFEQPVLLASSKAVAEKVLLRRSLQMR 264
             +L QK  +                 +    G +E P  +  +    E++L  RSLQ++
Sbjct: 223 HSFLDQKKTL-----IPEMPRQNSSESLANGYGNYETPETVMQNSLARERILRPRSLQLK 277

Query: 265 NQQHAWQESPEGRRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFIL 324
           ++Q  W +SPEG++++ FR +LPAYKEK+A+L  ++ NQVV++SGETGCGKTTQ+PQ+IL
Sbjct: 278 SKQQQWVDSPEGQKMVGFRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYIL 337

Query: 325 ESEIEAVRGAACNIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHIL 384
           ESEIEA RGA C+IICTQPRRISA+SVSERVA+ERGE++GESVGYKVRLEG++GRDT +L
Sbjct: 338 ESEIEAARGATCSIICTQPRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLL 397

Query: 385 FCTTGILLRRLLADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSAT 444
           FCTTG+LLRRLL DR+L+GVTHV+VDEIHERGMNEDF           RP+LKLILMSAT
Sbjct: 398 FCTTGVLLRRLLVDRSLKGVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSAT 457

Query: 445 LDAELFSSYFNGAPIMNIPGFTYPVRTYFLENILEMTGYRLTPYNQIDDYGQERMWKMNK 504
           L+AELFSSYF GAP M+IPGFTYPVR +FLE+ LE +GYRLT YNQIDDYG+E+ WKM K
Sbjct: 458 LNAELFSSYFGGAPAMHIPGFTYPVRAHFLEDYLETSGYRLTTYNQIDDYGEEKTWKMQK 517

Query: 505 QAP-RKRKSQIASTVEDAIRAADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICENER 563
           QA  +KRKS I+S VEDA+ AADFK Y+ +T++SLSCW+PD IGF+LIE +LC+I + ER
Sbjct: 518 QAQFKKRKSLISSAVEDALEAADFKGYNFRTRDSLSCWSPDSIGFNLIENVLCHIVKGER 577

Query: 564 PGAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPEDGVRK 623
           PGAVLVFMTGWDDI+SLK +L  +++LGDPN+VLLLACHGSMASSEQRLIF+ P +G+RK
Sbjct: 578 PGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGIRK 637

Query: 624 IVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISK 670
           IVLATN+AETSITINDVV+V+DCGKAKETSYDALNNTPCLLP+WISK
Sbjct: 638 IVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISK 684


>AT5G04895.1 | Symbols:  | DEA(D/H)-box RNA helicase family protein
           | chr5:1428796-1434516 FORWARD LENGTH=1161
          Length = 1161

 Score =  711 bits (1836), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/594 (58%), Positives = 447/594 (75%), Gaps = 12/594 (2%)

Query: 81  RFVSAYDDVVSDDCFDREFQIPLPSSLPSDFPNDNIAEWKRKLSMLLNDKSKQEVISREK 140
           RF+    +  SDD ++ EF+    SS  +     N+ EWK KL +LL + S+QE++SR+K
Sbjct: 64  RFIGHTAEQFSDDEYECEFEEHKASSSVA-----NVDEWKWKLGILLANDSEQEIVSRDK 118

Query: 141 KDRHDFEQIAVLATEMGLYSHKYTKVVVFSKVPXXXXXXXXXXXXXXXEVSMPITLFRQV 200
           +DR D+EQI+ LA  MGLYS  Y KVVV SKVP               EV +P++L R+V
Sbjct: 119 RDRRDYEQISNLAKRMGLYSEIYGKVVVASKVPLPNYRPDLDDKRPQREVVLPLSLQRRV 178

Query: 201 DAHFEEYL-RQKSRVNKXXXXXXXXXXXXXXXVGTDEGLFEQPVLLASSKAVAEKVLLRR 259
           +   +E+L  Q+    K                  DE        L  S  V EKVL RR
Sbjct: 179 EGLLQEHLDSQQLSSGKANECVADSQPPKQTEELPDEN---SDSFLDGS--VMEKVLQRR 233

Query: 260 SLQMRNQQHAWQESPEGRRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQI 319
           S++MRN Q  WQESPEGR +LEFR +LP++K+KE +L  ++RNQV+++SGETGCGKTTQ+
Sbjct: 234 SMRMRNMQRTWQESPEGRTMLEFRKTLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQL 293

Query: 320 PQFILESEIEAVRGAACNIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGR 379
           PQ+ILESEIE+ RGA CNIICTQPRRISAM+VSERV++ERGE LGE+VG+KVRLEG++G+
Sbjct: 294 PQYILESEIESGRGAFCNIICTQPRRISAMAVSERVSAERGEPLGETVGFKVRLEGMRGK 353

Query: 380 DTHILFCTTGILLRRLLADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLI 439
           +TH+LFCT+GILLRRLL+DRNL GVTHV VDEIHERGMNEDF           RP+L+L+
Sbjct: 354 NTHLLFCTSGILLRRLLSDRNLNGVTHVFVDEIHERGMNEDFLIIVLKELLPRRPDLRLV 413

Query: 440 LMSATLDAELFSSYFNGAPIMNIPGFTYPVRTYFLENILEMTGYRLTPYNQIDDYGQERM 499
           LMSATL+AELFS+Y+ GAP ++IPGFT+PV+ +FLE++LE+TGY+LT +NQ+DDYGQE+ 
Sbjct: 414 LMSATLNAELFSNYYGGAPTIHIPGFTHPVKAHFLEDVLEITGYKLTSFNQVDDYGQEKT 473

Query: 500 WKMNKQ-APRKRKSQIASTVEDAIRAADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNI 558
           WK  KQ  PRKRK+QI + VE+A+  ++F+ Y+ +T++SLS W PDCIGF+LIE +LC+I
Sbjct: 474 WKTQKQLMPRKRKNQITTLVEEALSKSNFESYNSRTRDSLSSWMPDCIGFNLIEAVLCHI 533

Query: 559 CENERPGAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPE 618
           C  ERPGAVLVF+TGWDDI SL +++  + +LGDPNRVLLL CHGSMA++EQRLIFE   
Sbjct: 534 CRKERPGAVLVFLTGWDDIRSLSDQIKAHPLLGDPNRVLLLMCHGSMATAEQRLIFERAP 593

Query: 619 DGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVS 672
             +RKIVLATN+AE SITINDVVFV+DCGKAKET+YDALNNTPCLLP+WIS+ S
Sbjct: 594 PNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLPSWISQAS 647


>AT2G35920.1 | Symbols:  | RNA helicase family protein |
           chr2:15075674-15080506 FORWARD LENGTH=995
          Length = 995

 Score =  457 bits (1175), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 249/573 (43%), Positives = 344/573 (60%), Gaps = 20/573 (3%)

Query: 118 EWKRKLSMLLNDKSKQEVISREKKDRHDFEQIAVLATEMGLYSHKYTK--VVVFSKV--P 173
           EW  K+        +QE++ +    R D + ++ +A +MGLY H Y K   +V SKV  P
Sbjct: 66  EWWNKIEQW-KTGGEQEMLIKRNFSRGDQQTLSDMALQMGLYFHAYNKGKALVVSKVPLP 124

Query: 174 XXXXXXXXXXXXXXXEVSMPITLFRQVDAHFEEYLRQKSRVNKXXXXXXXXXXXXXXXVG 233
                          E+ M     R++ +  +      S                   + 
Sbjct: 125 DYRADLDERHGSTQKEIKMSTETERKLGSLLKTTQESGSSGASASAFNDQQDRTSTLGLK 184

Query: 234 TDEGLFEQPVLLASSKAVAEKVLLRRSLQMRNQQHAWQESPEGRRILEFRSSLPAYKEKE 293
             +   + P  L   K          S  ++ +Q   + +   + +  FR  LPA+K KE
Sbjct: 185 RPDSASKLPDSLEKEKF---------SFALKERQEKLKATESVKALKAFREKLPAFKMKE 235

Query: 294 AILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNIICTQPRRISAMSVSE 353
             L+ +S+NQV+++SGETGCGKTTQ+PQFILE EI ++RGA CNIICTQPRRISA+SV+ 
Sbjct: 236 EFLNSVSQNQVLVVSGETGCGKTTQLPQFILEEEISSLRGADCNIICTQPRRISAISVAS 295

Query: 354 RVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLADRNLEGVTHVIVDEIH 413
           R+++ERGE +GESVGY++RLE  +   T +LFCTTG+LLRRL+ D NL  V+H++VDEIH
Sbjct: 296 RISAERGESIGESVGYQIRLESKRSDQTRLLFCTTGVLLRRLIEDPNLTNVSHLLVDEIH 355

Query: 414 ERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFNGAPIMNIPGFTYPVRTYF 473
           ERGMNEDF           RP+L+LILMSAT++A++FS+YF  +P M+IPGFT+PV   F
Sbjct: 356 ERGMNEDFLLIILRDLLPRRPDLRLILMSATINADMFSTYFGNSPTMHIPGFTFPVAELF 415

Query: 474 LENILEMTGYRLTPYNQIDDYGQERMWKMNKQAPRKRKSQIASTVEDAIRAADFKDYSPQ 533
           LE++LE + Y +   +  +  G  R  +   ++   +K  + +  ED    + +K YS  
Sbjct: 416 LEDVLEKSRYNIKSSDSGNYQGSSRGRRRESES---KKDDLTTLFEDIDINSHYKSYSSA 472

Query: 534 TQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKLLRNNVLGDP 593
           T+ SL  W+   I   L+E  + +IC  E  GA+LVF+TGWD+IS L EK+  NN LGD 
Sbjct: 473 TRNSLEAWSGAQIDVDLVEATIEHICRLEGGGAILVFLTGWDEISKLLEKINMNNFLGDS 532

Query: 594 NRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETS 653
           ++ L+L  HGSM +  QR IF+ P    RKIVLATNIAE+SITI+DVV+V+DCGKAKETS
Sbjct: 533 SKFLVLPLHGSMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETS 592

Query: 654 YDALNNTPCLLPTWISKVSAQQRKSWSRSTGRV 686
           YDALN   CLLP+WISK SA QR+      GRV
Sbjct: 593 YDALNKVACLLPSWISKASAHQRRG---RAGRV 622


>AT1G58060.1 | Symbols:  | RNA helicase family protein |
            chr1:21489480-21501775 REVERSE LENGTH=1459
          Length = 1459

 Score =  324 bits (830), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 188/472 (39%), Positives = 279/472 (59%), Gaps = 28/472 (5%)

Query: 243  VLLASSKAVAEKVLLRRSLQMRNQQHAWQESPEGRRILEFRSSLPAYKEKEAILSILSRN 302
            V+ ++++A  +  +    L ++ +Q   + + + + +L+ R++LP  + K  IL  L   
Sbjct: 571  VVKSNNRAKRDSYIEAECLSLQRKQENKKRTQKYKDMLKTRTALPISEVKNGILQHLKEK 630

Query: 303  QVVIISGETGCGKTTQIPQFILESEIEAVRGAACNIICTQPRRISAMSVSERVASERGEK 362
             V+++ GETG GKTTQ+PQFIL+  I++  G  CNIICTQPRRI+A+SV++RVA ER E 
Sbjct: 631  DVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPRRIAAISVAQRVADERCES 690

Query: 363  ---LGES-VGYKVRLEGVKGRDTHILFCTTGILLRRLLADRNLEGVTHVIVDEIHERGMN 418
               L +S VGY+VRLE  +   T +LFCTTGILLR+L  DR L  VTH+IVDE+HER + 
Sbjct: 691  SPGLDDSLVGYQVRLESARSDKTRLLFCTTGILLRKLAGDRTLNDVTHIIVDEVHERSLL 750

Query: 419  EDFXXXXXXXXXXHRP------ELKLILMSATLDAELFSSYFNGAPIMNIPGFTYPVRTY 472
             DF           +       +LK+ILMSAT+DA+LFS YF   P++   G T+PV T+
Sbjct: 751  GDFLLIILKSLIEKQSCDNTSRKLKVILMSATVDADLFSRYFGHCPVITAQGRTHPVTTH 810

Query: 473  FLENILEMTGYRLTPYN----QIDDYGQERMWKMNKQAPRKRKSQIASTVEDAIRAAD-- 526
            FLE I E   Y L P +    + D   ++++  +N +  +K    +A   +D + + D  
Sbjct: 811  FLEEIYESINYLLAPDSPAALRSDTSIKDKLGSVNDRRGKKNLV-LAGWGDDYLLSEDCL 869

Query: 527  --------FKDYSPQTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDIS 578
                    +  YS QTQ++L   N D I + L+E ++C+I +    GA+L+F+ G  +I 
Sbjct: 870  NPFYVSSNYNSYSDQTQQNLKRLNEDRIDYELLEELICHIDDTCEEGAILIFLPGVAEIY 929

Query: 579  SLKEKLLRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITIN 638
             L + L  +     P    LL  H S+ASSEQR +F  P  G+RK++ ATNIAETSITI+
Sbjct: 930  MLLDMLAASYRFRGPAADWLLPLHSSIASSEQRKVFLRPPKGLRKVIAATNIAETSITID 989

Query: 639  DVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRKSWSRSTGRVLPSL 690
            DVV+V+D GK KE  Y+       ++  WIS+ +A+QR   +   GRV P +
Sbjct: 990  DVVYVIDSGKHKENRYNPQKKLSSMVEDWISQANARQR---TGRAGRVKPGI 1038


>AT1G58050.1 | Symbols:  | RNA helicase family protein |
            chr1:21478590-21487839 REVERSE LENGTH=1417
          Length = 1417

 Score =  290 bits (743), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 170/440 (38%), Positives = 256/440 (58%), Gaps = 24/440 (5%)

Query: 263  MRNQQHAWQESPEGRRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQF 322
            ++ +Q   ++  + + +L+ R++LP  + K+ IL  L    V+++ GETG GKTTQ+PQF
Sbjct: 574  LKQKQENKKKMQKYKDMLKTRAALPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVPQF 633

Query: 323  ILESEIEAVRGAACNIICTQPRRISAMSVSERVASERGEK----LGESVGYKVRLEGVKG 378
            IL+  I++  G  CNIICTQPR   A++V++RVA ER E         V Y+VR +  + 
Sbjct: 634  ILDDMIDSGHGGYCNIICTQPR---AITVAQRVADERCEPPPGFDNSVVAYQVRHQNARS 690

Query: 379  RDTHILFCTTGILLRRLLADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHR----- 433
              T +LFCTTGILLR+L+ D  L+ VTH+IVDE+HER +  DF           +     
Sbjct: 691  DKTRLLFCTTGILLRKLVGDTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNA 750

Query: 434  -PELKLILMSATLDAELFSSYFNGAPIMNIPGFTYPVRTYFLENILEMTGYRL---TPYN 489
             P+LK+ILMSAT+DA  FS YF   PI+   G T+PV TYFLE+I E T Y L   +P  
Sbjct: 751  LPKLKVILMSATVDAHQFSRYFGQCPIITAQGRTHPVTTYFLEDIYERTKYLLASDSPAA 810

Query: 490  QIDDYG-QERMWKMNKQAPRKRKSQIASTVEDAIRAADFKDYSPQTQESLSCWNPDCIGF 548
               D    +++  +N   PR +K+ + +   D+   ++  D    + +S+       + +
Sbjct: 811  LSSDTSITDKLGSVN--VPRGKKNLMLAGWGDSYLVSE--DSLNTSYDSIKYIASAVVDY 866

Query: 549  SLIEYILCNICENERPGAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVLLLACHGSMASS 608
             L+E ++C+I +    GA+LVF+ G  +I+ L  +L  +      +   LL  H S+AS+
Sbjct: 867  DLLEELICHIDDTCEEGAILVFLPGMSEINMLLNRLAASYRFRGASGDWLLPLHSSIAST 926

Query: 609  EQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWI 668
            EQ+ +F  P  G+RK+++ATNIAETSITI DVV+V+D GK KE  Y+       ++  W+
Sbjct: 927  EQKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWV 986

Query: 669  SKVSAQQRKSWSRSTGRVLP 688
            SK +A+QR       GRV P
Sbjct: 987  SKANARQRMG---RAGRVKP 1003


>AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissue
           and tapetum | chr2:13120585-13126635 REVERSE LENGTH=1299
          Length = 1299

 Score =  233 bits (595), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 112/207 (54%), Positives = 145/207 (70%), Gaps = 4/207 (1%)

Query: 277 RRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAAC 336
           + I + RS LP    K+AI S +  NQV++ISGETGCGKTTQ+PQ++L+    + R   C
Sbjct: 178 KEITKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKR-ETC 236

Query: 337 NIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLL 396
            I+CTQPRRISAMSVSER++ ERGE +GE++GYKVRL+   GR + ++FCT GILLR L+
Sbjct: 237 KIVCTQPRRISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLV 296

Query: 397 ADRNLEGV---THVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSY 453
              ++  V   TH+IVDEIHER    DF            P L+LILMSATLDAE FS Y
Sbjct: 297 GKGSVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSGY 356

Query: 454 FNGAPIMNIPGFTYPVRTYFLENILEM 480
           F G P++ +PGFTYPVRT +LE++L +
Sbjct: 357 FGGCPVVRVPGFTYPVRTLYLEDVLSI 383



 Score =  136 bits (343), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 63/153 (41%), Positives = 97/153 (63%), Gaps = 3/153 (1%)

Query: 538 LSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVL 597
           ++  NP+ +  SLI+ ++  IC +   GA+LVF+ GWDDI+  +++LL N    D  +  
Sbjct: 525 MATINPEQVDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSAKFD 584

Query: 598 LLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDAL 657
           ++  H  + + EQ+ +F  P  G RKIVLATNIAE+++TI+DVV+V+D G+ KE SYD  
Sbjct: 585 IICLHSMVPAGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPY 644

Query: 658 NNTPCLLPTWISKVSAQQRKSWSRSTGRVLPSL 690
           NN   L  +W+SK +A+QR+      GR  P +
Sbjct: 645 NNVSTLQSSWVSKANAKQRQG---RAGRCQPGI 674


>AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase |
           chr1:2040567-2047333 FORWARD LENGTH=1576
          Length = 1576

 Score =  232 bits (591), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 111/207 (53%), Positives = 148/207 (71%), Gaps = 4/207 (1%)

Query: 277 RRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAAC 336
           R I E RS LP    ++AI+S +  NQVV+I+GETGCGKTTQ+PQ++L+    + +  AC
Sbjct: 208 REIFEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHS-KKEAC 266

Query: 337 NIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLL 396
            IICTQPRRISA+SVS+R++ ERGE +G +VGYKVRL+   GR++ ++FCT GILLR L+
Sbjct: 267 KIICTQPRRISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVLI 326

Query: 397 A---DRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSY 453
               + ++  +TH+IVDEIHER    DF            P L+LILMSATLDAE FS Y
Sbjct: 327 GKGVNSSVPDITHIIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEY 386

Query: 454 FNGAPIMNIPGFTYPVRTYFLENILEM 480
           F G P++ +PGFTYPVRT+FL++ L +
Sbjct: 387 FGGCPVVRVPGFTYPVRTFFLDDALSV 413



 Score =  130 bits (326), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 63/157 (40%), Positives = 97/157 (61%), Gaps = 4/157 (2%)

Query: 524 AADFKDYSPQTQESLSCW----NPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISS 579
           A + +  S Q Q+ L  +     P+ +   LI  ++  IC + + GA+LVF+ GW++IS 
Sbjct: 531 AGNIQSNSQQAQDLLDKYMATIKPEEVDVGLIVKLMKKICSDSKDGAILVFLPGWEEISK 590

Query: 580 LKEKLLRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITIND 639
            KEKLL +       + ++L  H  + + EQ+ +F  P  G RKIVLATNIAE+++TI+D
Sbjct: 591 TKEKLLDDRFFAHSAKFIILCLHSRVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDD 650

Query: 640 VVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQR 676
           VV+V+D G+ KE SYD  N+   L  +W+SK +A+QR
Sbjct: 651 VVYVIDSGRMKEKSYDPYNDVSTLQSSWVSKANAKQR 687


>AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein |
           chr5:4122747-4128660 FORWARD LENGTH=1255
          Length = 1255

 Score =  213 bits (541), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 143/431 (33%), Positives = 214/431 (49%), Gaps = 80/431 (18%)

Query: 262 QMRNQQHAWQESPEGRRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQ 321
           Q   +  A  E    + + E R  LP +  ++ +L ++  NQV+++ GETG GKTTQ+ Q
Sbjct: 534 QHMKKGEAVSEFAMSKTMAEQRQYLPIFSVRDELLQVIRENQVIVVVGETGSGKTTQLTQ 593

Query: 322 FILESEIEAVRGAACNII--CTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGR 379
           ++ E       G   N I  CTQPRR++AMSV++RV+ E   +LG+ +GY +R E V G 
Sbjct: 594 YLHED------GYTINGIVGCTQPRRVAAMSVAKRVSEEMETELGDKIGYAIRFEDVTGP 647

Query: 380 DTHILFCTTGILLRRLLADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLI 439
           +T I + T G+LLR  L D +L+    V++DE HER +N D            R + KLI
Sbjct: 648 NTVIKYMTDGVLLRETLKDSDLDKYRVVVMDEAHERSLNTDVLFGILKKVVARRRDFKLI 707

Query: 440 LMSATLDAELFSSYFNGAPIMNIPGFTYPVRTYFLENILEMTGYRLTPYNQIDDYGQERM 499
           + SATL+A+ FS++F   PI NIPG T+PV      NIL    Y  TP    +DY     
Sbjct: 708 VTSATLNAQKFSNFFGSVPIFNIPGRTFPV------NIL----YSKTP---CEDY----- 749

Query: 500 WKMNKQAPRKRKSQIASTVEDAIRAADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNIC 559
                             VE A++ A                                I 
Sbjct: 750 ------------------VEAAVKQA------------------------------MTIH 761

Query: 560 ENERPGAVLVFMTGWDDIS----SLKEKL--LRNNVLGDPNRVLLLACHGSMASSEQRLI 613
               PG +L+FMTG D+I     SLKE++  L ++   +   +L+L  +  + +  Q  I
Sbjct: 762 ITSPPGDILIFMTGQDEIEAACFSLKERMEQLVSSSSREITNLLILPIYSQLPADLQAKI 821

Query: 614 FEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSA 673
           F++PEDG RK ++ATNIAETS+T++ + +V+D G  K   ++       L    IS+ ++
Sbjct: 822 FQKPEDGARKCIVATNIAETSLTVDGIYYVIDTGYGKMKVFNPRMGMDALQVFPISRAAS 881

Query: 674 QQRKSWSRSTG 684
            QR   +  TG
Sbjct: 882 DQRAGRAGRTG 892


>AT4G18465.1 | Symbols:  | RNA helicase family protein |
           chr4:10197056-10201611 FORWARD LENGTH=695
          Length = 695

 Score =  194 bits (492), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 140/412 (33%), Positives = 206/412 (50%), Gaps = 62/412 (15%)

Query: 283 RSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNIICTQ 342
           R  LP YK +  IL ++  +   II GETG GKTTQIPQ++ E+      G    I CTQ
Sbjct: 45  RQRLPVYKYRTEILYLVENHATTIIVGETGSGKTTQIPQYLKEAG--WAEGGRV-IACTQ 101

Query: 343 PRRISAMSVSERVASERGEKLGESVGYKVRLEG-VKGRDTHILFCTTGILLRRLLADRNL 401
           PRR++  +VS RVA E G  LGE VGY +R E       T + F T G+L+R ++ D  L
Sbjct: 102 PRRLAVQAVSARVAEEMGVNLGEEVGYTIRFEDHTTSGVTSVKFLTDGVLIREMMEDPLL 161

Query: 402 EGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFNGAPIMN 461
              + +++DE HER ++ D            RPEL+LI+ SAT++A+  S++FN +   +
Sbjct: 162 TKYSVIMIDEAHERSISTDILLGLLKKIQRRRPELRLIISSATIEAKTMSNFFNSSKKRH 221

Query: 462 IPGFTYPVRTYFLENILEMTGYRLTPYNQIDDYGQERMWKMNKQAPRKRKSQIASTVEDA 521
            P  + P             G +L P           +  +  +    +   +   V D 
Sbjct: 222 APEGSTP-------------GPKLEP----------AILSVEGRGFSVKIHYVEEPVSDY 258

Query: 522 IRAADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISS-- 579
           IR                         S++  IL  I E E PG VLVF+TG +DI +  
Sbjct: 259 IR-------------------------SVVSTILL-INEREPPGDVLVFLTGQEDIETAI 292

Query: 580 --LKEKLLRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITI 637
             L+E+   N    + + +L L  +  ++ SEQ LIF     G RK++L+TNIAETS+T+
Sbjct: 293 KLLEEEAHSNQ--KNSSGLLPLPLYSGLSRSEQELIFTPTPRGKRKVILSTNIAETSLTL 350

Query: 638 NDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRKSWSRSTGRVLPS 689
             VV+V+D G +K+  Y+ +++   L+   ISK SA+QR   S   GRV P 
Sbjct: 351 EGVVYVIDSGFSKQKFYNPISDIESLVVAPISKASARQR---SGRAGRVRPG 399


>AT2G47250.1 | Symbols:  | RNA helicase family protein |
           chr2:19399923-19402981 REVERSE LENGTH=729
          Length = 729

 Score =  177 bits (448), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 89/199 (44%), Positives = 126/199 (63%), Gaps = 2/199 (1%)

Query: 279 ILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEI--EAVRGAAC 336
           ILE R  LP + +K+  L+ L+ NQ +I+ GETG GKTTQIPQF+L++ +   + +G   
Sbjct: 58  ILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKW 117

Query: 337 NIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLL 396
            + CTQPRR++AMSVS RVA E    +GE VGY +R E      T + + T G+LLR  +
Sbjct: 118 LVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAM 177

Query: 397 ADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFNG 456
           AD  LE    +I+DE HER +  D           +RP+LKL++MSATL+AE F  YF+G
Sbjct: 178 ADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSG 237

Query: 457 APIMNIPGFTYPVRTYFLE 475
           AP+M +PG  +PV  ++ +
Sbjct: 238 APLMKVPGRLHPVEIFYTQ 256



 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 78/139 (56%), Gaps = 16/139 (11%)

Query: 562 ERPGAVLVFMTGWDDISSLKEKLLRN-NVLGD---PNRVLLLACHGSMASSEQRLIFE-- 615
           E PG +LVF+TG ++I     K+ +  + LGD   P +V+ L  + ++  + Q+ IF+  
Sbjct: 277 EPPGDILVFLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPL--YSTLPPAMQQKIFDPA 334

Query: 616 -----EPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISK 670
                E     RKIV++TNIAETS+TI+ +V+V+D G AK+  Y+       LL + ISK
Sbjct: 335 PVPLTEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISK 394

Query: 671 VSAQQRKSWSRSTGRVLPS 689
            SA QR   S   GR  P 
Sbjct: 395 ASAHQR---SGRAGRTRPG 410


>AT3G62310.1 | Symbols:  | RNA helicase family protein |
           chr3:23057516-23060561 REVERSE LENGTH=726
          Length = 726

 Score =  175 bits (444), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 94/217 (43%), Positives = 129/217 (59%), Gaps = 13/217 (5%)

Query: 268 HAWQESPEGRR---ILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFIL 324
           + W   P  +R   ILE R +LP + +KE  L  L+ NQ +I+ GETG GKTTQIPQF+ 
Sbjct: 40  NKWNGKPYSQRYYDILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFV- 98

Query: 325 ESEIEAVRGAACN------IICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKG 378
              I+AV     +      + CTQPRR++AMSVS RVA E    +GE VGY +R E    
Sbjct: 99  ---IDAVDAETSDKRRKWLVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSS 155

Query: 379 RDTHILFCTTGILLRRLLADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKL 438
             T + + T G+LLR  +AD  LE    +I+DE HER +  D           +RP+LKL
Sbjct: 156 PRTVLKYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKL 215

Query: 439 ILMSATLDAELFSSYFNGAPIMNIPGFTYPVRTYFLE 475
           ++MSATL+AE F  YF+GAP+M +PG  +PV  ++ +
Sbjct: 216 VVMSATLEAEKFQDYFSGAPLMKVPGRLHPVEIFYTQ 252



 Score = 69.7 bits (169), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 78/139 (56%), Gaps = 16/139 (11%)

Query: 562 ERPGAVLVFMTGWDDISSLKEKLLRN-NVLGD---PNRVLLLACHGSMASSEQRLIFEEP 617
           E PG +LVF+TG ++I     K+ +    LGD   P +V+ L  + ++  + Q+ IF+  
Sbjct: 273 EPPGDILVFLTGEEEIEDACRKINKEVGNLGDQVGPIKVVPL--YSTLPPAMQQKIFDPA 330

Query: 618 EDGV-------RKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISK 670
            + V       RKIV++TNIAETS+TI+ +V+V+D G AK+  Y+       LL + ISK
Sbjct: 331 PEPVTEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISK 390

Query: 671 VSAQQRKSWSRSTGRVLPS 689
            SA QR   S   GR  P 
Sbjct: 391 ASAHQR---SGRAGRTRPG 406


>AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein |
           chr1:11742356-11749286 REVERSE LENGTH=1034
          Length = 1034

 Score =  169 bits (428), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 88/189 (46%), Positives = 118/189 (62%), Gaps = 4/189 (2%)

Query: 281 EFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNIIC 340
           E R SLP Y  ++ +L  +  +QV++I G+TG GKTTQIPQ++ E+     RG    + C
Sbjct: 389 EVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGY-TKRG---KVGC 444

Query: 341 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLADRN 400
           TQPRR++AMSV+ RVA E G KLG  VGY +R E      T + + T G+LLR LL + +
Sbjct: 445 TQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPD 504

Query: 401 LEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFNGAPIM 460
           L   + VIVDE HER ++ D            RP+LKL++ SAT+DAE FS YF+ API 
Sbjct: 505 LASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIF 564

Query: 461 NIPGFTYPV 469
           + PG  YPV
Sbjct: 565 SFPGRRYPV 573



 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 51/128 (39%), Positives = 76/128 (59%), Gaps = 7/128 (5%)

Query: 565 GAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVL-LLAC--HGSMASSEQRLIFEEPEDGV 621
           G +LVF TG ++I +  E++L++ + G   ++  L+ C  + ++ S  Q  IFE   +G 
Sbjct: 603 GDILVFFTGQEEIET-AEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGA 661

Query: 622 RKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRKSWSR 681
           RK+VLATNIAETS+TI+ + +V+D G +K  SY+       LL T ISK SA QR   + 
Sbjct: 662 RKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRA- 720

Query: 682 STGRVLPS 689
             GR  P 
Sbjct: 721 --GRTSPG 726


>AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family protein
           | chr1:11742356-11749286 REVERSE LENGTH=1044
          Length = 1044

 Score =  169 bits (428), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 88/189 (46%), Positives = 118/189 (62%), Gaps = 4/189 (2%)

Query: 281 EFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNIIC 340
           E R SLP Y  ++ +L  +  +QV++I G+TG GKTTQIPQ++ E+     RG    + C
Sbjct: 399 EVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGY-TKRG---KVGC 454

Query: 341 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLADRN 400
           TQPRR++AMSV+ RVA E G KLG  VGY +R E      T + + T G+LLR LL + +
Sbjct: 455 TQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPD 514

Query: 401 LEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFNGAPIM 460
           L   + VIVDE HER ++ D            RP+LKL++ SAT+DAE FS YF+ API 
Sbjct: 515 LASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIF 574

Query: 461 NIPGFTYPV 469
           + PG  YPV
Sbjct: 575 SFPGRRYPV 583



 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 51/128 (39%), Positives = 76/128 (59%), Gaps = 7/128 (5%)

Query: 565 GAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVL-LLAC--HGSMASSEQRLIFEEPEDGV 621
           G +LVF TG ++I +  E++L++ + G   ++  L+ C  + ++ S  Q  IFE   +G 
Sbjct: 613 GDILVFFTGQEEIET-AEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGA 671

Query: 622 RKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRKSWSR 681
           RK+VLATNIAETS+TI+ + +V+D G +K  SY+       LL T ISK SA QR   + 
Sbjct: 672 RKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRA- 730

Query: 682 STGRVLPS 689
             GR  P 
Sbjct: 731 --GRTSPG 736


>AT3G26560.1 | Symbols:  | ATP-dependent RNA helicase, putative |
           chr3:9750122-9753719 REVERSE LENGTH=1168
          Length = 1168

 Score =  167 bits (424), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 89/195 (45%), Positives = 119/195 (61%), Gaps = 4/195 (2%)

Query: 279 ILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNI 338
           I E R SLP YK K+ ++  +  NQV+++ GETG GKTTQ+ Q++     EA       I
Sbjct: 508 IQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYL----AEAGYTTKGKI 563

Query: 339 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLAD 398
            CTQPRR++AMSV++RVA E G +LGE VGY +R E   G DT I + T G+LLR +L D
Sbjct: 564 GCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILID 623

Query: 399 RNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFNGAP 458
            NL   + +++DE HER ++ D            R +L+LI+ SATLDAE FS YF    
Sbjct: 624 ENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCN 683

Query: 459 IMNIPGFTYPVRTYF 473
           I  IPG T+PV   +
Sbjct: 684 IFTIPGRTFPVEILY 698



 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 83/143 (58%), Gaps = 4/143 (2%)

Query: 544 DCIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKLL-RNNVLG-DPNRVLLLAC 601
           D +  +LI  +  ++ E E  G +LVF+TG ++I S  + L  R   LG +   +++L  
Sbjct: 705 DYLDAALITVLQIHLTEPE--GDILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPV 762

Query: 602 HGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTP 661
           + ++ S  Q  IF+ P  G RK+V+ATNIAE S+TI+ + +V+D G AK+  Y+      
Sbjct: 763 YSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLE 822

Query: 662 CLLPTWISKVSAQQRKSWSRSTG 684
            L+ T IS+ SA+QR   +  TG
Sbjct: 823 SLVITPISQASAKQRAGRAGRTG 845


>AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protein |
           chr2:14872728-14879615 FORWARD LENGTH=1044
          Length = 1044

 Score =  166 bits (421), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 86/193 (44%), Positives = 117/193 (60%), Gaps = 4/193 (2%)

Query: 281 EFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNIIC 340
           E R +LP Y  ++ +L+ +  +QV+II GETG GKTTQIPQ++ E+    +      + C
Sbjct: 399 EDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKL----GKVGC 454

Query: 341 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLADRN 400
           TQPRR++AMSV+ RVA E G KLG  VGY +R E      T + + T G+LLR LL + +
Sbjct: 455 TQPRRVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPD 514

Query: 401 LEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFNGAPIM 460
           L   + +IVDE HER +  D            RP+LKL++ SAT+DAE FS +F+ API 
Sbjct: 515 LGSYSVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDFFDQAPIF 574

Query: 461 NIPGFTYPVRTYF 473
             PG  YPV   F
Sbjct: 575 RFPGRRYPVDICF 587



 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 73/127 (57%), Gaps = 5/127 (3%)

Query: 565 GAVLVFMTGWDDISSLKEKLLRN-NVLGDPNRVLLLA-CHGSMASSEQRLIFEEPEDGVR 622
           G VLVF+ G ++I +++E L      LG   R L++   + ++ S  Q  IFE   +G R
Sbjct: 613 GDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGAR 672

Query: 623 KIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRKSWSRS 682
           K+VLATNIAETS+TI+ + +V+D G +K  SY+       LL T ISK SA QR   +  
Sbjct: 673 KVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQR---TGR 729

Query: 683 TGRVLPS 689
            GR  P 
Sbjct: 730 AGRTSPG 736


>AT4G16680.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr4:9388613-9390774
           REVERSE LENGTH=656
          Length = 656

 Score =  164 bits (414), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 89/193 (46%), Positives = 118/193 (61%), Gaps = 4/193 (2%)

Query: 281 EFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNIIC 340
           E R  LP +  +E +L ++  NQV++I GETG GKTTQIPQ++ E+     RG    I C
Sbjct: 210 EGREFLPIHGYREELLKLIEENQVLVIVGETGSGKTTQIPQYLQEAGYTK-RG---KIGC 265

Query: 341 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLADRN 400
           TQPRR++AMSV+ RVA E G KLG  VGY +R E      T I + T G+LLR LL +  
Sbjct: 266 TQPRRVAAMSVASRVAQEVGVKLGHEVGYSIRFEDCTSEKTVIKYMTDGMLLRELLIEPK 325

Query: 401 LEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFNGAPIM 460
           L+  + +I+DE HER ++ D            RP+L+LI+ SATL+A+ FS YF+ A I 
Sbjct: 326 LDSYSVIIIDEAHERTLSTDILFALVKDVAKVRPDLRLIISSATLEAKKFSEYFDSARIY 385

Query: 461 NIPGFTYPVRTYF 473
            IPG  YPV   F
Sbjct: 386 LIPGRRYPVEKLF 398



 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 81/147 (55%), Gaps = 4/147 (2%)

Query: 540 CWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKLLRNNV-LGDP-NRVL 597
           C  PD +    +   +  I + E  G +LVF+TG ++I +++  L R  + LG   + ++
Sbjct: 401 CPEPDYL--ETVIRTVVQIHQTEAIGDILVFLTGQEEIETVETNLKRRMMDLGTKGSEII 458

Query: 598 LLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDAL 657
           +   + ++ +  Q  +FE    G RK+VLATNIAETS+TI+ V +V+D G  K  SY+  
Sbjct: 459 ICPIYSNLPTPLQAKVFEPAPKGTRKVVLATNIAETSLTIDGVKYVIDPGYCKINSYNPR 518

Query: 658 NNTPCLLPTWISKVSAQQRKSWSRSTG 684
                LL T ISK SA QR   S  TG
Sbjct: 519 TGMESLLVTPISKASAAQRAGRSGRTG 545


>AT1G27900.1 | Symbols:  | RNA helicase family protein |
           chr1:9715615-9720346 REVERSE LENGTH=700
          Length = 700

 Score =  164 bits (414), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 187/410 (45%), Gaps = 77/410 (18%)

Query: 284 SSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNIICTQP 343
           ++LP  + +E I+  + +N VV+I GETG GK+TQ+ Q IL        G    I  TQP
Sbjct: 2   ANLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQ-ILHRHGYTKSGV---IAITQP 57

Query: 344 RRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLADRNLEG 403
           RR++A+SV+ RVA E    LGE VGY +R E      T I + T G+LLR  L++  L+ 
Sbjct: 58  RRVAAVSVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDD 117

Query: 404 VTHVIVDEIHERGMNEDFXXXXXXXXXXHRPE-LKLILMSATLDAELFSSYFNGAPIMNI 462
            + +I+DE HER +N D            R    K+++ SATLD E  S +F+G      
Sbjct: 118 YSVIILDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGC----- 172

Query: 463 PGFTYPVRTYFLENILEMTGYRLTPYNQIDDYGQERMWKMNKQAPRKRKSQIASTVEDAI 522
           P    P + Y +E +                Y +ER                 S +E ++
Sbjct: 173 PVLNVPGKLYPVEIL----------------YSKERP---------------VSYIESSL 201

Query: 523 RAADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKE 582
           + A                               +I   E  G +L+FMTG DDI  L  
Sbjct: 202 KVA------------------------------IDIHVREPEGDILIFMTGQDDIEKLVS 231

Query: 583 KL---LRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITIND 639
           +L   +R+   G     ++   HGS+    Q  +F  P    R+ +++TNIAETS+T++ 
Sbjct: 232 RLEEKVRSLAEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDG 291

Query: 640 VVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRKSWSRSTGRVLPS 689
           VV+V+D G  K+  Y+  +    L    ISKV A QR   +   GR  P 
Sbjct: 292 VVYVIDSGYVKQRQYNPSSGMFSLDVIQISKVQANQRAGRA---GRTRPG 338


>AT5G10370.1 | Symbols:  | helicase domain-containing protein / IBR
           domain-containing protein / zinc finger protein-related
           | chr5:3261245-3267188 FORWARD LENGTH=1775
          Length = 1775

 Score =  156 bits (395), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 185/414 (44%), Gaps = 73/414 (17%)

Query: 277 RRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAAC 336
           R        LP Y  +  IL  + R Q++++ GETG GK+TQ+ QF+ +S +     A+ 
Sbjct: 297 RECRRLEDGLPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGV----AASE 352

Query: 337 NIICTQPRRISAMSVSERVASERGEKLGE-SVGYKVRLEGVKGRDTHILFCTTGILLRRL 395
           +I+CTQPR+I+AM++++RV  E      E +V         +   + +++ T   LL+  
Sbjct: 353 SIVCTQPRKIAAMTLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHY 412

Query: 396 LADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFN 455
           + DR+L G++ VI+DE HER +N D            R +L+L++MSAT DA+  S YF 
Sbjct: 413 MKDRSLSGISCVIIDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFF 472

Query: 456 GAPIMNIPGFTYPVRTYFLENILEMTGYRLTPYNQIDDYGQERMWKMNKQAPRKRKSQIA 515
              I+ + G  +PV                           E ++  +          IA
Sbjct: 473 SCGILLVNGRNFPV---------------------------EIVYSPSDTEENSVVGGIA 505

Query: 516 STVEDAIRAADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWD 575
           S V D ++ A                                I + E+ G +L F+T   
Sbjct: 506 SYVGDVVKMA------------------------------VEIHKTEKEGTILAFLTSQA 535

Query: 576 DISSLKEKLLRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSI 635
           ++    E+ +  + +  P        HG ++  EQ  +F+    G RK++ ATNIAETS+
Sbjct: 536 EVEWACERFITPSAIALP-------LHGKLSFEEQFRVFQN-HPGRRKVIFATNIAETSL 587

Query: 636 TINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRKSWSRSTGRVLPS 689
           TI  V +V+D G  KE+ Y+       L    +S+ SA+QR       GR  P 
Sbjct: 588 TIPGVKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAG---RAGRTEPG 638


>AT4G01020.1 | Symbols:  | helicase domain-containing protein / IBR
           domain-containing protein / zinc finger protein-related
           | chr4:439086-445043 FORWARD LENGTH=1787
          Length = 1787

 Score =  150 bits (379), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 186/414 (44%), Gaps = 73/414 (17%)

Query: 277 RRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAAC 336
           R        LP Y  +  IL  +   Q++++ GETG GK+TQ+ QF+ +S + A      
Sbjct: 294 RECRRLEDGLPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASE---- 349

Query: 337 NIICTQPRRISAMSVSERVASERGEKLGE-SVGYKVRLEGVKGRDTHILFCTTGILLRRL 395
           +I+CTQPR+I+AM++++RV  E      E +V         +   + +++ T   LL+  
Sbjct: 350 SIVCTQPRKIAAMTLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHY 409

Query: 396 LADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFN 455
           + DR+L G++ VI+DE HER +N D            R +L+L++MSAT DA   S Y  
Sbjct: 410 MKDRSLSGISCVIIDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYLF 469

Query: 456 GAPIMNIPGFTYPVRTYFLENILEMTGYRLTPYNQIDDYGQERMWKMNKQAPRKRKSQIA 515
              I+++ G  +PV     E +   +G   T  N +                     +IA
Sbjct: 470 DCGILHVNGRNFPV-----EIVYSPSG---TEENSV-------------------VGRIA 502

Query: 516 STVEDAIRAADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWD 575
           S   D ++ A                                I + E+ G +L F+T   
Sbjct: 503 SYAGDVVKMA------------------------------VEIHKTEKEGTILAFLTSQA 532

Query: 576 DISSLKEKLLRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSI 635
           ++    E+ +  + +  P        HG ++  EQ ++F+    G RK++ ATNIAETS+
Sbjct: 533 EVEWACERFVAPSAIALP-------LHGKLSFEEQFMVFQN-YPGRRKVIFATNIAETSL 584

Query: 636 TINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRKSWSRSTGRVLPS 689
           TI  V +V+D G  KE+ Y+       L    +S+ SA+QR       GR  P 
Sbjct: 585 TIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAG---RAGRTEPG 635


>AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protein |
           chr1:12099738-12104108 REVERSE LENGTH=1237
          Length = 1237

 Score =  129 bits (325), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 127/242 (52%), Gaps = 30/242 (12%)

Query: 279 ILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNI 338
           + E R  LP    ++ I+  ++R+  VIISG+TGCGKTTQ+PQF+ E+   + + ++ + 
Sbjct: 234 VEETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRSG 293

Query: 339 IC--TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLL 396
           I   TQPRR++ ++ ++RVA E G +LG+ VG++VR +   G ++ I F T GILLR + 
Sbjct: 294 IIGITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLREIQ 353

Query: 397 ADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPE--------------------- 435
            D  L   + +I+DE HER +N D            R E                     
Sbjct: 354 NDFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQEYYEEQQKSLQSGGTVTSECQI 413

Query: 436 --LKLILMSATLDAELFSS----YFNGAPIMNIPGFTYPVRTYFLENILEMTGYRLTPYN 489
             LKLILMSATL  E F S    + N  P++ +P   YPV  +F +   E+  Y    Y 
Sbjct: 414 TPLKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKKT-EIVDYIGEAYK 472

Query: 490 QI 491
           ++
Sbjct: 473 KV 474



 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 53/92 (57%)

Query: 593 PNRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKET 652
           P ++ +L  +  ++ + Q  +FEE E   R +V+ATN+AETS+TI  + +V+D G+ K  
Sbjct: 644 PGKLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVK 703

Query: 653 SYDALNNTPCLLPTWISKVSAQQRKSWSRSTG 684
           +YD+          WIS+ SA QR   +  TG
Sbjct: 704 NYDSKTGMESYEVDWISQASASQRAGRAGRTG 735


>AT1G26370.1 | Symbols:  | RNA helicase family protein |
           chr1:9122030-9125368 REVERSE LENGTH=717
          Length = 717

 Score =  122 bits (307), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 116/234 (49%), Gaps = 44/234 (18%)

Query: 277 RRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAAC 336
           ++I E R SLP    ++ ++  + +N ++II GETG GKTTQ+PQF+  +      G   
Sbjct: 32  QKIAEHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGF-CREGKMI 90

Query: 337 NIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLL 396
            I  TQPRRI+A++V++RVA E   +LG+ VGY +R +      T + + T G+LLR  L
Sbjct: 91  GI--TQPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLREAL 148

Query: 397 ADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPE--------------------- 435
            D +L   + +IVDE H+R ++ D            R +                     
Sbjct: 149 LDPHLSRYSVIIVDEAHDRSVHTDVLLALLKKIQRTRSQPVSEKTEFGNVASQVQTTTRD 208

Query: 436 --------------------LKLILMSATLDAELFSSYFNGAPIMNIPGFTYPV 469
                               LKLI+MSA+LDA +FS YF GA  +++ G  +PV
Sbjct: 209 ANGPQQNGVLKGYQGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPV 262



 Score = 80.5 bits (197), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 70/126 (55%), Gaps = 4/126 (3%)

Query: 562 ERPGAVLVFMTGWDDISSLKEKLLR---NNVLGDPNRVLLLACHGSMASSEQRLIFEEPE 618
           E+PG +LVF+TG D+I S+ E+L++    N+  D  ++L LA   ++ S +Q  +F    
Sbjct: 289 EKPGDILVFLTGQDEIESV-ERLVQERLQNIPEDKRKLLPLAIFSALPSEQQMKVFAPAP 347

Query: 619 DGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRKS 678
            G RK++LATNIAETSITI  + +V+D G  K  SYD       L     SK    QR  
Sbjct: 348 TGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVVPASKAQTLQRSG 407

Query: 679 WSRSTG 684
            +   G
Sbjct: 408 RAGREG 413


>AT2G47680.1 | Symbols:  | zinc finger (CCCH type) helicase family
           protein | chr2:19545828-19550871 REVERSE LENGTH=1015
          Length = 1015

 Score =  106 bits (264), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 61/173 (35%), Positives = 96/173 (55%), Gaps = 10/173 (5%)

Query: 284 SSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNIICTQP 343
           +SLP    K  I+  +  N+V +I GE GCGK++Q+PQF+LE+ +         I+CTQP
Sbjct: 24  ASLPIMAMKRRIIDKILENRVTLIVGEPGCGKSSQVPQFLLEANMAP-------ILCTQP 76

Query: 344 RRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLADRNLEG 403
           RR + ++V++ VA  R   LG  +GY +    +    + ILF T G+LL  +L D+ L  
Sbjct: 77  RRFAVVAVAKMVAKSRNSDLGGEIGYHIGHSKILTEGSKILFKTAGVLLDEML-DKGLNA 135

Query: 404 VTH--VIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYF 454
           + +  +I+DE+HER +  D              +L+++LMSAT D   +  YF
Sbjct: 136 LKYKVIILDEVHERSVESDLVLVCVKQFLMKNNDLRVVLMSATADITRYRDYF 188