Miyakogusa Predicted Gene

Lj5g3v2166210.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2166210.1 Non Chatacterized Hit- tr|A5BK40|A5BK40_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,34.36,0.00000000000002,seg,NULL; FAS1 domain,FAS1 domain; Four
repeated domains in the Fasciclin I fam,FAS1 domain; no
desc,CUFF.56785.1
         (343 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G40940.1 | Symbols: FLA20 | putative fasciclin-like arabinoga...   166   1e-41
AT5G06920.1 | Symbols: FLA21 | FASCICLIN-like arabinogalactan pr...    69   3e-12

>AT5G40940.1 | Symbols: FLA20 | putative fasciclin-like
           arabinogalactan protein 20 | chr5:16406656-16407930
           REVERSE LENGTH=424
          Length = 424

 Score =  166 bits (421), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/319 (34%), Positives = 163/319 (51%), Gaps = 35/319 (10%)

Query: 30  AILDAADVLTDTGFVSMGLTLEIVAETL-LEHSPSATVFAPSDSAFKKSGQPSLDLLRYH 88
           ++  A +VL+D+G++SMGLTL++  + L LE     T+FAPSD +F K GQPSL  ++Y 
Sbjct: 68  SVSSAVEVLSDSGYLSMGLTLKLANQDLNLEDWQELTLFAPSDQSFSKFGQPSLLDMKYQ 127

Query: 89  FAXXXXXXXXXXXXXAGSNIPTMLAGQSLTATTSPS-DLIASFNNVKITSMPIYDDGFLL 147
            +              G+ IPT+ +  SLT T S       S NNV +   P++DDG+++
Sbjct: 128 LSPTRLPGETLRNLPNGAKIPTLRSNYSLTVTNSSRFGGKTSINNVVVQDSPVFDDGYVV 187

Query: 148 VYGIERFF-DPT---------------------------FQYTGPNPKPNPNSTCALKNS 179
           +YG + FF  PT                              T P+P    +ST  L N 
Sbjct: 188 IYGSDEFFTSPTKISDDSSSSSSIPSTTSSTGSIPIPSSATQTPPSPNIASDSTRNLPNR 247

Query: 180 T--AGSSDSFDQAVKTLSSGGYSAMASFLGMQL--SGVAEQSGITVFAPADETVLSRIGD 235
           +      + F+ A + L S G+  +A+FL +QL  +     + ITVFAP DE + +    
Sbjct: 248 SKPVNRFNIFESASRLLMSRGFVIIATFLALQLEDNTSGNDTKITVFAPIDEAIPNPTTK 307

Query: 236 FGDYPAFYRRHVVPCKLLWNDLVNIG-DGTELPTFLEGFSINITRSSGILILNGVPVFFP 294
           F DY   +R HVV   LLW DL     +G+ L T L+G+ I I+ S  IL+LNGVP+ +P
Sbjct: 308 FSDYVTIFRGHVVSQLLLWKDLQKFAKEGSILQTVLKGYEIEISLSGDILLLNGVPLIYP 367

Query: 295 DMVFNDKMVVHGLGDVLAA 313
           D+  ND + VHG   ++  
Sbjct: 368 DLYVNDWIAVHGFNQMIVT 386


>AT5G06920.1 | Symbols: FLA21 | FASCICLIN-like arabinogalactan
           protein 21 precursor | chr5:2142858-2143919 FORWARD
           LENGTH=353
          Length = 353

 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 127/301 (42%), Gaps = 25/301 (8%)

Query: 33  DAADVLTDTGFVSMGLTLEIVAETLLEHSPSATVFAPSDSAF--KKSGQPSL--DLLRYH 88
           +A++ L  + F ++   L I  E  L  SP+ T+FA  D++F    S  P     LL YH
Sbjct: 51  NASNTLRQSNFKAIATLLHISPEIFLSSSPNTTLFAIEDASFFNTSSLHPLFLKQLLHYH 110

Query: 89  FAXXXXXXXXXXXXXAGSNIPTMLAGQSLT-ATTSPSDLIASFNNVKITSMPIYDDGFLL 147
                           G+ +PT+L  +S+  +T +     A  N+V+IT   ++    L+
Sbjct: 111 TLPLMLSMDDLLKKPQGTCLPTLLHHKSVQISTVNQESRTAEVNHVRITHPDMFLGDSLV 170

Query: 148 VYGIERFFDPTFQYTGPNPKPNPNSTCALKNSTAGSSD-----SFDQAVKTLSSGGYSAM 202
           ++G+   F P  Q    +    P       N T+ + +      + + V+ LSS G+   
Sbjct: 171 IHGVIGPFSP-LQPHSDHLIHTPLCQSDTTNKTSNNEEVPVSIDWTRIVQLLSSNGFVPF 229

Query: 203 ASFLGMQLSGVAEQ-------SGITVFAPADETVLSRIGDFGDYPAFYRRHVVPCKLLWN 255
           A  L   L+ +          +G+T+ A  +   LS    F       R H++  +L + 
Sbjct: 230 AIGLHSVLNRIVNDHNHHKNLTGVTILATPNLVSLSSASPF--LYEVVRHHILVQRLTYK 287

Query: 256 DLVNIGDGTELPTFLEGFSINITR-----SSGILILNGVPVFFPDMVFNDKMVVHGLGDV 310
           D  ++ D   + T      + ITR     S G  +++GV +  PDM  +   V+HG+   
Sbjct: 288 DFASMSDKATVKTLDPYQDLTITRRNVNSSGGDFMISGVEIVDPDMFSSSNFVIHGISHT 347

Query: 311 L 311
           L
Sbjct: 348 L 348