Miyakogusa Predicted Gene

Lj5g3v2169480.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2169480.1 Non Chatacterized Hit- tr|I1NFR9|I1NFR9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.58359
PE,81.53,0,seg,NULL; tatC: twin arginine-targeting protein translocase
,Sec-independent periplasmic protein tra,CUFF.56821.1
         (346 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G01110.1 | Symbols: APG2, UNE3, PGA2, TATC | Sec-independent ...   390   e-109

>AT2G01110.1 | Symbols: APG2, UNE3, PGA2, TATC | Sec-independent
           periplasmic protein translocase | chr2:83786-85088
           REVERSE LENGTH=340
          Length = 340

 Score =  390 bits (1002), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 203/319 (63%), Positives = 235/319 (73%), Gaps = 5/319 (1%)

Query: 32  SARNRRSSLAGFVCFXXXXXXXRQNQQPLSTTATGPASALEERPA----TDLLNSTTEET 87
           S   +R   A   C        R +     +   GP SAL +  +    T  + S  E+ 
Sbjct: 23  SPTKQRCPYAVTFCNSWREAGLRYSVTQRRSKGFGPVSALNDDDSPTETTPGVGSAVEDR 82

Query: 88  LGNLEQDGEKGALYDFLYPSKELLPDDKEMSIFDHLEELRQRIFVSVLVVGASILGCFAY 147
             +  +D    ++Y+FLYP KE LPDDKEM+IFDHLEELR+RIFVSVL VGA+ILGCFA+
Sbjct: 83  PPDSSED-RSSSVYEFLYPRKEELPDDKEMTIFDHLEELRERIFVSVLAVGAAILGCFAF 141

Query: 148 SKELVKLLEAPVKSEGVKFLQLAPGEFFFTTLKVSGYSGILLGSPIILYEIIAFVLPGLT 207
           SK+L+  LEAPVK++GV+FLQLAPGEFFFTTLKVSGY G+LLGSP+ILYEIIAFVLPGLT
Sbjct: 142 SKDLIVFLEAPVKTQGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLT 201

Query: 208 KSERRFLGPIVLGSSVLFYAGIAFSYLVLTPAALNFFVDYAEGAVESLWSIDQYFEFVLV 267
           ++ERRFLGPIV GSS+LFYAG+AFSY VLTPAALNFFV+YAEG VESLWSIDQYFEFVLV
Sbjct: 202 RAERRFLGPIVFGSSLLFYAGLAFSYWVLTPAALNFFVNYAEGVVESLWSIDQYFEFVLV 261

Query: 268 LMFSTGLSFQVPVIQFLLGQVGLVSGDQMLSVWRYXXXXXXXXXXXXTPSTDPLTQVXXX 327
           LMFSTGLSFQVPVIQ LLGQVG+VSGDQMLS+WRY            TPSTDP+TQ+   
Sbjct: 262 LMFSTGLSFQVPVIQLLLGQVGVVSGDQMLSIWRYVVVGAVVAAAVVTPSTDPVTQMLLA 321

Query: 328 XXXXXXXXXXAWAVKLTGR 346
                     AW VKLTGR
Sbjct: 322 TPLLGLYLGGAWMVKLTGR 340