Miyakogusa Predicted Gene
- Lj5g3v2166220.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2166220.1 tr|G7IAT6|G7IAT6_MEDTR E3 ubiquitin-protein
ligase MARCH2 OS=Medicago truncatula GN=MTR_1g108490
PE=,80.67,0,ZF_RING_CH,Zinc finger, RING-CH-type; RING/U-box,NULL;
seg,NULL; no description,Zinc finger, RING/FY,CUFF.56786.1
(269 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G01275.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 256 2e-68
AT2G01275.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 256 2e-68
AT5G38070.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 178 3e-45
AT2G02960.3 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 165 3e-41
AT2G02960.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 165 3e-41
AT2G02960.4 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 165 3e-41
AT2G02960.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 165 3e-41
AT1G14260.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 149 2e-36
AT1G14260.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 149 2e-36
AT3G47550.6 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 144 8e-35
AT3G47550.3 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 144 8e-35
AT1G02610.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 142 3e-34
AT2G02960.5 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 136 1e-32
AT3G47550.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 136 2e-32
AT5G62460.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 135 2e-32
AT4G02075.1 | Symbols: PIT1 | RING/FYVE/PHD zinc finger superfam... 133 1e-31
AT3G47550.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 123 2e-28
AT4G34100.1 | Symbols: | RING/U-box superfamily protein | chr4:... 59 4e-09
AT4G34100.2 | Symbols: | RING/U-box superfamily protein | chr4:... 59 5e-09
AT2G45530.1 | Symbols: | RING/U-box superfamily protein | chr2:... 55 4e-08
AT4G32670.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 55 6e-08
AT3G06330.2 | Symbols: | RING/U-box superfamily protein | chr3:... 51 9e-07
AT3G06330.1 | Symbols: | RING/U-box superfamily protein | chr3:... 51 9e-07
AT3G06330.3 | Symbols: | RING/U-box superfamily protein | chr3:... 50 2e-06
AT2G37950.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 49 3e-06
AT5G03180.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 4e-06
AT3G09760.1 | Symbols: | RING/U-box superfamily protein | chr3:... 49 4e-06
AT5G03180.2 | Symbols: | RING/U-box superfamily protein | chr5:... 49 4e-06
AT5G60580.4 | Symbols: | RING/U-box superfamily protein | chr5:... 49 4e-06
AT5G60580.2 | Symbols: | RING/U-box superfamily protein | chr5:... 49 4e-06
AT5G60580.3 | Symbols: | RING/U-box superfamily protein | chr5:... 49 4e-06
AT5G60580.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 4e-06
AT5G18760.1 | Symbols: | RING/U-box superfamily protein | chr5:... 48 6e-06
>AT2G01275.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr2:142610-143809 REVERSE LENGTH=259
Length = 259
Score = 256 bits (653), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/238 (52%), Positives = 158/238 (66%), Gaps = 11/238 (4%)
Query: 1 MGDHFDLLVDRXXXXXXXXXXXXXRKRSMQAACSVVNDTKVDISLIKM-GPGDIKYPGKM 59
MGDHF LLVDR R + +QA V T +D ++M GD+ M
Sbjct: 1 MGDHFVLLVDRLITESTIEAAIQSRNQMLQANIPVEECTILDDKTLEMLRNGDLS----M 56
Query: 60 VECRICHDDDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPFKPGYTAPP 119
ECRICHD+D DSNME PCSC GS+KYAHRRC+QRWCNEKGDTTCEICHQ FKP YTAPP
Sbjct: 57 AECRICHDEDLDSNMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDYTAPP 116
Query: 120 PLFQFGRIPMSFRGNWEISRRDLNSAHLVSMVPTDPNLLNSNYDQDSPSTSGSLLCCRSV 179
PL + G +P+ FRGNW IS+R+ +++VP D ++ Y S++ S +CCRS+
Sbjct: 117 PLLELGHVPLHFRGNWGISQRE---HRFITVVPADSTFIDQPYPL---SSTTSFICCRSL 170
Query: 180 AVIFMVLLILRHALPLVITGNKEYSFPLFMLVFFRTAGVVLPIYFMVRAVTLIQRHRR 237
+IFM LLILRH LPLV+TG+ + FPLF L+F R G++LPIY + +AV +RH R
Sbjct: 171 VLIFMALLILRHTLPLVLTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAVATCRRHSR 228
>AT2G01275.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr2:142610-143809 REVERSE LENGTH=259
Length = 259
Score = 256 bits (653), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/238 (52%), Positives = 158/238 (66%), Gaps = 11/238 (4%)
Query: 1 MGDHFDLLVDRXXXXXXXXXXXXXRKRSMQAACSVVNDTKVDISLIKM-GPGDIKYPGKM 59
MGDHF LLVDR R + +QA V T +D ++M GD+ M
Sbjct: 1 MGDHFVLLVDRLITESTIEAAIQSRNQMLQANIPVEECTILDDKTLEMLRNGDLS----M 56
Query: 60 VECRICHDDDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPFKPGYTAPP 119
ECRICHD+D DSNME PCSC GS+KYAHRRC+QRWCNEKGDTTCEICHQ FKP YTAPP
Sbjct: 57 AECRICHDEDLDSNMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDYTAPP 116
Query: 120 PLFQFGRIPMSFRGNWEISRRDLNSAHLVSMVPTDPNLLNSNYDQDSPSTSGSLLCCRSV 179
PL + G +P+ FRGNW IS+R+ +++VP D ++ Y S++ S +CCRS+
Sbjct: 117 PLLELGHVPLHFRGNWGISQRE---HRFITVVPADSTFIDQPYPL---SSTTSFICCRSL 170
Query: 180 AVIFMVLLILRHALPLVITGNKEYSFPLFMLVFFRTAGVVLPIYFMVRAVTLIQRHRR 237
+IFM LLILRH LPLV+TG+ + FPLF L+F R G++LPIY + +AV +RH R
Sbjct: 171 VLIFMALLILRHTLPLVLTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAVATCRRHSR 228
>AT5G38070.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr5:15190254-15191588 FORWARD LENGTH=259
Length = 259
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/238 (41%), Positives = 140/238 (58%), Gaps = 13/238 (5%)
Query: 1 MGDHFDLLVDRXXXXXXXXXXXXXRKRSMQAACSVVNDTKVDISLIKMGPGDIKYPGKMV 60
MGDH L+VDR ++ VN+ V S+ G K V
Sbjct: 1 MGDHLVLVVDRLSSDSGLGTVNRADPKA-----DSVNEDGVSESI---SAGADLCESKFV 52
Query: 61 ECRICHDDDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPFKPGYTAPPP 120
+CRICHD+DED+NM+ PCSC G+LK+AH C+QRWCNEKGDT CEIC Q +KPGYTAP
Sbjct: 53 QCRICHDEDEDTNMDTPCSCSGTLKFAHHNCVQRWCNEKGDTVCEICRQQYKPGYTAPRQ 112
Query: 121 LFQFGRIPMSFRGNWEISRRDLNSAHLVSMVPTDPNLLNSNYDQDSPSTSGSLLCCRSVA 180
LF + I M+F +W I DL + + ++ D ++D S + SL+CCR +A
Sbjct: 113 LFHYTGISMNFGSDWGIEGLDLRNPYFLTWGDAD-----DDHDLYSFHSPTSLICCRLIA 167
Query: 181 VIFMVLLILRHALPLVITGNKEYSFPLFMLVFFRTAGVVLPIYFMVRAVTLIQRHRRQ 238
++F++LL LRH+LP+++ G ++S L ML RT G++L Y ++ +IQR R++
Sbjct: 168 LLFVLLLFLRHSLPVLLGGVDDFSITLLMLPLVRTLGILLIAYVFFKSFIVIQRCRQE 225
>AT2G02960.3 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr2:862346-863980 REVERSE LENGTH=271
Length = 271
Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/210 (43%), Positives = 126/210 (60%), Gaps = 8/210 (3%)
Query: 61 ECRICHDDDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPFKPGYTAPPP 120
ECRIC D+ N+E+PC+C GSLKYAHR+C+QRWCNEKG+ CEICHQP++PGYTAPPP
Sbjct: 42 ECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNIICEICHQPYQPGYTAPPP 101
Query: 121 LFQFGRIPMSFRGNWEISRRDLNSAHLVSMVPTDPNLLNSNYDQDSPSTSGSLLCCRSVA 180
Q + G W IS D++ L+++ + L S Y + + S++ CRS A
Sbjct: 102 PLQPEETTIDIGGGWTISGLDVHDPRLLAIAEAERRYLESEYVEYTASSASGAAFCRSAA 161
Query: 181 VIFMVLLILRHALPLVITGNKEYSFP--LFMLVFFRTAGVVLPIYFMVRAVTLIQRHRRQ 238
+I M LL+LRHAL + + E P + LV R AG +LP Y M A++++QR RRQ
Sbjct: 162 LILMALLLLRHALTITDDTDGEEDDPSSILSLVLLRAAGFLLPCYIMAWAISILQR-RRQ 220
Query: 239 HRELPNALVSLSDNEIEQGALQHQPHVIHL 268
+E AL + ++ G QP +H
Sbjct: 221 RQEA-AALATQFALVLQSG----QPRTVHF 245
>AT2G02960.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr2:862346-863980 REVERSE LENGTH=271
Length = 271
Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/210 (43%), Positives = 126/210 (60%), Gaps = 8/210 (3%)
Query: 61 ECRICHDDDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPFKPGYTAPPP 120
ECRIC D+ N+E+PC+C GSLKYAHR+C+QRWCNEKG+ CEICHQP++PGYTAPPP
Sbjct: 42 ECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNIICEICHQPYQPGYTAPPP 101
Query: 121 LFQFGRIPMSFRGNWEISRRDLNSAHLVSMVPTDPNLLNSNYDQDSPSTSGSLLCCRSVA 180
Q + G W IS D++ L+++ + L S Y + + S++ CRS A
Sbjct: 102 PLQPEETTIDIGGGWTISGLDVHDPRLLAIAEAERRYLESEYVEYTASSASGAAFCRSAA 161
Query: 181 VIFMVLLILRHALPLVITGNKEYSFP--LFMLVFFRTAGVVLPIYFMVRAVTLIQRHRRQ 238
+I M LL+LRHAL + + E P + LV R AG +LP Y M A++++QR RRQ
Sbjct: 162 LILMALLLLRHALTITDDTDGEEDDPSSILSLVLLRAAGFLLPCYIMAWAISILQR-RRQ 220
Query: 239 HRELPNALVSLSDNEIEQGALQHQPHVIHL 268
+E AL + ++ G QP +H
Sbjct: 221 RQEA-AALATQFALVLQSG----QPRTVHF 245
>AT2G02960.4 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr2:862346-863980 REVERSE LENGTH=271
Length = 271
Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/210 (43%), Positives = 126/210 (60%), Gaps = 8/210 (3%)
Query: 61 ECRICHDDDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPFKPGYTAPPP 120
ECRIC D+ N+E+PC+C GSLKYAHR+C+QRWCNEKG+ CEICHQP++PGYTAPPP
Sbjct: 42 ECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNIICEICHQPYQPGYTAPPP 101
Query: 121 LFQFGRIPMSFRGNWEISRRDLNSAHLVSMVPTDPNLLNSNYDQDSPSTSGSLLCCRSVA 180
Q + G W IS D++ L+++ + L S Y + + S++ CRS A
Sbjct: 102 PLQPEETTIDIGGGWTISGLDVHDPRLLAIAEAERRYLESEYVEYTASSASGAAFCRSAA 161
Query: 181 VIFMVLLILRHALPLVITGNKEYSFP--LFMLVFFRTAGVVLPIYFMVRAVTLIQRHRRQ 238
+I M LL+LRHAL + + E P + LV R AG +LP Y M A++++QR RRQ
Sbjct: 162 LILMALLLLRHALTITDDTDGEEDDPSSILSLVLLRAAGFLLPCYIMAWAISILQR-RRQ 220
Query: 239 HRELPNALVSLSDNEIEQGALQHQPHVIHL 268
+E AL + ++ G QP +H
Sbjct: 221 RQEA-AALATQFALVLQSG----QPRTVHF 245
>AT2G02960.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr2:862346-863980 REVERSE LENGTH=271
Length = 271
Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/210 (43%), Positives = 126/210 (60%), Gaps = 8/210 (3%)
Query: 61 ECRICHDDDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPFKPGYTAPPP 120
ECRIC D+ N+E+PC+C GSLKYAHR+C+QRWCNEKG+ CEICHQP++PGYTAPPP
Sbjct: 42 ECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNIICEICHQPYQPGYTAPPP 101
Query: 121 LFQFGRIPMSFRGNWEISRRDLNSAHLVSMVPTDPNLLNSNYDQDSPSTSGSLLCCRSVA 180
Q + G W IS D++ L+++ + L S Y + + S++ CRS A
Sbjct: 102 PLQPEETTIDIGGGWTISGLDVHDPRLLAIAEAERRYLESEYVEYTASSASGAAFCRSAA 161
Query: 181 VIFMVLLILRHALPLVITGNKEYSFP--LFMLVFFRTAGVVLPIYFMVRAVTLIQRHRRQ 238
+I M LL+LRHAL + + E P + LV R AG +LP Y M A++++QR RRQ
Sbjct: 162 LILMALLLLRHALTITDDTDGEEDDPSSILSLVLLRAAGFLLPCYIMAWAISILQR-RRQ 220
Query: 239 HRELPNALVSLSDNEIEQGALQHQPHVIHL 268
+E AL + ++ G QP +H
Sbjct: 221 RQEA-AALATQFALVLQSG----QPRTVHF 245
>AT1G14260.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr1:4873200-4874430 FORWARD LENGTH=265
Length = 265
Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/187 (44%), Positives = 115/187 (61%), Gaps = 3/187 (1%)
Query: 60 VECRICHDDDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPFKPGYTAPP 119
ECRIC D+ + N+E+PC+C GSLKYAHR+C+QRWCNEKG+T CEICHQP++ GYT+PP
Sbjct: 55 AECRICQDECDIKNLESPCACNGSLKYAHRKCVQRWCNEKGNTICEICHQPYQAGYTSPP 114
Query: 120 PLFQFGRIPMSFRGNWEISRRDLNSAHLVSMVPTDPNLLNSNYDQDSPSTSGSLLCCRSV 179
P Q + G W IS DL+ L+++ + +L S YD + S + RS
Sbjct: 115 PPPQSEETTIDIGGGWRISGLDLDDPRLLAIAEAERQILESEYDDYTASDTSGAAFFRSA 174
Query: 180 AVIFMVLLILRHALPLVITGNKEYSFPLFMLVFF--RTAGVVLPIYFMVRAVTLIQRHRR 237
A+I M LL+LRHAL + + E P +L F R A +LP Y M A++++ R RR
Sbjct: 175 ALILMTLLLLRHALTIPDYSDSEDDDPSSILSLFLLRAASFLLPCYIMASAISILHR-RR 233
Query: 238 QHRELPN 244
Q +E +
Sbjct: 234 QRQEAAD 240
>AT1G14260.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr1:4873200-4874430 FORWARD LENGTH=265
Length = 265
Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/187 (44%), Positives = 115/187 (61%), Gaps = 3/187 (1%)
Query: 60 VECRICHDDDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPFKPGYTAPP 119
ECRIC D+ + N+E+PC+C GSLKYAHR+C+QRWCNEKG+T CEICHQP++ GYT+PP
Sbjct: 55 AECRICQDECDIKNLESPCACNGSLKYAHRKCVQRWCNEKGNTICEICHQPYQAGYTSPP 114
Query: 120 PLFQFGRIPMSFRGNWEISRRDLNSAHLVSMVPTDPNLLNSNYDQDSPSTSGSLLCCRSV 179
P Q + G W IS DL+ L+++ + +L S YD + S + RS
Sbjct: 115 PPPQSEETTIDIGGGWRISGLDLDDPRLLAIAEAERQILESEYDDYTASDTSGAAFFRSA 174
Query: 180 AVIFMVLLILRHALPLVITGNKEYSFPLFMLVFF--RTAGVVLPIYFMVRAVTLIQRHRR 237
A+I M LL+LRHAL + + E P +L F R A +LP Y M A++++ R RR
Sbjct: 175 ALILMTLLLLRHALTIPDYSDSEDDDPSSILSLFLLRAASFLLPCYIMASAISILHR-RR 233
Query: 238 QHRELPN 244
Q +E +
Sbjct: 234 QRQEAAD 240
>AT3G47550.6 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr3:17523841-17525278 FORWARD LENGTH=288
Length = 288
Score = 144 bits (362), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 135/252 (53%), Gaps = 15/252 (5%)
Query: 1 MGDHFDLLVDR--------XXXXXXXXXXXXXRKRSMQAACSVVNDTKVDISLIKMGPGD 52
M DH L DR R + A S VN+T+V + D
Sbjct: 1 MADHLSLCTDRLITSESLDSEKDSDSSGESSYRPQGTDLASSSVNETEVPREYYAVA--D 58
Query: 53 IKYPG-KMVECRICHDDDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPF 111
+ P + VECRIC ++D N+EAPC+C GSLKYAHR+C+QRWCNEKGD TCEICHQP+
Sbjct: 59 EEEPLLQSVECRICQEEDSTKNLEAPCACNGSLKYAHRKCVQRWCNEKGDITCEICHQPY 118
Query: 112 KPGYTAPPPLFQFGRIPMSFRGNWEIS-RRDLNSAHLVSMVPTDPNLLNSNYDQDSPSTS 170
+ GYTAPPP I + +WE DL +++M + + L ++YD+ S + S
Sbjct: 119 QHGYTAPPPPPPDETI-IHIGDDWENGVPLDLTDPRILAMAAAERHFLEADYDEYSENNS 177
Query: 171 GSLLCCRSVAVIFMVLLILRHALPLVITGNKEYS-FPLFMLVFFRTAGVVLPIYFMVRAV 229
CRS A+I M LL+LR AL L + E F L R AG +LP Y M A+
Sbjct: 178 SGAAFCRSAALILMALLLLRDALNLTTNPDDEDDPTAFFSLFLLRAAGFLLPCYIMAWAI 237
Query: 230 TLIQRHRRQHRE 241
++QR RRQ +E
Sbjct: 238 GILQR-RRQRQE 248
>AT3G47550.3 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr3:17523841-17525278 FORWARD LENGTH=288
Length = 288
Score = 144 bits (362), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 135/252 (53%), Gaps = 15/252 (5%)
Query: 1 MGDHFDLLVDR--------XXXXXXXXXXXXXRKRSMQAACSVVNDTKVDISLIKMGPGD 52
M DH L DR R + A S VN+T+V + D
Sbjct: 1 MADHLSLCTDRLITSESLDSEKDSDSSGESSYRPQGTDLASSSVNETEVPREYYAVA--D 58
Query: 53 IKYPG-KMVECRICHDDDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPF 111
+ P + VECRIC ++D N+EAPC+C GSLKYAHR+C+QRWCNEKGD TCEICHQP+
Sbjct: 59 EEEPLLQSVECRICQEEDSTKNLEAPCACNGSLKYAHRKCVQRWCNEKGDITCEICHQPY 118
Query: 112 KPGYTAPPPLFQFGRIPMSFRGNWEIS-RRDLNSAHLVSMVPTDPNLLNSNYDQDSPSTS 170
+ GYTAPPP I + +WE DL +++M + + L ++YD+ S + S
Sbjct: 119 QHGYTAPPPPPPDETI-IHIGDDWENGVPLDLTDPRILAMAAAERHFLEADYDEYSENNS 177
Query: 171 GSLLCCRSVAVIFMVLLILRHALPLVITGNKEYS-FPLFMLVFFRTAGVVLPIYFMVRAV 229
CRS A+I M LL+LR AL L + E F L R AG +LP Y M A+
Sbjct: 178 SGAAFCRSAALILMALLLLRDALNLTTNPDDEDDPTAFFSLFLLRAAGFLLPCYIMAWAI 237
Query: 230 TLIQRHRRQHRE 241
++QR RRQ +E
Sbjct: 238 GILQR-RRQRQE 248
>AT1G02610.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr1:553181-555854 REVERSE LENGTH=221
Length = 221
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 107/180 (59%), Gaps = 12/180 (6%)
Query: 62 CRICHDDDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPFKPGYTAPPPL 121
CRICH+++ +S EAPCSC G++K+AHR CIQRWC+EKG+T CEIC Q +KPGYT
Sbjct: 20 CRICHEEEAESYFEAPCSCSGTIKFAHRDCIQRWCDEKGNTICEICLQEYKPGYTTTSKP 79
Query: 122 FQFGRIPMSFRGNWEISRRDLNSAHLVSMV----PTDPNLLNSNYDQDSPSTSGSLLCCR 177
+F ++ R N I RR+ + +D NS D+ + CCR
Sbjct: 80 SRFIETAVTIRDNLHIMRRENGRRRRNRRLVNREESDFQECNSGVDRGAS-------CCR 132
Query: 178 SVAVIFMVLLILRHALPLVITGNKEYSFPLFMLVFFRTAGVVLPIYFMVRAVTLIQRHRR 237
+A+IF V+L+++HA V G +EY + +F ++ + G++LP+ ++R +T IQR R
Sbjct: 133 YLALIFSVILLIKHAFDAVY-GTEEYPYTIFTVLTLKAIGILLPMLVIIRTITAIQRSLR 191
>AT2G02960.5 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr2:862440-863980 REVERSE LENGTH=275
Length = 275
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 90/135 (66%)
Query: 61 ECRICHDDDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPFKPGYTAPPP 120
ECRIC D+ N+E+PC+C GSLKYAHR+C+QRWCNEKG+ CEICHQP++PGYTAPPP
Sbjct: 42 ECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNIICEICHQPYQPGYTAPPP 101
Query: 121 LFQFGRIPMSFRGNWEISRRDLNSAHLVSMVPTDPNLLNSNYDQDSPSTSGSLLCCRSVA 180
Q + G W IS D++ L+++ + L S Y + + S++ CRS A
Sbjct: 102 PLQPEETTIDIGGGWTISGLDVHDPRLLAIAEAERRYLESEYVEYTASSASGAAFCRSAA 161
Query: 181 VIFMVLLILRHALPL 195
+I M LL+LRHAL +
Sbjct: 162 LILMALLLLRHALTI 176
>AT3G47550.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr3:17523841-17525168 FORWARD LENGTH=249
Length = 249
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/243 (39%), Positives = 128/243 (52%), Gaps = 14/243 (5%)
Query: 1 MGDHFDLLVDR--------XXXXXXXXXXXXXRKRSMQAACSVVNDTKVDISLIKMGPGD 52
M DH L DR R + A S VN+T+V + D
Sbjct: 1 MADHLSLCTDRLITSESLDSEKDSDSSGESSYRPQGTDLASSSVNETEVPREYYAVA--D 58
Query: 53 IKYPG-KMVECRICHDDDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPF 111
+ P + VECRIC ++D N+EAPC+C GSLKYAHR+C+QRWCNEKGD TCEICHQP+
Sbjct: 59 EEEPLLQSVECRICQEEDSTKNLEAPCACNGSLKYAHRKCVQRWCNEKGDITCEICHQPY 118
Query: 112 KPGYTAPPPLFQFGRIPMSFRGNWEISR-RDLNSAHLVSMVPTDPNLLNSNYDQDSPSTS 170
+ GYTAPPP I + +WE DL +++M + + L ++YD+ S + S
Sbjct: 119 QHGYTAPPPPPPDETI-IHIGDDWENGVPLDLTDPRILAMAAAERHFLEADYDEYSENNS 177
Query: 171 GSLLCCRSVAVIFMVLLILRHALPLVITGNKEYS-FPLFMLVFFRTAGVVLPIYFMVRAV 229
CRS A+I M LL+LR AL L + E F L R AG +LP Y M A+
Sbjct: 178 SGAAFCRSAALILMALLLLRDALNLTTNPDDEDDPTAFFSLFLLRAAGFLLPCYIMAWAI 237
Query: 230 TLI 232
++
Sbjct: 238 GIL 240
>AT5G62460.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr5:25075545-25077072 FORWARD LENGTH=307
Length = 307
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 117/186 (62%), Gaps = 5/186 (2%)
Query: 58 KMVECRICHDDDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPFKPGYTA 117
+ VECRIC ++D N+E+PCSC GSLKYAHR+C+QRWCNEKGDTTCEICH+ ++PGYTA
Sbjct: 74 QSVECRICQEEDSVKNLESPCSCSGSLKYAHRKCVQRWCNEKGDTTCEICHKSYQPGYTA 133
Query: 118 PPPLFQFGRIPMSFRGNWEIS-RRDLNSAHLVSMVPTDPNLLNSNYDQDSPSTSGSLLCC 176
PPP I + +W DLN +++M + + +++YD+ + S S C
Sbjct: 134 PPPPPADDTI-IDIGEDWGNGVHLDLNDPRILAMAAAERHFFDADYDEYADSNSSGAAFC 192
Query: 177 RSVAVIFMVLLILRHALPLV-ITGNKEYSFP--LFMLVFFRTAGVVLPIYFMVRAVTLIQ 233
RS A+I M LL+LRHAL L + E P F L R AG +LP Y M A++++Q
Sbjct: 193 RSAALILMALLLLRHALNLTNNNSDDEEDDPSAFFFLFMLRAAGFLLPCYIMAWAISILQ 252
Query: 234 RHRRQH 239
R R++
Sbjct: 253 RRRQRQ 258
>AT4G02075.1 | Symbols: PIT1 | RING/FYVE/PHD zinc finger superfamily
protein | chr4:913555-916414 REVERSE LENGTH=218
Length = 218
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 114/194 (58%), Gaps = 11/194 (5%)
Query: 52 DIKYPGKMVECRICHDDDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPF 111
D K ++ CRICH+++E+S E PC+C G++K+AHR CIQRWCNEKG+TTCEIC Q +
Sbjct: 10 DTKSKVRITRCRICHEEEEESFFEVPCACSGTVKFAHRNCIQRWCNEKGNTTCEICLQVY 69
Query: 112 KPGYTAPPPLFQFGRIPMSFRGNWEISRRDLNSAHLVSMVPTDPNLLNSNYDQDSPSTSG 171
K GYTA + ++ R N RR S LVS+ +D + NS D+ +
Sbjct: 70 KDGYTAVLKQSKLIEQEVTIRVN---GRRRRRSRRLVSIAESDISQCNSVADRGASF--- 123
Query: 172 SLLCCRSVAVIFMVLLILRHALPLVITGNKEYSFPLFMLVFFRTAGVVLPIYFMVRAVTL 231
CRS+ V L+++H VI G +EY F +F ++ + G++LP++ ++R ++
Sbjct: 124 ----CRSLTFTLSVFLLMKHTFD-VIYGTEEYPFSVFTVLTLKAIGILLPMFIIIRTIST 178
Query: 232 IQRHRRQHRELPNA 245
IQ+ R+ + P +
Sbjct: 179 IQKTLRRRHQYPES 192
>AT3G47550.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr3:17523841-17524942 FORWARD LENGTH=232
Length = 232
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 100/188 (53%), Gaps = 13/188 (6%)
Query: 1 MGDHFDLLVDR--------XXXXXXXXXXXXXRKRSMQAACSVVNDTKVDISLIKMGPGD 52
M DH L DR R + A S VN+T+V + D
Sbjct: 1 MADHLSLCTDRLITSESLDSEKDSDSSGESSYRPQGTDLASSSVNETEVPREYYAVA--D 58
Query: 53 IKYPG-KMVECRICHDDDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPF 111
+ P + VECRIC ++D N+EAPC+C GSLKYAHR+C+QRWCNEKGD TCEICHQP+
Sbjct: 59 EEEPLLQSVECRICQEEDSTKNLEAPCACNGSLKYAHRKCVQRWCNEKGDITCEICHQPY 118
Query: 112 KPGYTAPPPLFQFGRIPMSFRGNWEISR-RDLNSAHLVSMVPTDPNLLNSNYDQDSPSTS 170
+ GYTAPPP I + +WE DL +++M + + L ++YD+ S + S
Sbjct: 119 QHGYTAPPPPPPDETI-IHIGDDWENGVPLDLTDPRILAMAAAERHFLEADYDEYSENNS 177
Query: 171 GSLLCCRS 178
CRS
Sbjct: 178 SGAAFCRS 185
>AT4G34100.1 | Symbols: | RING/U-box superfamily protein |
chr4:16330590-16334864 FORWARD LENGTH=1108
Length = 1108
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 62 CRICHD-DDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQP--FKPGYTAP 118
CRIC + D D+ + PC+C GS+K+ H+ C+ +W N CE+C P F P Y
Sbjct: 68 CRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHPFSFSPVYADN 127
Query: 119 PP 120
P
Sbjct: 128 AP 129
>AT4G34100.2 | Symbols: | RING/U-box superfamily protein |
chr4:16330590-16334864 FORWARD LENGTH=1107
Length = 1107
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 62 CRICHD-DDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQP--FKPGYTAP 118
CRIC + D D+ + PC+C GS+K+ H+ C+ +W N CE+C P F P Y
Sbjct: 68 CRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHPFSFSPVYADN 127
Query: 119 PP 120
P
Sbjct: 128 AP 129
>AT2G45530.1 | Symbols: | RING/U-box superfamily protein |
chr2:18756604-18757326 FORWARD LENGTH=240
Length = 240
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 61 ECRICHDDDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICH---QPFKPGYTA 117
+CR+C D E+ +E C C G L AHR CI W KG CEIC P T
Sbjct: 73 QCRVCLQDKEEVLIELGCQCRGGLAKAHRSCIDAWFRTKGSNQCEICQVVAVNVTPPETQ 132
Query: 118 PPPLFQFGRIPMSFR 132
P + RI S+R
Sbjct: 133 PTTNYWVWRIDPSYR 147
>AT4G32670.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr4:15759527-15762847 REVERSE LENGTH=860
Length = 860
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 62 CRICHDDDE-DSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPFK--PGYTAP 118
CRIC +E D+ + PC+C GSLKY H C+ W N + CEIC + + P Y+
Sbjct: 33 CRICQSPEEPDNPLRHPCACRGSLKYIHSDCLFLWLNRRKRNHCEICKRSYSIVPVYSEN 92
Query: 119 PP 120
P
Sbjct: 93 AP 94
>AT3G06330.2 | Symbols: | RING/U-box superfamily protein |
chr3:1918512-1919709 FORWARD LENGTH=257
Length = 257
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 62 CRICHDDDEDSN-MEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQ 109
CRIC D E+ N ++ CSC G L+ H C +W + KG TC++C Q
Sbjct: 49 CRICLDVCEEGNTLKMECSCKGDLRLVHEACAMKWFSTKGTRTCDVCRQ 97
>AT3G06330.1 | Symbols: | RING/U-box superfamily protein |
chr3:1917334-1919709 FORWARD LENGTH=426
Length = 426
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 62 CRICHDDDEDSN-MEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQ 109
CRIC D E+ N ++ CSC G L+ H C +W + KG TC++C Q
Sbjct: 218 CRICLDVCEEGNTLKMECSCKGDLRLVHEACAMKWFSTKGTRTCDVCRQ 266
>AT3G06330.3 | Symbols: | RING/U-box superfamily protein |
chr3:1917334-1919330 FORWARD LENGTH=363
Length = 363
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 62 CRICHDDDEDSN-MEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQ 109
CRIC D E+ N ++ CSC G L+ H C +W + KG TC++C Q
Sbjct: 218 CRICLDVCEEGNTLKMECSCKGDLRLVHEACAMKWFSTKGTRTCDVCRQ 266
>AT2G37950.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr2:15882536-15883665 REVERSE LENGTH=207
Length = 207
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 61 ECRICHDDDEDSN---MEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICH 108
+CRICH E S +E CSC L AHR+C + W KGD TCEIC
Sbjct: 83 DCRICHLGVETSGGGAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEICQ 133
>AT5G03180.1 | Symbols: | RING/U-box superfamily protein |
chr5:754201-756411 REVERSE LENGTH=462
Length = 462
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 51 GDIKYPGKMVECRIC----HDDDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEI 106
G P + CRIC +D+E ME C C G L AH+ C +W KG+ TC++
Sbjct: 236 GGEDVPEEEAVCRICMVEMEEDEEAFKME--CMCKGELALAHKTCTIKWFTIKGNITCDV 293
Query: 107 CHQPFK 112
C Q +
Sbjct: 294 CKQEVR 299
>AT3G09760.1 | Symbols: | RING/U-box superfamily protein |
chr3:2992975-2995451 REVERSE LENGTH=491
Length = 491
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 14/78 (17%)
Query: 36 VNDTKVDISLIKMGPGDIKYPGKMVECRIC----HDDDEDSNMEAPCSCCGSLKYAHRRC 91
+ND VD G D+ P + CRIC +D E ME C C G L AH+ C
Sbjct: 248 LNDANVD------GAEDV--PEEEAVCRICLVELGEDSEAFKME--CLCRGELALAHKEC 297
Query: 92 IQRWCNEKGDTTCEICHQ 109
+W KG+ TC++C Q
Sbjct: 298 TIKWFTIKGNRTCDVCKQ 315
>AT5G03180.2 | Symbols: | RING/U-box superfamily protein |
chr5:754201-756411 REVERSE LENGTH=466
Length = 466
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 51 GDIKYPGKMVECRIC----HDDDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEI 106
G P + CRIC +D+E ME C C G L AH+ C +W KG+ TC++
Sbjct: 240 GGEDVPEEEAVCRICMVEMEEDEEAFKME--CMCKGELALAHKTCTIKWFTIKGNITCDV 297
Query: 107 CHQPFK 112
C Q +
Sbjct: 298 CKQEVR 303
>AT5G60580.4 | Symbols: | RING/U-box superfamily protein |
chr5:24354298-24356706 FORWARD LENGTH=494
Length = 494
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 62 CRICHDD--DEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPFK 112
CRIC + + ++ CSC G L AH+ C +W KG+ TCE+C Q K
Sbjct: 257 CRICLVELCEGGETLKMECSCKGELALAHKDCALKWFTIKGNKTCEVCKQEVK 309
>AT5G60580.2 | Symbols: | RING/U-box superfamily protein |
chr5:24354298-24356706 FORWARD LENGTH=494
Length = 494
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 62 CRICHDD--DEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPFK 112
CRIC + + ++ CSC G L AH+ C +W KG+ TCE+C Q K
Sbjct: 257 CRICLVELCEGGETLKMECSCKGELALAHKDCALKWFTIKGNKTCEVCKQEVK 309
>AT5G60580.3 | Symbols: | RING/U-box superfamily protein |
chr5:24354298-24356706 FORWARD LENGTH=487
Length = 487
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 62 CRICHDD--DEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPFK 112
CRIC + + ++ CSC G L AH+ C +W KG+ TCE+C Q K
Sbjct: 257 CRICLVELCEGGETLKMECSCKGELALAHKDCALKWFTIKGNKTCEVCKQEVK 309
>AT5G60580.1 | Symbols: | RING/U-box superfamily protein |
chr5:24354298-24356706 FORWARD LENGTH=487
Length = 487
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 62 CRICHDD--DEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPFK 112
CRIC + + ++ CSC G L AH+ C +W KG+ TCE+C Q K
Sbjct: 257 CRICLVELCEGGETLKMECSCKGELALAHKDCALKWFTIKGNKTCEVCKQEVK 309
>AT5G18760.1 | Symbols: | RING/U-box superfamily protein |
chr5:6258508-6260828 REVERSE LENGTH=411
Length = 411
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 62 CRICHDDDEDSN-MEAPCSCCGSLKYAHRRCIQRWCNEKGDTTCEICHQPFK 112
CRIC D E+ N ++ CSC G L+ H C +W + KG C++C Q +
Sbjct: 203 CRICLDVCEEGNTLKMECSCKGDLRLVHEHCAIKWFSTKGTRICDVCRQEVR 254