Miyakogusa Predicted Gene

Lj5g3v2169490.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2169490.1 CUFF.56826.1
         (416 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G01120.1 | Symbols: ORC4, ATORC4 | origin recognition complex...   566   e-161
AT2G01120.2 | Symbols: ORC4 | origin recognition complex subunit...   559   e-159
AT4G14700.1 | Symbols: ATORC1A, ORC1A | origin recognition compl...    49   9e-06

>AT2G01120.1 | Symbols: ORC4, ATORC4 | origin recognition complex
           subunit 4 | chr2:85444-88027 FORWARD LENGTH=418
          Length = 418

 Score =  566 bits (1458), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 273/415 (65%), Positives = 334/415 (80%), Gaps = 2/415 (0%)

Query: 1   MEGEDHKMKTLNLLRSRICDPKFIFSD-SSSDEGNYSKLKFMISSSVTEACNNSILLLGP 59
           M  E    K+LNL+R R+CDP ++F   S+S + NYSKLKF++S+S+TE CNNS+LLLGP
Sbjct: 1   MGKETPAEKSLNLIRGRLCDPSYVFRPLSASSDSNYSKLKFIVSTSITEGCNNSMLLLGP 60

Query: 60  RGSGKLAVLELVIQDLFQQYPESLSLIRLNGFLHCDDISAFKEIARQLCMDHQLLFSKSA 119
           RGSGK AVL+L    L +Q+P+S+S+IRLNG LH DD  AFKEIA+QLCM+H LLFSK A
Sbjct: 61  RGSGKAAVLDLXXGXLLEQFPDSVSVIRLNGLLHSDDNCAFKEIAKQLCMEHHLLFSKMA 120

Query: 120 SFDDNSQFMVAMLKECGLAHKTIIFILDEFDLFAQGKQRLLYSLLD-AMQSVTSQAVVIG 178
           SFDDNSQF++AML+ CGLAHKTIIF+LDEFD+FAQGKQRLLYS LD AMQSVTSQAVV+G
Sbjct: 121 SFDDNSQFIIAMLRACGLAHKTIIFVLDEFDMFAQGKQRLLYSXLDDAMQSVTSQAVVVG 180

Query: 179 ISCRLDADQLLEKRVRSRFSHRKLLFLPPSIEDSQRLLVHMLNLPIDSSFPHDYAVEFNR 238
           IS RLDADQLLEKRVRSRFSHRK LFLPPS E+   L VH+L+LP DS FP  Y   FN 
Sbjct: 181 ISSRLDADQLLEKRVRSRFSHRKFLFLPPSREELDGLFVHLLSLPADSGFPSGYVSRFND 240

Query: 239 KVQNIIEDRRFKDTFNKYLSLDSSVKHLLRFLFCAVSHMDLKTGFLSPENFETAFSSIQR 298
           K++N+  D RFKD      + +S+V   L+F+FCAVS M+L++G LS ENF+ A SS+QR
Sbjct: 241 KIKNLTSDTRFKDILKTLFNANSTVNSFLKFIFCAVSLMNLESGLLSLENFKAALSSMQR 300

Query: 299 QPKLECLKSCSILELYILVCMKRLEVKEQSLCNFNAVMKEYKSVHDSFKTADYYARNVCL 358
           QPKLE ++ CS+LELY+LVCM+RLEVKEQS  NF +VMKEYK++HDSF T+DYYA+NVCL
Sbjct: 301 QPKLEAVRDCSVLELYLLVCMRRLEVKEQSSYNFISVMKEYKAIHDSFHTSDYYAQNVCL 360

Query: 359 RAFEHLIHRELICYTDNRGQSLSAEFRPAKLLISPPELHQGLKAYPSCPPILQKL 413
           RAFEHL  R++ICY +NRGQS + E+R  KLLIS  ELHQG++++  CP IL KL
Sbjct: 361 RAFEHLRERQVICYAENRGQSQTGEYRLQKLLISASELHQGMRSHACCPAILLKL 415


>AT2G01120.2 | Symbols: ORC4 | origin recognition complex subunit 4
           | chr2:85444-88027 FORWARD LENGTH=424
          Length = 424

 Score =  559 bits (1440), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 273/421 (64%), Positives = 334/421 (79%), Gaps = 8/421 (1%)

Query: 1   MEGEDHKMKTLNLLRSRICDPKFIFSD-SSSDEGNYSKLKFMISSSVTEACNNSILLLGP 59
           M  E    K+LNL+R R+CDP ++F   S+S + NYSKLKF++S+S+TE CNNS+LLLGP
Sbjct: 1   MGKETPAEKSLNLIRGRLCDPSYVFRPLSASSDSNYSKLKFIVSTSITEGCNNSMLLLGP 60

Query: 60  RGSGKLAVLELVIQDLFQQYPESLSLIRLNGFLHCDDISAFKEIARQLCMDHQLLFSKSA 119
           RGSGK AVL+L    L +Q+P+S+S+IRLNG LH DD  AFKEIA+QLCM+H LLFSK A
Sbjct: 61  RGSGKAAVLDLXXGXLLEQFPDSVSVIRLNGLLHSDDNCAFKEIAKQLCMEHHLLFSKMA 120

Query: 120 SFDDNSQFMVAMLKECGLAHKTIIFILDEFDLFAQGKQRLLYSLL-DAMQSVTSQAVVIG 178
           SFDDNSQF++AML+ CGLAHKTIIF+LDEFD+FAQGKQRLLYS L DAMQSVTSQAVV+G
Sbjct: 121 SFDDNSQFIIAMLRACGLAHKTIIFVLDEFDMFAQGKQRLLYSXLDDAMQSVTSQAVVVG 180

Query: 179 ISCRLDADQLLEKRVRSRFSHRKLLFLPPSIEDSQRLLVHMLNLPIDSSFPHDYAVEFNR 238
           IS RLDADQLLEKRVRSRFSHRK LFLPPS E+   L VH+L+LP DS FP  Y   FN 
Sbjct: 181 ISSRLDADQLLEKRVRSRFSHRKFLFLPPSREELDGLFVHLLSLPADSGFPSGYVSRFND 240

Query: 239 KVQNIIEDRRFKDTFNKYLSLDSSVKHLLRFL------FCAVSHMDLKTGFLSPENFETA 292
           K++N+  D RFKD      + +S+V   L+F+      FCAVS M+L++G LS ENF+ A
Sbjct: 241 KIKNLTSDTRFKDILKTLFNANSTVNSFLKFILSLDVRFCAVSLMNLESGLLSLENFKAA 300

Query: 293 FSSIQRQPKLECLKSCSILELYILVCMKRLEVKEQSLCNFNAVMKEYKSVHDSFKTADYY 352
            SS+QRQPKLE ++ CS+LELY+LVCM+RLEVKEQS  NF +VMKEYK++HDSF T+DYY
Sbjct: 301 LSSMQRQPKLEAVRDCSVLELYLLVCMRRLEVKEQSSYNFISVMKEYKAIHDSFHTSDYY 360

Query: 353 ARNVCLRAFEHLIHRELICYTDNRGQSLSAEFRPAKLLISPPELHQGLKAYPSCPPILQK 412
           A+NVCLRAFEHL  R++ICY +NRGQS + E+R  KLLIS  ELHQG++++  CP IL K
Sbjct: 361 AQNVCLRAFEHLRERQVICYAENRGQSQTGEYRLQKLLISASELHQGMRSHACCPAILLK 420

Query: 413 L 413
           L
Sbjct: 421 L 421


>AT4G14700.1 | Symbols: ATORC1A, ORC1A | origin recognition complex
           1 | chr4:8422236-8424665 FORWARD LENGTH=809
          Length = 809

 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 11/182 (6%)

Query: 139 HKTIIFILDEFDLFAQGKQRLLYSLLDAMQSVTSQAVVIGISCRLDADQLLEKRVRSRFS 198
            K  I ++DE D+     Q +LY++LD      S+ VV+GI+  +D  + L  R+ SR  
Sbjct: 548 EKPCILLIDELDVLVTRNQSVLYNILDWPTKPNSKLVVLGIANTMDLPEKLLPRISSRMG 607

Query: 199 HRKLLFLPPSIEDSQRLLVHMLNLPIDSSFPHDYAVEF-NRKVQNIIEDRRFKDTFNKYL 257
            ++L F P +    Q ++   L     ++F    A+EF +RKV  I  D R      + L
Sbjct: 608 IQRLCFGPYNHRQLQEIISTRLEG--INAF-EKTAIEFASRKVAAISGDAR------RAL 658

Query: 258 SLDSSVKHLLRFLFCAVSHMDLKTGFLSPENFETAFSSIQRQPKLECLKSCSILELYILV 317
            +      +  +     S++  K+  +   + E A   + + P ++ +KS S L    L 
Sbjct: 659 EICRRAAEVADYRL-KKSNISAKSQLVIMADVEVAIQEMFQAPHIQVMKSVSKLSRIFLT 717

Query: 318 CM 319
            M
Sbjct: 718 AM 719