Miyakogusa Predicted Gene
- Lj5g3v2167310.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2167310.1 Non Chatacterized Hit- tr|I1KMY6|I1KMY6_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,55.95,0.000000000000004,FAMILY NOT NAMED,NULL; FBOX,F-box domain,
cyclin-like; F-box-like,NULL; no description,NULL; A
Recep,CUFF.56798.1
(86 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G23880.1 | Symbols: | F-box and associated interaction domai... 57 2e-09
AT3G24700.1 | Symbols: | F-box and associated interaction domai... 56 5e-09
AT3G17710.1 | Symbols: | F-box and associated interaction domai... 55 8e-09
AT3G17280.1 | Symbols: | F-box and associated interaction domai... 54 2e-08
AT3G16210.1 | Symbols: | F-box family protein | chr3:5494533-54... 54 3e-08
AT1G51320.1 | Symbols: | F-box and associated interaction domai... 54 3e-08
AT3G17540.1 | Symbols: | F-box and associated interaction domai... 53 4e-08
AT3G17530.1 | Symbols: | F-box and associated interaction domai... 53 5e-08
AT1G47790.1 | Symbols: | F-box and associated interaction domai... 52 6e-08
AT2G02030.1 | Symbols: | F-box family protein | chr2:482335-483... 52 7e-08
AT3G51171.1 | Symbols: | F-box and associated interaction domai... 51 1e-07
AT1G30790.1 | Symbols: | F-box and associated interaction domai... 51 2e-07
AT3G21120.1 | Symbols: | F-box and associated interaction domai... 51 2e-07
AT1G50870.1 | Symbols: | F-box and associated interaction domai... 50 3e-07
AT3G06240.1 | Symbols: | F-box family protein | chr3:1887336-18... 50 3e-07
AT1G58090.1 | Symbols: | F-box and associated interaction domai... 50 4e-07
AT3G19560.1 | Symbols: | F-box family protein | chr3:6793717-67... 50 4e-07
AT3G47150.1 | Symbols: | F-box and associated interaction domai... 49 6e-07
AT3G17490.1 | Symbols: | F-box and associated interaction domai... 49 7e-07
AT3G61340.1 | Symbols: | F-box and associated interaction domai... 49 7e-07
AT3G17570.1 | Symbols: | F-box and associated interaction domai... 49 7e-07
AT4G19940.1 | Symbols: | F-box and associated interaction domai... 48 1e-06
AT1G51290.1 | Symbols: | F-box and associated interaction domai... 48 1e-06
AT3G44130.1 | Symbols: | F-box and associated interaction domai... 48 1e-06
AT5G36730.1 | Symbols: | F-box and associated interaction domai... 48 1e-06
AT5G36820.1 | Symbols: | F-box and associated interaction domai... 48 1e-06
AT1G11620.1 | Symbols: | F-box and associated interaction domai... 48 1e-06
AT3G52320.1 | Symbols: | F-box and associated interaction domai... 48 1e-06
AT3G59610.1 | Symbols: | F-box family protein / jacalin lectin ... 48 2e-06
AT2G16810.1 | Symbols: | F-box and associated interaction domai... 48 2e-06
AT1G47340.1 | Symbols: | F-box and associated interaction domai... 47 2e-06
AT5G62660.1 | Symbols: | F-box and associated interaction domai... 47 2e-06
AT5G49610.1 | Symbols: | F-box family protein | chr5:20131448-2... 47 2e-06
AT3G10430.1 | Symbols: | F-box and associated interaction domai... 47 2e-06
AT3G16555.1 | Symbols: | F-box family protein | chr3:5633426-56... 47 2e-06
AT1G12870.1 | Symbols: | F-box and associated interaction domai... 47 3e-06
AT3G17480.1 | Symbols: | F-box and associated interaction domai... 47 3e-06
AT3G19410.1 | Symbols: | F-box and associated interaction domai... 47 3e-06
AT1G33530.1 | Symbols: | F-box family protein | chr1:12159884-1... 47 3e-06
AT1G47765.1 | Symbols: | F-box and associated interaction domai... 46 5e-06
AT4G09190.1 | Symbols: | F-box and associated interaction domai... 46 6e-06
AT3G17270.1 | Symbols: | F-box family protein | chr3:5902479-59... 46 6e-06
AT3G08750.1 | Symbols: | F-box and associated interaction domai... 46 6e-06
AT1G13200.1 | Symbols: | F-box and associated interaction domai... 45 7e-06
AT2G41473.1 | Symbols: | F-box family protein | chr2:17294453-1... 45 9e-06
AT3G25460.1 | Symbols: | F-box and associated interaction domai... 45 9e-06
>AT3G23880.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:8622061-8623155
REVERSE LENGTH=364
Length = 364
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/43 (60%), Positives = 31/43 (72%)
Query: 6 HHLPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSH 48
H+LP +++ ILLRLPVKSL R K VC WRSLIS+ FA H
Sbjct: 12 HNLPLEMMEEILLRLPVKSLTRFKCVCSSWRSLISETLFALKH 54
>AT3G24700.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:9022281-9023030
FORWARD LENGTH=249
Length = 249
Score = 55.8 bits (133), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%)
Query: 8 LPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELATPRLVFNTKLGIQTM 67
LP DL + IL R+P SL R+K CK W +L DP F K + A ++F+ + G
Sbjct: 5 LPLDLESEILSRVPATSLQRLKTTCKRWYALFRDPRFVKKNLGKAATHVIFDNRSGYSMT 64
Query: 68 DLDGWLHS 75
D++ +HS
Sbjct: 65 DINSLIHS 72
>AT3G17710.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:6055597-6056703
FORWARD LENGTH=368
Length = 368
Score = 55.5 bits (132), Expect = 8e-09, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 8 LPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELATPRLVFNTK 61
LP DL IL RLP +SL+R + VCK W L SD F K H A P+ +F T+
Sbjct: 6 LPWDLEEEILSRLPPRSLVRFRTVCKHWNGLFSDKRFVKKHLVRARPQFIFLTE 59
>AT3G17280.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:5903453-5904613
REVERSE LENGTH=386
Length = 386
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 3 TQIHHLPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELATPRLVFNTKL 62
T I LP DL+ IL RLP KS+ ++K CK W +L DP F + A VF
Sbjct: 2 TTISDLPYDLLPEILSRLPTKSIPKLKTTCKKWYALFKDPKFVEKKLGKAARETVFLMNH 61
Query: 63 GIQTMDLDGWLHSNPISEPINVDF 86
+ ++ +D +H P +++DF
Sbjct: 62 EVNSISVD--IHGIPKGYSVSMDF 83
>AT3G16210.1 | Symbols: | F-box family protein |
chr3:5494533-5495615 REVERSE LENGTH=360
Length = 360
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 8 LPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELATPRLVFNTKLGIQTM 67
LP++L IL+RL +K L R + VCK WR LI+DP F +++ +++ + V +
Sbjct: 5 LPEELAIEILVRLSMKDLARFRCVCKTWRDLINDPGFTETYRDMSPAKFVSFYDKNFYML 64
Query: 68 DLDG 71
D++G
Sbjct: 65 DVEG 68
>AT1G51320.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:19025642-19026769
FORWARD LENGTH=375
Length = 375
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 7 HLPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELATPRLVFNTKLGIQT 66
+LP +L+ IL R+P +SL++ + VCK W SL D F H+ + P+L+F T+ I +
Sbjct: 5 NLPWELVEEILCRVPPQSLVKFRTVCKQWNSLFDDNKFVNDHFVQSQPQLIFRTESKIYS 64
Query: 67 M 67
+
Sbjct: 65 V 65
>AT3G17540.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:6002783-6003973
FORWARD LENGTH=396
Length = 396
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 5 IHHLPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELATPRLVFNTKLGI 64
I LP ++ + IL R+P KSL ++ CK W +L DP F K ++ + RL+ ++ G+
Sbjct: 7 ISDLPHEIESEILSRVPTKSLAKLHTTCKRWYALFRDPRFVKKNFGKSERRLMLHSNFGV 66
Query: 65 Q--TMDLDGWLHS 75
T DL G L+S
Sbjct: 67 YKITDDLHGILNS 79
>AT3G17530.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:6000860-6002026
FORWARD LENGTH=388
Length = 388
Score = 52.8 bits (125), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 5 IHHLPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELATPR---LVFNTK 61
I LP DL + IL R+P KSL + K CK W +L DP F K +++ A R ++ N++
Sbjct: 3 ISDLPHDLESEILSRVPAKSLAKWKTTCKRWYALFRDPSFVKKNFDKAGGREMIVLMNSR 62
Query: 62 LGIQTMDLDG 71
+ +++L G
Sbjct: 63 VYSNSVNLQG 72
>AT1G47790.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:17600004-17601173
REVERSE LENGTH=389
Length = 389
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 8 LPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELATPR 55
P DL + ILLRLPVKS++R + V K W S+I+DP+F K++ ++ R
Sbjct: 25 FPLDLASEILLRLPVKSVVRFRCVSKLWSSIITDPYFIKTYETQSSTR 72
>AT2G02030.1 | Symbols: | F-box family protein |
chr2:482335-483829 FORWARD LENGTH=334
Length = 334
Score = 52.0 bits (123), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 7 HLPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELATPR 55
H+P +++ IL+RLPVKSL R + V K WR+LI+ +F K H L +
Sbjct: 38 HIPNEIVEEILVRLPVKSLTRFQTVSKHWRTLITSKYFGKRHMALEKSK 86
>AT3G51171.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:19010856-19011626
FORWARD LENGTH=256
Length = 256
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 8 LPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELATPRLVFNTKLGIQTM 67
LP +L IL RL +SL+R ++VCK W L + F K+H+ A P+ +F T I ++
Sbjct: 4 LPWELEEDILSRLAAQSLVRFRSVCKRWNYLFDEKSFIKNHFARACPQFIFMTDSNIYSI 63
Query: 68 DLDG 71
++ G
Sbjct: 64 EIIG 67
>AT1G30790.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:10932713-10933912
FORWARD LENGTH=399
Length = 399
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 4 QIHHLPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELATPRLVF 58
+I H+P DL IL RLP KSL++ K V K W S+I + F S Y +++ R F
Sbjct: 5 EIDHIPFDLTVEILTRLPAKSLMKFKCVSKLWSSIIHNQSFIDSFYSISSTRPRF 59
>AT3G21120.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:7406326-7407429
FORWARD LENGTH=367
Length = 367
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 7 HLPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELATPR------LVFNT 60
HLP+DL+ IL ++P SL R ++ C+ W +L+ D FAK HY PR ++
Sbjct: 2 HLPEDLVLEILSKVPAVSLARFRSTCRRWNALVVDGSFAKKHYAYG-PRQYPIVIMLIEF 60
Query: 61 KLGIQTMDLDGWLHSN 76
++ + ++DL G ++N
Sbjct: 61 RVYLVSIDLHGINNNN 76
>AT1G50870.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:18855147-18856337
FORWARD LENGTH=396
Length = 396
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%)
Query: 9 PQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELATPR 55
P DLI ILLRLPVKS+LR + V K W S +DP+F S+ ++ R
Sbjct: 32 PLDLILEILLRLPVKSVLRFRCVSKLWLSTTTDPYFTNSYEARSSTR 78
>AT3G06240.1 | Symbols: | F-box family protein |
chr3:1887336-1888619 FORWARD LENGTH=427
Length = 427
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 8 LPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYEL 51
LP ++IT ILLRLP KS+ R + V K + +L SDP FAK H +L
Sbjct: 36 LPPEIITEILLRLPAKSIGRFRCVSKLFCTLSSDPGFAKIHLDL 79
>AT1G58090.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:21510510-21511625
FORWARD LENGTH=371
Length = 371
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 8 LPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELATPRLVFNTKLGIQTM 67
LP DL IL R+P +SL+R ++VC+ W +L + F ++ P ++ NT I ++
Sbjct: 6 LPLDLEEEILFRVPPRSLVRFRSVCREWNTLFKNKRFINKNFACGRPEIMLNTHSHIYSI 65
Query: 68 DLD 70
+D
Sbjct: 66 SVD 68
>AT3G19560.1 | Symbols: | F-box family protein |
chr3:6793717-6794802 FORWARD LENGTH=361
Length = 361
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 3 TQIHHLPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSH 48
T + + QDL+ IL R+P+ SL VK+ CK W+ L++DP F+K +
Sbjct: 4 TMMSDISQDLLEEILSRVPITSLRAVKSTCKRWKDLLNDPSFSKKY 49
>AT3G47150.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:17358591-17359765
FORWARD LENGTH=360
Length = 360
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 37/59 (62%), Gaps = 5/59 (8%)
Query: 3 TQIHHLPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYEL----ATPRLV 57
TQI+ +P DL ILLRLPVKSLLR + V K W S+I+ F H+ + A PRL+
Sbjct: 8 TQIY-IPLDLQINILLRLPVKSLLRFRCVSKLWCSIITSHDFRNRHFNITSSSAPPRLL 65
>AT3G17490.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:5984827-5985993
FORWARD LENGTH=388
Length = 388
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 14/81 (17%)
Query: 7 HLPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELATPRLVFNTKLGIQT 66
HL +DL+ IL R+P SL R++ CK W +L +D F+K H + A P+ T LG+
Sbjct: 5 HLSEDLVEEILSRVPAISLKRLRYTCKQWNALFNDQRFSKKHRDKA-PK----TYLGLTL 59
Query: 67 MD---------LDGWLHSNPI 78
D L G LH+N I
Sbjct: 60 KDFRIYSMSSNLHGLLHNNNI 80
>AT3G61340.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:22701215-22702447
REVERSE LENGTH=410
Length = 410
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 2 ETQIHHLPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELAT--PRLVFN 59
E + +P DL+ ILLRLPVKS+ R + V K W+S + HF +S+ +++ P+++F
Sbjct: 17 EEKSERIPFDLVIEILLRLPVKSIARFRYVSKLWQSTLRGQHFTESYLTISSSRPKILFT 76
Query: 60 TKLGIQTM 67
+T
Sbjct: 77 CLKDCETF 84
>AT3G17570.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:6009413-6010558
FORWARD LENGTH=381
Length = 381
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 26/41 (63%)
Query: 8 LPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSH 48
LP+DL T IL R+P SL ++K CK W +L DP F K H
Sbjct: 5 LPRDLETEILSRVPATSLQKLKPTCKRWYTLFKDPEFLKKH 45
>AT4G19940.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr4:10806195-10807430
FORWARD LENGTH=411
Length = 411
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 5 IHHLPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELATPRLVF 58
I +P DL+ IL RLP KSL+R K+V K W SLI +F +L++P +F
Sbjct: 32 IPEIPFDLVIEILTRLPAKSLMRFKSVSKLWSSLICSRNFTNRLLKLSSPPRLF 85
>AT1G51290.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:19012173-19013306
FORWARD LENGTH=377
Length = 377
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 7 HLPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELATPRLVFNT 60
+LP +L+ IL R+P +SL R + VCK W SL D F H + P+ +F T
Sbjct: 5 NLPWELVEEILYRVPPQSLARFRTVCKQWNSLFDDNKFVNDHLVRSRPQFMFRT 58
>AT3G44130.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:15881870-15883638
FORWARD LENGTH=313
Length = 313
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 7 HLPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELATPRLVF--NTKL-G 63
+LP +L IL RLP+ SL+R+++VCK W +D F K A P+ + +K+
Sbjct: 5 NLPWELEEEILCRLPLGSLVRLRSVCKHWNDFFNDKWFIKKSLGCARPQFIILPESKIYS 64
Query: 64 IQTMDLDG 71
I T+ LDG
Sbjct: 65 IGTIGLDG 72
>AT5G36730.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr5:14436317-14437549
FORWARD LENGTH=410
Length = 410
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 5 IHHLPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHY--ELATPRLVFNTKL 62
+ +LP+DL+ +L R+PVKS+ V++ CK W SL F K Y +AT F L
Sbjct: 3 MSNLPRDLLEEVLSRVPVKSIAAVRSTCKNWNSLTYGQSFTKKLYGKTMATKEKEF---L 59
Query: 63 GIQTMDLDGWL 73
+ TMDL+ +L
Sbjct: 60 VVMTMDLEVYL 70
>AT5G36820.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr5:14495617-14496849
FORWARD LENGTH=410
Length = 410
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 5 IHHLPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHY--ELATPRLVFNTKL 62
+ +LP+DL+ +L R+PVKS+ V++ CK W SL F K Y +AT F L
Sbjct: 3 MSNLPRDLLEEVLSRVPVKSIAAVRSTCKNWNSLTYGQSFTKKLYGKTMATKEKEF---L 59
Query: 63 GIQTMDLDGWL 73
+ TMDL+ +L
Sbjct: 60 VVMTMDLEVYL 70
>AT1G11620.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:3910833-3911924
FORWARD LENGTH=363
Length = 363
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 8 LPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSH 48
L DL+ IL R+P +SL+R+++ CK W +LI++P F H
Sbjct: 6 LSSDLVEEILSRVPARSLVRLRSTCKQWEALIAEPRFVNKH 46
>AT3G52320.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:19403020-19404192
REVERSE LENGTH=390
Length = 390
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 7 HLPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELATPRLVF 58
+P++++ IL+RLP KSL+R K V K W SLI+ +F ++ ++P +F
Sbjct: 26 EIPEEMLIDILIRLPAKSLMRFKCVSKLWLSLITSRYFTNRFFKPSSPSCLF 77
>AT3G59610.1 | Symbols: | F-box family protein / jacalin lectin
family protein | chr3:22019553-22021199 FORWARD
LENGTH=521
Length = 521
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 6 HHLPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELATPRLVFNTKLGIQ 65
H LP DL IL LP++ L R + VCK W +L + F S LA P+ + + I
Sbjct: 6 HDLPYDLEGEILSHLPIQILARFRCVCKRWNTLFKERRFFNSDLGLARPQFILLAESKIC 65
Query: 66 TMD--LDG 71
++D LDG
Sbjct: 66 SVDVNLDG 73
>AT2G16810.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr2:7287944-7288831
REVERSE LENGTH=295
Length = 295
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 6 HHLPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAK 46
++PQDL+ IL RLP KS++R K V KFW SL+S +F
Sbjct: 39 RYIPQDLLIEILTRLPPKSVMRFKCVSKFWSSLLSSRYFCN 79
>AT1G47340.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:17354123-17356494
REVERSE LENGTH=459
Length = 459
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 8 LPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAK---SHYELATPRLVF 58
LP++LI IL RLP KS+ R V K W S++S PHF + + A PRL+F
Sbjct: 37 LPKELILEILKRLPAKSVKRFHCVSKQWASMLSCPHFRELFLTRSSSAQPRLLF 90
>AT5G62660.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr5:25156326-25157465
REVERSE LENGTH=379
Length = 379
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 7 HLPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELATPR 55
+P DL+ IL +LP KSL+R K V K W SLI F+ + + TPR
Sbjct: 40 EIPLDLLIEILTKLPAKSLMRFKCVSKLWSSLIRSRFFSNCYLTVKTPR 88
>AT5G49610.1 | Symbols: | F-box family protein |
chr5:20131448-20132527 REVERSE LENGTH=359
Length = 359
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 8 LPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELA 52
P ++I +IL RLPVKSL R K+VCK W L SD +F +L+
Sbjct: 9 FPDEVILQILARLPVKSLFRFKSVCKSWYRLPSDKYFTSLFNQLS 53
>AT3G10430.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:3242750-3243862
REVERSE LENGTH=370
Length = 370
Score = 47.0 bits (110), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 8 LPQDLITRILLRLPVKSLLRVKAVCKFWRSLIS-DPHFAKSHYELATPR-LVFNTKLGIQ 65
LP DLI IL R P +SLLR K+ CK W LIS D F H + +T R L + +Q
Sbjct: 5 LPFDLILEILQRTPAESLLRFKSTCKKWYELISNDKRFMYKHLDKSTKRFLRIENRERVQ 64
Query: 66 TMD 68
+D
Sbjct: 65 ILD 67
>AT3G16555.1 | Symbols: | F-box family protein |
chr3:5633426-5634542 FORWARD LENGTH=349
Length = 349
Score = 47.0 bits (110), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 8 LPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELATPRLVFNTKLGIQTM 67
LP +L IL RLP +SL++ ++VCK W +L F K + A P+ +F T I ++
Sbjct: 4 LPWELEEDILSRLPPRSLVQFRSVCKRWNALFDVKSFNKDQFARARPQFIFITDSKIYSI 63
Query: 68 DLDG 71
++ G
Sbjct: 64 EIIG 67
>AT1G12870.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:4387129-4389110
REVERSE LENGTH=416
Length = 416
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 8 LPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELATPRLVFNTKLGIQT 66
LP D++ I L+LPVK+L+R K++ K WRS + +F++ H ++A V + K+ I T
Sbjct: 33 LPDDVVEEIFLKLPVKALMRFKSLSKQWRSTLESCYFSQRHLKIAERSHVDHPKVMIIT 91
>AT3G17480.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:5983199-5984320
FORWARD LENGTH=373
Length = 373
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 8 LPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELATPR----LVFNTKLG 63
L +DL+ IL R+P SL+R+++ CK W ++++D F K H++ A L+ + ++
Sbjct: 11 LTEDLVEDILSRVPATSLVRLRSTCKQWNAILNDRRFIKKHFDTAEKEYLDMLLRSLRVS 70
Query: 64 IQTMDLDGWLHSN 76
+++L G LH N
Sbjct: 71 SMSVNLHG-LHDN 82
>AT3G19410.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:6729585-6730706
FORWARD LENGTH=373
Length = 373
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 5 IHHLPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDP-HFAKSHYELAT----PRLVFN 59
I LP+DLI IL +P L R+++ CK W L D FAK HY+ A P + N
Sbjct: 3 IPELPKDLIEEILCYVPATYLKRLRSTCKGWNRLFKDDRRFAKKHYDKAAKQFLPLMSTN 62
Query: 60 TKLGIQTMDLDGWLHS 75
+L +++L G + S
Sbjct: 63 EELCAMSVNLHGTIPS 78
>AT1G33530.1 | Symbols: | F-box family protein |
chr1:12159884-12161314 FORWARD LENGTH=441
Length = 441
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 7 HLPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYEL 51
LP L+ IL RLPVK L+R+K++ K W+SLI H A+ H L
Sbjct: 96 ELPDVLVEEILQRLPVKYLVRLKSISKGWKSLIESDHLAEKHLRL 140
>AT1G47765.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:17574906-17576092
REVERSE LENGTH=385
Length = 385
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 8 LPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELATPR 55
LP DL + ILLRLP KS+ R + V K W S+ +DP+F + +E +PR
Sbjct: 26 LPLDLTSEILLRLPEKSIARFRCVSKLWLSITTDPYFI-NLFETRSPR 72
>AT4G09190.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr4:5855176-5856327
FORWARD LENGTH=383
Length = 383
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 3 TQIHHLPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKS 47
+Q H+P DLI I+ LP KS++R ++V K W S+I+ P F S
Sbjct: 17 SQREHIPLDLIVEIVSSLPAKSIVRFRSVSKLWSSIITTPDFTSS 61
>AT3G17270.1 | Symbols: | F-box family protein |
chr3:5902479-5902883 REVERSE LENGTH=134
Length = 134
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 3 TQIHHLPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSH 48
T I +LP +L + IL R+P KSL + K +CK W +L DP F K +
Sbjct: 2 TTIPNLPDELESEILSRVPAKSLAKWKTICKRWYALFRDPRFVKKN 47
>AT3G08750.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:2656716-2657825
REVERSE LENGTH=369
Length = 369
Score = 45.8 bits (107), Expect = 6e-06, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 8 LPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELATPRLVFNT 60
LP +LI IL ++P +SL+R K+ CK W +LI++ F +H + +P T
Sbjct: 12 LPFELIEEILYKIPAESLIRFKSTCKKWYNLITEKRFMYNHLDHYSPERFIRT 64
>AT1G13200.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:4507221-4508528
REVERSE LENGTH=435
Length = 435
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 8 LPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELATPRLVFNTKL 62
LP D++ I LR PVK+L+R+K++ K WRS I F + H +A V + K+
Sbjct: 43 LPNDVLEEIFLRFPVKALIRLKSLSKQWRSTIESRSFEERHLTIAKKAFVDHPKV 97
>AT2G41473.1 | Symbols: | F-box family protein |
chr2:17294453-17294728 REVERSE LENGTH=91
Length = 91
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 25/38 (65%)
Query: 11 DLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSH 48
DL+ IL ++PVK LLR + VCK WRSL D F + H
Sbjct: 7 DLVIEILAKVPVKYLLRFRCVCKSWRSLFQDERFIRMH 44
>AT3G25460.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:9231581-9232666
REVERSE LENGTH=361
Length = 361
Score = 45.1 bits (105), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 7 HLPQDLITRILLRLPVKSLLRVKAVCKFWRSLISDPHFAKSHYELATPR 55
LP+DL+ IL R+P SL R+++ CK W L +D F H A PR
Sbjct: 5 ELPEDLLVEILCRVPATSLKRLRSTCKLWNHLYNDKRFKSKHCHKA-PR 52