Miyakogusa Predicted Gene

Lj5g3v2169560.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2169560.1 Non Chatacterized Hit- tr|I1NFR4|I1NFR4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,83.27,0,SUBFAMILY NOT
NAMED,NULL; ATP-DEPENDENT RNA HELICASE,NULL; HA2,Helicase-associated
domain; OB_NTP_bi,CUFF.56833.1
         (1154 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G01130.1 | Symbols:  | DEA(D/H)-box RNA helicase family prote...  1497   0.0  
AT1G48650.2 | Symbols:  | DEA(D/H)-box RNA helicase family prote...  1360   0.0  
AT1G48650.1 | Symbols:  | DEA(D/H)-box RNA helicase family prote...  1360   0.0  
AT5G04895.1 | Symbols:  | DEA(D/H)-box RNA helicase family prote...  1252   0.0  
AT2G35920.1 | Symbols:  | RNA helicase family protein | chr2:150...   794   0.0  
AT1G58060.1 | Symbols:  | RNA helicase family protein | chr1:214...   514   e-145
AT1G58050.1 | Symbols:  | RNA helicase family protein | chr1:214...   465   e-131
AT2G47250.1 | Symbols:  | RNA helicase family protein | chr2:193...   337   3e-92
AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein | c...   314   2e-85
AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase | chr1:204...   290   3e-78
AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissu...   286   6e-77
AT4G18465.1 | Symbols:  | RNA helicase family protein | chr4:101...   283   6e-76
AT1G27900.1 | Symbols:  | RNA helicase family protein | chr1:971...   265   2e-70
AT5G10370.1 | Symbols:  | helicase domain-containing protein / I...   228   2e-59
AT4G01020.1 | Symbols:  | helicase domain-containing protein / I...   219   7e-57
AT3G62310.1 | Symbols:  | RNA helicase family protein | chr3:230...   193   6e-49
AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein | chr1...   189   1e-47
AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family prote...   188   2e-47
AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protei...   184   2e-46
AT3G26560.1 | Symbols:  | ATP-dependent RNA helicase, putative |...   181   3e-45
AT4G16680.1 | Symbols:  | P-loop containing nucleoside triphosph...   163   8e-40
AT1G26370.1 | Symbols:  | RNA helicase family protein | chr1:912...   161   3e-39
AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protei...   129   1e-29
AT2G47680.1 | Symbols:  | zinc finger (CCCH type) helicase famil...   105   2e-22
AT5G14900.1 | Symbols:  | helicase associated (HA2) domain-conta...    96   2e-19

>AT2G01130.1 | Symbols:  | DEA(D/H)-box RNA helicase family protein |
            chr2:88847-94635 REVERSE LENGTH=1113
          Length = 1113

 Score = 1497 bits (3876), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 736/1116 (65%), Positives = 872/1116 (78%), Gaps = 45/1116 (4%)

Query: 22   MKDRPYGAVYVPPHHRLRSVVTSANHHSAAAAPVSPKLTQNPTPLKTPFLEQAPNNTNSR 81
            M +R   ++YVPPH RL S                     NP PL +P           R
Sbjct: 1    MTNRLPPSLYVPPHQRLGS-----------------DYGFNPVPL-SPV----------R 32

Query: 82   FVSAYDDVVSDDCFDREFQIPLPSSLPSDFPNDNIAEWKRKLSMLLNDKSKQEVISREKK 141
            +VSAYDD VS+D   +E            F   ++ +W ++ SMLL D  KQEVISREKK
Sbjct: 33   YVSAYDDRVSEDRQPQE----------GTFHCADLDDWNKRFSMLLKDSLKQEVISREKK 82

Query: 142  DRHDFEQIAVLATEMGLYSHKYTKVVVFSKVPXXXXXXXXXXXXXXXEVSMPITLFRQVD 201
            DR DF+++A LAT +GLYSH Y KVVVFSK+P               EV++   L ++V+
Sbjct: 83   DRRDFDKLAALATTLGLYSHAYAKVVVFSKIPLPNYRFDLDDKKPQREVNLHTDLLQRVE 142

Query: 202  AHFEEYLRQKSRVNKXXXXXXXXXXXXXXXVGTDEGLFEQPVLLASSKAVAEKVLLRRSL 261
            A+  EYL + S  N+                 TDE   EQP+ ++     A K+L +RSL
Sbjct: 143  AYLTEYLSKSS--NRIDRVPANSVSRTSSISSTDEWFSEQPLPIS-----ATKILWQRSL 195

Query: 262  QMRNQQHAWQESPEGRRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQ 321
            Q+R++Q  WQ S EG+R+L+ R+SLPA+K++ ++L+ +S+NQV++ISGETGCGKTTQIPQ
Sbjct: 196  QLRDRQQYWQASVEGQRMLDSRTSLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQ 255

Query: 322  FILESEIEAVRGAACNIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDT 381
            FILESEIEA RGA  +IICTQPRRISAMSVSERVA ERGE+LGESVGYKVRLEGVKGRDT
Sbjct: 256  FILESEIEANRGAFSSIICTQPRRISAMSVSERVAYERGEQLGESVGYKVRLEGVKGRDT 315

Query: 382  HILFCTTGILLRRLLADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILM 441
             +LFCTTGILLRRLL DRNL GVTHVIVDEIHERGMNEDF           R ELKLILM
Sbjct: 316  RLLFCTTGILLRRLLVDRNLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRSELKLILM 375

Query: 442  SATLDAELFSSYFNGAPIMNIPGFTYPVRTYFLENILEMTGYRLTPYNQIDDYGQERMWK 501
            SATLDAELFSSYF GA ++ IPGFTYPVR++FLE+ILEMT YRLTPYNQIDDYGQER WK
Sbjct: 376  SATLDAELFSSYFGGAGVIYIPGFTYPVRSHFLEDILEMTRYRLTPYNQIDDYGQERTWK 435

Query: 502  MNKQAPRKRKSQIASTVEDAIRAADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICEN 561
            MNKQ P+KRKSQI   VEDA+RAADFK++SP+T+ESLSCW PDCIGF+LIE++LCNICEN
Sbjct: 436  MNKQIPKKRKSQITFVVEDALRAADFKEFSPETRESLSCWYPDCIGFNLIEFLLCNICEN 495

Query: 562  ERPGAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPEDGV 621
            E PG +L+F+TGWDDISSLKEKL  + + G+P+ V+LLACHGSM + EQRLIFEEP  GV
Sbjct: 496  EGPGGILIFLTGWDDISSLKEKLQIHPIFGNPDLVMLLACHGSMETFEQRLIFEEPASGV 555

Query: 622  RKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSXXXXXXXXX 681
            RKIVLATNIAETSITINDV FV+DCGKAKETSYDALNNTPCLLP+WISKVS         
Sbjct: 556  RKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAG 615

Query: 682  XVQPGECYHLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGSISEFLSRALQSPEI 741
             V+PG+CYHLYP+CVYDAFAEYQLPEILRTPL SLCLQIKSL LGSISEFLSRALQSPE+
Sbjct: 616  RVRPGQCYHLYPKCVYDAFAEYQLPEILRTPLHSLCLQIKSLNLGSISEFLSRALQSPEL 675

Query: 742  LAVQNAVEYLEIIGALDESENLTILGRYLAMLPMEPKLGKMLILGAIFSCLDPILTVVAG 801
            LAVQ A+ +L+IIGALDE+E+LT LGRYL+ LPMEPKLGKMLILGAI  CLDPILTV AG
Sbjct: 676  LAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGKMLILGAILGCLDPILTVAAG 735

Query: 802  LSVRDPFLAPMDKKDLADAAKSQFSGAYSDHLALLSAYEGWKDADIDLGGYEYCWKNFLS 861
            LSVRDPFL P DKKDLA+AAKSQFS  +SDHLAL+ AYEGWK A+ +   Y+YCWKNFLS
Sbjct: 736  LSVRDPFLTPQDKKDLAEAAKSQFSRDHSDHLALVRAYEGWKKAEEESAVYDYCWKNFLS 795

Query: 862  LQSMKAIDALRREFICLLKDIGLVDSNTASYNAWSYDVNLIRAVICFGLYPGICSIVHNE 921
            +QS++AID+LR+EF  LLKD GL+D N +  N+   D NL RAVIC+G+YPGICS+VHNE
Sbjct: 796  IQSLRAIDSLRKEFFSLLKDTGLIDGNPSICNSEGNDANLTRAVICYGMYPGICSVVHNE 855

Query: 922  KSFSLKTMEDGQVLLYSNSVNARETTIPSPWLVFNEKIKVNSVFLRDSTAVSDSVVLLFG 981
            +SFSLKTMEDGQVLLYSNS NARET IP PWLVFNEKIKVNSVFLRDSTA SDS ++LFG
Sbjct: 856  RSFSLKTMEDGQVLLYSNSENARETKIPYPWLVFNEKIKVNSVFLRDSTACSDSTLILFG 915

Query: 982  GNLSKGDADNHLKMLGGYLEFFMEPDVADMYLSIRRELDDFIQSKLLFPRMGMHLYHELL 1041
            G++SKGD D HLKMLGGYLEFFM+PDVA++Y ++++ELD+ IQ+KLL P++ M  + ELL
Sbjct: 916  GSISKGDTDGHLKMLGGYLEFFMKPDVAEIYQTLKKELDELIQNKLLNPKVDMQAHRELL 975

Query: 1042 SAVRLLISNDECEGRFVFGRPVLKTLKKSVMVSRPALFSRIESGPGGENSKSQLQTLLAR 1101
            SA+RLL+S D C+GRFVFG  +L+ L+ S + ++P+LFSR ESGPGG+NSKSQLQT+L R
Sbjct: 976  SAIRLLVSEDGCDGRFVFGHQILRPLEISALSTKPSLFSRTESGPGGDNSKSQLQTILTR 1035

Query: 1102 AGYAKPFYKTEQLMNSQFQATVEFNGMQIIGLPCNN 1137
            AGY  P YKT+QL N++FQ TVEFN  QI+G PC+N
Sbjct: 1036 AGYTVPMYKTKQLKNNKFQTTVEFNETQIMGQPCSN 1071


>AT1G48650.2 | Symbols:  | DEA(D/H)-box RNA helicase family protein |
            chr1:17989517-17995169 REVERSE LENGTH=1206
          Length = 1206

 Score = 1360 bits (3519), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 658/1055 (62%), Positives = 817/1055 (77%), Gaps = 13/1055 (1%)

Query: 85   AYDDVVSDDCFDREFQIPLPSSLPSDFPNDNIAEWKRKLSMLLNDKSKQEVISREKKDRH 144
            AY+D  S D  DR+        +      DNI +W+ KL+MLL +K  QEV+SRE+KDR 
Sbjct: 104  AYNDYESSDESDRDVGSSQSQQMAGS-TLDNIDQWRFKLTMLLRNKEDQEVVSRERKDRR 162

Query: 145  DFEQIAVLATEMGLYSHKYTKVVVFSKVPXXXXXXXXXXXXXXXEVSMPITLFRQVDAHF 204
            DF+ I+ LAT MGL+S +Y+K+VV SK P               EV +P  L  +VDAH 
Sbjct: 163  DFDHISALATRMGLHSRQYSKIVVISKAPLPNYRPDLDDKRPQREVVLPFGLQSEVDAHL 222

Query: 205  EEYLRQKSRVNKXXXXXXXXXXXXXXXVGTDEGLFEQPVLLASSKAVAEKVLLRRSLQMR 264
              +L QK  +                 +    G +E P  +  +    E++L  RSLQ++
Sbjct: 223  HSFLDQKKTL-----IPEMPRQNSSESLANGYGNYETPETVMQNSLARERILRPRSLQLK 277

Query: 265  NQQHAWQESPEGRRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFIL 324
            ++Q  W +SPEG++++ FR +LPAYKEK+A+L  ++ NQVV++SGETGCGKTTQ+PQ+IL
Sbjct: 278  SKQQQWVDSPEGQKMVGFRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYIL 337

Query: 325  ESEIEAVRGAACNIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHIL 384
            ESEIEA RGA C+IICTQPRRISA+SVSERVA+ERGE++GESVGYKVRLEG++GRDT +L
Sbjct: 338  ESEIEAARGATCSIICTQPRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLL 397

Query: 385  FCTTGILLRRLLADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSAT 444
            FCTTG+LLRRLL DR+L+GVTHV+VDEIHERGMNEDF           RP+LKLILMSAT
Sbjct: 398  FCTTGVLLRRLLVDRSLKGVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSAT 457

Query: 445  LDAELFSSYFNGAPIMNIPGFTYPVRTYFLENILEMTGYRLTPYNQIDDYGQERMWKMNK 504
            L+AELFSSYF GAP M+IPGFTYPVR +FLE+ LE +GYRLT YNQIDDYG+E+ WKM K
Sbjct: 458  LNAELFSSYFGGAPAMHIPGFTYPVRAHFLEDYLETSGYRLTTYNQIDDYGEEKTWKMQK 517

Query: 505  QAP-RKRKSQIASTVEDAIRAADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICENER 563
            QA  +KRKS I+S VEDA+ AADFK Y+ +T++SLSCW+PD IGF+LIE +LC+I + ER
Sbjct: 518  QAQFKKRKSLISSAVEDALEAADFKGYNFRTRDSLSCWSPDSIGFNLIENVLCHIVKGER 577

Query: 564  PGAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPEDGVRK 623
            PGAVLVFMTGWDDI+SLK +L  +++LGDPN+VLLLACHGSMASSEQRLIF+ P +G+RK
Sbjct: 578  PGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGIRK 637

Query: 624  IVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSXXXXXXXXXXV 683
            IVLATN+AETSITINDVV+V+DCGKAKETSYDALNNTPCLLP+WISK +          V
Sbjct: 638  IVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRV 697

Query: 684  QPGECYHLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGSISEFLSRALQSPEILA 743
             PGECYHLYPRCVY+AFA+YQ PE+LRTPLQSLCLQIKSL LGSISEFLSRALQ PE L+
Sbjct: 698  MPGECYHLYPRCVYEAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQPPEALS 757

Query: 744  VQNAVEYLEIIGALDESENLTILGRYLAMLPMEPKLGKMLILGAIFSCLDPILTVVAGLS 803
            VQNAVEYL+IIGALD+ ENLT LG+ L+MLP+EPKLGKMLILGAIF+CLDP++TVVAGLS
Sbjct: 758  VQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLS 817

Query: 804  VRDPFLAPMDKKDLADAAKSQFSGA-YSDHLALLSAYEGWKDADIDLGGYEYCWKNFLSL 862
            VRDPFL P DKKDLA+ A+S+FSG  YSDHL L+ AY GWKDA+    GY+YCWKNFLS 
Sbjct: 818  VRDPFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTHSGYDYCWKNFLSS 877

Query: 863  QSMKAIDALRREFICLLKDIGLVDSNTASYNAWSYDVNLIRAVICFGLYPGICSIVHNEK 922
            Q++KA+D++R++F  LLK+  L+D N    +  S+D +L+RA+IC G++PG+CS+V+ EK
Sbjct: 878  QTLKAMDSMRKQFFNLLKEASLID-NIEGCSKLSHDEHLVRAIICAGMFPGVCSVVNKEK 936

Query: 923  SFSLKTMEDGQVLLYSNSVNARETTIPSPWLVFNEKIKVNSVFLRDSTAVSDSVVLLFGG 982
            S +LKTMEDGQVLLYS+SVN     IP PWLVFN+K+KVNSVFLRDSTAVSDSV+LLFG 
Sbjct: 937  SITLKTMEDGQVLLYSSSVNGNVPMIPFPWLVFNDKVKVNSVFLRDSTAVSDSVLLLFGD 996

Query: 983  NLSKGDADNHLKMLGGYLEFFMEPDVADMYLSIRRELDDFIQSKLLFPRMGMHLYHELLS 1042
             +S G  D HLKMLGGYLEFFM+P +A  YLS++RELD+ IQ+KL+ P++ + LY +L++
Sbjct: 997  KISSGGFDGHLKMLGGYLEFFMKPTLAYTYLSLKRELDELIQNKLVNPKLDIQLYDKLMT 1056

Query: 1043 AVRLLISNDECEGRFVFGRPVLKTLKKSVMVSRPALFSRIESGPGGENSKSQLQTLLARA 1102
            A+RLL+S D+CEGRFV+GR  L       +    A         GGEN+K+QLQTLLARA
Sbjct: 1057 AIRLLVSEDQCEGRFVYGRKALSPTPAKKLKDVGAQL----QNSGGENNKNQLQTLLARA 1112

Query: 1103 GYAKPFYKTEQLMNSQFQATVEFNGMQIIGLPCNN 1137
            G+  P YKT QL N+QF++ V FNG+  +G PC +
Sbjct: 1113 GHGSPVYKTRQLKNNQFRSMVTFNGLDFMGKPCGS 1147


>AT1G48650.1 | Symbols:  | DEA(D/H)-box RNA helicase family protein |
            chr1:17989670-17995169 REVERSE LENGTH=1197
          Length = 1197

 Score = 1360 bits (3519), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 658/1055 (62%), Positives = 817/1055 (77%), Gaps = 13/1055 (1%)

Query: 85   AYDDVVSDDCFDREFQIPLPSSLPSDFPNDNIAEWKRKLSMLLNDKSKQEVISREKKDRH 144
            AY+D  S D  DR+        +      DNI +W+ KL+MLL +K  QEV+SRE+KDR 
Sbjct: 104  AYNDYESSDESDRDVGSSQSQQMAGS-TLDNIDQWRFKLTMLLRNKEDQEVVSRERKDRR 162

Query: 145  DFEQIAVLATEMGLYSHKYTKVVVFSKVPXXXXXXXXXXXXXXXEVSMPITLFRQVDAHF 204
            DF+ I+ LAT MGL+S +Y+K+VV SK P               EV +P  L  +VDAH 
Sbjct: 163  DFDHISALATRMGLHSRQYSKIVVISKAPLPNYRPDLDDKRPQREVVLPFGLQSEVDAHL 222

Query: 205  EEYLRQKSRVNKXXXXXXXXXXXXXXXVGTDEGLFEQPVLLASSKAVAEKVLLRRSLQMR 264
              +L QK  +                 +    G +E P  +  +    E++L  RSLQ++
Sbjct: 223  HSFLDQKKTL-----IPEMPRQNSSESLANGYGNYETPETVMQNSLARERILRPRSLQLK 277

Query: 265  NQQHAWQESPEGRRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFIL 324
            ++Q  W +SPEG++++ FR +LPAYKEK+A+L  ++ NQVV++SGETGCGKTTQ+PQ+IL
Sbjct: 278  SKQQQWVDSPEGQKMVGFRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYIL 337

Query: 325  ESEIEAVRGAACNIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHIL 384
            ESEIEA RGA C+IICTQPRRISA+SVSERVA+ERGE++GESVGYKVRLEG++GRDT +L
Sbjct: 338  ESEIEAARGATCSIICTQPRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLL 397

Query: 385  FCTTGILLRRLLADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSAT 444
            FCTTG+LLRRLL DR+L+GVTHV+VDEIHERGMNEDF           RP+LKLILMSAT
Sbjct: 398  FCTTGVLLRRLLVDRSLKGVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSAT 457

Query: 445  LDAELFSSYFNGAPIMNIPGFTYPVRTYFLENILEMTGYRLTPYNQIDDYGQERMWKMNK 504
            L+AELFSSYF GAP M+IPGFTYPVR +FLE+ LE +GYRLT YNQIDDYG+E+ WKM K
Sbjct: 458  LNAELFSSYFGGAPAMHIPGFTYPVRAHFLEDYLETSGYRLTTYNQIDDYGEEKTWKMQK 517

Query: 505  QAP-RKRKSQIASTVEDAIRAADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICENER 563
            QA  +KRKS I+S VEDA+ AADFK Y+ +T++SLSCW+PD IGF+LIE +LC+I + ER
Sbjct: 518  QAQFKKRKSLISSAVEDALEAADFKGYNFRTRDSLSCWSPDSIGFNLIENVLCHIVKGER 577

Query: 564  PGAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPEDGVRK 623
            PGAVLVFMTGWDDI+SLK +L  +++LGDPN+VLLLACHGSMASSEQRLIF+ P +G+RK
Sbjct: 578  PGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGIRK 637

Query: 624  IVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSXXXXXXXXXXV 683
            IVLATN+AETSITINDVV+V+DCGKAKETSYDALNNTPCLLP+WISK +          V
Sbjct: 638  IVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRV 697

Query: 684  QPGECYHLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGSISEFLSRALQSPEILA 743
             PGECYHLYPRCVY+AFA+YQ PE+LRTPLQSLCLQIKSL LGSISEFLSRALQ PE L+
Sbjct: 698  MPGECYHLYPRCVYEAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQPPEALS 757

Query: 744  VQNAVEYLEIIGALDESENLTILGRYLAMLPMEPKLGKMLILGAIFSCLDPILTVVAGLS 803
            VQNAVEYL+IIGALD+ ENLT LG+ L+MLP+EPKLGKMLILGAIF+CLDP++TVVAGLS
Sbjct: 758  VQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLS 817

Query: 804  VRDPFLAPMDKKDLADAAKSQFSGA-YSDHLALLSAYEGWKDADIDLGGYEYCWKNFLSL 862
            VRDPFL P DKKDLA+ A+S+FSG  YSDHL L+ AY GWKDA+    GY+YCWKNFLS 
Sbjct: 818  VRDPFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTHSGYDYCWKNFLSS 877

Query: 863  QSMKAIDALRREFICLLKDIGLVDSNTASYNAWSYDVNLIRAVICFGLYPGICSIVHNEK 922
            Q++KA+D++R++F  LLK+  L+D N    +  S+D +L+RA+IC G++PG+CS+V+ EK
Sbjct: 878  QTLKAMDSMRKQFFNLLKEASLID-NIEGCSKLSHDEHLVRAIICAGMFPGVCSVVNKEK 936

Query: 923  SFSLKTMEDGQVLLYSNSVNARETTIPSPWLVFNEKIKVNSVFLRDSTAVSDSVVLLFGG 982
            S +LKTMEDGQVLLYS+SVN     IP PWLVFN+K+KVNSVFLRDSTAVSDSV+LLFG 
Sbjct: 937  SITLKTMEDGQVLLYSSSVNGNVPMIPFPWLVFNDKVKVNSVFLRDSTAVSDSVLLLFGD 996

Query: 983  NLSKGDADNHLKMLGGYLEFFMEPDVADMYLSIRRELDDFIQSKLLFPRMGMHLYHELLS 1042
             +S G  D HLKMLGGYLEFFM+P +A  YLS++RELD+ IQ+KL+ P++ + LY +L++
Sbjct: 997  KISSGGFDGHLKMLGGYLEFFMKPTLAYTYLSLKRELDELIQNKLVNPKLDIQLYDKLMT 1056

Query: 1043 AVRLLISNDECEGRFVFGRPVLKTLKKSVMVSRPALFSRIESGPGGENSKSQLQTLLARA 1102
            A+RLL+S D+CEGRFV+GR  L       +    A         GGEN+K+QLQTLLARA
Sbjct: 1057 AIRLLVSEDQCEGRFVYGRKALSPTPAKKLKDVGAQL----QNSGGENNKNQLQTLLARA 1112

Query: 1103 GYAKPFYKTEQLMNSQFQATVEFNGMQIIGLPCNN 1137
            G+  P YKT QL N+QF++ V FNG+  +G PC +
Sbjct: 1113 GHGSPVYKTRQLKNNQFRSMVTFNGLDFMGKPCGS 1147


>AT5G04895.1 | Symbols:  | DEA(D/H)-box RNA helicase family protein |
            chr5:1428796-1434516 FORWARD LENGTH=1161
          Length = 1161

 Score = 1252 bits (3239), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1061 (58%), Positives = 795/1061 (74%), Gaps = 22/1061 (2%)

Query: 81   RFVSAYDDVVSDDCFDREFQIPLPSSLPSDFPNDNIAEWKRKLSMLLNDKSKQEVISREK 140
            RF+    +  SDD ++ EF+    SS  +     N+ EWK KL +LL + S+QE++SR+K
Sbjct: 64   RFIGHTAEQFSDDEYECEFEEHKASSSVA-----NVDEWKWKLGILLANDSEQEIVSRDK 118

Query: 141  KDRHDFEQIAVLATEMGLYSHKYTKVVVFSKVPXXXXXXXXXXXXXXXEVSMPITLFRQV 200
            +DR D+EQI+ LA  MGLYS  Y KVVV SKVP               EV +P++L R+V
Sbjct: 119  RDRRDYEQISNLAKRMGLYSEIYGKVVVASKVPLPNYRPDLDDKRPQREVVLPLSLQRRV 178

Query: 201  DAHFEEYL-RQKSRVNKXXXXXXXXXXXXXXXVGTDEGLFEQPVLLASSKAVAEKVLLRR 259
            +   +E+L  Q+    K                  DE        L  S  V EKVL RR
Sbjct: 179  EGLLQEHLDSQQLSSGKANECVADSQPPKQTEELPDEN---SDSFLDGS--VMEKVLQRR 233

Query: 260  SLQMRNQQHAWQESPEGRRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQI 319
            S++MRN Q  WQESPEGR +LEFR +LP++K+KE +L  ++RNQV+++SGETGCGKTTQ+
Sbjct: 234  SMRMRNMQRTWQESPEGRTMLEFRKTLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQL 293

Query: 320  PQFILESEIEAVRGAACNIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGR 379
            PQ+ILESEIE+ RGA CNIICTQPRRISAM+VSERV++ERGE LGE+VG+KVRLEG++G+
Sbjct: 294  PQYILESEIESGRGAFCNIICTQPRRISAMAVSERVSAERGEPLGETVGFKVRLEGMRGK 353

Query: 380  DTHILFCTTGILLRRLLADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLI 439
            +TH+LFCT+GILLRRLL+DRNL GVTHV VDEIHERGMNEDF           RP+L+L+
Sbjct: 354  NTHLLFCTSGILLRRLLSDRNLNGVTHVFVDEIHERGMNEDFLIIVLKELLPRRPDLRLV 413

Query: 440  LMSATLDAELFSSYFNGAPIMNIPGFTYPVRTYFLENILEMTGYRLTPYNQIDDYGQERM 499
            LMSATL+AELFS+Y+ GAP ++IPGFT+PV+ +FLE++LE+TGY+LT +NQ+DDYGQE+ 
Sbjct: 414  LMSATLNAELFSNYYGGAPTIHIPGFTHPVKAHFLEDVLEITGYKLTSFNQVDDYGQEKT 473

Query: 500  WKMNKQ-APRKRKSQIASTVEDAIRAADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNI 558
            WK  KQ  PRKRK+QI + VE+A+  ++F+ Y+ +T++SLS W PDCIGF+LIE +LC+I
Sbjct: 474  WKTQKQLMPRKRKNQITTLVEEALSKSNFESYNSRTRDSLSSWMPDCIGFNLIEAVLCHI 533

Query: 559  CENERPGAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPE 618
            C  ERPGAVLVF+TGWDDI SL +++  + +LGDPNRVLLL CHGSMA++EQRLIFE   
Sbjct: 534  CRKERPGAVLVFLTGWDDIRSLSDQIKAHPLLGDPNRVLLLMCHGSMATAEQRLIFERAP 593

Query: 619  DGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSXXXXXX 678
              +RKIVLATN+AE SITINDVVFV+DCGKAKET+YDALNNTPCLLP+WIS+ S      
Sbjct: 594  PNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRG 653

Query: 679  XXXXVQPGECYHLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGSISEFLSRALQS 738
                + PGECYHLYP+CVYDAFAEYQLPE+LRTPL SLCLQIKSL++ SI+EFLS ALQ+
Sbjct: 654  RAGRLFPGECYHLYPKCVYDAFAEYQLPELLRTPLNSLCLQIKSLQVESIAEFLSAALQA 713

Query: 739  PEILAVQNAVEYLEIIGALDESENLTILGRYLAMLPMEPKLGKMLILGAIFSCLDPILTV 798
            PE LAVQNA+ +L++IGALDE ENLT LG+ L++LP++PKLGKMLI+GAIF C DPILT+
Sbjct: 714  PESLAVQNAIGFLKMIGALDEKENLTDLGKLLSILPVDPKLGKMLIMGAIFRCFDPILTI 773

Query: 799  VAGLSVRDPFLAPMDKKDLADAAKSQFSGA-YSDHLALLSAYEGWKDADIDLGGYEYCWK 857
            V+GLSVRDPFL P DKKDLA +AK +FS   YSDH+AL+ A+EGWKDA+ +   YE+CW+
Sbjct: 774  VSGLSVRDPFLLPQDKKDLALSAKLRFSAKDYSDHMALVRAFEGWKDAEREGSAYEFCWR 833

Query: 858  NFLSLQSMKAIDALRREFICLLKDIGLVDSNTASYNAWSYDVNLIRAVICFGLYPGICSI 917
            NFLS Q+++AI +LR++F  +LK+ GLV  + A  N  S++ +L+RAVIC GL+PGI S+
Sbjct: 834  NFLSAQTLQAIHSLRKQFNYILKEAGLVHDDLALNNKLSHNQSLVRAVICSGLFPGIASV 893

Query: 918  VHNEKSFSLKTMEDGQVLLYSNSVNARETTIPSPWLVFNEKIKVNSVFLRDSTAVSDSVV 977
            VH E S S KTM+DGQV LY+NSVN+R  TIP PWLVF EK+KVN+V +RDST V DS +
Sbjct: 894  VHRETSMSFKTMDDGQVSLYANSVNSRFPTIPYPWLVFGEKVKVNAVLIRDSTGVPDSSL 953

Query: 978  LLFGGNLSKGDADNHLKMLGGYLEFFMEPDVADMYLSIRRELDDFIQSKLLFPRMGMHLY 1037
            +LFGG+LS G    HLKML GY++FFM+P++A+ Y+ ++ ELD  +Q KL  P M +H  
Sbjct: 954  ILFGGSLSTGVQVGHLKMLDGYIDFFMDPNLAESYVKLKEELDKLLQKKLEDPSMDIHKE 1013

Query: 1038 HE-LLSAVRLLISNDECEGRFVFGRPVLKTLKKSVMVSRPALFSRIESGPGGENSKSQLQ 1096
             + L+ AV+ L++ D+CEGRFVFGR   +        S+P +     S   G N KS LQ
Sbjct: 1014 GKYLMLAVQELVAGDQCEGRFVFGRDTKRP-------SQPQIGENKHS-KDGTNPKSLLQ 1065

Query: 1097 TLLARAGYAKPFYKTEQLMNSQFQATVEFNGMQIIGLPCNN 1137
            TLL RAG++ P YKT+ L  ++F+A VEF GMQ +G P  N
Sbjct: 1066 TLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQFVGKPQRN 1106


>AT2G35920.1 | Symbols:  | RNA helicase family protein |
            chr2:15075674-15080506 FORWARD LENGTH=995
          Length = 995

 Score =  794 bits (2051), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/923 (44%), Positives = 581/923 (62%), Gaps = 19/923 (2%)

Query: 118  EWKRKLSMLLNDKSKQEVISREKKDRHDFEQIAVLATEMGLYSHKYTK--VVVFSKVPX- 174
            EW  K+        +QE++ +    R D + ++ +A +MGLY H Y K   +V SKVP  
Sbjct: 66   EWWNKIEQW-KTGGEQEMLIKRNFSRGDQQTLSDMALQMGLYFHAYNKGKALVVSKVPLP 124

Query: 175  -XXXXXXXXXXXXXXEVSMPITLFRQVDAHFEEYLRQKSRVNKXXXXXXXXXXXXXXXVG 233
                           E+ M     R++ +  +      S                   + 
Sbjct: 125  DYRADLDERHGSTQKEIKMSTETERKLGSLLKTTQESGSSGASASAFNDQQDRTSTLGLK 184

Query: 234  TDEGLFEQPVLLASSKAVAEKVLLRRSLQMRNQQHAWQESPEGRRILEFRSSLPAYKEKE 293
              +   + P  L   K          S  ++ +Q   + +   + +  FR  LPA+K KE
Sbjct: 185  RPDSASKLPDSLEKEKF---------SFALKERQEKLKATESVKALKAFREKLPAFKMKE 235

Query: 294  AILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNIICTQPRRISAMSVSE 353
              L+ +S+NQV+++SGETGCGKTTQ+PQFILE EI ++RGA CNIICTQPRRISA+SV+ 
Sbjct: 236  EFLNSVSQNQVLVVSGETGCGKTTQLPQFILEEEISSLRGADCNIICTQPRRISAISVAS 295

Query: 354  RVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLADRNLEGVTHVIVDEIH 413
            R+++ERGE +GESVGY++RLE  +   T +LFCTTG+LLRRL+ D NL  V+H++VDEIH
Sbjct: 296  RISAERGESIGESVGYQIRLESKRSDQTRLLFCTTGVLLRRLIEDPNLTNVSHLLVDEIH 355

Query: 414  ERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFNGAPIMNIPGFTYPVRTYF 473
            ERGMNEDF           RP+L+LILMSAT++A++FS+YF  +P M+IPGFT+PV   F
Sbjct: 356  ERGMNEDFLLIILRDLLPRRPDLRLILMSATINADMFSTYFGNSPTMHIPGFTFPVAELF 415

Query: 474  LENILEMTGYRLTPYNQIDDYGQERMWKMNKQAPRKRKSQIASTVEDAIRAADFKDYSPQ 533
            LE++LE + Y +   +  +  G  R  +   ++   +K  + +  ED    + +K YS  
Sbjct: 416  LEDVLEKSRYNIKSSDSGNYQGSSRGRRRESES---KKDDLTTLFEDIDINSHYKSYSSA 472

Query: 534  TQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKLLRNNVLGDP 593
            T+ SL  W+   I   L+E  + +IC  E  GA+LVF+TGWD+IS L EK+  NN LGD 
Sbjct: 473  TRNSLEAWSGAQIDVDLVEATIEHICRLEGGGAILVFLTGWDEISKLLEKINMNNFLGDS 532

Query: 594  NRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETS 653
            ++ L+L  HGSM +  QR IF+ P    RKIVLATNIAE+SITI+DVV+V+DCGKAKETS
Sbjct: 533  SKFLVLPLHGSMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETS 592

Query: 654  YDALNNTPCLLPTWISKVSXXXXXXXXXXVQPGECYHLYPRCVYDAFAEYQLPEILRTPL 713
            YDALN   CLLP+WISK S          VQ G CY LYP+ +YDAF +YQLPEI+RTPL
Sbjct: 593  YDALNKVACLLPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIYDAFPQYQLPEIIRTPL 652

Query: 714  QSLCLQIKSLRLGSISEFLSRALQSPEILAVQNAVEYLEIIGALDESENLTILGRYLAML 773
            Q LCL IKSL++GSI  FL++ALQ P+ LAV+NA+E L+ IGAL++ E LT LGR+L  L
Sbjct: 653  QELCLHIKSLQVGSIGSFLAKALQPPDALAVENAIELLKTIGALNDVEELTPLGRHLCTL 712

Query: 774  PMEPKLGKMLILGAIFSCLDPILTVVAGLSVRDPFLAPMDKKDLADAAKSQFSG-AYSDH 832
            P++P +GKML++GAIF C++P LT+ A L+ R PF+ P+++K+ AD AK  F+G + SDH
Sbjct: 713  PVDPNIGKMLLIGAIFQCVNPALTIAAALAYRSPFVLPLNRKEEADEAKRYFAGDSCSDH 772

Query: 833  LALLSAYEGWKDADIDLGGYEYCWKNFLSLQSMKAIDALRREFICLLKDIGLVD-SNTAS 891
            +ALL AYEG++DA       ++CW+NFLS  +++ ++ +R +F+ LL DIG VD S   +
Sbjct: 773  IALLKAYEGYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLSDIGFVDKSKPNA 832

Query: 892  YNAWSYDVNLIRAVICFGLYPGICSIVHNEKSFSLKTMEDGQVLLYSNSVNARETTIPSP 951
            YN +SYD+ +I AV+C GLYP +       K  +  T E G+V ++  SVNAR      P
Sbjct: 833  YNQYSYDMEMISAVLCAGLYPNVVQCKRRGKRTAFYTKELGKVDIHPGSVNARVNLFSLP 892

Query: 952  WLVFNEKIKVNSVFLRDSTAVSDSVVLLFGGNLSKGDADNHLKMLGGYLEFFMEPDVADM 1011
            +LV++EK+K  SV++RDST +SD  +L+FGGNL        ++MLGGYL F    ++ ++
Sbjct: 893  YLVYSEKVKTTSVYIRDSTNISDYALLMFGGNLIPSKTGEGIEMLGGYLHFSASKNILEL 952

Query: 1012 YLSIRRELDDFIQSKLLFPRMGM 1034
               +R E+D  +  K+  P + +
Sbjct: 953  IQRLRGEVDKLLNKKIEDPSLDI 975


>AT1G58060.1 | Symbols:  | RNA helicase family protein |
            chr1:21489480-21501775 REVERSE LENGTH=1459
          Length = 1459

 Score =  514 bits (1325), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 320/884 (36%), Positives = 484/884 (54%), Gaps = 81/884 (9%)

Query: 243  VLLASSKAVAEKVLLRRSLQMRNQQHAWQESPEGRRILEFRSSLPAYKEKEAILSILSRN 302
            V+ ++++A  +  +    L ++ +Q   + + + + +L+ R++LP  + K  IL  L   
Sbjct: 571  VVKSNNRAKRDSYIEAECLSLQRKQENKKRTQKYKDMLKTRTALPISEVKNGILQHLKEK 630

Query: 303  QVVIISGETGCGKTTQIPQFILESEIEAVRGAACNIICTQPRRISAMSVSERVASERGEK 362
             V+++ GETG GKTTQ+PQFIL+  I++  G  CNIICTQPRRI+A+SV++RVA ER E 
Sbjct: 631  DVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPRRIAAISVAQRVADERCES 690

Query: 363  ---LGES-VGYKVRLEGVKGRDTHILFCTTGILLRRLLADRNLEGVTHVIVDEIHERGMN 418
               L +S VGY+VRLE  +   T +LFCTTGILLR+L  DR L  VTH+IVDE+HER + 
Sbjct: 691  SPGLDDSLVGYQVRLESARSDKTRLLFCTTGILLRKLAGDRTLNDVTHIIVDEVHERSLL 750

Query: 419  EDFXXXXXXXXXXHRP------ELKLILMSATLDAELFSSYFNGAPIMNIPGFTYPVRTY 472
             DF           +       +LK+ILMSAT+DA+LFS YF   P++   G T+PV T+
Sbjct: 751  GDFLLIILKSLIEKQSCDNTSRKLKVILMSATVDADLFSRYFGHCPVITAQGRTHPVTTH 810

Query: 473  FLENILEMTGYRLTPYN----QIDDYGQERMWKMNKQAPRKRKSQIAST-------VEDA 521
            FLE I E   Y L P +    + D   ++++  +N +  R +K+ + +         ED 
Sbjct: 811  FLEEIYESINYLLAPDSPAALRSDTSIKDKLGSVNDR--RGKKNLVLAGWGDDYLLSEDC 868

Query: 522  IR----AADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDI 577
            +     ++++  YS QTQ++L   N D I + L+E ++C+I +    GA+L+F+ G  +I
Sbjct: 869  LNPFYVSSNYNSYSDQTQQNLKRLNEDRIDYELLEELICHIDDTCEEGAILIFLPGVAEI 928

Query: 578  SSLKEKLLRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITI 637
              L + L  +     P    LL  H S+ASSEQR +F  P  G+RK++ ATNIAETSITI
Sbjct: 929  YMLLDMLAASYRFRGPAADWLLPLHSSIASSEQRKVFLRPPKGLRKVIAATNIAETSITI 988

Query: 638  NDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSXXXXXXXXXXVQPGECYHLYPRCVY 697
            +DVV+V+D GK KE  Y+       ++  WIS+ +          V+PG C+ LY R  +
Sbjct: 989  DDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQANARQRTGRAGRVKPGICFSLYTRYRF 1048

Query: 698  DAFAE-YQLPEILRTPLQSLCLQIKSLRLGSISEFLSRALQSPEILAVQNAVEYLEIIGA 756
            +     YQ+PE+LR PL  LCLQIK L LG I  FLSRAL+ P   A+ +A+  L  +GA
Sbjct: 1049 EKLMRPYQVPEMLRMPLVELCLQIKLLGLGHIKPFLSRALEPPSEGAMTSAISLLHEVGA 1108

Query: 757  LDESENLTILGRYLAMLPMEPKLGKMLILGAIFSCLDPILTVVAGLSVRDPFLAPMDKKD 816
            ++  E LT LG +LA LP++  +GKML+ G IF CL PIL++ A LS + PF+ P D+K 
Sbjct: 1109 VEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILSIAAFLSYKSPFIYPKDEKQ 1168

Query: 817  LADAAKSQF-------------SGAYSDHLALLSAYEGWKDADIDLG---GYEYCWKNFL 860
              D  K                +   SDHL ++ AY+ W     + G      +C   FL
Sbjct: 1169 NVDRVKLALLSDNGVSSSDLNNNDRQSDHLLMMVAYDKWVKILQERGMKAAQRFCESKFL 1228

Query: 861  SLQSMKAIDALRREFICLLKDIGLVD--------------------SNTASYNAWSYDVN 900
            S   M+ I  +R +F  LL DIGL++                      T  +N +S    
Sbjct: 1229 SSSVMRMIRDMRVQFGTLLADIGLINLPKTGEFSGRKKENLDVWFSDPTQPFNMYSQQPE 1288

Query: 901  LIRAVICFGLYPGICSIVH--NEKSFSLKTMEDGQVLLYS-------------NSVNARE 945
            +++A++C GLYP I +      E +F+  T +  Q   YS             +S+N+  
Sbjct: 1289 VVKAILCAGLYPNIAANDKGITETTFNSLTKQGNQTKSYSAWYDGRREVHIHPSSINSNF 1348

Query: 946  TTIPSPWLVFNEKIKVNSVFLRDSTAVSDSVVLLFGGNLSKGDADNHLKMLGGYLEFFME 1005
                +P+LVF EK++ N V+LRD+T VS   +LLFGG+++       +  + G+L+    
Sbjct: 1349 KAFQNPFLVFLEKVETNKVYLRDTTIVSPFSILLFGGSINVHHQSGSV-TIDGWLKVAAP 1407

Query: 1006 PDVADMYLSIRRELDDFIQSKLLFPRMGMHLYHELL-SAVRLLI 1048
               A ++  +R  L   ++  +  P     +++E++ S V LLI
Sbjct: 1408 AQTAVLFKELRLTLHSILKDLIRKPEKSGIVHNEVVKSMVHLLI 1451


>AT1G58050.1 | Symbols:  | RNA helicase family protein |
            chr1:21478590-21487839 REVERSE LENGTH=1417
          Length = 1417

 Score =  465 bits (1197), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 296/844 (35%), Positives = 459/844 (54%), Gaps = 66/844 (7%)

Query: 263  MRNQQHAWQESPEGRRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQF 322
            ++ +Q   ++  + + +L+ R++LP  + K+ IL  L    V+++ GETG GKTTQ+PQF
Sbjct: 574  LKQKQENKKKMQKYKDMLKTRAALPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVPQF 633

Query: 323  ILESEIEAVRGAACNIICTQPRRISAMSVSERVASERGEKL----GESVGYKVRLEGVKG 378
            IL+  I++  G  CNIICTQPR   A++V++RVA ER E         V Y+VR +  + 
Sbjct: 634  ILDDMIDSGHGGYCNIICTQPR---AITVAQRVADERCEPPPGFDNSVVAYQVRHQNARS 690

Query: 379  RDTHILFCTTGILLRRLLADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHR----- 433
              T +LFCTTGILLR+L+ D  L+ VTH+IVDE+HER +  DF           +     
Sbjct: 691  DKTRLLFCTTGILLRKLVGDTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNA 750

Query: 434  -PELKLILMSATLDAELFSSYFNGAPIMNIPGFTYPVRTYFLENILEMTGYRL---TPYN 489
             P+LK+ILMSAT+DA  FS YF   PI+   G T+PV TYFLE+I E T Y L   +P  
Sbjct: 751  LPKLKVILMSATVDAHQFSRYFGQCPIITAQGRTHPVTTYFLEDIYERTKYLLASDSPAA 810

Query: 490  QIDDYG-QERMWKMNKQAPRKRKSQIASTVEDAIRAADFKDYSPQTQESLSCWNPDCIGF 548
               D    +++  +N   PR +K+ + +   D+   ++  D    + +S+       + +
Sbjct: 811  LSSDTSITDKLGSVN--VPRGKKNLMLAGWGDSYLVSE--DSLNTSYDSIKYIASAVVDY 866

Query: 549  SLIEYILCNICENERPGAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVLLLACHGSMASS 608
             L+E ++C+I +    GA+LVF+ G  +I+ L  +L  +      +   LL  H S+AS+
Sbjct: 867  DLLEELICHIDDTCEEGAILVFLPGMSEINMLLNRLAASYRFRGASGDWLLPLHSSIAST 926

Query: 609  EQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWI 668
            EQ+ +F  P  G+RK+++ATNIAETSITI DVV+V+D GK KE  Y+       ++  W+
Sbjct: 927  EQKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWV 986

Query: 669  SKVSXXXXXXXXXXVQPGECYHLYPRCVYDAFAE-YQLPEILRTPLQSLCLQIKSLRLGS 727
            SK +          V+PG C+ LY R  ++     YQ+PE+LR PL  LCL IK L LG 
Sbjct: 987  SKANARQRMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLHIKLLGLGQ 1046

Query: 728  ISEFLSRALQSPEILAVQNAVEYLEIIGALDESENLTILGRYLAMLPMEPKLGKMLILGA 787
            I  FLS+AL+ P   A+ +A+  L  +GAL+  E LT LG +LA LP++  +GKML+ G 
Sbjct: 1047 IKPFLSKALEPPSESAINSAILLLHKVGALEGDEELTPLGHHLAKLPVDLLIGKMLLYGG 1106

Query: 788  IFSCLDPILTVVAGLS-VRDPFLAPMDKKD--------LADAAKSQF----SGAYSDHLA 834
            IF CL PIL++ A LS  + PF+   D+++        L+D  +S      +   SDHL 
Sbjct: 1107 IFGCLSPILSIAAFLSCCKSPFVYAKDEQNVDRVKLALLSDKLESSSNLNNNDRQSDHLL 1166

Query: 835  LLSAYEGWKDADIDLG---GYEYCWKNFLSLQSMKAIDALRREFICLLKDIGLVD----- 886
            ++ AYE W     + G      +C   FL+   M+ +   R EF  LL DIGL++     
Sbjct: 1167 MVVAYEKWVRILHEQGFKAAESFCESKFLNSSVMRMMRERRVEFGMLLADIGLINLPKGK 1226

Query: 887  ------------SNTASYNAWSYDVNLIRAVICFGLYPGICSIVHN------EKSFSLKT 928
                          T  +N +S +  +++A++C GL P I   + N      E++     
Sbjct: 1227 GRRKENFDVWFSDKTQPFNMYSQEPEVVKAILCAGLCPNIAEGLVNRLTKPAEETQRYAV 1286

Query: 929  MEDG--QVLLYSNSVNARETTIPSPWLVFNEKIKVNS-VFLRDSTAVSDSVVLLFGGNLS 985
              DG  +V ++ NS+N        P++VF EK++    V+L+D+T VS   +LLFGG+++
Sbjct: 1287 WHDGKREVHIHRNSINKNCKAFQYPFIVFLEKLETKKVVYLQDTTVVSPFSILLFGGSIN 1346

Query: 986  KGDADNHLKMLGGYLEFFMEPDVADMYLSIRRELDDFIQSKLLFPRMGMHLYHELL-SAV 1044
                   +  + G+L+       A ++  +R  L   ++  +  P     +++E++ S V
Sbjct: 1347 VHHQSGSV-TIDGWLKLTAPAQTAVLFKELRLTLHSILKDLIRKPEKSGIVHNEVVKSMV 1405

Query: 1045 RLLI 1048
             LLI
Sbjct: 1406 HLLI 1409


>AT2G47250.1 | Symbols:  | RNA helicase family protein |
           chr2:19399923-19402981 REVERSE LENGTH=729
          Length = 729

 Score =  337 bits (864), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 232/708 (32%), Positives = 369/708 (52%), Gaps = 95/708 (13%)

Query: 279 ILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEI--EAVRGAAC 336
           ILE R  LP + +K+  L+ L+ NQ +I+ GETG GKTTQIPQF+L++ +   + +G   
Sbjct: 58  ILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKW 117

Query: 337 NIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLL 396
            + CTQPRR++AMSVS RVA E    +GE VGY +R E      T + + T G+LLR  +
Sbjct: 118 LVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAM 177

Query: 397 ADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFNG 456
           AD  LE    +I+DE HER +  D           +RP+LKL++MSATL+AE F  YF+G
Sbjct: 178 ADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSG 237

Query: 457 APIMNIPGFTYPVRTYFLENILEMTGYRLTPYNQIDDYGQERMWKMNKQAPRKRKSQIAS 516
           AP+M +PG  +PV  +                     Y QE         P +       
Sbjct: 238 APLMKVPGRLHPVEIF---------------------YTQE---------PER------D 261

Query: 517 TVEDAIRAADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDD 576
            +E AIR                         ++++  +C     E PG +LVF+TG ++
Sbjct: 262 YLEAAIR-------------------------TVVQIHMC-----EPPGDILVFLTGEEE 291

Query: 577 ISSLKEKLLRN-NVLGDP-NRVLLLACHGSMASSEQRLIFE-------EPEDGVRKIVLA 627
           I     K+ +  + LGD    V ++  + ++  + Q+ IF+       E     RKIV++
Sbjct: 292 IEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVS 351

Query: 628 TNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSXXXXXXXXXXVQPGE 687
           TNIAETS+TI+ +V+V+D G AK+  Y+       LL + ISK S           +PG+
Sbjct: 352 TNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGK 411

Query: 688 CYHLYPRCVYDAFAEYQ-LPEILRTPLQSLCLQIKSLRLGSISEFLSRALQSPEILAVQN 746
           C+ LY    ++   + Q  PEILR+ L +  L +K L +  +  F      +PE L    
Sbjct: 412 CFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETL--MR 469

Query: 747 AVEYLEIIGALDESENLTILGRYLAMLPMEPKLGKMLILGAIFSCLDPILTVVAGLSVRD 806
           A+E L  +GALD+  NLT  G  ++  P++P++ KMLI+   F+C + IL+V A LSV +
Sbjct: 470 ALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPN 529

Query: 807 PFLAPMDKKDLADAAKSQFSGAYSDHLALLSAYEGWKDADIDLGGYEYCWKNFLSLQSMK 866
            F+ P + +  AD AK++F     DHL LL+ Y  +K  + D     +C++NF++ ++MK
Sbjct: 530 CFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPN---WCFENFVNNRAMK 586

Query: 867 AIDALRREFICLLKDIGLVDSNTASYNAWSYDVNLIRAVICFGLYPGICSIVHNEKSFSL 926
           + D +R++ + ++    L   +T  +N+  Y VN+ +A++  G +     + H E++   
Sbjct: 587 SADNVRQQLVRIMSRFNLKMCST-DFNSRDYYVNIRKAMLA-GYF---MQVAHLERTGHY 641

Query: 927 KTMEDGQV--LLYSNSVNARETTIPSPWLVFNEKIKVNSVFLRDSTAV 972
            T++D QV  L  SN ++ +       W+++NE +     F+R  T +
Sbjct: 642 LTVKDNQVVHLHPSNCLDHK-----PEWVIYNEYVLTTRNFIRTVTDI 684


>AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein |
            chr5:4122747-4128660 FORWARD LENGTH=1255
          Length = 1255

 Score =  314 bits (805), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 204/644 (31%), Positives = 326/644 (50%), Gaps = 92/644 (14%)

Query: 277  RRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAAC 336
            + + E R  LP +  ++ +L ++  NQV+++ GETG GKTTQ+ Q++ E       G   
Sbjct: 549  KTMAEQRQYLPIFSVRDELLQVIRENQVIVVVGETGSGKTTQLTQYLHED------GYTI 602

Query: 337  NII--CTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRR 394
            N I  CTQPRR++AMSV++RV+ E   +LG+ +GY +R E V G +T I + T G+LLR 
Sbjct: 603  NGIVGCTQPRRVAAMSVAKRVSEEMETELGDKIGYAIRFEDVTGPNTVIKYMTDGVLLRE 662

Query: 395  LLADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYF 454
             L D +L+    V++DE HER +N D            R + KLI+ SATL+A+ FS++F
Sbjct: 663  TLKDSDLDKYRVVVMDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSNFF 722

Query: 455  NGAPIMNIPGFTYPVRTYFLENILEMTGYRLTPYNQIDDYGQERMWKMNKQAPRKRKSQI 514
               PI NIPG T+PV      NIL    Y  TP    +DY                    
Sbjct: 723  GSVPIFNIPGRTFPV------NIL----YSKTP---CEDY-------------------- 749

Query: 515  ASTVEDAIRAADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGW 574
               VE A++ A                                I     PG +L+FMTG 
Sbjct: 750  ---VEAAVKQA------------------------------MTIHITSPPGDILIFMTGQ 776

Query: 575  DDIS----SLKEKL--LRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLAT 628
            D+I     SLKE++  L ++   +   +L+L  +  + +  Q  IF++PEDG RK ++AT
Sbjct: 777  DEIEAACFSLKERMEQLVSSSSREITNLLILPIYSQLPADLQAKIFQKPEDGARKCIVAT 836

Query: 629  NIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSXXXXXXXXXXVQPGEC 688
            NIAETS+T++ + +V+D G  K   ++       L    IS+ +            PG C
Sbjct: 837  NIAETSLTVDGIYYVIDTGYGKMKVFNPRMGMDALQVFPISRAASDQRAGRAGRTGPGTC 896

Query: 689  YHLYPRCVY-DAFAEYQLPEILRTPLQSLCLQIKSLRLGSISEFLSRALQSPEILAVQNA 747
            Y LY    Y +      +PEI RT L ++ L +KSL++ ++ +F    +  P    + N+
Sbjct: 897  YRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDF--DFMDPPPQENILNS 954

Query: 748  VEYLEIIGALDESENLTILGRYLAMLPMEPKLGKMLILGAIFSCLDPILTVVAGLSVRDP 807
            +  L ++GAL+    LT LG  +   P++P L KML++G    C+D +LT+V+ LSV   
Sbjct: 955  MYQLWVLGALNNVGGLTDLGWKMVEFPLDPPLAKMLLMGERLDCIDEVLTIVSMLSVPSV 1014

Query: 808  FLAPMDKKDLADAAKSQFSGAYSDHLALLSAYEGWKDADIDLGGYEYCWKNFLSLQSMKA 867
            F  P ++ + +DAA+ +F    SDHL LL+ Y+ WK+ D      ++C  ++L ++ ++ 
Sbjct: 1015 FFRPKERAEESDAAREKFFVPESDHLTLLNVYQQWKEHDYR---GDWCNDHYLQVKGLRK 1071

Query: 868  IDALRREFICLLKDIGLVDSNTASYNAWSYDVNLIRAVICFGLY 911
               +R + + +LK + +         +   D +++R  IC   +
Sbjct: 1072 AREVRSQLLDILKQLKI------ELRSCGPDWDIVRKAICSAYF 1109


>AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase |
            chr1:2040567-2047333 FORWARD LENGTH=1576
          Length = 1576

 Score =  290 bits (743), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 165/474 (34%), Positives = 266/474 (56%), Gaps = 18/474 (3%)

Query: 524  AADFKDYSPQTQESLSCW----NPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISS 579
            A + +  S Q Q+ L  +     P+ +   LI  ++  IC + + GA+LVF+ GW++IS 
Sbjct: 531  AGNIQSNSQQAQDLLDKYMATIKPEEVDVGLIVKLMKKICSDSKDGAILVFLPGWEEISK 590

Query: 580  LKEKLLRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITIND 639
             KEKLL +       + ++L  H  + + EQ+ +F  P  G RKIVLATNIAE+++TI+D
Sbjct: 591  TKEKLLDDRFFAHSAKFIILCLHSRVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDD 650

Query: 640  VVFVLDCGKAKETSYDALNNTPCLLPTWISKVSXXXXXXXXXXVQPGECYHLYPRCVYDA 699
            VV+V+D G+ KE SYD  N+   L  +W+SK +           Q G CYHLY +    +
Sbjct: 651  VVYVIDSGRMKEKSYDPYNDVSTLQSSWVSKANAKQRAGRAGRCQAGICYHLYSKLRAAS 710

Query: 700  FAEYQLPEILRTPLQSLCLQIKSLRLG-SISEFLSRALQSPEILAVQNAVEYLEIIGALD 758
              EY++PE++R P+  LCLQ+K L    ++++FL + +  P   +++NA+  L+ IGAL 
Sbjct: 711  LPEYRVPEVMRMPVDELCLQVKMLDPNCNVNDFLQKLMDPPVAQSIENALIILKDIGALT 770

Query: 759  ESENLTILGRYLAMLPMEPKLGKMLILGAIFSCLDPILTVVAGLSVRDPF---LAPMDKK 815
              E LT LG+    LP+ P++ KM+    + +CLDP L +      +DPF   L+P D+K
Sbjct: 771  PEEELTELGQKFGQLPVHPRISKMIYFAILVNCLDPALILACAADEKDPFTMPLSPGDRK 830

Query: 816  DLADAAKSQFS---GAYSDHLALLSAYEGWKDADIDLGGYEYCWKNFLSLQSMKAIDALR 872
              A AAK + +   G +SDHLA ++A++ WK+A       E+C K F+S   MK +D L 
Sbjct: 831  KAA-AAKHELASLYGDHSDHLATVAAFQCWKNAKASGQAKEFCSKYFISQVVMKRLDDLC 889

Query: 873  REFICLLKDIGLVDSNTASYNAWSYDVNLIRAVICFGLYP---GICSIVHNEKSFSLKTM 929
            R+    L   G++ S++++ +  ++D  ++RAVI  GLYP    +C +  N     ++T+
Sbjct: 890  RKLQGELNRHGVIPSSSSNCSLNAHDPGILRAVIAVGLYPMLGRMCPLSKNRTRSVIETI 949

Query: 930  EDGQVLL--YSNSVNARETTIPSPWLVFNEKIKVN-SVFLRDSTAVSDSVVLLF 980
               +V +   SN+V+   T      +VF+E  + +  V +R  T +    VLLF
Sbjct: 950  AGAKVRVPSLSNNVDMSSTKFDEALIVFDEITRGDWGVVIRSCTVLPTIPVLLF 1003



 Score =  231 bits (590), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 111/207 (53%), Positives = 148/207 (71%), Gaps = 4/207 (1%)

Query: 277 RRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAAC 336
           R I E RS LP    ++AI+S +  NQVV+I+GETGCGKTTQ+PQ++L+  +   +  AC
Sbjct: 208 REIFEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLD-HMWHSKKEAC 266

Query: 337 NIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLL 396
            IICTQPRRISA+SVS+R++ ERGE +G +VGYKVRL+   GR++ ++FCT GILLR L+
Sbjct: 267 KIICTQPRRISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVLI 326

Query: 397 A---DRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSY 453
               + ++  +TH+IVDEIHER    DF            P L+LILMSATLDAE FS Y
Sbjct: 327 GKGVNSSVPDITHIIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEY 386

Query: 454 FNGAPIMNIPGFTYPVRTYFLENILEM 480
           F G P++ +PGFTYPVRT+FL++ L +
Sbjct: 387 FGGCPVVRVPGFTYPVRTFFLDDALSV 413


>AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissue
           and tapetum | chr2:13120585-13126635 REVERSE LENGTH=1299
          Length = 1299

 Score =  286 bits (732), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 159/460 (34%), Positives = 251/460 (54%), Gaps = 12/460 (2%)

Query: 538 LSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVL 597
           ++  NP+ +  SLI+ ++  IC +   GA+LVF+ GWDDI+  +++LL N    D  +  
Sbjct: 525 MATINPEQVDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSAKFD 584

Query: 598 LLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDAL 657
           ++  H  + + EQ+ +F  P  G RKIVLATNIAE+++TI+DVV+V+D G+ KE SYD  
Sbjct: 585 IICLHSMVPAGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPY 644

Query: 658 NNTPCLLPTWISKVSXXXXXXXXXXVQPGECYHLYPRCVYDAFAEYQLPEILRTPLQSLC 717
           NN   L  +W+SK +           QPG CYHLY R    +  ++++PEI R P++ LC
Sbjct: 645 NNVSTLQSSWVSKANAKQRQGRAGRCQPGICYHLYSRLRAASMPDFKVPEIKRMPVEELC 704

Query: 718 LQIKSLRLG-SISEFLSRALQSPEILAVQNAVEYLEIIGALDESENLTILGRYLAMLPME 776
           LQ+K L      ++FL + L  P   ++ NA+  L+ IGAL   E LT LG     LP+ 
Sbjct: 705 LQVKILDPNCKTNDFLQKLLDPPVDQSIANALSILQDIGALTPQEELTELGEKFGHLPVH 764

Query: 777 PKLGKMLILGAIFSCLDPILTVVAGLSVRDPFLAPM-----DKKDLADAAKSQFSGAYSD 831
           P + KML    + +CLDP LT+      ++PF  PM      K   A    +   G  SD
Sbjct: 765 PLISKMLFFAVLVNCLDPALTLACAADYKEPFTMPMSPVERQKAAAAKLELASLCGGDSD 824

Query: 832 HLALLSAYEGWKDADIDLGGYEYCWKNFLSLQSMKAIDALRREFICLLKDIGLVDSNTAS 891
           HLA+++A+E WK+A       E+C + F+S  +MK +D +R +    LK  G++ ++ +S
Sbjct: 825 HLAVVAAFECWKNAKGRGLSAEFCSQYFVSPSAMKMLDQMRSQLESELKRHGIIPNDISS 884

Query: 892 YNAWSYDVNLIRAVICFGLYPGI---CSIVHNEKSFSLKTMEDGQVLLY--SNSVNARET 946
            +  S D  ++RAV+  GLYP +   C    N +   ++T    +V ++  SN+ N    
Sbjct: 885 CSQNSRDPGILRAVLAVGLYPMVGRLCPAFGNNRRTIVETASGAKVRVHSLSNNFNLSSK 944

Query: 947 TIPSPWLVFNEKIKVN-SVFLRDSTAVSDSVVLLFGGNLS 985
                 LVF+E  + +  + +R+ T   D  +LL    ++
Sbjct: 945 KYDESLLVFDEITRGDGGMHIRNCTVARDLPLLLISTEIA 984



 Score =  233 bits (593), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 112/207 (54%), Positives = 145/207 (70%), Gaps = 4/207 (1%)

Query: 277 RRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAAC 336
           + I + RS LP    K+AI S +  NQV++ISGETGCGKTTQ+PQ++L+    + R   C
Sbjct: 178 KEITKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKR-ETC 236

Query: 337 NIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLL 396
            I+CTQPRRISAMSVSER++ ERGE +GE++GYKVRL+   GR + ++FCT GILLR L+
Sbjct: 237 KIVCTQPRRISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLV 296

Query: 397 ADRNLEGV---THVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSY 453
              ++  V   TH+IVDEIHER    DF            P L+LILMSATLDAE FS Y
Sbjct: 297 GKGSVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSGY 356

Query: 454 FNGAPIMNIPGFTYPVRTYFLENILEM 480
           F G P++ +PGFTYPVRT +LE++L +
Sbjct: 357 FGGCPVVRVPGFTYPVRTLYLEDVLSI 383


>AT4G18465.1 | Symbols:  | RNA helicase family protein |
           chr4:10197056-10201611 FORWARD LENGTH=695
          Length = 695

 Score =  283 bits (723), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 207/700 (29%), Positives = 341/700 (48%), Gaps = 75/700 (10%)

Query: 283 RSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNIICTQ 342
           R  LP YK +  IL ++  +   II GETG GKTTQIPQ++ E+      G    I CTQ
Sbjct: 45  RQRLPVYKYRTEILYLVENHATTIIVGETGSGKTTQIPQYLKEAG--WAEGGRV-IACTQ 101

Query: 343 PRRISAMSVSERVASERGEKLGESVGYKVRLEG-VKGRDTHILFCTTGILLRRLLADRNL 401
           PRR++  +VS RVA E G  LGE VGY +R E       T + F T G+L+R ++ D  L
Sbjct: 102 PRRLAVQAVSARVAEEMGVNLGEEVGYTIRFEDHTTSGVTSVKFLTDGVLIREMMEDPLL 161

Query: 402 EGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFNGAPIMN 461
              + +++DE HER ++ D            RPEL+LI+ SAT++A+  S++FN +   +
Sbjct: 162 TKYSVIMIDEAHERSISTDILLGLLKKIQRRRPELRLIISSATIEAKTMSNFFNSSKKRH 221

Query: 462 IPGFTYPVRTYFLENILEMTGYRLTPYNQIDDYGQERMWKMNKQAPRKRKSQIASTVEDA 521
            P  + P             G +L P           +  +  +    +   +   V D 
Sbjct: 222 APEGSTP-------------GPKLEP----------AILSVEGRGFSVKIHYVEEPVSDY 258

Query: 522 IRAADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISS-- 579
           IR                         S++  IL  I E E PG VLVF+TG +DI +  
Sbjct: 259 IR-------------------------SVVSTILL-INEREPPGDVLVFLTGQEDIETAI 292

Query: 580 --LKEKLLRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITI 637
             L+E+   N    + + +L L  +  ++ SEQ LIF     G RK++L+TNIAETS+T+
Sbjct: 293 KLLEEEAHSNQ--KNSSGLLPLPLYSGLSRSEQELIFTPTPRGKRKVILSTNIAETSLTL 350

Query: 638 NDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSXXXXXXXXXXVQPGECYHLYPRCVY 697
             VV+V+D G +K+  Y+ +++   L+   ISK S          V+PG+CY LY    +
Sbjct: 351 EGVVYVIDSGFSKQKFYNPISDIESLVVAPISKASARQRSGRAGRVRPGKCYRLYTEDYF 410

Query: 698 -DAFAEYQLPEILRTPLQSLCLQIKSLRLGSISEFLSRALQSPEILAVQNAVEYLEIIGA 756
            +      +PE+ R+ L S  +Q+K+L + +I  F   A  S E  A+  A+E L  +  
Sbjct: 411 LNQMPGEGIPEMQRSNLVSTVIQLKALGIDNILGFDWPAPPSSE--AMIRALEVLYSLQI 468

Query: 757 LDESENLTI-LGRYLAMLPMEPKLGKMLILGAIFSCLDPILTVVAGLSVRDPFLAPMDKK 815
           LD+   LT   G  +A LP++P + KM++  +   C   I+T+ A LSV+  ++     +
Sbjct: 469 LDDDAKLTSPTGFQVAELPLDPMISKMILASSELGCSHEIITIAAVLSVQSVWIIARGVQ 528

Query: 816 DLADAAKSQFSGAYSDHLALLSAYEGWKDADIDLGGYEYCWKNFLSLQSMKAIDALRREF 875
              D AK +F+ A  DH+  L+ Y+G+ ++       ++C+KNFL+ QSMK +  +R + 
Sbjct: 529 KEQDEAKLRFAAAEGDHVTFLNVYKGFLESKKPT---QWCYKNFLNYQSMKKVVEIRDQL 585

Query: 876 ICLLKDIGLVDSNTASYNAWSYDVNLIRAVICFGLYPGICSIVHNEKSFSLKTMEDGQVL 935
             + + +G+      +  +   D+  +R  +  G +   C +  +            +V 
Sbjct: 586 KRIARRLGI------TLKSCDGDMEAVRKAVTAGFFANACRLEPHSNGVYKTIRGSEEVY 639

Query: 936 LYSNSVNARETTIPSPWLVFNEKIKVNSVFLRDSTAVSDS 975
           ++ +SV  R   +   W+V+   +     ++R+   ++ S
Sbjct: 640 IHPSSVLFR---VNPKWVVYQSIVSTERQYMRNVVTINPS 676


>AT1G27900.1 | Symbols:  | RNA helicase family protein |
            chr1:9715615-9720346 REVERSE LENGTH=700
          Length = 700

 Score =  265 bits (676), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 216/738 (29%), Positives = 336/738 (45%), Gaps = 90/738 (12%)

Query: 284  SSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNIICTQP 343
            ++LP  + +E I+  + +N VV+I GETG GK+TQ+ Q IL        G    I  TQP
Sbjct: 2    ANLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQ-ILHRHGYTKSGV---IAITQP 57

Query: 344  RRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLADRNLEG 403
            RR++A+SV+ RVA E    LGE VGY +R E      T I + T G+LLR  L++  L+ 
Sbjct: 58   RRVAAVSVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDD 117

Query: 404  VTHVIVDEIHERGMNEDFXXXXXXXXXXHRP-ELKLILMSATLDAELFSSYFNGAPIMNI 462
             + +I+DE HER +N D            R    K+++ SATLD E  S +F+G      
Sbjct: 118  YSVIILDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGC----- 172

Query: 463  PGFTYPVRTYFLENILEMTGYRLTPYNQIDDYGQERMWKMNKQAPRKRKSQIASTVEDAI 522
            P    P + Y +E +                Y +ER                 S +E ++
Sbjct: 173  PVLNVPGKLYPVEIL----------------YSKERP---------------VSYIESSL 201

Query: 523  RAADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKE 582
            + A                               +I   E  G +L+FMTG DDI  L  
Sbjct: 202  KVA------------------------------IDIHVREPEGDILIFMTGQDDIEKLVS 231

Query: 583  KL---LRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITIND 639
            +L   +R+   G     ++   HGS+    Q  +F  P    R+ +++TNIAETS+T++ 
Sbjct: 232  RLEEKVRSLAEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDG 291

Query: 640  VVFVLDCGKAKETSYDALNNTPCLLPTWISKVSXXXXXXXXXXVQPGECYHLYPRCVY-D 698
            VV+V+D G  K+  Y+  +    L    ISKV            +PG+CY LYP  VY D
Sbjct: 292  VVYVIDSGYVKQRQYNPSSGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRD 351

Query: 699  AFAEYQLPEILRTPLQSLCLQIKSLRLGSISEFLSRALQSPEILAVQNAVEYLEIIGALD 758
             F +  +PEI RT L    L +KSL L  I       L +P   ++++A++ L  I A+D
Sbjct: 352  DFLDATIPEIQRTSLAGSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDAID 411

Query: 759  ESENLTILGRYLAMLPMEPKLGKMLILGAIFSCLDPILTVVAGLSVRDPFL----APMDK 814
            E+  +T +GR ++ LP+EP L + LI      CL   LTVVA LS     L     P +K
Sbjct: 412  ENGAITRIGRTMSDLPLEPSLSRTLIEANETGCLSQALTVVAMLSAETTLLPARSKPSEK 471

Query: 815  KDLADAAKSQFSGA-YSDHLALLSAYEGWKDADIDLGGYEYCWKNFLSLQSMKAIDALRR 873
            K   D   +  +G+ Y DH+ LL  +E W   + D     +C +N + ++ M  +  +RR
Sbjct: 472  KRKHDEDSNLPNGSGYGDHIQLLQIFESWDRTNYD---PVWCKENGMQVRGMVFVKDVRR 528

Query: 874  EFICLLKDIG---LVDSNTASYNAWSYDVNLIRAVICFGLYPGICSIVHNEKSFSLKTME 930
            +   +++ I    L        ++   D   +R  +C G    I   +     +   + +
Sbjct: 529  QLCQIMQKISKDRLEVGADGRKSSSRDDYRKLRKALCVGNANQIAERMLRHNGYRTLSFQ 588

Query: 931  DGQVLLYSNSVNARETTIPSP-WLVFNEKIKVNSVFLRDSTAVSDSVVLLFGGNLSKGDA 989
               V ++ +SV + +     P ++V++E I     F+R+  AV  + V      + K   
Sbjct: 589  SQLVQVHPSSVLSADNDGMMPNYVVYHELISTTRPFMRNVCAVDMAWVAPIKRKIEKL-- 646

Query: 990  DNHLKMLGGYLEFFMEPD 1007
             N  K+ GG    F  P+
Sbjct: 647  -NVRKLSGGPAPSFKVPE 663


>AT5G10370.1 | Symbols:  | helicase domain-containing protein / IBR
           domain-containing protein / zinc finger protein-related
           | chr5:3261245-3267188 FORWARD LENGTH=1775
          Length = 1775

 Score =  228 bits (581), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 198/715 (27%), Positives = 318/715 (44%), Gaps = 103/715 (14%)

Query: 277 RRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAAC 336
           R        LP Y  +  IL  + R Q++++ GETG GK+TQ+ QF+ +S +     A+ 
Sbjct: 297 RECRRLEDGLPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGV----AASE 352

Query: 337 NIICTQPRRISAMSVSERVASERGEKLGE-SVGYKVRLEGVKGRDTHILFCTTGILLRRL 395
           +I+CTQPR+I+AM++++RV  E      E +V         +   + +++ T   LL+  
Sbjct: 353 SIVCTQPRKIAAMTLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHY 412

Query: 396 LADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFN 455
           + DR+L G++ VI+DE HER +N D            R +L+L++MSAT DA+  S YF 
Sbjct: 413 MKDRSLSGISCVIIDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFF 472

Query: 456 GAPIMNIPGFTYPVRTYFLENILEMTGYRLTPYNQIDDYGQERMWKMNKQAPRKRKSQIA 515
              I+ + G  +PV   +  +  E                                  IA
Sbjct: 473 SCGILLVNGRNFPVEIVYSPSDTEENSV---------------------------VGGIA 505

Query: 516 STVEDAIRAADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWD 575
           S V D ++ A                                I + E+ G +L F+T   
Sbjct: 506 SYVGDVVKMA------------------------------VEIHKTEKEGTILAFLTSQA 535

Query: 576 DISSLKEKLLRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSI 635
           ++    E+ +  + +  P        HG ++  EQ  +F+    G RK++ ATNIAETS+
Sbjct: 536 EVEWACERFITPSAIALP-------LHGKLSFEEQFRVFQN-HPGRRKVIFATNIAETSL 587

Query: 636 TINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSXXXXXXXXXXVQPGECYHLYPRC 695
           TI  V +V+D G  KE+ Y+       L    +S+ S           +PG CY LY + 
Sbjct: 588 TIPGVKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKN 647

Query: 696 VYDAFAEYQLPEILRTPLQSLCLQIKSLRLGSISEFLSRALQSPEILAVQNAVEYLEIIG 755
            +D+    Q PEI R  L    L++ +L + +I+EF       PE +A+  AV+ L  +G
Sbjct: 648 DFDSMNLNQEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAPVPEAIAM--AVQNLVQLG 705

Query: 756 ALDES---ENLTILGRYLAMLPMEPKLGKMLILGAIFSCLDP----ILTVVAGLSVRDPF 808
           A+ E      LT  G  L  L +EPKLGK LILG     +      +  V+A  S     
Sbjct: 706 AVVEKNGVHELTQEGHCLVKLGLEPKLGK-LILGCFRHRMGKEGIVLAAVMANASSIFCR 764

Query: 809 LAPMDKKDLADAAKSQFSGAYSDHLALLSAYEGWKDADIDLGGYEYCWKNFLSLQSMKAI 868
           +   D K  AD  K QF     D   LLS Y+ W     +    ++CW+N L+ +SM+  
Sbjct: 765 VGNFDDKMKADRLKVQFCNQNGDLFTLLSVYKEWASLPRERRN-KWCWENSLNAKSMRRC 823

Query: 869 DALRREF-ICLLKDIGLVDSNTASYNAWS------YDVNLIRAVIC-----FGLYPGICS 916
           +   +E  IC+ +++ LV   + SY  W+      +D +L   ++        +Y G   
Sbjct: 824 EDTVKELEICIERELTLV---SPSYWVWNPNEGTKHDKHLKMVILASLAENVAMYTG--- 877

Query: 917 IVHNEKSFSLKTMEDGQVLLYSNSVNARETTIPSPWLVFNEKIKVNSVFLRDSTA 971
             +N+  + +  +   QV L+ +         PS W+VF E + +   +L   TA
Sbjct: 878 --YNQLGYEV-ALTGQQVQLHPSCSLLAFGQKPS-WVVFGELLSIVDQYLVCVTA 928


>AT4G01020.1 | Symbols:  | helicase domain-containing protein / IBR
           domain-containing protein / zinc finger protein-related
           | chr4:439086-445043 FORWARD LENGTH=1787
          Length = 1787

 Score =  219 bits (559), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 180/629 (28%), Positives = 287/629 (45%), Gaps = 85/629 (13%)

Query: 277 RRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAAC 336
           R        LP Y  +  IL  +   Q++++ GETG GK+TQ+ QF+ +S +     A+ 
Sbjct: 294 RECRRLEDGLPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGV----AASE 349

Query: 337 NIICTQPRRISAMSVSERVASERGEKLGE-SVGYKVRLEGVKGRDTHILFCTTGILLRRL 395
           +I+CTQPR+I+AM++++RV  E      E +V         +   + +++ T   LL+  
Sbjct: 350 SIVCTQPRKIAAMTLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHY 409

Query: 396 LADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFN 455
           + DR+L G++ VI+DE HER +N D            R +L+L++MSAT DA   S Y  
Sbjct: 410 MKDRSLSGISCVIIDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYLF 469

Query: 456 GAPIMNIPGFTYPVRTYFLENILEMTGYRLTPYNQIDDYGQERMWKMNKQAPRKRKSQIA 515
              I+++ G  +PV     E +   +G   T  N +                     +IA
Sbjct: 470 DCGILHVNGRNFPV-----EIVYSPSG---TEENSV-------------------VGRIA 502

Query: 516 STVEDAIRAADFKDYSPQTQESLSCWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWD 575
           S   D ++ A                                I + E+ G +L F+T   
Sbjct: 503 SYAGDVVKMA------------------------------VEIHKTEKEGTILAFLTSQA 532

Query: 576 DISSLKEKLLRNNVLGDPNRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSI 635
           ++    E+ +  + +  P        HG ++  EQ ++F+    G RK++ ATNIAETS+
Sbjct: 533 EVEWACERFVAPSAIALP-------LHGKLSFEEQFMVFQN-YPGRRKVIFATNIAETSL 584

Query: 636 TINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSXXXXXXXXXXVQPGECYHLYPRC 695
           TI  V +V+D G  KE+ Y+       L    +S+ S           +PG CY LY + 
Sbjct: 585 TIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKT 644

Query: 696 VYDAFAEYQLPEILRTPLQSLCLQIKSLRLGSISEFLSRALQSPEILAVQNAVEYLEIIG 755
            +D+    Q PEI R  L    L++ +L + +I+ F       PE +A+  A++ L  +G
Sbjct: 645 DFDSMNLNQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEAIAM--AIQNLVQLG 702

Query: 756 ALDESEN---LTILGRYLAMLPMEPKLGKMLILGAIFSCLDP----ILTVVAGLSVRDPF 808
           A+ E      LT  G  L  L +EPKLGK LILG     +      +  V+A  S     
Sbjct: 703 AVVEKNGVLELTQEGHCLVKLGLEPKLGK-LILGCFRHRMGKEGIVLAAVMANASSIFCR 761

Query: 809 LAPMDKKDLADAAKSQFSGAYSDHLALLSAYEGWKDADIDLGGYEYCWKNFLSLQSMKAI 868
           +   D K  AD  K QF     D   LLS Y+ W     D    ++CW+N L+ +SM+  
Sbjct: 762 VGNFDDKMKADRLKVQFCNDNGDLFTLLSVYKEWASLPRDRRN-KWCWENSLNAKSMRRC 820

Query: 869 DALRREF-ICLLKDIGLVDSNTASYNAWS 896
           +   +E  IC+ +++ LV   + SY  W+
Sbjct: 821 EDTVKELEICIERELTLV---SPSYWVWN 846


>AT3G62310.1 | Symbols:  | RNA helicase family protein |
           chr3:23057516-23060561 REVERSE LENGTH=726
          Length = 726

 Score =  193 bits (491), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 136/425 (32%), Positives = 230/425 (54%), Gaps = 31/425 (7%)

Query: 562 ERPGAVLVFMTGWDDISSLKEKLLRN-NVLGD---PNRVLLLACHGSMASSEQRLIFEEP 617
           E PG +LVF+TG ++I     K+ +    LGD   P +V+ L  + ++  + Q+ IF+  
Sbjct: 273 EPPGDILVFLTGEEEIEDACRKINKEVGNLGDQVGPIKVVPL--YSTLPPAMQQKIFDPA 330

Query: 618 EDGV-------RKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISK 670
            + V       RKIV++TNIAETS+TI+ +V+V+D G AK+  Y+       LL + ISK
Sbjct: 331 PEPVTEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISK 390

Query: 671 VSXXXXXXXXXXVQPGECYHLYPRCVYDAFAEYQ-LPEILRTPLQSLCLQIKSLRLGSIS 729
            S           +PG+C+ LY    ++   + Q  PEILR+ L +  L +K L +  + 
Sbjct: 391 ASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLV 450

Query: 730 EFLSRALQSPEILAVQNAVEYLEIIGALDESENLTILGRYLAMLPMEPKLGKMLILGAIF 789
            F      +PE L    A+E L  +GALD+  NLT  G  ++  P++P++ KMLI+   F
Sbjct: 451 HFDFMDPPAPETL--MRALEVLNYLGALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEF 508

Query: 790 SCLDPILTVVAGLSVRDPFLAPMDKKDLADAAKSQFSGAYSDHLALLSAYEGWKDADIDL 849
           +C + IL+V A LSV + F+ P + +  AD AK++F     DHL LL+ Y  +K  + D 
Sbjct: 509 NCSNEILSVSAMLSVPNCFIRPREAQKAADEAKARFGHIEGDHLTLLNVYHAFKQNNEDP 568

Query: 850 GGYEYCWKNFLSLQSMKAIDALRREFICLLKDIGLVDSNTASYNAWSYDVNLIRAVICFG 909
               +C++NF++ ++MK+ D +R++ + ++    L   +T  +N+  Y +N IR  +  G
Sbjct: 569 N---WCYENFINNRAMKSADNVRQQLVRIMSRFNLKMCST-DFNSRDYYIN-IRKAMLAG 623

Query: 910 LYPGICSIVHNEKSFSLKTMEDGQV--LLYSNSVNARETTIPSPWLVFNEKIKVNSVFLR 967
            +     + H E++    T++D QV  L  SN ++ +       W+++NE +  +  F+R
Sbjct: 624 YF---MQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPE-----WVIYNEYVLTSRNFIR 675

Query: 968 DSTAV 972
             T +
Sbjct: 676 TVTDI 680



 Score =  175 bits (444), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 94/217 (43%), Positives = 129/217 (59%), Gaps = 13/217 (5%)

Query: 268 HAWQESPEGRR---ILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFIL 324
           + W   P  +R   ILE R +LP + +KE  L  L+ NQ +I+ GETG GKTTQIPQF+ 
Sbjct: 40  NKWNGKPYSQRYYDILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFV- 98

Query: 325 ESEIEAVRGAACN------IICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKG 378
              I+AV     +      + CTQPRR++AMSVS RVA E    +GE VGY +R E    
Sbjct: 99  ---IDAVDAETSDKRRKWLVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSS 155

Query: 379 RDTHILFCTTGILLRRLLADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKL 438
             T + + T G+LLR  +AD  LE    +I+DE HER +  D           +RP+LKL
Sbjct: 156 PRTVLKYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKL 215

Query: 439 ILMSATLDAELFSSYFNGAPIMNIPGFTYPVRTYFLE 475
           ++MSATL+AE F  YF+GAP+M +PG  +PV  ++ +
Sbjct: 216 VVMSATLEAEKFQDYFSGAPLMKVPGRLHPVEIFYTQ 252


>AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein |
           chr1:11742356-11749286 REVERSE LENGTH=1034
          Length = 1034

 Score =  189 bits (479), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/413 (31%), Positives = 222/413 (53%), Gaps = 25/413 (6%)

Query: 565 GAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVL-LLAC--HGSMASSEQRLIFEEPEDGV 621
           G +LVF TG ++I + +E +L++ + G   ++  L+ C  + ++ S  Q  IFE   +G 
Sbjct: 603 GDILVFFTGQEEIETAEE-ILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGA 661

Query: 622 RKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSXXXXXXXXX 681
           RK+VLATNIAETS+TI+ + +V+D G +K  SY+       LL T ISK S         
Sbjct: 662 RKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAG 721

Query: 682 XVQPGECYHLYPRCVYDA-FAEYQLPEILRTPLQSLCLQIKSLRLGSISEFLSRALQSPE 740
              PG+CY LY    Y+    E  +PE+ RT L S+ L +KSL +  +  F    +  P 
Sbjct: 722 RTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINF--DFMDPPP 779

Query: 741 ILAVQNAVEYLEIIGALDESENLTILGRYLAMLPMEPKLGKMLILGAIFSCLDPILTVVA 800
             A+  ++E L  +GAL++   LT  GR +A  P++P L KM+++   + C D I+++ A
Sbjct: 780 AEALVKSLELLFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAA 839

Query: 801 GLSVRDP-FLAPMDKKDLADAAKSQF-SGAYSDHLALLSAYEGWKDADIDLGGYEYCWKN 858
            LS+    F  P DK+  AD A+  F +G   DH+ALL  Y  WK+ +      ++C++N
Sbjct: 840 MLSIGGSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFST---QWCYEN 896

Query: 859 FLSLQSMKAIDALRREFICLLKDIGLVDSNTASYNAWSYDVNLIRAVICFGLYPGICSIV 918
           ++ ++SMK    +R +   LL+ + +  S+  +      +++ +R  I  G +P    + 
Sbjct: 897 YIQVRSMKRARDIRDQLEGLLERVEIDISSNLN------ELDSVRKSIVAGFFPHTAKL- 949

Query: 919 HNEKSFSLKTMEDGQ-VLLYSNSVNARETTIPSPWLVFNEKIKVNSVFLRDST 970
             +K+ S +T++  Q V ++ NS       +P  W+V++E +  +  ++R  T
Sbjct: 950 --QKNGSYRTVKHPQTVHIHPNS--GLSQVLPR-WVVYHELVLTSKEYMRQVT 997



 Score =  168 bits (426), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 88/189 (46%), Positives = 118/189 (62%), Gaps = 4/189 (2%)

Query: 281 EFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNIIC 340
           E R SLP Y  ++ +L  +  +QV++I G+TG GKTTQIPQ++ E+     RG    + C
Sbjct: 389 EVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGY-TKRG---KVGC 444

Query: 341 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLADRN 400
           TQPRR++AMSV+ RVA E G KLG  VGY +R E      T + + T G+LLR LL + +
Sbjct: 445 TQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPD 504

Query: 401 LEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFNGAPIM 460
           L   + VIVDE HER ++ D            RP+LKL++ SAT+DAE FS YF+ API 
Sbjct: 505 LASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIF 564

Query: 461 NIPGFTYPV 469
           + PG  YPV
Sbjct: 565 SFPGRRYPV 573


>AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family protein |
            chr1:11742356-11749286 REVERSE LENGTH=1044
          Length = 1044

 Score =  188 bits (478), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/413 (31%), Positives = 222/413 (53%), Gaps = 25/413 (6%)

Query: 565  GAVLVFMTGWDDISSLKEKLLRNNVLGDPNRVL-LLAC--HGSMASSEQRLIFEEPEDGV 621
            G +LVF TG ++I + +E +L++ + G   ++  L+ C  + ++ S  Q  IFE   +G 
Sbjct: 613  GDILVFFTGQEEIETAEE-ILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGA 671

Query: 622  RKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSXXXXXXXXX 681
            RK+VLATNIAETS+TI+ + +V+D G +K  SY+       LL T ISK S         
Sbjct: 672  RKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAG 731

Query: 682  XVQPGECYHLYPRCVYDA-FAEYQLPEILRTPLQSLCLQIKSLRLGSISEFLSRALQSPE 740
               PG+CY LY    Y+    E  +PE+ RT L S+ L +KSL +  +  F    +  P 
Sbjct: 732  RTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINF--DFMDPPP 789

Query: 741  ILAVQNAVEYLEIIGALDESENLTILGRYLAMLPMEPKLGKMLILGAIFSCLDPILTVVA 800
              A+  ++E L  +GAL++   LT  GR +A  P++P L KM+++   + C D I+++ A
Sbjct: 790  AEALVKSLELLFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAA 849

Query: 801  GLSVRDP-FLAPMDKKDLADAAKSQF-SGAYSDHLALLSAYEGWKDADIDLGGYEYCWKN 858
             LS+    F  P DK+  AD A+  F +G   DH+ALL  Y  WK+ +      ++C++N
Sbjct: 850  MLSIGGSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFST---QWCYEN 906

Query: 859  FLSLQSMKAIDALRREFICLLKDIGLVDSNTASYNAWSYDVNLIRAVICFGLYPGICSIV 918
            ++ ++SMK    +R +   LL+ + +  S+  +      +++ +R  I  G +P    + 
Sbjct: 907  YIQVRSMKRARDIRDQLEGLLERVEIDISSNLN------ELDSVRKSIVAGFFPHTAKL- 959

Query: 919  HNEKSFSLKTMEDGQ-VLLYSNSVNARETTIPSPWLVFNEKIKVNSVFLRDST 970
              +K+ S +T++  Q V ++ NS       +P  W+V++E +  +  ++R  T
Sbjct: 960  --QKNGSYRTVKHPQTVHIHPNS--GLSQVLPR-WVVYHELVLTSKEYMRQVT 1007



 Score =  168 bits (426), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 88/189 (46%), Positives = 118/189 (62%), Gaps = 4/189 (2%)

Query: 281 EFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNIIC 340
           E R SLP Y  ++ +L  +  +QV++I G+TG GKTTQIPQ++ E+     RG    + C
Sbjct: 399 EVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGY-TKRG---KVGC 454

Query: 341 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLADRN 400
           TQPRR++AMSV+ RVA E G KLG  VGY +R E      T + + T G+LLR LL + +
Sbjct: 455 TQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPD 514

Query: 401 LEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFNGAPIM 460
           L   + VIVDE HER ++ D            RP+LKL++ SAT+DAE FS YF+ API 
Sbjct: 515 LASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIF 574

Query: 461 NIPGFTYPV 469
           + PG  YPV
Sbjct: 575 SFPGRRYPV 583


>AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protein |
            chr2:14872728-14879615 FORWARD LENGTH=1044
          Length = 1044

 Score =  184 bits (468), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/411 (31%), Positives = 217/411 (52%), Gaps = 21/411 (5%)

Query: 565  GAVLVFMTGWDDISSLKEKLLRN-NVLGDPNRVLLLA-CHGSMASSEQRLIFEEPEDGVR 622
            G VLVF+ G ++I +++E L      LG   R L++   + ++ S  Q  IFE   +G R
Sbjct: 613  GDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGAR 672

Query: 623  KIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSXXXXXXXXXX 682
            K+VLATNIAETS+TI+ + +V+D G +K  SY+       LL T ISK S          
Sbjct: 673  KVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGR 732

Query: 683  VQPGECYHLYPRC-VYDAFAEYQLPEILRTPLQSLCLQIKSLRLGSISEFLSRALQSPEI 741
              PG+CY LY     Y+   +  +PEI RT L S+ L +KSL + ++  F    +  P  
Sbjct: 733  TSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNF--DFMDPPPS 790

Query: 742  LAVQNAVEYLEIIGALDESENLTILGRYLAMLPMEPKLGKMLILGAIFSCLDPILTVVAG 801
             A+  ++E L  +GAL++   LT  GR +A  P++P L KM+++   + C D I+++ A 
Sbjct: 791  EALIKSLELLFALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAM 850

Query: 802  LSVRDP-FLAPMDKKDLADAAKSQFS-GAYSDHLALLSAYEGWKDADIDLGGYEYCWKNF 859
            LS+    F  P DK+  AD A   F  G   DH+A L  Y  WK+ +      ++C++N+
Sbjct: 851  LSIGPSIFYRPKDKQVHADNAMKNFHVGNVGDHIAFLKIYNSWKETNYST---QWCYENY 907

Query: 860  LSLQSMKAIDALRREFICLLKDIGLVDSNTASYNAWSYDVNLIRAVICFGLYPGICSIVH 919
            + ++SMK    +R +   LL+ + +  S+ A+      +++ IR  I  G +P    +  
Sbjct: 908  IQVRSMKRARDIRDQLEGLLERVEIDVSSNAN------ELDSIRKSIVAGFFPHTAKL-- 959

Query: 920  NEKSFSLKTMEDGQVLLYSNSVNARETTIPSPWLVFNEKIKVNSVFLRDST 970
             +K+ S +T++  Q  ++ +  +     +P  W+V+++ +  +  ++R  T
Sbjct: 960  -QKNGSYRTVKHPQT-VHIHPASGLSQVLPR-WVVYHQLVLTSKEYMRQVT 1007



 Score =  165 bits (418), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 86/193 (44%), Positives = 117/193 (60%), Gaps = 4/193 (2%)

Query: 281 EFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNIIC 340
           E R +LP Y  ++ +L+ +  +QV+II GETG GKTTQIPQ++ E+    +      + C
Sbjct: 399 EDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKL----GKVGC 454

Query: 341 TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLADRN 400
           TQPRR++AMSV+ RVA E G KLG  VGY +R E      T + + T G+LLR LL + +
Sbjct: 455 TQPRRVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPD 514

Query: 401 LEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFNGAPIM 460
           L   + +IVDE HER +  D            RP+LKL++ SAT+DAE FS +F+ API 
Sbjct: 515 LGSYSVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDFFDQAPIF 574

Query: 461 NIPGFTYPVRTYF 473
             PG  YPV   F
Sbjct: 575 RFPGRRYPVDICF 587


>AT3G26560.1 | Symbols:  | ATP-dependent RNA helicase, putative |
            chr3:9750122-9753719 REVERSE LENGTH=1168
          Length = 1168

 Score =  181 bits (459), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 216/432 (50%), Gaps = 21/432 (4%)

Query: 544  DCIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKLL-RNNVLG-DPNRVLLLAC 601
            D +  +LI  +  ++ E E  G +LVF+TG ++I S  + L  R   LG +   +++L  
Sbjct: 705  DYLDAALITVLQIHLTEPE--GDILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPV 762

Query: 602  HGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTP 661
            + ++ S  Q  IF+ P  G RK+V+ATNIAE S+TI+ + +V+D G AK+  Y+      
Sbjct: 763  YSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLE 822

Query: 662  CLLPTWISKVSXXXXXXXXXXVQPGECYHLYPRCVY-DAFAEYQLPEILRTPLQSLCLQI 720
             L+ T IS+ S            PG+CY LY    Y +      +PEI R  L    L +
Sbjct: 823  SLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTM 882

Query: 721  KSLRLGSISEFLSRALQSPEILAVQNAVEYLEIIGALDESENLTILGRYLAMLPMEPKLG 780
            K++ +  +  F    +  P+  A+ +A+E L  +GALDE   LT LGR +A  P+EP L 
Sbjct: 883  KAMGINDLLSF--DFMDPPQPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLS 940

Query: 781  KMLILGAIFSCLDPILTVVAGLSVRDPFLAPMDKKDLADAAKSQFSGAYSDHLALLSAYE 840
            KML+      C D ILT++A +   + F  P +K+  AD  +++F     DHL LL+ YE
Sbjct: 941  KMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYE 1000

Query: 841  GWKDADIDLGGYEYCWKNFLSLQSMKAIDALRREFICLLKDIGLVDSNTASYNAWSYDVN 900
             WK  +       +C++NF+  +S++    +R++ + ++    L D  TA  N       
Sbjct: 1001 AWKAKNF---SGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKL-DVVTAGKN-----FT 1051

Query: 901  LIRAVICFGLYPGICSIVHNEKSFSLKTMEDGQVLLYSNSVNARETTIPSPWLVFNEKIK 960
             IR  I  G +         +     +T+ + Q  +Y +  +A     P  W+++++ + 
Sbjct: 1052 KIRKAITAGFF---FHGARKDPQEGYRTLVENQP-VYIHPSSALFQRQPD-WVIYHDLVM 1106

Query: 961  VNSVFLRDSTAV 972
                ++R+ T +
Sbjct: 1107 TTKEYMREVTVI 1118



 Score =  166 bits (421), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 89/195 (45%), Positives = 119/195 (61%), Gaps = 4/195 (2%)

Query: 279 ILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNI 338
           I E R SLP YK K+ ++  +  NQV+++ GETG GKTTQ+ Q++     EA       I
Sbjct: 508 IQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYL----AEAGYTTKGKI 563

Query: 339 ICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLAD 398
            CTQPRR++AMSV++RVA E G +LGE VGY +R E   G DT I + T G+LLR +L D
Sbjct: 564 GCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILID 623

Query: 399 RNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYFNGAP 458
            NL   + +++DE HER ++ D            R +L+LI+ SATLDAE FS YF    
Sbjct: 624 ENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCN 683

Query: 459 IMNIPGFTYPVRTYF 473
           I  IPG T+PV   +
Sbjct: 684 IFTIPGRTFPVEILY 698


>AT4G16680.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr4:9388613-9390774
           REVERSE LENGTH=656
          Length = 656

 Score =  163 bits (412), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 93/207 (44%), Positives = 126/207 (60%), Gaps = 10/207 (4%)

Query: 267 QHAWQESPEGRRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILES 326
           + A +++ EGR   EF   LP +  +E +L ++  NQV++I GETG GKTTQIPQ++ E+
Sbjct: 202 KTAAEKAREGR---EF---LPIHGYREELLKLIEENQVLVIVGETGSGKTTQIPQYLQEA 255

Query: 327 EIEAVRGAACNIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFC 386
                RG    I CTQPRR++AMSV+ RVA E G KLG  VGY +R E      T I + 
Sbjct: 256 GYTK-RG---KIGCTQPRRVAAMSVASRVAQEVGVKLGHEVGYSIRFEDCTSEKTVIKYM 311

Query: 387 TTGILLRRLLADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLD 446
           T G+LLR LL +  L+  + +I+DE HER ++ D            RP+L+LI+ SATL+
Sbjct: 312 TDGMLLRELLIEPKLDSYSVIIIDEAHERTLSTDILFALVKDVAKVRPDLRLIISSATLE 371

Query: 447 AELFSSYFNGAPIMNIPGFTYPVRTYF 473
           A+ FS YF+ A I  IPG  YPV   F
Sbjct: 372 AKKFSEYFDSARIYLIPGRRYPVEKLF 398



 Score =  102 bits (255), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 116/227 (51%), Gaps = 9/227 (3%)

Query: 540 CWNPDCIGFSLIEYILCNICENERPGAVLVFMTGWDDISSLKEKLLRNNV-LGDP-NRVL 597
           C  PD +    +   +  I + E  G +LVF+TG ++I +++  L R  + LG   + ++
Sbjct: 401 CPEPDYL--ETVIRTVVQIHQTEAIGDILVFLTGQEEIETVETNLKRRMMDLGTKGSEII 458

Query: 598 LLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDAL 657
           +   + ++ +  Q  +FE    G RK+VLATNIAETS+TI+ V +V+D G  K  SY+  
Sbjct: 459 ICPIYSNLPTPLQAKVFEPAPKGTRKVVLATNIAETSLTIDGVKYVIDPGYCKINSYNPR 518

Query: 658 NNTPCLLPTWISKVSXXXXXXXXXXVQPGECYHLYPRCVYDAFAEYQLPEILRTPLQSLC 717
                LL T ISK S            PG+C+ LY   + D      +PEI R  L S+ 
Sbjct: 519 TGMESLLVTPISKASAAQRAGRSGRTGPGKCFRLYN--IKD-LEPTTIPEIQRANLASVV 575

Query: 718 LQIKSLRLGSISEFLSRALQSPEILAVQNAVEYLEIIGALDESENLT 764
           L +KSL +  +  F    +  P   A+  A+E L  +GALDE   +T
Sbjct: 576 LTLKSLGIQDVFNF--DFMDPPPENALLKALELLYALGALDEIGEIT 620


>AT1G26370.1 | Symbols:  | RNA helicase family protein |
           chr1:9122030-9125368 REVERSE LENGTH=717
          Length = 717

 Score =  161 bits (407), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 210/427 (49%), Gaps = 31/427 (7%)

Query: 562 ERPGAVLVFMTGWDDISSLKEKLLR---NNVLGDPNRVLLLACHGSMASSEQRLIFEEPE 618
           E+PG +LVF+TG D+I S+ E+L++    N+  D  ++L LA   ++ S +Q  +F    
Sbjct: 289 EKPGDILVFLTGQDEIESV-ERLVQERLQNIPEDKRKLLPLAIFSALPSEQQMKVFAPAP 347

Query: 619 DGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSXXXXXX 678
            G RK++LATNIAETSITI  + +V+D G  K  SYD       L     SK        
Sbjct: 348 TGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVVPASKAQTLQRSG 407

Query: 679 XXXXVQPGECYHLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGSISEFLSRALQS 738
                 PG+ + LYP   ++   +   PEI R  L ++ LQ+K+L +  I  F    +  
Sbjct: 408 RAGREGPGKSFRLYPEREFEKLEDSTKPEIKRCNLSNIILQLKALGIDDIVGF--DFIDK 465

Query: 739 PEILAVQNAVEYLEIIGAL-DESENLTILGRYLAMLPMEPKLGKMLILGAIFSCLDPILT 797
           P   A+  A+  L  +GAL D+ +    +G  ++ LP+EP   K LIL   F+CL+ +L 
Sbjct: 466 PSRGAIIKALAELHSLGALADDGKLENPVGYQMSRLPLEPVYSKALILANQFNCLEEMLI 525

Query: 798 VVAGLSVRDPFLAPMDKKDLADAAKSQFSGAYSDHLALLSAY-------EGWKDA----D 846
            VA LSV   F  P +K++ A  +K+ F+    DHL  LS Y       E  K A    +
Sbjct: 526 TVAVLSVESIFYDPREKREEARTSKNHFASVEGDHLTYLSVYRESDEFLEKRKAAGSGNN 585

Query: 847 IDLGGYEYCWKNFLSLQSMKAIDALRREFICLLKDIGLVDSNTASYNAWSYDVNLIRAVI 906
           ID    ++C +N+++ +S+K    + R+    ++ IG   S+  +      D+   R  +
Sbjct: 586 IDKIMKKWCKENYVNSRSLKHARDIYRQIREHVEQIGFNVSSCGN------DMLAFRRCL 639

Query: 907 CFGLYPGICSIVHNEKSFSLKTMEDGQVL-LYSNSVNARETTIPSPWLVFNEKIKVNSVF 965
               +         +   + + +E G+V+ ++  SV  R        ++FNE ++ +  +
Sbjct: 640 AASFF---LKAAQRQLDGTYRALESGEVVHIHPTSVLFRAK---PECVIFNELMQTSKKY 693

Query: 966 LRDSTAV 972
           +++ T +
Sbjct: 694 IKNLTII 700



 Score =  122 bits (306), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 116/234 (49%), Gaps = 44/234 (18%)

Query: 277 RRILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAAC 336
           ++I E R SLP    ++ ++  + +N ++II GETG GKTTQ+PQF+  +      G   
Sbjct: 32  QKIAEHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGF-CREGKMI 90

Query: 337 NIICTQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLL 396
            I  TQPRRI+A++V++RVA E   +LG+ VGY +R +      T + + T G+LLR  L
Sbjct: 91  GI--TQPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLREAL 148

Query: 397 ADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPE--------------------- 435
            D +L   + +IVDE H+R ++ D            R +                     
Sbjct: 149 LDPHLSRYSVIIVDEAHDRSVHTDVLLALLKKIQRTRSQPVSEKTEFGNVASQVQTTTRD 208

Query: 436 --------------------LKLILMSATLDAELFSSYFNGAPIMNIPGFTYPV 469
                               LKLI+MSA+LDA +FS YF GA  +++ G  +PV
Sbjct: 209 ANGPQQNGVLKGYQGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPV 262


>AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protein |
           chr1:12099738-12104108 REVERSE LENGTH=1237
          Length = 1237

 Score =  129 bits (325), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 127/242 (52%), Gaps = 30/242 (12%)

Query: 279 ILEFRSSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNI 338
           + E R  LP    ++ I+  ++R+  VIISG+TGCGKTTQ+PQF+ E+   + + ++ + 
Sbjct: 234 VEETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRSG 293

Query: 339 IC--TQPRRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLL 396
           I   TQPRR++ ++ ++RVA E G +LG+ VG++VR +   G ++ I F T GILLR + 
Sbjct: 294 IIGITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLREIQ 353

Query: 397 ADRNLEGVTHVIVDEIHERGMNEDFXXXXXXXXXXHRPE--------------------- 435
            D  L   + +I+DE HER +N D            R E                     
Sbjct: 354 NDFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQEYYEEQQKSLQSGGTVTSECQI 413

Query: 436 --LKLILMSATLDAELFSS----YFNGAPIMNIPGFTYPVRTYFLENILEMTGYRLTPYN 489
             LKLILMSATL  E F S    + N  P++ +P   YPV  +F +   E+  Y    Y 
Sbjct: 414 TPLKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKKT-EIVDYIGEAYK 472

Query: 490 QI 491
           ++
Sbjct: 473 KV 474



 Score =  120 bits (300), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 148/323 (45%), Gaps = 41/323 (12%)

Query: 593 PNRVLLLACHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKET 652
           P ++ +L  +  ++ + Q  +FEE E   R +V+ATN+AETS+TI  + +V+D G+ K  
Sbjct: 644 PGKLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVK 703

Query: 653 SYDALNNTPCLLPTWISKVSXXXXXXXXXXVQPGECYHLYPRCVY-DAFAEYQLPEILRT 711
           +YD+          WIS+ S            PG CY LY   V+ + F E  LPEI++ 
Sbjct: 704 NYDSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFEESSLPEIMKV 763

Query: 712 PLQSLCLQIKSLRLGSISEFLSRALQSPEILAVQNAVEYLEIIGALDESENLTILGRYLA 771
           P+  + L +KS+ +  +  F       PE  A++ A   L+ + ALD +  LT LG+ ++
Sbjct: 764 PVDGVILLMKSMNIPKVENFPFPT--PPEPSAIREAERCLKALEALDSNGGLTPLGKAMS 821

Query: 772 MLPMEPKLGKM------------------LILG------AIFSCLDPILTVVAGLSVRDP 807
             PM P+  +M                  LILG      A  S  +P++    G    + 
Sbjct: 822 HYPMSPRHSRMLLTVIQMLKETRNYSRANLILGYAVAAVAALSLPNPLIMEFEGEKKNES 881

Query: 808 FLA-----------PMDKKDLADAAKSQFSGAYSDHLALLSAYEGWKDADIDLGGYEYCW 856
             A             D+K+   AA+ +FS   SD L +  A   +   ++   G  +C 
Sbjct: 882 KDADKTVKQEDKQRKKDRKEKIKAARDRFSNPSSDALTVAYALHSF---EVSENGMGFCE 938

Query: 857 KNFLSLQSMKAIDALRREFICLL 879
            N L L++M  +  L+ + + L+
Sbjct: 939 ANGLHLKTMDEMSKLKDQLLRLV 961


>AT2G47680.1 | Symbols:  | zinc finger (CCCH type) helicase family
           protein | chr2:19545828-19550871 REVERSE LENGTH=1015
          Length = 1015

 Score =  105 bits (261), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/173 (35%), Positives = 96/173 (55%), Gaps = 10/173 (5%)

Query: 284 SSLPAYKEKEAILSILSRNQVVIISGETGCGKTTQIPQFILESEIEAVRGAACNIICTQP 343
           +SLP    K  I+  +  N+V +I GE GCGK++Q+PQF+LE+ +         I+CTQP
Sbjct: 24  ASLPIMAMKRRIIDKILENRVTLIVGEPGCGKSSQVPQFLLEANMAP-------ILCTQP 76

Query: 344 RRISAMSVSERVASERGEKLGESVGYKVRLEGVKGRDTHILFCTTGILLRRLLADRNLEG 403
           RR + ++V++ VA  R   LG  +GY +    +    + ILF T G+LL  +L D+ L  
Sbjct: 77  RRFAVVAVAKMVAKSRNSDLGGEIGYHIGHSKILTEGSKILFKTAGVLLDEML-DKGLNA 135

Query: 404 VTH--VIVDEIHERGMNEDFXXXXXXXXXXHRPELKLILMSATLDAELFSSYF 454
           + +  +I+DE+HER +  D              +L+++LMSAT D   +  YF
Sbjct: 136 LKYKVIILDEVHERSVESDLVLVCVKQFLMKNNDLRVVLMSATADITRYRDYF 188



 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 7/161 (4%)

Query: 622 RKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSXXXXXXXXX 681
           RK++LATNIAE+S+TI  V +V+D  ++ +  +D       +   W+S+           
Sbjct: 322 RKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDPSRKRDAVQLVWVSRSQAEQRRGRTG 381

Query: 682 XVQPGECYHLYPRCVYDAFAEYQLPEILRTPLQSLCLQI---KSLRLGSISEFLSRALQS 738
               GE Y L P   ++   E++ P IL+  L+   L I   +S  +   +  L++A+  
Sbjct: 382 RTCDGEVYRLVPSAFFNKLEEHEPPSILKLSLRQQVLHICCTESRAINDANALLAKAMDP 441

Query: 739 PEILAVQNAVEYLEIIGALDESE----NLTILGRYLAMLPM 775
           P+   V +A+  L  I AL +S       T  GR LA  P+
Sbjct: 442 PDPDVVDDALRMLLSIQALRKSPRGRYEPTFYGRLLASFPL 482


>AT5G14900.1 | Symbols:  | helicase associated (HA2)
           domain-containing protein | chr5:4822676-4823581 REVERSE
           LENGTH=301
          Length = 301

 Score = 95.5 bits (236), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 135/264 (51%), Gaps = 14/264 (5%)

Query: 711 TPLQSLCLQIKSLRLGSISEFLSRALQSPEILAVQNAVEYLEIIGALDESENLTILGRYL 770
           T L +  L +K L + ++  F      +P+ LA   A++ L  +GALD+  NLT  G  +
Sbjct: 2   TNLANTVLTLKGLSVKNLVRFDLIDSPAPDTLA--RALDDLYHLGALDDDCNLTKTGEMM 59

Query: 771 AMLPMEPKLGKMLILGAIFSCLDPILTVVAGLSVRDPFLAPM-DKKDLADAAKSQFSGAY 829
           +  P++P++ KMLI+   F+C + IL++ A LSV + F+ P  + +  AD AKS F+   
Sbjct: 60  SEFPLDPQMAKMLIVSPQFNCSNEILSISAMLSVPNCFIRPRGEAQKAADEAKSSFAHID 119

Query: 830 SDHLALLSAYEGWKDADIDLGGYEYCWKNFLSLQSMKAIDALRREFICLLKDIGLVDSNT 889
            DHL LL+ +  +   + D     +C   F++ ++MK+  ++R + + ++     +   +
Sbjct: 120 GDHLTLLNLFHAFLQNNQDPN---WCCTKFINYRAMKSAVSVREQLVRIMLRFQ-IKLCS 175

Query: 890 ASYNAWSYDVNLIRAVICFGLYPGICSIVHNEKSFSLKTMEDGQVLLY-SNSVNARETTI 948
             +N+  Y VN IR  +  G +  +  +       + +  +D  V L+ SN ++ +    
Sbjct: 176 PDFNSRDYYVN-IRKALLAGYFMQVAHLERTGHYLTFRDKDDQVVHLHPSNCLDHK---- 230

Query: 949 PSPWLVFNEKIKVNSVFLRDSTAV 972
              W+V+NE +  +  F+R  T +
Sbjct: 231 -PEWVVYNEYVFTSRNFIRTVTHI 253