Miyakogusa Predicted Gene
- Lj5g3v2150470.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2150470.1 tr|Q94H96|Q94H96_ORYSJ Os03g0761300 protein
OS=Oryza sativa subsp. japonica GN=OSJNBb0048A17.10
PE=4,27.23,1e-18,TPR-like,NULL; no description,Tetratricopeptide-like
helical; seg,NULL; PPR_2,Pentatricopeptide repe,CUFF.57159.1
(391 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 418 e-117
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 4e-48
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 7e-46
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 2e-45
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 4e-45
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 2e-44
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 7e-44
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 9e-44
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 1e-38
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 2e-38
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 148 6e-36
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 8e-36
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 3e-34
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 3e-34
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 3e-34
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 9e-33
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 137 2e-32
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 7e-32
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 7e-32
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 2e-31
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 133 2e-31
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 3e-31
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 4e-31
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 4e-31
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 5e-31
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 5e-31
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 9e-31
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 1e-30
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 3e-30
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 4e-30
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 128 7e-30
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 1e-29
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 4e-29
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 5e-29
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 8e-29
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 9e-29
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 9e-29
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 124 1e-28
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 1e-28
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 2e-28
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 121 7e-28
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 9e-28
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 9e-28
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 3e-27
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 119 5e-27
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 118 6e-27
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 4e-26
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 4e-26
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 4e-26
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 115 5e-26
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 5e-26
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 115 7e-26
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 114 1e-25
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 2e-25
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 114 2e-25
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 2e-25
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 2e-25
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 2e-25
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 2e-25
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 3e-25
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 3e-25
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 4e-25
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 4e-25
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 6e-25
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 6e-25
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 7e-25
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 7e-25
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 7e-25
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 8e-25
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 9e-25
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 1e-24
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 2e-24
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 110 2e-24
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 110 2e-24
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 3e-24
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 3e-24
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 3e-24
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 4e-24
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 5e-24
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 6e-24
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 6e-24
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 7e-24
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 1e-23
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 2e-23
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 3e-23
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 3e-23
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 106 4e-23
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 105 5e-23
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 6e-23
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 9e-23
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 1e-22
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 1e-22
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 102 4e-22
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 4e-22
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 5e-22
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 7e-22
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 2e-21
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 4e-21
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 9e-21
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 97 2e-20
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 3e-20
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 7e-20
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 8e-20
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 95 8e-20
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 94 1e-19
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 1e-19
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 1e-19
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 94 1e-19
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 94 2e-19
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 94 2e-19
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 3e-19
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 3e-19
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 7e-19
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 7e-19
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 7e-19
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 7e-19
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 9e-19
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 2e-18
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 4e-18
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 89 4e-18
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 9e-18
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 7e-17
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 7e-17
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 83 4e-16
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 81 2e-15
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 4e-15
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 4e-15
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 78 1e-14
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 4e-14
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 76 5e-14
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 75 6e-14
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 75 7e-14
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 69 4e-12
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 66 3e-11
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 64 1e-10
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 1e-10
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 64 2e-10
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT3G42630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 61 2e-09
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 59 5e-09
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 59 6e-09
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 59 8e-09
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT2G01860.1 | Symbols: EMB975 | Tetratricopeptide repeat (TPR)-l... 58 1e-08
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 58 1e-08
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-08
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-08
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 57 2e-08
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 3e-08
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 56 5e-08
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 5e-08
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 6e-08
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 55 9e-08
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 54 2e-07
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 54 2e-07
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 53 4e-07
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 52 5e-07
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 52 6e-07
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 52 7e-07
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 7e-07
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 52 9e-07
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 51 1e-06
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 51 1e-06
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 3e-06
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT3G46870.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 49 6e-06
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 49 9e-06
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 49 9e-06
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 49 9e-06
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 1e-05
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 418 bits (1074), Expect = e-117, Method: Compositional matrix adjust.
Identities = 194/315 (61%), Positives = 255/315 (80%)
Query: 59 ADKICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFK 118
A++ICKIL+K +S ++ L + SV++SP L+ EVL KLSNAGVLALS F WAE QKGFK
Sbjct: 66 AERICKILTKFTDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFK 125
Query: 119 HSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETF 178
H+T +++ALIE+LGKI+QFK+IW+LV+DMK +KLL+++T KVKEA+ F
Sbjct: 126 HTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKEAIGAF 185
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
KME++G K E SDFN+++D L KS++V AQ++FDKM+ + PD+KSYTILLEGW Q+
Sbjct: 186 HKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQE 245
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
NLLRV+EV REMK E FEPDVV YGI+INA+CKAKKY+EA+ F++EM+++N PSPHIF
Sbjct: 246 LNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIF 305
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
+LINGLGS+K+L++ALEF+E+ K++GF E PTYNA+VGAYCWS RM+DAY+ VDEM+
Sbjct: 306 CSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRL 365
Query: 359 CGVGPNSRTYDIILQ 373
GVGPN+RTYDIIL
Sbjct: 366 KGVGPNARTYDIILH 380
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 4/217 (1%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKV 171
K +GF+ ++ +I A K ++++ +M+QR + K+
Sbjct: 259 KDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKL 318
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+A+E FE+ + G E +N LV C S+ +E A + D+MR +G+ P+ ++Y I+
Sbjct: 319 NDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDII 378
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
L + Q EV + M CE P V TY I++ +C ++ D A+ + EM+ K +
Sbjct: 379 LHHLIRMQRSKEAYEVYQTMSCE---PTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGV 435
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAP 328
+P H+FS+LI L + +LDEA E++ + G P
Sbjct: 436 LPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRP 472
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 1/131 (0%)
Query: 262 TYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKF 321
T+ ++ Y +A+K EA+G +H+M+E F+ +++ L + + +A + ++K
Sbjct: 164 TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKM 223
Query: 322 KANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQPD-KGSKN 380
K F P+ +Y ++ + + + V EMK G P+ Y II+ K K
Sbjct: 224 KKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKY 283
Query: 381 PRSLLGFPENE 391
++ F E E
Sbjct: 284 EEAIRFFNEME 294
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 273 bits (697), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 133/324 (41%), Positives = 205/324 (63%), Gaps = 3/324 (0%)
Query: 59 ADKICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFK 118
A I K+L SP +D+AL + VS E+V +VLN+ NAG+L FF W+EKQ+ ++
Sbjct: 72 AKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYE 131
Query: 119 HSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETF 178
HS ++H +IE+ KIRQ+K++W+L+ M+++K+L +T KV EA+ F
Sbjct: 132 HSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAF 191
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
MEKY L P + FN L+ LCKSK+V KAQE+F+ MR R PD K+Y+ILLEGW ++
Sbjct: 192 NVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKE 250
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
NL + EV REM PD+VTY I+++ CKA + DEA+G M P+ I+
Sbjct: 251 PNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIY 310
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
S L++ G++ RL+EA++ + + + +G + +N+++GA+C + RM + YRV+ EMK
Sbjct: 311 SVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKS 370
Query: 359 CGVGPNSRTYDIILQP--DKGSKN 380
GV PNS++ +IIL+ ++G K+
Sbjct: 371 KGVTPNSKSCNIILRHLIERGEKD 394
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 91/164 (55%), Gaps = 1/164 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+++EAV+TF +ME+ G+K +V+ FN L+ CK+ ++ + +M+ +G+ P+ KS
Sbjct: 322 RLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCN 381
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
I+L ++ +V R+M C EPD TY ++I +C+ K+ + A + M++K
Sbjct: 382 IILRHLIERGEKDEAFDVFRKMIKVC-EPDADTYTMVIKMFCEKKEMETADKVWKYMRKK 440
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTY 333
+ PS H FS LINGL ++ +A E+ G P T+
Sbjct: 441 GVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTF 484
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 111/250 (44%), Gaps = 1/250 (0%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKME 182
+F+ L+ AL K + + + E+M+ R T + +A E F +M
Sbjct: 205 AFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMI 264
Query: 183 KYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLL 242
G P++ ++ +VD+LCK+ V++A + M P Y++L+ + + L
Sbjct: 265 DAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLE 324
Query: 243 RVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLI 302
+ EM+ + DV + LI A+CKA + EM+ K + P+ + ++
Sbjct: 325 EAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIIL 384
Query: 303 NGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVG 362
L DEA + + K P+ TY V+ +C M+ A +V M++ GV
Sbjct: 385 RHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVF 443
Query: 363 PNSRTYDIIL 372
P+ T+ +++
Sbjct: 444 PSMHTFSVLI 453
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 188 bits (478), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 185/322 (57%), Gaps = 12/322 (3%)
Query: 59 ADKICKIL----SKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQ 114
+KI +IL S+ P ++ AL + +++ P L+ VL++ +AG L FF WA KQ
Sbjct: 67 VEKIYRILRNHHSRVPK--LELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQ 124
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR--KLLTRDTXXXXXXXXXXXXKVK 172
G+ HS E +++ L K+RQF +W L+E+M++ +L+ + VK
Sbjct: 125 PGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVK 184
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+AVE ++M KYGL+P+ F L+D LCK+ SV++A ++F+ MR + P+L+ +T LL
Sbjct: 185 KAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLL 243
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
GW ++ L+ EV +MK EPD+V + L++ Y A K +A ++M+++
Sbjct: 244 YGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFE 303
Query: 293 PSPHIFSTLINGLG-SDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC-WSMRMDDAY 350
P+ + ++ LI L ++KR+DEA+ + + + G + TY A++ +C W M +D Y
Sbjct: 304 PNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGM-IDKGY 362
Query: 351 RVVDEMKQCGVGPNSRTYDIIL 372
V+D+M++ GV P+ TY I+
Sbjct: 363 SVLDDMRKKGVMPSQVTYMQIM 384
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 139/292 (47%), Gaps = 6/292 (2%)
Query: 85 VSPELVAEVLNKLSNAGVLALSFFHWAEKQK-GFKHSTESFHALIEALGKIRQFKVIWNL 143
+ PEL ++ + ++A ++ + E K G + F L++AL K K +
Sbjct: 165 IEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKV 224
Query: 144 VEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKS 203
EDM+++ K+ EA E +M++ GL+P++ F L+ +
Sbjct: 225 FEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHA 284
Query: 204 KSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCR---EMKCECFEPDV 260
+ A +L + MR RG P++ YT+L++ + + R++E R EM+ E D+
Sbjct: 285 GKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEK--RMDEAMRVFVEMERYGCEADI 342
Query: 261 VTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEK 320
VTY LI+ +CK D+ +M++K +MPS + ++ ++ +E LE EK
Sbjct: 343 VTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEK 402
Query: 321 FKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
K G P+ YN V+ C + +A R+ +EM+ G+ P T+ I++
Sbjct: 403 MKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMI 454
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 103/229 (44%), Gaps = 4/229 (1%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL--TRDTXXXXXXXXXXXXK 170
K+ G + F L+ + ++L+ DM++R +
Sbjct: 263 KEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKR 322
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ EA+ F +ME+YG + ++ + L+ CK ++K + D MR +G++P +Y
Sbjct: 323 MDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQ 382
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++ +++ E+ +MK PD++ Y ++I CK + EAV ++EM+
Sbjct: 383 IMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANG 442
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGF--APETPTYNAVV 337
+ P F +ING S L EA +++ + G AP+ T +++
Sbjct: 443 LSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLL 491
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 90/181 (49%), Gaps = 6/181 (3%)
Query: 196 LVDVLCKSKSVEKAQELFDKMRHRG---LVPDLKSYTILLEGWSQQQNLLRVNEVCREMK 252
+V +L K + L ++MR + P+L + +L+ ++ + + EV EM
Sbjct: 137 MVMILSKMRQFGAVWGLIEEMRKTNPELIEPEL--FVVLMRRFASANMVKKAVEVLDEMP 194
Query: 253 CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD 312
EPD +G L++A CK EA + +M+EK P+ F++L+ G + +L
Sbjct: 195 KYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLM 253
Query: 313 EALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
EA E + K G P+ + ++ Y + +M DAY ++++M++ G PN Y +++
Sbjct: 254 EAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLI 313
Query: 373 Q 373
Q
Sbjct: 314 Q 314
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 181 bits (459), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 183/324 (56%), Gaps = 3/324 (0%)
Query: 60 DKICKILSK--SPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGF 117
+++CK++ + + + ++A L ++ +++S +L+ EVL + +A A FF WA +++GF
Sbjct: 132 ERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGF 191
Query: 118 KHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVET 177
H + ++++++ L K RQF+ + +++E+M + LLT +T + K+AV
Sbjct: 192 AHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGI 251
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
FE M+KY K V N L+D L ++K ++AQ LFDK++ R P++ +YT+LL GW +
Sbjct: 252 FELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCR 310
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+NL+ + +M + +PD+V + +++ +++K +A+ +H M+ K P+
Sbjct: 311 VRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRS 370
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
++ +I ++ A+E+++ +G P+ Y ++ + ++D Y ++ EM+
Sbjct: 371 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ 430
Query: 358 QCGVGPNSRTYDIILQPDKGSKNP 381
+ G P+ +TY+ +++ K P
Sbjct: 431 EKGHPPDGKTYNALIKLMANQKMP 454
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 146/336 (43%), Gaps = 19/336 (5%)
Query: 73 TIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWA--------EKQKG-------- 116
T ++ ++ L+ E + VL ++ G+L + F A E++K
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMK 256
Query: 117 ---FKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKE 173
FK E+ + L+++LG+ + K L + +K+R T + E
Sbjct: 257 KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIE 316
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A + M GLKP++ N +++ L +S+ A +LF M+ +G P+++SYTI++
Sbjct: 317 AARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIR 376
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ +Q ++ E +M +PD Y LI + KK D EMQEK P
Sbjct: 377 DFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPP 436
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
++ LI + + K + A Y K N P T+N ++ +Y + + V
Sbjct: 437 DGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVW 496
Query: 354 DEMKQCGVGPNSRTYDIILQPDKGSKNPRSLLGFPE 389
+EM + G+ P+ +Y ++++ G R + E
Sbjct: 497 EEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLE 532
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 89/192 (46%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K +A++ F M+ G P V + ++ CK S+E A E FD M GL PD YT
Sbjct: 348 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 407
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G+ Q+ L V E+ +EM+ + PD TY LI K + A Y++M +
Sbjct: 408 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQN 467
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ PS H F+ ++ + + +E+ G P+ +Y ++ + +A
Sbjct: 468 EIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREA 527
Query: 350 YRVVDEMKQCGV 361
R ++EM G+
Sbjct: 528 CRYLEEMLDKGM 539
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 80/170 (47%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
++ A+E F+ M GL+P+ + + L+ K ++ EL +M+ +G PD K+Y
Sbjct: 384 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 443
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++ + Q+ + +M EP + T+ +++ +Y A+ Y+ + EM +K
Sbjct: 444 LIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKG 503
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
+ P + ++ LI GL + + EA + E+ G YN +
Sbjct: 504 ICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADF 553
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 182/324 (56%), Gaps = 3/324 (0%)
Query: 60 DKICKILSK--SPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGF 117
+++CK++ + + + ++A L ++ +++S +L+ EVL + +A A FF WA +++GF
Sbjct: 132 ERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGF 191
Query: 118 KHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVET 177
H++ ++++++ L K RQF+ + +++E+M + LLT +T + K+AV
Sbjct: 192 AHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGI 251
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
FE M+KY K V N L+D L ++K ++AQ LFDK++ R P++ +YT+LL GW +
Sbjct: 252 FELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCR 310
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+NL+ + +M +PD+V + +++ ++ K +A+ +H M+ K P+
Sbjct: 311 VRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRS 370
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
++ +I ++ A+E+++ +G P+ Y ++ + ++D Y ++ EM+
Sbjct: 371 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ 430
Query: 358 QCGVGPNSRTYDIILQPDKGSKNP 381
+ G P+ +TY+ +++ K P
Sbjct: 431 EKGHPPDGKTYNALIKLMANQKMP 454
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 141/320 (44%), Gaps = 19/320 (5%)
Query: 73 TIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWA--------EKQKG-------- 116
T ++ ++ L+ E + VL ++ G+L + F A E++K
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMK 256
Query: 117 ---FKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKE 173
FK E+ + L+++LG+ + K L + +K+R T + E
Sbjct: 257 KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIE 316
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A + M +GLKP++ N +++ L +S A +LF M+ +G P+++SYTI++
Sbjct: 317 AARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIR 376
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ +Q ++ E +M +PD Y LI + KK D EMQEK P
Sbjct: 377 DFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPP 436
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
++ LI + + K + Y K N P T+N ++ +Y + + V
Sbjct: 437 DGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVW 496
Query: 354 DEMKQCGVGPNSRTYDIILQ 373
DEM + G+ P+ +Y ++++
Sbjct: 497 DEMIKKGICPDDNSYTVLIR 516
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K +A++ F M+ G P V + ++ CK S+E A E FD M GL PD YT
Sbjct: 348 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 407
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G+ Q+ L V E+ +EM+ + PD TY LI K + Y++M +
Sbjct: 408 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQN 467
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ PS H F+ ++ + + +++ G P+ +Y ++ + +A
Sbjct: 468 EIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREA 527
Query: 350 YRVVDEMKQCGV 361
R ++EM G+
Sbjct: 528 CRYLEEMLDKGM 539
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 81/170 (47%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
++ A+E F+ M GL+P+ + + L+ K ++ EL +M+ +G PD K+Y
Sbjct: 384 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 443
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++ + Q+ + +M EP + T+ +++ +Y A+ Y+ + EM +K
Sbjct: 444 LIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKG 503
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
+ P + ++ LI GL S+ + EA + E+ G YN +
Sbjct: 504 ICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADF 553
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 181/324 (55%), Gaps = 3/324 (0%)
Query: 60 DKICKILSK--SPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGF 117
+++CK++ + + + ++A L ++ +++S +L+ EVL + +A A FF WA +++GF
Sbjct: 131 ERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGF 190
Query: 118 KHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVET 177
H + ++++++ L K RQF+ + +++E+M + LLT +T + K+AV
Sbjct: 191 AHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGI 250
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
FE M+KY K V N L+D L ++K ++AQ LFDK++ R P++ +YT+LL GW +
Sbjct: 251 FELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCR 309
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+NL+ + +M +PD+V + +++ ++ K +A+ +H M+ K P+
Sbjct: 310 VRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRS 369
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
++ +I ++ A+E+++ +G P+ Y ++ + ++D Y ++ EM+
Sbjct: 370 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ 429
Query: 358 QCGVGPNSRTYDIILQPDKGSKNP 381
+ G P+ +TY+ +++ K P
Sbjct: 430 EKGHPPDGKTYNALIKLMANQKMP 453
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 141/320 (44%), Gaps = 19/320 (5%)
Query: 73 TIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWA--------EKQKG-------- 116
T ++ ++ L+ E + VL ++ G+L + F A E++K
Sbjct: 196 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMK 255
Query: 117 ---FKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKE 173
FK E+ + L+++LG+ + K L + +K+R T + E
Sbjct: 256 KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIE 315
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A + M +GLKP++ N +++ L +S A +LF M+ +G P+++SYTI++
Sbjct: 316 AARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIR 375
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ +Q ++ E +M +PD Y LI + KK D EMQEK P
Sbjct: 376 DFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPP 435
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
++ LI + + K + Y K N P T+N ++ +Y + + V
Sbjct: 436 DGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVW 495
Query: 354 DEMKQCGVGPNSRTYDIILQ 373
DEM + G+ P+ +Y ++++
Sbjct: 496 DEMIKKGICPDDNSYTVLIR 515
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K +A++ F M+ G P V + ++ CK S+E A E FD M GL PD YT
Sbjct: 347 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 406
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G+ Q+ L V E+ +EM+ + PD TY LI K + Y++M +
Sbjct: 407 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQN 466
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ PS H F+ ++ + + +++ G P+ +Y ++ + +A
Sbjct: 467 EIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREA 526
Query: 350 YRVVDEMKQCGV 361
R ++EM G+
Sbjct: 527 CRYLEEMLDKGM 538
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 81/170 (47%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
++ A+E F+ M GL+P+ + + L+ K ++ EL +M+ +G PD K+Y
Sbjct: 383 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 442
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++ + Q+ + +M EP + T+ +++ +Y A+ Y+ + EM +K
Sbjct: 443 LIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKG 502
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
+ P + ++ LI GL S+ + EA + E+ G YN +
Sbjct: 503 ICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADF 552
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 165/319 (51%), Gaps = 7/319 (2%)
Query: 60 DKICKILSKSPNSTIDAA--LADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGF 117
DK+C L+K S D L+ V V+ LV +VL + SN A FF WA Q G+
Sbjct: 103 DKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGY 162
Query: 118 KHSTESFHALIEALGKIRQFKVIWNLVEDM---KQRKLLTRDTXXXXXXXXXXXXKVKEA 174
HS +++A+++ LGK R F ++W LV +M ++ KL+T DT K +A
Sbjct: 163 VHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKA 222
Query: 175 VETFEKMEK-YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
V+ F +MEK YG+K + N L+D L K S+E A E+F K+ + PD +++ IL+
Sbjct: 223 VDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKL-FDTIKPDARTFNILIH 281
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+ + + + MK F PDVVTY + AYCK + EM+E P
Sbjct: 282 GFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNP 341
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ ++ +++ LG K++ EAL YEK K +G P+ Y++++ + R DA +
Sbjct: 342 NVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIF 401
Query: 354 DEMKQCGVGPNSRTYDIIL 372
++M GV + Y+ ++
Sbjct: 402 EDMTNQGVRRDVLVYNTMI 420
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 117/293 (39%), Gaps = 48/293 (16%)
Query: 85 VSPELVAEVLNKLSNAGVL--ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFK---- 138
V+ + +++V+ +L+ +G A+ F EK G K T + ++L++AL K +
Sbjct: 201 VTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHE 260
Query: 139 VIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVD 198
V L + +K T K +A + M+ P+V + V+
Sbjct: 261 VFLKLFDTIKPDA----RTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVE 316
Query: 199 VLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEP 258
CK + E+ ++MR G P++ +YTI++
Sbjct: 317 AYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVM-------------------------- 350
Query: 259 DVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFY 318
++ K+K+ EA+G Y +M+E +P +S+LI+ L R +A E +
Sbjct: 351 ---------HSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIF 401
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ---CGVGPNSRTY 368
E G + YN ++ A R + A R++ M+ PN TY
Sbjct: 402 EDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETY 454
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 4/200 (2%)
Query: 193 FNKLVDVLCKSKSVEKAQELFDKMR--HRGLVPDLKSYTILLEGWSQQQNLLRVNEVCRE 250
+N +VDVL K ++ + EL ++M + L + + ++ ++ + + E
Sbjct: 169 YNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLE 228
Query: 251 M-KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDK 309
M K + D + L++A K + A + ++ + + P F+ LI+G +
Sbjct: 229 MEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPDARTFNILIHGFCKAR 287
Query: 310 RLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYD 369
+ D+A + K F P+ TY + V AYC +++EM++ G PN TY
Sbjct: 288 KFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYT 347
Query: 370 IILQPDKGSKNPRSLLGFPE 389
I++ SK LG E
Sbjct: 348 IVMHSLGKSKQVAEALGVYE 367
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 4/219 (1%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKM 181
++ + +EA K F+ + ++E+M++ T +V EA+ +EKM
Sbjct: 310 TYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKM 369
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG---WSQQ 238
++ G P+ ++ L+ +L K+ + A E+F+ M ++G+ D+ Y ++ S+
Sbjct: 370 KEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRD 429
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
+ LR+ + + + E P+V TY L+ C KK H M + ++ +
Sbjct: 430 EMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTY 489
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVV 337
LI GL +++EA F+E+ G P T +V
Sbjct: 490 ILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLV 528
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 169/337 (50%), Gaps = 8/337 (2%)
Query: 44 SGSLRIHTLIPHTPHA----DKICKILS--KSPNSTIDAALADLSVEVSPELVAEVLNKL 97
S S RI + + H P + ++I ++LS ++P ++ L S VS LV +VL +
Sbjct: 19 SQSFRIFSTLLHDPPSPDLVNEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRC 78
Query: 98 SNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL--LTR 155
N G A FF WA + F HS ES+H L+E LG +QF ++W+ + + ++ ++
Sbjct: 79 KNLGFPAHRFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISS 138
Query: 156 DTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDK 215
EA F +M ++G+KP V D ++L+ LC K V AQE F K
Sbjct: 139 KVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGK 198
Query: 216 MRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKK 275
+ G+VP K+Y+IL+ GW++ ++ +V EM D++ Y L++A CK+
Sbjct: 199 AKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGD 258
Query: 276 YDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNA 335
D + EM + P + F+ I+ + A + ++ K P T+N
Sbjct: 259 VDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNH 318
Query: 336 VVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
++ C + ++DDAY ++DEM Q G P++ TY+ I+
Sbjct: 319 IIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIM 355
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 7/174 (4%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V A + ++M++Y L P V FN ++ LCK++ V+ A L D+M +G PD +Y
Sbjct: 294 VHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNS 353
Query: 231 LLEGWSQQQNLLRVNEVCREM-KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ + R ++ M + +C PD TY +++ + ++D A + M E+
Sbjct: 354 IMAYHCDHCEVNRATKLLSRMDRTKCL-PDRHTYNMVLKLLIRIGRFDRATEIWEGMSER 412
Query: 290 NMMPSPHIFSTLINGLGSDK-RLDEALEFYEKFKANGFAPETPTY----NAVVG 338
P+ ++ +I+GL K +L+EA ++E G P + T N +VG
Sbjct: 413 KFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVG 466
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 174 bits (441), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 169/311 (54%), Gaps = 5/311 (1%)
Query: 64 KILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTES 123
K S+ P ++ AL + VE+ P L+ VLN+ +AG L FF WA KQ + HS E
Sbjct: 92 KFHSRVPK--LELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEV 149
Query: 124 FHALIEALGKIRQFKVIWNLVEDMKQR--KLLTRDTXXXXXXXXXXXXKVKEAVETFEKM 181
+ ++++ L K+RQF +W L+E+M++ +L+ + VK+A+E ++M
Sbjct: 150 YKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEM 209
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
K+G +P+ F L+D LCK SV+ A +LF+ MR R V +L+ +T LL GW + +
Sbjct: 210 PKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPV-NLRYFTSLLYGWCRVGKM 268
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
+ V +M FEPD+V Y L++ Y A K +A +M+ + P+ + ++ L
Sbjct: 269 MEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVL 328
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
I L R++EA++ + + + + TY A+V +C ++D Y V+D+M + G+
Sbjct: 329 IQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGL 388
Query: 362 GPNSRTYDIIL 372
P+ TY I+
Sbjct: 389 MPSELTYMHIM 399
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 100/214 (46%), Gaps = 1/214 (0%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVK 172
+ GF+ + L+ + ++L+ DM++R + +++
Sbjct: 280 EAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRME 339
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA++ F +ME+Y + +V + LV CK ++K + D M +GL+P +Y ++
Sbjct: 340 EAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIM 399
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
++++ E+ +M+ + PD+ Y ++I CK + EAV ++EM+E +
Sbjct: 400 VAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLS 459
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGF 326
P F +INGL S L EA + +++ G
Sbjct: 460 PGVDTFVIMINGLASQGCLLEASDHFKEMVTRGL 493
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 27/210 (12%)
Query: 122 ESFHALIEALGKIRQFKV-----IWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVE 176
ESF +E + K+RQ + I+N+V + + +VKEAV
Sbjct: 406 ESFEECLELMEKMRQIEYHPDIGIYNVVIRLACK-----------------LGEVKEAVR 448
Query: 177 TFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGL--VPDLKSYTILLEG 234
+ +ME+ GL P V F +++ L + +A + F +M RGL V + +LL
Sbjct: 449 LWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNT 508
Query: 235 WSQQQNLLRVNEV--CREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ + L +V C K C E +V+++ I I+A EA + EM E + M
Sbjct: 509 VLKDKKLEMAKDVWSCITSKGAC-ELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFM 567
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFK 322
P P F+ L+ GL + A E EK +
Sbjct: 568 PQPDTFAKLMKGLKKLYNREFAGEITEKVR 597
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 167/305 (54%), Gaps = 14/305 (4%)
Query: 77 ALADLSVEVSPELVAEVLNKLSNAG---VLALSFFHWAEKQKGFKHSTESFHALIEALGK 133
+L+ + +S +L+ VL ++ + + L F+ +A +GF HS+ S ++ LG+
Sbjct: 61 SLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYILGR 120
Query: 134 IRQFKVIWNLVEDMKQ--RKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVS 191
R+F IW L+ + K+ R L++ T V++ VE+F K ++ L P+
Sbjct: 121 NRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKR--LVPDFF 178
Query: 192 D---FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVC 248
D FN L+ LC+ KS+ A+ ++ ++H+ PDL+++ ILL GW + E
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSGWKSSEEAEAFFE-- 235
Query: 249 REMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSD 308
EMK + +PDVVTY LI+ YCK ++ ++A +M+E+ P ++T+I GLG
Sbjct: 236 -EMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 294
Query: 309 KRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
+ D+A E ++ K G P+ YNA + +C + R+ DA ++VDEM + G+ PN+ TY
Sbjct: 295 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 354
Query: 369 DIILQ 373
++ +
Sbjct: 355 NLFFR 359
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 88/182 (48%)
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
M+ GLKP+V +N L+DV CK + +EKA +L DKMR PD+ +YT ++ G
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
+ EV +EMK PDV Y I +C A++ +A EM +K + P+ ++
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
L L + E Y + N P T + ++ + ++D A R+ ++M G
Sbjct: 357 FFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
Query: 361 VG 362
G
Sbjct: 417 FG 418
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRK----LLTRDTXXXXXXXXXXX 168
K KG K ++++LI+ K R+ + + L++ M++ + ++T T
Sbjct: 238 KGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQP 297
Query: 169 XKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
K +E ++ +M++YG P+V+ +N + C ++ + A +L D+M +GL P+ +Y
Sbjct: 298 DKAREVLK---EMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 354
Query: 229 TILLEGWSQQQNLLRVNEV-CREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
+ S +L R E+ R + EC P+ + LI + + +K D A+ + +M
Sbjct: 355 NLFFRVLSLANDLGRSWELYVRMLGNECL-PNTQSCMFLIKMFKRHEKVDMAMRLWEDM 412
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 158/311 (50%), Gaps = 11/311 (3%)
Query: 70 PNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIE 129
P S++++AL + +E S ELV + ++LS++ +L S F WAE + GF S F +++
Sbjct: 84 PGSSLESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVN 143
Query: 130 ALGKIRQFKVIWNLVEDM----KQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKY- 184
+L K R+F++ W+LV D + L++ DT V++A+ FE Y
Sbjct: 144 SLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYE 203
Query: 185 ---GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM---RHRGLVPDLKSYTILLEGWSQQ 238
E+ L+D LCK V +A +++ VP ++ + ILL GW +
Sbjct: 204 PVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRS 263
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
+ L + ++ EMK +P VVTYG LI YC+ ++ A+ EM+ M + +F
Sbjct: 264 RKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVF 323
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
+ +I+GLG RL EAL E+F P TYN++V +C + + A +++ M
Sbjct: 324 NPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMT 383
Query: 359 CGVGPNSRTYD 369
GV P + TY+
Sbjct: 384 RGVDPTTTTYN 394
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 12/201 (5%)
Query: 183 KYGLKPEVSDFNKLVDVLCKSKSVEKAQEL-FDKMRH---RGLVPDLKSYTILLEGWSQQ 238
K G S F+ +V+ LCK++ E A L FD++R LV ++ +L+ +++
Sbjct: 128 KPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLV-SADTFIVLIRRYARA 186
Query: 239 ---QNLLRVNEVCREMKCEC-FEPDVVTYGILINAYCKAKKYDEAVGFYHEM---QEKNM 291
Q +R E R + C ++ +L++A CK EA + + + N
Sbjct: 187 GMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNW 246
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
+PS IF+ L+NG ++L +A + +E+ KA P TY ++ YC R+ A
Sbjct: 247 VPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAME 306
Query: 352 VVDEMKQCGVGPNSRTYDIIL 372
V++EMK + N ++ I+
Sbjct: 307 VLEEMKMAEMEINFMVFNPII 327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 63/141 (44%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A + + M G+ P + +N K E+ L+ K+ G PD +Y ++L+
Sbjct: 374 ASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILK 433
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ L +V +EMK +PD++T +LI+ C+ + +EA + + ++P
Sbjct: 434 MLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIP 493
Query: 294 SPHIFSTLINGLGSDKRLDEA 314
F + NGL S D A
Sbjct: 494 QYITFKMIDNGLRSKGMSDMA 514
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 164/315 (52%), Gaps = 11/315 (3%)
Query: 64 KILSKSPNSTIDAALADLSVE-----VSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFK 118
++LS P S +D A E + V E L SN AL FF+W E++ GF+
Sbjct: 19 RLLSVKPISNVDDAKFRSQEEEDQSSYDQKTVCEALTCYSNDWQKALEFFNWVERESGFR 78
Query: 119 HSTESFHALIEALGKIRQFKVIWNLVEDM--KQRKLLTRDTXXXXXXXXXXXXKVKEAVE 176
H+TE+F+ +I+ LGK +F++ W L+ M + T V+EA++
Sbjct: 79 HTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAID 138
Query: 177 TFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQEL-FDK--MRHRGLVPDLKSYTILLE 233
++K++ + L+ E S +N LVD LC+ K V +A+EL F K + + V + K + ++L
Sbjct: 139 AYDKLDDFNLRDETSFYN-LVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILR 197
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
GWS+ + E ++M E D+ +Y I ++ CK+ K +AV Y EM+ + M
Sbjct: 198 GWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKL 257
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
++T+I +G+ + ++ + + + + G P T+N ++ C RM DAYR++
Sbjct: 258 DVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRML 317
Query: 354 DEMKQCGVGPNSRTY 368
DEM + G P+S TY
Sbjct: 318 DEMPKRGCQPDSITY 332
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 32/223 (14%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
E ++KM+ G+ ++ ++ +D++CKS KA +L+ +M+ R + D+ +Y ++
Sbjct: 210 EYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAI 269
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSP 295
Q + V REM+ EP+V T+ +I C+ + +A EM ++ P
Sbjct: 270 GASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDS 329
Query: 296 HIFSTLINGL----------------GSDKRLDEALEFYEKFKANGF------------- 326
+ L + L G ++D + KF+ GF
Sbjct: 330 ITYMCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKE 389
Query: 327 ---APETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSR 366
P++ YNAV+ A +D A +EM + G+ P R
Sbjct: 390 SGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSPRRR 432
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 3/158 (1%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V+ + F +M + G +P V+ N ++ +LC+ + A + D+M RG PD +Y
Sbjct: 275 VEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMC 334
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L + +L + M P + TY +L+ + + + + M+E
Sbjct: 335 LFSRLEKPSEIL---SLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESG 391
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAP 328
P ++ +I+ L LD A E+ E+ G +P
Sbjct: 392 DTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 163/324 (50%), Gaps = 8/324 (2%)
Query: 57 PHADK--ICKILSKSPNSTIDAALADLSVEVSP---ELVAEVLNKLSNAGVLALSFFHWA 111
P AD I K++ SPN+T LS + +P LV VL +L N G AL FFH+
Sbjct: 21 PPADSAAIAKLILSSPNTTHQDDQFLLSTKTTPWTPNLVNSVLKRLWNHGPKALQFFHFL 80
Query: 112 EK-QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXX 169
+ + + H SF I+ ++ +W+L+ M+ ++ + T
Sbjct: 81 DNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAG 140
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K +AV+ F M ++G +++ FN ++DVLCKSK VEKA ELF +R R V D +Y
Sbjct: 141 KPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV-DTVTYN 199
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++L GW + + EV +EM P++ TY ++ + +A + A F+ EM+++
Sbjct: 200 VILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKR 259
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ ++T+++G G + A +++ G P TYNA++ C +++A
Sbjct: 260 DCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENA 319
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
+ +EM + G PN TY+++++
Sbjct: 320 VVMFEEMVRRGYEPNVTTYNVLIR 343
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 105/203 (51%), Gaps = 1/203 (0%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVK 172
++G + +++ +++ + Q + W +MK+R + T ++K
Sbjct: 223 ERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIK 282
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
A F++M + G+ P V+ +N ++ VLCK +VE A +F++M RG P++ +Y +L+
Sbjct: 283 RARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLI 342
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G R E+ + M+ E EP+ TY ++I Y + + ++A+G + +M + +
Sbjct: 343 RGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCL 402
Query: 293 PSPHIFSTLINGLGSDKRLDEAL 315
P+ ++ LI+G+ KR ++ +
Sbjct: 403 PNLDTYNILISGMFVRKRSEDMV 425
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 130/297 (43%), Gaps = 3/297 (1%)
Query: 78 LADLSVEVSPELVAEVLNKLSNAGV--LALSFFHWAEKQKGFKHSTESFHALIEALGKIR 135
+ L + SP+ A V + ++AG A+ F + F+ SF+ +++ L K +
Sbjct: 117 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQ-DLASFNTILDVLCKSK 175
Query: 136 QFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNK 195
+ + + L ++ R + T + +A+E ++M + G+ P ++ +N
Sbjct: 176 RVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNT 235
Query: 196 LVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCEC 255
++ ++ + A E F +M+ R D+ +YT ++ G+ + R V EM E
Sbjct: 236 MLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG 295
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
P V TY +I CK + AV + EM + P+ ++ LI GL
Sbjct: 296 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGE 355
Query: 316 EFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
E ++ + G P TYN ++ Y ++ A + ++M PN TY+I++
Sbjct: 356 ELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILI 412
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 84/179 (46%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+++ A E F +M+K + +V + +V + +++A+ +FD+M G++P + +Y
Sbjct: 245 QIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYN 304
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+++ ++ N+ + EM +EP+V TY +LI A ++ M+ +
Sbjct: 305 AMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENE 364
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
P+ ++ +I +++AL +EK + P TYN ++ R +D
Sbjct: 365 GCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 423
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 165/318 (51%), Gaps = 16/318 (5%)
Query: 69 SPNSTIDAALADLS----VEVSPELVAEVLNKLSNA--GV---LALSFFHWAEKQKGFKH 119
+P+ T+ A D S +VSP +V V+ K + G+ +L+FF+WA + + H
Sbjct: 89 NPSLTLHALSLDFSQIETSQVSPSVVRCVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDH 148
Query: 120 -STESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVET 177
S ++ +I+ GK+RQF + W+L++ MK R + ++ +T EAV
Sbjct: 149 KSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHC 208
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
F +ME YG P+ F+ ++ L + + +AQ FD ++ R PD+ YT L+ GW +
Sbjct: 209 FNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCR 267
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ +V +EMK EP+V TY I+I+A C+ + A + +M + P+
Sbjct: 268 AGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAIT 327
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM- 356
F+ L+ R ++ L+ Y + K G P+T TYN ++ A+C +++A +V++ M
Sbjct: 328 FNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMI 387
Query: 357 -KQCGVGPNSRTYDIILQ 373
K+C V N+ T++ I +
Sbjct: 388 KKKCEV--NASTFNTIFR 403
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 99/203 (48%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ EA + F++M+ G++P V ++ ++D LC+ + +A ++F M G P+ ++
Sbjct: 270 EISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFN 329
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ + +V +V +MK EPD +TY LI A+C+ + + AV + M +K
Sbjct: 330 NLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKK 389
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ F+T+ + + ++ A Y K P T TYN ++ + S D
Sbjct: 390 KCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMV 449
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
++ EM V PN TY +++
Sbjct: 450 LKMKKEMDDKEVEPNVNTYRLLV 472
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 3/205 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ A + F M G P FN L+ V K+ EK +++++M+ G PD +Y
Sbjct: 305 QISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYN 364
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+E + +NL +V M + E + T+ + K + + A Y +M E
Sbjct: 365 FLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEA 424
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P+ ++ L+ K D L+ ++ P TY +V +C ++A
Sbjct: 425 KCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNA 484
Query: 350 YRVVDEM--KQCGVGPNSRTYDIIL 372
Y++ EM ++C + P+ Y+++L
Sbjct: 485 YKLFKEMVEEKC-LTPSLSLYEMVL 508
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 153/291 (52%), Gaps = 2/291 (0%)
Query: 83 VEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWN 142
V +S LV ++L++ + AL WAE KG KHS++++ ++ LGK +++ +
Sbjct: 83 VNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKE 142
Query: 143 LVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCK 202
VE M+ KL+T +T + +EAV F+++ ++GL+ N L+D LCK
Sbjct: 143 FVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCK 202
Query: 203 SKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVT 262
K VE+A+ + +++ + P+ ++ I + GW + + +EMK F P V++
Sbjct: 203 EKRVEQARVVLLQLKSH-ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVIS 261
Query: 263 YGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFK 322
Y +I YC+ ++ + EM+ P+ ++T+++ L + K +EAL + K
Sbjct: 262 YTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMK 321
Query: 323 ANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD-EMKQCGVGPNSRTYDIIL 372
+G P++ YN ++ + R+++A RV EM + GV N+ TY+ ++
Sbjct: 322 RSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMI 372
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/338 (19%), Positives = 128/338 (37%), Gaps = 53/338 (15%)
Query: 85 VSPELVAEVLNKLSNAGVLALSFFHWAEK--------QKGFKHSTESFHALIEALGKIRQ 136
V+ VA+++ + + AG W E + G + +TES + L++ L K ++
Sbjct: 153 VTLNTVAKIMRRFAGAG-------EWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKR 205
Query: 137 FKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKL 196
+ ++ +K T +V+EA+ T ++M+ +G +P V + +
Sbjct: 206 VEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTI 265
Query: 197 VDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECF 256
+ C+ K E+ +M G P+ +YT ++ + Q+ V MK
Sbjct: 266 IRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGC 325
Query: 257 EPDVV------------------------------------TYGILINAYCKAKKYDEAV 280
+PD + TY +I YC + D+A+
Sbjct: 326 KPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAI 385
Query: 281 GFYHEMQEKNMM-PSPHIFSTLINGLGSDKRLDEALEFY-EKFKANGFAPETPTYNAVVG 338
EM+ N+ P H + L+ + E + E + + + TY ++
Sbjct: 386 ELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQ 445
Query: 339 AYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQPDK 376
C + + AY + +EM + P RT ++L+ K
Sbjct: 446 RLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVK 483
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 153/291 (52%), Gaps = 2/291 (0%)
Query: 83 VEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWN 142
V +S LV ++L++ + AL WAE KG KHS++++ ++ LGK +++ +
Sbjct: 83 VNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKE 142
Query: 143 LVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCK 202
VE M+ KL+T +T + +EAV F+++ ++GL+ N L+D LCK
Sbjct: 143 FVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCK 202
Query: 203 SKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVT 262
K VE+A+ + +++ + P+ ++ I + GW + + +EMK F P V++
Sbjct: 203 EKRVEQARVVLLQLKSH-ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVIS 261
Query: 263 YGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFK 322
Y +I YC+ ++ + EM+ P+ ++T+++ L + K +EAL + K
Sbjct: 262 YTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMK 321
Query: 323 ANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD-EMKQCGVGPNSRTYDIIL 372
+G P++ YN ++ + R+++A RV EM + GV N+ TY+ ++
Sbjct: 322 RSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMI 372
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/338 (19%), Positives = 128/338 (37%), Gaps = 53/338 (15%)
Query: 85 VSPELVAEVLNKLSNAGVLALSFFHWAEK--------QKGFKHSTESFHALIEALGKIRQ 136
V+ VA+++ + + AG W E + G + +TES + L++ L K ++
Sbjct: 153 VTLNTVAKIMRRFAGAG-------EWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKR 205
Query: 137 FKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKL 196
+ ++ +K T +V+EA+ T ++M+ +G +P V + +
Sbjct: 206 VEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTI 265
Query: 197 VDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECF 256
+ C+ K E+ +M G P+ +YT ++ + Q+ V MK
Sbjct: 266 IRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGC 325
Query: 257 EPDVV------------------------------------TYGILINAYCKAKKYDEAV 280
+PD + TY +I YC + D+A+
Sbjct: 326 KPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAI 385
Query: 281 GFYHEMQEKNMM-PSPHIFSTLINGLGSDKRLDEALEFY-EKFKANGFAPETPTYNAVVG 338
EM+ N+ P H + L+ + E + E + + + TY ++
Sbjct: 386 ELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQ 445
Query: 339 AYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQPDK 376
C + + AY + +EM + P RT ++L+ K
Sbjct: 446 RLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVK 483
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 158/347 (45%), Gaps = 53/347 (15%)
Query: 78 LADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQF 137
L DL++ +P V VL +L LA FF W+ + GFKHS ES+ + L R +
Sbjct: 101 LFDLTL--APIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMY 158
Query: 138 KVIWNLVEDMKQRK---------LLTRDTXXXXXXXXXXXXKV-------KEAVETFEKM 181
+++++M K TR+ V +EA++ F KM
Sbjct: 159 YDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKM 218
Query: 182 EKY-----------------------------------GLKPEVSDFNKLVDVLCKSKSV 206
+++ G +P V +N ++D +CK V
Sbjct: 219 KRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDV 278
Query: 207 EKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGIL 266
E A+ LF++M+ RGLVPD +Y +++G+ + L EMK C EPDV+TY L
Sbjct: 279 EAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNAL 338
Query: 267 INAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGF 326
IN +CK K + FY EM+ + P+ +STL++ + + +A++FY + G
Sbjct: 339 INCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL 398
Query: 327 APETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
P TY +++ A C + DA+R+ +EM Q GV N TY ++
Sbjct: 399 VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 445
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 132/273 (48%), Gaps = 7/273 (2%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR----KLLTRDTXXXXXXXXXXX 168
K +G T +++++I+ GK+ + E+MK ++T +
Sbjct: 289 KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG-- 346
Query: 169 XKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
K+ +E + +M+ GLKP V ++ LVD CK +++A + + MR GLVP+ +Y
Sbjct: 347 -KLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTY 405
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
T L++ + NL + EM E +VVTY LI+ C A++ EA + +M
Sbjct: 406 TSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDT 465
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
++P+ ++ LI+G K +D ALE + K G P+ Y + C +++
Sbjct: 466 AGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEA 525
Query: 349 AYRVVDEMKQCGVGPNSRTYDIILQPDKGSKNP 381
A V++EMK+CG+ NS Y ++ S NP
Sbjct: 526 AKVVMNEMKECGIKANSLIYTTLMDAYFKSGNP 558
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/405 (20%), Positives = 165/405 (40%), Gaps = 44/405 (10%)
Query: 8 KRFFN--LFSSNLPLSKPYPASLTPLSTSPTIKLPQNLSGSLRIHTLIPHT----PHADK 61
KRFF + + P Y + + ++ + L ++ L+P T D
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306
Query: 62 ICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSF-FHWAEKQKGFKHS 120
K+ + D+ E ++N G L + F+ K G K +
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366
Query: 121 TESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFE 179
S+ L++A K + DM++ L+ + T + +A
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
+M + G++ V + L+D LC ++ +++A+ELF KM G++P+L SY L+ G+ + +
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486
Query: 240 NLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
N+ R E+ E+K +PD++ YG I C +K + A +EM+E + + I++
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 546
Query: 300 T-----------------------------------LINGLGSDKRLDEALEFYEKFKAN 324
T LI+GL +K + +A++++ + +
Sbjct: 547 TLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISND 606
Query: 325 -GFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
G + A++ C +++ A + ++M Q G+ P+ Y
Sbjct: 607 FGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAY 651
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 129/299 (43%), Gaps = 39/299 (13%)
Query: 108 FHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXX 166
F+ ++ G + ++ +LI+A KI + L +M Q + T
Sbjct: 389 FYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC 448
Query: 167 XXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLK 226
++KEA E F KM+ G+ P ++ +N L+ K+K++++A EL ++++ RG+ PDL
Sbjct: 449 DAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLL 508
Query: 227 SYTILLEGWSQQQNLLRVNEVCREMKCEC------------------------------- 255
Y + G + + V EMK EC
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMK-ECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDE 567
Query: 256 -----FEPDVVTYGILINAYCKAKKYDEAVGFYHEM-QEKNMMPSPHIFSTLINGLGSDK 309
E VVT+ +LI+ CK K +AV +++ + + + + IF+ +I+GL D
Sbjct: 568 MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDN 627
Query: 310 RLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
+++ A +E+ G P+ Y +++ + +A + D+M + G+ + Y
Sbjct: 628 QVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAY 686
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 100/203 (49%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+++A++ + M + GL P + L+D CK ++ A L ++M G+ ++ +YT
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 442
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++G + + E+ +M P++ +Y LI+ + KAK D A+ +E++ +
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 502
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ P ++ T I GL S ++++ A + K G + Y ++ AY S +
Sbjct: 503 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 562
Query: 351 RVVDEMKQCGVGPNSRTYDIILQ 373
++DEMK+ + T+ +++
Sbjct: 563 HLLDEMKELDIEVTVVTFCVLID 585
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 134/316 (42%), Gaps = 37/316 (11%)
Query: 24 YPASLTPLSTSPTIKLPQNLSGSLRIHTLIPHTPHADKICKILSKSPNSTIDAALADLSV 83
Y A + L + +K + L G + +IP+ + + K+ N +D AL
Sbjct: 440 YTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN--MDRAL----- 492
Query: 84 EVSPELVAEVLNKLSNAGV----LALSFFHWA----------------EKQKGFKHSTES 123
E+LN+L G+ L F W K+ G K ++
Sbjct: 493 --------ELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 544
Query: 124 FHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFEKME 182
+ L++A K +L+++MK+ + +T T V +AV+ F ++
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 604
Query: 183 K-YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
+GL+ + F ++D LCK VE A LF++M +GLVPD +YT L++G +Q N+
Sbjct: 605 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
L + +M + D++ Y L+ + +A F EM + + P + ++
Sbjct: 665 LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISV 724
Query: 302 INGLGSDKRLDEALEF 317
+ +DEA+E
Sbjct: 725 LKKHYELGCIDEAVEL 740
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 60/127 (47%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V+ A FE+M + GL P+ + + L+D K +V +A L DKM G+ DL +YT
Sbjct: 628 QVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYT 687
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G S L + EM E PD V ++ + + DEAV + +
Sbjct: 688 SLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKH 747
Query: 290 NMMPSPH 296
++ S +
Sbjct: 748 QLLTSDN 754
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 152/301 (50%), Gaps = 7/301 (2%)
Query: 78 LADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQF 137
L + V+ S ELV E+L+++ N A +FF WA KQ+G+ S +H++I LGK+R+F
Sbjct: 118 LEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKF 177
Query: 138 KVIWNLVEDMKQR--KLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNK 195
W L+++M++ L+ T V +A+ TF +++ L+ + DF
Sbjct: 178 DTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQS 237
Query: 196 LVDVLCKSKSVEKAQELFDKMRHRGLVP-DLKSYTILLEGWSQQQNLLRVNE-VCREMKC 253
L+ LC+ K+V A L ++ P D KS+ I+L GW R E V EM
Sbjct: 238 LLSALCRYKNVSDAGHLI--FCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGN 295
Query: 254 ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDE 313
+ DVV+Y +I+ Y K ++ + + M+++ + P +++ +++ L + E
Sbjct: 296 VGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSE 355
Query: 314 ALEFYEKF-KANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
A + + G P TYN+++ C + + ++A +V DEM + G+ P RTY +
Sbjct: 356 ARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFM 415
Query: 373 Q 373
+
Sbjct: 416 R 416
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 105/215 (48%), Gaps = 5/215 (2%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEA 174
G KH S+ ++I K + L + MK+ + R V EA
Sbjct: 297 GVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEA 356
Query: 175 VETFEKMEK-YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
+ ME+ G++P V +N L+ LCK++ E+A+++FD+M +GL P +++Y +
Sbjct: 357 RNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR 416
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ + + R+M C EP V TY +LI C+ + +D + + EM+EK + P
Sbjct: 417 ILRTGEEVFELLAKMRKMGC---EPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGP 473
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAP 328
+ +I+GL + +++EA +Y++ K G P
Sbjct: 474 DLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRP 508
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 4/203 (1%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+EA + +M G+K +V ++ ++ K S+ K +LFD+M+ + PD K Y +
Sbjct: 284 REAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAV 343
Query: 232 LEGWSQQQNLLRVNEVCREMKCE-CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+ ++ + + + M+ E EP+VVTY LI CKA+K +EA + EM EK
Sbjct: 344 VHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKG 403
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ P+ + + L + +E E K + G P TY ++ C D+
Sbjct: 404 LFPTIRTYHAFMRILRTG---EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVL 460
Query: 351 RVVDEMKQCGVGPNSRTYDIILQ 373
+ DEMK+ VGP+ +Y +++
Sbjct: 461 LLWDEMKEKTVGPDLSSYIVMIH 483
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 135/261 (51%), Gaps = 1/261 (0%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKE 173
KG + + S++ +I L + + K + ++ +M +R L T +
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ 328
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+ +M ++GL P V + L+ +CK+ ++ +A E D+MR RGL P+ ++YT L++
Sbjct: 329 ALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+SQ+ + V REM F P VVTY LIN +C K ++A+ +M+EK + P
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP 448
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ST+++G +DEAL + G P+T TY++++ +C R +A +
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLY 508
Query: 354 DEMKQCGVGPNSRTYDIILQP 374
+EM + G+ P+ TY ++
Sbjct: 509 EEMLRVGLPPDEFTYTALINA 529
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 151/316 (47%), Gaps = 7/316 (2%)
Query: 60 DKICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKH 119
D+ ++ KS T D + SV +LV + ++LS ALS H A+ GF
Sbjct: 113 DEYASLVFKSLQETYDLCYSTSSV---FDLVVKSYSRLSLIDK-ALSIVHLAQAH-GFMP 167
Query: 120 STESFHALIEA-LGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVET 177
S++A+++A + R N+ ++M + ++ T + A+
Sbjct: 168 GVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTL 227
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
F+KME G P V +N L+D CK + ++ +L M +GL P+L SY +++ G +
Sbjct: 228 FDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCR 287
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ + V+ V EM + D VTY LI YCK + +A+ + EM + PS
Sbjct: 288 EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVIT 347
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
+++LI+ + ++ A+EF ++ + G P TY +V + M++AYRV+ EM
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407
Query: 358 QCGVGPNSRTYDIILQ 373
G P+ TY+ ++
Sbjct: 408 DNGFSPSVVTYNALIN 423
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 126/272 (46%), Gaps = 2/272 (0%)
Query: 103 LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXX 161
+AL+ F E KG + +++ LI+ K+R+ + L+ M + L +
Sbjct: 223 VALTLFDKME-TKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVV 281
Query: 162 XXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGL 221
++KE +M + G + +N L+ CK + +A + +M GL
Sbjct: 282 INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 341
Query: 222 VPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVG 281
P + +YT L+ + N+ R E +M+ P+ TY L++ + + +EA
Sbjct: 342 TPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYR 401
Query: 282 FYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
EM + PS ++ LING ++++A+ E K G +P+ +Y+ V+ +C
Sbjct: 402 VLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC 461
Query: 342 WSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
S +D+A RV EM + G+ P++ TY ++Q
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 120/267 (44%), Gaps = 1/267 (0%)
Query: 108 FHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXX 166
H + G S ++ +LI ++ K ++ M+ R L + T
Sbjct: 332 MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS 391
Query: 167 XXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLK 226
+ EA +M G P V +N L++ C + +E A + + M+ +GL PD+
Sbjct: 392 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 451
Query: 227 SYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
SY+ +L G+ + ++ V REM + +PD +TY LI +C+ ++ EA Y EM
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRM 346
+ P ++ LIN + L++AL+ + + G P+ TY+ ++ R
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 571
Query: 347 DDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+A R++ ++ P+ TY +++
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIE 598
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 21/222 (9%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+++A+ E M++ GL P+V ++ ++ C+S V++A + +M +G+ PD +Y+
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 489
Query: 230 ILLEGWSQQQNLLRVNEVC---REMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
L++G+ +Q+ R E C EM PD TY LINAYC ++A+ ++EM
Sbjct: 490 SLIQGFCEQR---RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYN------------ 334
EK ++P +S LINGL R EA K P TY+
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFK 606
Query: 335 ---AVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+++ +C M +A +V + M P+ Y+I++
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIH 648
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 134/318 (42%), Gaps = 27/318 (8%)
Query: 59 ADKICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFK 118
ADK L + P L LS +PE + +L K N L L F +WA + F
Sbjct: 25 ADKALTFLKRHPYQ-----LHHLSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFFT 79
Query: 119 HSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETF 178
+ + L K + +K L ED+ + L + A F
Sbjct: 80 LRCKCI--TLHILTKFKLYKTAQILAEDVAAKTL-----------------DDEYASLVF 120
Query: 179 EKM-EKYGLKPEVSD-FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG-W 235
+ + E Y L S F+ +V + ++KA + + G +P + SY +L+
Sbjct: 121 KSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATI 180
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSP 295
++N+ V +EM P+V TY ILI +C A D A+ + +M+ K +P+
Sbjct: 181 RSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNV 240
Query: 296 HIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDE 355
++TLI+G +++D+ + G P +YN V+ C RM + V+ E
Sbjct: 241 VTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTE 300
Query: 356 MKQCGVGPNSRTYDIILQ 373
M + G + TY+ +++
Sbjct: 301 MNRRGYSLDEVTYNTLIK 318
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 95/246 (38%), Gaps = 50/246 (20%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ KEA + +E+M + GL P+ + L++ C +EKA +L ++M +G++PD+ +Y+
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559
Query: 230 ILLEGWSQQQN-------LLRV-------------------------------------- 244
+L+ G ++Q LL++
Sbjct: 560 VLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKG 619
Query: 245 -----NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
++V M + +PD Y I+I+ +C+A +A Y EM + +
Sbjct: 620 MMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVI 679
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQC 359
L+ L + +++E + E +V MD V+ EM +
Sbjct: 680 ALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKD 739
Query: 360 GVGPNS 365
G PN
Sbjct: 740 GFLPNG 745
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 136/280 (48%), Gaps = 8/280 (2%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKE 173
KG+ S+ ++ + + +W L+E MK++ L K+ E
Sbjct: 275 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE 334
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A E F +M + G+ P+ + L+D CK + A + F +M R + PD+ +YT ++
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+ Q +++ ++ EM C+ EPD VT+ LIN YCKA +A ++ M + P
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ ++TLI+GL + LD A E + G P TYN++V C S +++A ++V
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 354 DEMKQCGVGPNSRTYDIIL-------QPDKGSKNPRSLLG 386
E + G+ ++ TY ++ + DK + + +LG
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 554
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 105/212 (49%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+K+A M + G P V + L+D LCK ++ A EL +M GL P++ +Y
Sbjct: 437 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 496
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++ G + N+ ++ E + D VTY L++AYCK+ + D+A EM K
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ P+ F+ L+NG L++ + A G AP T+N++V YC + A
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 616
Query: 351 RVVDEMKQCGVGPNSRTYDIILQPDKGSKNPR 382
+ +M GVGP+ +TY+ +++ ++N +
Sbjct: 617 AIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 648
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 99/203 (48%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++KEA ME G P+V ++ +V+ C+ ++K +L + M+ +GL P+ Y
Sbjct: 261 RIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYG 320
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ + L E EM + PD V Y LI+ +CK A F++EM +
Sbjct: 321 SIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR 380
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++ P ++ +I+G + EA + + + G P++ T+ ++ YC + M DA
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
+RV + M Q G PN TY ++
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLI 463
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 102/200 (51%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A E +M K GL+P + +N +V+ LCKS ++E+A +L + GL D +YT L++
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ + + + E+ +EM + +P +VT+ +L+N +C ++ + M K + P
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ F++L+ L A Y+ + G P+ TY +V +C + M +A+ +
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 354 DEMKQCGVGPNSRTYDIILQ 373
EMK G + TY ++++
Sbjct: 655 QEMKGKGFSVSVSTYSVLIK 674
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 105/201 (52%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA + F +M GL+P+ F +L++ CK+ ++ A + + M G P++ +YT L+
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+G ++ +L NE+ EM +P++ TY ++N CK+ +EAV E + +
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
++TL++ +D+A E ++ G P T+N ++ +C ++D ++
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Query: 353 VDEMKQCGVGPNSRTYDIILQ 373
++ M G+ PN+ T++ +++
Sbjct: 584 LNWMLAKGIAPNATTFNSLVK 604
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 99/215 (46%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
++EAV+ + E GL + + L+D CKS ++KAQE+ +M +GL P + ++ +
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 566
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ G+ L ++ M + P+ T+ L+ YC A Y +M +
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ P + L+ G + + EA +++ K GF+ TY+ ++ + + +A
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAR 686
Query: 351 RVVDEMKQCGVGPNSRTYDIILQPDKGSKNPRSLL 385
V D+M++ G+ + +D K P +++
Sbjct: 687 EVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIV 721
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 101/199 (50%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K A+ F + + G+ V+ +N ++ +C+ +++A L M +G PD+ SY+
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ G+ + L +V ++ MK + +P+ YG +I C+ K EA + EM +
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++P +++TLI+G + A +F+ + + P+ TY A++ +C M +A
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 350 YRVVDEMKQCGVGPNSRTY 368
++ EM G+ P+S T+
Sbjct: 406 GKLFHEMFCKGLEPDSVTF 424
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 123/303 (40%), Gaps = 25/303 (8%)
Query: 93 VLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR-K 151
VL K+ L L FF WA ++ + ES +I + KV +L+ +R K
Sbjct: 93 VLMKIKCDYRLVLDFFDWARSRR--DSNLESLCIVIHLAVASKDLKVAQSLISSFWERPK 150
Query: 152 LLTRDTXXXXXXXXXXXXK---------------------VKEAVETFEKMEKYGLKPEV 190
L D+ K ++EA FEKM YGL V
Sbjct: 151 LNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSV 210
Query: 191 SDFNKLVDVLCKS-KSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCR 249
N + L K A +F + G+ ++ SY I++ Q + + +
Sbjct: 211 DSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLL 270
Query: 250 EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDK 309
M+ + + PDV++Y ++N YC+ + D+ M+ K + P+ +I+ ++I L
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 310 RLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYD 369
+L EA E + + G P+T Y ++ +C + A + EM + P+ TY
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 370 IIL 372
I+
Sbjct: 391 AII 393
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 82/165 (49%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ +A E ++M GL+P + FN L++ C +E ++L + M +G+ P+ ++
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L++ + + NL + ++M PD TY L+ +CKA+ EA + EM+ K
Sbjct: 601 SLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYN 334
S +S LI G K+ EA E +++ + G A + ++
Sbjct: 661 GFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 62/122 (50%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+K A ++ M G+ P+ + LV CK++++++A LF +M+ +G + +Y++
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++G+ +++ L EV +M+ E D + + K K+ D V E+ E
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENY 731
Query: 291 MM 292
++
Sbjct: 732 LV 733
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 136/280 (48%), Gaps = 8/280 (2%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKE 173
KG+ S+ ++ + + +W L+E MK++ L K+ E
Sbjct: 275 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE 334
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A E F +M + G+ P+ + L+D CK + A + F +M R + PD+ +YT ++
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+ Q +++ ++ EM C+ EPD VT+ LIN YCKA +A ++ M + P
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ ++TLI+GL + LD A E + G P TYN++V C S +++A ++V
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 354 DEMKQCGVGPNSRTYDIIL-------QPDKGSKNPRSLLG 386
E + G+ ++ TY ++ + DK + + +LG
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 554
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 105/212 (49%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+K+A M + G P V + L+D LCK ++ A EL +M GL P++ +Y
Sbjct: 437 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 496
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++ G + N+ ++ E + D VTY L++AYCK+ + D+A EM K
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ P+ F+ L+NG L++ + A G AP T+N++V YC + A
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 616
Query: 351 RVVDEMKQCGVGPNSRTYDIILQPDKGSKNPR 382
+ +M GVGP+ +TY+ +++ ++N +
Sbjct: 617 AIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 648
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 99/203 (48%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++KEA ME G P+V ++ +V+ C+ ++K +L + M+ +GL P+ Y
Sbjct: 261 RIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYG 320
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ + L E EM + PD V Y LI+ +CK A F++EM +
Sbjct: 321 SIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR 380
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++ P ++ +I+G + EA + + + G P++ T+ ++ YC + M DA
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
+RV + M Q G PN TY ++
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLI 463
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 102/200 (51%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A E +M K GL+P + +N +V+ LCKS ++E+A +L + GL D +YT L++
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ + + + E+ +EM + +P +VT+ +L+N +C ++ + M K + P
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ F++L+ L A Y+ + G P+ TY +V +C + M +A+ +
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 354 DEMKQCGVGPNSRTYDIILQ 373
EMK G + TY ++++
Sbjct: 655 QEMKGKGFSVSVSTYSVLIK 674
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 105/201 (52%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA + F +M GL+P+ F +L++ CK+ ++ A + + M G P++ +YT L+
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+G ++ +L NE+ EM +P++ TY ++N CK+ +EAV E + +
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
++TL++ +D+A E ++ G P T+N ++ +C ++D ++
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Query: 353 VDEMKQCGVGPNSRTYDIILQ 373
++ M G+ PN+ T++ +++
Sbjct: 584 LNWMLAKGIAPNATTFNSLVK 604
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 99/215 (46%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
++EAV+ + E GL + + L+D CKS ++KAQE+ +M +GL P + ++ +
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 566
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ G+ L ++ M + P+ T+ L+ YC A Y +M +
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ P + L+ G + + EA +++ K GF+ TY+ ++ + + +A
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAR 686
Query: 351 RVVDEMKQCGVGPNSRTYDIILQPDKGSKNPRSLL 385
V D+M++ G+ + +D K P +++
Sbjct: 687 EVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIV 721
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 101/199 (50%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K A+ F + + G+ V+ +N ++ +C+ +++A L M +G PD+ SY+
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ G+ + L +V ++ MK + +P+ YG +I C+ K EA + EM +
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++P +++TLI+G + A +F+ + + P+ TY A++ +C M +A
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 350 YRVVDEMKQCGVGPNSRTY 368
++ EM G+ P+S T+
Sbjct: 406 GKLFHEMFCKGLEPDSVTF 424
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 123/303 (40%), Gaps = 25/303 (8%)
Query: 93 VLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR-K 151
VL K+ L L FF WA ++ + ES +I + KV +L+ +R K
Sbjct: 93 VLMKIKCDYRLVLDFFDWARSRR--DSNLESLCIVIHLAVASKDLKVAQSLISSFWERPK 150
Query: 152 LLTRDTXXXXXXXXXXXXK---------------------VKEAVETFEKMEKYGLKPEV 190
L D+ K ++EA FEKM YGL V
Sbjct: 151 LNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSV 210
Query: 191 SDFNKLVDVLCKS-KSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCR 249
N + L K A +F + G+ ++ SY I++ Q + + +
Sbjct: 211 DSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLL 270
Query: 250 EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDK 309
M+ + + PDV++Y ++N YC+ + D+ M+ K + P+ +I+ ++I L
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 310 RLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYD 369
+L EA E + + G P+T Y ++ +C + A + EM + P+ TY
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 370 IIL 372
I+
Sbjct: 391 AII 393
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 82/165 (49%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ +A E ++M GL+P + FN L++ C +E ++L + M +G+ P+ ++
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L++ + + NL + ++M PD TY L+ +CKA+ EA + EM+ K
Sbjct: 601 SLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYN 334
S +S LI G K+ EA E +++ + G A + ++
Sbjct: 661 GFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 62/122 (50%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+K A ++ M G+ P+ + LV CK++++++A LF +M+ +G + +Y++
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++G+ +++ L EV +M+ E D + + K K+ D V E+ E
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENY 731
Query: 291 MM 292
++
Sbjct: 732 LV 733
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 156/332 (46%), Gaps = 37/332 (11%)
Query: 77 ALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQ 136
AL + + +VL ++ N AL FF+W ++Q GFKH ++ ++ LG+ +Q
Sbjct: 316 ALHNFGFRMDAYQANQVLKQMDNYAN-ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQ 374
Query: 137 FKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNK 195
F I L+++M + T +KEA+ F +M++ G +P+ +
Sbjct: 375 FGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCT 434
Query: 196 LVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCEC 255
L+D+ K+ ++ A +++ +M+ GL PD +Y++++ + +L + + EM +
Sbjct: 435 LIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQG 494
Query: 256 FEPDVVTYGILINAYCKAKKY-----------------------------------DEAV 280
P++VT+ I+I + KA+ Y +EA
Sbjct: 495 CTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAE 554
Query: 281 GFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
G + EMQ KN +P ++ L++ G +D+A ++Y+ G P PT N+++ +
Sbjct: 555 GVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTF 614
Query: 341 CWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
RM +AY ++ M G+ P+ +TY ++L
Sbjct: 615 LRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%)
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
G K + + +V L ++K + +L D+M G P+ +Y L+ + + L
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLING 304
V +M+ EPD VTY LI+ + KA D A+ Y MQE + P +S +IN
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 305 LGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPN 364
LG L A + + G P T+N ++ + + + A ++ +M+ G P+
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533
Query: 365 SRTYDIILQ 373
TY I+++
Sbjct: 534 KVTYSIVME 542
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 101/208 (48%), Gaps = 4/208 (1%)
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM-RHRGLVPDLKSYTILLEGWSQ 237
E + +G + + N+ VL + + A F + R G D +YT ++ +
Sbjct: 315 EALHNFGFRMDAYQANQ---VLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGR 371
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ +N++ EM + +P+ VTY LI++Y +A EA+ +++MQE P
Sbjct: 372 AKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVT 431
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
+ TLI+ LD A++ Y++ + G +P+T TY+ ++ + + A+R+ EM
Sbjct: 432 YCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMV 491
Query: 358 QCGVGPNSRTYDIILQPDKGSKNPRSLL 385
G PN T++I++ ++N + L
Sbjct: 492 GQGCTPNLVTFNIMIALHAKARNYETAL 519
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 89/208 (42%), Gaps = 2/208 (0%)
Query: 98 SNAGVLALSFFHWAEKQK-GFKHSTESFHALIEALGKIRQFKVIWNLVEDM-KQRKLLTR 155
+ AG L ++ + Q+ G T ++ +I LGK L +M Q
Sbjct: 440 AKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNL 499
Query: 156 DTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDK 215
T + A++ + M+ G +P+ ++ +++VL +E+A+ +F +
Sbjct: 500 VTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAE 559
Query: 216 MRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKK 275
M+ + VPD Y +L++ W + N+ + + + M P+V T L++ + + +
Sbjct: 560 MQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHR 619
Query: 276 YDEAVGFYHEMQEKNMMPSPHIFSTLIN 303
EA M + PS ++ L++
Sbjct: 620 MSEAYNLLQSMLALGLHPSLQTYTLLLS 647
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 154/309 (49%), Gaps = 10/309 (3%)
Query: 74 IDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALG- 132
++ AL + SV+++ +V ++L +L A FF WA Q+ + H +++ +I+ L
Sbjct: 112 MEKALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILSS 171
Query: 133 ---KIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLK-- 187
K +QF+++ ++++ MK+ + V+ F K ++ +K
Sbjct: 172 TKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCERYLTHVQKFAKRKRIRVKTQ 231
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEV 247
PE++ FN L+D LCK V++ + L +MRHR + PD ++ +L GW + ++ + ++
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKL 290
Query: 248 CREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM---PSPHIFSTLING 304
EM +P+ TY I+ +C+A DEA + M K P+ F+ +I
Sbjct: 291 LEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVA 350
Query: 305 LGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPN 364
L + + +E E + + G P+ TY V+ C + ++D+AY+ +DEM G P+
Sbjct: 351 LAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPD 410
Query: 365 SRTYDIILQ 373
TY+ L+
Sbjct: 411 IVTYNCFLR 419
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 3/205 (1%)
Query: 171 VKEAVETFEKMEKYGLK---PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKS 227
V EA + F+ M G P F ++ L K+ E+ EL +M G +PD+ +
Sbjct: 319 VDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVST 378
Query: 228 YTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
Y ++EG + + + EM + + PD+VTY + C+ +K DEA+ Y M
Sbjct: 379 YKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMV 438
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
E PS ++ LI+ D A + + + TY A++ R
Sbjct: 439 ESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAK 498
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIIL 372
+A +++E+ G+ R +D L
Sbjct: 499 EACFLLEEVVNKGLKLPYRVFDSFL 523
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 153/325 (47%), Gaps = 3/325 (0%)
Query: 50 HTLIPHTPHADKICKILSKSP-NSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFF 108
+T + + IC +L P + + L+ LS + PE V VL +L + A+ +F
Sbjct: 27 YTFEGNRQTVNDICNVLETGPWGPSAENTLSALSFKPQPEFVIGVLRRLKDVN-RAIEYF 85
Query: 109 HWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXX 167
W E++ H ES+++L+ + + R F + ++ +M + +T
Sbjct: 86 RWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVK 145
Query: 168 XXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKS 227
K++E + + M K+ +P S + L+ + LF +M+ G P +
Sbjct: 146 ANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHL 205
Query: 228 YTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
+T L+ G++++ + + EMK + D+V Y + I+++ K K D A F+HE++
Sbjct: 206 FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIE 265
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
+ P ++++I L RLDEA+E +E + N P T YN ++ Y + + D
Sbjct: 266 ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFD 325
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIIL 372
+AY +++ + G P+ Y+ IL
Sbjct: 326 EAYSLLERQRAKGSIPSVIAYNCIL 350
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 146/270 (54%), Gaps = 13/270 (4%)
Query: 110 WAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXX 168
++ K++G T +++ +I+ K + + L+E+MK + T T
Sbjct: 576 YSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKI 635
Query: 169 XKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
++ EA FE+ + ++ V ++ L+D K +++A + +++ +GL P+L ++
Sbjct: 636 DRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTW 695
Query: 229 TILLEGWSQQQNLLRVNE--VC----REMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
LL+ + + +NE VC +E+KC P+ VTYGILIN CK +K+++A F
Sbjct: 696 NSLLDALVKAE---EINEALVCFQSMKELKCT---PNQVTYGILINGLCKVRKFNKAFVF 749
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
+ EMQ++ M PS ++T+I+GL + EA +++FKANG P++ YNA++
Sbjct: 750 WQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSN 809
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
R DA+ + +E ++ G+ +++T ++L
Sbjct: 810 GNRAMDAFSLFEETRRRGLPIHNKTCVVLL 839
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 104/196 (53%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
FE+++ P+ ++ L+ L K+ + ELF M+ +G V D ++Y I+++G+ +
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ + ++ EMK + FEP VVTYG +I+ K + DEA + E + K + + I
Sbjct: 600 CGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVI 659
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
+S+LI+G G R+DEA E+ G P T+N+++ A + +++A MK
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMK 719
Query: 358 QCGVGPNSRTYDIILQ 373
+ PN TY I++
Sbjct: 720 ELKCTPNQVTYGILIN 735
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 121/251 (48%), Gaps = 1/251 (0%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKE-AVETFEKM 181
+F +LI+ LGK+ + + + E M T KE + ++ M
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
P++ N +D + K+ EK + +F++++ R VPD +SY+IL+ G +
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFA 568
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
E+ MK + D Y I+I+ +CK K ++A EM+ K P+ + ++
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
I+GL RLDEA +E+ K+ Y++++ + R+D+AY +++E+ Q G+
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
Query: 362 GPNSRTYDIIL 372
PN T++ +L
Sbjct: 689 TPNLYTWNSLL 699
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 2/251 (0%)
Query: 124 FHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKME 182
++ I++ GK+ + + W +++ L + T ++ EAVE FE +E
Sbjct: 241 YNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLE 300
Query: 183 KYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLL 242
K P +N ++ + ++A L ++ R +G +P + +Y +L + +
Sbjct: 301 KNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVD 360
Query: 243 RVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLI 302
+V EMK + P++ TY ILI+ C+A K D A MQ+ + P+ + ++
Sbjct: 361 EALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMV 419
Query: 303 NGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVG 362
+ L ++LDEA +E+ P+ T+ +++ R+DDAY+V ++M
Sbjct: 420 DRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCR 479
Query: 363 PNSRTYDIILQ 373
NS Y +++
Sbjct: 480 TNSIVYTSLIK 490
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 102/200 (51%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
E E F M++ G + +N ++D CK V KA +L ++M+ +G P + +Y ++
Sbjct: 570 ETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVI 629
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+G ++ L + E K + E +VV Y LI+ + K + DEA E+ +K +
Sbjct: 630 DGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLT 689
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ + +++L++ L + ++EAL ++ K P TY ++ C + + A+
Sbjct: 690 PNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVF 749
Query: 353 VDEMKQCGVGPNSRTYDIIL 372
EM++ G+ P++ +Y ++
Sbjct: 750 WQEMQKQGMKPSTISYTTMI 769
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 127/296 (42%), Gaps = 35/296 (11%)
Query: 112 EKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKV 171
++ KG S +++ ++ L K+ + + E+MK+ T K+
Sbjct: 334 QRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKL 393
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
A E + M+K GL P V N +VD LCKS+ +++A +F++M ++ PD ++ L
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSL 453
Query: 232 LEGWSQQQNLLRVNEVCREM-KCECFEPDVV-------------------TYGILINAYC 271
++G + + +V +M +C +V Y +IN C
Sbjct: 454 IDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNC 513
Query: 272 ---------------KAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALE 316
KA + ++ + E++ + +P +S LI+GL +E E
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 573
Query: 317 FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+ K G +T YN V+ +C +++ AY++++EMK G P TY ++
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVI 629
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/226 (19%), Positives = 96/226 (42%), Gaps = 2/226 (0%)
Query: 91 AEVLNKLSNAGVLALSFFHWAE-KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQ 149
V++ L+ L ++ + E K K + + + +LI+ GK+ + + ++E++ Q
Sbjct: 626 GSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQ 685
Query: 150 RKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEK 208
+ L T ++ EA+ F+ M++ P + L++ LCK + K
Sbjct: 686 KGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNK 745
Query: 209 AQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILIN 268
A + +M+ +G+ P SYT ++ G ++ N+ + K PD Y +I
Sbjct: 746 AFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIE 805
Query: 269 AYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEA 314
+ +A + E + + + L++ L + L++A
Sbjct: 806 GLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 133/251 (52%), Gaps = 1/251 (0%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKE 173
+GF+ S +++ +L+ LGK R + L+++M+ L T K+ E
Sbjct: 217 EGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINE 276
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A E ++M+ G P+V + L+D LC ++ ++ A+E+F+KM+ PD +Y LL+
Sbjct: 277 AYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLD 336
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+S ++L V + EM+ + PDVVT+ IL++A CKA + EA M+++ ++P
Sbjct: 337 RFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILP 396
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ H ++TLI GL RLD+ALE + ++ G P TY + Y S A
Sbjct: 397 NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 456
Query: 354 DEMKQCGVGPN 364
++MK G+ PN
Sbjct: 457 EKMKTKGIAPN 467
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 107/201 (53%), Gaps = 1/201 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ EA + FE M YG +P + +N L++ K+ + A LF +M G+ PDLK+Y+
Sbjct: 906 RLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYS 965
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ-E 288
+L++ + +E+K PDVV Y ++IN K+ + +EA+ ++EM+
Sbjct: 966 VLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTS 1025
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
+ + P + +++LI LG ++EA + Y + + G P T+NA++ Y S + +
Sbjct: 1026 RGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEH 1085
Query: 349 AYRVVDEMKQCGVGPNSRTYD 369
AY V M G PN+ TY+
Sbjct: 1086 AYAVYQTMVTGGFSPNTGTYE 1106
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 140/309 (45%), Gaps = 44/309 (14%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEAL---GKIRQFKVIWNLVEDMKQRKLLTRDTXXX 160
+ S+F H+TE+ + ++EAL GK+ + ++ D+ Q++++ RDT
Sbjct: 101 SFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVF----DLMQKRIIKRDTNTY 156
Query: 161 XXXXXXXXXK--VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRH 218
K +K+A KM ++G +N L+ +L KS+ +A E++ +M
Sbjct: 157 LTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMIL 216
Query: 219 RGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDE 278
G P L++Y+ L+ G +++++ V + +EM+ +P+V T+ I I +A K +E
Sbjct: 217 EGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINE 276
Query: 279 AVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKA--------------- 323
A M ++ P ++ LI+ L + ++LD A E +EK K
Sbjct: 277 AYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLD 336
Query: 324 --------------------NGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGP 363
+G P+ T+ +V A C + +A+ +D M+ G+ P
Sbjct: 337 RFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILP 396
Query: 364 NSRTYDIIL 372
N TY+ ++
Sbjct: 397 NLHTYNTLI 405
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 107/199 (53%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+ETFEKM+ G+ P + N + L K+ +A+++F ++ GLVPD +Y ++++
Sbjct: 452 ALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK 511
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+S+ + ++ EM EPDV+ LIN KA + DEA + M+E + P
Sbjct: 512 CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 571
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ ++TL+ GLG + ++ EA+E +E G P T T+N + C + + A +++
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 631
Query: 354 DEMKQCGVGPNSRTYDIIL 372
+M G P+ TY+ I+
Sbjct: 632 FKMMDMGCVPDVFTYNTII 650
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 132/272 (48%), Gaps = 3/272 (1%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKV 171
K G +++ L++A GK + ++ L ++M + T V
Sbjct: 812 KSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNV 871
Query: 172 KEAVETF-EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+A++ + + M P + L+D L KS + +A++LF+ M G P+ Y I
Sbjct: 872 DDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNI 931
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ G+ + + + M E PD+ TY +L++ C + DE + ++ E++E
Sbjct: 932 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKAN-GFAPETPTYNAVVGAYCWSMRMDDA 349
+ P ++ +INGLG RL+EAL + + K + G P+ TYN+++ + +++A
Sbjct: 992 LNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEA 1051
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQPDKGSKNP 381
++ +E+++ G+ PN T++ +++ S P
Sbjct: 1052 GKIYNEIQRAGLEPNVFTFNALIRGYSLSGKP 1083
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 108/205 (52%), Gaps = 2/205 (0%)
Query: 171 VKEAVETFEKMEK-YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
V A FEK K G++P++ +N L+ L ++ +E AQ++F +++ G +PD+ +Y
Sbjct: 765 VSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYN 824
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHE-MQE 288
LL+ + + + + E+ +EM E + +T+ I+I+ KA D+A+ Y++ M +
Sbjct: 825 FLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSD 884
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
++ P+ + LI+GL RL EA + +E G P YN ++ + + D
Sbjct: 885 RDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADA 944
Query: 349 AYRVVDEMKQCGVGPNSRTYDIILQ 373
A + M + GV P+ +TY +++
Sbjct: 945 ACALFKRMVKEGVRPDLKTYSVLVD 969
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 112/243 (46%), Gaps = 1/243 (0%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQ-RKLLTRDTXXXXXXXXXXXXKVKEAVETFEKM 181
++ LI+AL R+ + E MK R R T + + + +M
Sbjct: 295 TYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEM 354
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
EK G P+V F LVD LCK+ + +A + D MR +G++P+L +Y L+ G + L
Sbjct: 355 EKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRL 414
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
E+ M+ +P TY + I+ Y K+ A+ + +M+ K + P+ +
Sbjct: 415 DDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNAS 474
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
+ L R EA + + K G P++ TYN ++ Y +D+A +++ EM + G
Sbjct: 475 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGC 534
Query: 362 GPN 364
P+
Sbjct: 535 EPD 537
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 99/236 (41%), Gaps = 35/236 (14%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA +T + M G+ P + +N L+ L + ++ A ELF M G+ P +Y + +
Sbjct: 381 EAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFI 440
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDV-------------------------------- 260
+ + + + + E +MK + P++
Sbjct: 441 DYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV 500
Query: 261 ---VTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEF 317
VTY +++ Y K + DEA+ EM E P + ++LIN L R+DEA +
Sbjct: 501 PDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKM 560
Query: 318 YEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+ + K P TYN ++ + ++ +A + + M Q G PN+ T++ +
Sbjct: 561 FMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFD 616
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 94/184 (51%), Gaps = 1/184 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ EA++ +M + G +P+V N L++ L K+ V++A ++F +M+ L P + +Y
Sbjct: 518 EIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYN 577
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
LL G + + E+ M + P+ +T+ L + CK + A+ +M +
Sbjct: 578 TLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDM 637
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+P ++T+I GL + ++ EA+ F+ + K + P+ T ++ + ++DA
Sbjct: 638 GCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCTLLPGVVKASLIEDA 696
Query: 350 YRVV 353
Y+++
Sbjct: 697 YKII 700
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 69/135 (51%), Gaps = 1/135 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMR-HRGLVPDLKSY 228
+V E + F+++++ GL P+V +N +++ L KS +E+A LF++M+ RG+ PDL +Y
Sbjct: 976 RVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTY 1035
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
L+ + ++ E++ EP+V T+ LI Y + K + A Y M
Sbjct: 1036 NSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVT 1095
Query: 289 KNMMPSPHIFSTLIN 303
P+ + L N
Sbjct: 1096 GGFSPNTGTYEQLPN 1110
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 157/329 (47%), Gaps = 6/329 (1%)
Query: 50 HTLIPHTPHADKICKIL--SKSPNSTIDAALADLSVEVSPELVAEVL--NKLSNAGVLAL 105
L+P +P +I +L S S S +D +++SP V+ VL +++ +A
Sbjct: 78 RNLLP-SPWVSQILNLLDGSASMESNLDGFCRKFLIKLSPNFVSFVLKSDEIREKPDIAW 136
Query: 106 SFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXX 164
SFF W+ KQK + H+ E + +L++ L + I + ++K+ + +T
Sbjct: 137 SFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKS 196
Query: 165 XXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPD 224
V+E + + KM++ G++P + +N L++ L + V+ A+ +F+ M + PD
Sbjct: 197 FGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPD 256
Query: 225 LKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYH 284
+ +Y +++G+ + + E R+M+ E D +TY +I A + V Y
Sbjct: 257 IVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQ 316
Query: 285 EMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSM 344
EM EK + PH FS +I GL + +L+E +E G P Y ++ Y S
Sbjct: 317 EMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSG 376
Query: 345 RMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
++DA R++ M G P+ TY +++
Sbjct: 377 SVEDAIRLLHRMIDEGFKPDVVTYSVVVN 405
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 110/200 (55%), Gaps = 1/200 (0%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
V +++M++ G++ F+ ++ LCK + + +F+ M +G P++ YT+L++
Sbjct: 311 CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLID 370
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+++ ++ + M E F+PDVVTY +++N CK + +EA+ ++H + +
Sbjct: 371 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAI 430
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ +S+LI+GLG R+DEA +E+ G ++ YNA++ A+ ++D+A +
Sbjct: 431 NSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALF 490
Query: 354 DEM-KQCGVGPNSRTYDIIL 372
M ++ G TY I+L
Sbjct: 491 KRMEEEEGCDQTVYTYTILL 510
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 103/202 (50%), Gaps = 1/202 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V++A+ +M G KP+V ++ +V+ LCK+ VE+A + F R GL + Y+
Sbjct: 378 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSS 437
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++G + + + EM + D Y LI+A+ K +K DEA+ + M+E+
Sbjct: 438 LIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEE 497
Query: 291 MM-PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ + ++ L++G+ + R +EAL+ ++ G P + A+ C S ++ A
Sbjct: 498 GCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARA 557
Query: 350 YRVVDEMKQCGVGPNSRTYDII 371
+++DE+ GV ++ D+I
Sbjct: 558 CKILDELAPMGVILDAACEDMI 579
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 102/238 (42%), Gaps = 10/238 (4%)
Query: 87 PELV--AEVLNKLSNAGVL--ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWN 142
P++V + V+N L G + AL +FH + G ++ + +LI+ LGK +
Sbjct: 395 PDVVTYSVVVNGLCKNGRVEEALDYFHTC-RFDGLAINSMFYSSLIDGLGKAGRVDEAER 453
Query: 143 LVEDMKQRKLLTRDTX--XXXXXXXXXXXKVKEAVETFEKMEKY-GLKPEVSDFNKLVDV 199
L E+M + K TRD+ KV EA+ F++ME+ G V + L+
Sbjct: 454 LFEEMSE-KGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSG 512
Query: 200 LCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPD 259
+ K E+A +L+D M +G+ P + L G + R ++ E+ D
Sbjct: 513 MFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILD 572
Query: 260 VVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEF 317
+IN CKA + EA + E+ I + +IN L + D A++
Sbjct: 573 AACED-MINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKL 629
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 158/332 (47%), Gaps = 37/332 (11%)
Query: 77 ALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQ 136
AL +L + + +VL ++++ G AL FF+W ++Q GFKH ++ ++ LG+ +Q
Sbjct: 321 ALQNLGLRIDAYQANQVLKQMNDYGN-ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQ 379
Query: 137 FKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNK 195
F I L+++M + T + EA+ F +M++ G KP+ +
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439
Query: 196 LVDVLCKSKSVEKAQELFDKMRHRGLVPD------------------------------- 224
L+D+ K+ ++ A +++ +M+ GL PD
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 225 ----LKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAV 280
L +Y I+++ ++ +N ++ R+M+ FEPD VTY I++ +EA
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 281 GFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
+ EMQ+KN +P ++ L++ G +++A ++Y+ G P PT N+++ +
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTF 619
Query: 341 CWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
++ +AY ++ M G+ P+ +TY ++L
Sbjct: 620 LRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM-RHRGLVPDLKSYTILLEGWSQ 237
E ++ GL+ + N+ VL + A F + R G D +YT ++ +
Sbjct: 320 EALQNLGLRIDAYQANQ---VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGR 376
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ +N++ EM + +P+ VTY LI++Y +A +EA+ +++MQE P
Sbjct: 377 AKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVT 436
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
+ TLI+ LD A++ Y++ +A G +P+T TY+ ++ + + A+++ EM
Sbjct: 437 YCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV 496
Query: 358 QCGVGPNSRTYDIILQPDKGSKNPRSLL 385
G PN TY+I++ ++N ++ L
Sbjct: 497 DQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%)
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
G K + + +V L ++K +L D+M G P+ +Y L+ + + L
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLING 304
V +M+ +PD VTY LI+ + KA D A+ Y MQ + P +S +IN
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 305 LGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPN 364
LG L A + + + G P TYN ++ + + +A ++ +M+ G P+
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 365 SRTYDIILQ 373
TY I+++
Sbjct: 539 KVTYSIVME 547
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 92/211 (43%), Gaps = 8/211 (3%)
Query: 98 SNAGVLALSFFHWAEKQKG-FKHSTESFHALIEALGKIRQF----KVIWNLVEDMKQRKL 152
+ AG L ++ + Q G T ++ +I LGK K+ +V+ L
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 153 LTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQEL 212
+T + + A++ + M+ G +P+ ++ +++VL +E+A+ +
Sbjct: 505 VTYNIMMDLHAKAR---NYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAV 561
Query: 213 FDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCK 272
F +M+ + +PD Y +L++ W + N+ + + + M P+V T L++ + +
Sbjct: 562 FTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLR 621
Query: 273 AKKYDEAVGFYHEMQEKNMMPSPHIFSTLIN 303
K EA M + PS ++ L++
Sbjct: 622 VNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 158/332 (47%), Gaps = 37/332 (11%)
Query: 77 ALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQ 136
AL +L + + +VL ++++ G AL FF+W ++Q GFKH ++ ++ LG+ +Q
Sbjct: 321 ALQNLGLRIDAYQANQVLKQMNDYGN-ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQ 379
Query: 137 FKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNK 195
F I L+++M + T + EA+ F +M++ G KP+ +
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439
Query: 196 LVDVLCKSKSVEKAQELFDKMRHRGLVPD------------------------------- 224
L+D+ K+ ++ A +++ +M+ GL PD
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 225 ----LKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAV 280
L +Y I+++ ++ +N ++ R+M+ FEPD VTY I++ +EA
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 281 GFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
+ EMQ+KN +P ++ L++ G +++A ++Y+ G P PT N+++ +
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTF 619
Query: 341 CWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
++ +AY ++ M G+ P+ +TY ++L
Sbjct: 620 LRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM-RHRGLVPDLKSYTILLEGWSQ 237
E ++ GL+ + N+ VL + A F + R G D +YT ++ +
Sbjct: 320 EALQNLGLRIDAYQANQ---VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGR 376
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ +N++ EM + +P+ VTY LI++Y +A +EA+ +++MQE P
Sbjct: 377 AKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVT 436
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
+ TLI+ LD A++ Y++ +A G +P+T TY+ ++ + + A+++ EM
Sbjct: 437 YCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV 496
Query: 358 QCGVGPNSRTYDIILQPDKGSKNPRSLL 385
G PN TY+I++ ++N ++ L
Sbjct: 497 DQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%)
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
G K + + +V L ++K +L D+M G P+ +Y L+ + + L
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLING 304
V +M+ +PD VTY LI+ + KA D A+ Y MQ + P +S +IN
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 305 LGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPN 364
LG L A + + + G P TYN ++ + + +A ++ +M+ G P+
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 365 SRTYDIILQ 373
TY I+++
Sbjct: 539 KVTYSIVME 547
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 92/211 (43%), Gaps = 8/211 (3%)
Query: 98 SNAGVLALSFFHWAEKQKG-FKHSTESFHALIEALGKIRQF----KVIWNLVEDMKQRKL 152
+ AG L ++ + Q G T ++ +I LGK K+ +V+ L
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 153 LTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQEL 212
+T + + A++ + M+ G +P+ ++ +++VL +E+A+ +
Sbjct: 505 VTYNIMMDLHAKAR---NYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAV 561
Query: 213 FDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCK 272
F +M+ + +PD Y +L++ W + N+ + + + M P+V T L++ + +
Sbjct: 562 FTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLR 621
Query: 273 AKKYDEAVGFYHEMQEKNMMPSPHIFSTLIN 303
K EA M + PS ++ L++
Sbjct: 622 VNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 159/334 (47%), Gaps = 37/334 (11%)
Query: 75 DAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKI 134
+ AL +L + + +VL ++++ G AL FF+W ++Q GFKH ++ ++ LG+
Sbjct: 319 EEALQNLGLRIDAYQANQVLKQMNDYGN-ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRA 377
Query: 135 RQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDF 193
+QF I L+++M + T + EA+ F +M++ G KP+ +
Sbjct: 378 KQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTY 437
Query: 194 NKLVDVLCKSKSVEKAQELFDKMRHRGLVPD----------------------------- 224
L+D+ K+ ++ A +++ +M+ GL PD
Sbjct: 438 CTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVD 497
Query: 225 ------LKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDE 278
L +Y I+++ ++ +N ++ R+M+ FEPD VTY I++ +E
Sbjct: 498 QGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEE 557
Query: 279 AVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVG 338
A + EMQ+KN +P ++ L++ G +++A ++Y+ G P PT N+++
Sbjct: 558 AEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Query: 339 AYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+ ++ +AY ++ M G+ P+ +TY ++L
Sbjct: 618 TFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM-RHRGLVPDLKSYTILLEGWSQ 237
E ++ GL+ + N+ VL + A F + R G D +YT ++ +
Sbjct: 320 EALQNLGLRIDAYQANQ---VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGR 376
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ +N++ EM + +P+ VTY LI++Y +A +EA+ +++MQE P
Sbjct: 377 AKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVT 436
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
+ TLI+ LD A++ Y++ +A G +P+T TY+ ++ + + A+++ EM
Sbjct: 437 YCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV 496
Query: 358 QCGVGPNSRTYDIILQPDKGSKNPRSLL 385
G PN TY+I++ ++N ++ L
Sbjct: 497 DQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%)
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
G K + + +V L ++K +L D+M G P+ +Y L+ + + L
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLING 304
V +M+ +PD VTY LI+ + KA D A+ Y MQ + P +S +IN
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 305 LGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPN 364
LG L A + + + G P TYN ++ + + +A ++ +M+ G P+
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 365 SRTYDIILQ 373
TY I+++
Sbjct: 539 KVTYSIVME 547
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 92/211 (43%), Gaps = 8/211 (3%)
Query: 98 SNAGVLALSFFHWAEKQKG-FKHSTESFHALIEALGKIRQF----KVIWNLVEDMKQRKL 152
+ AG L ++ + Q G T ++ +I LGK K+ +V+ L
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 153 LTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQEL 212
+T + + A++ + M+ G +P+ ++ +++VL +E+A+ +
Sbjct: 505 VTYNIMMDLHAKAR---NYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAV 561
Query: 213 FDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCK 272
F +M+ + +PD Y +L++ W + N+ + + + M P+V T L++ + +
Sbjct: 562 FTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLR 621
Query: 273 AKKYDEAVGFYHEMQEKNMMPSPHIFSTLIN 303
K EA M + PS ++ L++
Sbjct: 622 VNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 151/298 (50%), Gaps = 18/298 (6%)
Query: 87 PELV--AEVLNKLSNAGV--LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWN 142
P +V ++VL+K++ + L +S FH E G H S++ +I L + +F + +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVC-GIGHDLYSYNIVINCLCRCSRFVIALS 125
Query: 143 LVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLC 201
+V M + T +V +A++ KME+ G +P+V +N ++D C
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185
Query: 202 KSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG------WSQQQNLLRVNEVCREMKCEC 255
K V A ELFD+M G+ D +Y L+ G WS L+R + V R++
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR-DMVMRDIV--- 241
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
P+V+T+ +I+ + K K+ EA+ Y EM + + P +++LINGL R+DEA
Sbjct: 242 --PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 299
Query: 316 EFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+ + G P+ TYN ++ +C S R+D+ ++ EM Q G+ ++ TY+ I+Q
Sbjct: 300 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ 357
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 106/202 (52%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
++E ++ F KM + P + DF+K++ + KSK+ + LF M G+ DL SY I
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++ + + V +M +EPDVVT LIN +C+ + +A+ +M+E
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P I++T+I+G +++A+E +++ + +G + TYN++V C S R DA
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 351 RVVDEMKQCGVGPNSRTYDIIL 372
R++ +M + PN T+ ++
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVI 251
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 130/270 (48%), Gaps = 5/270 (1%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXX 162
A+ F E+ G + ++++L+ L ++ L+ DM R ++ T
Sbjct: 193 AVELFDRMERD-GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
K EA++ +E+M + + P+V +N L++ LC V++A+++ D M +G +
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 311
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
PD+ +Y L+ G+ + + + ++ REM D +TY +I Y +A + D A
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
+ M + P+ +S L+ GL + R+++AL +E + + + TYN V+ C
Sbjct: 372 FSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 428
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
++DA+ + + G+ P+ +Y ++
Sbjct: 429 IGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 458
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 114/243 (46%), Gaps = 6/243 (2%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXKVKEAVETFEK 180
+F A+I+ K +F L E+M R+ + D T +V EA + +
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEM-TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
M G P+V +N L++ CKSK V++ +LF +M RGLV D +Y +++G+ Q
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
E+ M P++ TY IL+ C + ++A+ + MQ+ + ++
Sbjct: 365 PDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNI 421
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
+I+G+ +++A + + G P+ +Y ++ +C + D + + +M++ G
Sbjct: 422 VIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481
Query: 361 VGP 363
+ P
Sbjct: 482 LLP 484
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 89/180 (49%), Gaps = 4/180 (2%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKE 173
KG +++ LI K ++ L +M QR L+ T +
Sbjct: 308 KGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDA 367
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A E F +M+ +P + ++ L+ LC + VEKA LF+ M+ + D+ +Y I++
Sbjct: 368 AQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIH 424
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G + N+ ++ R + C+ +PDVV+Y +I+ +C+ +++D++ Y +MQE ++P
Sbjct: 425 GMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%)
Query: 203 SKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVT 262
S ++E+ +LF KM +P + ++ +L ++ +N V + M+ D+ +
Sbjct: 47 SMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYS 106
Query: 263 YGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFK 322
Y I+IN C+ ++ A+ +M + P S+LING R+ +A++ K +
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166
Query: 323 ANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYD 369
GF P+ YN ++ C ++DA + D M++ GV ++ TY+
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYN 213
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 151/305 (49%), Gaps = 4/305 (1%)
Query: 72 STIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEAL 131
S I +L+ L + +S ++VA+VLN+ + +G ++FF WA ++ G S+ ++ AL
Sbjct: 102 SAIQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRAL 161
Query: 132 GKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEV 190
G+ + F + ++++ M + + V+ A+E FE+ E +G+K
Sbjct: 162 GRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCST 221
Query: 191 SDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVP-DLKSYTILLEGWSQQQNLLRVNEVCR 249
FN L+ LC+ V A+ +F+ +G +P D SY I++ GWS+ + + +V +
Sbjct: 222 ESFNALLRCLCERSHVSAAKSVFNA--KKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLK 279
Query: 250 EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDK 309
EM F PD ++Y LI + + +++V + ++ K +P ++++ +I S +
Sbjct: 280 EMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISAR 339
Query: 310 RLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYD 369
DE++ +Y + P TY+ +V ++ DA + +EM GV P +
Sbjct: 340 DFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVT 399
Query: 370 IILQP 374
L+P
Sbjct: 400 SFLKP 404
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 112/257 (43%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAV 175
G K STESF+AL+ L + ++ K + +V+E
Sbjct: 216 GVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEME 275
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
+ ++M + G P+ ++ L++ L ++ + + E+FD ++H+G VPD Y ++ +
Sbjct: 276 KVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNF 335
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSP 295
++ R M E EP++ TY L++ K +K +A+ + EM + ++P+
Sbjct: 336 ISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTT 395
Query: 296 HIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDE 355
+ ++ + L S A+ Y+K + G Y ++ + V DE
Sbjct: 396 GLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDE 455
Query: 356 MKQCGVGPNSRTYDIIL 372
M++ G + Y+ I+
Sbjct: 456 MQESGYPSDVEVYEYIV 472
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 108/259 (41%), Gaps = 7/259 (2%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR-KLLTRDTXXXXXXXXXXXXKVK 172
+ GF S+ LIE LG+ + + +++K + + +
Sbjct: 283 ESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFD 342
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
E++ + +M +P + ++KLV L K + V A E+F++M RG++P T L
Sbjct: 343 ESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFL 402
Query: 233 E---GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+ + + + + R+ C E Y +L+ + K + + EMQE
Sbjct: 403 KPLCSYGPPHAAMVIYQKSRKAGCRISES---AYKLLLKRLSRFGKCGMLLNVWDEMQES 459
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++ +++GL L+ A+ E+ GF P Y+ + S + + A
Sbjct: 460 GYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELA 519
Query: 350 YRVVDEMKQCGVGPNSRTY 368
Y++ ++K+ N+R++
Sbjct: 520 YKLFLKIKKARATENARSF 538
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 164/340 (48%), Gaps = 18/340 (5%)
Query: 46 SLRIHTLIPHTPHA--DKICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVL 103
+L +H +I H + +KI +IL K ++++ ELV EV+N+ +
Sbjct: 78 ALDVHNIIKHHRGSSPEKIKRILDKC------------GIDLTEELVLEVVNRNRSDWKP 125
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRK-LLTRDTXXXXX 162
A KQ S+ ++ +++ LGK+R+F+ + ++M +R + T
Sbjct: 126 AYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLL 185
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
KV EAV FE+ +++G+ ++ F+ L+ LC+ K VE A+ LF R R
Sbjct: 186 NRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCS-RRREFG 244
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
D+K+ ++L GW N+ +++ PDVV+YG +INA K K +A+
Sbjct: 245 CDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMEL 304
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
Y M + P I + +I+ L KR+ EALE + + G P TYN+++ C
Sbjct: 305 YRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCK 364
Query: 343 SMRMDDAYRVVDEMKQCG--VGPNSRTYDIILQPDKGSKN 380
R + + +V+EM+ G PN T+ +L+ + SK+
Sbjct: 365 IRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKD 404
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 85/165 (51%), Gaps = 5/165 (3%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRG--LVPDLKS 227
++ EA+E F ++ + G P V +N L+ LCK + EK EL ++M +G P+ +
Sbjct: 332 RIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVT 391
Query: 228 YTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
++ LL+ + +++ V E + KCE D+ Y ++ Y + K ++ + EM+
Sbjct: 392 FSYLLKYSQRSKDVDIVLERMAKNKCE-MTSDL--YNLMFRLYVQWDKEEKVREIWSEME 448
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPT 332
+ P ++ I+GL + ++ EAL ++++ + G PE T
Sbjct: 449 RSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 145/284 (51%), Gaps = 4/284 (1%)
Query: 93 VLNKLSNAG--VLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR 150
VLN+L +G LAL F E ++ K S + +I++L K F +L +M+ +
Sbjct: 216 VLNRLCKSGNSALALDLFRKME-ERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
Query: 151 KLLTRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKA 209
+ T K + + +M + P+V F+ L+DV K + +A
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Query: 210 QELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINA 269
+EL+++M RG+ PD +Y L++G+ ++ L N++ M + EPD+VTY ILIN+
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 270 YCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPE 329
YCKAK+ D+ + + E+ K ++P+ ++TL+ G +L+ A E +++ + G P
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 454
Query: 330 TPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
TY ++ C + ++ A + ++M++ + Y+II+
Sbjct: 455 VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 498
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 164/338 (48%), Gaps = 6/338 (1%)
Query: 53 IPHTPHADKICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVL--ALSFFHW 110
+ + P +++CK + + + + + +++ S + V++ L G ALS F+
Sbjct: 211 VTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNE 270
Query: 111 AEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXX 169
E KG K ++ +LI L ++ ++ +M R ++ T
Sbjct: 271 ME-MKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEG 329
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ EA E + +M G+ P+ +N L+D CK + +A ++FD M +G PD+ +Y+
Sbjct: 330 KLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYS 389
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL+ + + + + + RE+ + P+ +TY L+ +C++ K + A + EM +
Sbjct: 390 ILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR 449
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ PS + L++GL + L++ALE +EK + + YN ++ C + ++DDA
Sbjct: 450 GVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDA 509
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQP--DKGSKNPRSLL 385
+ + + GV P+ TY++++ KGS + +L
Sbjct: 510 WSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 547
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 111/206 (53%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA + F+ M G +P++ ++ L++ CK+K V+ LF ++ +GL+P+ +Y L+
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G+ Q L E+ +EM P VVTYGIL++ C + ++A+ + +MQ+ M
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
I++ +I+G+ + ++D+A + G P+ TYN ++G C + +A +
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 547
Query: 353 VDEMKQCGVGPNSRTYDIILQPDKGS 378
+MK+ G P+ TY+I+++ G
Sbjct: 548 FRKMKEDGCTPDDFTYNILIRAHLGG 573
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 128/261 (49%), Gaps = 5/261 (1%)
Query: 116 GFKHSTESFHALIEAL---GKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVK 172
G++ T +F L+ G++ + + + + +MKQR L T +V
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLV--TVSTLINGLCLKGRVS 192
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA+ ++M +YG +P+ + +++ LCKS + A +LF KM R + + Y+I++
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ + + + EM+ + + DVVTY LI C K+D+ EM +N++
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P FS LI+ + +L EA E Y + G AP+T TYN+++ +C + +A ++
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 353 VDEMKQCGVGPNSRTYDIILQ 373
D M G P+ TY I++
Sbjct: 373 FDLMVSKGCEPDIVTYSILIN 393
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V + + F ++ GL P +N LV C+S + A+ELF +M RG+ P + +Y
Sbjct: 400 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 459
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
ILL+G L + E+ +M+ + Y I+I+ C A K D+A + + +K
Sbjct: 460 ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 519
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P ++ +I GL L EA + K K +G P+ TYN ++ A+ + +
Sbjct: 520 GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS 579
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
+++EMK CG +S T +++
Sbjct: 580 VELIEEMKVCGFSADSSTIKMVID 603
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV +A++ FE M + P DFN+L + ++K + M G+ D+ + T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
I++ + +++ LL V +EPD +T+ L+N +C + EAV M E
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P STLINGL R+ EAL ++ GF P+ TY V+ C S A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
+ +M++ + + Y I++
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVID 253
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 159/309 (51%), Gaps = 12/309 (3%)
Query: 70 PNSTIDAALAD---LSVEVSPELVAEVLNKLSNA---GVLALSFFHWAEKQKGFKHSTES 123
PN I LA LS +SPE V+EVL +L A G+ AL FF ++ K +++S
Sbjct: 47 PNHPIQPILAKHIPLS-SLSPEFVSEVLGRLFAAHSNGLKALEFFKYSLKSSKSSPTSDS 105
Query: 124 FHALIEALGKIRQFKVIWNLVEDMKQR--KLLTRDTXXXXXXXXXXXXKVKEAVETFEKM 181
F + L ++R F W L+ ++++ LL+ + +E +E F KM
Sbjct: 106 FEKTLHILARMRYFDQAWALMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKM 165
Query: 182 EK--YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
EK + K V +FN L+ C + +++A+ +F+K+ H PD+K+ ILL G+ +
Sbjct: 166 EKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFEKL-HSRFNPDVKTMNILLLGFKEAG 224
Query: 240 NLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
++ EM F+P+ VTYGI I+ +CK + + EA+ + +M + + I +
Sbjct: 225 DVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILT 284
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQC 359
TLI+G G + +A + +++ G P+ YNA++ + + A +V+ EM++
Sbjct: 285 TLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEK 344
Query: 360 GVGPNSRTY 368
G+ P+S T+
Sbjct: 345 GIEPDSVTF 353
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 102/256 (39%), Gaps = 2/256 (0%)
Query: 118 KHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVET 177
K + F+ L+ A R+ K ++ E + R T V
Sbjct: 173 KFGVDEFNILLRAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELF 232
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
+ +M K G KP + +D CK ++ +A LF+ M ++ T L+ G
Sbjct: 233 YHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGV 292
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+N ++ ++ E+ PD Y L+++ K A+ EM+EK + P
Sbjct: 293 ARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVT 352
Query: 298 FSTLINGLGSDKR--LDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDE 355
F ++ G+ K + E+Y+K K P+TPT ++ +C + ++ +
Sbjct: 353 FHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKY 412
Query: 356 MKQCGVGPNSRTYDII 371
M + G P+ +++
Sbjct: 413 MLEKGYCPHGHALELL 428
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 97/239 (40%), Gaps = 5/239 (2%)
Query: 102 VLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXX 160
V A F+ ++GFK ++ ++ I+ K R F L EDM + +T
Sbjct: 226 VTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTT 285
Query: 161 XXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRG 220
+A + F+++ K GL P+ +N L+ L K V A ++ +M +G
Sbjct: 286 LIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKG 345
Query: 221 LVPDLKSYTILLEGWSQQQNLLRVNEVC---REMKCECFEPDVVTYGILINAYCKAKKYD 277
+ PD ++ + G + + N VC ++MK P T +L+ +C + +
Sbjct: 346 IEPDSVTFHSMFIGMMKSKEF-GFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVN 404
Query: 278 EAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAV 336
+ + M EK P H L L + +R ++A E + G P Y +
Sbjct: 405 LGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSWQTVERGRCVSEPVYRML 463
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 137/281 (48%), Gaps = 15/281 (5%)
Query: 106 SFFHWAEKQKGFKHSTE--------SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD- 156
S+ W++ + E +F+ALI+A K +F L +DM +R + D
Sbjct: 307 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI---DP 363
Query: 157 ---TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELF 213
T ++ +A + FE M P+V +N L+ CKSK VE ELF
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 214 DKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKA 273
+M HRGLV D +YT L++G + +V ++M + PD++TY IL++ C
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 483
Query: 274 KKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTY 333
K ++A+ + MQ+ + +I++T+I G+ ++D+ + + G P TY
Sbjct: 484 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 543
Query: 334 NAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQP 374
N ++ C + +AY ++ +MK+ G PNS TY+ +++
Sbjct: 544 NTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 155/342 (45%), Gaps = 24/342 (7%)
Query: 40 PQNLSGSLRIHTLIPHTPHADKICKILSKSPNSTIDAALADLSVE--VSPELV--AEVLN 95
P ++ + IH L H ++ + AL D V+ P LV V+N
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAV--------------ALVDRMVQRGCQPNLVTYGVVVN 233
Query: 96 KLSNAGV--LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL 153
L G LAL+ + E K + F+ +I++L K R NL ++M+ + +
Sbjct: 234 GLCKRGDTDLALNLLNKMEAAK-IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 154 -TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQEL 212
T + +A + M + + P + FN L+D K +A++L
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 213 FDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKC-ECFEPDVVTYGILINAYC 271
+D M R + PD+ +Y L+ G+ L + ++ M +CF PDVVTY LI +C
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF-PDVVTYNTLIKGFC 411
Query: 272 KAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETP 331
K+K+ ++ + EM + ++ ++TLI GL D D A + +++ ++G P+
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471
Query: 332 TYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
TY+ ++ C + +++ A V D M++ + + Y +++
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 513
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 128/286 (44%), Gaps = 36/286 (12%)
Query: 120 STESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETF 178
S F+ L+ A+ K+++F V+ +L E M++ +++ T ++ A+
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 143
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW--- 235
KM K G +P + + L++ C K + A L D+M G PD ++T L+ G
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 236 ----------------SQQQNLLR----VNEVCR------------EMKCECFEPDVVTY 263
Q NL+ VN +C+ +M+ E DVV +
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIF 263
Query: 264 GILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKA 323
+I++ CK + D+A+ + EM+ K + P+ +S+LI+ L S R +A +
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 324 NGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYD 369
P T+NA++ A+ + +A ++ D+M + + P+ TY+
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN 369
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ +A+ F M K P + +FNKL+ + K K + L +KM+ +V L +Y
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL+ + ++ + + +M +EP +VT L+N YC K+ +AV +M E
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P F+TLI+GL + EA+ ++ G P TY VV C D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
++++M+ + + ++ I+
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIID 268
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV + + F + G+KP V +N ++ LC + +++A L KM+ G +P+ +Y
Sbjct: 520 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYN 579
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILIN 268
L+ + + E+ REM+ F D T G++ N
Sbjct: 580 TLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 618
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 139/312 (44%), Gaps = 53/312 (16%)
Query: 85 VSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLV 144
V+P +VAEVL KL N +A FFHWA KQKG+KH +++A L + F+ L
Sbjct: 123 VTPSIVAEVL-KLGNDAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLP 181
Query: 145 EDM---------KQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNK 195
E M KQ ++L R + +EKM+K+G KP V +N+
Sbjct: 182 ELMDSQGRPPSEKQFEILIR--------MHADNRRGLRVYYVYEKMKKFGFKPRVFLYNR 233
Query: 196 LVDV-----------------------------------LCKSKSVEKAQELFDKMRHRG 220
++D LCK+ +E+ E+ +MR
Sbjct: 234 IMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENL 293
Query: 221 LVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAV 280
PD+ +YT +++ + NL V EM+ + +PDV+ YG L+ CK + +
Sbjct: 294 CKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGY 353
Query: 281 GFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
+ EM+ K ++ I+ LI G +D ++ A +E +G+ + YNAV+
Sbjct: 354 ELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGL 413
Query: 341 CWSMRMDDAYRV 352
C ++D AY++
Sbjct: 414 CSVNQVDKAYKL 425
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 124/272 (45%), Gaps = 3/272 (1%)
Query: 92 EVLNKLSNAGVLALSFFHWAEKQK--GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQ 149
E+L ++ L ++ EK K GFK ++ +++AL K F + + ED K+
Sbjct: 197 EILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKE 256
Query: 150 RKLLTRDTXXXXXXXXX-XXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEK 208
L+ T +++E +E ++M + KP+V + ++ L +++
Sbjct: 257 DGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDA 316
Query: 209 AQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILIN 268
+ ++D+MR + PD+ +Y L+ G + + R E+ EMK + D Y +LI
Sbjct: 317 SLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIE 376
Query: 269 AYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAP 328
+ K A + ++ + + I++ +I GL S ++D+A + ++ P
Sbjct: 377 GFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEP 436
Query: 329 ETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
+ T + ++ AY R+ D V++ + + G
Sbjct: 437 DFETLSPIMVAYVVMNRLSDFSNVLERIGELG 468
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 133/273 (48%), Gaps = 7/273 (2%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD----TXX 159
AL+F Q GF +F+ L+ L K K +++ M Q D T
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY---DPDVYTYN 334
Query: 160 XXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHR 219
+VKEAVE ++M P +N L+ LCK VE+A EL + +
Sbjct: 335 SVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSK 394
Query: 220 GLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEA 279
G++PD+ ++ L++G +N E+ EM+ + EPD TY +LI++ C K DEA
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
Query: 280 VGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
+ +M+ S ++TLI+G + EA E +++ + +G + + TYN ++
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDG 514
Query: 340 YCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
C S R++DA +++D+M G P+ TY+ +L
Sbjct: 515 LCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 130/265 (49%), Gaps = 11/265 (4%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD------TXXXXXXXXXX 167
Q+G+ +++++I L K+ + K +++ M +TRD T
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM-----ITRDCSPNTVTYNTLISTLCK 377
Query: 168 XXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKS 227
+V+EA E + G+ P+V FN L+ LC +++ A ELF++MR +G PD +
Sbjct: 378 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT 437
Query: 228 YTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
Y +L++ + L + ++M+ V+TY LI+ +CKA K EA + EM+
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
+ + ++TLI+GL +R+++A + ++ G P+ TYN+++ +C +
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIK 557
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIIL 372
A +V M G P+ TY ++
Sbjct: 558 KAADIVQAMTSNGCEPDIVTYGTLI 582
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 117/234 (50%), Gaps = 8/234 (3%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMK----QRKLLTRDTXXXXXXXXXXX 168
+ KG + +++ LI++L + N+++ M+ R ++T +T
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKAN-- 484
Query: 169 XKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
K +EA E F++ME +G+ +N L+D LCKS+ VE A +L D+M G PD +Y
Sbjct: 485 -KTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
LL + + ++ + ++ + M EPD+VTYG LI+ CKA + + A +Q
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALE-FYEKFKANGFAPETPTYNAVVGAYC 341
K + +PH ++ +I GL ++ EA+ F E + N P+ +Y V C
Sbjct: 604 KGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLC 657
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 173/411 (42%), Gaps = 69/411 (16%)
Query: 15 SSNLPLSKPYPASLTPLSTSPTIKLPQNLSGSLRIHTLIPHTPHADKICKILSKSPNSTI 74
SS + + P+ A+L+ S +KL +L P A ++ + SK PN +
Sbjct: 33 SSTISFASPHSAALS----STDVKLLDSLRSQ-------PDDSAALRLFNLASKKPNFSP 81
Query: 75 DAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHS-----TESFHALIE 129
+ P L E+L +L +G SF + + K S T +F LIE
Sbjct: 82 E-----------PALYEEILLRLGRSG----SFDDMKKILEDMKSSRCEMGTSTFLILIE 126
Query: 130 ALGKIRQFKVIWNLVEDMKQRKLLTRDTX--XXXXXXXXXXXKVKEAVETFEKMEKYGLK 187
+ + I ++V+ M L DT +K + KM +G+K
Sbjct: 127 SYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIK 186
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL---LRV 244
P+VS FN L+ LC++ + A + + M GLVPD K++T +++G+ ++ +L LR+
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 245 NEVCREMKC---------------------------------ECFEPDVVTYGILINAYC 271
E E C + F PD T+ L+N C
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 272 KAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETP 331
KA A+ M ++ P + ++++I+GL + EA+E ++ +P T
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV 366
Query: 332 TYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQPDKGSKNPR 382
TYN ++ C ++++A + + G+ P+ T++ ++Q ++N R
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 178/386 (46%), Gaps = 27/386 (6%)
Query: 3 FSRSPKRFFNLFSS-NLPLSKPYPASLTPLSTSPTIKLPQNLSGSL---------RIHTL 52
S +R F+ FS NL + + L + I L +++ S R+ +
Sbjct: 38 LSFCCERGFSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSA 97
Query: 53 IPHTPHADKICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAE 112
I T D + + + I L LS+ ++N L L+F +
Sbjct: 98 IAKTKQYDLVLALCKQMELKGIAHNLYTLSI---------MINCFCRCRKLCLAFSAMGK 148
Query: 113 KQK-GFKHSTESFHALIEAL---GKIRQ-FKVIWNLVEDMKQRKLLTRDTXXXXXXXXXX 167
K G++ +T +F LI L G++ + +++ +VE + L+T +T
Sbjct: 149 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSG- 207
Query: 168 XXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKS 227
K EA+ +KM +YG +P + +++V+CKS A EL KM R + D
Sbjct: 208 --KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 228 YTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
Y+I+++G + +L + EM+ + +++TY ILI +C A ++D+ +M
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
++ + P+ FS LI+ + +L EA E +++ G AP+T TY +++ +C +D
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILQ 373
A ++VD M G PN RT++I++
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILIN 411
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 138/282 (48%), Gaps = 2/282 (0%)
Query: 93 VLNKLSNAGVLALSFFHWAEKQ-KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRK 151
+++ L G L +F + E + KG + +++ LI ++ L+ DM +RK
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 152 LL-TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQ 210
+ T K++EA E ++M G+ P+ + L+D CK ++KA
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 211 ELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAY 270
++ D M +G P+++++ IL+ G+ + + E+ R+M D VTY LI +
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Query: 271 CKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPET 330
C+ K + A + EM + + P+ + L++GL + ++ALE +EK + + +
Sbjct: 449 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDI 508
Query: 331 PTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
YN ++ C + ++DDA+ + + GV P +TY+I++
Sbjct: 509 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 108/200 (54%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+E KME+ +K + ++ ++D LCK S++ A LF++M +G+ ++ +Y IL+
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+ ++ R+M P+VVT+ +LI+++ K K EA + EM + + P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+++LI+G + LD+A + + + G P T+N ++ YC + R+DD +
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 354 DEMKQCGVGPNSRTYDIILQ 373
+M GV ++ TY+ ++Q
Sbjct: 427 RKMSLRGVVADTVTYNTLIQ 446
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 110/211 (52%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ +A + + M G P + FN L++ CK+ ++ ELF KM RG+V D +Y
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++G+ + L E+ +EM P++VTY IL++ C + ++A+ + ++++
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
M I++ +I+G+ + ++D+A + + G P TYN ++G C + +A
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Query: 351 RVVDEMKQCGVGPNSRTYDIILQPDKGSKNP 381
+ +M++ G P+ TY+I+++ G +
Sbjct: 564 LLFRKMEEDGHAPDGWTYNILIRAHLGDGDA 594
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 107/216 (49%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ + +E F KM G+ + +N L+ C+ + A+ELF +M R + P++ +Y
Sbjct: 418 RIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYK 477
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
ILL+G + E+ +++ E D+ Y I+I+ C A K D+A + + K
Sbjct: 478 ILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 537
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P ++ +I GL L EA + K + +G AP+ TYN ++ A+ +
Sbjct: 538 GVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKS 597
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQPDKGSKNPRSLL 385
++++E+K+CG ++ T +++ + +S L
Sbjct: 598 VKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFL 633
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 138/286 (48%), Gaps = 18/286 (6%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRK----LLTRDTXX 159
AL FF W E GF H+ + + L K FK +W+ + + +R+ ++T +
Sbjct: 110 ALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASIT 169
Query: 160 XXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHR 219
VKEA+ TF +M++Y KP+V +N +++ LC+ + +KA+ L D+M+
Sbjct: 170 CLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLP 229
Query: 220 GLV--PDLKSYTILLEGWSQ-----------QQNLLRVNEVCREMKCECFEPDVVTYGIL 266
G PD +YTIL+ + + ++ + N + REM F PDVVTY L
Sbjct: 230 GFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCL 289
Query: 267 INAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGF 326
I+ CK + A+ + +M+ K +P+ +++ I ++ A+E K G
Sbjct: 290 IDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGH 349
Query: 327 A-PETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDII 371
P + TY ++ A + R +A +V EM + G+ P TY ++
Sbjct: 350 GVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLV 395
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 4/150 (2%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ EA F +M G P+V +N L+D CK+ + +A ELF+ M+ +G VP+ +Y
Sbjct: 263 RMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYN 322
Query: 230 ILLEGWSQQQNLLRVNEVCREM-KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
+ +S + E+ R M K P TY LI+A + ++ EA EM E
Sbjct: 323 SFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVE 382
Query: 289 KNMMPSPHIFSTLINGLGSD---KRLDEAL 315
++P + + + + L S+ LDE L
Sbjct: 383 AGLVPREYTYKLVCDALSSEGLASTLDEEL 412
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 130/256 (50%), Gaps = 7/256 (2%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD----TXXXXXXXXXXXXKVKEAVETF 178
+F+ALI+A K +F L +DM +R + D T ++ +A + F
Sbjct: 257 TFNALIDAFVKEGKFVEAEKLHDDMIKRSI---DPDIFTYNSLINGFCMHDRLDKAKQMF 313
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
E M P++ +N L+ CKSK VE ELF +M HRGLV D +YT L++G
Sbjct: 314 EFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 373
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
+ +V ++M + PD++TY IL++ C K ++A+ + MQ+ + +I+
Sbjct: 374 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 433
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
+T+I G+ ++D+ + + G P TYN ++ C + +AY ++ +MK+
Sbjct: 434 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 493
Query: 359 CGVGPNSRTYDIILQP 374
G P+S TY+ +++
Sbjct: 494 DGPLPDSGTYNTLIRA 509
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 122/253 (48%), Gaps = 3/253 (1%)
Query: 124 FHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXKVKEAVETFEKM 181
F+ L+ A+ K+++F ++ +L E M QR ++ + T ++ A+ KM
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKM-QRLGISHNLYTYNILINCFCRRSQISLALALLGKM 71
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
K G +P + + L++ C K + A L D+M G PD ++T L+ G
Sbjct: 72 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 131
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
+ M +P++VTYG+++N CK D A ++M+ + IF+T+
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
I+ L + +D+AL +++ + G P TY++++ C R DA +++ +M + +
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 362 GPNSRTYDIILQP 374
PN T++ ++
Sbjct: 252 NPNLVTFNALIDA 264
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 126/261 (48%), Gaps = 1/261 (0%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVK 172
+ G++ T +F LI L + LV+ M QR T +
Sbjct: 108 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 167
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
A KME ++ +V FN ++D LCK + V+ A LF +M +G+ P++ +Y+ L+
Sbjct: 168 LAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+++ +M + P++VT+ LI+A+ K K+ EA + +M ++++
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 287
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P +++LING RLD+A + +E + P+ TYN ++ +C S R++D +
Sbjct: 288 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347
Query: 353 VDEMKQCGVGPNSRTYDIILQ 373
EM G+ ++ TY ++Q
Sbjct: 348 FREMSHRGLVGDTVTYTTLIQ 368
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 120/261 (45%), Gaps = 1/261 (0%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXK-VK 172
Q+G + + ++ ++ L K + +NL+ M+ K+ + V
Sbjct: 143 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 202
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+A+ F++ME G++P V ++ L+ LC A +L M + + P+L ++ L+
Sbjct: 203 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 262
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ + ++ + ++ +M +PD+ TY LIN +C + D+A + M K+
Sbjct: 263 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 322
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P ++TLI G KR+++ E + + G +T TY ++ D+A +V
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382
Query: 353 VDEMKQCGVGPNSRTYDIILQ 373
+M GV P+ TY I+L
Sbjct: 383 FKQMVSDGVPPDIMTYSILLD 403
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 154/342 (45%), Gaps = 24/342 (7%)
Query: 40 PQNLSGSLRIHTLIPHTPHADKICKILSKSPNSTIDAALADLSVE--VSPELV--AEVLN 95
P ++ + IH L H ++ + AL D V+ P LV V+N
Sbjct: 113 PDTITFTTLIHGLFLHNKASEAV--------------ALVDRMVQRGCQPNLVTYGVVVN 158
Query: 96 KLSNAGVLALSFFHWAEKQKGFKHSTES--FHALIEALGKIRQFKVIWNLVEDMKQRKLL 153
L G + L+F + K + K + F+ +I++L K R NL ++M+ + +
Sbjct: 159 GLCKRGDIDLAF-NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 217
Query: 154 -TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQEL 212
T + +A + M + + P + FN L+D K +A++L
Sbjct: 218 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 277
Query: 213 FDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKC-ECFEPDVVTYGILINAYC 271
D M R + PD+ +Y L+ G+ L + ++ M +CF PD+ TY LI +C
Sbjct: 278 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF-PDLDTYNTLIKGFC 336
Query: 272 KAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETP 331
K+K+ ++ + EM + ++ ++TLI GL D D A + +++ ++G P+
Sbjct: 337 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 396
Query: 332 TYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
TY+ ++ C + +++ A V D M++ + + Y +++
Sbjct: 397 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 438
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 104/204 (50%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ +AV ++M + G +P+ F L+ L +A L D+M RG P+L +Y
Sbjct: 95 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 154
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+++ G ++ ++ + +M+ E DVV + +I++ CK + D+A+ + EM+ K
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ +S+LI+ L S R +A + P T+NA++ A+ + +A
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
++ D+M + + P+ TY+ ++
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLIN 298
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 90/186 (48%)
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEV 247
P + +FNKL+ + K K + L +KM+ G+ +L +Y IL+ + ++ + +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 248 CREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGS 307
+M +EP +VT L+N YC K+ +AV +M E P F+TLI+GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 308 DKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
+ EA+ ++ G P TY VV C +D A+ ++++M+ + +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 368 YDIILQ 373
++ I+
Sbjct: 188 FNTIID 193
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV + + F + G+KP V +N ++ LC + +++A L KM+ G +PD +Y
Sbjct: 445 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYN 504
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILIN 268
L+ + + E+ REM+ F D T G++ N
Sbjct: 505 TLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 543
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 151/314 (48%), Gaps = 9/314 (2%)
Query: 55 HTPHADKICKIL-SKSPNSTIDAALADLSVEVSPELVAEVLN---KLSNAGVLALSFFHW 110
H D IC+++ +++ + + ++ DL E LV VL+ KL +A L FF W
Sbjct: 84 HEKLEDTICRMMDNRAWTTRLQNSIRDLVPEWDHSLVYNVLHGAKKLEHA----LQFFRW 139
Query: 111 AEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXX 169
E+ +H ++ +I+ LG++ + ++ DM ++ + D
Sbjct: 140 TERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAG 199
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
V+E+V+ F+KM+ G++ + +N L V+ + A+ F+KM G+ P +Y
Sbjct: 200 IVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYN 259
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++L G+ L +MK PD T+ +IN +C+ KK DEA + EM+
Sbjct: 260 LMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGN 319
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ PS ++T+I G + R+D+ L +E+ +++G P TY+ ++ C + +M +A
Sbjct: 320 KIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEA 379
Query: 350 YRVVDEMKQCGVGP 363
++ M + P
Sbjct: 380 KNILKNMMAKHIAP 393
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 105/205 (51%), Gaps = 1/205 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFN-KLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
K++ A++ F E+ GL D + K++ +L + + A+ + M +G+ D +
Sbjct: 129 KLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMF 188
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
+L+E + + + ++ ++MK E + +Y L + +Y A ++++M
Sbjct: 189 VVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVS 248
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
+ + P+ H ++ ++ G RL+ AL F+E K G +P+ T+N ++ +C +MD+
Sbjct: 249 EGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDE 308
Query: 349 AYRVVDEMKQCGVGPNSRTYDIILQ 373
A ++ EMK +GP+ +Y +++
Sbjct: 309 AEKLFVEMKGNKIGPSVVSYTTMIK 333
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 117/280 (41%), Gaps = 12/280 (4%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXX 162
AL FF K +G +F+ +I + ++ L +MK K+ + +
Sbjct: 274 ALRFFE-DMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMI 332
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
+V + + FE+M G++P + ++ L+ LC + + +A+ + M + +
Sbjct: 333 KGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIA 392
Query: 223 P-DLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVG 281
P D + LL S+ ++ EV + M + YG+LI CKA Y+ A+
Sbjct: 393 PKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIK 452
Query: 282 FYHEMQEKNMM--------PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTY 333
+ EK ++ P ++ +I L ++ + +A + + G +
Sbjct: 453 LLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALN 512
Query: 334 NAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
N + G + D +Y ++ M + GV S Y+++++
Sbjct: 513 NLIRG-HAKEGNPDSSYEILKIMSRRGVPRESNAYELLIK 551
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 113/204 (55%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+++EA+ +M + G+KP+V + ++D LCK+ V A LFD+M + G+ PD+ YT
Sbjct: 157 RMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYT 216
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G + + R M +PDV+T+ LI+A+ K K+ +A Y+EM
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++ P+ +++LING + +DEA + + + G P+ Y +++ +C ++DDA
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDA 336
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
++ EM Q G+ N+ TY ++Q
Sbjct: 337 MKIFYEMSQKGLTGNTITYTTLIQ 360
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 109/205 (53%), Gaps = 3/205 (1%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
++A M K +KP+V FN L+D K A+EL+++M + P++ +YT L
Sbjct: 229 RDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSL 288
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+ G+ + + ++ M+ + PDVV Y LIN +CK KK D+A+ ++EM +K +
Sbjct: 289 INGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
+ ++TLI G G + + A E + + G P TYN ++ C++ ++ A
Sbjct: 349 TGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALM 408
Query: 352 VVDEMKQC---GVGPNSRTYDIILQ 373
+ ++M++ GV PN TY+++L
Sbjct: 409 IFEDMQKREMDGVAPNIWTYNVLLH 433
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V A+ F++ME YG++P+V + LV+ LC S A L M R + PD+ ++
Sbjct: 193 VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNA 252
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++ + ++ L E+ EM P++ TY LIN +C DEA ++ M+ K
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG 312
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P +++LING K++D+A++ + + G T TY ++ + + + A
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQ 372
Query: 351 RVVDEMKQCGVGPNSRTYDIILQ 373
V M GV PN RTY+++L
Sbjct: 373 EVFSHMVSRGVPPNIRTYNVLLH 395
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 103/203 (50%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ EA++ F M + P + DF KL++V+ K K + L D ++ G+ DL +
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L+ + Q + +M FEPD+VT+ LIN +C + +EA+ ++M E
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P +++T+I+ L + ++ AL +++ + G P+ Y ++V C S R DA
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
++ M + + P+ T++ ++
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALI 254
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 152/333 (45%), Gaps = 19/333 (5%)
Query: 52 LIPHTPHADKICKILSKSPNSTIDAALADL----SVEVSPELV--AEVLNKLSNAGVL-- 103
++ +T D +CK N ++ AL+ + + P++V ++N L N+G
Sbjct: 177 VVMYTTIIDSLCK------NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXX 162
A S K+K K +F+ALI+A K +F L +M + + T
Sbjct: 231 ADSLLRGMTKRK-IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
V EA + F ME G P+V + L++ CK K V+ A ++F +M +GL
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
+ +YT L++G+ Q EV M P++ TY +L++ C K +A+
Sbjct: 350 GNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMI 409
Query: 283 YHEMQEKNM---MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
+ +MQ++ M P+ ++ L++GL + +L++AL +E + TY ++
Sbjct: 410 FEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQG 469
Query: 340 YCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
C + ++ +A + + GV PN TY ++
Sbjct: 470 MCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 5/228 (2%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXX 162
A F+ E KG ++ +LI K ++ + +M Q+ L T
Sbjct: 301 ARQMFYLME-TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHR--- 219
K A E F M G+ P + +N L+ LC + V+KA +F+ M+ R
Sbjct: 360 QGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMD 419
Query: 220 GLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEA 279
G+ P++ +Y +LL G L + V +M+ + ++TY I+I CKA K A
Sbjct: 420 GVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNA 479
Query: 280 VGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFA 327
V + + K + P+ ++T+I+GL + EA + K K +G +
Sbjct: 480 VNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 76/166 (45%)
Query: 203 SKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVT 262
S +A +LF M +P + +T LL ++ + V +C ++ D+ T
Sbjct: 50 SLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYT 109
Query: 263 YGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFK 322
+L+N +C++ + A F +M + P F++LING R++EA+ +
Sbjct: 110 CNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169
Query: 323 ANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
G P+ Y ++ + C + ++ A + D+M+ G+ P+ Y
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMY 215
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 142/317 (44%), Gaps = 51/317 (16%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR-----KLLTRDTX 158
L FF W KGF H +SF ++E LG+ R V N + +++R KL R
Sbjct: 84 GLRFFDWVS-NKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDR-YF 141
Query: 159 XXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRH 218
+E+V+ F+ M++ G+ P V FN L+ +L K A +LFD+MR
Sbjct: 142 NSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRR 201
Query: 219 R-GLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKY- 276
G+ PD ++ L+ G+ + + + ++M+ PDVVTY +I+ C+A K
Sbjct: 202 TYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVK 261
Query: 277 ------------------------------------DEAVGFYHEMQEKNMMPSPHIFST 300
DEAV +H+M + + P+ ++T
Sbjct: 262 IAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNT 321
Query: 301 LINGLGSDKRLDEALEFY----EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM 356
LI GL R DE + + F FAP+ T+N ++ A+C + +D A +V EM
Sbjct: 322 LIKGLSEAHRYDEIKDILIGGNDAFTT--FAPDACTFNILIKAHCDAGHLDAAMKVFQEM 379
Query: 357 KQCGVGPNSRTYDIILQ 373
+ P+S +Y ++++
Sbjct: 380 LNMKLHPDSASYSVLIR 396
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 126/328 (38%), Gaps = 49/328 (14%)
Query: 83 VEVSPELVAEVLNKLSNAGVLALSF-FHWAEKQKGFKHSTESFHALIEALGKIRQFKVIW 141
V++ ++ NAG+ S KQ G S +F++L+ L K + +
Sbjct: 134 VKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAH 193
Query: 142 NLVEDMKQRKLLTRD--TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDV 199
+L ++M++ +T D T V EA F+ ME Y P+V +N ++D
Sbjct: 194 DLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDG 253
Query: 200 LCKS-------------------------------------KSVEKAQELFDKMRHRGLV 222
LC++ + +++A +F M RGL
Sbjct: 254 LCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLK 313
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVC--REMKCECFEPDVVTYGILINAYCKAKKYDEAV 280
P+ +Y L++G S+ + ++ F PD T+ ILI A+C A D A+
Sbjct: 314 PNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAM 373
Query: 281 GFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEAL----EFYEK---FKANGFAPETPTY 333
+ EM + P +S LI L D A E +EK + P Y
Sbjct: 374 KVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAY 433
Query: 334 NAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
N + C + + A +V ++ + GV
Sbjct: 434 NPMFEYLCANGKTKQAEKVFRQLMKRGV 461
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 84/184 (45%), Gaps = 4/184 (2%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K K+A + F ++ K G++ S + L+ C+ + A EL M R VPDL++Y
Sbjct: 445 KTKQAEKVFRQLMKRGVQDPPS-YKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYE 503
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L++G + L ++ + M + P T+ ++ K K +E+ M EK
Sbjct: 504 LLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEK 563
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ + + + ++ L S + ++A NG+ + ++G C + ++ DA
Sbjct: 564 RIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKM---EELLGYLCENRKLLDA 620
Query: 350 YRVV 353
+ +V
Sbjct: 621 HTLV 624
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 160/346 (46%), Gaps = 38/346 (10%)
Query: 61 KICKILSKSPN-STIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKH 119
+IC++LS S + AL +V+ +PELV EVL G L FF W K+ G+KH
Sbjct: 617 EICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKH 676
Query: 120 STESFHALIEALGKIRQFKVIWNLVEDMKQRK-LLTRDTXXXXXXXXXXXXKVKEAVETF 178
++E+++ I+ G + FK + +L +M+++ L+T+DT A+ TF
Sbjct: 677 NSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTF 736
Query: 179 EKMEKYGLKPEVSDFNKLVDVLC--KSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWS 236
++M+ GL P S F L+ VLC K ++VE+A F +M G VPD + L
Sbjct: 737 KEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLC 796
Query: 237 QQQNL----------------------LRVNEVCREMKCE-------CFEP-----DVVT 262
+ N + + +CR K E FE D T
Sbjct: 797 EVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYT 856
Query: 263 YGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFK 322
YG +++ + +A+ + M+E P H++++LI +K+L++ LE +K +
Sbjct: 857 YGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKME 916
Query: 323 ANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
P TY A++ Y ++++A+ M++ G P+ +TY
Sbjct: 917 GESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTY 962
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 147/308 (47%), Gaps = 14/308 (4%)
Query: 73 TIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALG 132
+++ L LS PE+V VL + LA+ FF+W +++ GF H ++ ++ G
Sbjct: 141 SMEDRLEKLSFRFEPEIVENVLKRCFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAG 200
Query: 133 KIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEV 190
+ R ++ LV +M ++ +D T K+ + + FEKM K G + +
Sbjct: 201 EARNLDMVDELVSEM-EKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDA 259
Query: 191 SDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCRE 250
+ +N ++ LC + + A E + +M +G+ L++Y +LL+ ++ + + V + +
Sbjct: 260 TAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADD 319
Query: 251 MK--CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSD 308
M CE E D +G L+ ++C + K EA+ E++ K M F L+ GL
Sbjct: 320 MVRICEISEHD--AFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRA 377
Query: 309 KRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDE---MKQCGVGPNS 365
R+ +ALE + K ++ Y ++ Y +R +D + +++ +K+ G P
Sbjct: 378 NRMVDALEIVDIMKRRKL-DDSNVYGIIISGY---LRQNDVSKALEQFEVIKKSGRPPRV 433
Query: 366 RTYDIILQ 373
TY I+Q
Sbjct: 434 STYTEIMQ 441
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 88/182 (48%)
Query: 124 FHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEK 183
F L++ L + + +V+ MK+RKL + V +A+E FE ++K
Sbjct: 367 FEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKK 426
Query: 184 YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLR 243
G P VS + +++ L K K EK LF++M G+ PD + T ++ G Q +
Sbjct: 427 SGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAE 486
Query: 244 VNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLIN 303
+V M+ + +P +Y I + C++ +YDE + +++M ++ IFS +I+
Sbjct: 487 AWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVIS 546
Query: 304 GL 305
+
Sbjct: 547 SM 548
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 71/144 (49%)
Query: 193 FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK 252
+ +V L + ++KA + + M+ G P + YT L+ + +++ L +V E C++M+
Sbjct: 857 YGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKME 916
Query: 253 CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD 312
E EP VVTY +I Y K +EA + M+E+ P +S IN L + +
Sbjct: 917 GESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSE 976
Query: 313 EALEFYEKFKANGFAPETPTYNAV 336
+AL+ + G AP T + V
Sbjct: 977 DALKLLSEMLDKGIAPSTINFRTV 1000
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/277 (19%), Positives = 119/277 (42%), Gaps = 36/277 (12%)
Query: 97 LSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD 156
++ G LAL F+ +KG ++ L++ + K + V+ ++ +DM
Sbjct: 271 IAGRGDLALEFYK-EMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDM--------- 320
Query: 157 TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM 216
++ E E F L+ C S +++A EL ++
Sbjct: 321 ------------VRICEI-------------SEHDAFGYLLKSFCVSGKIKEALELIREL 355
Query: 217 RHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKY 276
+++ + D K + IL++G + ++ E+ MK + D YGI+I+ Y +
Sbjct: 356 KNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD-DSNVYGIIISGYLRQNDV 414
Query: 277 DEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAV 336
+A+ + +++ P ++ ++ L K+ ++ + + NG P++ AV
Sbjct: 415 SKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAV 474
Query: 337 VGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
V + R+ +A++V M++ G+ P ++Y I ++
Sbjct: 475 VAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVK 511
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 1/195 (0%)
Query: 121 TESFHALIEALGKIRQFK-VIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFE 179
T ++ I AL +I + + + L +R LL + T +++A++
Sbjct: 819 TVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVN 878
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
M++ G KP V + L+ K K +EK E KM P + +YT ++ G+
Sbjct: 879 SMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLG 938
Query: 240 NLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
+ R M+ PD TY IN C+A K ++A+ EM +K + PS F
Sbjct: 939 KVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFR 998
Query: 300 TLINGLGSDKRLDEA 314
T+ GL + + D A
Sbjct: 999 TVFYGLNREGKHDLA 1013
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 143/289 (49%), Gaps = 3/289 (1%)
Query: 86 SPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVE 145
SP V +++ S+ +LA F +A +Q F+HS S LI LG+ R F +I +++
Sbjct: 50 SPTRVQKLIASQSDP-LLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLA 108
Query: 146 DMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSK 204
+ LT + ++ + TF KM ++ P+ N+++DVL +
Sbjct: 109 KHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHR 168
Query: 205 S-VEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTY 263
++KA ELF R G++P+ +SY +L++ + +L ++ +M PDV +Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 264 GILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKA 323
ILI +C+ + + A+ +M K +P ++TL+N L +L EA + + K
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288
Query: 324 NGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
G P+ YN ++ +C R DA +V+D+M G PNS +Y ++
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLI 337
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A + F KM + + P+V + L+ C+ V A EL D M ++G VPD SYT LL
Sbjct: 209 AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLN 268
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
++ L ++ MK + PD+V Y +I +C+ + +A +M P
Sbjct: 269 SLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSP 328
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ + TLI GL DE ++ E+ + GF+P N +V +C ++++A VV
Sbjct: 329 NSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVV 388
Query: 354 DEMKQCGVGPNSRTYDIIL 372
+ + + G +S T+++++
Sbjct: 389 EVVMKNGETLHSDTWEMVI 407
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 114/258 (44%), Gaps = 3/258 (1%)
Query: 87 PELVAEVLNKL-SNAGVLALSF-FHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLV 144
P+ + +L+ L S+ G L +F + + G +T S++ L++A + + L
Sbjct: 154 PKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLF 213
Query: 145 EDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKS 203
M +R ++ D+ +V A+E + M G P+ + L++ LC+
Sbjct: 214 GKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRK 273
Query: 204 KSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTY 263
+ +A +L +M+ +G PDL Y ++ G+ ++ + +V +M P+ V+Y
Sbjct: 274 TQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSY 333
Query: 264 GILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKA 323
LI C +DE + EM K P + + L+ G S +++EA + E
Sbjct: 334 RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMK 393
Query: 324 NGFAPETPTYNAVVGAYC 341
NG + T+ V+ C
Sbjct: 394 NGETLHSDTWEMVIPLIC 411
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 86/170 (50%), Gaps = 8/170 (4%)
Query: 209 AQELFDKMRHRGLVPDLK----SYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYG 264
A+E+FD + P+ + S+ IL+ + + +++V + + + +
Sbjct: 67 AKEIFDYASQQ---PNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFT 123
Query: 265 ILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDK-RLDEALEFYEKFKA 323
LI Y +AK ++ + +++M E N P P + +++ L S + L +A E ++ +
Sbjct: 124 YLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRL 183
Query: 324 NGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+G P T +YN ++ A+C + + AY++ +M + V P+ +Y I++Q
Sbjct: 184 HGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQ 233
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 130/264 (49%), Gaps = 7/264 (2%)
Query: 113 KQKGFKHSTESFHALIEAL---GKIR-QFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXX 168
+ K F T +++ +I +L GK+ KV+ L+ D Q ++T
Sbjct: 185 RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVIT---YTILIEATMLE 241
Query: 169 XKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
V EA++ ++M GLKP++ +N ++ +CK V++A E+ + +G PD+ SY
Sbjct: 242 GGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISY 301
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
ILL Q ++ +M E +P+VVTY ILI C+ K +EA+ M+E
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE 361
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
K + P + + LI + RLD A+EF E ++G P+ YN V+ C + + D
Sbjct: 362 KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQ 421
Query: 349 AYRVVDEMKQCGVGPNSRTYDIIL 372
A + ++ + G PNS +Y+ +
Sbjct: 422 ALEIFGKLGEVGCSPNSSSYNTMF 445
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 99/203 (48%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K +E + KM P V ++ L+ LC+ +E+A L M+ +GL PD SY
Sbjct: 313 KWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYD 372
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ + ++ L E M + PD+V Y ++ CK K D+A+ + ++ E
Sbjct: 373 PLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEV 432
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P+ ++T+ + L S AL + +NG P+ TYN+++ C +D+A
Sbjct: 433 GCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEA 492
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
+ ++ +M+ C P+ TY+I+L
Sbjct: 493 FELLVDMRSCEFHPSVVTYNIVL 515
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 100/202 (49%), Gaps = 1/202 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ +AV E +EK+G +P+V +N L++ CK ++ A + D+MR + PD +Y I
Sbjct: 140 IPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNI 198
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++ + L +V ++ + +P V+TY ILI A DEA+ EM +
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ P ++T+I G+ + +D A E + G P+ +YN ++ A + ++
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGE 318
Query: 351 RVVDEMKQCGVGPNSRTYDIIL 372
+++ +M PN TY I++
Sbjct: 319 KLMTKMFSEKCDPNVVTYSILI 340
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 99/201 (49%), Gaps = 1/201 (0%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
E++ E M + G P+V KL+ +++ KA + + + G PD+ +Y L+
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALI 165
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G+ + + V M+ + F PD VTY I+I + C K D A+ +++ N
Sbjct: 166 NGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQ 225
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ ++ LI + +DEAL+ ++ + G P+ TYN ++ C +D A+ +
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285
Query: 353 VDEMKQCGVGPNSRTYDIILQ 373
V ++ G P+ +Y+I+L+
Sbjct: 286 VRNLELKGCEPDVISYNILLR 306
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 90/176 (51%), Gaps = 7/176 (3%)
Query: 201 CKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL---LRVNEVCREMKCECFE 257
C+S + ++ L + M +G PD+ T L++G+ +N+ +RV E+ + +
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG----Q 155
Query: 258 PDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEF 317
PDV Y LIN +CK + D+A M+ K+ P ++ +I L S +LD AL+
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 318 YEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+ ++ P TY ++ A +D+A +++DEM G+ P+ TY+ I++
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIR 271
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 97/217 (44%), Gaps = 3/217 (1%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXX--XXXXXXXXXKVKEAVETFEK 180
++ LI L + + + NL++ MK+ K LT D ++ A+E E
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKE-KGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
M G P++ ++N ++ LCK+ ++A E+F K+ G P+ SY + +
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 453
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
+R + EM +PD +TY +I+ C+ DEA +M+ PS ++
Sbjct: 454 KIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNI 513
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVV 337
++ G R+++A+ E NG P TY ++
Sbjct: 514 VLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 3/207 (1%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXX-XXXKV 171
K+KG S+ LI A + + V +E M L K
Sbjct: 360 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+A+E F K+ + G P S +N + L S +A + +M G+ PD +Y +
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSM 479
Query: 232 LEGWSQQQNLLRVNEVCREMK-CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+ ++ + E+ +M+ CE F P VVTY I++ +CKA + ++A+ M
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCE-FHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEF 317
P+ ++ LI G+G EA+E
Sbjct: 539 CRPNETTYTVLIEGIGFAGYRAEAMEL 565
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 116/210 (55%), Gaps = 12/210 (5%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V +AV +KM + G KP++ +N ++D LCK+K V A + F ++ +G+ P++ +YT
Sbjct: 170 RVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYT 229
Query: 230 ILLEG------WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFY 283
L+ G WS LL +M + P+V+TY L++A+ K K EA +
Sbjct: 230 ALVNGLCNSSRWSDAARLL------SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELF 283
Query: 284 HEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWS 343
EM ++ P +S+LINGL R+DEA + ++ + G + +YN ++ +C +
Sbjct: 284 EEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKA 343
Query: 344 MRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
R++D ++ EM Q G+ N+ TY+ ++Q
Sbjct: 344 KRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 373
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 104/203 (51%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V +A + F+++E+ G++P V + LV+ LC S A L M + + P++ +Y+
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
LL+ + + +L E+ EM +PD+VTY LIN C + DEA + M K
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ ++TLING KR+++ ++ + + G T TYN ++ + + +D A
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
+M G+ P+ TY+I+L
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILL 407
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 133/259 (51%), Gaps = 1/259 (0%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEA 174
G+K +++A+I++L K ++ ++ ++++++ + T + +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
M K + P V ++ L+D K+ V +A+ELF++M + PD+ +Y+ L+ G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
+ N++ M + DVV+Y LIN +CKAK+ ++ + + EM ++ ++ +
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 295 PHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD 354
++TLI G +D+A EF+ + G +P+ TYN ++G C + ++ A + +
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Query: 355 EMKQCGVGPNSRTYDIILQ 373
+M++ + + TY +++
Sbjct: 425 DMQKREMDLDIVTYTTVIR 443
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 150/310 (48%), Gaps = 9/310 (2%)
Query: 71 NSTIDA-ALADLSVEVS--PELVA--EVLNKLSNAGVL--ALSFFHWAEKQKGFKHSTES 123
N DA +L D VE+ P++VA +++ L + A FF E+ KG + + +
Sbjct: 169 NRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIER-KGIRPNVVT 227
Query: 124 FHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKME 182
+ AL+ L ++ L+ DM ++K+ T KV EA E FE+M
Sbjct: 228 YTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287
Query: 183 KYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLL 242
+ + P++ ++ L++ LC +++A ++FD M +G + D+ SY L+ G+ + + +
Sbjct: 288 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347
Query: 243 RVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLI 302
++ REM + VTY LI + +A D+A F+ +M + P ++ L+
Sbjct: 348 DGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Query: 303 NGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVG 362
GL + L++AL +E + + TY V+ C + ++++A+ + + G+
Sbjct: 408 GGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLK 467
Query: 363 PNSRTYDIIL 372
P+ TY ++
Sbjct: 468 PDIVTYTTMM 477
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 103/209 (49%), Gaps = 3/209 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ EA + F+ M G +V +N L++ CK+K VE +LF +M RGLV + +Y
Sbjct: 310 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 369
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L++G+ Q ++ + E +M PD+ TY IL+ C + ++A+ + +MQ++
Sbjct: 370 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 429
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
M ++T+I G+ +++EA + G P+ TY ++ C + +
Sbjct: 430 EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEV 489
Query: 350 YRVVDEMKQCGVGPNSRTY---DIILQPD 375
+ +MKQ G+ N T DI L +
Sbjct: 490 EALYTKMKQEGLMKNDCTLSDGDITLSAE 518
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 132/261 (50%), Gaps = 4/261 (1%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEA 174
G+K S S L+ AL K + + + ++M +RK+ T K+ +A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCK---SKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+ E M+ YG P V +N L+D CK + + KA + +M + P+L ++ IL
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++G+ + NL +V +EM + +P+V++Y LIN C K EA+ +M +
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P+ ++ LING + L EAL+ + K G P T YN ++ AYC ++DD +
Sbjct: 363 QPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFA 422
Query: 352 VVDEMKQCGVGPNSRTYDIIL 372
+ +EM++ G+ P+ TY+ ++
Sbjct: 423 LKEEMEREGIVPDVGTYNCLI 443
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 104/200 (52%), Gaps = 1/200 (0%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
+++ F++M +KP V +N L++ LC + +A + DKM G+ P+L +Y L+
Sbjct: 315 SMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALIN 374
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+ + L ++ +K + P Y +LI+AYCK K D+ EM+ + ++P
Sbjct: 375 GFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVP 434
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
++ LI GL + ++ A + +++ + G P+ T++ ++ YC A ++
Sbjct: 435 DVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLL 493
Query: 354 DEMKQCGVGPNSRTYDIILQ 373
EM + G+ P TY+I+++
Sbjct: 494 KEMSKMGLKPRHLTYNIVMK 513
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 99/202 (49%), Gaps = 2/202 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+KEA++ F ++ G P +N L+D CK ++ L ++M G+VPD+ +Y
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ G + N+ ++ ++ + PD+VT+ IL+ YC+ + +A EM +
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG 500
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKF-KANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P ++ ++ G + L A + K +YN ++ Y +++DA
Sbjct: 501 LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDA 560
Query: 350 YRVVDEMKQCGVGPNSRTYDII 371
+++EM + G+ PN TY+I+
Sbjct: 561 NMLLNEMLEKGLVPNRITYEIV 582
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 123/261 (47%), Gaps = 6/261 (2%)
Query: 81 LSVEVSPELVA--EVLNKLSNAGVLALSFFHWAEK-QKGFKHSTESFHALIEALGKIRQF 137
L +V P +++ ++N L N G ++ + + G + + +++ALI K
Sbjct: 323 LDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDML 382
Query: 138 KVIWNLVEDMK-QRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKL 196
K ++ +K Q + T K+ + E+ME+ G+ P+V +N L
Sbjct: 383 KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442
Query: 197 VDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECF 256
+ LC++ ++E A++LFD++ +GL PDL ++ IL+EG+ ++ + + +EM
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGL 501
Query: 257 EPDVVTYGILINAYCKAKKYDEAVGFYHEMQ-EKNMMPSPHIFSTLINGLGSDKRLDEAL 315
+P +TY I++ YCK A +M+ E+ + + ++ L+ G +L++A
Sbjct: 502 KPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDAN 561
Query: 316 EFYEKFKANGFAPETPTYNAV 336
+ G P TY V
Sbjct: 562 MLLNEMLEKGLVPNRITYEIV 582
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 96/202 (47%), Gaps = 5/202 (2%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
E F++ YG K L+ L K + ++ +M R + P++ ++ +++
Sbjct: 174 EAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINAL 233
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCK----AKKYDEAVGFYHEMQEKNM 291
+ + + +V +MK P+VV+Y LI+ YCK K Y +A EM E ++
Sbjct: 234 CKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY-KADAVLKEMVENDV 292
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P+ F+ LI+G D L +++ +++ P +YN+++ C ++ +A
Sbjct: 293 SPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAIS 352
Query: 352 VVDEMKQCGVGPNSRTYDIILQ 373
+ D+M GV PN TY+ ++
Sbjct: 353 MRDKMVSAGVQPNLITYNALIN 374
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 111/204 (54%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV +AV ++M + G +P + +++V+CKS A EL KM R + D Y+
Sbjct: 208 KVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
I+++G + +L + EM+ + F+ D++TY LI +C A ++D+ +M ++
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ FS LI+ + +L EA + ++ G AP T TYN+++ +C R+++A
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
++VD M G P+ T++I++
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILIN 411
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 110/200 (55%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+E KME+ +K + ++ ++D LCK S++ A LF++M +G D+ +Y L+
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+ ++ R+M P+VVT+ +LI+++ K K EA EM ++ + P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ +++LI+G + RL+EA++ + + G P+ T+N ++ YC + R+DD +
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 354 DEMKQCGVGPNSRTYDIILQ 373
EM GV N+ TY+ ++Q
Sbjct: 427 REMSLRGVIANTVTYNTLVQ 446
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 138/282 (48%), Gaps = 2/282 (0%)
Query: 93 VLNKLSNAGVLALSFFHWAEKQ-KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRK 151
+++ L G L +F + E + KGFK +++ LI ++ L+ DM +RK
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 152 LL-TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQ 210
+ T K++EA + ++M + G+ P +N L+D CK +E+A
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 211 ELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAY 270
++ D M +G PD+ ++ IL+ G+ + + E+ REM + VTY L+ +
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 271 CKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPET 330
C++ K + A + EM + + P + L++GL + L++ALE + K + + +
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDI 508
Query: 331 PTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
Y ++ C + ++DDA+ + + GV ++R Y+I++
Sbjct: 509 GIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMI 550
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 122/260 (46%), Gaps = 1/260 (0%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVK 172
+ GF+ + ++ ++ + K Q + L+ M++R + L +
Sbjct: 221 ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLD 280
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
A F +ME G K ++ +N L+ C + + +L M R + P++ ++++L+
Sbjct: 281 NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ + ++ L +++ +EM P+ +TY LI+ +CK + +EA+ M K
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P F+ LING R+D+ LE + + G T TYN +V +C S +++ A ++
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Query: 353 VDEMKQCGVGPNSRTYDIIL 372
EM V P+ +Y I+L
Sbjct: 461 FQEMVSRRVRPDIVSYKILL 480
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 128/262 (48%), Gaps = 1/262 (0%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKM 181
+F LI++ K + + L+++M QR + T +++EA++ + M
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
G P++ FN L++ CK+ ++ ELF +M RG++ + +Y L++G+ Q L
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
++ +EM PD+V+Y IL++ C + ++A+ + ++++ M I+ +
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMII 514
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
I+G+ + ++D+A + + G + YN ++ C + A + +M + G
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGH 574
Query: 362 GPNSRTYDIILQPDKGSKNPRS 383
P+ TY+I+++ G + +
Sbjct: 575 APDELTYNILIRAHLGDDDATT 596
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 120/262 (45%), Gaps = 3/262 (1%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXKV 171
Q+G +T ++++LI+ K + + +V D+ K D T ++
Sbjct: 361 QRGIAPNTITYNSLIDGFCKENRLEEAIQMV-DLMISKGCDPDIMTFNILINGYCKANRI 419
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+ +E F +M G+ +N LV C+S +E A++LF +M R + PD+ SY IL
Sbjct: 420 DDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKIL 479
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
L+G L + E+ +++ E D+ Y I+I+ C A K D+A + + K +
Sbjct: 480 LDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGV 539
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
++ +I+ L L +A + K G AP+ TYN ++ A+ A
Sbjct: 540 KLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAE 599
Query: 352 VVDEMKQCGVGPNSRTYDIILQ 373
+++EMK G + T +++
Sbjct: 600 LIEEMKSSGFPADVSTVKMVIN 621
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 155/330 (46%), Gaps = 15/330 (4%)
Query: 48 RIHTLIPHTPHADKICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSF 107
R+ +++ T D + + + I L LS+ ++N L+L+F
Sbjct: 77 RLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSI---------MINCCCRCRKLSLAF 127
Query: 108 FHWAEKQK-GFKHSTESFHALIEAL---GKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXX 163
+ K G++ T +F LI L G++ + + + + +M + L T
Sbjct: 128 SAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLI--TLNALVN 185
Query: 164 XXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVP 223
KV +AV ++M + G +P + ++ V+CKS A EL KM R +
Sbjct: 186 GLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL 245
Query: 224 DLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFY 283
D Y+I+++G + +L + EM+ + F+ D++ Y LI +C A ++D+
Sbjct: 246 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLL 305
Query: 284 HEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWS 343
+M ++ + P FS LI+ + +L EA E +++ G +P+T TY +++ +C
Sbjct: 306 RDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365
Query: 344 MRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
++D A ++D M G GPN RT++I++
Sbjct: 366 NQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 144/298 (48%), Gaps = 6/298 (2%)
Query: 93 VLNKLSNAGVLALSFFHWAEKQ-KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRK 151
+++ L G L +F + E + KGFK + LI ++ L+ DM +RK
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 152 LLTRDTXXXXXXXX--XXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKA 209
+ T D K++EA E ++M + G+ P+ + L+D CK ++KA
Sbjct: 313 I-TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371
Query: 210 QELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINA 269
+ D M +G P+++++ IL+ G+ + + E+ R+M D VTY LI
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431
Query: 270 YCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPE 329
+C+ K + A + EM + + P + L++GL + ++ALE +EK + + +
Sbjct: 432 FCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD 491
Query: 330 TPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQP--DKGSKNPRSLL 385
YN ++ C + ++DDA+ + + GV P+ +TY+I++ KGS + LL
Sbjct: 492 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL 549
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 130/261 (49%), Gaps = 3/261 (1%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXX--XXXKVKEAVETFEK 180
+F ALI+ K + + L ++M QR + + DT ++ +A +
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGI-SPDTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
M G P + FN L++ CK+ ++ ELF KM RG+V D +Y L++G+ +
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
L E+ +EM PD+V+Y IL++ C + ++A+ + ++++ M I++
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
+I+G+ + ++D+A + + G P+ TYN ++G C + +A + +M++ G
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
Query: 361 VGPNSRTYDIILQPDKGSKNP 381
PN TY+I+++ G +
Sbjct: 558 HSPNGCTYNILIRAHLGEGDA 578
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 106/215 (49%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ + +E F KM G+ + +N L+ C+ +E A+ELF +M R + PD+ SY I
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
LL+G + E+ +++ E D+ Y I+I+ C A K D+A + + K
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ P ++ +I GL L EA + K + +G +P TYN ++ A+ +
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSA 582
Query: 351 RVVDEMKQCGVGPNSRTYDIILQPDKGSKNPRSLL 385
++++E+K+CG ++ T +++ + +S L
Sbjct: 583 KLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFL 617
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 35/204 (17%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K +AV+ F++M + +P + DF++L V+ ++K + LV DL
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYD-------------LVLDL---- 94
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
C++M+ + ++ T I+IN C+ +K A ++ +
Sbjct: 95 ------------------CKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKL 136
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P FSTLINGL + R+ EALE ++ G P T NA+V C + ++ DA
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
++D M + G PN TY +L+
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLK 220
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 188/434 (43%), Gaps = 78/434 (17%)
Query: 2 AFSRSPKRFFNLFSSNLPLSKPYPASLTPLSTSPTIKLPQNLSGSLRIHTLIPHTPHADK 61
AF K+F + P+++ S++PL + LP+ S S+ + PH +
Sbjct: 19 AFEVLKKKFSTDVTVPSPVTRRQFCSVSPLLRN----LPEEESDSMSV-------PH--R 65
Query: 62 ICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHST 121
+ ILSK PN +L + +SP V+ + + L AL+F HW + +KHS
Sbjct: 66 LLSILSK-PNWHKSPSLKSMVSAISPSHVSSLFS-LDLDPKTALNFSHWISQNPRYKHSV 123
Query: 122 ESFHALIEAL------GKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAV 175
S+ +L+ L G + + +++ D L D K K +
Sbjct: 124 YSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLII 183
Query: 176 ETFE----KMEKYGLK----------------PEVSDFNKLVDVLCKSKSVEKAQELFDK 215
+ + ++GL P + +NK+V+ CK +VE+A + K
Sbjct: 184 GCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSK 243
Query: 216 MRHRGLVPDLKSYTILLEGWSQQQNL--------------LRVNEV---------CREMK 252
+ GL PD +YT L+ G+ Q+++L R NEV C +
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Query: 253 C-------------ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
ECF P V TY +LI + C +++ EA+ EM+E + P+ H ++
Sbjct: 304 IDEAMDLFVKMKDDECF-PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQC 359
LI+ L S + ++A E + G P TYNA++ YC ++DA VV+ M+
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 360 GVGPNSRTYDIILQ 373
+ PN+RTY+ +++
Sbjct: 423 KLSPNTRTYNELIK 436
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 122/263 (46%), Gaps = 6/263 (2%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKE 173
+KG + +++ALI K + ++VE M+ RKL V +
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK 445
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+ KM + + P+V +N L+D C+S + + A L M RGLVPD +YT +++
Sbjct: 446 AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMID 505
Query: 234 GWSQQQNLLRVNEVCR---EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+ + RV E C ++ + P+VV Y LI+ YCKA K DEA +M KN
Sbjct: 506 SLCKSK---RVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+P+ F+ LI+GL +D +L EA EK G P T ++ D AY
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 351 RVVDEMKQCGVGPNSRTYDIILQ 373
+M G P++ TY +Q
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQ 645
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 1/199 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ EA++ F KM+ P V + L+ LC S+ +A L +M G+ P++ +YT
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L++ Q + E+ +M + P+V+TY LIN YCK ++AV M+ +
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ ++ LI G + +A+ K P+ TYN+++ C S D A
Sbjct: 423 KLSPNTRTYNELIKGY-CKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 350 YRVVDEMKQCGVGPNSRTY 368
YR++ M G+ P+ TY
Sbjct: 482 YRLLSLMNDRGLVPDQWTY 500
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 124/263 (47%), Gaps = 2/263 (0%)
Query: 120 STESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFE 179
+T +++ LI+ K K + L + ++++ L T A
Sbjct: 427 NTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
M GL P+ + ++D LCKSK VE+A +LFD + +G+ P++ YT L++G+ +
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546
Query: 240 NLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
+ + + +M + P+ +T+ LI+ C K EA +M + + P+ +
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDT 606
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQC 359
LI+ L D D A +++ ++G P+ TY + YC R+ DA ++ +M++
Sbjct: 607 ILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMREN 666
Query: 360 GVGPNSRTYDIILQ--PDKGSKN 380
GV P+ TY +++ D G N
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGQTN 689
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 109/207 (52%), Gaps = 1/207 (0%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A + F +M G + + L+ LC ++ +++A +LF KM+ P +++YT+L++
Sbjct: 272 AFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIK 331
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ + +EM+ +P++ TY +LI++ C K+++A +M EK +MP
Sbjct: 332 SLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMP 391
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ ++ LING +++A++ E ++ +P T TYN ++ YC S + A V+
Sbjct: 392 NVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVL 450
Query: 354 DEMKQCGVGPNSRTYDIILQPDKGSKN 380
++M + V P+ TY+ ++ S N
Sbjct: 451 NKMLERKVLPDVVTYNSLIDGQCRSGN 477
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 114/247 (46%), Gaps = 1/247 (0%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKM 181
++++LI+ + F + L+ M R L+ T +V+EA + F+ +
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL 523
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
E+ G+ P V + L+D CK+ V++A + +KM + +P+ ++ L+ G L
Sbjct: 524 EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 583
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
+ +M +P V T ILI+ K +D A + +M P H ++T
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 643
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
I + RL +A + K + NG +P+ TY++++ Y + + A+ V+ M+ G
Sbjct: 644 IQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGC 703
Query: 362 GPNSRTY 368
P+ T+
Sbjct: 704 EPSQHTF 710
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 115/280 (41%), Gaps = 20/280 (7%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKV 171
+QKG + + ALI+ K + ++E M + L T K+
Sbjct: 524 EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 583
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
KEA EKM K GL+P VS L+ L K + A F +M G PD +YT
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 643
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++ + ++ LL ++ +M+ PD+ TY LI Y + + A M++
Sbjct: 644 IQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGC 703
Query: 292 MPSPHIFSTLINGL---------GSDKRL---------DEALEFYEKFKANGFAPETPTY 333
PS H F +LI L GS+ L D +E EK + P +Y
Sbjct: 704 EPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSY 763
Query: 334 NAVVGAYCWSMRMDDAYRVVDEMKQC-GVGPNSRTYDIIL 372
++ C + A +V D M++ G+ P+ ++ +L
Sbjct: 764 EKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALL 803
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 110/266 (41%), Gaps = 19/266 (7%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVK 172
++ G ++ +LI+ G + Q +++++ M RDT +K
Sbjct: 664 RENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM-------RDTGCEPSQHTFLSL-IK 715
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+E +K G +PE+ + +++ + EL +KM + P+ KSY L+
Sbjct: 716 HLLEMKYGKQK-GSEPELCAMSNMMEF-------DTVVELLEKMVEHSVTPNAKSYEKLI 767
Query: 233 EGWSQQQNLLRVNEVCREM-KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
G + NL +V M + E P + + L++ CK KK++EA +M
Sbjct: 768 LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGH 827
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
+P LI GL + ++ G+ + + ++ ++ Y
Sbjct: 828 LPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYE 887
Query: 352 VVDEMKQCGVGPNSRTYDIILQ--PD 375
+ + M++ G +S+TY ++++ PD
Sbjct: 888 LFNVMEKNGCKFSSQTYSLLIEGPPD 913
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 144/308 (46%), Gaps = 10/308 (3%)
Query: 76 AALADLSVEVSPELVAEVLNKL---------SNAGVLALSFFHWAEKQKGFKHSTESFHA 126
+ L +L+V VS LV EVL + + LA FF W+ +Q+ F+H+ S+H
Sbjct: 95 SVLDELNVRVSGLLVREVLVGILRNLSYDNKARCAKLAYRFFLWSGEQECFRHTVNSYHL 154
Query: 127 LIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYG 185
L++ + ++K +W LV++M Q T T K+AV F K + +
Sbjct: 155 LMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFN 214
Query: 186 LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVN 245
+P +N +++ L K + + ++ +M G PD+ +Y ILL + + R +
Sbjct: 215 YRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFD 274
Query: 246 EVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGL 305
+ EM + F PD TY IL++ K K A+ + M+E + PS ++TLI+GL
Sbjct: 275 RLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGL 334
Query: 306 GSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNS 365
L+ F ++ G P+ Y ++ Y S +D A + EM G PN
Sbjct: 335 SRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNV 394
Query: 366 RTYDIILQ 373
TY+ +++
Sbjct: 395 FTYNSMIR 402
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 116/248 (46%), Gaps = 10/248 (4%)
Query: 117 FKHSTESFHALIEALGKIRQFKVI-W---NLVEDMKQRKLLTRDTXXXXXXXXXXXXKVK 172
FKHS ++A++ +L ++Q+K+I W ++ED +LT + K+
Sbjct: 218 FKHS---YNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLG---KMD 271
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
F++M + G P+ +N L+ +L K A + M+ G+ P + YT L+
Sbjct: 272 RFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLI 331
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+G S+ NL EM PDVV Y ++I Y + + D+A + EM K +
Sbjct: 332 DGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQL 391
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ ++++I GL EA ++ ++ G P Y+ +V + ++ +A +V
Sbjct: 392 PNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKV 451
Query: 353 VDEMKQCG 360
+ EM + G
Sbjct: 452 IREMVKKG 459
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 109/204 (53%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++++A+ F+++ G KP V + L+ LCK++ + A ELF++M G P++ +Y
Sbjct: 168 RIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYN 227
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G + + R+M EP+V+T+ LI+A+ K K EA Y+ M +
Sbjct: 228 ALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQM 287
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++ P + +LINGL LDEA + + + NG P Y ++ +C S R++D
Sbjct: 288 SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDG 347
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
++ EM Q GV N+ TY +++Q
Sbjct: 348 MKIFYEMSQKGVVANTITYTVLIQ 371
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 99/202 (49%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ AVE F +M G +P V +N LV LC+ A L M R + P++ ++T
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++ + + L+ E+ M PDV TYG LIN C DEA ++ M+
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P+ I++TLI+G KR+++ ++ + + G T TY ++ YC R D A
Sbjct: 324 CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQ 383
Query: 351 RVVDEMKQCGVGPNSRTYDIIL 372
V ++M P+ RTY+++L
Sbjct: 384 EVFNQMSSRRAPPDIRTYNVLL 405
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 119/249 (47%), Gaps = 5/249 (2%)
Query: 123 SFHALIEA---LGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFE 179
+F ALI+A +GK+ + K ++N++ M + T + EA + F
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVF--TYGSLINGLCMYGLLDEARQMFY 317
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
ME+ G P + L+ CKSK VE ++F +M +G+V + +YT+L++G+
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG 377
Query: 240 NLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
EV +M PD+ TY +L++ C K ++A+ + M+++ M + ++
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYT 437
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQC 359
+I G+ ++++A + + + G P TY ++ +C + +A + +MK+
Sbjct: 438 IIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKED 497
Query: 360 GVGPNSRTY 368
G PN Y
Sbjct: 498 GFLPNESVY 506
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 100/203 (49%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ +A++ F +M P + DF +L+ V+ K + LF++M+ G+ P L +
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
I++ R + +M FEPD+VT+ L+N YC + ++A+ + ++
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P+ ++TLI L ++ L+ A+E + + NG P TYNA+V C R DA
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
++ +M + + PN T+ ++
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALI 265
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 121/258 (46%), Gaps = 1/258 (0%)
Query: 116 GFKHSTESFHALIEALGKI-RQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEA 174
G + + +++AL+ L +I R W L + MK+R T K+ EA
Sbjct: 218 GSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEA 277
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
E + M + + P+V + L++ LC +++A+++F M G P+ YT L+ G
Sbjct: 278 KELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHG 337
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
+ + + + ++ EM + + +TY +LI YC + D A +++M + P
Sbjct: 338 FCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPD 397
Query: 295 PHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD 354
++ L++GL + ++++AL +E + TY ++ C +++DA+ +
Sbjct: 398 IRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFC 457
Query: 355 EMKQCGVGPNSRTYDIIL 372
+ G+ PN TY ++
Sbjct: 458 SLFSKGMKPNVITYTTMI 475
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 116/261 (44%), Gaps = 5/261 (1%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVK--- 172
GFK + ++ LI L K R L M +R ++
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNG--SRPNVVTYNALVTGLCEIGRWG 240
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+A M K ++P V F L+D K + +A+EL++ M + PD+ +Y L+
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G L ++ M+ P+ V Y LI+ +CK+K+ ++ + ++EM +K ++
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
+ ++ LI G R D A E + + + P+ TYN ++ C + +++ A +
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420
Query: 353 VDEMKQCGVGPNSRTYDIILQ 373
+ M++ + N TY II+Q
Sbjct: 421 FEYMRKREMDINIVTYTIIIQ 441
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
+ FE+M+ G+ P + N ++ +C S +A KM G PDL ++T LL
Sbjct: 102 VISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLN 161
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+ + + ++ F+P+VVTY LI CK + + AV +++M P
Sbjct: 162 GYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRP 221
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ ++ L+ GL R +A P T+ A++ A+ ++ +A +
Sbjct: 222 NVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELY 281
Query: 354 DEMKQCGVGPNSRTY 368
+ M Q V P+ TY
Sbjct: 282 NVMIQMSVYPDVFTY 296
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 55/116 (47%)
Query: 258 PDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEF 317
P ++ + L++ K +YD + + +MQ + P + +++ + + A F
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140
Query: 318 YEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
K GF P+ T+ +++ YC R++DA + D++ G PN TY +++
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIR 196
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 112/204 (54%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ E ++M GL V +N ++D LCK++ +E A +M+ RG+ P+L ++
Sbjct: 405 RFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFN 464
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L G+S + ++ +V+ V ++ F+PDV+T+ ++IN C+AK+ +A + EM E
Sbjct: 465 TFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEW 524
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ ++ LI S D +++ + K K NG +P+ YNA + ++C ++ A
Sbjct: 525 GIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKA 584
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
++ M + G+ P++ TY +++
Sbjct: 585 EELLKTMLRIGLKPDNFTYSTLIK 608
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 111/249 (44%), Gaps = 3/249 (1%)
Query: 125 HALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKY 184
H + L + F+V LV M++ L R KE + K+ +
Sbjct: 293 HGIFRCLPPCKAFEV---LVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGER 349
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
G P+ S FN + L K + + +FD RG+ P Y +L++ Q
Sbjct: 350 GYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEG 409
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLING 304
+ ++M + V +Y +I+ CKA++ + A F EMQ++ + P+ F+T ++G
Sbjct: 410 DRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSG 469
Query: 305 LGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPN 364
+ + EK +GF P+ T++ ++ C + + DA+ EM + G+ PN
Sbjct: 470 YSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPN 529
Query: 365 SRTYDIILQ 373
TY+I+++
Sbjct: 530 EITYNILIR 538
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 104/225 (46%), Gaps = 7/225 (3%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR----KLLTRDTXXXXXXXXXXXXKV 171
G S S++A+I+ L K R+ + + +M+ R L+T +T KV
Sbjct: 420 GLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKV 479
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+E K+ +G KP+V F+ +++ LC++K ++ A + F +M G+ P+ +Y IL
Sbjct: 480 HGVLE---KLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNIL 536
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+ + R ++ +MK PD+ Y I ++CK +K +A M +
Sbjct: 537 IRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGL 596
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAV 336
P +STLI L R EA E + + +G P++ T V
Sbjct: 597 KPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLV 641
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 35/233 (15%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
+ F ++ G+KP +N ++D L KS S++ A F +MR G PD +Y IL+ G
Sbjct: 166 DVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGV 225
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSP 295
++ + + ++M+ E P+V TY ILI+ + A + DEA+ M+ + + P+
Sbjct: 226 CKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNE 285
Query: 296 HIFSTLINGL--------------------------GSDKRL---------DEALEFYEK 320
T ++G+ G D L E +F K
Sbjct: 286 ATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRK 345
Query: 321 FKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
G+ P++ T+NA + + + R+ D GV P Y +++Q
Sbjct: 346 IGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQ 398
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 117/293 (39%), Gaps = 36/293 (12%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEA 174
G K ST ++A+I+AL K + + + M+ R T V EA
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGL------------- 221
+ ++ME+ G +P V + L+D + V++A + + MR R L
Sbjct: 235 IRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHG 294
Query: 222 ----VPDLKSYTILLEGWSQQQNLLRV------------------NEVCREMKCECFEPD 259
+P K++ +L+ + NL RV + R++ + PD
Sbjct: 295 IFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPD 354
Query: 260 VVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYE 319
T+ ++ K E + + + P + + L+ L + +R E + +
Sbjct: 355 SSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLK 414
Query: 320 KFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+ +G +YNAV+ C + R+++A + EM+ G+ PN T++ L
Sbjct: 415 QMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFL 467
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 71/159 (44%)
Query: 209 AQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILIN 268
+ EL ++R G + +L+ W + N+V ++ +P Y +I+
Sbjct: 129 SMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVID 188
Query: 269 AYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAP 328
A K+ D A + +M+ P ++ LI+G+ +DEA+ ++ + G P
Sbjct: 189 ALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRP 248
Query: 329 ETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
TY ++ + + R+D+A + ++ M+ + PN T
Sbjct: 249 NVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEAT 287
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 112/222 (50%), Gaps = 9/222 (4%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V A+ F KM G KP + +F L+D LCK S+++A E+ ++M G P++ ++T
Sbjct: 268 VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 327
Query: 231 LLEG-----WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHE 285
L++G W+++ L + V + + ++P+V TY +I YCK K + A +
Sbjct: 328 LIDGLCKRGWTEKAFRLFLKLV----RSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSR 383
Query: 286 MQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMR 345
M+E+ + P+ + ++TLING A E GF P TYNA + + C R
Sbjct: 384 MKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSR 443
Query: 346 MDDAYRVVDEMKQCGVGPNSRTYDIILQPDKGSKNPRSLLGF 387
+AY ++++ CG+ + TY I++Q + L F
Sbjct: 444 APEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAF 485
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 1/203 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM-RHRGLVPDLKSYT 229
+K+A E E+M + G KP V L+D LCK EKA LF K+ R P++ +YT
Sbjct: 303 IKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYT 362
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ G+ ++ L R + MK + P+V TY LIN +CKA + A + M ++
Sbjct: 363 SMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDE 422
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
MP+ + ++ I+ L R EA E K + G + TY ++ C ++ A
Sbjct: 423 GFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQA 482
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
M + G + R +I++
Sbjct: 483 LAFFCRMNKTGFEADMRLNNILI 505
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 144/345 (41%), Gaps = 52/345 (15%)
Query: 65 ILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESF 124
++S +D L+ E + +VA + ++ + ++AL FF+WA + F+H +
Sbjct: 73 VVSSPHRVNLDFDANSLTHEQAITVVASLASE--SGSMVALCFFYWAVGFEKFRHFMRLY 130
Query: 125 HALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKY 184
++L NL + + + + R+ ++ EAV M+
Sbjct: 131 LVTADSL------LANGNLQKAHEVMRCMLRN--------FSEIGRLNEAVGMVMDMQNQ 176
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
GL P N ++++ + +E A+ +FD+M RG+VPD SY +++ G + +
Sbjct: 177 GLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEA 236
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLING 304
+ M F PD T +++ A C+ + A+ ++ +M + P+ F++LI+G
Sbjct: 237 DRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDG 296
Query: 305 LGSDKRLDEALEFYEKFKANG------------------------------------FAP 328
L + +A E E+ NG + P
Sbjct: 297 LCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKP 356
Query: 329 ETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
TY +++G YC +++ A + MK+ G+ PN TY ++
Sbjct: 357 NVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 401
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ A F +M++ GL P V+ + L++ CK+ S +A EL + M G +P++ +Y
Sbjct: 373 KLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYN 432
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ ++ E+ + E D VTY ILI CK ++A+ F+ M +
Sbjct: 433 AAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKT 492
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ + LI K++ E+ ++ + G P TY +++ YC +D A
Sbjct: 493 GFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLA 552
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
+ MK+ G P+S TY ++
Sbjct: 553 LKYFHNMKRHGCVPDSFTYGSLI 575
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 93/190 (48%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A E M G P + +N +D LCK +A EL +K GL D +YTIL++
Sbjct: 412 AYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQ 471
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+Q ++ + M FE D+ ILI A+C+ KK E+ + + ++P
Sbjct: 472 EQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIP 531
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ ++++I+ + +D AL+++ K +G P++ TY +++ C +D+A ++
Sbjct: 532 TKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLY 591
Query: 354 DEMKQCGVGP 363
+ M G+ P
Sbjct: 592 EAMIDRGLSP 601
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 63/123 (51%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ +A+ F +M K G + ++ N L+ C+ K +++++ LF + GL+P ++YT
Sbjct: 479 INQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTS 538
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++ + ++ ++ + MK PD TYG LI+ CK DEA Y M ++
Sbjct: 539 MISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRG 598
Query: 291 MMP 293
+ P
Sbjct: 599 LSP 601
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 9/155 (5%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+KE+ F+ + GL P + ++ CK ++ A + F M+ G VPD +Y
Sbjct: 513 KMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYG 572
Query: 230 ILLEGWSQQQNLLRVNEVCR---EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
L+ G ++ V+E C+ M P VT L YCK A+ +
Sbjct: 573 SLISGLCKKS---MVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPL 629
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKF 321
+K + + TL+ L S+K++ A F++K
Sbjct: 630 DKKLWIRTVR---TLVRKLCSEKKVGVAALFFQKL 661
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 111/203 (54%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+K+AV +MEK G+K +V L+D LCK++ V A E+ +M+ RG+ P++ +Y+
Sbjct: 29 IKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSS 88
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ G + L EM + P+V+T+ LI+AY K K + Y M + +
Sbjct: 89 LITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMS 148
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ P+ +S+LI GL R+DEA++ + + G P TY+ + + S R+DD
Sbjct: 149 IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGI 208
Query: 351 RVVDEMKQCGVGPNSRTYDIILQ 373
+++D+M Q GV N+ + + +++
Sbjct: 209 KLLDDMPQRGVAANTVSCNTLIK 231
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 94/189 (49%)
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
KM K G++P++ + LV+ C S S++ A + +M G+ D+ TIL++ + +
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 240 NLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
++ EV + MK P+VVTY LI CK+ + +A HEM K + P+ FS
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQC 359
LI+ +L + Y+ P TY++++ C R+D+A +++D M
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 360 GVGPNSRTY 368
G PN TY
Sbjct: 183 GCTPNVVTY 191
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 99/203 (48%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ + ++ M + + P V ++ L+ LC V++A ++ D M +G P++ +Y+
Sbjct: 133 KLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYS 192
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L G+ + + ++ +M + V+ LI Y +A K D A+G + M
Sbjct: 193 TLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSN 252
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++P+ ++ ++ GL ++ +++AL +E + + TY ++ C + + +A
Sbjct: 253 GLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEA 312
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
Y + ++K V P+ + Y I++
Sbjct: 313 YDLFYKLKFKRVEPDFKAYTIMI 335
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 102/235 (43%), Gaps = 35/235 (14%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+E ++M+ G+ P V ++ L+ LCKS + A+ +M + + P++ +++ L++
Sbjct: 67 ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALID 126
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDV--------------------------------- 260
++++ L +V+ V + M +P+V
Sbjct: 127 AYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTP 186
Query: 261 --VTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFY 318
VTY L N + K+ + D+ + +M ++ + + +TLI G ++D AL +
Sbjct: 187 NVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVF 246
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+NG P +YN V+ + ++ A + M++ + TY I++
Sbjct: 247 GYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIH 301
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 61/117 (52%)
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
EPD+VT L+N +C + +AV +M++ + + + LI+ L ++ + AL
Sbjct: 9 IEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPAL 68
Query: 316 EFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
E ++ K G +P TY++++ C S R+ DA R + EM + PN T+ ++
Sbjct: 69 EVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALI 125
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 131/272 (48%), Gaps = 24/272 (8%)
Query: 108 FHWAEKQKGFKHSTESFHALI---EALGK-IRQFKVIWN-LVEDMKQRKLLTRDTXXXXX 162
F + G H E+ AL EALGK I+ +++N L++ + + ++
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMIL-------- 408
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
EA + +M + GL PEV FN LV+ LCK V A L M +G
Sbjct: 409 ----------EAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYF 458
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
PD+ ++ IL+ G+S Q + E+ M +PDV TY L+N CK K+++ +
Sbjct: 459 PDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMET 518
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
Y M EK P+ F+ L+ L ++LDEAL E+ K P+ T+ ++ +C
Sbjct: 519 YKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCK 578
Query: 343 SMRMDDAYRVVDEMKQC-GVGPNSRTYDIILQ 373
+ +D AY + +M++ V ++ TY+II+
Sbjct: 579 NGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIH 610
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 123/268 (45%), Gaps = 2/268 (0%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR--KLLTRDTXXXX 161
AL F+ K+ GFKH+ ++ ++IE LG +F+ + ++ DM++ +
Sbjct: 23 ALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGA 82
Query: 162 XXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGL 221
KV+EAV FE+M+ Y +P V +N ++ VL S ++A +++ +MR RG+
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 222 VPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVG 281
PD+ S+TI ++ + + + M + E +VV Y ++ + + E
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 282 FYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
+ +M + F+ L+ L + E + +K G P TYN + C
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 342 WSMRMDDAYRVVDEMKQCGVGPNSRTYD 369
+D A R+V + + G P+ TY+
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYN 290
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 93/189 (49%)
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
G P+ + L+D LC +A LF++ +G+ P++ Y L++G S Q +L
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLING 304
++ EM + P+V T+ IL+N CK +A G M K P F+ LI+G
Sbjct: 411 AQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 305 LGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPN 364
+ +++ ALE + NG P+ TYN+++ C + + +D M + G PN
Sbjct: 471 YSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPN 530
Query: 365 SRTYDIILQ 373
T++I+L+
Sbjct: 531 LFTFNILLE 539
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 9/216 (4%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
E E F KM G+ +S FNKL+ VLCK V++ ++L DK+ RG++P+L +Y + +
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 233 EGWSQQQNLLRVNEVCREMKC---ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+G Q+ L + R + C + +PDV+TY LI CK K+ EA + +M +
Sbjct: 259 QGLCQRGEL---DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNE 315
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P + ++TLI G + A NGF P+ TY +++ C + A
Sbjct: 316 GLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRA 375
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQPDKGSKNPRSLL 385
+ +E G+ PN Y+ ++ KG N +L
Sbjct: 376 LALFNEALGKGIKPNVILYNTLI---KGLSNQGMIL 408
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 149/358 (41%), Gaps = 11/358 (3%)
Query: 19 PLSKPYPASLTPLSTSPTIKLPQNLSGSLRIHTLIP----HTPHADKICKILSKSPNSTI 74
P S Y + ++L + + G + +P + D +C N +
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCH--EGETNRAL 376
Query: 75 DAALADLSVEVSPELVA--EVLNKLSNAG-VLALSFFHWAEKQKGFKHSTESFHALIEAL 131
L + P ++ ++ LSN G +L + +KG ++F+ L+ L
Sbjct: 377 ALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGL 436
Query: 132 GKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEV 190
K+ LV+ M + T K++ A+E + M G+ P+V
Sbjct: 437 CKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDV 496
Query: 191 SDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCRE 250
+N L++ LCK+ E E + M +G P+L ++ ILLE + + L + E
Sbjct: 497 YTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEE 556
Query: 251 MKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPH-IFSTLINGLGSDK 309
MK + PD VT+G LI+ +CK D A + +M+E + S ++ +I+
Sbjct: 557 MKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKL 616
Query: 310 RLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
+ A + +++ P+ TY +V +C + ++ Y+ + EM + G P+ T
Sbjct: 617 NVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTT 674
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K +EA KM GL+P+ +N L+ CK V+ A+ + G VPD +Y
Sbjct: 301 KFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYR 360
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L++G + R + E + +P+V+ Y LI EA +EM EK
Sbjct: 361 SLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEK 420
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++P F+ L+NGL + +A + + G+ P+ T+N ++ Y ++M++A
Sbjct: 421 GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENA 480
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
++D M GV P+ TY+ +L
Sbjct: 481 LEILDVMLDNGVDPDVYTYNSLLN 504
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 116/259 (44%), Gaps = 1/259 (0%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEA 174
G +F+ L+ L K K L++ + +R +L T ++ A
Sbjct: 211 GVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGA 270
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
V + + G KP+V +N L+ LCK+ ++A+ KM + GL PD +Y L+ G
Sbjct: 271 VRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAG 330
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
+ + + + + F PD TY LI+ C + + A+ ++E K + P+
Sbjct: 331 YCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390
Query: 295 PHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD 354
+++TLI GL + + EA + + G PE T+N +V C + DA +V
Sbjct: 391 VILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK 450
Query: 355 EMKQCGVGPNSRTYDIILQ 373
M G P+ T++I++
Sbjct: 451 VMISKGYFPDIFTFNILIH 469
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 1/162 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPD-LKSY 228
K+ EA+ E+M+ + P+ F L+D CK+ ++ A LF KM V +Y
Sbjct: 546 KLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTY 605
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
I++ ++++ N+ ++ +EM C PD TY ++++ +CK + F EM E
Sbjct: 606 NIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMME 665
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPET 330
+PS +IN L + R+ EA + G PE
Sbjct: 666 NGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 2/182 (1%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVK 172
+KG + +F+ L+E+L + R+ L+E+MK + + T +
Sbjct: 524 EKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583
Query: 173 EAVETFEKMEK-YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
A F KME+ Y + +N ++ + +V A++LF +M R L PD +Y ++
Sbjct: 584 GAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLM 643
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++G+ + N+ + EM F P + T G +IN C + EA G H M +K +
Sbjct: 644 VDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGL 703
Query: 292 MP 293
+P
Sbjct: 704 VP 705
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 152/310 (49%), Gaps = 4/310 (1%)
Query: 66 LSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFH 125
L S N + + +L + P V VL + V AL FF+WA++Q ++H ++
Sbjct: 153 LRSSWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERV-ALKFFYWADRQWRYRHDPMVYY 211
Query: 126 ALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKMEKY 184
+++E L K + + ++ MK+R + T + ++++A++ M++
Sbjct: 212 SMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRA 271
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
G++P + N +DV ++ +EKA ++M+ G+VP++ +Y ++ G+ +
Sbjct: 272 GVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEA 331
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM-QEKNMMPSPHIFSTLIN 303
E+ +M + PD V+Y ++ CK K+ E +M +E ++P ++TLI+
Sbjct: 332 IELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIH 391
Query: 304 GLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG-VG 362
L DEAL F + + GF + Y+A+V A C RM +A +++EM G
Sbjct: 392 MLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCP 451
Query: 363 PNSRTYDIIL 372
P+ TY ++
Sbjct: 452 PDVVTYTAVV 461
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%)
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
E + K P+V + +V+ C+ V+KA++L M G P+ SYT LL G +
Sbjct: 443 EMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRT 502
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
L E+ + + P+ +TY ++++ + K EA EM K P P
Sbjct: 503 GKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEI 562
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM 356
+ L+ L D R EA +F E+ G A + V+ +C + +D A V+D+M
Sbjct: 563 NLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDM 620
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 123/256 (48%), Gaps = 6/256 (2%)
Query: 122 ESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETF--- 178
ES H L+ +G++ + WN + + R LL + A++ F
Sbjct: 138 ESRHPLVREVGRLIGLRSSWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWA 197
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
++ +Y P V + +++VL K+K + ++ + M+ RG+ ++++ ++ +S+
Sbjct: 198 DRQWRYRHDPMV--YYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRA 255
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
L +V M+ EP+++ I+ + +A + ++A+ F MQ ++P+ +
Sbjct: 256 GQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTY 315
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM-K 357
+ +I G R++EA+E E + G P+ +Y ++G C R+ + ++ +M K
Sbjct: 316 NCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAK 375
Query: 358 QCGVGPNSRTYDIILQ 373
+ G+ P+ TY+ ++
Sbjct: 376 EHGLVPDQVTYNTLIH 391
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 118/272 (43%), Gaps = 3/272 (1%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXX 161
AL F A+ +KGF+ + A++ AL K + +L+ +M + D T
Sbjct: 402 ALWFLKDAQ-EKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAV 460
Query: 162 XXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGL 221
+V +A + + M +G KP + L++ +C++ +A+E+ +
Sbjct: 461 VNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWW 520
Query: 222 VPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVG 281
P+ +Y++++ G ++ L +V REM + F P V +L+ + C+ + EA
Sbjct: 521 SPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARK 580
Query: 282 FYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
F E K + F+T+I+G + LD AL + + TY +V
Sbjct: 581 FMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLG 640
Query: 342 WSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
R+ +A ++ +M G+ P TY ++
Sbjct: 641 KKGRIAEATELMKKMLHKGIDPTPVTYRTVIH 672
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 39/242 (16%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM-RHRGLVPDLKSY 228
+V+EA+E E M G P+ + ++ LCK K + + ++L KM + GLVPD +Y
Sbjct: 327 RVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTY 386
Query: 229 TILLEGWSQ--------------QQNLLRVNEV---------CRE--------------M 251
L+ ++ Q+ R++++ C+E
Sbjct: 387 NTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLS 446
Query: 252 KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRL 311
K C PDVVTY ++N +C+ + D+A M P+ ++ L+NG+ +
Sbjct: 447 KGHC-PPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKS 505
Query: 312 DEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDII 371
EA E + + ++P + TY+ ++ ++ +A VV EM G P +++
Sbjct: 506 LEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLL 565
Query: 372 LQ 373
LQ
Sbjct: 566 LQ 567
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 80/180 (44%), Gaps = 2/180 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ EA + +M G P + N L+ LC+ +A++ ++ ++G ++ ++T
Sbjct: 539 KLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFT 598
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ G+ Q L V +M DV TY L++ K + EA +M K
Sbjct: 599 TVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHK 658
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+P + T+I+ ++D+ + EK + YN V+ C ++++A
Sbjct: 659 GIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKC--RTIYNQVIEKLCVLGKLEEA 716
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 117/218 (53%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K++EA + FE M+K+G+ P + ++ ++D CK+ +V +A L+ ++ L+P++ +
Sbjct: 249 KMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFG 308
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L++G+ + + L+ + M +P++ Y LI+ +CK+ EAVG EM+
Sbjct: 309 TLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESL 368
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
N+ P ++ LINGL + ++ EA ++K K P + TYN+++ YC M+ A
Sbjct: 369 NLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQA 428
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQPDKGSKNPRSLLGF 387
+ EM GV PN T+ ++ ++ ++ +G
Sbjct: 429 LDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGL 466
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A F M K+G+ P + +N L+ CKS ++ +A L +M L PD+ +YTIL+
Sbjct: 323 ARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILIN 382
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G + + N + ++MK E P TY LI+ YCK ++A+ EM + P
Sbjct: 383 GLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEP 442
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ FSTLI+G + + + A+ Y + G P+ TY A++ A+ M +A R+
Sbjct: 443 NIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLY 502
Query: 354 DEMKQCGVGPNSRTYDIIL 372
+M + G+ PN T+ ++
Sbjct: 503 SDMLEAGIHPNDHTFACLV 521
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V++A ++++ L P V F LVD CK++ + A+ LF M G+ P+L Y
Sbjct: 285 VRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNC 344
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ G + N+L + EM+ PDV TY ILIN C + EA + +M+ +
Sbjct: 345 LIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER 404
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ PS +++LI+G + +++AL+ + A+G P T++ ++ YC + A
Sbjct: 405 IFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAM 464
Query: 351 RVVDEMKQCGVGPNSRTYDIILQPDKGSKNPRSLL 385
+ EM G+ P+ TY ++ N + L
Sbjct: 465 GLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEAL 499
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 35/236 (14%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EAV +ME L P+V + L++ LC V +A LF KM++ + P +Y L+
Sbjct: 357 EAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLI 416
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G+ ++ N+ + ++C EM EP+++T+ LI+ YC + A+G Y EM K ++
Sbjct: 417 HGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIV 476
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY------------ 340
P ++ LI+ + + EAL Y G P T+ +V +
Sbjct: 477 PDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDF 536
Query: 341 ---------CWSM--------------RMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
CW+ + A R +M+ CG+ P+ +Y +L+
Sbjct: 537 YQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLK 592
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 90/195 (46%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
++ M GL P+V + L K K ++L D+M G+ P++ YTI + +
Sbjct: 187 YQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCR 246
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ ++ MK P++ TY +I+ YCK +A G Y E+ ++P+ +
Sbjct: 247 DNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVV 306
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
F TL++G + L A + G P YN ++ +C S M +A ++ EM+
Sbjct: 307 FGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEME 366
Query: 358 QCGVGPNSRTYDIIL 372
+ P+ TY I++
Sbjct: 367 SLNLSPDVFTYTILI 381
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 98/194 (50%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+++A++ +M G++P + F+ L+D C + ++ A L+ +M +G+VPD+ +YT
Sbjct: 425 MEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTA 484
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++ ++ N+ + +M P+ T+ L++ + K + A+ FY E ++
Sbjct: 485 LIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQR 544
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ F+ LI GL + + A F+ ++ G P+ +Y +++ + R+ D
Sbjct: 545 SCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTM 604
Query: 351 RVVDEMKQCGVGPN 364
+ +M + G+ PN
Sbjct: 605 MLQCDMIKTGILPN 618
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 3/141 (2%)
Query: 247 VCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLG 306
V REMKC PD ++N + +++D Y M + ++P HI+ L
Sbjct: 154 VSREMKCS---PDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCF 210
Query: 307 SDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSR 366
+ + ++ + G P Y + C +M++A ++ + MK+ GV PN
Sbjct: 211 KQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLY 270
Query: 367 TYDIILQPDKGSKNPRSLLGF 387
TY ++ + N R G
Sbjct: 271 TYSAMIDGYCKTGNVRQAYGL 291
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 141/301 (46%), Gaps = 11/301 (3%)
Query: 78 LADLSVEVSPELVAEVLNKLSNAGVL--ALSFFHWAEKQKGFKHSTESFHALIEALGKIR 135
+ DLS+++S E + ++ + G + A+ F+ K G + + + +++L+ AL ++
Sbjct: 137 MKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVK 196
Query: 136 QFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFN 194
F + L+ M ++ L + T K+KEA E ++M + G P +
Sbjct: 197 MFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRD 256
Query: 195 KLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREM--- 251
L++ L + +E A+E+ KM G VPD++++ IL+E S+ + E C EM
Sbjct: 257 LLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEV----EFCIEMYYT 312
Query: 252 KCEC-FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKR 310
C+ D+ TY LI A K K DEA + E P P +++ +I G+ +
Sbjct: 313 ACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGM 372
Query: 311 LDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDI 370
D+A F+ K P P Y ++ + DA + EM + G+ P SR +D+
Sbjct: 373 FDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDM 432
Query: 371 I 371
+
Sbjct: 433 V 433
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 129/299 (43%), Gaps = 2/299 (0%)
Query: 77 ALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQ 136
+L L + V+ E V VL S + +L FF+WA + ++ + L ++L ++
Sbjct: 67 SLNSLRLPVTSEFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKK 126
Query: 137 FKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFEKMEK-YGLKPEVSDFN 194
++ +W +++ MK L ++ +T V +AVE F + K G + V +N
Sbjct: 127 YESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYN 186
Query: 195 KLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCE 254
L+ LC K A L +M +GL PD ++Y IL+ GW + E EM
Sbjct: 187 SLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRR 246
Query: 255 CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEA 314
F P +LI A + A +M + +P F+ LI + ++
Sbjct: 247 GFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFC 306
Query: 315 LEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+E Y G + TY ++ A ++D+A+R+++ + G P Y I++
Sbjct: 307 IEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIK 365
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 107/200 (53%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A++ EKM ++G +P +N L+ CK K +++A E ++M RG PD+ +Y +L
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ + E+ ++ + P ++TY +I+ KA K +A+ EM+ K++ P
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+S+L+ GL + ++DEA++F+ +F+ G P T+N+++ C S + D A +
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL 542
Query: 354 DEMKQCGVGPNSRTYDIILQ 373
M G PN +Y I+++
Sbjct: 543 VFMINRGCKPNETSYTILIE 562
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 107/200 (53%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+A + M + G P V FN L++ LC+ + +A ++ +KM G P+ SY LL
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G+ +++ + R E M PD+VTY ++ A CK K ++AV +++ K
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P ++T+I+GL + +A++ ++ +A P+T TY+++VG ++D+A +
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 353 VDEMKQCGVGPNSRTYDIIL 372
E ++ G+ PN+ T++ I+
Sbjct: 507 FHEFERMGIRPNAVTFNSIM 526
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 104/203 (51%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+K+A+E ++M + P+V + L++ C+ V A +L D+MR RG PD+ +Y
Sbjct: 219 KLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYN 278
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L+ G ++ L + +M +P+V+T+ I++ + C ++ +A +M K
Sbjct: 279 VLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK 338
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
PS F+ LIN L L A++ EK +G P + +YN ++ +C +MD A
Sbjct: 339 GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRA 398
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
++ M G P+ TY+ +L
Sbjct: 399 IEYLERMVSRGCYPDIVTYNTML 421
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K E +++ + P+V +N ++ LC S +++A E+ D+M R PD+ +YT
Sbjct: 184 KAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYT 243
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL+E + + ++ EM+ PDVVTY +L+N CK + DEA+ F ++M
Sbjct: 244 ILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS 303
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P+ + ++ + S R +A + GF+P T+N ++ C + A
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRA 363
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
++++M Q G PNS +Y+ +L
Sbjct: 364 IDILEKMPQHGCQPNSLSYNPLLH 387
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 115/244 (47%), Gaps = 1/244 (0%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVK 172
+KGF S +F+ LI L + +++E M Q + K+
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
A+E E+M G P++ +N ++ LCK VE A E+ +++ +G P L +Y ++
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+G ++ + ++ EM+ + +PD +TY L+ + K DEA+ F+HE + +
Sbjct: 457 DGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIR 516
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ F++++ GL ++ D A++F G P +Y ++ + +A +
Sbjct: 517 PNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALEL 576
Query: 353 VDEM 356
++E+
Sbjct: 577 LNEL 580
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 99/204 (48%), Gaps = 3/204 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+++E + E M +G P++ L+ C+ KA ++ + + G VPD+ +Y
Sbjct: 117 ELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYN 176
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+++ G+ + + V M PDVVTY ++ + C + K +A+ M ++
Sbjct: 177 VMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P ++ LI D + A++ ++ + G P+ TYN +V C R+D+A
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
+ +++M G PN T++IIL+
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILR 317
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 155/343 (45%), Gaps = 15/343 (4%)
Query: 33 TSPTIKLPQNLSGSLRIHTLIPHTPHADKICKILSKSPNSTIDAALADLS-VEVSPELVA 91
T K+ + L GS + +I + CK I+ AL+ L + VSP++V
Sbjct: 153 TRKAAKILEILEGSGAVPDVITYNVMISGYCKA------GEINNALSVLDRMSVSPDVVT 206
Query: 92 --EVLNKLSNAGVL--ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDM 147
+L L ++G L A+ ++ + ++ LIEA + L+++M
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI-TYTILIEATCRDSGVGHAMKLLDEM 265
Query: 148 KQRKLLTRD--TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKS 205
+ R T D T ++ EA++ M G +P V N ++ +C +
Sbjct: 266 RDRGC-TPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 206 VEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGI 265
A++L M +G P + ++ IL+ ++ L R ++ +M +P+ ++Y
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 266 LINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANG 325
L++ +CK KK D A+ + M + P ++T++ L D ++++A+E + + G
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 326 FAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
+P TYN V+ + + A +++DEM+ + P++ TY
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 88/174 (50%), Gaps = 3/174 (1%)
Query: 200 LCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPD 259
+ ++ +E+ + + M + G VPD+ T L+ G+ + + ++ ++ PD
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 260 VVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYE 319
V+TY ++I+ YCKA + + A+ M ++ P ++T++ L +L +A+E +
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 320 KFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+ P+ TY ++ A C + A +++DEM+ G P+ TY++++
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 123/260 (47%), Gaps = 1/260 (0%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKE 173
Q+G + + ++ ++ L K + +NL+ M+ K+ + ++
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 277
Query: 174 -AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
A+ F +ME G++P V ++ L+ LC + A L M R + P++ ++ L+
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ + ++ L+ ++ EM +PD+ TY LIN +C + DEA + M K+
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ ++TLING KR+DE +E + + G T TY ++ + + D+A V
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 353 VDEMKQCGVGPNSRTYDIIL 372
+M GV PN TY+ +L
Sbjct: 458 FKQMVSDGVHPNIMTYNTLL 477
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 159/342 (46%), Gaps = 24/342 (7%)
Query: 40 PQNLSGSLRIHTLIPHTPHADKICKILSKSPNSTIDAALADLSVE--VSPELV--AEVLN 95
P ++ + IH L H ++ + AL D V+ P LV V+N
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAV--------------ALVDRMVQRGCQPNLVTYGVVVN 233
Query: 96 KLSNAGVLALSF--FHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL 153
L G + L+F + E K + + + +I++L K R NL +M+ + +
Sbjct: 234 GLCKRGDIDLAFNLLNKMEAAK-IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 154 -TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQEL 212
T + +A M + + P V FN L+D K + +A++L
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352
Query: 213 FDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKC-ECFEPDVVTYGILINAYC 271
+D+M R + PD+ +Y+ L+ G+ L + M +CF P+VVTY LIN +C
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLINGFC 411
Query: 272 KAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETP 331
KAK+ DE V + EM ++ ++ + ++TLI+G + D A +++ ++G P
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471
Query: 332 TYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
TYN ++ C + +++ A V + +++ + P TY+I+++
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 513
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 122/249 (48%), Gaps = 7/249 (2%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD----TXXXXXXXXXXXXKVKEAVETF 178
+F+ALI+A K + L ++M +R + D T ++ EA F
Sbjct: 332 TFNALIDAFVKEGKLVEAEKLYDEMIKRSI---DPDIFTYSSLINGFCMHDRLDEAKHMF 388
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
E M P V +N L++ CK+K +++ ELF +M RGLV + +YT L+ G+ Q
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQA 448
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
++ V ++M + P+++TY L++ CK K ++A+ + +Q M P+ + +
Sbjct: 449 RDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 508
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
+ +I G+ ++++ + + G P+ YN ++ +C ++A + +M++
Sbjct: 509 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRE 568
Query: 359 CGVGPNSRT 367
G P+S T
Sbjct: 569 DGPLPDSGT 577
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 134/270 (49%), Gaps = 2/270 (0%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXX 162
AL+ F E KG + + ++ +LI L ++ L+ DM +RK+ T
Sbjct: 279 ALNLFTEME-NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
K+ EA + +++M K + P++ ++ L++ C +++A+ +F+ M +
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
P++ +Y L+ G+ + + + E+ REM + VTY LI+ + +A+ D A
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
+ +M + P+ ++TL++GL + +L++A+ +E + + P TYN ++ C
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+ +++D + + + GV P+ Y+ ++
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ +A+ F M K P + +FNKL+ + K K + L +KM+ G+ +L +Y
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL+ + ++ + + +M +EP +VT L+N YC K+ +AV +M E
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P F+TLI+GL + EA+ ++ G P TY VV C +D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
+ ++++M+ + N Y ++
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVI 267
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 102/199 (51%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ +AV ++M + G +P+ F L+ L +A L D+M RG P+L +Y
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+++ G ++ ++ + +M+ E +VV Y +I++ CK + D+A+ + EM+ K
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ +S+LI+ L + +R +A P T+NA++ A+ ++ +A
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 350 YRVVDEMKQCGVGPNSRTY 368
++ DEM + + P+ TY
Sbjct: 350 EKLYDEMIKRSIDPDIFTY 368
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%)
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
EKM++ G+ + +N L++ C+ + A L KM G P + + + LL G+
Sbjct: 109 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
+ + + +M + PD +T+ LI+ K EAV M ++ P+ +
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY 228
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
++NGL +D A K +A Y+ V+ + C DDA + EM+
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 359 CGVGPNSRTY 368
GV PN TY
Sbjct: 289 KGVRPNVITY 298
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 141/301 (46%), Gaps = 6/301 (1%)
Query: 76 AALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIR 135
A+L D S +++ + ++ +L + LA F W EK+ +S +I LG +
Sbjct: 112 ASLEDSSFDLNHDSFYSLIWELRDEWRLAFLAFKWGEKRGC--DDQKSCDLMIWVLGNHQ 169
Query: 136 QFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNK 195
+F + W L+ DM TR +A+ TF+ M+K+ P F
Sbjct: 170 KFNIAWCLIRDMFNVSKDTRKAMFLMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQG 229
Query: 196 LVDVLCKSKSVEKAQELFDKMRHRGLVP-DLKSYTILLEGWSQ-QQNLLRVNEVCREMKC 253
L+ LC+ +EKA+E + + L P D++ + ++L GW ++ + REM
Sbjct: 230 LLCALCRHGHIEKAEEFM--LASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGN 287
Query: 254 ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDE 313
C P+ +Y +I+ + K +++ Y EM+++ + P ++++L+ L + DE
Sbjct: 288 YCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDE 347
Query: 314 ALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
A++ +K G P++ TYN+++ C + ++D A V+ M + P T+ L+
Sbjct: 348 AMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLE 407
Query: 374 P 374
Sbjct: 408 A 408
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 91/203 (44%), Gaps = 4/203 (1%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V EA + +M Y + P ++ ++ K ++ + L+D+M+ RGL P ++ Y
Sbjct: 275 VTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNS 334
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ +++ ++ +++ E +PD VTY +I C+A K D A M +N
Sbjct: 335 LVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISEN 394
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ P+ F + + +K LE + K + P T+ ++G + ++A
Sbjct: 395 LSPTVDTFHAFLEAVNFEK----TLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENAL 450
Query: 351 RVVDEMKQCGVGPNSRTYDIILQ 373
++ EM + + N Y +Q
Sbjct: 451 KIWAEMDRFEIVANPALYLATIQ 473
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 79/155 (50%), Gaps = 4/155 (2%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA++ +K+ + GLKP+ +N ++ LC++ ++ A+ + M L P + ++ L
Sbjct: 347 EAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFL 406
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
E + ++ L EV +MK P T+ +++ K K+ + A+ + EM ++
Sbjct: 407 EAVNFEKTL----EVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIV 462
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFA 327
+P ++ I GL S L++A E Y + K+ GF
Sbjct: 463 ANPALYLATIQGLLSCGWLEKAREIYSEMKSKGFV 497
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 131/262 (50%), Gaps = 3/262 (1%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXK 170
++ G + +F++L+ + ++ NL ++M R++ +D + +
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRI-EQDVFSYNTLLDAICKGGQ 389
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ A E +M + P V ++ ++D K+ ++A LF +MR+ G+ D SY
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
LL +++ ++ REM + DVVTY L+ Y K KYDE + EM+ ++
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
++P+ +STLI+G EA+E + +FK+ G + Y+A++ A C + + A
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAV 569
Query: 351 RVVDEMKQCGVGPNSRTYDIIL 372
++DEM + G+ PN TY+ I+
Sbjct: 570 SLIDEMTKEGISPNVVTYNSII 591
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 131/261 (50%), Gaps = 6/261 (2%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR----KLLTRDTXXXXXXXXXXXXKV 171
G+ ++ +F ALI A G+ + ++ MK+ L+T + +
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGM--EF 320
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
K+ + F++M++ G++P+ FN L+ V + E A+ LFD+M +R + D+ SY L
Sbjct: 321 KQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTL 380
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
L+ + + E+ +M + P+VV+Y +I+ + KA ++DEA+ + EM+ +
Sbjct: 381 LDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGI 440
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
++TL++ R +EAL+ + + G + TYNA++G Y + D+ +
Sbjct: 441 ALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKK 500
Query: 352 VVDEMKQCGVGPNSRTYDIIL 372
V EMK+ V PN TY ++
Sbjct: 501 VFTEMKREHVLPNLLTYSTLI 521
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 108/226 (47%), Gaps = 1/226 (0%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKM 181
S++ L++A+ K Q + + ++ M ++++ + + EA+ F +M
Sbjct: 376 SYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM 435
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
G+ + +N L+ + K E+A ++ +M G+ D+ +Y LL G+ +Q
Sbjct: 436 RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKY 495
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
V +V EMK E P+++TY LI+ Y K Y EA+ + E + + ++S L
Sbjct: 496 DEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSAL 555
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
I+ L + + A+ ++ G +P TYN+++ A+ S MD
Sbjct: 556 IDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMD 601
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 95/196 (48%), Gaps = 1/196 (0%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFEKM 181
S+ +I+ K +F NL +M+ + L R + + +EA++ +M
Sbjct: 411 SYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREM 470
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
G+K +V +N L+ K ++ +++F +M+ ++P+L +Y+ L++G+S+
Sbjct: 471 ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLY 530
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
E+ RE K DVV Y LI+A CK AV EM ++ + P+ ++++
Sbjct: 531 KEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSI 590
Query: 302 INGLGSDKRLDEALEF 317
I+ G +D + ++
Sbjct: 591 IDAFGRSATMDRSADY 606
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 101/188 (53%)
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
G V FN L++ CK ++ AQ++FD++ R L P + S+ L+ G+ + NL
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLING 304
+ +M+ PDV TY LINA CK K D A G + EM ++ ++P+ IF+TLI+G
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 305 LGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPN 364
+ +D E Y+K + G P+ YN +V +C + + A +VD M + G+ P+
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 365 SRTYDIIL 372
TY ++
Sbjct: 415 KITYTTLI 422
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 104/202 (51%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ E +MEK +P+V ++ L++ LCK ++ A LFD+M RGL+P+ +T
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ G S+ + + E ++M + +PD+V Y L+N +CK A M +
Sbjct: 351 LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ P ++TLI+G ++ ALE ++ NG + ++A+V C R+ DA
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAE 470
Query: 351 RVVDEMKQCGVGPNSRTYDIIL 372
R + EM + G+ P+ TY +++
Sbjct: 471 RALREMLRAGIKPDDVTYTMMM 492
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 124/266 (46%), Gaps = 2/266 (0%)
Query: 109 HWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTX-XXXXXXXXX 167
H EK + + ++ ALI AL K + L ++M +R L+ D
Sbjct: 299 HQMEKSRT-RPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSR 357
Query: 168 XXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKS 227
++ E+++KM GL+P++ +N LV+ CK+ + A+ + D M RGL PD +
Sbjct: 358 NGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKIT 417
Query: 228 YTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
YT L++G+ + ++ E+ +EM E D V + L+ CK + +A EM
Sbjct: 418 YTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREML 477
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
+ P ++ +++ + ++ +++G P TYN ++ C +M
Sbjct: 478 RAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMK 537
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILQ 373
+A ++D M GV P+ TY+ +L+
Sbjct: 538 NADMLLDAMLNIGVVPDDITYNTLLE 563
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 89/191 (46%), Gaps = 1/191 (0%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKE 173
KG + ++ L+ K N+V+ M +R L + T V+
Sbjct: 374 KGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVET 433
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+E ++M++ G++ + F+ LV +CK V A+ +M G+ PD +YT++++
Sbjct: 434 ALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMD 493
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ ++ + ++ +EM+ + P VVTY +L+N CK + A M ++P
Sbjct: 494 AFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVP 553
Query: 294 SPHIFSTLING 304
++TL+ G
Sbjct: 554 DDITYNTLLEG 564
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 125/253 (49%), Gaps = 1/253 (0%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKM 181
+F ALI+A K + L ++M +R + + T ++ EA + FE M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
P+V +N L+ CK K VE+ E+F +M RGLV + +Y IL++G Q +
Sbjct: 388 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 447
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
E+ +EM + P+++TY L++ CK K ++A+ + +Q M P+ + ++ +
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 507
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
I G+ ++++ + + G P+ YN ++ +C ++A + EMK+ G
Sbjct: 508 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 567
Query: 362 GPNSRTYDIILQP 374
PNS Y+ +++
Sbjct: 568 LPNSGCYNTLIRA 580
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 129/270 (47%), Gaps = 2/270 (0%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXX 162
A++ F K + F E F L+ A+ K+ +F V+ +L E M+ + T
Sbjct: 65 AVALFGEMVKSRPFPSIIE-FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILI 123
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
++ A+ KM K G +P + + L++ C SK + +A L D+M G
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 183
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
P+ ++ L+ G + M + +PD+VTYG+++N CK D A
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
++M++ + P I++T+I+GL K +D+AL +++ + G P TY++++ C
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
R DA R++ +M + + P+ T+ ++
Sbjct: 304 YGRWSDASRLLSDMIERKINPDVFTFSALI 333
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 122/262 (46%), Gaps = 7/262 (2%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL----LTRDTXXXXXXXXXXXXK 170
KG + ++ ++ L K + +NL+ M+Q KL L +T
Sbjct: 215 KGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK---H 271
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ +A+ F++ME G++P V ++ L+ LC A L M R + PD+ +++
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++ + ++ L+ ++ EM +P +VTY LIN +C + DEA + M K+
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P ++TLI G KR++E +E + + G T TYN ++ + D A
Sbjct: 392 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 451
Query: 351 RVVDEMKQCGVGPNSRTYDIIL 372
+ EM GV PN TY+ +L
Sbjct: 452 EIFKEMVSDGVPPNIMTYNTLL 473
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 158/339 (46%), Gaps = 18/339 (5%)
Query: 40 PQNLSGSLRIHTLIPHTPHADKICKILSKSPNSTIDAALADLSVEVSPELV--AEVLNKL 97
P ++ + IH L H ++ + + ID +A P+LV V+N L
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAM---------ALIDRMVAK---GCQPDLVTYGVVVNGL 231
Query: 98 SNAGVLALSFFHWAEKQKG-FKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TR 155
G L+F + ++G + ++ +I+ L K + NL ++M+ + +
Sbjct: 232 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 291
Query: 156 DTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDK 215
T + +A M + + P+V F+ L+D K + +A++L+D+
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 216 MRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCE-CFEPDVVTYGILINAYCKAK 274
M R + P + +Y+ L+ G+ L ++ M + CF PDVVTY LI +CK K
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYK 410
Query: 275 KYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYN 334
+ +E + + EM ++ ++ + ++ LI GL D A E +++ ++G P TYN
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470
Query: 335 AVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
++ C + +++ A V + +++ + P TY+I+++
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 509
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 103/203 (50%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ +AV F +M K P + +F+KL+ + K + L ++M++ G+ + +Y+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL+ + ++ L V +M +EP++VT L+N YC +K+ EAV +M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P+ F+TLI+GL + EA+ ++ A G P+ TY VV C D A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
+ ++++M+Q + P Y+ I+
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTII 263
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 100/202 (49%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V+E +E F +M + GL +N L+ L ++ + AQE+F +M G+ P++ +Y
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
LL+G + L + V ++ EP + TY I+I CKA K ++ + + K
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 530
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P ++T+I+G +EA +++ K +G P + YN ++ A + +
Sbjct: 531 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590
Query: 350 YRVVDEMKQCGVGPNSRTYDII 371
++ EM+ CG ++ T ++
Sbjct: 591 AELIKEMRSCGFAGDASTIGLV 612
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 101/204 (49%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ EAV ++M G +P FN L+ L +A L D+M +G PDL +Y
Sbjct: 166 RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYG 225
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+++ G ++ + + +M+ EP V+ Y +I+ CK K D+A+ + EM+ K
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 285
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ +S+LI+ L + R +A P+ T++A++ A+ ++ +A
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
++ DEM + + P+ TY ++
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLIN 369
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV++ + F + G+KP+V +N ++ C+ S E+A LF +M+ G +P+ Y
Sbjct: 516 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 575
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILIN 268
L+ + + E+ +EM+ F D T G++ N
Sbjct: 576 TLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 132/287 (45%), Gaps = 6/287 (2%)
Query: 93 VLNKLSNAGVL--ALSFFHW---AEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDM 147
VLN + N G+ L F+ + + + SF+ +I+AL K+R + M
Sbjct: 154 VLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGM 213
Query: 148 KQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSV 206
+RK L T ++ EAV ++M+ G P +N L+D LCK +
Sbjct: 214 PERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDL 273
Query: 207 EKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGIL 266
+ +L D M +G VP+ +Y L+ G + L + + M P+ VTYG L
Sbjct: 274 TRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTL 333
Query: 267 INAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGF 326
IN K ++ +AV M+E+ + HI+S LI+GL + + +EA+ + K G
Sbjct: 334 INGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGC 393
Query: 327 APETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
P Y+ +V C + ++A +++ M G PN+ TY +++
Sbjct: 394 KPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMK 440
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 119/273 (43%), Gaps = 6/273 (2%)
Query: 107 FFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMK-QRKLLTRDTXXXXXXXX 165
F A K FK + ++IE+ F + L+ ++ + +++ +
Sbjct: 63 MFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAY 122
Query: 166 XXXXKVKEAVETFEKM-EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM----RHRG 220
+AV+ F +M +++ K V FN +++V+ + E +D + +
Sbjct: 123 GKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMN 182
Query: 221 LVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAV 280
+ P+ S+ ++++ + + + R EV R M PD TY L++ CK ++ DEAV
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 281 GFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
EMQ + PSP I++ LI+GL L + + G P TYN ++
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 341 CWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
C ++D A +++ M PN TY ++
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLIN 335
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 115/263 (43%), Gaps = 6/263 (2%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKE 173
KG + +++ LI L + +L+E M K + D T + +
Sbjct: 286 KGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATD 345
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
AV ME+ G ++ L+ L K E+A L+ KM +G P++ Y++L++
Sbjct: 346 AVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVD 405
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G ++ E+ M P+ TY L+ + K +EAV + EM +
Sbjct: 406 GLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSR 465
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ +S LI+GL R+ EA+ + K G P+T Y++++ C MD A ++
Sbjct: 466 NKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLY 525
Query: 354 DEMKQCGVGPNSR----TYDIIL 372
EM C P S+ TY+I+L
Sbjct: 526 HEM-LCQEEPKSQPDVVTYNILL 547
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 115/262 (43%), Gaps = 1/262 (0%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKV 171
+ +G S ++ LI+ L K + LV++M + + + T K+
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 308
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+AV E+M P + L++ L K + A L M RG + Y++L
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVL 368
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+ G ++ + R+M + +P++V Y +L++ C+ K +EA + M
Sbjct: 369 ISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGC 428
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
+P+ + +S+L+ G +EA++ +++ G + Y+ ++ C R+ +A
Sbjct: 429 LPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMM 488
Query: 352 VVDEMKQCGVGPNSRTYDIILQ 373
V +M G+ P++ Y I++
Sbjct: 489 VWSKMLTIGIKPDTVAYSSIIK 510
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 24/202 (11%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+EAV+ +++M+K G ++ L+D LC V++A ++ KM G+ PD +Y+ +
Sbjct: 449 EEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSI 508
Query: 232 LEGWSQQQNLLRVNEVCREMKCE---CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
++G ++ ++ EM C+ +PDVVTY IL++ C K AV + M +
Sbjct: 509 IKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLD 568
Query: 289 KNMMPSPHIFSTLINGLGSD---------------------KRLDEALEFYEKFKANGFA 327
+ P +T +N L +R+ A E A
Sbjct: 569 RGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLA 628
Query: 328 PETPTYNAVVGAYCWSMRMDDA 349
P+T T+ +V C +++ A
Sbjct: 629 PKTSTWAMIVREICKPKKINAA 650
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 111/276 (40%), Gaps = 67/276 (24%)
Query: 59 ADKICKILSKSPNSTIDAALAD-LSVEVSPELVAEVLNKLSNAGVLALSFFH-------- 109
A+K CK PN + + L D L E P E+LN++ +G L ++ +
Sbjct: 389 AEKGCK-----PNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFF 443
Query: 110 -----------WAEKQK-GFKHSTESFHALIEAL---GKIRQFKVIWNLVEDMKQRKLLT 154
W E K G + + LI+ L G++++ ++W+ K+LT
Sbjct: 444 KTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWS--------KMLT 495
Query: 155 R----DTXXXXXXXXXX--XXKVKEAVETFEKM---EKYGLKPEVSDFNKLVDVLCKSKS 205
DT + A++ + +M E+ +P+V +N L+D LC K
Sbjct: 496 IGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKD 555
Query: 206 VEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN---------------LL---RVNEV 247
+ +A +L + M RG PD+ + L S++ N LL RV+
Sbjct: 556 ISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGA 615
Query: 248 C---REMKCECFEPDVVTYGILINAYCKAKKYDEAV 280
C M + P T+ +++ CK KK + A+
Sbjct: 616 CTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAI 651
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 142/339 (41%), Gaps = 55/339 (16%)
Query: 40 PQNLSGSLRIHTLIPHTPHADKICKILSKSPNSTIDAALADLSVE--VSPELV--AEVLN 95
P + + IH L H ++ + AL D V+ P+LV V+N
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAV--------------ALVDQMVQRGCQPDLVTYGTVVN 231
Query: 96 KLSNAGV--LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL 153
L G LALS EK GKI VI+N + D
Sbjct: 232 GLCKRGDIDLALSLLKKMEK------------------GKIEADVVIYNTIID------- 266
Query: 154 TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELF 213
+ +A+ F +M+ G++P+V ++ L+ LC A L
Sbjct: 267 ----------GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 214 DKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKA 273
M R + P++ +++ L++ + ++ L+ ++ EM +PD+ TY LIN +C
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 274 KKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTY 333
+ DEA + M K+ P+ +STLI G KR++E +E + + G T TY
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 334 NAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
++ + + D+A V +M GV PN TY+I+L
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 475
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 106/205 (51%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ EA FE M P V ++ L+ CK+K VE+ ELF +M RGLV + +YT
Sbjct: 378 RLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYT 437
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G+ Q ++ V ++M P+++TY IL++ CK K +A+ + +Q
Sbjct: 438 TLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS 497
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
M P + ++ +I G+ ++++ E + G +P YN ++ +C ++A
Sbjct: 498 TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEA 557
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQP 374
++ +MK+ G PNS TY+ +++
Sbjct: 558 DSLLKKMKEDGPLPNSGTYNTLIRA 582
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 100/203 (49%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV +AV+ F M K P + +FNKL+ + K E L ++M+ G+ DL +Y+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
I + + ++ L V +M +EPD+VT L+N YC +K+ +AV +M E
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P F+TLI+GL + EA+ ++ G P+ TY VV C +D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
++ +M++ + + Y+ I+
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTII 265
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 101/202 (50%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V+E +E F +M + GL + L+ +++ + AQ +F +M G+ P++ +Y
Sbjct: 413 RVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 472
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
ILL+G + L + V ++ EPD+ TY I+I CKA K ++ + + K
Sbjct: 473 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK 532
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ ++T+I+G +EA +K K +G P + TYN ++ A + +
Sbjct: 533 GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREAS 592
Query: 350 YRVVDEMKQCGVGPNSRTYDII 371
++ EM+ CG ++ T ++
Sbjct: 593 AELIKEMRSCGFAGDASTIGLV 614
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 101/204 (49%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K EAV ++M + G +P++ + +V+ LCK ++ A L KM + D+ Y
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYN 262
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+++G + +++ + EM + PDV TY LI+ C ++ +A +M E+
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER 322
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ FS LI+ + +L EA + Y++ P+ TY++++ +C R+D+A
Sbjct: 323 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 382
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
+ + M PN TY +++
Sbjct: 383 KHMFELMISKDCFPNVVTYSTLIK 406
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 98/199 (49%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ +AV ++M + G KP+ F L+ L +A L D+M RG PDL +Y
Sbjct: 168 RISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 227
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ G ++ ++ + ++M+ E DVV Y +I+ CK K D+A+ + EM K
Sbjct: 228 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK 287
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P +S+LI+ L + R +A P T++A++ A+ ++ +A
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Query: 350 YRVVDEMKQCGVGPNSRTY 368
++ DEM + + P+ TY
Sbjct: 348 EKLYDEMIKRSIDPDIFTY 366
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 123/260 (47%), Gaps = 1/260 (0%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKE 173
Q+G + ++ A++ L K + NL+ M+ K+ + ++
Sbjct: 211 QRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 270
Query: 174 -AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
A+ F +ME G++P V ++ L+ LC A L M R + P+L +++ L+
Sbjct: 271 DALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALI 330
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ + ++ L++ ++ EM +P++ TY LIN +C + EA M K+ +
Sbjct: 331 DAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCL 390
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ ++TLING KR+D+ +E + + G T TY ++ + + D+A V
Sbjct: 391 PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 450
Query: 353 VDEMKQCGVGPNSRTYDIIL 372
+M GV PN TY+I+L
Sbjct: 451 FKQMVSVGVHPNILTYNILL 470
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 160/342 (46%), Gaps = 24/342 (7%)
Query: 40 PQNLSGSLRIHTLIPHTPHADKICKILSKSPNSTIDAALADLSVE--VSPELV--AEVLN 95
P ++ + IH L H ++ + AL D V+ P+LV V+N
Sbjct: 181 PDTVTFTTLIHGLFLHNKASEAV--------------ALIDRMVQRGCQPDLVTYGAVVN 226
Query: 96 KLSNAGV--LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL 153
L G LAL+ + E K + + + +I++L K R NL +M+ + +
Sbjct: 227 GLCKRGDTDLALNLLNKMEAAK-IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 154 -TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQEL 212
T + +A M + + P + F+ L+D K + KA++L
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345
Query: 213 FDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREM-KCECFEPDVVTYGILINAYC 271
+++M R + P++ +Y+ L+ G+ L ++ M + +C P+VVTY LIN +C
Sbjct: 346 YEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCL-PNVVTYNTLINGFC 404
Query: 272 KAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETP 331
KAK+ D+ + + EM ++ ++ + ++TLI+G + D A +++ + G P
Sbjct: 405 KAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 464
Query: 332 TYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
TYN ++ C + ++ A V + +++ + P+ TY+I+++
Sbjct: 465 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 506
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 98/199 (49%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ +AV ++M + G KP+ F L+ L +A L D+M RG PDL +Y
Sbjct: 163 RISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYG 222
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ G ++ + + +M+ E +VV Y +I++ CK + D+A+ + EM+ K
Sbjct: 223 AVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 282
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ +S+LI+ L + R +A P T++A++ A+ ++ A
Sbjct: 283 GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKA 342
Query: 350 YRVVDEMKQCGVGPNSRTY 368
++ +EM + + PN TY
Sbjct: 343 EKLYEEMIKRSIDPNIFTY 361
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 1/184 (0%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKM 181
+F ALI+A K + L E+M +R + T ++ EA + E M
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
+ P V +N L++ CK+K V+K ELF +M RGLV + +YT L+ G+ Q ++
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 444
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
V ++M P+++TY IL++ CK K +A+ + +Q M P + ++ +
Sbjct: 445 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 504
Query: 302 INGL 305
I G+
Sbjct: 505 IEGM 508
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 125/260 (48%), Gaps = 8/260 (3%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXX 162
AL+ F E KG + + ++ +LI L ++ L+ DM +RK+ T
Sbjct: 272 ALNLFTEME-NKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALI 330
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
K+ +A + +E+M K + P + ++ L++ C + +A+++ + M + +
Sbjct: 331 DAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCL 390
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
P++ +Y L+ G+ + + + + E+ REM + VTY LI+ + +A+ D A
Sbjct: 391 PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 450
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC- 341
+ +M + P+ ++ L++GL + +L +A+ +E + + P+ TYN ++ C
Sbjct: 451 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Query: 342 ---WSMRMDDAYRVVDEMKQ 358
W +M Y V +K+
Sbjct: 511 AGKW--KMGGIYFVASALKE 528
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 93/203 (45%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ +A+ F M + P + +F+KL+ + K + +KM G+ +L +Y
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL+ + + L + +M +EPD+VT L+N +C + +AV +M E
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P F+TLI+GL + EA+ ++ G P+ TY AVV C D A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
++++M+ + N Y ++
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVI 260
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 81/190 (42%)
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
EKME G+ + +N L++ C+ + A L KM G PD+ + LL G+
Sbjct: 102 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHG 161
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
+ + +M ++PD VT+ LI+ K EAV M ++ P +
Sbjct: 162 NRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTY 221
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
++NGL D AL K +A Y+ V+ + C DDA + EM+
Sbjct: 222 GAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 281
Query: 359 CGVGPNSRTY 368
GV PN TY
Sbjct: 282 KGVRPNVITY 291
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 73/168 (43%)
Query: 206 VEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGI 265
++ A LF M P + ++ LL ++ V +M+ ++ TY I
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 266 LINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANG 325
LIN +C+ + A+ +M + P ++L+NG R+ +A+ ++ G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 326 FAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+ P+T T+ ++ + +A ++D M Q G P+ TY ++
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVN 226
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 137/280 (48%), Gaps = 9/280 (3%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL----LTRDTXXXXXXXXXXXXK 170
+G S S+ ALI A G+ +++ L++ MK K+ LT +T
Sbjct: 170 QGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGL--D 227
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ + F +M G++P++ +N L+ ++A+ +F M G+VPDL +Y+
Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH 287
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+E + + + L +V ++ EM PD+ +Y +L+ AY K+ EA+G +H+MQ
Sbjct: 288 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG 347
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P+ + +S L+N G R D+ + + + K++ P+ TYN ++ + +
Sbjct: 348 CTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVV 407
Query: 351 RVVDEMKQCGVGPNSRTYD-IILQPDKGS--KNPRSLLGF 387
+ +M + + P+ TY+ II KG ++ R +L +
Sbjct: 408 TLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQY 447
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 100/203 (49%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++++ + +M G P+++ +N L++ KS S+++A +F +M+ G P+ +Y+
Sbjct: 297 RLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYS 356
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+LL + Q V ++ EMK +PD TY ILI + + + E V +H+M E+
Sbjct: 357 VLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEE 416
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
N+ P + +I G ++A + + AN P + Y V+ A+ + ++A
Sbjct: 417 NIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEA 476
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
+ M + G P+ T+ +L
Sbjct: 477 LVAFNTMHEVGSNPSIETFHSLL 499
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 96/201 (47%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA F M G+ P+++ ++ LV+ K + +EK +L +M G +PD+ SY +LL
Sbjct: 265 EAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLL 324
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
E +++ ++ V +M+ P+ TY +L+N + ++ +YD+ + EM+ N
Sbjct: 325 EAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTD 384
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P ++ LI G E + + P+ TY ++ A +DA ++
Sbjct: 385 PDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKI 444
Query: 353 VDEMKQCGVGPNSRTYDIILQ 373
+ M + P+S+ Y +++
Sbjct: 445 LQYMTANDIVPSSKAYTGVIE 465
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 102/206 (49%), Gaps = 7/206 (3%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ + +E F++M G+ V + L++ ++ E + EL D+M++ + P + +Y
Sbjct: 157 LDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNT 216
Query: 231 LL----EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
++ G + LL + EM+ E +PD+VTY L++A DEA + M
Sbjct: 217 VINACARGGLDWEGLL---GLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTM 273
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRM 346
+ ++P +S L+ G +RL++ + + + G P+ +YN ++ AY S +
Sbjct: 274 NDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSI 333
Query: 347 DDAYRVVDEMKQCGVGPNSRTYDIIL 372
+A V +M+ G PN+ TY ++L
Sbjct: 334 KEAMGVFHQMQAAGCTPNANTYSVLL 359
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 117/255 (45%), Gaps = 1/255 (0%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXX-XXXXKVKEAVETFEKM 181
++ L+E GK+R+ + + +L+ +M L T +KEA+ F +M
Sbjct: 284 TYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 343
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
+ G P + ++ L+++ +S + ++LF +M+ PD +Y IL+E + +
Sbjct: 344 QAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYF 403
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
V + +M E EPD+ TY +I A K +++A M +++PS ++ +
Sbjct: 404 KEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGV 463
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
I G +EAL + G P T+++++ ++ + ++ ++ + G+
Sbjct: 464 IEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGI 523
Query: 362 GPNSRTYDIILQPDK 376
N T++ ++ K
Sbjct: 524 PRNRDTFNAQIEAYK 538
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 95/201 (47%), Gaps = 1/201 (0%)
Query: 187 KPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNE 246
KP + ++ +L + ++K E+FD+M +G+ + SYT L+ + + E
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 247 VCREMKCECFEPDVVTYGILINAYCKAK-KYDEAVGFYHEMQEKNMMPSPHIFSTLINGL 305
+ MK E P ++TY +INA + ++ +G + EM+ + + P ++TL++
Sbjct: 198 LLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSAC 257
Query: 306 GSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNS 365
DEA + G P+ TY+ +V + R++ ++ EM G P+
Sbjct: 258 AIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDI 317
Query: 366 RTYDIILQPDKGSKNPRSLLG 386
+Y+++L+ S + + +G
Sbjct: 318 TSYNVLLEAYAKSGSIKEAMG 338
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 89/206 (43%), Gaps = 9/206 (4%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+EA+ F M + G P + F+ L+ + V++++ + ++ G+ + ++
Sbjct: 474 EEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQ 533
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+E + Q + +M+ +PD T +++ Y A+ DE + EM+ ++
Sbjct: 534 IEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDI 593
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY- 350
+PS + ++ G +R D+ E E+ +N + V+G DD+
Sbjct: 594 LPSIMCYCMMLAVYGKTERWDDVNELLEEMLSN----RVSNIHQVIGQMIKGDYDDDSNW 649
Query: 351 ----RVVDEMKQCGVGPNSRTYDIIL 372
V+D++ G G R Y+ +L
Sbjct: 650 QIVEYVLDKLNSEGCGLGIRFYNALL 675
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 104/248 (41%), Gaps = 6/248 (2%)
Query: 120 STESFHALIEALGKIRQFK---VIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVE 176
S++++ +IEA G+ ++ V +N + ++ + +T VKE+
Sbjct: 456 SSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSI--ETFHSLLYSFARGGLVKESEA 513
Query: 177 TFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWS 236
++ G+ FN ++ + E+A + + M PD ++ +L +S
Sbjct: 514 ILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYS 573
Query: 237 QQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPH 296
+ + E EMK P ++ Y +++ Y K +++D+ EM +
Sbjct: 574 FARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQ 633
Query: 297 IFSTLINGLGSDKRLDEALEF-YEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDE 355
+ +I G D + +E+ +K + G YNA++ A W + + A RV++E
Sbjct: 634 VIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNE 693
Query: 356 MKQCGVGP 363
+ G+ P
Sbjct: 694 ATKRGLFP 701
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 142/281 (50%), Gaps = 1/281 (0%)
Query: 93 VLNKLSNAGVLALSFFHWAEK-QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRK 151
++N + L LS ++ E GF + F+ L+ + F W+ + K +
Sbjct: 100 IINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKV 159
Query: 152 LLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQE 211
+L + +++++ + ++ ++G P V + L+D CK +EKA++
Sbjct: 160 VLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKD 219
Query: 212 LFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYC 271
LF +M GLV + ++YT+L+ G + + E+ +M+ + P++ TY ++N C
Sbjct: 220 LFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLC 279
Query: 272 KAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETP 331
K + +A + EM+E+ + + ++TLI GL + +L+EA + ++ K++G P
Sbjct: 280 KDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLI 339
Query: 332 TYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
TYN ++ +C ++ A + ++K G+ P+ TY+I++
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILV 380
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 107/203 (52%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ K+A + F++M + G+ + +N L+ LC+ + +A ++ D+M+ G+ P+L +Y
Sbjct: 283 RTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYN 342
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L++G+ L + +CR++K P +VTY IL++ +C+ A EM+E+
Sbjct: 343 TLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEER 402
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ PS ++ LI+ +++A++ + G P+ TY+ ++ +C +M++A
Sbjct: 403 GIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEA 462
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
R+ M + PN Y+ ++
Sbjct: 463 SRLFKSMVEKNCEPNEVIYNTMI 485
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 113/216 (52%), Gaps = 2/216 (0%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
K+ E +EKM++ G+ P + +N +++ LCK + A ++FD+MR RG+ ++ +Y L
Sbjct: 250 KQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTL 309
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+ G ++ L N+V +MK + P+++TY LI+ +C K +A+ +++ + +
Sbjct: 310 IGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGL 369
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
PS ++ L++G A + ++ + G P TY ++ + S M+ A +
Sbjct: 370 SPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ 429
Query: 352 VVDEMKQCGVGPNSRTYDIILQP--DKGSKNPRSLL 385
+ M++ G+ P+ TY +++ KG N S L
Sbjct: 430 LRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 152/327 (46%), Gaps = 8/327 (2%)
Query: 52 LIPHTPHADKICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWA 111
++ +T D CK + + L + + ++N L GV F +
Sbjct: 198 VVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYE 257
Query: 112 EKQK-GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR----KLLTRDTXXXXXXXXX 166
+ Q+ G + +++ ++ L K + K + + ++M++R ++T +T
Sbjct: 258 KMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREM 317
Query: 167 XXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLK 226
K+ EA + ++M+ G+ P + +N L+D C + KA L ++ RGL P L
Sbjct: 318 ---KLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLV 374
Query: 227 SYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
+Y IL+ G+ ++ + ++ +EM+ +P VTY ILI+ + ++ ++A+ M
Sbjct: 375 TYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSM 434
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRM 346
+E ++P H +S LI+G +++EA ++ P YN ++ YC
Sbjct: 435 EELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSS 494
Query: 347 DDAYRVVDEMKQCGVGPNSRTYDIILQ 373
A +++ EM++ + PN +Y +++
Sbjct: 495 YRALKLLKEMEEKELAPNVASYRYMIE 521
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 135/284 (47%), Gaps = 8/284 (2%)
Query: 93 VLNKLSNAGVLALSFFHWAE-KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR- 150
V+N+L G +F + E +++G + +++ LI L + + +V+ MK
Sbjct: 274 VMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDG 333
Query: 151 ---KLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVE 207
L+T +T K+ +A+ ++ GL P + +N LV C+
Sbjct: 334 INPNLITYNTLIDGFCGVG---KLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTS 390
Query: 208 KAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILI 267
A ++ +M RG+ P +YTIL++ +++ N+ + ++ M+ PDV TY +LI
Sbjct: 391 GAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI 450
Query: 268 NAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFA 327
+ +C + +EA + M EKN P+ I++T+I G + AL+ ++ + A
Sbjct: 451 HGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELA 510
Query: 328 PETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDII 371
P +Y ++ C + +A R+V++M G+ P++ +I
Sbjct: 511 PNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 98/187 (52%)
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
M K GL+P V FN L+ C++ +++A ++F +M+ + P+ +Y L+ G+SQQ +
Sbjct: 299 MGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGD 358
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
+M C + D++TY LI CK K +A F E+ ++N++P+ FS
Sbjct: 359 HEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSA 418
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
LI G K D E Y+ +G P T+N +V A+C + D A +V+ EM +
Sbjct: 419 LIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRS 478
Query: 361 VGPNSRT 367
+ +SRT
Sbjct: 479 IPLDSRT 485
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 146/357 (40%), Gaps = 54/357 (15%)
Query: 78 LADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQF 137
L LS + V VL K+ +L+L FF+WA+ + HS E+ ++ L K R+F
Sbjct: 72 LNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKF 131
Query: 138 KVIWNLVEDMKQRKLL-------------------TRDTXXXXXXXXXXXXKVKEAVETF 178
K +++ D+ + T K + A +TF
Sbjct: 132 KSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTF 191
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
+M+ YG P V N + L V+ A + +MR + P+ + +++ G+ +
Sbjct: 192 MQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRS 251
Query: 239 QNLLRVNEVCREMK------------------CE-----------------CFEPDVVTY 263
L + E+ ++M+ CE +P+VVT+
Sbjct: 252 GKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTF 311
Query: 264 GILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKA 323
LI+ +C+A K EA + EM+ N+ P+ ++TLING + A FYE
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVC 371
Query: 324 NGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQPDKGSKN 380
NG + TYNA++ C + A + V E+ + + PNS T+ ++ KN
Sbjct: 372 NGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKN 428
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A +E M G++ ++ +N L+ LCK KA + ++ LVP+ +++ L+
Sbjct: 362 AFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIM 421
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G ++N R E+ + M P+ T+ +L++A+C+ + +D A EM +++
Sbjct: 422 GQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPL 481
Query: 294 SPHIFSTLINGL---GSDKRLDEALE 316
+ NGL G D+ + + L+
Sbjct: 482 DSRTVHQVCNGLKHQGKDQLVKKLLQ 507
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 98/187 (52%)
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
M K GL+P V FN L+ C++ +++A ++F +M+ + P+ +Y L+ G+SQQ +
Sbjct: 299 MGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGD 358
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
+M C + D++TY LI CK K +A F E+ ++N++P+ FS
Sbjct: 359 HEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSA 418
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
LI G K D E Y+ +G P T+N +V A+C + D A +V+ EM +
Sbjct: 419 LIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRS 478
Query: 361 VGPNSRT 367
+ +SRT
Sbjct: 479 IPLDSRT 485
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 146/357 (40%), Gaps = 54/357 (15%)
Query: 78 LADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQF 137
L LS + V VL K+ +L+L FF+WA+ + HS E+ ++ L K R+F
Sbjct: 72 LNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKF 131
Query: 138 KVIWNLVEDMKQRKLL-------------------TRDTXXXXXXXXXXXXKVKEAVETF 178
K +++ D+ + T K + A +TF
Sbjct: 132 KSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTF 191
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
+M+ YG P V N + L V+ A + +MR + P+ + +++ G+ +
Sbjct: 192 MQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRS 251
Query: 239 QNLLRVNEVCREMK------------------CE-----------------CFEPDVVTY 263
L + E+ ++M+ CE +P+VVT+
Sbjct: 252 GKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTF 311
Query: 264 GILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKA 323
LI+ +C+A K EA + EM+ N+ P+ ++TLING + A FYE
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVC 371
Query: 324 NGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQPDKGSKN 380
NG + TYNA++ C + A + V E+ + + PNS T+ ++ KN
Sbjct: 372 NGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKN 428
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A +E M G++ ++ +N L+ LCK KA + ++ LVP+ +++ L+
Sbjct: 362 AFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIM 421
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G ++N R E+ + M P+ T+ +L++A+C+ + +D A EM +++
Sbjct: 422 GQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPL 481
Query: 294 SPHIFSTLINGL---GSDKRLDEALE 316
+ NGL G D+ + + L+
Sbjct: 482 DSRTVHQVCNGLKHQGKDQLVKKLLQ 507
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 101/202 (50%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V +A+ F +M+ G++P V +N L+ LC A L M R + P++ +++
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++ + ++ L+ ++ EM +PD+ TY LIN +C + DEA + M K+
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P+ ++TLI G KR+DE +E + + G T TY ++ + + D+A
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
Query: 351 RVVDEMKQCGVGPNSRTYDIIL 372
V +M GV P+ TY I+L
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILL 473
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 125/272 (45%), Gaps = 2/272 (0%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXX 162
A++ F K + F E F L+ A+ K+ +F ++ +L E M+ + T
Sbjct: 65 AVNLFGDMVKSRPFPSIVE-FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
++ A+ KM K G +P++ N L++ C + A L +M G
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
PD ++ L+ G + + M + +PD+VTYGI++N CK D A+
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
+M++ + P I++T+I+ L + K +++AL + + G P TYN+++ C
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIILQP 374
R DA R++ +M + + PN T+ ++
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFSALIDA 335
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 103/205 (50%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ EA FE M P V +N L+ CK+K V++ ELF +M RGLV + +YT
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G+ Q + V ++M + PD++TY IL++ C K + A+ + +Q
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
M P + ++ +I G+ ++++ + + G P TY ++ +C ++A
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 555
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQP 374
+ EMK+ G P+S TY+ +++
Sbjct: 556 DALFREMKEEGPLPDSGTYNTLIRA 580
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 158/342 (46%), Gaps = 24/342 (7%)
Query: 40 PQNLSGSLRIHTLIPHTPHADKICKILSKSPNSTIDAALADLSV--EVSPELVAE--VLN 95
P + + + IH L H ++ + AL D V P+LV V+N
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAV--------------ALVDRMVVKGCQPDLVTYGIVVN 229
Query: 96 KLSNAGV--LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL 153
L G LALS E+ K + ++ +I+AL + NL +M + +
Sbjct: 230 GLCKRGDIDLALSLLKKMEQGK-IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Query: 154 -TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQEL 212
T + +A M + + P V F+ L+D K + +A++L
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 213 FDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKC-ECFEPDVVTYGILINAYC 271
+D+M R + PD+ +Y+ L+ G+ L + M +CF P+VVTY LI +C
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLIKGFC 407
Query: 272 KAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETP 331
KAK+ DE + + EM ++ ++ + ++TLI+G + D A +++ ++G P+
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIM 467
Query: 332 TYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
TY+ ++ C + +++ A V + +++ + P+ TY+I+++
Sbjct: 468 TYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIE 509
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ +AV F M K P + +F+KL+ + K + L ++M++ G+ +L +Y+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL+ + ++ L V +M +EPD+VT L+N +C + +AV +M E
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P F+TLI+GL R EA+ ++ G P+ TY VV C +D A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQPDKGSKNPRSLL 385
++ +M+Q + P Y+ I+ KN L
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDAL 276
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 99/202 (49%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V E +E F +M + GL + L+ +++ + AQ +F +M G++PD+ +Y+
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYS 470
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
ILL+G + V ++ EPD+ TY I+I CKA K ++ + + K
Sbjct: 471 ILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 530
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ ++T+++G +EA + + K G P++ TYN ++ A+ +
Sbjct: 531 GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAAS 590
Query: 350 YRVVDEMKQCGVGPNSRTYDII 371
++ EM+ C ++ T ++
Sbjct: 591 AELIREMRSCRFVGDASTIGLV 612
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 100/199 (50%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ +AV +M + G +P+ FN L+ L + +A L D+M +G PDL +Y
Sbjct: 166 RISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYG 225
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
I++ G ++ ++ + ++M+ EP VV Y +I+A C K ++A+ + EM K
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ +++LI L + R +A P T++A++ A+ ++ +A
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 345
Query: 350 YRVVDEMKQCGVGPNSRTY 368
++ DEM + + P+ TY
Sbjct: 346 EKLYDEMIKRSIDPDIFTY 364
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV+ A+ FE +++ ++P++ +N +++ +CK+ VE +LF + +G+ P++ +YT
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 540
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ G+ ++ + + REMK E PD TY LI A+ + + EM+
Sbjct: 541 TMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSC 600
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEAL 315
+ + N L D RLD++
Sbjct: 601 RFVGDASTIGLVTNML-HDGRLDKSF 625
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 4/260 (1%)
Query: 110 WAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXX 168
+ K+KGF TE+ + ++ L ++ + + W DM + ++ + T
Sbjct: 179 YLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKE 238
Query: 169 XKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
K+K+A ME +G+KP + +N LV +E A+ + +M+ +G PD+++Y
Sbjct: 239 GKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTY 298
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
+L W + R +EV REMK PD V+Y ILI + A + EM +
Sbjct: 299 NPIL-SWMCNEG--RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVK 355
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
+ M+P+ + ++TLI+GL + +++ A + + G ++ TYN ++ YC
Sbjct: 356 QGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKK 415
Query: 349 AYRVVDEMKQCGVGPNSRTY 368
A+ + DEM G+ P TY
Sbjct: 416 AFALHDEMMTDGIQPTQFTY 435
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 3/216 (1%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A E +M++ GL P+ +N L+ + +E A D+M +G+VP +Y L+
Sbjct: 311 ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIH 370
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G + + + RE++ + D VTY ILIN YC+ +A + EM + P
Sbjct: 371 GLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQP 430
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ +++LI L + EA E +EK G P+ N ++ +C MD A+ ++
Sbjct: 431 TQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLL 490
Query: 354 DEMKQCGVGPNSRTYDIILQPDKGS---KNPRSLLG 386
EM + P+ TY+ +++ G + R L+G
Sbjct: 491 KEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMG 526
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 128/278 (46%), Gaps = 2/278 (0%)
Query: 98 SNAGVLALSFFHWAEKQK-GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTR 155
SN G L ++F + E K G + +++ LI L + + L+ +++++ + L
Sbjct: 338 SNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 397
Query: 156 DTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDK 215
T K+A ++M G++P + L+ VLC+ +A ELF+K
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457
Query: 216 MRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKK 275
+ +G+ PDL L++G N+ R + +EM PD VTY L+ C K
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGK 517
Query: 276 YDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNA 335
++EA EM+ + + P ++TLI+G A ++ + GF P TYNA
Sbjct: 518 FEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNA 577
Query: 336 VVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
++ + + A ++ EMK G+ PN ++ +++
Sbjct: 578 LLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIE 615
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K +EA E FEK+ G+KP++ N L+D C ++++A L +M + PD +Y
Sbjct: 447 KTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYN 506
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G + E+ EMK +PD ++Y LI+ Y K A EM
Sbjct: 507 CLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSL 566
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
P+ ++ L+ GL ++ + A E + K+ G P ++ +V+ A
Sbjct: 567 GFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 93/203 (45%), Gaps = 3/203 (1%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V EA+E F M++ G P+ N ++ +L + +E A + M + ++ ++ I
Sbjct: 171 VDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNI 230
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++ ++ L + M+ +P +VTY L+ + + + A EM+ K
Sbjct: 231 MINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKG 290
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P ++ +++ + ++ R E L + K G P++ +YN ++ + ++ A+
Sbjct: 291 FQPDMQTYNPILSWMCNEGRASEVL---REMKEIGLVPDSVSYNILIRGCSNNGDLEMAF 347
Query: 351 RVVDEMKQCGVGPNSRTYDIILQ 373
DEM + G+ P TY+ ++
Sbjct: 348 AYRDEMVKQGMVPTFYTYNTLIH 370
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 68/134 (50%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A ++M+ + P+ +N L+ LC E+A+EL +M+ RG+ PD SY L+
Sbjct: 486 AFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLIS 545
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+S++ + V EM F P ++TY L+ K ++ + A EM+ + ++P
Sbjct: 546 GYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVP 605
Query: 294 SPHIFSTLINGLGS 307
+ F ++I + +
Sbjct: 606 NDSSFCSVIEAMSN 619
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 138/302 (45%), Gaps = 19/302 (6%)
Query: 87 PELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKI-----------R 135
P L+ VLN + +A FF+W ++Q K S ++F A++E L + R
Sbjct: 85 PNLLIRVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAER 144
Query: 136 QFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVE----TFEKMEKYGLKPEVS 191
+ + ++D+ + K E +FEKM + G P V
Sbjct: 145 SIDLGMHEIDDLLIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPSVR 204
Query: 192 DFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREM 251
+ N ++ VL S+ + KA +++ M G++P + ++ +L+ + +L RV+++ EM
Sbjct: 205 NCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEM 264
Query: 252 KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRL 311
K E VTY ILIN + K K +EA F+ +M+ +P+ F+ LI G
Sbjct: 265 KRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLF 324
Query: 312 DEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDII 371
D+A ++ G P T TYN + A C R+DDA ++ M P+ +Y+ +
Sbjct: 325 DDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTL 380
Query: 372 LQ 373
+
Sbjct: 381 MH 382
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 102/205 (49%), Gaps = 5/205 (2%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM---RHRGLVPDLKSYTI 230
A E +++M + G+KP+ + + +KA L ++M H PDL Y +
Sbjct: 463 ATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHA--PDLTIYNV 520
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++G + NL++ E R++ PD VTY +I Y + ++ A Y EM K
Sbjct: 521 RIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKR 580
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ PS + LI G RL++A ++ + K G P T+NA++ C + +D+AY
Sbjct: 581 LYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAY 640
Query: 351 RVVDEMKQCGVGPNSRTYDIILQPD 375
R + +M++ G+ PN +Y +++ +
Sbjct: 641 RYLCKMEEEGIPPNKYSYTMLISKN 665
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 111/268 (41%), Gaps = 6/268 (2%)
Query: 108 FHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXX 166
FH ++ GF + SF+ LIE K F W + ++M + T T
Sbjct: 295 FHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALC 354
Query: 167 XXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLK 226
++ +A E M P+V +N L+ K +A LFD +R + P +
Sbjct: 355 DFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIV 410
Query: 227 SYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
+Y L++G + NL + EM + PDV+TY L+ + K A Y EM
Sbjct: 411 TYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEM 470
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKA-NGFAPETPTYNAVVGAYCWSMR 345
K + P + ++T G D+A +E+ A + AP+ YN + C
Sbjct: 471 LRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGN 530
Query: 346 MDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+ A ++ + G+ P+ TY +++
Sbjct: 531 LVKAIEFQRKIFRVGLVPDHVTYTTVIR 558
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 115/256 (44%), Gaps = 5/256 (1%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVK 172
+ G + +F+ ++++ K + + + +MK+R + + T K++
Sbjct: 231 EHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKME 290
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA M + G FN L++ CK + A + D+M + G+ P +Y I +
Sbjct: 291 EARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYI 350
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ R+++ RE+ PDVV+Y L++ Y K K+ EA + +++ ++
Sbjct: 351 CALC---DFGRIDD-ARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIH 406
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
PS ++TLI+GL L+ A E+ P+ TY +V + + + A V
Sbjct: 407 PSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEV 466
Query: 353 VDEMKQCGVGPNSRTY 368
DEM + G+ P+ Y
Sbjct: 467 YDEMLRKGIKPDGYAY 482
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 92/186 (49%)
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEV 247
P+++ +N +D LCK ++ KA E K+ GLVPD +YT ++ G+ + +
Sbjct: 513 PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNL 572
Query: 248 CREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGS 307
EM + P V+TY +LI + KA + ++A + EM+++ + P+ + L+ G+
Sbjct: 573 YDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCK 632
Query: 308 DKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
+DEA + K + G P +Y ++ C + ++ ++ EM + P+ T
Sbjct: 633 AGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYT 692
Query: 368 YDIILQ 373
+ + +
Sbjct: 693 HRALFK 698
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 86/164 (52%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+A+E K+ + GL P+ + ++ ++ + A+ L+D+M + L P + +Y +L+
Sbjct: 533 KAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLI 592
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G ++ L + + EMK P+V+T+ L+ CKA DEA + +M+E+ +
Sbjct: 593 YGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIP 652
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAV 336
P+ + ++ LI+ ++ +E ++ Y++ P+ T+ A+
Sbjct: 653 PNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRAL 696
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ K A +++M + L P V + L+ K+ +E+A + +M+ RG+ P++ ++
Sbjct: 565 QFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHN 624
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
LL G + N+ +M+ E P+ +Y +LI+ C +K++E V Y EM +K
Sbjct: 625 ALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDK 684
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKF 321
+ P + L L D E +EF E+
Sbjct: 685 EIEPDGYTHRALFKHLEKDHESRE-VEFLERL 715
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 130/262 (49%), Gaps = 7/262 (2%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL----LTRDTXXXXXXXXXXXXKV 171
G+K + ++ +I+ L K +Q +L+ M++ + +T ++
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
V K E Y P+V FN L+D K V +A+E +++M R L PD+ +Y++L
Sbjct: 241 TRMVSCMTKREIY---PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+ G L E+ M + PDVVTY ILIN YCK+KK + + + EM ++ +
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
+ + ++ LI G +L+ A E + + G P TYN ++ C + +++ A
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALV 417
Query: 352 VVDEMKQCGVGPNSRTYDIILQ 373
++ +M++ G+ + TY+II++
Sbjct: 418 ILADMQKNGMDADIVTYNIIIR 439
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 110/239 (46%), Gaps = 35/239 (14%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V +A+ F++M G KP V +N ++D LCKSK V+ A +L ++M G+ PD+ +Y
Sbjct: 166 RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 230 ILLEG------WSQQQNLL--------------------------RVNEV---CREMKCE 254
L+ G WS ++ RV+E EM
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR 285
Query: 255 CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEA 314
+PD+VTY +LI C + DEA + M K P +S LING K+++
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345
Query: 315 LEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
++ + + G T TY ++ YC + +++ A + M CGV PN TY+++L
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH 404
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 125/274 (45%), Gaps = 3/274 (1%)
Query: 107 FFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXX 165
FFH + + S F L+ A+ K++++ V+ L E M+ + T
Sbjct: 69 FFHMVQCRP--LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126
Query: 166 XXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDL 225
++ A+ KM K G +P + F L++ C+ V A +FD+M G P++
Sbjct: 127 CRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNV 186
Query: 226 KSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHE 285
Y +++G + + + ++ M+ + PDVVTY LI+ C + ++ +A
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSC 246
Query: 286 MQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMR 345
M ++ + P F+ LI+ + R+ EA EFYE+ P+ TY+ ++ C R
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR 306
Query: 346 MDDAYRVVDEMKQCGVGPNSRTYDIILQPDKGSK 379
+D+A + M G P+ TY I++ SK
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSK 340
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 130/270 (48%), Gaps = 2/270 (0%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXX 162
AL + EK G ++++LI L ++ +V M +R++ T
Sbjct: 205 ALDLLNRMEKD-GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALI 263
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
+V EA E +E+M + L P++ ++ L+ LC +++A+E+F M +G
Sbjct: 264 DACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF 323
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
PD+ +Y+IL+ G+ + + + ++ EM + VTY ILI YC+A K + A
Sbjct: 324 PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEI 383
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
+ M + P+ ++ L++GL + ++++AL + NG + TYN ++ C
Sbjct: 384 FRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCK 443
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+ + DA+ + + G+ P+ TY ++
Sbjct: 444 AGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 134/326 (41%), Gaps = 61/326 (18%)
Query: 52 LIPHTPHADKICKILSKSPNSTIDAALADLSVEVSPELVA--EVLNKLSNAGVLALSFFH 109
++ + D +CK SK ++ +D + P++V +++ L ++G
Sbjct: 186 VVIYNTIIDGLCK--SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG-------R 236
Query: 110 WAEKQKGFKHSTE--------SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD----T 157
W++ + T+ +F+ALI+A K + E+M +R L D T
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL---DPDIVT 293
Query: 158 XXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMR 217
++ EA E F M G P+V ++ L++ CKSK VE +LF +M
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353
Query: 218 HRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK------------------CE----- 254
RG+V + +YTIL++G+ + L E+ R M C+
Sbjct: 354 QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIE 413
Query: 255 ------------CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLI 302
+ D+VTY I+I CKA + +A Y + + +MP ++T++
Sbjct: 414 KALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Query: 303 NGLGSDKRLDEALEFYEKFKANGFAP 328
GL EA + K K +G P
Sbjct: 474 LGLYKKGLRREADALFRKMKEDGILP 499
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 94/203 (46%), Gaps = 35/203 (17%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ ++++ F M + P ++DF++L+ + K +K Y
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISK----------------------MKKYD 98
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+++ W Q Q L + +C T IL+N +C+ + A+ F +M +
Sbjct: 99 VVIYLWEQMQMLGIPHNLC-------------TCNILLNCFCRCSQLSLALSFLGKMIKL 145
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
PS F +L+NG R+ +AL +++ G+ P YN ++ C S ++D+A
Sbjct: 146 GHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNA 205
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
+++ M++ G+GP+ TY+ ++
Sbjct: 206 LDLLNRMEKDGIGPDVVTYNSLI 228
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 101/241 (41%), Gaps = 17/241 (7%)
Query: 71 NSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHW----------AEKQKGFKHS 120
N+ IDA + + V + E E++ + + ++ S + AE+ GF S
Sbjct: 260 NALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVS 319
Query: 121 TESF------HALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKE 173
F LI K ++ + L +M QR ++ T K+
Sbjct: 320 KGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNV 379
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A E F +M G+ P + +N L+ LC + +EKA + M+ G+ D+ +Y I++
Sbjct: 380 AEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIR 439
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G + + ++ + C+ PD+ TY ++ K EA + +M+E ++P
Sbjct: 440 GMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499
Query: 294 S 294
+
Sbjct: 500 N 500
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 109/212 (51%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ +A+E ++M+ G+K ++ + L+D CK ++E A LF ++ GL P Y
Sbjct: 634 RMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYN 693
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G+ N++ ++ ++M + D+ TY LI+ K A Y EMQ
Sbjct: 694 SLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAV 753
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++P I++ ++NGL + + ++ +E+ K N P YNAV+ + +D+A
Sbjct: 754 GLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEA 813
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQPDKGSKNP 381
+R+ DEM G+ P+ T+DI++ G+ P
Sbjct: 814 FRLHDEMLDKGILPDGATFDILVSGQVGNLQP 845
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 99/193 (51%), Gaps = 1/193 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K EA E KME G+ P V +N ++ C+ K+++ A+ +F + +GL P+ +Y+
Sbjct: 458 KTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYS 517
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM-QE 288
IL++G + + EV M E + V Y +IN CK + +A M +E
Sbjct: 518 ILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEE 577
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
K + S ++++I+G + +D A+ YE+ NG +P TY +++ C + RMD
Sbjct: 578 KRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQ 637
Query: 349 AYRVVDEMKQCGV 361
A + DEMK GV
Sbjct: 638 ALEMRDEMKNKGV 650
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 92/194 (47%), Gaps = 1/194 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGL-VPDLKSY 228
K EA+E + + G +P+ ++ V CK+ + A L +M+ + L VP ++Y
Sbjct: 248 KPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETY 307
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
T ++ +Q N+ + EM + +VV LI +CK A+ + +M++
Sbjct: 308 TSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEK 367
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
+ P+ FS LI + +++ALEFY+K + G P + ++ + + ++
Sbjct: 368 EGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEE 427
Query: 349 AYRVVDEMKQCGVG 362
A ++ DE + G+
Sbjct: 428 ALKLFDESFETGLA 441
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 96/194 (49%), Gaps = 1/194 (0%)
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
E EK P + ++ K +++ A L D+M G+ ++ + T L+ G +
Sbjct: 293 EMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKN 352
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
+L+ + +M+ E P+ VT+ +LI + K + ++A+ FY +M+ + PS
Sbjct: 353 NDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHV 412
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
T+I G ++ +EAL+ +++ G A N ++ C + D+A ++ +M+
Sbjct: 413 HTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMES 471
Query: 359 CGVGPNSRTYDIIL 372
G+GPN +Y+ ++
Sbjct: 472 RGIGPNVVSYNNVM 485
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/333 (19%), Positives = 135/333 (40%), Gaps = 36/333 (10%)
Query: 65 ILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESF 124
+LS P DA++ D+ +LN+ +N AL F++WA +G + F
Sbjct: 62 LLSAKPEQKDDASVIDV-----------LLNRRNNPEA-ALRFYNWARPWRGSFEDGDVF 109
Query: 125 HALI-------EALGKIRQFKV---------------IWNLVEDMKQRKL-LTRDTXXXX 161
LI E G+ + + LV+ K +
Sbjct: 110 WVLIHILVSSPETYGRASDLLIRYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYL 169
Query: 162 XXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGL 221
+ AV+ +M + + P N+ + L + S+ +A+EL+ +M G+
Sbjct: 170 LNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGV 229
Query: 222 VPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVG 281
D + +L+ +++ EV EPD + Y + + A CK A
Sbjct: 230 DGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANS 289
Query: 282 FYHEMQEKNM-MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
EM+EK + +PS ++++I +D+A+ ++ ++G + +++ +
Sbjct: 290 LLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGH 349
Query: 341 CWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
C + + A + D+M++ G PNS T+ ++++
Sbjct: 350 CKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIE 382
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 123/284 (43%), Gaps = 5/284 (1%)
Query: 111 AEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTR-DTXXXXXXXXXXXX 169
+ K GF+ ++ +F+ L+ A K RQ ++V M + ++
Sbjct: 153 SAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRN 212
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ EA E + +M G+ + L+ + + +A E+ + RG PD Y+
Sbjct: 213 SLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYS 272
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCE--CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
+ ++ + +L N + REMK + C P TY +I A K D+A+ EM
Sbjct: 273 LAVQACCKTLDLAMANSLLREMKEKKLCV-PSQETYTSVILASVKQGNMDDAIRLKDEML 331
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
+ + ++LI G + L AL ++K + G +P + T++ ++ + + M+
Sbjct: 332 SDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEME 391
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILQP-DKGSKNPRSLLGFPEN 390
A +M+ G+ P+ I+Q KG K+ +L F E+
Sbjct: 392 KALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDES 435
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 122/262 (46%), Gaps = 2/262 (0%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXX 162
A+ F K + F E F L+ A+ K+ +F ++ +L E M+ + T
Sbjct: 59 AIGLFGDMVKSRPFPSIVE-FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
++ A+ KM K G P + N L++ C + +A L D+M G
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
PD ++T L+ G Q + M + +PD+VTYG +IN CK + D A+
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
++M++ + I++T+I+GL K +D+A + + K + G P+ TYN ++ C
Sbjct: 238 LNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCN 297
Query: 343 SMRMDDAYRVVDEMKQCGVGPN 364
R DA R++ +M + + P+
Sbjct: 298 YGRWSDASRLLSDMLEKNINPD 319
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 107/206 (51%), Gaps = 1/206 (0%)
Query: 170 KVKEAVETFEKMEKYG-LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
K+ EA + +++M K P+V +N L+ CK K VE+ E+F +M RGLV + +Y
Sbjct: 335 KLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 394
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
T L+ G+ Q ++ V ++M + PD++TY IL++ C + A+ + MQ+
Sbjct: 395 TTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQK 454
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
++M ++T+I L ++++ + + G P TY ++ +C ++
Sbjct: 455 RDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 514
Query: 349 AYRVVDEMKQCGVGPNSRTYDIILQP 374
A + EMK+ G PNS TY+ +++
Sbjct: 515 ADALFVEMKEDGPLPNSGTYNTLIRA 540
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 100/202 (49%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V+E +E F +M + GL + L+ +++ + AQ +F +M G+ PD+ +Y
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
ILL+G N+ V M+ + D+VTY +I A CKA K ++ + + K
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ ++T+++G +EA + + K +G P + TYN ++ A +
Sbjct: 491 GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAAS 550
Query: 350 YRVVDEMKQCGVGPNSRTYDII 371
++ EM+ CG ++ T+ ++
Sbjct: 551 AELIKEMRSCGFAGDASTFGLV 572
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 97/203 (47%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ +A+ F M K P + +F+KL+ + K + L ++M++ G+ +L +Y+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
I + + ++ L + +M + P +VT L+N +C + EAV +M E
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P F+TL++GL + EA+ E+ G P+ TY AV+ C D A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
++++M++ + + Y+ I+
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTII 257
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 82/191 (42%)
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
E+M+ G+ + ++ ++ C+ + A + KM G P + + LL G+
Sbjct: 99 EQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHG 158
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
+ + +M ++PD VT+ L++ + K EAV M K P +
Sbjct: 159 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 218
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
+INGL D AL K + + YN ++ C MDDA+ + ++M+
Sbjct: 219 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMET 278
Query: 359 CGVGPNSRTYD 369
G+ P+ TY+
Sbjct: 279 KGIKPDVFTYN 289
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 144/340 (42%), Gaps = 55/340 (16%)
Query: 40 PQNLSGSLRIHTLIPHTPHADKICKILSKSPNSTIDAALADLSVE--VSPELV--AEVLN 95
P + + IH L H ++ + AL D V+ P+LV V+N
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAV--------------ALVDQMVQRGCQPDLVTYGTVVN 231
Query: 96 KLSNAGV--LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL 153
L G LAL+ + E + K + F+ +I++L K R +V
Sbjct: 232 GLCKRGDIDLALNLLNKMEAAR-IKANVVIFNTIIDSLCKYRHVEV-------------- 276
Query: 154 TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELF 213
AV+ F +ME G++P V +N L++ LC A L
Sbjct: 277 --------------------AVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL 316
Query: 214 DKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKA 273
M + + P++ ++ L++ + ++ L+ ++ EM +PD +TY +LIN +C
Sbjct: 317 SNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH 376
Query: 274 KKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTY 333
+ DEA + M K+ +P+ ++TLING KR+++ +E + + G T TY
Sbjct: 377 NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTY 436
Query: 334 NAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
++ + + D A V +M V + TY I+L
Sbjct: 437 TTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 149/322 (46%), Gaps = 20/322 (6%)
Query: 71 NSTIDAALADLSVEVSPELVAEVLNKLSNAGVLA--------LSFFHWAEKQKGFKHSTE 122
N+ ID+ VEV+ +L E+ K V+ ++ W++ + + E
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 123 --------SFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKE 173
+F+ALI+A K + L E+M QR + T ++ E
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A + F+ M P + +N L++ CK K VE ELF +M RGLV + +YT +++
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+ Q + V ++M D++TY IL++ C K D A+ + +Q+ M
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ I++T+I G+ ++ EA ++ F + P+ TYN ++ C + +A +
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEA---WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLF 558
Query: 354 DEMKQCGVGPNSRTYDIILQPD 375
+MK+ G PNS TY+ +++ +
Sbjct: 559 RKMKEDGTLPNSGTYNTLIRAN 580
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 100/203 (49%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV +AV+ F M K P + +FNKL+ + K E L ++M+ G+ DL +Y+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
I + + ++ L V +M +EPD+VT L+N YC +K+ +AV +M E
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P F+TLI+GL + EA+ ++ G P+ TY VV C +D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
++++M+ + N ++ I+
Sbjct: 243 LNLLNKMEAARIKANVVIFNTII 265
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 107/239 (44%), Gaps = 35/239 (14%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ +AV ++M + G KP+ F L+ L +A L D+M RG PDL +Y
Sbjct: 168 RISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 227
Query: 230 ILLEGWSQQQ------NLLR-----------------VNEVCR------------EMKCE 254
++ G ++ NLL ++ +C+ EM+ +
Sbjct: 228 TVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETK 287
Query: 255 CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEA 314
P+VVTY LIN C ++ +A M EK + P+ F+ LI+ + +L EA
Sbjct: 288 GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA 347
Query: 315 LEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+ +E+ P+T TYN ++ +C R+D+A ++ M PN +TY+ ++
Sbjct: 348 EKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLIN 406
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 91/204 (44%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K + + E+M+ G+ ++ ++ ++ C+ + A + KM G PD+ + +
Sbjct: 98 KFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLS 157
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
LL G+ + + + +M ++PD T+ LI+ K EAV +M ++
Sbjct: 158 SLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR 217
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P + T++NGL +D AL K +A +N ++ + C ++ A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVA 277
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
+ EM+ G+ PN TY+ ++
Sbjct: 278 VDLFTEMETKGIRPNVVTYNSLIN 301
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ A+ F+ ++K ++ + +N +++ +CK+ V +A +LF + + PD+ +Y
Sbjct: 483 KLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYN 539
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ G ++ L +++ R+MK + P+ TY LI A + + EM+
Sbjct: 540 TMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSS 599
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEAL 315
+ S + N L D RLD++
Sbjct: 600 GFVGDASTISLVTNML-HDGRLDKSF 624
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 150/321 (46%), Gaps = 25/321 (7%)
Query: 74 IDAALADLSVEVSPELVAEVLNKLSNAG--VLALSFFHWAEKQKGFKHSTESFHALIEAL 131
+D+ L L ++ ++++E L+ S G L+ SFF W + KHS +S +I L
Sbjct: 34 VDSGL--LKSAITTQVISE-LSLFSGYGGPSLSWSFFIWTDSLPSSKHSLQSSWKMILIL 90
Query: 132 GKIRQFKVIWNLVEDMKQRKLLT----------------RDTXXXXXXXXXXXXK---VK 172
K + FK L++ + QR+LL+ D K +
Sbjct: 91 TKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMIN 150
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+++ FE++ GLKP + L++ L K + + ++F KM G+V ++ Y +L+
Sbjct: 151 DSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLV 210
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
S+ + + ++ EM+ + PD+ TY LI+ YCK + EA+ M+ +
Sbjct: 211 HACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVA 270
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ +++ I+G + R+ EA + + K + A TY ++ YC +D+A R+
Sbjct: 271 PNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHV-TYTTLIDGYCRMNDIDEALRL 329
Query: 353 VDEMKQCGVGPNSRTYDIILQ 373
+ M+ G P TY+ IL+
Sbjct: 330 REVMESRGFSPGVVTYNSILR 350
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 131/293 (44%), Gaps = 7/293 (2%)
Query: 87 PELVAEVLNKL----SNAGVLALSFFHWAE-KQKGFKHSTESFHALIEALGKIRQFKVIW 141
PE V+ V + L + AG++ S + + + G K ++ L+ +L K R +W
Sbjct: 129 PEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVW 188
Query: 142 NLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVE-TFEKMEKYGLKPEVSDFNKLVDVL 200
+ + M + ++ E E +ME+ G+ P++ +N L+ V
Sbjct: 189 KIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVY 248
Query: 201 CKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDV 260
CK +A + D+M G+ P++ +Y + G+S++ + + RE+K + +
Sbjct: 249 CKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDV-TANH 307
Query: 261 VTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEK 320
VTY LI+ YC+ DEA+ M+ + P +++++ L D R+ EA +
Sbjct: 308 VTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTE 367
Query: 321 FKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
P+ T N ++ AYC M A +V +M + G+ + +Y ++
Sbjct: 368 MSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIH 420
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 94/198 (47%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ EA+ E ME G P V +N ++ LC+ + +A L +M + + PD +
Sbjct: 323 IDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNT 382
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ + + ++++ +V ++M + D+ +Y LI+ +CK + + A M EK
Sbjct: 383 LINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKG 442
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P +S L++G + + DE + E+F+ G + Y ++ C ++D A
Sbjct: 443 FSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAK 502
Query: 351 RVVDEMKQCGVGPNSRTY 368
+ + M++ G+ +S +
Sbjct: 503 VLFESMEKKGLVGDSVIF 520
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 96/199 (48%), Gaps = 7/199 (3%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA+ ++ME+ G+ P + +N + + + +A LF +++ + + +YT L+
Sbjct: 256 EALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTTLI 314
Query: 233 EGWSQQQNL---LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+G+ + ++ LR+ EV M+ F P VVTY ++ C+ + EA EM K
Sbjct: 315 DGYCRMNDIDEALRLREV---MESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGK 371
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P +TLIN + + A++ +K +G + +Y A++ +C + +++A
Sbjct: 372 KIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENA 431
Query: 350 YRVVDEMKQCGVGPNSRTY 368
+ M + G P TY
Sbjct: 432 KEELFSMIEKGFSPGYATY 450
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 88/202 (43%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+++EA +M ++P+ N L++ CK + + A ++ KM GL D+ SY
Sbjct: 357 RIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYK 416
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G+ + L E M + F P TY L++ + K DE E +++
Sbjct: 417 ALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKR 476
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ ++ LI + +++D A +E + G ++ + + AY + ++ +A
Sbjct: 477 GLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEA 536
Query: 350 YRVVDEMKQCGVGPNSRTYDII 371
+ D M + N + Y I
Sbjct: 537 SALFDVMYNRRLMVNLKLYKSI 558
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 74/167 (44%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
AV+ +KM + GLK ++ + L+ CK +E A+E M +G P +Y+ L++
Sbjct: 396 AVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVD 455
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+ Q + ++ E + DV Y LI CK ++ D A + M++K ++
Sbjct: 456 GFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVG 515
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
IF+T+ ++ EA ++ Y ++ +Y
Sbjct: 516 DSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASY 562
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 105/205 (51%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ EA FE M P V +N L+ CK+K VE+ ELF +M RGLV + +Y
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L++G Q + ++ ++M + PD++TY IL++ CK K ++A+ + +Q+
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
M P + ++ +I G+ ++++ + + G P Y ++ +C ++A
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQP 374
+ EMK+ G PNS TY+ +++
Sbjct: 555 DALFREMKEDGTLPNSGTYNTLIRA 579
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 101/202 (50%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V +A+ F +M+ G++P V +N L+ LC A L M R + P++ +++
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++ + ++ L+ ++ EM +PD+ TY LIN +C + DEA + M K+
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P+ ++TLI G KR++E +E + + G T TYN ++ + D A
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 351 RVVDEMKQCGVGPNSRTYDIIL 372
++ +M GV P+ TY I+L
Sbjct: 451 KIFKKMVSDGVPPDIITYSILL 472
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 156/340 (45%), Gaps = 20/340 (5%)
Query: 40 PQNLSGSLRIHTLIPHTPHADKICKILSKSPNSTIDAALADLSVEVSPELV--AEVLNKL 97
P ++ + IH L H ++ + + ID +A P+L V+N L
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAV---------ALIDRMVAR---GCQPDLFTYGTVVNGL 230
Query: 98 SNAGV--LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-T 154
G LALS EK K + + +I+AL + NL +M + +
Sbjct: 231 CKRGDIDLALSLLKKMEKGK-IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 155 RDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFD 214
T + +A M + + P V F+ L+D K + +A++L+D
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 215 KMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKC-ECFEPDVVTYGILINAYCKA 273
+M R + PD+ +Y+ L+ G+ L + M +CF P+VVTY LI +CKA
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLIKGFCKA 408
Query: 274 KKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTY 333
K+ +E + + EM ++ ++ + ++TLI GL D A + ++K ++G P+ TY
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468
Query: 334 NAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+ ++ C +++ A V + +++ + P+ TY+I+++
Sbjct: 469 SILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIE 508
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 105/204 (51%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V+E +E F +M + GL +N L+ L ++ + AQ++F KM G+ PD+ +Y+
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
ILL+G + L + V ++ EPD+ TY I+I CKA K ++ + + K
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ I++T+I+G +EA + + K +G P + TYN ++ A +
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAAS 589
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
++ EM+ CG ++ T +++
Sbjct: 590 AELIKEMRSCGFVGDASTISMVIN 613
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ +AV+ F +M + P + +FNKL+ + K + L ++M++ + DL SY
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL+ + ++ L V +M +EPD+VT L+N YC K+ EAV +M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P+ F+TLI+GL + EA+ ++ A G P+ TY VV C +D A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQPDKGSKN 380
++ +M++ + + Y I+ KN
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKN 270
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 96/199 (48%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ EAV ++M +P FN L+ L +A L D+M RG PDL +Y
Sbjct: 165 RISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 224
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ G ++ ++ + ++M+ E DVV Y +I+A C K ++A+ + EM K
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 284
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ +++LI L + R +A P T++A++ A+ ++ +A
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 350 YRVVDEMKQCGVGPNSRTY 368
++ DEM + + P+ TY
Sbjct: 345 EKLYDEMIKRSIDPDIFTY 363
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 88/195 (45%)
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
E+M+ + ++ +N L++ C+ + A + KM G PD+ + + LL G+
Sbjct: 104 ERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHG 163
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
+ + + +M ++P+ VT+ LI+ K EAV M + P +
Sbjct: 164 KRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTY 223
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
T++NGL +D AL +K + + Y ++ A C ++DA + EM
Sbjct: 224 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDN 283
Query: 359 CGVGPNSRTYDIILQ 373
G+ PN TY+ +++
Sbjct: 284 KGIRPNVVTYNSLIR 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+++A+ FE ++K ++P++ +N +++ +CK+ VE +LF + +G+ P++ YT
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ G+ ++ + + REMK + P+ TY LI A + + EM+
Sbjct: 540 TMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSC 599
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEA 314
+ S +IN L D RL+++
Sbjct: 600 GFVGDASTISMVINML-HDGRLEKS 623
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 129/260 (49%), Gaps = 1/260 (0%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKE 173
K K ++ L+ L K+++F++ ++++M + + K++E
Sbjct: 291 KDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEE 350
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+ +++ +G+ P + +N L+D LCK + +A+ LFD+M GL P+ +Y+IL++
Sbjct: 351 ALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILID 410
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ ++ L EM + V Y LIN +CK A GF EM K + P
Sbjct: 411 MFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEP 470
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ +++L+ G S ++++AL Y + G AP T+ ++ + + DA ++
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Query: 354 DEMKQCGVGPNSRTYDIILQ 373
+EM + V PN TY+++++
Sbjct: 531 NEMAEWNVKPNRVTYNVMIE 550
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 99/199 (49%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K EA F++M K GL+P ++ L+D+ C+ ++ A +M GL + Y
Sbjct: 382 KFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYN 441
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G + ++ EM + EP VVTY L+ YC K ++A+ YHEM K
Sbjct: 442 SLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK 501
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ PS + F+TL++GL + +A++ + + P TYN ++ YC M A
Sbjct: 502 GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561
Query: 350 YRVVDEMKQCGVGPNSRTY 368
+ + EM + G+ P++ +Y
Sbjct: 562 FEFLKEMTEKGIVPDTYSY 580
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 103/199 (51%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+E F M G++P+V + ++ LC+ K + +A+E+ M G ++ Y +L++
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G ++Q + + +++ + +PDVVTY L+ CK ++++ + EM P
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
S S+L+ GL +++EAL ++ G +P YNA++ + C + +A +
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390
Query: 354 DEMKQCGVGPNSRTYDIIL 372
D M + G+ PN TY I++
Sbjct: 391 DRMGKIGLRPNDVTYSILI 409
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 35/237 (14%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY-- 228
+++AV+ F +M ++ +KP +N +++ C+ + KA E +M +G+VPD SY
Sbjct: 523 IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRP 582
Query: 229 ---------------------------------TILLEGWSQQQNLLRVNEVCREMKCEC 255
T LL G+ ++ L VC+EM
Sbjct: 583 LIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
+ D+V YG+LI+ K K G EM ++ + P I++++I+ EA
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAF 702
Query: 316 EFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
++ G P TY AV+ C + +++A + +M+ PN TY L
Sbjct: 703 GIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFL 759
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 115/251 (45%), Gaps = 1/251 (0%)
Query: 124 FHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKME 182
++ALI++L K R+F L + M + L D T K+ A+ +M
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 183 KYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLL 242
GLK V +N L++ CK + A+ +M ++ L P + +YT L+ G+ + +
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 243 RVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLI 302
+ + EM + P + T+ L++ +A +AV ++EM E N+ P+ ++ +I
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Query: 303 NGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVG 362
G + + +A EF ++ G P+T +Y ++ C + + +A VD + +
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCE 609
Query: 363 PNSRTYDIILQ 373
N Y +L
Sbjct: 610 LNEICYTGLLH 620
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%)
Query: 186 LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVN 245
L+P V + L+ C + KA L+ +M +G+ P + ++T LL G + +
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527
Query: 246 EVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGL 305
++ EM +P+ VTY ++I YC+ +A F EM EK ++P + + LI+GL
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Query: 306 GSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNS 365
+ EA F + Y ++ +C ++++A V EM Q GV +
Sbjct: 588 CLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDL 647
Query: 366 RTYDIILQPDKGSKNPRSLLGF 387
Y +++ K+ + G
Sbjct: 648 VCYGVLIDGSLKHKDRKLFFGL 669
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 116/273 (42%), Gaps = 11/273 (4%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXX-XXXXXXKVK 172
Q+G + LI+ K + K+ + L+++M R L D K
Sbjct: 640 QRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFK 699
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT--- 229
EA ++ M G P + +++ LCK+ V +A+ L KM+ VP+ +Y
Sbjct: 700 EAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFL 759
Query: 230 -ILLEGWSQQQNLLRV-NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
IL +G Q + + N + + + + TY +LI +C+ + +EA M
Sbjct: 760 DILTKGEVDMQKAVELHNAILKGLL-----ANTATYNMLIRGFCRQGRIEEASELITRMI 814
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
+ P ++T+IN L + +A+E + G P+ YN ++ C + M
Sbjct: 815 GDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMG 874
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILQPDKGSKN 380
A + +EM + G+ PN++T D SK+
Sbjct: 875 KATELRNEMLRQGLIPNNKTSRTTTSNDTSSKS 907
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 102/244 (41%), Gaps = 5/244 (2%)
Query: 121 TESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKE---AVET 177
+ AL+ L K R F + L DM + R ++K+ A E
Sbjct: 192 VRTLSALLHGLVKFRHFGLAMELFNDMVSVGI--RPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
ME G + +N L+D LCK + V +A + + + L PD+ +Y L+ G +
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
Q E+ EM C F P L+ K K +EA+ + + + P+ +
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
++ LI+ L ++ EA +++ G P TY+ ++ +C ++D A + EM
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 358 QCGV 361
G+
Sbjct: 430 DTGL 433
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 124/288 (43%), Gaps = 8/288 (2%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXX 162
ALSF G K S +++LI K + +M +KL T T
Sbjct: 421 ALSFL-GEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLM 479
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
K+ +A+ + +M G+ P + F L+ L ++ + A +LF++M +
Sbjct: 480 GGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVK 539
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
P+ +Y +++EG+ ++ ++ + E +EM + PD +Y LI+ C + EA F
Sbjct: 540 PNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVF 599
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
+ + N + ++ L++G + +L+EAL ++ G + Y ++
Sbjct: 600 VDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG--- 656
Query: 343 SMRMDDA---YRVVDEMKQCGVGPNSRTYDIILQPDKGSKNPRSLLGF 387
S++ D + ++ EM G+ P+ Y ++ + + + G
Sbjct: 657 SLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI 704
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 133/307 (43%), Gaps = 37/307 (12%)
Query: 103 LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXX 162
LAL H + KG K + S+ L++ K+ + +N++ +M L
Sbjct: 407 LALEVLH-DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465
Query: 163 XXXX-XXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGL 221
++ EAVE F +M + G KP+V FN L+ LC+ ++ A L M G+
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Query: 222 VPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTY------------------ 263
V + +Y L+ + ++ + ++ EM + D +TY
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARS 585
Query: 264 -----------------GILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLG 306
ILIN C++ +EAV F EM + P F++LINGL
Sbjct: 586 LFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLC 645
Query: 307 SDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSR 366
R+++ L + K +A G P+T T+N ++ C + DA ++DE + G PN R
Sbjct: 646 RAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHR 705
Query: 367 TYDIILQ 373
T+ I+LQ
Sbjct: 706 TWSILLQ 712
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 122/259 (47%), Gaps = 2/259 (0%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEA 174
+GF ++ L+ L KI + +L + + +++ +T K
Sbjct: 316 RGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAV 375
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
+ + + YG+ P+V +N L+ K V A E+ MR++G P++ SYTIL++G
Sbjct: 376 LS--DMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDG 433
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
+ + + V EM + +P+ V + LI+A+CK + EAV + EM K P
Sbjct: 434 FCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD 493
Query: 295 PHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD 354
+ F++LI+GL + AL + G T TYN ++ A+ + +A ++V+
Sbjct: 494 VYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVN 553
Query: 355 EMKQCGVGPNSRTYDIILQ 373
EM G + TY+ +++
Sbjct: 554 EMVFQGSPLDEITYNSLIK 572
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 154/364 (42%), Gaps = 27/364 (7%)
Query: 28 LTPLSTSPTIKLPQNLSGSLRIHTLIPHTP---HADKICKIL-----SKSPNSTIDAALA 79
+TP ++LP N+S S+ + + H+ + ++L + TID L
Sbjct: 76 ITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLI 135
Query: 80 ---DLSVEVSPELVAEVLNKLSNAGV------LALSFFHWAEKQKGFKHSTESFHALIEA 130
D + L ++ AG L L + + FK S++ ++E
Sbjct: 136 QMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFK----SYNVVLEI 191
Query: 131 LGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPE 189
L KV N+ DM RK+ T T ++ A+ M K+G P
Sbjct: 192 LVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPN 251
Query: 190 VSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCR 249
+ L+ L K V +A +L ++M G VPD +++ ++ G + + ++
Sbjct: 252 SVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVN 311
Query: 250 EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDK 309
M F PD +TYG L+N CK + D A ++ + + P IF+TLI+G +
Sbjct: 312 RMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHG 367
Query: 310 RLDEA-LEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
RLD+A + + G P+ TYN+++ Y + A V+ +M+ G PN +Y
Sbjct: 368 RLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSY 427
Query: 369 DIIL 372
I++
Sbjct: 428 TILV 431
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMK-QRKLLTRDTXXXXXXXXXXXXKVKE 173
+G +T +++ LI A + + K LV +M Q L T +V +
Sbjct: 523 EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A FEKM + G P N L++ LC+S VE+A E +M RG PD+ ++ L+
Sbjct: 583 ARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLIN 642
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G + + + R+++ E PD VT+ L++ CK +A E E +P
Sbjct: 643 GLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVP 702
Query: 294 SPHIFSTLINGLGSDKRLDEALEFY 318
+ +S L+ + + LD FY
Sbjct: 703 NHRTWSILLQSIIPQETLDRR-RFY 726
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 105/202 (51%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+ A+ KME+ +K V +N ++D LCK AQ LF +M +G+ PD+ +Y+ +
Sbjct: 58 ESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++ + + ++ R+M PDVVT+ LINA K K EA Y +M + +
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P+ ++++I+G RL++A + + +P+ T++ ++ YC + R+D+
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237
Query: 352 VVDEMKQCGVGPNSRTYDIILQ 373
+ EM + G+ N+ TY ++
Sbjct: 238 IFCEMHRRGIVANTVTYTTLIH 259
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 131/285 (45%), Gaps = 4/285 (1%)
Query: 77 ALADLSVEVSPELVAEVLNKLSNAGVL--ALSFFHWAEKQKGFKHSTESFHALIEALGKI 134
AL D VE + ++N L G AL+ E+ K ++A+I+ L K
Sbjct: 31 ALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKMEETH-IKAHVVIYNAIIDRLCKD 89
Query: 135 RQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDF 193
NL +M + + T + +A + M + + P+V F
Sbjct: 90 GHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTF 149
Query: 194 NKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKC 253
+ L++ L K V +A+E++ M RG+ P +Y +++G+ +Q L + M
Sbjct: 150 SALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMAS 209
Query: 254 ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDE 313
+ PDVVT+ LIN YCKAK+ D + + EM + ++ + ++TLI+G LD
Sbjct: 210 KSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDA 269
Query: 314 ALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
A + ++G AP T+ +++ + C + A+ +++++++
Sbjct: 270 AQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 101/203 (49%), Gaps = 4/203 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V +A+ ++M + G +P + +++ LCK E A L KM + + Y
Sbjct: 25 RVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYN 80
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+++ + + + + EM + PDV+TY +I+++C++ ++ +A +M E+
Sbjct: 81 AIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIER 140
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P FS LIN L + ++ EA E Y G P T TYN+++ +C R++DA
Sbjct: 141 QINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDA 200
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
R++D M P+ T+ ++
Sbjct: 201 KRMLDSMASKSCSPDVVTFSTLI 223
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 156/321 (48%), Gaps = 11/321 (3%)
Query: 78 LADLSVEVSPEL--VAEVLNKLSNAGVLALS--FFHWAEKQKGFKHSTESFHALIEALGK 133
L + V P L ++ LN L ++G + LS +A+ G + +T F+ L++ K
Sbjct: 149 LIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCK 208
Query: 134 IRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXKVKEAVETFEKM-EKYGLKPEV 190
+ +VE+MK+ + + T + KEAVE FE M K G+ P+
Sbjct: 209 NGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDP 268
Query: 191 SDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCRE 250
FN +++ C++ VE+A+++ D M+ G P++ +Y+ L+ G+ + + + E
Sbjct: 269 VTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDE 328
Query: 251 MKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKR 310
+K + D V Y L+N +C+ + DEA+ EM+ ++ ++ GL S+ R
Sbjct: 329 VKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGR 388
Query: 311 LDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYD- 369
+EAL+ +++ + G +Y ++ A C + ++ A + + M + G+ P+ T++
Sbjct: 389 SEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNE 448
Query: 370 -IILQPDKGSK--NPRSLLGF 387
++ + G R L+GF
Sbjct: 449 LVVRLCESGYTEIGVRVLIGF 469
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 134/310 (43%), Gaps = 40/310 (12%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMK------QRKLL---- 153
L F+ A +QKGF H+ ++ L++ L + ++F + ++ MK Q L
Sbjct: 72 VLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLM 131
Query: 154 -------TRDTXXXXXXXXXXXXKVKEAVETF----------------EKMEKY-----G 185
D +VK ++ K+ Y G
Sbjct: 132 RHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLG 191
Query: 186 LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGL-VPDLKSYTILLEGWSQQQNLLRV 244
L+P FN LV CK+ + A + ++M+ G+ P+ +Y+ L++
Sbjct: 192 LQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEA 251
Query: 245 NEVCREMKC-ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLIN 303
E+ +M E PD VT+ ++IN +C+A + + A M++ P+ + +S L+N
Sbjct: 252 VELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMN 311
Query: 304 GLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGP 363
G ++ EA + +++ K G +T Y ++ +C + D+A +++ EMK
Sbjct: 312 GFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRA 371
Query: 364 NSRTYDIILQ 373
++ TY++IL+
Sbjct: 372 DTLTYNVILR 381
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 115/253 (45%), Gaps = 2/253 (0%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXKVKEAVETFEK 180
++ L++ L + K L EDM ++ ++ D T +V+ A + +
Sbjct: 234 TYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDF 293
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
M+K G P V +++ L++ CK +++A++ FD+++ GL D YT L+ + +
Sbjct: 294 MKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGE 353
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
++ EMK D +TY +++ + +EA+ + + + + +
Sbjct: 354 TDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRI 413
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
++N L + L++A++F G P T+N +V C S + RV+ + G
Sbjct: 414 ILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIG 473
Query: 361 VGPNSRTYDIILQ 373
+ P +++ +++
Sbjct: 474 LIPGPKSWGAVVE 486
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 167/376 (44%), Gaps = 18/376 (4%)
Query: 14 FSSNLPLSKPYPASLTPLSTSPTIKLPQNLSGSLRIHTLIPH-----TPHADKICKILSK 68
+ + P KP+P L P I QN+ +L+I T + D IL K
Sbjct: 33 YCTEKPPIKPWPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFK 92
Query: 69 SPNST----IDAALADLS-----VEVSPELVAEVLNKLSNAGVLALSFFHWAEKQK-GFK 118
+ +++ +ADL ++ L ++L AG S + G K
Sbjct: 93 LSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVK 152
Query: 119 HSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXKVKEAVE 176
S S + L+ L + ++F ++ + ++ K+ +T + T ++ A +
Sbjct: 153 RSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYK 212
Query: 177 TFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWS 236
+++ GL P + + ++ +E A+ + ++M RG PD +YT+L++G+
Sbjct: 213 VLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYC 272
Query: 237 QQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPH 296
+ V +M+ EP+ VTYG++I A CK KK EA + EM E++ MP
Sbjct: 273 KLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSS 332
Query: 297 IFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM 356
+ +I+ L D ++DEA + K N P+ + ++ C R+ +A ++ DE
Sbjct: 333 LCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF 392
Query: 357 KQCGVGPNSRTYDIIL 372
++ G P+ TY+ ++
Sbjct: 393 EK-GSIPSLLTYNTLI 407
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/275 (19%), Positives = 118/275 (42%), Gaps = 38/275 (13%)
Query: 103 LALSFFHWAEKQK-GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRK---LLTRDTX 158
LAL F +A K GF H+ +++H+++ L + R F + +L+ D++ +
Sbjct: 64 LALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLF 123
Query: 159 XXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRH 218
+ + ++ F ++ +G+K V N L++VL +++ + +F +
Sbjct: 124 IDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSK- 182
Query: 219 RGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDE 278
+S+ I P++ T +L+ A CK +
Sbjct: 183 -------ESFGI--------------------------TPNIFTCNLLVKALCKKNDIES 209
Query: 279 AVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVG 338
A E+ ++P+ ++T++ G + ++ A E+ G+ P+ TY ++
Sbjct: 210 AYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMD 269
Query: 339 AYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
YC R +A V+D+M++ + PN TY ++++
Sbjct: 270 GYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIR 304
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 2/204 (0%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXX-XXXKVKEAVETFEKM 181
++ +I AL K ++ N+ ++M +R + + KV EA + KM
Sbjct: 298 TYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKM 357
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
K P+ + + L+ LCK V +A++LFD+ +G +P L +Y L+ G ++ L
Sbjct: 358 LKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGEL 416
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
+ +M +P+ TY +LI K E V EM E P+ F L
Sbjct: 417 TEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLIL 476
Query: 302 INGLGSDKRLDEALEFYEKFKANG 325
GL + ++A++ NG
Sbjct: 477 FEGLQKLGKEEDAMKIVSMAVMNG 500
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 132/277 (47%), Gaps = 13/277 (4%)
Query: 106 SFFHWAEKQKGFKHSTE--------SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD- 156
SF W++ Q+ + E +F+ALI A K + L ++M R +
Sbjct: 343 SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 402
Query: 157 TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM 216
T + +A F+ M P+V FN ++DV C++K V++ +L ++
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREI 458
Query: 217 RHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKY 276
RGLV + +Y L+ G+ + NL ++ +EM PD +T IL+ +C+ +K
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Query: 277 DEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAV 336
+EA+ + +Q + ++ +I+G+ ++DEA + + +G P+ TYN +
Sbjct: 519 EEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM 578
Query: 337 VGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+ +C + DA + +MK G P++ TY+ +++
Sbjct: 579 ISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 110/208 (52%), Gaps = 16/208 (7%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
K A+ KME+ +KP+V ++ ++D LCK AQ LF +M +G+ P++ +Y +
Sbjct: 278 KSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCM 337
Query: 232 LEG------WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHE 285
++G WS Q LLR + + RE+ PDV+T+ LI+A K K EA E
Sbjct: 338 IDGFCSFGRWSDAQRLLR-DMIEREIN-----PDVLTFNALISASVKEGKLFEAEKLCDE 391
Query: 286 MQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMR 345
M + + P ++++I G R D+A ++ +P+ T+N ++ YC + R
Sbjct: 392 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKR 447
Query: 346 MDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+D+ +++ E+ + G+ N+ TY+ ++
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIH 475
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 97/202 (48%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V E ++ ++ + GL + +N L+ C+ ++ AQ+LF +M G+ PD +
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
ILL G+ + + L E+ ++ + D V Y I+I+ CK K DEA + +
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P ++ +I+G + +A + K K NG P+ TYN ++ + +D +
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626
Query: 350 YRVVDEMKQCGVGPNSRTYDII 371
++ EM+ G ++ T ++
Sbjct: 627 IELISEMRSNGFSGDAFTIKMV 648
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 99/197 (50%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EAV F++M + GL P V FN L++ LC V +A L +KM +GL D+ +Y ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G + + + +M+ +PDVV Y +I+ CK + +A + EM EK +
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ ++ +I+G S R +A P+ T+NA++ A ++ +A ++
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 353 VDEMKQCGVGPNSRTYD 369
DEM + P++ TY+
Sbjct: 389 CDEMLHRCIFPDTVTYN 405
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 110/271 (40%), Gaps = 22/271 (8%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXX 162
A+ FF + + + F + + + +I ++ + V +L M+ R++ L +
Sbjct: 90 AIDFFDYMVRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILI 148
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
K+ ++ TF K+ K G +P+V FN L+ LC + +A LF M G
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGF- 207
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
LE + ++ + P V+T+ LIN C + EA
Sbjct: 208 ---------LEAVALFDQMVEIG----------LTPVVITFNTLINGLCLEGRVLEAAAL 248
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
++M K + + T++NG+ AL K + P+ Y+A++ C
Sbjct: 249 VNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCK 308
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
DA + EM + G+ PN TY+ ++
Sbjct: 309 DGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 126/261 (48%), Gaps = 7/261 (2%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDM----KQRKLLTRDTXXXXXXXXXXXXKV 171
GF+ S +F +L+ + +F +LV+ + + ++ +T +V
Sbjct: 144 GFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKG---QV 200
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
A++ + M+K G++P+V +N L+ L S + + + M G+ PD+ +++ L
Sbjct: 201 NTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSAL 260
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++ + ++ LL + EM P++VTY LIN C DEA + + K
Sbjct: 261 IDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGF 320
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P+ ++TLING KR+D+ ++ +G +T TYN + YC + + A +
Sbjct: 321 FPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEK 380
Query: 352 VVDEMKQCGVGPNSRTYDIIL 372
V+ M CGV P+ T++I+L
Sbjct: 381 VLGRMVSCGVHPDMYTFNILL 401
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 35/239 (14%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ A+ KM K G +P + F LV+ C +A L D++ G P++ Y
Sbjct: 129 RLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYN 188
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTY-------------------------- 263
+++ ++ + +V + MK PDVVTY
Sbjct: 189 TIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRM 248
Query: 264 GI---------LINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEA 314
GI LI+ Y K + EA Y+EM ++++ P+ +++LINGL LDEA
Sbjct: 249 GISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEA 308
Query: 315 LEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+ + GF P TYN ++ YC + R+DD +++ M + GV ++ TY+ + Q
Sbjct: 309 KKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQ 367
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 104/204 (50%), Gaps = 2/204 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K +A+ F M + P + DF++L+ + K E LF + G+ DL S+T
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 230 ILLEGWSQQQNL-LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
L++ + + L L ++ + + MK FEP +VT+G L+N +C ++ EA+ ++
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLG-FEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVG 177
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
P+ I++T+I+ L +++ AL+ + K G P+ TYN+++ S
Sbjct: 178 LGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGV 237
Query: 349 AYRVVDEMKQCGVGPNSRTYDIIL 372
+ R++ +M + G+ P+ T+ ++
Sbjct: 238 SARILSDMMRMGISPDVITFSALI 261
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 119/258 (46%), Gaps = 3/258 (1%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXK 170
K+ G + ++++LI L + V ++ DM R ++ D T +
Sbjct: 211 KKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDM-MRMGISPDVITFSALIDVYGKEGQ 269
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ EA + + +M + + P + +N L++ LC +++A+++ + + +G P+ +Y
Sbjct: 270 LLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNT 329
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ G+ + + + ++ M + + D TY L YC+A K+ A M
Sbjct: 330 LINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCG 389
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ P + F+ L++GL ++ +AL E + + TYN ++ C + +++DA+
Sbjct: 390 VHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAW 449
Query: 351 RVVDEMKQCGVGPNSRTY 368
+ + GV P+ TY
Sbjct: 450 YLFCSLALKGVSPDVITY 467
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 74/160 (46%), Gaps = 1/160 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V + ++ M + G+ + +N L C++ A+++ +M G+ PD+ ++
Sbjct: 339 RVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFN 398
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
ILL+G + + +++ ++TY I+I CKA K ++A + + K
Sbjct: 399 ILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALK 458
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKF-KANGFAP 328
+ P + T++ GL + EA E Y K K +G P
Sbjct: 459 GVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 123/259 (47%), Gaps = 1/259 (0%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXK-VKE 173
KG + ++ A+I L K + + NL+ M++ K+ + V +
Sbjct: 199 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDD 258
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+ F +M+ G++P+V ++ L+ LC A L M R + P++ ++ L++
Sbjct: 259 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
++++ L+ ++ EM +P++VTY LIN +C + DEA + M K+ +P
Sbjct: 319 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 378
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
++TLING K++ + +E + G T TY ++ + + D+A V
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF 438
Query: 354 DEMKQCGVGPNSRTYDIIL 372
+M GV PN TY+ +L
Sbjct: 439 KQMVSDGVHPNIMTYNTLL 457
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 137/290 (47%), Gaps = 6/290 (2%)
Query: 87 PELV--AEVLNKLSNAGV--LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWN 142
P+LV V+N L G LAL+ + EK K + + +I++L K R N
Sbjct: 203 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK-IEADVVIYSTVIDSLCKYRHVDDALN 261
Query: 143 LVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLC 201
L +M + + T + +A M + + P V FN L+D
Sbjct: 262 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321
Query: 202 KSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVV 261
K + +A++LFD+M R + P++ +Y L+ G+ L ++ M + PDVV
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 381
Query: 262 TYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKF 321
TY LIN +CKAKK + + + +M + ++ + ++TLI+G D A +++
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 322 KANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDII 371
++G P TYN ++ C + +++ A V + +++ + P+ TY+I+
Sbjct: 442 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 123/253 (48%), Gaps = 1/253 (0%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKM 181
+F++LI+A K + L ++M QR + T ++ EA + F M
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
P+V +N L++ CK+K V ELF M RGLV + +YT L+ G+ Q +
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
V ++M + P+++TY L++ CK K ++A+ + +Q+ M P + ++ +
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
G+ ++++ + + G P+ YN ++ +C ++AY + +MK+ G
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551
Query: 362 GPNSRTYDIILQP 374
P+S TY+ +++
Sbjct: 552 LPDSGTYNTLIRA 564
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 127/275 (46%), Gaps = 8/275 (2%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMK----QRKLLTRDTXX 159
A+ F K + F E F L+ A+ K+++F ++ + E M+ L T +
Sbjct: 49 AVDLFGEMVKSRPFPSIVE-FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 160 XXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHR 219
++ A+ KM K G P + N L++ C + +A L D+M
Sbjct: 108 NCLCRRS---QLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 220 GLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEA 279
G PD ++T L+ G Q + M + +PD+VTYG +IN CK + D A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 280 VGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
+ ++M++ + I+ST+I+ L + +D+AL + + G P+ TY++++
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 340 YCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQP 374
C R DA R++ +M + + PN T++ ++
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 100/204 (49%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K EAV E+M G +P++ + +++ LCK + A L +KM + D+ Y+
Sbjct: 185 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYS 244
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+++ + +++ + EM + PDV TY LI+ C ++ +A +M E+
Sbjct: 245 TVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER 304
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ F++LI+ + +L EA + +++ P TYN+++ +C R+D+A
Sbjct: 305 KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEA 364
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
++ M P+ TY+ ++
Sbjct: 365 QQIFTLMVSKDCLPDVVTYNTLIN 388
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ EAV+ F +M K P + +F+KL+ + K K + +KM G+ +L +Y
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
I++ ++ L + +M + P +VT L+N +C + EAV +M E
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P F+TL++GL + EA+ E+ G P+ TY AV+ C D A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
++++M++ + + Y ++
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVI 247
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 105/205 (51%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+++EA ++M + G +P + L+ LC ++KA LFD+M RG P++ +YT
Sbjct: 281 RLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYT 340
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L++G + + N VCR+M + P V+TY LIN YCK + A M+++
Sbjct: 341 VLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKR 400
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P+ F+ L+ GL + +A+ ++ NG +P+ +YN ++ C M+ A
Sbjct: 401 ACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTA 460
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQP 374
Y+++ M + P+ T+ I+
Sbjct: 461 YKLLSSMNCFDIEPDCLTFTAIINA 485
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 133/320 (41%), Gaps = 41/320 (12%)
Query: 93 VLNKLSNAGVLALSFFHWAEKQ-KGFKHSTESFHALIEAL---GKIRQFKVIWNLVEDMK 148
++ L + G++ +F + E +G K + ++ LI+ L GKI + + + +K
Sbjct: 307 LIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCR--KMVK 364
Query: 149 QRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEK 208
R + T +V A E MEK KP V FN+L++ LC+ K
Sbjct: 365 DRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYK 424
Query: 209 AQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILIN 268
A L +M GL PD+ SY +L++G ++ ++ ++ M C EPD +T+ +IN
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Query: 269 AYCKAKKYDEAVGFYHEMQEKN-----------------------------------MMP 293
A+CK K D A F M K ++
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILT 544
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+PH + +++ L ++ E L K G P TY +V S + ++R++
Sbjct: 545 TPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRIL 604
Query: 354 DEMKQCGVGPNSRTYDIILQ 373
+ MK G PN Y II+
Sbjct: 605 ELMKLSGCLPNVYPYTIIIN 624
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 7/204 (3%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A T+ +ME G + D+ +V+ LCK+ E A+ K+ G V D T LL
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238
Query: 234 GWSQQQNL---LRVNEV-CREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
G+ + NL L+V +V +E+ C P+ V+Y ILI+ C+ + +EA G +M EK
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTC---APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK 295
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
PS ++ LI L +D+A +++ G P TY ++ C ++++A
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
V +M + + P+ TY+ ++
Sbjct: 356 NGVCRKMVKDRIFPSVITYNALIN 379
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 2/213 (0%)
Query: 106 SFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDM-KQRKLLTRDTXXXXXXX 164
S F +KG + LI+ + K+ + + ++E + K R L T +
Sbjct: 496 SAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDM 555
Query: 165 XXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPD 224
KVKE + K+ K GL P V + LVD L +S + + + + M+ G +P+
Sbjct: 556 LSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPN 615
Query: 225 LKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYH 284
+ YTI++ G Q + ++ M+ P+ VTY +++ Y K D A+
Sbjct: 616 VYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVR 675
Query: 285 EMQEKNMMPSPHIFSTLING-LGSDKRLDEALE 316
M E+ + I+S+L+ G + S K +D + E
Sbjct: 676 AMVERGYELNDRIYSSLLQGFVLSQKGIDNSEE 708
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 84/179 (46%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K ++A+ E + K + N ++D+L K V++ + K+ GLVP + +YT
Sbjct: 526 KTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYT 585
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L++G + ++ + MK P+V Y I+IN C+ + +EA MQ+
Sbjct: 586 TLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDS 645
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
+ P+ ++ ++ G ++ +LD ALE G+ Y++++ + S + D
Sbjct: 646 GVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGID 704
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 94/235 (40%), Gaps = 35/235 (14%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A + M + ++P+ F +++ CK + A M +G+ D + T L++
Sbjct: 460 AYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLID 519
Query: 234 GW---SQQQNLLRVNEVCREMK------------------CECFE--------------P 258
G + ++ L + E +M+ C+ E P
Sbjct: 520 GVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVP 579
Query: 259 DVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFY 318
VVTY L++ ++ + M+ +P+ + ++ +INGL R++EA +
Sbjct: 580 SVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLL 639
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+ +G +P TY +V Y + ++D A V M + G N R Y +LQ
Sbjct: 640 SAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQ 694
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 132/277 (47%), Gaps = 13/277 (4%)
Query: 106 SFFHWAEKQKGFKHSTE--------SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD- 156
SF W++ Q+ + E +F+ALI A K + L ++M R +
Sbjct: 343 SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 402
Query: 157 TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM 216
T + +A F+ M P+V FN ++DV C++K V++ +L ++
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREI 458
Query: 217 RHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKY 276
RGLV + +Y L+ G+ + NL ++ +EM PD +T IL+ +C+ +K
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Query: 277 DEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAV 336
+EA+ + +Q + ++ +I+G+ ++DEA + + +G P+ TYN +
Sbjct: 519 EEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM 578
Query: 337 VGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+ +C + DA + +MK G P++ TY+ +++
Sbjct: 579 ISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 110/208 (52%), Gaps = 16/208 (7%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
K A+ KME+ +KP+V ++ ++D LCK AQ LF +M +G+ P++ +Y +
Sbjct: 278 KSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCM 337
Query: 232 LEG------WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHE 285
++G WS Q LLR + + RE+ PDV+T+ LI+A K K EA E
Sbjct: 338 IDGFCSFGRWSDAQRLLR-DMIEREIN-----PDVLTFNALISASVKEGKLFEAEKLCDE 391
Query: 286 MQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMR 345
M + + P ++++I G R D+A ++ +P+ T+N ++ YC + R
Sbjct: 392 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKR 447
Query: 346 MDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+D+ +++ E+ + G+ N+ TY+ ++
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIH 475
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 95/198 (47%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V E ++ ++ + GL + +N L+ C+ ++ AQ+LF +M G+ PD +
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
ILL G+ + + L E+ ++ + D V Y I+I+ CK K DEA + +
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P ++ +I+G + +A + K K NG P+ TYN ++ + +D +
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626
Query: 350 YRVVDEMKQCGVGPNSRT 367
++ EM+ G ++ T
Sbjct: 627 IELISEMRSNGFSGDAFT 644
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 101/200 (50%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EAV F++M + GL P V FN L++ LC V +A L +KM +GL D+ +Y ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G + + + +M+ +PDVV Y +I+ CK + +A + EM EK +
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ ++ +I+G S R +A P+ T+NA++ A ++ +A ++
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 353 VDEMKQCGVGPNSRTYDIIL 372
DEM + P++ TY+ ++
Sbjct: 389 CDEMLHRCIFPDTVTYNSMI 408
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 102/211 (48%), Gaps = 1/211 (0%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXX-XXXXKVKEAVETFEKM 181
+F+ +I+ + ++ L+ ++ +R L+ T + A + F++M
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
+G+ P+ N L+ C+++ +E+A ELF+ ++ + D +Y I++ G + +
Sbjct: 494 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 553
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
++ + EPDV TY ++I+ +C +A +H+M++ P ++TL
Sbjct: 554 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 613
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPT 332
I G +D+++E + ++NGF+ + T
Sbjct: 614 IRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 110/270 (40%), Gaps = 22/270 (8%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXX 162
A+ FF + + + F + + + +I ++ + V +L M+ R++ L +
Sbjct: 90 AIDFFDYMVRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILI 148
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
K+ ++ TF K+ K G +P+V FN L+ LC + +A LF M G +
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL 208
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
+ + ++E P V+T+ LIN C + EA
Sbjct: 209 EAVALFDQMVEIG--------------------LTPVVITFNTLINGLCLEGRVLEAAAL 248
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
++M K + + T++NG+ AL K + P+ Y+A++ C
Sbjct: 249 VNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCK 308
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
DA + EM + G+ PN TY+ ++
Sbjct: 309 DGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 338
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV EA + F + +G++P+V +N ++ C ++ A LF KM+ G PD +Y
Sbjct: 552 KVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYN 611
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKA 273
L+ G + + + E+ EM+ F D T + C+
Sbjct: 612 TLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRV 655
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 102/200 (51%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V ++ F +M K G P+ + L+ LC+ +++A++LF +M + P + +YT
Sbjct: 173 VDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTS 232
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ G +N+ EMK + EP+V TY L++ CK + +A+ + M +
Sbjct: 233 LINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARG 292
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P+ ++TLI GL ++++ EA+E ++ G P+ Y V+ +C + +A
Sbjct: 293 CRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAA 352
Query: 351 RVVDEMKQCGVGPNSRTYDI 370
+DEM G+ PN T++I
Sbjct: 353 NFLDEMILGGITPNRLTWNI 372
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 105/200 (52%), Gaps = 1/200 (0%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSK-SVEKAQELFDKMRHRGLVPDLKSYTILL 232
A + ++ M + GL P V+ N L+ LC++ +V+ ++F +M RG PD +Y L+
Sbjct: 140 AFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLI 199
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G + + ++ EM + P VVTY LIN C +K DEA+ + EM+ K +
Sbjct: 200 SGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIE 259
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ +S+L++GL D R +A+E +E A G P TY ++ C ++ +A +
Sbjct: 260 PNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVEL 319
Query: 353 VDEMKQCGVGPNSRTYDIIL 372
+D M G+ P++ Y ++
Sbjct: 320 LDRMNLQGLKPDAGLYGKVI 339
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 84/165 (50%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ EA + F +M + P V + L++ LC SK+V++A ++M+ +G+ P++ +Y+
Sbjct: 207 RIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYS 266
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L++G + L+ E+ M P++VTY LI CK +K EAV M +
Sbjct: 267 SLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQ 326
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYN 334
+ P ++ +I+G + + EA F ++ G P T+N
Sbjct: 327 GLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWN 371
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 83/194 (42%), Gaps = 7/194 (3%)
Query: 191 SDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ---NLLRVNEV 247
S F +V L + + A++L +M+ V + G+ + + LRV
Sbjct: 52 SSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHK 111
Query: 248 CREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLG- 306
++ C+ P Y ++ + + + A FY M+E + P+ + LI L
Sbjct: 112 MKDFDCD---PSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCR 168
Query: 307 SDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSR 366
+D +D L+ + + G P++ TY ++ C R+D+A ++ EM + P
Sbjct: 169 NDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVV 228
Query: 367 TYDIILQPDKGSKN 380
TY ++ GSKN
Sbjct: 229 TYTSLINGLCGSKN 242
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 80/198 (40%), Gaps = 7/198 (3%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKV 171
K KG + + ++ +L++ L K + L E M R T K+
Sbjct: 254 KSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKI 313
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+EAVE ++M GLKP+ + K++ C +A D+M G+ P+ ++ I
Sbjct: 314 QEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIH 373
Query: 232 LEGWSQQQNLLRVNEVCR------EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHE 285
++ ++ L N R M+ +V T L+ CK ++ +AV E
Sbjct: 374 VKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDE 433
Query: 286 MQEKNMMPSPHIFSTLIN 303
+ +PS + LI
Sbjct: 434 IVTDGCIPSKGTWKLLIG 451
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 141/318 (44%), Gaps = 37/318 (11%)
Query: 89 LVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMK 148
+V +L++ S +G AL F WA GF HS ++ AL L R+F ++ L+++M
Sbjct: 46 IVRLILDQKSASG--ALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMP 103
Query: 149 QRKLLTRDTXXXXXXXXXXXXK--VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSV 206
L D +K + + + K+G+KP + FN ++DVL K + +
Sbjct: 104 DSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVK-EDI 162
Query: 207 EKAQELFD-KMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGI 265
+ A+E F KM G+ D+ +Y IL++G S + ++ + MK P+ V Y
Sbjct: 163 DIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNT 222
Query: 266 LINAYCKAKKYDEAVGFYHEMQEKN-------------------------------MMPS 294
L++A CK K A EM+E N +P
Sbjct: 223 LLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPD 282
Query: 295 PHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD 354
+ ++ L ++ R+ EALE E+ ++ G + N +V YC +M A R
Sbjct: 283 VVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFI 342
Query: 355 EMKQCGVGPNSRTYDIIL 372
EM++ G PN TY++++
Sbjct: 343 EMERKGYLPNVETYNLLI 360
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 100/213 (46%), Gaps = 2/213 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ +++ EK G P+V K+++VLC V +A E+ +++ +G D+ +
Sbjct: 263 KLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACN 322
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L++G+ + EM+ + + P+V TY +LI YC D A+ +++M+
Sbjct: 323 TLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTD 382
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANG--FAPETPTYNAVVGAYCWSMRMD 347
+ + F+TLI GL R D+ L+ E + + YN V+ + R +
Sbjct: 383 AIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWE 442
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILQPDKGSKN 380
DA + +M++ R++ +I +KG +
Sbjct: 443 DALEFLLKMEKLFPRAVDRSFKLISLCEKGGMD 475
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%)
Query: 187 KPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNE 246
+P FN L+ C + + ++ L +K G VPD+ + T ++E + + E
Sbjct: 245 EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALE 304
Query: 247 VCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLG 306
V ++ + + DVV L+ YC K A F+ EM+ K +P+ ++ LI G
Sbjct: 305 VLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYC 364
Query: 307 SDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
LD AL+ + K + T+N ++ R DD ++++ M+
Sbjct: 365 DVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQ 415
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 102/239 (42%), Gaps = 35/239 (14%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K++ A F +ME+ G P V +N L+ C ++ A + F+ M+ + + ++
Sbjct: 333 KMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFN 392
Query: 230 ILLEGWS---QQQNLLRVNEVCRE--------------------------------MKCE 254
L+ G S + + L++ E+ ++ +K E
Sbjct: 393 TLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKME 452
Query: 255 CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEA 314
P V + + C+ D+ Y +M + +PS + LI+ +++E+
Sbjct: 453 KLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEES 512
Query: 315 LEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
LE G+ P + T+NAV+ +C ++ + + V++M + G P++ +Y+ +L+
Sbjct: 513 LELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLE 571
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 77/174 (44%), Gaps = 4/174 (2%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
++A+E KMEK L P D + + LC+ ++ + +D+M G VP + L
Sbjct: 442 EDALEFLLKMEK--LFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCL 499
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+ +SQ + E+ +M + P T+ +I +CK K + F +M E+
Sbjct: 500 IHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGC 559
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMR 345
+P ++ L+ L + +A + + P+ +++++ +C S +
Sbjct: 560 VPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM--FCLSQK 611
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 145/304 (47%), Gaps = 14/304 (4%)
Query: 91 AEVLNKLSNAGVL--ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWN----LV 144
+ +++ L G + A+S F E KG K S ++++L+ L K + WN L+
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEME-TKGIKSSVVTYNSLVRGLCKAGK----WNDGALLL 286
Query: 145 EDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKS 203
+DM R+++ T K++EA E +++M G+ P + +N L+D C
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 346
Query: 204 KSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTY 263
+ +A + D M PD+ ++T L++G+ + + +V R + + VTY
Sbjct: 347 NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTY 406
Query: 264 GILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKA 323
IL+ +C++ K A + EM ++P + L++GL + +L++ALE +E +
Sbjct: 407 SILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466
Query: 324 NGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQP--DKGSKNP 381
+ Y ++ C +++DA+ + + GV PN TY +++ KGS +
Sbjct: 467 SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 526
Query: 382 RSLL 385
++L
Sbjct: 527 ANIL 530
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 113/222 (50%), Gaps = 7/222 (3%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV EAV ++M + G +P+V +N +V+ +C+S A +L KM R + D+ +Y+
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+++ + + + +EM+ + + VVTY L+ CKA K+++ +M +
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++P+ F+ L++ + +L EA E Y++ G +P TYN ++ YC R+ +A
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 350 YRVVDEMKQCGVGPNSRT-------YDIILQPDKGSKNPRSL 384
++D M + P+ T Y ++ + D G K R++
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 114/236 (48%), Gaps = 14/236 (5%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V + ++ F + K GL ++ LV C+S ++ A+ELF +M G++PD+ +Y
Sbjct: 383 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 442
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
ILL+G L + E+ +++ + +V Y +I CK K ++A + + K
Sbjct: 443 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 502
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ ++ +I+GL L EA K + +G AP TYN ++ A+ + +
Sbjct: 503 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTAS 562
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQP--------------DKGSKNPRSLLGFPENE 391
++++EMK CG ++ + +++ KGSK+ + LL +E
Sbjct: 563 AKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLLELSGSE 618
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 94/199 (47%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A K+ K G +P+ + FN L+ L V +A L D+M G PD+ +Y ++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G + + ++ R+M+ + DV TY +I++ C+ D A+ + EM+ K +
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
S +++L+ GL + ++ + + P T+N ++ + ++ +A +
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 354 DEMKQCGVGPNSRTYDIIL 372
EM G+ PN TY+ ++
Sbjct: 322 KEMITRGISPNIITYNTLM 340
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%)
Query: 207 EKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGIL 266
+ A LF +M +P L ++ ++ + V + C++++ ++ T I+
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 267 INAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGF 326
IN +C+ K A ++ + P F+TLI GL + ++ EA+ ++ NG
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 327 APETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
P+ TYN++V C S A ++ +M++ V + TY I+
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTII 235
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/238 (17%), Positives = 97/238 (40%), Gaps = 35/238 (14%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K +A+ F++M + P + DF++ + ++K + ++ G+ ++ +
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILI---------------------- 267
I++ + + V ++ +EPD T+ LI
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 268 -------------NAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEA 314
N C++ A+ +M+E+N+ +ST+I+ L D +D A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 315 LEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+ +++ + G TYN++V C + + +D ++ +M + PN T++++L
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 51/99 (51%)
Query: 275 KYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYN 334
K D+A+ + EM +PS FS + + K+ + L+F ++ + NG A T N
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 335 AVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
++ +C + AY V+ ++ + G P++ T++ +++
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIK 166
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 143/289 (49%), Gaps = 7/289 (2%)
Query: 86 SPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVE 145
SP V +++ S+ +LA F +A +Q F+HS S LI LG+ R F +I +++
Sbjct: 50 SPTRVQKLIASQSDP-LLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLA 108
Query: 146 DMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSK 204
+ LT + ++ + TF KM ++ P+ N+++DVL +
Sbjct: 109 KHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHR 168
Query: 205 S-VEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTY 263
++KA ELF R G++P+ +SY +L++ + +L ++ +M PDV +Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 264 GILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKA 323
ILI +C+ + + A+ +M K +P TLI GL DE ++ E+ +
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMIS 284
Query: 324 NGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
GF+P N +V +C ++++A VV+ + + G +S T+++++
Sbjct: 285 KGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVI 333
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Query: 259 DVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDK-RLDEALEF 317
++ TY LI Y +AK ++ + +++M E N P P + +++ L S + L +A E
Sbjct: 120 EIFTY--LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFEL 177
Query: 318 YEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
++ + +G P T +YN ++ A+C + + AY++ +M + V P+ +Y I++Q
Sbjct: 178 FKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQ 233
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
F +M + G+ P V +N ++D C S A +L M + + PD+ +++ L+ + +
Sbjct: 33 FTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVK 92
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
++ + E+ +EM P +TY +I+ +CK + D+A M K P
Sbjct: 93 ERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVT 152
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
FSTLING KR+D +E + + G T TY ++ +C +D A +++EM
Sbjct: 153 FSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI 212
Query: 358 QCGVGPNSRTYDIILQPDKGSKNPRSLLGFPEN 390
CGV P+ T+ +L K R E+
Sbjct: 213 SCGVAPDYITFHCMLAGLCSKKELRKAFAILED 245
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 102/193 (52%)
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
M + +K +V +VD LCK + AQ LF +M +G+ P++ +Y +++ +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
+++ R M + PD+VT+ LINA+ K +K EA Y EM ++ P+ +++
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
+I+G R+D+A + + G +P+ T++ ++ YC + R+D+ + EM + G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 361 VGPNSRTYDIILQ 373
+ N+ TY ++
Sbjct: 181 IVANTVTYTTLIH 193
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 97/186 (52%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+A + M + + P++ F+ L++ K + V +A+E++ +M + P +Y ++
Sbjct: 63 DADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMI 122
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+G+ +Q + + M + PDVVT+ LIN YCKAK+ D + + EM + ++
Sbjct: 123 DGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 182
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
+ ++TLI+G LD A + + + G AP+ T++ ++ C + A+ +
Sbjct: 183 ANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 242
Query: 353 VDEMKQ 358
++++++
Sbjct: 243 LEDLQK 248
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV EA E +++M ++ + P +N ++D CK V+ A+ + D M +G PD+ +++
Sbjct: 95 KVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFS 154
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G+ + + + E+ EM + VTY LI+ +C+ D A +EM
Sbjct: 155 TLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISC 214
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFK 322
+ P F ++ GL S K L +A E +
Sbjct: 215 GVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 247
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 88/195 (45%), Gaps = 12/195 (6%)
Query: 106 SFFH---WAEKQKGFKHSTE--------SFHALIEALGKIRQFKVIWNLVEDMKQRKLL- 153
SF H W++ + +H E +F ALI A K R+ + ++M + +
Sbjct: 54 SFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFP 113
Query: 154 TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELF 213
T T +V +A + M G P+V F+ L++ CK+K V+ E+F
Sbjct: 114 TTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 173
Query: 214 DKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKA 273
+M RG+V + +YT L+ G+ Q +L ++ EM PD +T+ ++ C
Sbjct: 174 CEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSK 233
Query: 274 KKYDEAVGFYHEMQE 288
K+ +A ++Q+
Sbjct: 234 KELRKAFAILEDLQK 248
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 104/204 (50%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ K A+E + M+ G+ +V +N L+ LC+S + K L MR R + P+ +Y
Sbjct: 283 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 342
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G+S + +L +++ EM P+ VT+ LI+ + + EA+ ++ M+ K
Sbjct: 343 TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAK 402
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ PS + L++GL + D A FY + K NG TY ++ C + +D+A
Sbjct: 403 GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 462
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
+++EM + G+ P+ TY ++
Sbjct: 463 VVLLNEMSKDGIDPDIVTYSALIN 486
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 99/202 (49%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
KEA++ F ME GL P + L+D LCK+ + A+ + +M+ G+ +YT +
Sbjct: 390 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 449
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++G + L + EM + +PD+VTY LIN +CK ++ A + +
Sbjct: 450 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 509
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P+ I+STLI L EA+ YE G + T+N +V + C + ++ +A
Sbjct: 510 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 569
Query: 352 VVDEMKQCGVGPNSRTYDIILQ 373
+ M G+ PN+ ++D ++
Sbjct: 570 FMRCMTSDGILPNTVSFDCLIN 591
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 101/195 (51%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
++M K + P+V+ FN L++VLC S EK+ L KM G P + +Y +L + +
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ E+ MK + + DV TY +LI+ C++ + + +M+++ + P+
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 340
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
++TLING ++ ++ A + + + G +P T+NA++ + +A ++ M+
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 400
Query: 358 QCGVGPNSRTYDIIL 372
G+ P+ +Y ++L
Sbjct: 401 AKGLTPSEVSYGVLL 415
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 117/278 (42%), Gaps = 2/278 (0%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXX 162
AL F+ E KG S S+ L++ L K +F + MK+ + + R T
Sbjct: 392 ALKMFYMME-AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 450
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
+ EAV +M K G+ P++ ++ L++ CK + A+E+ ++ GL
Sbjct: 451 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 510
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
P+ Y+ L+ + L + M E D T+ +L+ + CKA K EA F
Sbjct: 511 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 570
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
M ++P+ F LING G+ +A +++ G P TY +++ C
Sbjct: 571 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 630
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIILQPDKGSKN 380
+ +A + + + ++ Y+ +L S N
Sbjct: 631 GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGN 668
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 94/202 (46%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+++++E F M YG P V N ++ + KS +M R + PD+ ++ I
Sbjct: 179 IQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNI 238
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ + + + + + ++M+ + P +VTY +++ YCK ++ A+ M+ K
Sbjct: 239 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 298
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ ++ LI+ L R+ + + P TYN ++ + ++ A
Sbjct: 299 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIAS 358
Query: 351 RVVDEMKQCGVGPNSRTYDIIL 372
++++EM G+ PN T++ ++
Sbjct: 359 QLLNEMLSFGLSPNHVTFNALI 380
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 100/240 (41%), Gaps = 36/240 (15%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV EA E M G+ P F+ L++ S KA +FD+M G P +Y
Sbjct: 563 KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYG 622
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
LL+G + +L + + + D V Y L+ A CK+ +AV + EM ++
Sbjct: 623 SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 682
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEK---------------------FKAN---- 324
+++P + +++LI+GL + A+ F ++ FKA
Sbjct: 683 SILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 742
Query: 325 -----------GFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
G P+ T NA++ Y +++ ++ EM GPN TY+I+L
Sbjct: 743 GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH 802
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+KEA+ +E M G + FN LV LCK+ V +A+E M G++P+ S+
Sbjct: 529 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 588
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ G+ L+ V EM P TYG L+ CK EA F +
Sbjct: 589 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 648
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
+++TL+ + L +A+ + + P++ TY +++ C
Sbjct: 649 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC 699
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 85/186 (45%), Gaps = 2/186 (1%)
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEV 247
P V D L+ V + ++ + E+F M G P + + +L + + V
Sbjct: 163 PSVYDI--LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 220
Query: 248 CREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGS 307
+EM PDV T+ ILIN C ++++ +M++ P+ ++T+++
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280
Query: 308 DKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
R A+E + K+ G + TYN ++ C S R+ Y ++ +M++ + PN T
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 340
Query: 368 YDIILQ 373
Y+ ++
Sbjct: 341 YNTLIN 346
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 93/197 (47%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
K + E+M+ G P++ N ++D + +EK +L +M ++ P+L +Y IL
Sbjct: 741 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 800
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
L G+S+++++ + R + PD +T L+ C++ + + + +
Sbjct: 801 LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGV 860
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
+ F+ LI+ ++ ++ A + + + G + + T +A+V + R ++
Sbjct: 861 EVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRM 920
Query: 352 VVDEMKQCGVGPNSRTY 368
V+ EM + G+ P SR Y
Sbjct: 921 VLHEMSKQGISPESRKY 937
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 108/256 (42%), Gaps = 4/256 (1%)
Query: 121 TESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETF-- 178
T ++ L+ A+ K +L +M QR +L D+ K K +
Sbjct: 653 TVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP-DSYTYTSLISGLCRKGKTVIAILFA 711
Query: 179 -EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
E + + P + VD + K+ + ++M + G PD+ + +++G+S+
Sbjct: 712 KEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSR 771
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ + N++ EM + P++ TY IL++ Y K K + Y + ++P
Sbjct: 772 MGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT 831
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
+L+ G+ L+ L+ + F G + T+N ++ C + ++ A+ +V M
Sbjct: 832 CHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMT 891
Query: 358 QCGVGPNSRTYDIILQ 373
G+ + T D ++
Sbjct: 892 SLGISLDKDTCDAMVS 907
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 91/204 (44%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ A + + M G+ + + +V VL ++ ++++ + +M +G+ P+ + Y
Sbjct: 879 EINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYI 938
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G + ++ V EM P V ++ A K K DEA M +
Sbjct: 939 GLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKM 998
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++P+ F+TL++ + + EALE G + +YN ++ C M A
Sbjct: 999 KLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALA 1058
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
+ + +EMK G N+ TY +++
Sbjct: 1059 FELYEEMKGDGFLANATTYKALIR 1082
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 101/194 (52%)
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
++M + G+ P L++ CK V +A + M +G++ D K+YT+L+ G +
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
+ E+ REM+ + PDV +YG+LIN + K +A + EM E+ + P+ I+
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
+ L+ G +++A E ++ G P TY ++ YC S + +A+R+ DEMK
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL 725
Query: 359 CGVGPNSRTYDIIL 372
G+ P+S Y ++
Sbjct: 726 KGLVPDSFVYTTLV 739
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 112/250 (44%), Gaps = 1/250 (0%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKE-A 174
G ++ LI+ L K R LV +M + + V E A
Sbjct: 307 GVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKA 366
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
F+ M GL P+ + L++ C+ K+V + EL +M+ R +V +Y +++G
Sbjct: 367 KALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKG 426
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
+L + +EM P+VV Y LI + + ++ +A+ EM+E+ + P
Sbjct: 427 MCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD 486
Query: 295 PHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD 354
+++LI GL KR+DEA F + NG P TY A + Y + A + V
Sbjct: 487 IFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVK 546
Query: 355 EMKQCGVGPN 364
EM++CGV PN
Sbjct: 547 EMRECGVLPN 556
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 98/184 (53%), Gaps = 3/184 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV EA + M G+ + + L++ L K+ V+ A+E+F +MR +G+ PD+ SY
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L+ G+S+ N+ + + + EM E P+V+ Y +L+ +C++ + ++A EM K
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ + T+I+G L EA +++ K G P++ Y +V C R++D
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC---RLNDV 748
Query: 350 YRVV 353
R +
Sbjct: 749 ERAI 752
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 107/204 (52%), Gaps = 2/204 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ +A+ ++M++ G+ P++ +N L+ L K+K +++A+ +M GL P+ +Y
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCEC-FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
+ G+ + ++ +EM+ EC P+ V LIN YCK K EA Y M +
Sbjct: 527 AFISGYIEASEFASADKYVKEMR-ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVD 585
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
+ ++ ++ L+NGL + ++D+A E + + + G AP+ +Y ++ + M
Sbjct: 586 QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQK 645
Query: 349 AYRVVDEMKQCGVGPNSRTYDIIL 372
A + DEM + G+ PN Y+++L
Sbjct: 646 ASSIFDEMVEEGLTPNVIIYNMLL 669
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 119/255 (46%), Gaps = 1/255 (0%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKE 173
KG ++ LI+ L KI++ + +L+ +M + L T
Sbjct: 271 KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADA 330
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A +M +G+ + ++ + V+ K +EKA+ LFD M GL+P ++Y L+E
Sbjct: 331 AKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE 390
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+ +++N+ + E+ EMK TYG ++ C + D A EM P
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP 450
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ I++TLI + R +A+ ++ K G AP+ YN+++ + RMD+A +
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 354 DEMKQCGVGPNSRTY 368
EM + G+ PN+ TY
Sbjct: 511 VEMVENGLKPNAFTY 525
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 104/225 (46%), Gaps = 38/225 (16%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++++A E ++M GL P + ++D CKS + +A LFD+M+ +GLVPD YT
Sbjct: 677 EIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYT 736
Query: 230 ILLEGWSQQQNLLR----------------------VNEVCR----EMKCECF------- 256
L++G + ++ R +N V + E+K E
Sbjct: 737 TLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS 796
Query: 257 -----EPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRL 311
+P+ VTY I+I+ CK + A +H+MQ N+MP+ +++L+NG R
Sbjct: 797 FDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRR 856
Query: 312 DEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM 356
E +++ A G P+ Y+ ++ A+ A +VD+M
Sbjct: 857 AEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 96/207 (46%), Gaps = 5/207 (2%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+++A F++M + GL P V +N L+ C+S +EKA+EL D+M +GL P+ +Y
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+++G+ + +L + EMK + PD Y L++ C+ + A+ + +K
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKG 761
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGF----APETPTYNAVVGAYCWSMRM 346
S F+ LIN + + + E + F P TYN ++ C +
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821
Query: 347 DDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+ A + +M+ + P TY +L
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLN 848
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 87/203 (42%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V A++ E M GL P ++ L+D LCK K +E A+ L +M G+ D +Y++
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++G + +N + EM Y I K ++A + M
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
++P +++LI G +K + + E + K TY VV C S +D AY
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437
Query: 351 RVVDEMKQCGVGPNSRTYDIILQ 373
+V EM G PN Y +++
Sbjct: 438 NIVKEMIASGCRPNVVIYTTLIK 460
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 141/346 (40%), Gaps = 42/346 (12%)
Query: 79 ADLSVEVSPELVAEVL-NKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQF 137
++LS+E++PE+V VL +K + LSFF+W + QK + +SF L L F
Sbjct: 54 SNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSF 113
Query: 138 KVIWNLVEDMKQRKL--------LTR----------DTXXXXXXXXXXXXK--VKEAVET 177
+ ++VE M +R + R D K ++EAV
Sbjct: 114 EKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFV 173
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
F L P +S L+D L + ++ +++ M R +V D+K+Y +L+ +
Sbjct: 174 FSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCR 233
Query: 238 QQNL------------------LRVNEVCR---EMKCECFEPDVVTYGILINAYCKAKKY 276
N+ L V+ + M C+ P TY +LI+ CK K+
Sbjct: 234 AGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRL 293
Query: 277 DEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAV 336
++A EM + H +S LI+GL + D A + ++G + Y+
Sbjct: 294 EDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCC 353
Query: 337 VGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQPDKGSKNPR 382
+ M+ A + D M G+ P ++ Y +++ KN R
Sbjct: 354 ICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 81/169 (47%)
Query: 205 SVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYG 264
+V+ A +L + M +GLVP +Y +L++G + + L + EM D TY
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYS 316
Query: 265 ILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKAN 324
+LI+ K + D A G HEM + P+++ I + + +++A ++ A+
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS 376
Query: 325 GFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
G P+ Y +++ YC + Y ++ EMK+ + + TY +++
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 80/167 (47%), Gaps = 6/167 (3%)
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
+++G KP +N ++D LCK ++E A+ELF +M++ L+P + +YT LL G+ +
Sbjct: 798 DRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRR 856
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP-----SPH 296
+ V E EPD + Y ++INA+ K +A+ +M KN + S
Sbjct: 857 AEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSIS 916
Query: 297 IFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWS 343
L++G ++ A + E + P++ T ++ C S
Sbjct: 917 TCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCIS 963
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 97/255 (38%), Gaps = 43/255 (16%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELF----------------- 213
+ EA F++M+ GL P+ + LVD C+ VE+A +F
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNAL 772
Query: 214 ---------------------DKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK 252
D R P+ +Y I+++ ++ NL E+ +M+
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832
Query: 253 CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD 312
P V+TY L+N Y K + E + E + P ++S +IN +
Sbjct: 833 NANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTT 892
Query: 313 EALEFYEKFKA-----NGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
+AL ++ A +G T A++ + M+ A +V++ M + P+S T
Sbjct: 893 KALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSAT 952
Query: 368 YDIILQPDKGSKNPR 382
++ S N R
Sbjct: 953 VIELINESCISSNQR 967
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 130/264 (49%), Gaps = 1/264 (0%)
Query: 110 WAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXX 168
+A + +G S++S L++ L K +QF+V N+ ++ + ++
Sbjct: 133 FALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKL 192
Query: 169 XKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
V + +E F +M+ + P V +N L+D LCK K + A++LFD+M R L+P L +Y
Sbjct: 193 SDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITY 252
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
L++G+ + N + +V MK + EP ++T+ L+ KA ++A EM++
Sbjct: 253 NTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKD 312
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
+P FS L +G S+++ + AL YE +G T + ++ A C +++
Sbjct: 313 LGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEK 372
Query: 349 AYRVVDEMKQCGVGPNSRTYDIIL 372
A ++ G+ PN Y+ ++
Sbjct: 373 AEEILGREMAKGLVPNEVIYNTMI 396
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 109/195 (55%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
E MEK G+KP+ +N L+ C+ +E A++ +KM+ +G+ P +++Y IL+ G+ +
Sbjct: 412 IEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGR 471
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ + ++ +EM+ P+VV+YG LIN CK K EA +M+++ + P I
Sbjct: 472 KYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRI 531
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
++ LI+G S ++++A F ++ G TYN ++ + ++ +A ++ E+
Sbjct: 532 YNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEIS 591
Query: 358 QCGVGPNSRTYDIIL 372
+ G+ P+ TY+ ++
Sbjct: 592 RKGLKPDVFTYNSLI 606
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 120/251 (47%), Gaps = 1/251 (0%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKM 181
+F+ L++ L K + N++++MK + T K + A+ +E
Sbjct: 286 TFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETA 345
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
G+K + L++ LCK +EKA+E+ + +GLVP+ Y +++G+ ++ +L
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
+ M+ + +PD + Y LI +C+ + + A ++M+ K + PS ++ L
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNIL 465
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
I G G D+ + ++ + NG P +Y ++ C ++ +A V +M+ GV
Sbjct: 466 IGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGV 525
Query: 362 GPNSRTYDIIL 372
P R Y++++
Sbjct: 526 SPKVRIYNMLI 536
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+++A E + GL P +N ++D C+ + A+ + M +G+ PD +Y
Sbjct: 369 KIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYN 428
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ + + + + +MK + P V TY ILI Y + ++D+ EM++
Sbjct: 429 CLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDN 488
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
MP+ + TLIN L +L EA + G +P+ YN ++ C +++DA
Sbjct: 489 GTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDA 548
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
+R EM + G+ N TY+ ++
Sbjct: 549 FRFSKEMLKKGIELNLVTYNTLI 571
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 104/204 (50%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ +A + F++M L P + +N L+D CK+ + EK+ ++ ++M+ + P L ++
Sbjct: 229 RMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFN 288
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
LL+G + + V +EMK F PD T+ IL + Y +K + A+G Y +
Sbjct: 289 TLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDS 348
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ + + S L+N L + ++++A E + A G P YN ++ YC + A
Sbjct: 349 GVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA 408
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
++ M++ G+ P+ Y+ +++
Sbjct: 409 RMKIEAMEKQGMKPDHLAYNCLIR 432
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 116/262 (44%), Gaps = 7/262 (2%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKV 171
K KG S E+++ LI G+ +F ++++++M+ + + K+
Sbjct: 451 KLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKL 510
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
EA ME G+ P+V +N L+D C +E A +M +G+ +L +Y L
Sbjct: 511 LEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTL 570
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++G S L ++ E+ + +PDV TY LI+ Y A + Y EM+ +
Sbjct: 571 IDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI 630
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEK-FKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P+ + LI+ E +E E+ F P+ YN V+ Y M+ A+
Sbjct: 631 KPTLKTYHLLISLCTK-----EGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAF 685
Query: 351 RVVDEMKQCGVGPNSRTYDIIL 372
+ +M + +G + TY+ ++
Sbjct: 686 NLQKQMIEKSIGLDKTTYNSLI 707
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 100/219 (45%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ EA + F + G+ P L+D L K+K +F + P Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++ + ++ + E+ MK + P V Y +LI+ CK K+ ++A + EM +
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
++PS ++TLI+G +++ + E+ KA+ P T+N ++ + ++DA
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 351 RVVDEMKQCGVGPNSRTYDIILQPDKGSKNPRSLLGFPE 389
V+ EMK G P++ T+ I+ ++ + LG E
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYE 343
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 92/191 (48%), Gaps = 4/191 (2%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ EA + ++ + GLKP+V +N L+ + +V++ L+++M+ G+ P LK+Y
Sbjct: 579 KLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH 638
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L+ ++ + + EM +PD++ Y +++ Y ++A +M EK
Sbjct: 639 LLI-SLCTKEGIELTERLFGEMS---LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEK 694
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++ +++LI G +L E ++ A PE TYN +V +C A
Sbjct: 695 SIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSA 754
Query: 350 YRVVDEMKQCG 360
Y EM++ G
Sbjct: 755 YVWYREMQEKG 765
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 96/221 (43%), Gaps = 10/221 (4%)
Query: 95 NKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLT 154
KLS A L L +KG K ++++LI G + L E+MK+ +
Sbjct: 578 GKLSEAEDLLLEI-----SRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI-- 630
Query: 155 RDTXXXXXXXXXXXXKVKEAVETFEKM-EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELF 213
KE +E E++ + LKP++ +N ++ +EKA L
Sbjct: 631 --KPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQ 688
Query: 214 DKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKA 273
+M + + D +Y L+ G + L V + EM EP+ TY I++ +C+
Sbjct: 689 KQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEV 748
Query: 274 KKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEA 314
K Y A +Y EMQEK + I + L++GL + R EA
Sbjct: 749 KDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEA 789
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 72/183 (39%), Gaps = 35/183 (19%)
Query: 199 VLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEP 258
+L +SK + +A +LF +R+ G+ P S T+LL+
Sbjct: 118 LLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHL----------------------- 154
Query: 259 DVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFY 318
K K++ + + + E + PS ++ I + + LE +
Sbjct: 155 ------------VKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELF 202
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQPDKGS 378
+ K + P YN ++ C RM+DA ++ DEM + P+ TY+ ++ +
Sbjct: 203 NRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKA 262
Query: 379 KNP 381
NP
Sbjct: 263 GNP 265
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 120/258 (46%), Gaps = 1/258 (0%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXK-VKEA 174
GF+ S + +L+ + +F+ +LV+ M + + + A
Sbjct: 144 GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNA 203
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
+E F MEK G++ + +N L+ L S A L M R + P++ +T L++
Sbjct: 204 LEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 263
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
+ ++ NLL + +EM P+V TY LIN +C +A + M K P
Sbjct: 264 FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD 323
Query: 295 PHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD 354
++TLI G KR+++ ++ + + G + TYN ++ YC + +++ A +V +
Sbjct: 324 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 383
Query: 355 EMKQCGVGPNSRTYDIIL 372
M CGV P+ TY+I+L
Sbjct: 384 RMVDCGVSPDIVTYNILL 401
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 105/204 (51%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ +EAV + M+ +G P V +N +++ LCK++ + A E+F M +G+ D +Y
Sbjct: 164 RFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYN 223
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G S + R+M +P+V+ + LI+ + K EA Y EM +
Sbjct: 224 TLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR 283
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+++P+ +++LING L +A ++ + G P+ TYN ++ +C S R++D
Sbjct: 284 SVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDG 343
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
++ EM G+ ++ TY+ ++
Sbjct: 344 MKLFCEMTYQGLVGDAFTYNTLIH 367
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 95/201 (47%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+A F+ M G P+V +N L+ CKSK VE +LF +M ++GLV D +Y L+
Sbjct: 307 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 366
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G+ Q L +V M PD+VTY IL++ C K ++A+ ++Q+ M
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 426
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
++ +I GL +L EA + G P+ Y ++ C +A ++
Sbjct: 427 VDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 486
Query: 353 VDEMKQCGVGPNSRTYDIILQ 373
MK+ G P+ R YD L+
Sbjct: 487 CRRMKEDGFMPSERIYDETLR 507
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 98/195 (50%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K +A F +M + P + DF +++ V+ K + L+ KM + G+ DL S+T
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL+ + + L + +M F P +VT G L+N +C+ ++ EAV M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+P+ I++T+INGL ++ L+ ALE + + G + TYN ++ S R DA
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 350 YRVVDEMKQCGVGPN 364
R++ +M + + PN
Sbjct: 239 ARLLRDMVKRKIDPN 253
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 132/282 (46%), Gaps = 4/282 (1%)
Query: 81 LSVEVSPELVA--EVLNKLSNAGVLALSFFHWAEKQKGFKHSTE-SFHALIEALGKIRQF 137
L V+P+L VL L+ G+ S AE + G E ++ +L+ A ++
Sbjct: 516 LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEI 575
Query: 138 KVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKV-KEAVETFEKMEKYGLKPEVSDFNKL 196
++ +L E++ + R + EA F ++++ G P+++ N +
Sbjct: 576 GLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSM 635
Query: 197 VDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECF 256
V + + + V KA + D M+ RG P + +Y L+ S+ + + E+ RE+ +
Sbjct: 636 VSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGI 695
Query: 257 EPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALE 316
+PD+++Y +I AYC+ + +A + EM+ ++P ++T I +D +EA+
Sbjct: 696 KPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIG 755
Query: 317 FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
+G P TYN++V YC R D+A V++++
Sbjct: 756 VVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRN 797
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 128/275 (46%), Gaps = 4/275 (1%)
Query: 103 LALSFFHWAEKQKGFKHSTES--FHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXX 159
LAL F W KQK ++ ++ +I LGK + N+ +++ L +
Sbjct: 153 LALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYT 212
Query: 160 XXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKS-VEKAQELFDKMRH 218
+ +EAV F+KME+ G KP + +N +++V K + K L +KM+
Sbjct: 213 SLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKS 272
Query: 219 RGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDE 278
G+ PD +Y L+ + +V EMK F D VTY L++ Y K+ + E
Sbjct: 273 DGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE 332
Query: 279 AVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVG 338
A+ +EM PS +++LI+ D LDEA+E + G P+ TY ++
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 339 AYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+ + +++ A + +EM+ G PN T++ ++
Sbjct: 393 GFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIK 427
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 95/201 (47%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
KEA++ +M G P + +N L+ + +++A EL ++M +G PD+ +YT L
Sbjct: 331 KEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTL 390
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
L G+ + + + EM+ +P++ T+ I Y K+ E + + E+ +
Sbjct: 391 LSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGL 450
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P ++TL+ G + E +++ K GF PE T+N ++ AY + A
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510
Query: 352 VVDEMKQCGVGPNSRTYDIIL 372
V M GV P+ TY+ +L
Sbjct: 511 VYRRMLDAGVTPDLSTYNTVL 531
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 121/265 (45%), Gaps = 7/265 (2%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQ----FKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXX 168
K GF + +++AL++ GK + KV+ +V + ++T ++
Sbjct: 306 KAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGM- 364
Query: 169 XKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
+ EA+E +M + G KP+V + L+ ++ VE A +F++MR+ G P++ ++
Sbjct: 365 --LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTF 422
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
++ + + + ++ E+ PD+VT+ L+ + + E G + EM+
Sbjct: 423 NAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 482
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
+P F+TLI+ ++A+ Y + G P+ TYN V+ A +
Sbjct: 483 AGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQ 542
Query: 349 AYRVVDEMKQCGVGPNSRTYDIILQ 373
+ +V+ EM+ PN TY +L
Sbjct: 543 SEKVLAEMEDGRCKPNELTYCSLLH 567
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 135/284 (47%), Gaps = 5/284 (1%)
Query: 93 VLNKLSNAGVL--ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQ-FKVIWNLVEDMKQ 149
+++ +N+G A++ F E + G K + +++ ++ GK+ + I +LVE MK
Sbjct: 214 LISAFANSGRYREAVNVFKKME-EDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKS 272
Query: 150 RKLLTRDTXXXXXXXXXXXXKV-KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEK 208
+ + +EA + FE+M+ G + +N L+DV KS ++
Sbjct: 273 DGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE 332
Query: 209 AQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILIN 268
A ++ ++M G P + +Y L+ +++ L E+ +M + +PDV TY L++
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 269 AYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAP 328
+ +A K + A+ + EM+ P+ F+ I G+ + E ++ +++ G +P
Sbjct: 393 GFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP 452
Query: 329 ETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+ T+N ++ + + + V EMK+ G P T++ ++
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLI 496
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 132/290 (45%), Gaps = 18/290 (6%)
Query: 93 VLNKLSNAGVL--ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMK-- 148
+L+ AG + A+S F + G K + +F+A I+ G +F + + +++
Sbjct: 390 LLSGFERAGKVESAMSIFE-EMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVC 448
Query: 149 --QRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSV 206
++T +T +V F++M++ G PE FN L+ + S
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSG---VFKEMKRAGFVPERETFNTLISAYSRCGSF 505
Query: 207 EKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGIL 266
E+A ++ +M G+ PDL +Y +L ++ + +V EM+ +P+ +TY L
Sbjct: 506 EQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 565
Query: 267 INAYCKAKKYDEAVGFYHEMQEK----NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFK 322
++AY K+ +G H + E+ + P + TL+ L EA + + K
Sbjct: 566 LHAYANGKE----IGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELK 621
Query: 323 ANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
GF+P+ T N++V Y + A V+D MK+ G P+ TY+ ++
Sbjct: 622 ERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGS-DKRLDEA 314
F DV +Y LI+A+ + +Y EAV + +M+E P+ ++ ++N G ++
Sbjct: 204 FSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKI 263
Query: 315 LEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQP 374
EK K++G AP+ TYN ++ +A +V +EMK G + TY+ +L
Sbjct: 264 TSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDV 323
Query: 375 DKGSKNPRSLL 385
S P+ +
Sbjct: 324 YGKSHRPKEAM 334
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 133/305 (43%), Gaps = 37/305 (12%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTX-XXXX 162
ALS FH + + GF+H S+ +LI L K R F + ++ ++ R + R++
Sbjct: 65 ALSLFHQYQ-EMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLI 123
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
V +A++ F K+ + + N L++VL + +EKA+ FD + L
Sbjct: 124 QHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLR 183
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTY------------------- 263
P+ S+ IL++G+ + + +V EM +P VVTY
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSL 243
Query: 264 ----------------GILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGS 307
G+L+ C +Y+EA +M+ + P + L++ LG
Sbjct: 244 LEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGK 303
Query: 308 DKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
R+DEA + K P+ YN +V C R+ +AYRV+ EM+ G PN+ T
Sbjct: 304 RGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAAT 363
Query: 368 YDIIL 372
Y +++
Sbjct: 364 YRMMI 368
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 93/183 (50%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A + F++M + ++P V +N L+ LC++ + KA+ L + M + + P+ ++ +L++
Sbjct: 205 ACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMK 264
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G + ++ +M+ +P +V YGIL++ K + DEA EM+++ + P
Sbjct: 265 GLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKP 324
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
I++ L+N L ++ R+ EA + + G P TY ++ +C D V+
Sbjct: 325 DVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVL 384
Query: 354 DEM 356
+ M
Sbjct: 385 NAM 387
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 115/270 (42%), Gaps = 10/270 (3%)
Query: 93 VLNKLSNAGVL--ALSFFHWAEKQKGFKHSTESFHALIEA-LGKI---RQFKVIWNLVED 146
++N L + G L A SFF A+ + + ++ SF+ LI+ L K KV ++E
Sbjct: 157 LINVLVDNGELEKAKSFFDGAKDMR-LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEM 215
Query: 147 MKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSV 206
Q ++T ++ K K +E M K ++P F L+ LC
Sbjct: 216 EVQPSVVTYNSLIGFLCRNDDMGKAKSLLED---MIKKRIRPNAVTFGLLMKGLCCKGEY 272
Query: 207 EKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGIL 266
+A++L M +RG P L +Y IL+ ++ + + EMK +PDVV Y IL
Sbjct: 273 NEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNIL 332
Query: 267 INAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGF 326
+N C + EA EMQ K P+ + +I+G + D L A+
Sbjct: 333 VNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRH 392
Query: 327 APETPTYNAVVGAYCWSMRMDDAYRVVDEM 356
P T+ +V +D A V++ M
Sbjct: 393 CPTPATFVCMVAGLIKGGNLDHACFVLEVM 422
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 98/203 (48%), Gaps = 2/203 (0%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+EA+ F + ++ G + + ++ L+ L KS++ + ++ +R+R + + L
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 232 LEGWSQQQNLLRVNEVCREMKC-ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++ + + ++ + +V ++ +C + + LIN + ++A F+ ++
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRT-IQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ P+ F+ LI G + A + +++ P TYN+++G C + M A
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 351 RVVDEMKQCGVGPNSRTYDIILQ 373
++++M + + PN+ T+ ++++
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMK 264
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 99/188 (52%)
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
M K G V + N L+ LC++ KA L +MR L+PD+ SY ++ G+ + +
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
L + E+ EMK +VT+GILI+A+CKA K DEA+GF EM+ + ++++
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
LI G LD +++ G +P TYN ++ +C ++ +A + + M + G
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 361 VGPNSRTY 368
V PN TY
Sbjct: 313 VRPNVYTY 320
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+AV +M + L P+V +N ++ C+ K +EKA EL ++M+ G L ++ IL+
Sbjct: 160 KAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILI 219
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ + + + +EMK E D+V Y LI +C + D + E+ E+
Sbjct: 220 DAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDS 279
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P ++TLI G +L EA E +E G P TY ++ C + +A ++
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339
Query: 353 VDEMKQCGVGPNSRTYDIILQ 373
++ M + PN+ TY+II+
Sbjct: 340 LNLMIEKDEEPNAVTYNIIIN 360
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 125/273 (45%), Gaps = 7/273 (2%)
Query: 101 GVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXX 160
GVLAL ++GF + + + L++ L + + +L+ +M++ L+
Sbjct: 128 GVLALML------KRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYN 181
Query: 161 XXXXXXXXXK-VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHR 219
K +++A+E +M+ G + + L+D CK+ +++A +M+
Sbjct: 182 TVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFM 241
Query: 220 GLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEA 279
GL DL YT L+ G+ L R + E+ P +TY LI +CK + EA
Sbjct: 242 GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301
Query: 280 VGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
+ M E+ + P+ + ++ LI+GL + EAL+ P TYN ++
Sbjct: 302 SEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINK 361
Query: 340 YCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
C + DA +V+ MK+ P++ TY+I+L
Sbjct: 362 LCKDGLVADAVEIVELMKKRRTRPDNITYNILL 394
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ EA+ ++M+ GL+ ++ + L+ C +++ + LFD++ RG P +Y
Sbjct: 227 KMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYN 286
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G+ + L +E+ M P+V TY LI+ C K EA+ + M EK
Sbjct: 287 TLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK 346
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ ++ +IN L D + +A+E E K P+ TYN ++G C +D+A
Sbjct: 347 DEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEA 406
Query: 350 YRVV 353
+++
Sbjct: 407 SKLL 410
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 2/201 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++KEA E FE M + G++P V + L+D LC ++A +L + M + P+ +Y
Sbjct: 297 QLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYN 356
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
I++ + + E+ MK PD +TY IL+ C DEA + M +
Sbjct: 357 IIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKD 416
Query: 290 NMMPSPHIFS--TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
+ P + S LI+GL + RL +AL+ Y+ A + T N ++ + + ++
Sbjct: 417 SSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVN 476
Query: 348 DAYRVVDEMKQCGVGPNSRTY 368
A + ++ + NS TY
Sbjct: 477 KAMELWKQISDSKIVRNSDTY 497
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 1/175 (0%)
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
KM L+P V D+N L+ LCK S+++A LF++M+ PD+ S+ I+++G +
Sbjct: 519 KMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAG 578
Query: 240 NLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
++ + M PD+ TY LIN + K DEA+ F+ +M + P HI
Sbjct: 579 DIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICD 638
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC-WSMRMDDAYRVV 353
+++ S D+ E +K + V+ C S MD A R++
Sbjct: 639 SVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLL 693
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 97/205 (47%), Gaps = 2/205 (0%)
Query: 170 KVKEAVETFEKM-EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
++ +A++ ++ + EK G V+ N L++ K+ V KA EL+ ++ +V + +Y
Sbjct: 439 RLHQALDIYDLLVEKLGAGDRVTT-NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTY 497
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
T +++G+ + L + +M+ +P V Y L+++ CK D+A + EMQ
Sbjct: 498 TAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQR 557
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
N P F+ +I+G + A G +P+ TY+ ++ + +D+
Sbjct: 558 DNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDE 617
Query: 349 AYRVVDEMKQCGVGPNSRTYDIILQ 373
A D+M G P++ D +L+
Sbjct: 618 AISFFDKMVDSGFEPDAHICDSVLK 642
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 6/224 (2%)
Query: 123 SFHALIEALGK---IRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFE 179
S++ALI L K + Q I++L+ +++ R T V +A+E ++
Sbjct: 426 SYNALIHGLCKENRLHQALDIYDLL--VEKLGAGDRVTTNILLNSTLKAGDVNKAMELWK 483
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
++ + + ++D CK+ + A+ L KMR L P + Y LL ++
Sbjct: 484 QISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEG 543
Query: 240 NLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
+L + + EM+ + PDVV++ I+I+ KA A M + P +S
Sbjct: 544 SLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYS 603
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWS 343
LIN LDEA+ F++K +GF P+ ++V+ YC S
Sbjct: 604 KLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL-KYCIS 646
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 87/181 (48%)
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEV 247
P+V +N L+ LCK + +A +++D + + D + ILL + ++ + E+
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL 481
Query: 248 CREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGS 307
+++ + TY +I+ +CK + A G +M+ + PS ++ L++ L
Sbjct: 482 WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCK 541
Query: 308 DKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
+ LD+A +E+ + + P+ ++N ++ + + A ++ M + G+ P+ T
Sbjct: 542 EGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFT 601
Query: 368 Y 368
Y
Sbjct: 602 Y 602
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 112/215 (52%), Gaps = 4/215 (1%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ A+ TF++M G++P+ +N L+D CK A+E+F+ M RG +P +Y I
Sbjct: 460 LDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNI 519
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++ + Q+ + + +MK + P+VVT+ L++ Y K+ ++++A+ EM+
Sbjct: 520 MINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG 579
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ PS +++ LIN ++A+ + ++G P N+++ A+ R +A+
Sbjct: 580 LKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAF 639
Query: 351 RVVDEMKQCGVGPNSRTYDIILQP----DKGSKNP 381
V+ MK+ GV P+ TY +++ DK K P
Sbjct: 640 AVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVP 674
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 122/261 (46%), Gaps = 1/261 (0%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKV 171
+Q G K T +++AL++ K K ++V +M++R + + T +
Sbjct: 331 RQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRW 390
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+ A ++ME ++P F++L+ +K ++ +M+ G+ PD + Y ++
Sbjct: 391 ESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVV 450
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++ + + L M E EPD VT+ LI+ +CK ++ A + M+ +
Sbjct: 451 IDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGC 510
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
+P ++ +IN G +R D+ K K+ G P T+ +V Y S R +DA
Sbjct: 511 LPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIE 570
Query: 352 VVDEMKQCGVGPNSRTYDIIL 372
++EMK G+ P+S Y+ ++
Sbjct: 571 CLEEMKSVGLKPSSTMYNALI 591
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 95/193 (49%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
++ + ++M+ G+KP+ +N ++D K ++ A FD+M G+ PD ++ L
Sbjct: 426 QKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTL 485
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++ + + E+ M+ P TY I+IN+Y +++D+ +M+ + +
Sbjct: 486 IDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGI 545
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
+P+ +TL++ G R ++A+E E+ K+ G P + YNA++ AY + A
Sbjct: 546 LPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVN 605
Query: 352 VVDEMKQCGVGPN 364
M G+ P+
Sbjct: 606 AFRVMTSDGLKPS 618
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 95/200 (47%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+A++ + GL + + ++ L S +A+ LF+++R G+ P ++Y LL
Sbjct: 287 KALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALL 346
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+G+ + L + EM+ PD TY +LI+AY A +++ A EM+ ++
Sbjct: 347 KGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQ 406
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ +FS L+ G + + ++ K+ G P+ YN V+ + +D A
Sbjct: 407 PNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT 466
Query: 353 VDEMKQCGVGPNSRTYDIIL 372
D M G+ P+ T++ ++
Sbjct: 467 FDRMLSEGIEPDRVTWNTLI 486
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 97/200 (48%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA FE++ + G+KP +N L+ K+ ++ A+ + +M RG+ PD +Y++L+
Sbjct: 322 EAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLI 381
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ + V +EM+ +P+ + L+ + ++ + EM+ +
Sbjct: 382 DAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVK 441
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P ++ +I+ G LD A+ +++ + G P+ T+N ++ +C R A +
Sbjct: 442 PDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEM 501
Query: 353 VDEMKQCGVGPNSRTYDIIL 372
+ M++ G P + TY+I++
Sbjct: 502 FEAMERRGCLPCATTYNIMI 521
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 94/199 (47%), Gaps = 4/199 (2%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
E F +K L P +N L+ ++ +EKA L KMR G D +Y+++++
Sbjct: 185 EAFLLSQKQTLTPLT--YNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSL 242
Query: 236 SQQQNL--LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
++ + + + + +E++ + E DV +I + K+ +A+ Q +
Sbjct: 243 TRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSA 302
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
++I+ L R EA +E+ + +G P T YNA++ Y + + DA +V
Sbjct: 303 KTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMV 362
Query: 354 DEMKQCGVGPNSRTYDIIL 372
EM++ GV P+ TY +++
Sbjct: 363 SEMEKRGVSPDEHTYSLLI 381
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 1/196 (0%)
Query: 111 AEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXX 169
A +++G +++ +I + G ++ + L+ MK + +L T
Sbjct: 504 AMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSG 563
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ +A+E E+M+ GLKP + +N L++ + E+A F M GL P L +
Sbjct: 564 RFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALN 623
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ + + + V + MK +PDVVTY L+ A + K+ + Y EM
Sbjct: 624 SLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMS 683
Query: 290 NMMPSPHIFSTLINGL 305
P S L + L
Sbjct: 684 GCKPDRKARSMLRSAL 699
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 156/361 (43%), Gaps = 43/361 (11%)
Query: 53 IPHTPHADKICKILS-----KSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSF 107
+ H P A + KI+S + P+S D LS ++P + EV+ KL N + F
Sbjct: 33 VIHCPEA-WLVKIVSTLFVYRVPDS--DLCFCYLSKNLNPFISFEVVKKLDNNPHIGFRF 89
Query: 108 FHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQ------------------ 149
+ ++ + +HS +++ L +L K + + E MK
Sbjct: 90 WEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFA 149
Query: 150 --------RKLLTRD--------TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDF 193
LL + +V++A++ F++ ++ + F
Sbjct: 150 EKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTF 209
Query: 194 NKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKC 253
N L+ LC EKA EL M G PD+ +Y L++G+ + L + +E+ +++K
Sbjct: 210 NILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS 269
Query: 254 -ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD 312
PDVVTY +I+ YCKA K EA +M + P+ F+ L++G +
Sbjct: 270 GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329
Query: 313 EALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
A E K + G P+ T+ +++ YC ++ +R+ +EM G+ PN+ TY I++
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 373 Q 373
Sbjct: 390 N 390
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 113/240 (47%), Gaps = 38/240 (15%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELF---------------- 213
K ++A+E M +G +P++ +N L+ CKS + KA E+F
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 214 --------------------DKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREM-K 252
D M G+ P ++ +L++G+++ +L E+ +M
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS 340
Query: 253 CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD 312
CF PDVVT+ LI+ YC+ + + + EM + M P+ +S LIN L ++ RL
Sbjct: 341 FGCF-PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLL 399
Query: 313 EALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+A E + + P+ YN V+ +C + ++++A +V+EM++ P+ T+ I++
Sbjct: 400 KARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 117/252 (46%), Gaps = 2/252 (0%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXKVKEAVETFEK 180
+++ LI+ K + + +D+K + + D T K++EA +
Sbjct: 243 TYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDD 302
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
M + G+ P FN LVD K+ + A+E+ KM G PD+ ++T L++G+ +
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
+ + + EM P+ TY ILINA C + +A ++ K+++P P +++
Sbjct: 363 VSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNP 422
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
+I+G +++EA E+ + P+ T+ ++ +C RM +A + +M G
Sbjct: 423 VIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Query: 361 VGPNSRTYDIIL 372
P+ T +L
Sbjct: 483 CSPDKITVSSLL 494
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 108/231 (46%), Gaps = 1/231 (0%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKM 181
++ ++I K + + +L++DM + + T T ++ A E KM
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKM 338
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
+G P+V F L+D C+ V + L+++M RG+ P+ +Y+IL+ + L
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL 398
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
L+ E+ ++ + P Y +I+ +CKA K +EA EM++K P F+ L
Sbjct: 399 LKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTIL 458
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
I G R+ EA+ + K A G +P+ T ++++ + +AY +
Sbjct: 459 IIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 156/361 (43%), Gaps = 43/361 (11%)
Query: 53 IPHTPHADKICKILS-----KSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSF 107
+ H P A + KI+S + P+S D LS ++P + EV+ KL N + F
Sbjct: 33 VIHCPEA-WLVKIVSTLFVYRVPDS--DLCFCYLSKNLNPFISFEVVKKLDNNPHIGFRF 89
Query: 108 FHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQ------------------ 149
+ ++ + +HS +++ L +L K + + E MK
Sbjct: 90 WEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFA 149
Query: 150 --------RKLLTRD--------TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDF 193
LL + +V++A++ F++ ++ + F
Sbjct: 150 EKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTF 209
Query: 194 NKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKC 253
N L+ LC EKA EL M G PD+ +Y L++G+ + L + +E+ +++K
Sbjct: 210 NILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS 269
Query: 254 -ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD 312
PDVVTY +I+ YCKA K EA +M + P+ F+ L++G +
Sbjct: 270 GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329
Query: 313 EALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
A E K + G P+ T+ +++ YC ++ +R+ +EM G+ PN+ TY I++
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 373 Q 373
Sbjct: 390 N 390
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 113/240 (47%), Gaps = 38/240 (15%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELF---------------- 213
K ++A+E M +G +P++ +N L+ CKS + KA E+F
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 214 --------------------DKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREM-K 252
D M G+ P ++ +L++G+++ +L E+ +M
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS 340
Query: 253 CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD 312
CF PDVVT+ LI+ YC+ + + + EM + M P+ +S LIN L ++ RL
Sbjct: 341 FGCF-PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLL 399
Query: 313 EALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+A E + + P+ YN V+ +C + ++++A +V+EM++ P+ T+ I++
Sbjct: 400 KARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 117/252 (46%), Gaps = 2/252 (0%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXKVKEAVETFEK 180
+++ LI+ K + + +D+K + + D T K++EA +
Sbjct: 243 TYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDD 302
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
M + G+ P FN LVD K+ + A+E+ KM G PD+ ++T L++G+ +
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
+ + + EM P+ TY ILINA C + +A ++ K+++P P +++
Sbjct: 363 VSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNP 422
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
+I+G +++EA E+ + P+ T+ ++ +C RM +A + +M G
Sbjct: 423 VIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Query: 361 VGPNSRTYDIIL 372
P+ T +L
Sbjct: 483 CSPDKITVSSLL 494
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 108/231 (46%), Gaps = 1/231 (0%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKM 181
++ ++I K + + +L++DM + + T T ++ A E KM
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKM 338
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
+G P+V F L+D C+ V + L+++M RG+ P+ +Y+IL+ + L
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL 398
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
L+ E+ ++ + P Y +I+ +CKA K +EA EM++K P F+ L
Sbjct: 399 LKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTIL 458
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
I G R+ EA+ + K A G +P+ T ++++ + +AY +
Sbjct: 459 IIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 169/385 (43%), Gaps = 33/385 (8%)
Query: 16 SNLPLSKPYPASLTPLSTSPTIKLPQNLSGSLRIHTLIPHTPH----ADKICKILSKSPN 71
SNL Y +S+ P ++ +P+ + L + L+P + + D IC L+ S
Sbjct: 6 SNLRFFSSYSSSIVPRCSN----IPKPILNPL--YNLLPQSQNPSKIVDVICSTLNHSDY 59
Query: 72 STIDAALADLSVEVSPEL----VAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHAL 127
S + L D + P L ++ VL + + A++FF W + G + + ++ L
Sbjct: 60 SVLLPNLRDEVKSLIPHLGYPEISRVLLRFQSDASRAITFFKWVKFDLGKRPNVGNYCLL 119
Query: 128 IEALGKIRQFKVIWNLV----------EDMKQRKLLTRDTXXXXXXXXXXXXKVK----- 172
+ L ++F + + E++ ++L T VK
Sbjct: 120 LHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKL 179
Query: 173 ----EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
E F ++ G V N L++ L K +E +++ M G+ P+ ++
Sbjct: 180 GLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTF 239
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
IL + N V++ +M+ E FEPD+VTY L+++YC+ + EA Y M
Sbjct: 240 NILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYR 299
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
+ ++P +++LI GL D R+ EA + + + G P+ +YN ++ AYC M
Sbjct: 300 RRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQ 359
Query: 349 AYRVVDEMKQCGVGPNSRTYDIILQ 373
+ +++ EM V P+ T +I++
Sbjct: 360 SKKLLHEMLGNSVVPDRFTCKVIVE 384
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 74/146 (50%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+E + EKME+ G +P++ +N LV C+ +++A L+ M R +VPDL +YT L
Sbjct: 253 REVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSL 312
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++G + + ++ M +PD ++Y LI AYCK ++ HEM ++
Sbjct: 313 IKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSV 372
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEF 317
+P ++ G + RL A+ F
Sbjct: 373 VPDRFTCKVIVEGFVREGRLLSAVNF 398
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 114/290 (39%), Gaps = 43/290 (14%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR----KLLTRDTXXXXXXXXXXXXKV 171
G +T +F+ L F+ + + +E M++ L+T +T ++
Sbjct: 231 GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRG---RL 287
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
KEA ++ M + + P++ + L+ LCK V +A + F +M RG+ PD SY L
Sbjct: 288 KEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTL 347
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM----- 286
+ + ++ + + ++ EM PD T +++ + + + AV F E+
Sbjct: 348 IYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKV 407
Query: 287 -------------------------------QEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
+E+ P ++ LI L ++EAL
Sbjct: 408 DIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEAL 467
Query: 316 EFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNS 365
K K + TY A++G C R +A ++ EM V P+S
Sbjct: 468 VLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDS 517
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 1/205 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV-PDLKSY 228
+V EA + +++ + P+ +N L+ LCK K + E D+MR V PDL S+
Sbjct: 174 RVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSF 233
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
TIL++ +NL + ++ F+PD Y ++ +C K EAVG Y +M+E
Sbjct: 234 TILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKE 293
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
+ + P ++TLI GL R++EA + + G+ P+T TY +++ C
Sbjct: 294 EGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLG 353
Query: 349 AYRVVDEMKQCGVGPNSRTYDIILQ 373
A +++EM+ G PN TY+ +L
Sbjct: 354 ALSLLEEMEARGCAPNDCTYNTLLH 378
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 114/259 (44%), Gaps = 36/259 (13%)
Query: 118 KHS---TESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEA 174
KHS T +++ L++ L K + V++ V++M+
Sbjct: 188 KHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMR-------------------------- 221
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
+ + +KP++ F L+D +C SK++ +A L K+ + G PD Y +++G
Sbjct: 222 -------DDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKG 274
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
+ V ++MK E EPD +TY LI KA + +EA + M + P
Sbjct: 275 FCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPD 334
Query: 295 PHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD 354
+++L+NG+ AL E+ +A G AP TYN ++ C + MD + +
Sbjct: 335 TATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYE 394
Query: 355 EMKQCGVGPNSRTYDIILQ 373
MK GV S Y +++
Sbjct: 395 MMKSSGVKLESNGYATLVR 413
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 74/188 (39%), Gaps = 38/188 (20%)
Query: 223 PDLKSYTILLEGWSQ--QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAV 280
P ++ ILL + ++ V+ V M EPD VT I + + C+ + DEA
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 281 GFYHEMQEKNMMPSPHI------------------------------------FSTLING 304
E+ EK+ P + F+ LI+
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDN 239
Query: 305 LGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPN 364
+ + K L EA+ K GF P+ YN ++ +C + +A V +MK+ GV P+
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD 299
Query: 365 SRTYDIIL 372
TY+ ++
Sbjct: 300 QITYNTLI 307
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 140/314 (44%), Gaps = 10/314 (3%)
Query: 70 PNSTIDAALADLSVEVSPELVAEVLNKL---------SNAGVLALSFFHWAEKQKGFKHS 120
P +AL +L+V +S LV EVL + + LA FF W Q+ F+H+
Sbjct: 92 PGFNTKSALDELNVSISGLLVREVLVGILRTLSFDNKTRCAKLAYKFFVWCGGQENFRHT 151
Query: 121 TESFHALIEALGKIRQFKVIWNLVEDM-KQRKLLTRDTXXXXXXXXXXXXKVKEAVETFE 179
+H L++ + ++K + L+++M K T T ++ VE F
Sbjct: 152 ANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFI 211
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
K + + +P +N ++ L K + ++++M G PD+ +Y I++ +
Sbjct: 212 KSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLG 271
Query: 240 NLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
R+ + EM + F PD+ TY IL++ K A+ + M+E + P F+
Sbjct: 272 KTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFT 331
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQC 359
TLI+GL +L+ F ++ G P+ Y ++ Y ++ A + EM +
Sbjct: 332 TLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEK 391
Query: 360 GVGPNSRTYDIILQ 373
G PN TY+ +++
Sbjct: 392 GQLPNVFTYNSMIR 405
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 74/143 (51%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+ M + G++P V F L+D L ++ +E + D+ G PD+ YT+++
Sbjct: 311 ALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMIT 370
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+ L + E+ +EM + P+V TY +I +C A K+ EA EM+ + P
Sbjct: 371 GYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNP 430
Query: 294 SPHIFSTLINGLGSDKRLDEALE 316
+ ++STL+N L + ++ EA E
Sbjct: 431 NFVVYSTLVNNLKNAGKVLEAHE 453
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Query: 173 EAVETF-EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
EA + F ++ K G P+V + ++ +EKA+E+F +M +G +P++ +Y +
Sbjct: 344 EACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSM 403
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+ G+ + +EM+ P+ V Y L+N A K EA +M EK
Sbjct: 404 IRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 122/237 (51%), Gaps = 7/237 (2%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVK 172
QKG K +T + + +++AL K R+ NL+ +R + + T KV+
Sbjct: 444 QKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVE 503
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+A+E +++M+K + P VS FN L+ LC E A E FD++ GL+PD ++ ++
Sbjct: 504 KALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSII 563
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G+ ++ + + E E F+PD T IL+N CK ++A+ F++ + E+ +
Sbjct: 564 LGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV 623
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ ++T+I+ DK+L EA + + + G P+ TYN+ + S+ M+D
Sbjct: 624 DTV-TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFI-----SLLMEDG 674
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 108/230 (46%), Gaps = 34/230 (14%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+E +M + G+K N ++D LCK + +++A L + RG + D +Y L+
Sbjct: 435 ALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIM 494
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+ +++ + + E+ EMK P V T+ LI C K + A+ + E+ E ++P
Sbjct: 495 GFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLP 554
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAP------------------------- 328
F+++I G + R+++A EFY + + F P
Sbjct: 555 DDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFF 614
Query: 329 ---------ETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYD 369
+T TYN ++ A+C ++ +AY ++ EM++ G+ P+ TY+
Sbjct: 615 NTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYN 664
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 130/287 (45%), Gaps = 37/287 (12%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKM 181
+++ +++A+ K + + L+ DMK+ L+ R T +KEA + E M
Sbjct: 242 TYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW------ 235
++ + P++ +N L++ LC + S+ + EL D M+ L PD+ +Y L++G
Sbjct: 302 KQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLS 361
Query: 236 --------SQQQNLLRVNEV---------CREMKCEC-------------FEPDVVTYGI 265
+ + ++ N+V C+E K E F PD+VTY
Sbjct: 362 LEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHT 421
Query: 266 LINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANG 325
LI AY K A+ EM +K + + +T+++ L +++LDEA G
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG 481
Query: 326 FAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
F + TY ++ + +++ A + DEMK+ + P T++ ++
Sbjct: 482 FIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLI 528
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 3/224 (1%)
Query: 152 LLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQE 211
LLT +T + A E F+ M K G+ V FN LV+ C +E A
Sbjct: 166 LLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALG 225
Query: 212 LFDKMRHRGLV-PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAY 270
+ ++M V PD +Y +L+ S++ L + E+ +MK P+ VTY L+ Y
Sbjct: 226 MLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGY 285
Query: 271 CKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPET 330
CK EA M++ N++P ++ LINGL + + E LE + K+ P+
Sbjct: 286 CKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDV 345
Query: 331 PTYNAVVGAYCWSMRMD-DAYRVVDEMKQCGVGPNSRTYDIILQ 373
TYN ++ C+ + + +A +++++M+ GV N T++I L+
Sbjct: 346 VTYNTLIDG-CFELGLSLEARKLMEQMENDGVKANQVTHNISLK 388
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 103/204 (50%), Gaps = 6/204 (2%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KVKE V+ +G P++ ++ L+ K + A E+ +M +G+ + +
Sbjct: 402 KVKELVDM------HGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLN 455
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L+ +++ L + + F D VTYG LI + + +K ++A+ + EM++
Sbjct: 456 TILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKV 515
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ F++LI GL + + A+E +++ +G P+ T+N+++ YC R++ A
Sbjct: 516 KITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKA 575
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
+ +E + P++ T +I+L
Sbjct: 576 FEFYNESIKHSFKPDNYTCNILLN 599
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 109/203 (53%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
++ ++E F+ M + G P V FN L++ L + + +EKA E+ D+M G+ + +YT
Sbjct: 605 MRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTK 664
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+++G++ + + E ++ E + D+ TY L+ A CK+ + A+ EM +N
Sbjct: 665 IMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARN 724
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ + +++ LI+G + EA + ++ K G P+ TY + + A + M+ A
Sbjct: 725 IPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRAT 784
Query: 351 RVVDEMKQCGVGPNSRTYDIILQ 373
+ ++EM+ GV PN +TY +++
Sbjct: 785 QTIEEMEALGVKPNIKTYTTLIK 807
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 102/202 (50%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
K+ + F+++++ G P V + L+++ K + KA E+ M+ G+ +LK+Y+++
Sbjct: 466 KKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMM 525
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+ G+ + ++ V +M E +PDV+ Y +I+A+C D A+ EMQ+
Sbjct: 526 INGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRH 585
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P+ F +I+G + +LE ++ + G P T+N ++ +M+ A
Sbjct: 586 RPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVE 645
Query: 352 VVDEMKQCGVGPNSRTYDIILQ 373
++DEM GV N TY I+Q
Sbjct: 646 ILDEMTLAGVSANEHTYTKIMQ 667
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 8/203 (3%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQEL---FDKMRHRGLVPDLKSYTI 230
A FE M K G+KP+V +N ++ C ++++A + K+RHR P +++
Sbjct: 538 AFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHR---PTTRTFMP 594
Query: 231 LLEGWSQQQNLLRVNEVCREM-KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ G+++ ++ R EV M +C C P V T+ LIN + ++ ++AV EM
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCV-PTVHTFNGLINGLVEKRQMEKAVEILDEMTLA 653
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ + H ++ ++ G S +A E++ + + G + TY A++ A C S RM A
Sbjct: 654 GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSA 713
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
V EM + NS Y+I++
Sbjct: 714 LAVTKEMSARNIPRNSFVYNILI 736
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 122/274 (44%), Gaps = 1/274 (0%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKV 171
+ +G ++ + +LI A R + V MK+ + ++ T
Sbjct: 336 RARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHA 395
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+ A F++ ++ S + K++ C++ ++E+A+ L +M G+ + Y +
Sbjct: 396 EAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTM 455
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++G++ + + V + +K F P VVTYG LIN Y K K +A+ M+E+ +
Sbjct: 456 MDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGV 515
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
+ +S +ING K A +E G P+ YN ++ A+C MD A +
Sbjct: 516 KHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQ 575
Query: 352 VVDEMKQCGVGPNSRTYDIILQPDKGSKNPRSLL 385
V EM++ P +RT+ I+ S + R L
Sbjct: 576 TVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 609
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 112/241 (46%), Gaps = 1/241 (0%)
Query: 120 STESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETF 178
+ +F+ LI L + RQ + ++++M + + T +A E F
Sbjct: 623 TVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYF 682
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
+++ GL ++ + L+ CKS ++ A + +M R + + Y IL++GW+++
Sbjct: 683 TRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARR 742
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
++ ++ ++MK E +PD+ TY I+A KA + A EM+ + P+ +
Sbjct: 743 GDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTY 802
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
+TLI G ++AL YE+ KA G P+ Y+ ++ + + +AY M
Sbjct: 803 TTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTI 862
Query: 359 C 359
C
Sbjct: 863 C 863
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 96/193 (49%)
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
+ME+ G+ ++ ++ ++D +K +F +++ G P + +Y L+ +++
Sbjct: 439 EMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVG 498
Query: 240 NLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
+ + EV R MK E + ++ TY ++IN + K K + A + +M ++ M P +++
Sbjct: 499 KISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYN 558
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQC 359
+I+ +D A++ ++ + P T T+ ++ Y S M + V D M++C
Sbjct: 559 NIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRC 618
Query: 360 GVGPNSRTYDIIL 372
G P T++ ++
Sbjct: 619 GCVPTVHTFNGLI 631
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 103/233 (44%), Gaps = 39/233 (16%)
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
+ FEK+ K P ++F +V + + +A+E F++MR RG+ P + YT L+
Sbjct: 298 ISAFEKISK----PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHA 353
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKK-------YDEA-------- 279
++ +++ R+MK E E +VTY +++ + KA +DEA
Sbjct: 354 YAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLN 413
Query: 280 ------VGFYH--------------EMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYE 319
+ + H EM+E+ + I+ T+++G + L ++
Sbjct: 414 ASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFK 473
Query: 320 KFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+ K GF P TY ++ Y ++ A V MK+ GV N +TY +++
Sbjct: 474 RLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMI 526
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 5/254 (1%)
Query: 123 SFHALIEAL---GKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFE 179
S++ LI+ L GKI + +IW L+ + + T V +A+ +
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMP--AKGYAADKTTYGIFIHGLCVNGYVNKALGVMQ 418
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
++E G +V + ++D LCK K +E+A L +M G+ + L+ G +
Sbjct: 419 EVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDS 478
Query: 240 NLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
L + REM P VV+Y ILI CKA K+ EA F EM E P +S
Sbjct: 479 RLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYS 538
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQC 359
L+ GL D+++D ALE + +F +G + +N ++ C ++DDA V+ M+
Sbjct: 539 ILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHR 598
Query: 360 GVGPNSRTYDIILQ 373
N TY+ +++
Sbjct: 599 NCTANLVTYNTLME 612
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 134/277 (48%), Gaps = 4/277 (1%)
Query: 85 VSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLV 144
+SP+ V ++L N A + F A + G+ HS +H ++ L + R + +V
Sbjct: 8 LSPKHVLKLLKSEKNPRA-AFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIV 66
Query: 145 EDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFEKM-EKYGLKPEVSDFNKLVDVLCK 202
E ++ ++ D +A++ F++M E +G +P + +N L++ +
Sbjct: 67 ELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVE 126
Query: 203 SKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVT 262
+K K + LF G+ P+L++Y +L++ +++ + M E F+PDV +
Sbjct: 127 AKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFS 186
Query: 263 YGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEK-F 321
Y +IN KA K D+A+ + EM E+ + P ++ LI+G +K A+E +++
Sbjct: 187 YSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLL 246
Query: 322 KANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
+ + P T+N ++ R+DD ++ + MKQ
Sbjct: 247 EDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQ 283
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 123/262 (46%), Gaps = 6/262 (2%)
Query: 112 EKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR-KLLTRDTXXXXXXXXXXXXK 170
E++K + H L +A G + + + ++N +++ K ++T +T K
Sbjct: 285 EREKDLYTYSSLIHGLCDA-GNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCG---K 340
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+KE++E + ME + +N L+ L ++ +++A ++ M +G D +Y I
Sbjct: 341 IKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGI 399
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+ G + + V +E++ DV Y +I+ CK K+ +EA EM +
Sbjct: 400 FIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHG 459
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ + H+ + LI GL D RL EA F + NG P +YN ++ C + + +A
Sbjct: 460 VELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEAS 519
Query: 351 RVVDEMKQCGVGPNSRTYDIIL 372
V EM + G P+ +TY I+L
Sbjct: 520 AFVKEMLENGWKPDLKTYSILL 541
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 95/204 (46%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+++EA ++M K+G++ N L+ L + + +A +M G P + SY
Sbjct: 444 RLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYN 503
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL+ G + + +EM ++PD+ TY IL+ C+ +K D A+ +H+ +
Sbjct: 504 ILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQS 563
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ + + LI+GL S +LD+A+ + TYN ++ + + A
Sbjct: 564 GLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRA 623
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
+ M + G+ P+ +Y+ I++
Sbjct: 624 TVIWGYMYKMGLQPDIISYNTIMK 647
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 107/254 (42%), Gaps = 38/254 (14%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFEKM 181
++ ++I+ L K ++ + NLV++M + + L ++ EA +M
Sbjct: 431 AYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREM 490
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG------- 234
K G +P V +N L+ LCK+ +A +M G PDLK+Y+ILL G
Sbjct: 491 GKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKI 550
Query: 235 ------WSQ-----------QQNLLRVNEVCR------------EMKCECFEPDVVTYGI 265
W Q N+L ++ +C M+ ++VTY
Sbjct: 551 DLALELWHQFLQSGLETDVMMHNIL-IHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNT 609
Query: 266 LINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANG 325
L+ + K + A + M + + P ++T++ GL + + A+EF++ + +G
Sbjct: 610 LMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHG 669
Query: 326 FAPETPTYNAVVGA 339
P T+N +V A
Sbjct: 670 IFPTVYTWNILVRA 683
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 104/248 (41%), Gaps = 2/248 (0%)
Query: 60 DKICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLA-LSFFHWAEKQKGFK 118
D +CK S + ++ VE++ + ++ L L SFF + G +
Sbjct: 437 DCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCR 496
Query: 119 HSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVET 177
+ S++ LI L K +F V++M + T K+ A+E
Sbjct: 497 PTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALEL 556
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
+ + + GL+ +V N L+ LC ++ A + M HR +L +Y L+EG+ +
Sbjct: 557 WHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFK 616
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ R + M +PD+++Y ++ C + A+ F+ + + + P+ +
Sbjct: 617 VGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYT 676
Query: 298 FSTLINGL 305
++ L+ +
Sbjct: 677 WNILVRAV 684
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 145/319 (45%), Gaps = 12/319 (3%)
Query: 61 KICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHS 120
+I KI P++ + AL L ++V LV +L V + FF WA K++ F+H
Sbjct: 69 RIVKIFKWGPDA--EKALEVLKLKVDHRLVRSILEIDVEINV-KIQFFKWAGKRRNFQHD 125
Query: 121 TESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXKVKEAVETF 178
++ LI L + R + ++ ++++ + ++ V +A+ F
Sbjct: 126 CSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVF 185
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRG-LVPDLKSYTILLEGWSQ 237
+ + KP S +N ++ +L + EK E++ +M + G PD +Y+ L+ S
Sbjct: 186 YQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALI---SS 242
Query: 238 QQNLLRVNEVCR---EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
+ L R + R EMK C +P Y L+ Y K K ++A+ + EM+ P+
Sbjct: 243 YEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPT 302
Query: 295 PHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD 354
+ ++ LI GLG R+DEA FY+ +G P+ N ++ R+++ V
Sbjct: 303 VYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFS 362
Query: 355 EMKQCGVGPNSRTYDIILQ 373
EM P +Y+ +++
Sbjct: 363 EMGMWRCTPTVVSYNTVIK 381
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 130/273 (47%), Gaps = 4/273 (1%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTX--XXXXXXXXXXXK 170
K+ G + ++ LI+ LGK + + +DM R LT D +
Sbjct: 295 KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDM-LRDGLTPDVVFLNNLMNILGKVGR 353
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKS-VEKAQELFDKMRHRGLVPDLKSYT 229
V+E F +M + P V +N ++ L +SK+ V + FDKM+ + P +Y+
Sbjct: 354 VEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYS 413
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL++G+ + + + + EM + F P Y LINA KAK+Y+ A + E++E
Sbjct: 414 ILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKEN 473
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
S +++ +I G +L EA++ + + K G P+ YNA++ + +++A
Sbjct: 474 FGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEA 533
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQPDKGSKNPR 382
++ +M++ G + +++IIL + PR
Sbjct: 534 NSLLRKMEENGCRADINSHNIILNGFARTGVPR 566
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 101/203 (49%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V++A+ E+M++ G P + + L++ L K+K E A ELF +++ + Y
Sbjct: 424 RVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYA 483
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++++ + + L ++ EMK + PDV Y L++ KA +EA +M+E
Sbjct: 484 VMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEEN 543
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ + ++NG A+E +E K +G P+ TYN ++G + + ++A
Sbjct: 544 GCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEA 603
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
R++ EMK G ++ TY IL
Sbjct: 604 ARMMREMKDKGFEYDAITYSSIL 626
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 148/340 (43%), Gaps = 39/340 (11%)
Query: 73 TIDAALADLSVEVSPELVAEVLNKLSNAGVL--ALSFFHWAEKQKGFKHS---------- 120
TI + + V VSP +++E++ L A ++ ALS F+ A+ +K S
Sbjct: 148 TIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILML 207
Query: 121 -------------------------TESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-T 154
T ++ ALI + K+ + L ++MK + T
Sbjct: 208 MQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPT 267
Query: 155 RDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFD 214
KV++A++ FE+M++ G P V + +L+ L K+ V++A +
Sbjct: 268 EKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYK 327
Query: 215 KMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAK 274
M GL PD+ L+ + + + V EM P VV+Y +I A ++K
Sbjct: 328 DMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESK 387
Query: 275 KY-DEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTY 333
+ E ++ +M+ ++ PS +S LI+G R+++AL E+ GF P Y
Sbjct: 388 AHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAY 447
Query: 334 NAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+++ A + R + A + E+K+ +SR Y ++++
Sbjct: 448 CSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIK 487
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 101/206 (49%), Gaps = 2/206 (0%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR-KLLTRDTXXXXXXXXXXXXKVK 172
+KGF ++ +LI ALGK ++++ L +++K+ ++ K+
Sbjct: 437 EKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLS 496
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EAV+ F +M+ G P+V +N L+ + K+ + +A L KM G D+ S+ I+L
Sbjct: 497 EAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIIL 556
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G+++ R E+ +K +PD VTY L+ + A ++EA EM++K
Sbjct: 557 NGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFE 616
Query: 293 PSPHIFSTLINGLGS-DKRLDEALEF 317
+S++++ +G+ D D+ F
Sbjct: 617 YDAITYSSILDAVGNVDHEKDDVSSF 642
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 130/279 (46%), Gaps = 4/279 (1%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL----LTRDTXX 159
ALS F WA+KQ + S E + L + L + R F I +L E+M Q L+ +
Sbjct: 188 ALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYN 247
Query: 160 XXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHR 219
K++ A F+K ++ G K + +N L+ + KA E+++ M
Sbjct: 248 QVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKT 307
Query: 220 GLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEA 279
+ D +Y +++ ++ L ++ ++MK P + L+++ KA + D +
Sbjct: 308 DSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTS 367
Query: 280 VGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
+ Y EMQ PS +F +LI+ +LD AL +++ K +GF P Y ++ +
Sbjct: 368 MKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIES 427
Query: 340 YCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQPDKGS 378
+ S +++ A V +M++ G P TY +L+ GS
Sbjct: 428 HAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGS 466
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 137/284 (48%), Gaps = 4/284 (1%)
Query: 92 EVLNKLSNAGVLALSFFHWAEKQK-GFKHSTESFHALIEA-LGKIRQFKVIWNLVEDM-K 148
+V+ L+ A L ++F + + Q+ G K T++++ L+ L K +K + + E M K
Sbjct: 248 QVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKA-FEIYESMEK 306
Query: 149 QRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEK 208
LL T ++ A + F++M++ L+P S F+ LVD + K+ ++
Sbjct: 307 TDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDT 366
Query: 209 AQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILIN 268
+ +++ +M+ G P + L++ +++ L + EMK F P+ Y ++I
Sbjct: 367 SMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIE 426
Query: 269 AYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAP 328
++ K+ K + A+ + +M++ +P+P +S L+ ++D A++ Y G P
Sbjct: 427 SHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRP 486
Query: 329 ETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+Y +++ +D A +++ EMK G + D+++
Sbjct: 487 GLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLM 530
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 110/239 (46%), Gaps = 36/239 (15%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV A + ME+ G++P V +N ++ C+ K+++ A+ +F +M +GL P+ +Y+
Sbjct: 464 KVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYS 523
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKA---------------- 273
IL++G+ + ++ +V +M FE + V Y +IN CK
Sbjct: 524 ILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKE 583
Query: 274 KKY--------------------DEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDE 313
K+Y D AV Y EM E P+ F++LING R+D
Sbjct: 584 KRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDL 643
Query: 314 ALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
ALE + K+ + P Y A++ +C M AY + E+ + G+ PN Y+ ++
Sbjct: 644 ALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLI 702
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 122/264 (46%), Gaps = 6/264 (2%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL----LTRDTXXXXXXXXXXXX 169
+KG + + ++ LI+ K + + W+++ M + +T
Sbjct: 512 EKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTS 571
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K KE ++ K ++Y + + +N ++D K + A E + +M G P++ ++T
Sbjct: 572 KAKEMLQNLIKEKRYSMS--CTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFT 629
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G+ + + E+ EMK + D+ YG LI+ +CK A + E+ E
Sbjct: 630 SLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPEL 689
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+MP+ ++++LI+G + ++D A++ Y+K +G + + TY ++ ++ A
Sbjct: 690 GLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLA 749
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
+ E+ G+ P+ + +++
Sbjct: 750 SDLYSELLDLGIVPDEILHMVLVN 773
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 96/199 (48%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
AVET+ +M + G P V F L++ CKS ++ A E+ +M+ L DL +Y L++
Sbjct: 609 AVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALID 668
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+ ++ ++ + E+ P+V Y LI+ + K D A+ Y +M +
Sbjct: 669 GFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISC 728
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
++T+I+GL D ++ A + Y + G P+ + +V + A +++
Sbjct: 729 DLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKML 788
Query: 354 DEMKQCGVGPNSRTYDIIL 372
+EMK+ V PN Y ++
Sbjct: 789 EEMKKKDVTPNVLLYSTVI 807
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 96/199 (48%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+E +M+ LK ++ + L+D CK ++ A LF ++ GL+P++ Y L+
Sbjct: 644 ALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLIS 703
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+ + ++ ++M + D+ TY +I+ K + A Y E+ + ++P
Sbjct: 704 GFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVP 763
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ L+NGL + +A + E+ K P Y+ V+ + +++A+R+
Sbjct: 764 DEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLH 823
Query: 354 DEMKQCGVGPNSRTYDIIL 372
DEM + G+ + +++++
Sbjct: 824 DEMLEKGIVHDDTVFNLLV 842
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 113/251 (45%), Gaps = 3/251 (1%)
Query: 124 FHALIEALGKIRQFKVIWNLVEDMKQRKLL--TRDTXXXXXXXXXXXXKVKEAVETFEKM 181
F ++A K + +L+ +M+ + + +++T ++EAV ++M
Sbjct: 277 FSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEM 336
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
+G+ V LV+ CK + KA +LF++M GL PD +++++E + + +
Sbjct: 337 VGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEM 396
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
+ E MK P V +I KA+ + A+ +++ E + + + + +
Sbjct: 397 EKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFE-SWIAHGFMCNKI 455
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
++D A F + + G P YN ++ A+C MD A + EM + G+
Sbjct: 456 FLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGL 515
Query: 362 GPNSRTYDIIL 372
PN+ TY I++
Sbjct: 516 EPNNFTYSILI 526
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 2/208 (0%)
Query: 98 SNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRD 156
SN LAL H K K ++ ALI+ K K + L ++ + L+
Sbjct: 638 SNRMDLALEMTHEM-KSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVS 696
Query: 157 TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM 216
K+ A++ ++KM G+ ++ + ++D L K ++ A +L+ ++
Sbjct: 697 VYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSEL 756
Query: 217 RHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKY 276
G+VPD + +L+ G S++ L+ +++ EMK + P+V+ Y +I + +
Sbjct: 757 LDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNL 816
Query: 277 DEAVGFYHEMQEKNMMPSPHIFSTLING 304
+EA + EM EK ++ +F+ L++G
Sbjct: 817 NEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 36/200 (18%)
Query: 194 NKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKC 253
NK+ + CK V+ A M +G+ P++ Y ++ + +N+ + EM
Sbjct: 453 NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE 512
Query: 254 ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLG------- 306
+ EP+ TY ILI+ + K K A ++M N + I++T+INGL
Sbjct: 513 KGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSK 572
Query: 307 ---------SDKRL--------------------DEALEFYEKFKANGFAPETPTYNAVV 337
+KR D A+E Y + NG +P T+ +++
Sbjct: 573 AKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLI 632
Query: 338 GAYCWSMRMDDAYRVVDEMK 357
+C S RMD A + EMK
Sbjct: 633 NGFCKSNRMDLALEMTHEMK 652
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 86/169 (50%), Gaps = 1/169 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVP-DLKSY 228
K +EAV+ F ++ G +P+ F+ V CK+ + A +L +MR + VP ++Y
Sbjct: 254 KPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETY 313
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
T ++ + ++ N+ V EM V+ L+N YCK + +A+ ++ M+E
Sbjct: 314 TSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEE 373
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVV 337
+ + P +FS ++ + +++A+EFY + K+ AP + + ++
Sbjct: 374 EGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMI 422
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 102/216 (47%), Gaps = 1/216 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ EA E + KM G+ + L+ + + E+A ++F ++ RG PD +++
Sbjct: 220 IDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSL 279
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEP-DVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ + +L+ ++ REM+ + P TY +I A+ K +EAV EM
Sbjct: 280 AVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGF 339
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ S ++L+NG L +AL+ + + + G AP+ ++ +V +C +M M+ A
Sbjct: 340 GIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKA 399
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQPDKGSKNPRSLL 385
MK + P+S ++Q +++P + L
Sbjct: 400 IEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAAL 435
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 79/172 (45%), Gaps = 1/172 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++++A+E + +M+ + P + ++ K++S E A E+F+ +
Sbjct: 395 EMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNK 454
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
I L + +Q + + M+ + EP+VV Y ++ A+C+ K D A + EM EK
Sbjct: 455 IFLL-FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEK 513
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
+ P+ +S LI+G +K A + + A+ F YN ++ C
Sbjct: 514 GLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLC 565
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 1/181 (0%)
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
+++G + FN L++ ++K ++ A + F M R +VP + +L + +
Sbjct: 161 KRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLI 220
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
E+ +M D VT +L+ A + +K +EAV + + + P +FS
Sbjct: 221 DEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLA 280
Query: 302 INGLGSDKRLDEALEFYEKFKAN-GFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
+ L AL+ + + G TY +V+ A+ M++A RV+DEM G
Sbjct: 281 VQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFG 340
Query: 361 V 361
+
Sbjct: 341 I 341
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 135/302 (44%), Gaps = 22/302 (7%)
Query: 91 AEVLNKLSNAGVLALSFFHWAE-KQKGFKHSTESFHALIEAL---GKIRQFKVIWNLVED 146
++VLN L NA + L+F + E K+ G ++ ++++ G I Q + +N + +
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 147 MKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSV 206
+ + T KV A E FE M G P + ++ L+D CK+ V
Sbjct: 547 VGCTPNVV--TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV 604
Query: 207 EKAQELFDKMRHRGLVPDLK----------------SYTILLEGWSQQQNLLRVNEVCRE 250
EKA ++F++M VPD+ +Y LL+G+ + + ++
Sbjct: 605 EKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDA 664
Query: 251 MKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKR 310
M E EP+ + Y LI+ CK K DEA EM E + + +S+LI+ KR
Sbjct: 665 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR 724
Query: 311 LDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDI 370
D A + K N AP Y ++ C + D+AY+++ M++ G PN TY
Sbjct: 725 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 784
Query: 371 IL 372
++
Sbjct: 785 MI 786
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 116/223 (52%), Gaps = 24/223 (10%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K ++A +M G P+ S ++K+++ LC + +E A LF++M+ GLV D+ +YT
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYT 522
Query: 230 ILLEGWSQ----QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHE 285
I+++ + + +Q NE+ RE+ C P+VVTY LI+AY KAKK A +
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEM-REVGCT---PNVVTYTALIHAYLKAKKVSYANELFET 578
Query: 286 MQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEK----------------FKANGFAPE 329
M + +P+ +S LI+G ++++A + +E+ + N P
Sbjct: 579 MLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPN 638
Query: 330 TPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
TY A++ +C S R+++A +++D M G PN YD ++
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 155/350 (44%), Gaps = 24/350 (6%)
Query: 45 GSLRIHTLIPHTPHADKICKILSKSPNSTIDAA-------LADLSVEVSPELVAEVLNKL 97
G++ +H ++P + + ++ + + D L ++S LV EVL +
Sbjct: 83 GNVNVHQVVPIITQSSIDARAIADAVSGVDDVFGRKSQKFLRQFREKLSESLVIEVLRLI 142
Query: 98 SNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR-KLLTRD 156
+ + +SFF WA +Q G+KH+ ++AL++ + + KV ++ ++ K + +
Sbjct: 143 ARPSAV-ISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGE 201
Query: 157 TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM 216
A+E +++ + +P S +N L+ K+ ++ A + +M
Sbjct: 202 FLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREM 261
Query: 217 -----RHRGLVPDLKSYTILLEG-WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAY 270
R G +Y++ G W + L+ E F PD V Y LI+
Sbjct: 262 SLANLRMDGFTLRCFAYSLCKVGKWREALTLVET---------ENFVPDTVFYTKLISGL 312
Query: 271 CKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPET 330
C+A ++EA+ F + M+ + +P+ +STL+ G + K+L G P
Sbjct: 313 CEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSP 372
Query: 331 PTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQPDKGSKN 380
+N++V AYC S AY+++ +M +CG P Y+I++ G K+
Sbjct: 373 KIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 422
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 99/189 (52%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V+EA + + M G +P ++ L+D LCK +++AQE+ +M G L +Y+
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L++ + + + ++V +M P+VV Y +I+ CK K DEA M+EK
Sbjct: 714 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 773
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P+ ++ +I+G G +++ LE E+ + G AP TY ++ C + +D A
Sbjct: 774 GCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVA 833
Query: 350 YRVVDEMKQ 358
+ +++EMKQ
Sbjct: 834 HNLLEEMKQ 842
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 2/203 (0%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
F++ + +P V + L+D CKS VE+A++L D M G P+ Y L++G +
Sbjct: 627 FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 686
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
L EV EM F + TY LI+ Y K K+ D A +M E + P+ I
Sbjct: 687 VGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVI 746
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
++ +I+GL + DEA + + + G P TY A++ + +++ +++ M
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806
Query: 358 QCGVGPNSRTYDIILQPDKGSKN 380
GV PN TY +++ D KN
Sbjct: 807 SKGVAPNYVTYRVLI--DHCCKN 827
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 88/174 (50%), Gaps = 5/174 (2%)
Query: 187 KPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNE 246
K VS F + LC + EKA + +M +G +PD +Y+ +L +
Sbjct: 448 KINVSSFTR---CLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFL 504
Query: 247 VCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLG 306
+ EMK DV TY I+++++CKA ++A +++EM+E P+ ++ LI+
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564
Query: 307 SDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
K++ A E +E + G P TY+A++ +C + +++ A ++ + M CG
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM--CG 616
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 88/195 (45%), Gaps = 6/195 (3%)
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
G P FN LV C S A +L KM G +P Y IL+ ++ L
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426
Query: 245 N--EVCREMKCECFEPDVVTYGILINAY----CKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
+ ++ + E VV I ++++ C A KY++A EM + +P +
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
S ++N L + +++ A +E+ K G + TY +V ++C + ++ A + +EM++
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 359 CGVGPNSRTYDIILQ 373
G PN TY ++
Sbjct: 547 VGCTPNVVTYTALIH 561
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 90/203 (44%), Gaps = 2/203 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ EA E +M ++G + ++ L+D K K + A ++ KM P++ YT
Sbjct: 689 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 748
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+++G + ++ + M+ + +P+VVTY +I+ + K + + M K
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ + LI+ + LD A E+ K + T Y V+ + + ++
Sbjct: 809 GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIES 866
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
++DE+ Q P Y +++
Sbjct: 867 LGLLDEIGQDDTAPFLSVYRLLI 889
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 39/183 (21%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHR---------- 219
K++ +E E+M G+ P + L+D CK+ +++ A L ++M+
Sbjct: 794 KIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYR 853
Query: 220 --------------GLV---------PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECF 256
GL+ P L Y +L++ + Q L + E+ F
Sbjct: 854 KVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT--F 911
Query: 257 EPDVV----TYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD 312
+V TY LI + C A K + A + EM +K ++P F +LI GL + ++
Sbjct: 912 SATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKIS 971
Query: 313 EAL 315
EAL
Sbjct: 972 EAL 974
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 142/299 (47%), Gaps = 8/299 (2%)
Query: 82 SVEVSPELV--AEVLNKLSNAGVL--ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQF 137
S +V P+LV + +++ + +G L AL +F+ + K+ G + LI+ +
Sbjct: 368 SRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN-SVKEAGLIPDNVIYTILIQGYCRKGMI 426
Query: 138 KVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKL 196
V NL +M Q+ + T + EA + F +M + L P+ L
Sbjct: 427 SVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTIL 486
Query: 197 VDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECF 256
+D CK +++ A ELF KM+ + + D+ +Y LL+G+ + ++ E+ +M +
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 546
Query: 257 EPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALE 316
P ++Y IL+NA C EA + EM KN+ P+ I +++I G +
Sbjct: 547 LPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGES 606
Query: 317 FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM--KQCGVGPNSRTYDIILQ 373
F EK + GF P+ +YN ++ + M A+ +V +M +Q G+ P+ TY+ IL
Sbjct: 607 FLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILH 665
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 118/262 (45%), Gaps = 1/262 (0%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVK 172
+ KGF S ++ +ALI +L +I ++ W + +++ + +
Sbjct: 192 RSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKM 251
Query: 173 EAVETF-EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
E V TF ++++ G+ P++ +N L+ +E+A EL + M +G P + +Y +
Sbjct: 252 EKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTV 311
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+ G + R EV EM PD TY L+ CK E + +M+ +++
Sbjct: 312 INGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDV 371
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
+P FS++++ LD+AL ++ K G P+ Y ++ YC + A
Sbjct: 372 VPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMN 431
Query: 352 VVDEMKQCGVGPNSRTYDIILQ 373
+ +EM Q G + TY+ IL
Sbjct: 432 LRNEMLQQGCAMDVVTYNTILH 453
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 104/202 (51%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
++EA E M G P V +N +++ LCK E+A+E+F +M GL PD +Y
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
LL ++ +++ +V +M+ PD+V + +++ + ++ D+A+ +++ ++E
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
++P I++ LI G + A+ + G A + TYN ++ C + +A
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 351 RVVDEMKQCGVGPNSRTYDIIL 372
++ +EM + + P+S T I++
Sbjct: 466 KLFNEMTERALFPDSYTLTILI 487
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 138/295 (46%), Gaps = 6/295 (2%)
Query: 85 VSPELVA--EVLNKLSNAGVLALSF-FHWAEKQKGFKHSTESFHALIEALGKIRQFKVIW 141
V P++V +++ S+ G++ +F A KGF +++ +I L K +++
Sbjct: 266 VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAK 325
Query: 142 NLVEDMKQRKLLTRDTXXXXXXXXXXXXK--VKEAVETFEKMEKYGLKPEVSDFNKLVDV 199
+ +M R L+ D+ K V E + F M + P++ F+ ++ +
Sbjct: 326 EVFAEM-LRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSL 384
Query: 200 LCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPD 259
+S +++KA F+ ++ GL+PD YTIL++G+ ++ + + EM + D
Sbjct: 385 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMD 444
Query: 260 VVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYE 319
VVTY +++ CK K EA ++EM E+ + P + + LI+G L A+E ++
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504
Query: 320 KFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQP 374
K K + TYN ++ + +D A + +M + P +Y I++
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNA 559
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 104/220 (47%), Gaps = 3/220 (1%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKV 171
K+K + +++ L++ GK+ + DM +++L T + +
Sbjct: 507 KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHL 566
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
EA +++M +KP V N ++ C+S + + +KM G VPD SY L
Sbjct: 567 AEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTL 626
Query: 232 LEGWSQQQNLLRVNEVCREMKCE--CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+ G+ +++N+ + + ++M+ E PDV TY +++ +C+ + EA +M E+
Sbjct: 627 IYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIER 686
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPE 329
+ P ++ +ING S L EA +++ GF+P+
Sbjct: 687 GVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/410 (19%), Positives = 166/410 (40%), Gaps = 48/410 (11%)
Query: 3 FSRSPKRFFNLFSSNL-PLSKPYPASLTPLSTSPTIKLPQNLSGSLRIHTLIPHTPHADK 61
+ R+ + F + S L P S Y + L + + + +R ++P
Sbjct: 321 YERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSS 380
Query: 62 ICKILSKSPNSTIDAALADLSVEVSPELVAE------VLNKLSNAGVLALSFFHWAEK-Q 114
+ + ++S N +D AL + L+ + ++ G+++++ E Q
Sbjct: 381 MMSLFTRSGN--LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQ 438
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKE 173
+G +++ ++ L K + L +M +R L T ++
Sbjct: 439 QGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQN 498
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+E F+KM++ ++ +V +N L+D K ++ A+E++ M + ++P SY+IL+
Sbjct: 499 AMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVN 558
Query: 234 GWSQQQNLLRVNEV-----------------------CR------------EMKCECFEP 258
+ +L V CR +M E F P
Sbjct: 559 ALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVP 618
Query: 259 DVVTYGILINAYCKAKKYDEAVGFYHEMQEK--NMMPSPHIFSTLINGLGSDKRLDEALE 316
D ++Y LI + + + +A G +M+E+ ++P ++++++G ++ EA
Sbjct: 619 DCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEV 678
Query: 317 FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSR 366
K G P+ TY ++ + + +A+R+ DEM Q G P+ +
Sbjct: 679 VLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDK 728
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 137/329 (41%), Gaps = 32/329 (9%)
Query: 59 ADKICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSF-----FHWAEK 113
+KIC L + N+ + + ++P V EVL + N L F FH+
Sbjct: 55 VEKICFSLKQGNNNVRNHL-----IRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPN- 108
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTR------------------ 155
FKH++ S A+I L + + + + M +R ++R
Sbjct: 109 ---FKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSND 165
Query: 156 DTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDK 215
K++EA E F + G + N L+ L + VE A ++ +
Sbjct: 166 SVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQE 225
Query: 216 MRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKK 275
+ G+ ++ + I++ + + +V +++ + PD+VTY LI+AY
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 276 YDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNA 335
+EA + M K P + ++T+INGL + + A E + + +G +P++ TY +
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 336 VVGAYCWSMRMDDAYRVVDEMKQCGVGPN 364
++ C + + +V +M+ V P+
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPD 374
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/198 (18%), Positives = 83/198 (41%), Gaps = 17/198 (8%)
Query: 193 FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLK-----------------SYTILLEGW 235
+ ++ +L +S + AQ +M R V L+ + +L+ +
Sbjct: 116 LSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTY 175
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSP 295
Q + L +E ++ + F + LI + + + A G Y E+ + +
Sbjct: 176 VQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINV 235
Query: 296 HIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDE 355
+ + ++N L D ++++ F + + G P+ TYN ++ AY M++A+ +++
Sbjct: 236 YTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNA 295
Query: 356 MKQCGVGPNSRTYDIILQ 373
M G P TY+ ++
Sbjct: 296 MPGKGFSPGVYTYNTVIN 313
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 127/260 (48%), Gaps = 1/260 (0%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRK-LLTRDTXXXXXXXXXXXXKVK 172
KGF T + +AL+ L + + + + +++ R ++ R + K+
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA ++M K GLKP+ ++ L+ L VE+A + +D + G++PD+ +Y++++
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+G + + E EM + +P+ V Y LI AYC++ + A+ +M+ K +
Sbjct: 618 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ +++LI G+ R++EA +E+ + G P Y A++ Y +M +
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 737
Query: 353 VDEMKQCGVGPNSRTYDIIL 372
+ EM V PN TY +++
Sbjct: 738 LREMHSKNVHPNKITYTVMI 757
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 139/300 (46%), Gaps = 6/300 (2%)
Query: 85 VSPE--LVAEVLNKLSNAGVL--ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVI 140
VSP+ L +N G + A+ F E + G + +F+ +I+ LG ++
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKME-EAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 141 WNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDV 199
+ E M +R + T T ++ +A ++M K G P V +N L+D
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 200 LCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPD 259
++ S+ KA E+ D M +GL +Y L++G+ + + +EM F +
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 260 VVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYE 319
++ +I C +D A+ F EM +NM P + +TLI+GL + +ALE +
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 494
Query: 320 KFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQPDKGSK 379
+F GF +T T NA++ C + ++D+A+R+ E+ G + +Y+ ++ G K
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 102/204 (50%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K +A+E + + G + N L+ LC++ +++A + ++ RG V D SY
Sbjct: 485 KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYN 544
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G ++ L EM +PD TY ILI K +EA+ F+ + +
Sbjct: 545 TLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN 604
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
M+P + +S +I+G +R +E EF+++ + P T YN ++ AYC S R+ A
Sbjct: 605 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA 664
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
+ ++MK G+ PNS TY +++
Sbjct: 665 LELREDMKHKGISPNSATYTSLIK 688
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 105/205 (51%), Gaps = 18/205 (8%)
Query: 186 LKPEVSDFNKLVDVLC---KSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLL 242
++ ++SD L++V C K A ++F + ++G+ P + ILL +L+
Sbjct: 186 IRRKMSDL--LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILL------TSLV 237
Query: 243 RVNEV--CRE---MKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
R NE C E + C+ PDV + INA+CK K +EAV + +M+E + P+
Sbjct: 238 RANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVT 297
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
F+T+I+GLG R DEA F EK G P TY+ +V + R+ DAY V+ EM
Sbjct: 298 FNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMT 357
Query: 358 QCGVGPNSRTYDIILQP--DKGSKN 380
+ G PN Y+ ++ + GS N
Sbjct: 358 KKGFPPNVIVYNNLIDSFIEAGSLN 382
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 94/189 (49%)
Query: 186 LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVN 245
+ P L+ LCK KA EL+ + ++G V D ++ LL G + L
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 246 EVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGL 305
+ +E+ D V+Y LI+ C KK DEA F EM ++ + P + +S LI GL
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 585
Query: 306 GSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNS 365
+ +++EA++F++ K NG P+ TY+ ++ C + R ++ DEM V PN+
Sbjct: 586 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 366 RTYDIILQP 374
Y+ +++
Sbjct: 646 VVYNHLIRA 654
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 133/278 (47%), Gaps = 2/278 (0%)
Query: 93 VLNKLSNAGVLALSFFHWAE-KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRK 151
+L+ L AG L +F E +G S++ LI ++ + +++M +R
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 152 LLTRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQ 210
L + T KV+EA++ ++ ++ G+ P+V ++ ++D CK++ E+ Q
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 211 ELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAY 270
E FD+M + + P+ Y L+ + + L E+ +MK + P+ TY LI
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 271 CKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPET 330
+ +EA + EM+ + + P+ ++ LI+G G ++ + + + P
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 750
Query: 331 PTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
TY ++G Y + +A R+++EM++ G+ P+S TY
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 109/243 (44%), Gaps = 1/243 (0%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVK 172
++G K ++ LI L + + + +D K+ +L T + +
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 627
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
E E F++M ++P +N L+ C+S + A EL + M+H+G+ P+ +YT L+
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+G S + + EM+ E EP+V Y LI+ Y K + + EM KN+
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ ++ +I G D + EA + + G P++ TY + Y + +A++
Sbjct: 748 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKG 807
Query: 353 VDE 355
DE
Sbjct: 808 SDE 810
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 107/227 (47%), Gaps = 10/227 (4%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A++ F + G+ P + N L+ L ++ +K E FD + +G+ PD+ +T +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV-CKGVSPDVYLFTTAIN 268
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ + + ++ +M+ P+VVT+ +I+ +YDEA F +M E+ M P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ +S L+ GL KR+ +A ++ GF P YN ++ ++ + ++ A +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 354 DEMKQCGVGPNSRTYDIIL-------QPDKGSKNPRSLL--GFPENE 391
D M G+ S TY+ ++ Q D + + +L GF N+
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 119/282 (42%), Gaps = 2/282 (0%)
Query: 93 VLNKLSNAGVLALSFFHWAE-KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRK 151
++ L+ A + ++F E +KGF + ++ LI++ + + + M +
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395
Query: 152 L-LTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQ 210
L LT T + A ++M G F ++ +LC + A
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455
Query: 211 ELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAY 270
+M R + P T L+ G + + E+ + + F D T L++
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515
Query: 271 CKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPET 330
C+A K DEA E+ + + ++TLI+G K+LDEA F ++ G P+
Sbjct: 516 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 575
Query: 331 PTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
TY+ ++ ++++A + D+ K+ G+ P+ TY +++
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 127/260 (48%), Gaps = 1/260 (0%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRK-LLTRDTXXXXXXXXXXXXKVK 172
KGF T + +AL+ L + + + + +++ R ++ R + K+
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA ++M K GLKP+ ++ L+ L VE+A + +D + G++PD+ +Y++++
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+G + + E EM + +P+ V Y LI AYC++ + A+ +M+ K +
Sbjct: 618 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ +++LI G+ R++EA +E+ + G P Y A++ Y +M +
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 737
Query: 353 VDEMKQCGVGPNSRTYDIIL 372
+ EM V PN TY +++
Sbjct: 738 LREMHSKNVHPNKITYTVMI 757
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 139/300 (46%), Gaps = 6/300 (2%)
Query: 85 VSPE--LVAEVLNKLSNAGVL--ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVI 140
VSP+ L +N G + A+ F E + G + +F+ +I+ LG ++
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKME-EAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 141 WNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDV 199
+ E M +R + T T ++ +A ++M K G P V +N L+D
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 200 LCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPD 259
++ S+ KA E+ D M +GL +Y L++G+ + + +EM F +
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 260 VVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYE 319
++ +I C +D A+ F EM +NM P + +TLI+GL + +ALE +
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 494
Query: 320 KFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQPDKGSK 379
+F GF +T T NA++ C + ++D+A+R+ E+ G + +Y+ ++ G K
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 102/204 (50%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K +A+E + + G + N L+ LC++ +++A + ++ RG V D SY
Sbjct: 485 KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYN 544
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G ++ L EM +PD TY ILI K +EA+ F+ + +
Sbjct: 545 TLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN 604
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
M+P + +S +I+G +R +E EF+++ + P T YN ++ AYC S R+ A
Sbjct: 605 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA 664
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
+ ++MK G+ PNS TY +++
Sbjct: 665 LELREDMKHKGISPNSATYTSLIK 688
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 105/205 (51%), Gaps = 18/205 (8%)
Query: 186 LKPEVSDFNKLVDVLC---KSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLL 242
++ ++SD L++V C K A ++F + ++G+ P + ILL +L+
Sbjct: 186 IRRKMSDL--LIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILL------TSLV 237
Query: 243 RVNEV--CRE---MKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
R NE C E + C+ PDV + INA+CK K +EAV + +M+E + P+
Sbjct: 238 RANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVT 297
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
F+T+I+GLG R DEA F EK G P TY+ +V + R+ DAY V+ EM
Sbjct: 298 FNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMT 357
Query: 358 QCGVGPNSRTYDIILQP--DKGSKN 380
+ G PN Y+ ++ + GS N
Sbjct: 358 KKGFPPNVIVYNNLIDSFIEAGSLN 382
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 94/189 (49%)
Query: 186 LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVN 245
+ P L+ LCK KA EL+ + ++G V D ++ LL G + L
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 246 EVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGL 305
+ +E+ D V+Y LI+ C KK DEA F EM ++ + P + +S LI GL
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 585
Query: 306 GSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNS 365
+ +++EA++F++ K NG P+ TY+ ++ C + R ++ DEM V PN+
Sbjct: 586 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 366 RTYDIILQP 374
Y+ +++
Sbjct: 646 VVYNHLIRA 654
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 133/278 (47%), Gaps = 2/278 (0%)
Query: 93 VLNKLSNAGVLALSFFHWAE-KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRK 151
+L+ L AG L +F E +G S++ LI ++ + +++M +R
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 152 LLTRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQ 210
L + T KV+EA++ ++ ++ G+ P+V ++ ++D CK++ E+ Q
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 211 ELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAY 270
E FD+M + + P+ Y L+ + + L E+ +MK + P+ TY LI
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 271 CKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPET 330
+ +EA + EM+ + + P+ ++ LI+G G ++ + + + P
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 750
Query: 331 PTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
TY ++G Y + +A R+++EM++ G+ P+S TY
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 109/243 (44%), Gaps = 1/243 (0%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVK 172
++G K ++ LI L + + + +D K+ +L T + +
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 627
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
E E F++M ++P +N L+ C+S + A EL + M+H+G+ P+ +YT L+
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+G S + + EM+ E EP+V Y LI+ Y K + + EM KN+
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ ++ +I G D + EA + + G P++ TY + Y + +A++
Sbjct: 748 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKG 807
Query: 353 VDE 355
DE
Sbjct: 808 SDE 810
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 107/227 (47%), Gaps = 10/227 (4%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A++ F + G+ P + N L+ L ++ +K E FD + +G+ PD+ +T +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV-CKGVSPDVYLFTTAIN 268
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ + + ++ +M+ P+VVT+ +I+ +YDEA F +M E+ M P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ +S L+ GL KR+ +A ++ GF P YN ++ ++ + ++ A +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 354 DEMKQCGVGPNSRTYDIIL-------QPDKGSKNPRSLL--GFPENE 391
D M G+ S TY+ ++ Q D + + +L GF N+
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 119/282 (42%), Gaps = 2/282 (0%)
Query: 93 VLNKLSNAGVLALSFFHWAE-KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRK 151
++ L+ A + ++F E +KGF + ++ LI++ + + + M +
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395
Query: 152 L-LTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQ 210
L LT T + A ++M G F ++ +LC + A
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455
Query: 211 ELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAY 270
+M R + P T L+ G + + E+ + + F D T L++
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515
Query: 271 CKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPET 330
C+A K DEA E+ + + ++TLI+G K+LDEA F ++ G P+
Sbjct: 516 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 575
Query: 331 PTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
TY+ ++ ++++A + D+ K+ G+ P+ TY +++
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 103/210 (49%), Gaps = 12/210 (5%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ +A M K G +P V +N L+D LCK+ + A EL ++M +GL D+ +Y
Sbjct: 156 RIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYN 215
Query: 230 ILLEG------WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFY 283
LL G WS +L R+M PDVVT+ LI+ + K DEA Y
Sbjct: 216 TLLTGLCYSGRWSDAARML------RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELY 269
Query: 284 HEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWS 343
EM + ++ P+ ++++INGL RL +A + ++ + G P TYN ++ +C
Sbjct: 270 KEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKF 329
Query: 344 MRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+D+ ++ M G + TY+ ++
Sbjct: 330 RMVDEGMKLFQRMSCEGFNADIFTYNTLIH 359
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+E +MEK GL +V +N L+ LC S A + M R + PD+ ++T L++
Sbjct: 195 ALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALID 254
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ +Q NL E+ +EM +P+ VTY +IN C + +A + M K P
Sbjct: 255 VFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFP 314
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ ++TLI+G + +DE ++ +++ GF + TYN ++ YC ++ A +
Sbjct: 315 NVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIF 374
Query: 354 DEMKQCGVGPNSRTYDIILQ 373
M V P+ T+ I+L
Sbjct: 375 CWMVSRRVTPDIITHCILLH 394
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ A+ KM K G +P + F L+ C + A L M G P++ Y
Sbjct: 121 RLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYN 180
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L++G + L E+ EM+ + DVVTY L+ C + ++ +A +M ++
Sbjct: 181 TLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKR 240
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++ P F+ LI+ LDEA E Y++ + P TYN+++ C R+ DA
Sbjct: 241 SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDA 300
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
+ D M G PN TY+ ++
Sbjct: 301 KKTFDLMASKGCFPNVVTYNTLIS 324
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 127/272 (46%), Gaps = 4/272 (1%)
Query: 103 LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXX 160
+AL + EK KG +++ L+ L ++ ++ DM +R + D T
Sbjct: 194 IALELLNEMEK-KGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSI-NPDVVTFTA 251
Query: 161 XXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRG 220
+ EA E +++M + + P +N +++ LC + A++ FD M +G
Sbjct: 252 LIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG 311
Query: 221 LVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAV 280
P++ +Y L+ G+ + + + ++ + M CE F D+ TY LI+ YC+ K A+
Sbjct: 312 CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVAL 371
Query: 281 GFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
+ M + + P L++GL + ++ AL ++ + + YN ++
Sbjct: 372 DIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGL 431
Query: 341 CWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
C + +++ A+ + + GV P++RTY I++
Sbjct: 432 CKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ ++A F +M P + DF +L+ + E KM G+ DL S+T
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL+ + + L V +M +EP +VT+G L++ +C + +A M +
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P+ +++TLI+GL + L+ ALE + + G + TYN ++ C+S R DA
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
R++ +M + + P+ T+ ++
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALI 253
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 101/216 (46%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ +A +TF+ M G P V +N L+ CK + V++ +LF +M G D+ +Y
Sbjct: 296 RLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYN 355
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G+ Q L ++ M PD++T+ IL++ C + + A+ + +M+E
Sbjct: 356 TLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRES 415
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++ +I+GL ++++A E + + G P+ TY ++ C + +A
Sbjct: 416 EKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREA 475
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQPDKGSKNPRSLL 385
++ MK+ G+ D L+ S SL+
Sbjct: 476 DELIRRMKEEGIICQMNAEDDHLEEHSSSNKEISLV 511
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 105/217 (48%)
Query: 155 RDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFD 214
RD+ K EA+E K+ + G+ + +N + L K K + +LF+
Sbjct: 407 RDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFE 466
Query: 215 KMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAK 274
KM+ G PD+ +Y IL+ + + + + E++ +PD+++Y LIN K
Sbjct: 467 KMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNG 526
Query: 275 KYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYN 334
DEA + EMQEK + P +STL+ G +R++ A +E+ G P TYN
Sbjct: 527 DVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYN 586
Query: 335 AVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDII 371
++ + R +A + +MKQ G+ P+S TY ++
Sbjct: 587 ILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 112/213 (52%), Gaps = 2/213 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V EA F M + +K E + +++ LC + +A E+ K+ +G+V D Y
Sbjct: 388 VSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNT 447
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+ + + + ++++ +MK + PD+ TY ILI ++ + + DEA+ + E++ +
Sbjct: 448 VFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSD 507
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P +++LIN LG + +DEA +++ + G P+ TY+ ++ + + R++ AY
Sbjct: 508 CKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAY 567
Query: 351 RVVDEMKQCGVGPNSRTYDIILQPDKGSKNPRS 383
+ +EM G PN TY+I+L D KN R+
Sbjct: 568 SLFEEMLVKGCQPNIVTYNILL--DCLEKNGRT 598
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 134/295 (45%), Gaps = 38/295 (12%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXK 170
++ G K +++ L++AL K + ++ EDMK+R RD T K
Sbjct: 230 RRGGHKLDIFAYNMLLDALAKDEKACQVF---EDMKKRHC-RRDEYTYTIMIRTMGRIGK 285
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
EAV F +M GL V +N L+ VL K K V+KA ++F +M G P+ +Y++
Sbjct: 286 CDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSL 345
Query: 231 LLEGWSQQQNLLRVNEVC----REMKCECFEPDVVT------------------------ 262
LL + L+R++ V R M + V T
Sbjct: 346 LLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKG 405
Query: 263 ----YGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFY 318
Y ++ + C A K EA+ ++ EK ++ +++T+ + LG K++ + +
Sbjct: 406 ERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLF 465
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
EK K +G +P+ TYN ++ ++ +D+A + +E+++ P+ +Y+ ++
Sbjct: 466 EKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLIN 520
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 132/294 (44%), Gaps = 24/294 (8%)
Query: 103 LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXX 162
LAL F W +Q+G+KH+ E++H +I+ ++ + L+E++
Sbjct: 90 LALDIFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFVETLIEEVIAGACEMSVPLYNCI 149
Query: 163 XXXXXXXKV--KEAVETFEKMEKYG-LKPEVSDFNKLVDVLCKSKS--------VEKAQE 211
K A + + KM + KP++ + L+ L K + + +
Sbjct: 150 IRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRS 209
Query: 212 LFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYC 271
L +M+ G++PD ++++ +++ + V +EM EP+ TY L+ C
Sbjct: 210 LTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVC 269
Query: 272 KAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETP 331
+ + + +GFY EMQ K M+P+ + LI L ++RLDEA+E AN +P+
Sbjct: 270 EKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDML 329
Query: 332 TYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQPDKGSKNPRSLL 385
TYN V+ C R +A +V+E K+ P G +N R+L+
Sbjct: 330 TYNTVLTELCRGGRGSEALEMVEEWKK-------------RDPVMGERNYRTLM 370
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 69/134 (51%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V EA+ F++M YG +P ++ LV +C+ V + + +M+ +G+VP+ Y
Sbjct: 238 EVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYM 297
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L+ S ++ L EV +M PD++TY ++ C+ + EA+ E +++
Sbjct: 298 VLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKR 357
Query: 290 NMMPSPHIFSTLIN 303
+ + + TL++
Sbjct: 358 DPVMGERNYRTLMD 371
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 148/310 (47%), Gaps = 6/310 (1%)
Query: 59 ADKICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFK 118
A + I ++ P S D L LS E++ ++V VLN G LA FF+WA KQ+G++
Sbjct: 45 AQNLIVIFTRQPFSPDDPELLILSPELNTKVVETVLNGFKRWG-LAYLFFNWASKQEGYR 103
Query: 119 HSTESFHALIEALGKIRQFKVIWNLVED-MKQRKLLTRDTXXXXXXXXXXXXKVKEAVET 177
+ +++A+ L + RQ + LV D + R ++ V EA
Sbjct: 104 NDMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSV 163
Query: 178 FEKMEKYGL-KPEVSDFNKLVDVLCKSKS--VEKAQELFDKMRHRGLVPDLKSYTILLEG 234
F+++ + GL P +N L++ + KS S VE + +MR G D + T +L+
Sbjct: 164 FDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQV 223
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
+ R V E+ + + ++ IL+ ++CK + D+A ++E+++ +
Sbjct: 224 YCNTGKSERALSVFNEILSRGWLDEHIST-ILVVSFCKWGQVDKAFELIEMLEERDIRLN 282
Query: 295 PHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD 354
+ LI+G + R+D+A + +EK + G + Y+ ++G C ++ A +
Sbjct: 283 YKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYL 342
Query: 355 EMKQCGVGPN 364
E+K+ G+ P+
Sbjct: 343 EIKRSGIPPD 352
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A++ +KM YG +P + LV LC++ A + D + G + + + T ++
Sbjct: 528 ALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAID 587
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G + + + R E+ R++ PDV+ Y +LI A CKA + EA ++EM K + P
Sbjct: 588 GLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKP 647
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ ++++I+G + +D L + + P+ TY +++ C S R +A
Sbjct: 648 TVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRW 707
Query: 354 DEMKQCGVGPNSRTYDIILQ 373
+EMK PN T+ ++Q
Sbjct: 708 NEMKGKDCYPNRITFMALIQ 727
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 103/209 (49%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V +E F + G P+V ++ L+ LCK+ +A LF++M +GL P + +Y
Sbjct: 595 VDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNS 654
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+++GW ++ + R M + PDV+TY LI+ C + + EA+ ++EM+ K+
Sbjct: 655 MIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKD 714
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P+ F LI GL EAL ++ + + P++ Y ++V ++ S ++ +
Sbjct: 715 CYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGF 774
Query: 351 RVVDEMKQCGVGPNSRTYDIILQPDKGSK 379
+ EM G P S + +L + SK
Sbjct: 775 GIFREMVHKGRFPVSVDRNYMLAVNVTSK 803
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 116/295 (39%), Gaps = 57/295 (19%)
Query: 102 VLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXX 160
+L +SF W + K F+ L+E +++R + L T
Sbjct: 253 ILVVSFCKWGQVDKAFE------------------------LIEMLEERDIRLNYKTYCV 288
Query: 161 XXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRG 220
++ +A + FEKM + G+ +++ ++ L+ LCK K +E A L+ +++ G
Sbjct: 289 LIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSG 348
Query: 221 LVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDV------VTYGILINAYCKAK 274
+ PD LL +S++ L R+ EV D+ + Y L + +
Sbjct: 349 IPPDRGILGKLLCSFSEESELSRITEV--------IIGDIDKKSVMLLYKSLFEGFIRND 400
Query: 275 KYDEAVGFYHEM------------------QEKNMMPSPHIFSTLINGLGSDKRLDEALE 316
EA F + K ++P S +IN L ++D A+
Sbjct: 401 LVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVT 460
Query: 317 FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDII 371
NG P YN ++ C R +++ +++ EMK GV P+ T + I
Sbjct: 461 LLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCI 515
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 103/230 (44%)
Query: 140 IWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDV 199
I L++D + L D+ KV AV + + GL P +N +++
Sbjct: 424 IVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEG 483
Query: 200 LCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPD 259
+CK E++ +L +M+ G+ P + + +++ + + ++ ++M+ FEP
Sbjct: 484 MCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPW 543
Query: 260 VVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYE 319
+ L+ C+ + +A + ++ + + + I+GL ++ +D LE +
Sbjct: 544 IKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFR 603
Query: 320 KFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYD 369
ANG P+ Y+ ++ A C + R +A + +EM G+ P TY+
Sbjct: 604 DICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYN 653
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 81/172 (47%)
Query: 197 VDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECF 256
+D L K++ V++ ELF + G PD+ +Y +L++ + + + + EM +
Sbjct: 586 IDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGL 645
Query: 257 EPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALE 316
+P V TY +I+ +CK + D + M E P +++LI+GL + R EA+
Sbjct: 646 KPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIF 705
Query: 317 FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
+ + K P T+ A++ C +A EM++ + P+S Y
Sbjct: 706 RWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 8/183 (4%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ EA F +M GLKP V+ +N ++D CK +++ +M PD+ +YT
Sbjct: 629 RTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYT 688
Query: 230 ILLEGWSQQ----QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHE 285
L+ G + + R NE MK + P+ +T+ LI CK EA+ ++ E
Sbjct: 689 SLIHGLCASGRPSEAIFRWNE----MKGKDCYPNRITFMALIQGLCKCGWSGEALVYFRE 744
Query: 286 MQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMR 345
M+EK M P ++ +L++ S + ++ + + G P + N ++ S
Sbjct: 745 MEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYMLAVNVTSKF 804
Query: 346 MDD 348
++D
Sbjct: 805 VED 807
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 113/267 (42%), Gaps = 22/267 (8%)
Query: 65 ILSKS-PNSTIDAALADL---SVEVSPELVAEVLNKLSNAGVL--ALSFFHWAEKQKGFK 118
ILS++ N+++ A + D+ +SP + L NAG++ A S F +
Sbjct: 115 ILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCV 174
Query: 119 HSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--------TXXXXXXXXXXXXK 170
+ +++ L+EA+ K + VE ++ R RD T K
Sbjct: 175 PNAYTYNCLLEAISKSNS-----SSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGK 229
Query: 171 VKEAVETFEKMEKYG-LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ A+ F ++ G L +S LV CK V+KA EL + + R + + K+Y
Sbjct: 230 SERALSVFNEILSRGWLDEHISTI--LVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYC 287
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L+ G+ ++ + + ++ +M+ D+ Y +LI CK K + A+ Y E++
Sbjct: 288 VLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRS 347
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALE 316
+ P I L+ + L E
Sbjct: 348 GIPPDRGILGKLLCSFSEESELSRITE 374
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 132/309 (42%), Gaps = 40/309 (12%)
Query: 104 ALSFFHW---AEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMK-QRKLLTRDTXX 159
A+ F W + K + + LG+ Q+ V L++ + Q LL
Sbjct: 155 AVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYT 214
Query: 160 XXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCK-SKSVEKAQELFDKMRH 218
K ++A++ FE+M++ G P + +N ++DV K +S K + D+MR
Sbjct: 215 TILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRS 274
Query: 219 RGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDE 278
+GL D + + +L +++ L E E+K +EP VTY L+ + KA Y E
Sbjct: 275 KGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTE 334
Query: 279 AVGFYHEMQE-----------------------------------KNMMPSPHIFSTLIN 303
A+ EM+E K +MP+ ++T+I+
Sbjct: 335 ALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVID 394
Query: 304 GLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGP 363
G + DEAL+ + K G P T TYNAV+ R ++ +++ +MK G P
Sbjct: 395 AYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSP 454
Query: 364 NSRTYDIIL 372
N T++ +L
Sbjct: 455 NRATWNTML 463
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 112/246 (45%), Gaps = 1/246 (0%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVK 172
K KGFK + S+ +++ K + I + +K+ ++ +
Sbjct: 553 KSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRAL 612
Query: 173 EAVE-TFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
E F +K+G KP++ FN ++ + ++ ++A+ + + +R GL PDL +Y L
Sbjct: 613 AGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSL 672
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++ + ++ + E+ + ++ +PD+V+Y +I +C+ EAV EM E+ +
Sbjct: 673 MDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGI 732
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P ++T ++G + E + E N P T+ VV YC + + +A
Sbjct: 733 RPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMD 792
Query: 352 VVDEMK 357
V ++K
Sbjct: 793 FVSKIK 798
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 128/289 (44%), Gaps = 10/289 (3%)
Query: 91 AEVLNKLSNAGVLALSFFHWAE-KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQ 149
+ VL+ + G+L + +AE K G++ T +++AL++ GK + +++++M++
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 150 RKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEK 208
T KEA E M K G+ P + ++D K+ ++
Sbjct: 345 NSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDE 404
Query: 209 AQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCR---EMKCECFEPDVVTYGI 265
A +LF M+ G VP+ +Y +L ++ R NE+ + +MK P+ T+
Sbjct: 405 ALKLFYSMKEAGCVPNTCTYNAVLSLLGKKS---RSNEMIKMLCDMKSNGCSPNRATWNT 461
Query: 266 LINAYCKAKKYDEAVG-FYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKAN 324
++ A C K D+ V + EM+ P F+TLI+ G +A + Y +
Sbjct: 462 ML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRA 520
Query: 325 GFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
GF TYNA++ A V+ +MK G P +Y ++LQ
Sbjct: 521 GFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQ 569
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 121/270 (44%), Gaps = 2/270 (0%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXX 162
AL F ++ K+ G +T +++A++ LGK + + ++ DMK R T
Sbjct: 405 ALKLF-YSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML 463
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
K F +M+ G +P+ FN L+ + S A +++ +M G
Sbjct: 464 ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFN 523
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
+ +Y LL +++ + V +MK + F+P +Y +++ Y K Y
Sbjct: 524 ACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERI 583
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
+ ++E + PS + TL+ + L + + FK +G+ P+ +N+++ +
Sbjct: 584 ENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTR 643
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+ D A +++ +++ G+ P+ TY+ ++
Sbjct: 644 NNMYDQAEGILESIREDGLSPDLVTYNSLM 673
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/260 (18%), Positives = 105/260 (40%), Gaps = 1/260 (0%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKE 173
+ GF +++AL+ AL + ++ N++ DMK + +T
Sbjct: 519 RAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYL 578
Query: 174 AVETFEKMEKYG-LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+E E K G + P L+ K +++ ++ F + G PD+ + +L
Sbjct: 579 GIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSML 638
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+++ + + ++ + PD+VTY L++ Y + + +A +++ +
Sbjct: 639 SIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLK 698
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P ++T+I G + EA+ + G P TYN V Y + V
Sbjct: 699 PDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDV 758
Query: 353 VDEMKQCGVGPNSRTYDIIL 372
++ M + PN T+ +++
Sbjct: 759 IECMAKNDCRPNELTFKMVV 778
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 137/292 (46%), Gaps = 43/292 (14%)
Query: 124 FHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKM- 181
F+AL+ LG+ + +LV M + K+ T +V EA+E FE+M
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 182 -----EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMR-HRGLVPDLKSYTILLEGW 235
+ +K + FN L+D LCK +++A+EL +M+ VP+ +Y L++G+
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 236 SQ-------------------QQNLLRVNEV----CR------------EMKCECFEPDV 260
+ + N++ VN + CR +M+ E + +V
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 261 VTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEK 320
VTY LI+A C ++A+ +Y +M E P I+ LI+GL +R +A+ EK
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 321 FKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
K GF+ + YN ++G +C + Y ++ +M++ G P+S TY+ ++
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLI 588
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 1/200 (0%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
AV F MEK G+K V + L+ C +VEKA ++KM G PD K Y L+
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G Q + V ++K F D++ Y +LI +C ++ +M+++ P
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKP 579
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
++TLI+ G K + E+ + +G P TY AV+ AYC +D+A ++
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 354 DEMK-QCGVGPNSRTYDIIL 372
+M V PN+ Y+I++
Sbjct: 640 KDMGLHSKVNPNTVIYNILI 659
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 1/207 (0%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+A+ EK+++ G ++ +N L+ + C + EK E+ M G PD +Y L+
Sbjct: 529 DAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLI 588
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ-EKNM 291
+ + ++ V + +M+ + +P V TYG +I+AYC + DEA+ + +M +
Sbjct: 589 SFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKV 648
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P+ I++ LIN +AL E+ K P TYNA+ + + +
Sbjct: 649 NPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLK 708
Query: 352 VVDEMKQCGVGPNSRTYDIILQPDKGS 378
++DEM + PN T +I+++ GS
Sbjct: 709 LMDEMVEQSCEPNQITMEILMERLSGS 735
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 7/205 (3%)
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
+ + +G+ P + + LCK+ A ++ + + + LL
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSC 303
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK----- 289
+ ++ R+N++ +M PDVVT GILIN CK+++ DEA+ + +M+ K
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDG 363
Query: 290 NMMPSPHI-FSTLINGLGSDKRLDEALEFYEKFK-ANGFAPETPTYNAVVGAYCWSMRMD 347
N++ + I F+TLI+GL RL EA E + K P TYN ++ YC + +++
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLE 423
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIIL 372
A VV MK+ + PN T + I+
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIV 448
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 102/204 (50%), Gaps = 1/204 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V++A+ +EKM + G P+ + L+ LC+ + A + +K++ G DL +Y +
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ + + N +V E+ +M+ E +PD +TY LI+ + K K ++ +M+E
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANG-FAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ + +I+ S LDEAL+ ++ + P T YN ++ A+ A
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
+ +EMK V PN TY+ + +
Sbjct: 672 LSLKEEMKMKMVRPNVETYNALFK 695
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 95/225 (42%), Gaps = 7/225 (3%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVK 172
K+ GF +++ LI + ++ ++ DM++ K
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF 597
Query: 173 EAVE-TFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMR-HRGLVPDLKSYTI 230
E+VE E+M + GL P V+ + ++D C +++A +LF M H + P+ Y I
Sbjct: 598 ESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ +S+ N + + EMK + P+V TY L + + + + EM E++
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQS 717
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNA 335
P+ L+ L L + +F + G++ +PT A
Sbjct: 718 CEPNQITMEILMERLSGSDELVKLRKFMQ-----GYSVASPTEKA 757
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 136/292 (46%), Gaps = 43/292 (14%)
Query: 124 FHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKM- 181
F+AL+ LG+ + +LV M + K+ T +V EA+E FEKM
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMR 356
Query: 182 -----EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMR-HRGLVPDLKSYTILLEGW 235
+ +K + FN L+D LCK +++A+EL +M+ P+ +Y L++G+
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGY 416
Query: 236 SQ-------------------QQNLLRVNEV----CR------------EMKCECFEPDV 260
+ + N++ VN + CR +M+ E + +V
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 261 VTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEK 320
VTY LI+A C ++A+ +Y +M E P I+ LI+GL +R +A+ EK
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 321 FKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
K GF+ + YN ++G +C + Y ++ +M++ G P+S TY+ ++
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLI 588
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 1/201 (0%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
AV F MEK G+K V + L+ C +VEKA ++KM G PD K Y L+
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G Q + V ++K F D++ Y +LI +C ++ +M+++ P
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKP 579
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
++TLI+ G K + E+ + +G P TY AV+ AYC +D+A ++
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 354 DEMK-QCGVGPNSRTYDIILQ 373
+M V PN+ Y+I++
Sbjct: 640 KDMGLHSKVNPNTVIYNILIN 660
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 1/207 (0%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+A+ EK+++ G ++ +N L+ + C + EK E+ M G PD +Y L+
Sbjct: 529 DAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLI 588
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ-EKNM 291
+ + ++ V + +M+ + +P V TYG +I+AYC + DEA+ + +M +
Sbjct: 589 SFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKV 648
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P+ I++ LIN +AL E+ K P TYNA+ + + +
Sbjct: 649 NPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLK 708
Query: 352 VVDEMKQCGVGPNSRTYDIILQPDKGS 378
++DEM + PN T +I+++ GS
Sbjct: 709 LMDEMVEQSCEPNQITMEILMERLSGS 735
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 7/205 (3%)
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
+ + +G+ P + + LCK+ A ++ + + + LL
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSC 303
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK----- 289
+ ++ R+N++ +M PDVVT GILIN CK+++ DEA+ + +M+ K
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDG 363
Query: 290 NMMPSPHI-FSTLINGLGSDKRLDEALEFYEKFK-ANGFAPETPTYNAVVGAYCWSMRMD 347
N++ + I F+TLI+GL RL EA E + K AP TYN ++ YC + +++
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLE 423
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIIL 372
A VV MK+ + PN T + I+
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIV 448
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 102/204 (50%), Gaps = 1/204 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V++A+ +EKM + G P+ + L+ LC+ + A + +K++ G DL +Y +
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ + + N +V E+ +M+ E +PD +TY LI+ + K K ++ +M+E
Sbjct: 552 LIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANG-FAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ + +I+ S LDEAL+ ++ + P T YN ++ A+ A
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
+ +EMK V PN TY+ + +
Sbjct: 672 LSLKEEMKMKMVRPNVETYNALFK 695
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 95/225 (42%), Gaps = 7/225 (3%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVK 172
K+ GF +++ LI + ++ ++ DM++ K
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF 597
Query: 173 EAVE-TFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMR-HRGLVPDLKSYTI 230
E+VE E+M + GL P V+ + ++D C +++A +LF M H + P+ Y I
Sbjct: 598 ESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ +S+ N + + EMK + P+V TY L + + + + EM E++
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQS 717
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNA 335
P+ L+ L L + +F + G++ +PT A
Sbjct: 718 CEPNQITMEILMERLSGSDELVKLRKFMQ-----GYSVASPTEKA 757
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 137/292 (46%), Gaps = 43/292 (14%)
Query: 124 FHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKM- 181
F+AL+ LG+ + +LV M + K+ T +V EA+E FE+M
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 182 -----EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMR-HRGLVPDLKSYTILLEGW 235
+ +K + FN L+D LCK +++A+EL +M+ VP+ +Y L++G+
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 236 SQ-------------------QQNLLRVNEV----CR------------EMKCECFEPDV 260
+ + N++ VN + CR +M+ E + +V
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 261 VTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEK 320
VTY LI+A C ++A+ +Y +M E P I+ LI+GL +R +A+ EK
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 321 FKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
K GF+ + YN ++G +C + Y ++ +M++ G P+S TY+ ++
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLI 588
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 1/201 (0%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
AV F MEK G+K V + L+ C +VEKA ++KM G PD K Y L+
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G Q + V ++K F D++ Y +LI +C ++ +M+++ P
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKP 579
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
++TLI+ G K + E+ + +G P TY AV+ AYC +D+A ++
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 354 DEMK-QCGVGPNSRTYDIILQ 373
+M V PN+ Y+I++
Sbjct: 640 KDMGLHSKVNPNTVIYNILIN 660
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 7/205 (3%)
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
+ + +G+ P + + LCK+ A ++ + + + LL
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSC 303
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK----- 289
+ ++ R+N++ +M PDVVT GILIN CK+++ DEA+ + +M+ K
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDG 363
Query: 290 NMMPSPHI-FSTLINGLGSDKRLDEALEFYEKFK-ANGFAPETPTYNAVVGAYCWSMRMD 347
N++ + I F+TLI+GL RL EA E + K P TYN ++ YC + +++
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLE 423
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIIL 372
A VV MK+ + PN T + I+
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIV 448
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 1/185 (0%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+A+ EK+++ G ++ +N L+ + C + EK E+ M G PD +Y L+
Sbjct: 529 DAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLI 588
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ-EKNM 291
+ + ++ V + +M+ + +P V TYG +I+AYC + DEA+ + +M +
Sbjct: 589 SFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKV 648
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P+ I++ LIN +AL E+ K P TYNA+ + + +
Sbjct: 649 NPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLK 708
Query: 352 VVDEM 356
++DEM
Sbjct: 709 LMDEM 713
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 102/204 (50%), Gaps = 1/204 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V++A+ +EKM + G P+ + L+ LC+ + A + +K++ G DL +Y +
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ + + N +V E+ +M+ E +PD +TY LI+ + K K ++ +M+E
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANG-FAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ + +I+ S LDEAL+ ++ + P T YN ++ A+ A
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
+ +EMK V PN TY+ + +
Sbjct: 672 LSLKEEMKMKMVRPNVETYNALFK 695
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 17/223 (7%)
Query: 108 FHWAEK--QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR----KLLTRDTXXXX 161
+W EK + G + ++ALI L ++R+ +VE +K+ LL +
Sbjct: 496 MYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGL 555
Query: 162 XXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGL 221
KV E MEK G KP+ +N L+ K K E + + ++MR GL
Sbjct: 556 FCDKNNAEKV---YEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 222 VPDLKSYTILLEGWSQQQNLLRVNEVCREMKCEC-FEPDVVTYGILINAYCKAKKYDEAV 280
P + +Y +++ + L ++ ++M P+ V Y ILINA+ K + +A+
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQAL 672
Query: 281 GFYHEMQEKNMMPSPHIFSTLINGLGSD-------KRLDEALE 316
EM+ K + P+ ++ L L K +DE +E
Sbjct: 673 SLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 97/198 (48%), Gaps = 1/198 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V A + F++M + G + +L+ L ++K +++A L KM+ P++++YT
Sbjct: 205 EVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYT 264
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L++ + ++M +PD Y +LI ++C DEA G M E
Sbjct: 265 VLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLEN 324
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+MP+ ++ LI G K + +A+ K P+ TYN ++ C S +D A
Sbjct: 325 GLMPNVITYNALIKGF-CKKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSA 383
Query: 350 YRVVDEMKQCGVGPNSRT 367
YR++ M++ G+ PN RT
Sbjct: 384 YRLLSLMEESGLVPNQRT 401
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 131/296 (44%), Gaps = 26/296 (8%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHAL--------------------IEALGKIRQFKVIWNL 143
ALSF W + FKH+ S+ +L I++ +R + +
Sbjct: 43 ALSFSDWISRIPNFKHNVTSYASLVTLLCSQEIPYEVPKITILMIKSCNSVRDALFVVDF 102
Query: 144 VEDMKQ------RKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLV 197
M++ + LT V+E + +M + + P++ FN LV
Sbjct: 103 CRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLV 162
Query: 198 DVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFE 257
+ CK V +A++ + G PD +YT + G +++ + +V +EM
Sbjct: 163 NGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCH 222
Query: 258 PDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEF 317
+ V+Y LI +AKK DEA+ +M++ N P+ ++ LI+ L + EA+
Sbjct: 223 RNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNL 282
Query: 318 YEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+++ +G P+ Y ++ ++C +D+A +++ M + G+ PN TY+ +++
Sbjct: 283 FKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIK 338
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 125/259 (48%), Gaps = 1/259 (0%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKE 173
KG K +++ +I A K R F + +++ MK+ ++ + T K+ +
Sbjct: 253 KGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSD 312
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A + F++M + G++ +V + L+ C+ ++++A LFD++ +GL P +Y L++
Sbjct: 313 AEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALID 372
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G + + + EM+ + V + LI+ YC+ DEA Y M++K
Sbjct: 373 GVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQA 432
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+T+ + KR DEA ++ + G T +Y ++ YC +++A R+
Sbjct: 433 DVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLF 492
Query: 354 DEMKQCGVGPNSRTYDIIL 372
EM GV PN+ TY++++
Sbjct: 493 VEMSSKGVQPNAITYNVMI 511
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 131/274 (47%), Gaps = 2/274 (0%)
Query: 101 GVLALSFFHWAE-KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTX 158
G + +F + E +KG S+ ++ ALI+ + K+ + L+ +M+ + + +T+
Sbjct: 343 GNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF 402
Query: 159 XXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRH 218
V EA ++ ME+ G + +V N + + K ++A++ +M
Sbjct: 403 NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMME 462
Query: 219 RGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDE 278
G+ SYT L++ + ++ N+ + EM + +P+ +TY ++I AYCK K E
Sbjct: 463 GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKE 522
Query: 279 AVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVG 338
A M+ M P + +++LI+G +DEA+ + + G + TY ++
Sbjct: 523 ARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMIS 582
Query: 339 AYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+ + D+A+ + DEMK+ G +++ Y ++
Sbjct: 583 GLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 129/276 (46%), Gaps = 23/276 (8%)
Query: 69 SPNSTIDAALADLSVEVSPELVAEVL-NKLSNAGVLALSFFHWAEKQKGFKHSTESFHAL 127
SP+S AL D +V AE+L N++ + KG + F+ L
Sbjct: 361 SPSSYTYGALIDGVCKVGEMGAAEILMNEM---------------QSKGVNITQVVFNTL 405
Query: 128 IEAL---GKIRQFKVIWNLVEDMK-QRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEK 183
I+ G + + +I++++E Q + T +T + EA + +M +
Sbjct: 406 IDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLK---RYDEAKQWLFRMME 462
Query: 184 YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLR 243
G+K + L+DV CK +VE+A+ LF +M +G+ P+ +Y +++ + +Q +
Sbjct: 463 GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKE 522
Query: 244 VNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLIN 303
++ M+ +PD TY LI+ C A DEA+ + EM K + + ++ +I+
Sbjct: 523 ARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMIS 582
Query: 304 GLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
GL + DEA Y++ K G+ + Y A++G+
Sbjct: 583 GLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 100/203 (49%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ +E F +M G+K V +V+ LC+ VEK+++L + +G+ P+ +Y
Sbjct: 204 RIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYN 263
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ + +Q++ V V + MK + + VTY +L+ K K +A + EM+E+
Sbjct: 264 TIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRER 323
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ H++++LI+ + A +++ G +P + TY A++ C M A
Sbjct: 324 GIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAA 383
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
+++EM+ GV ++ ++
Sbjct: 384 EILMNEMQSKGVNITQVVFNTLI 406
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 109/251 (43%), Gaps = 4/251 (1%)
Query: 60 DKICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVL-ALSFFHWAEKQKGFK 118
D +CK+ + + V ++ + +++ G++ S + +QKGF+
Sbjct: 372 DGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQ 431
Query: 119 HSTESFHALIEALGKIRQFKVI--WNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVE 176
+ + + +++++ W L M+ L+ + V+EA
Sbjct: 432 ADVFTCNTIASCFNRLKRYDEAKQW-LFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKR 490
Query: 177 TFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWS 236
F +M G++P +N ++ CK +++A++L M G+ PD +YT L+ G
Sbjct: 491 LFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGEC 550
Query: 237 QQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPH 296
N+ + EM + + + VTY ++I+ KA K DEA G Y EM+ K
Sbjct: 551 IADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNK 610
Query: 297 IFSTLINGLGS 307
+++ LI + S
Sbjct: 611 VYTALIGSMHS 621
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 97/201 (48%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+E + F+ M K GL + + K + ++ E+F +M G+ + S TI+
Sbjct: 171 EEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIV 230
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+EG ++ + + ++ +E + +P+ TY +INAY K + + G M++ +
Sbjct: 231 VEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGV 290
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
+ + ++ L+ + ++ +A + +++ + G + Y +++ C M A+
Sbjct: 291 VYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFL 350
Query: 352 VVDEMKQCGVGPNSRTYDIIL 372
+ DE+ + G+ P+S TY ++
Sbjct: 351 LFDELTEKGLSPSSYTYGALI 371
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 79/184 (42%), Gaps = 1/184 (0%)
Query: 207 EKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGIL 266
E+ +FD M +GL D +S + L +++ + E+ R M + V + I+
Sbjct: 171 EEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIV 230
Query: 267 INAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGF 326
+ C+ + +++ E K + P + ++T+IN + + K +G
Sbjct: 231 VEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGV 290
Query: 327 APETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQPDKGSKN-PRSLL 385
TY ++ + +M DA ++ DEM++ G+ + Y ++ + N R+ L
Sbjct: 291 VYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFL 350
Query: 386 GFPE 389
F E
Sbjct: 351 LFDE 354
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 137/273 (50%), Gaps = 11/273 (4%)
Query: 111 AEKQKGFKHSTES---------FHALIEALGKIRQFKVIWNLVEDMKQ-RKLLTRDTXXX 160
+K + FK S ES + A I L + ++F I +++ K+ + + D
Sbjct: 68 TQKVEKFKRSCESESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIR 127
Query: 161 XXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHR- 219
+ A + F++M + + V FN L+ SK +++A + F ++ +
Sbjct: 128 IMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKL 187
Query: 220 GLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEA 279
G+ PDL +Y +++ ++ ++ + + E++ FEPD++++ L+ + + + + E
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG 247
Query: 280 VGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
+ M+ KN+ P+ +++ + GL +K+ +AL + K G +P+ TYNA++ A
Sbjct: 248 DRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITA 307
Query: 340 YCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
Y +++ + +EMK+ G+ P++ TY +++
Sbjct: 308 YRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLI 340
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 99/187 (52%), Gaps = 1/187 (0%)
Query: 170 KVKEAVETFEKM-EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
K+ EA++TF+++ EK G+ P++ +N ++ LC+ S++ +F+++ G PDL S+
Sbjct: 172 KLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISF 231
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
LLE + +++ + + + MK + P++ +Y + + KK+ +A+ M+
Sbjct: 232 NTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKT 291
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
+ + P H ++ LI D L+E ++ Y + K G P+T TY ++ C +D
Sbjct: 292 EGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDR 351
Query: 349 AYRVVDE 355
A V +E
Sbjct: 352 AVEVSEE 358
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 110/238 (46%), Gaps = 2/238 (0%)
Query: 118 KHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXKVKEAV 175
+ + +SF+AL+ A ++ +++ ++ +T D T + + +
Sbjct: 154 ERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDIL 213
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
FE++EK G +P++ FN L++ + + + ++D M+ + L P+++SY + G
Sbjct: 214 SIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGL 273
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSP 295
++ + + MK E PDV TY LI AY +E + Y+EM+EK + P
Sbjct: 274 TRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDT 333
Query: 296 HIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ LI L LD A+E E+ + Y VV + ++D+A ++V
Sbjct: 334 VTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLV 391
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
E ++ M+ L P + +N V L ++K A L D M+ G+ PD+ +Y L+
Sbjct: 246 EGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALI 305
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ NL V + EMK + PD VTY +LI CK D AV E + ++
Sbjct: 306 TAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLL 365
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNA 335
P+++ ++ L ++DEA + + K + P +A
Sbjct: 366 SRPNMYKPVVERLMGAGKIDEATQLVKNGKLQSYFRYLPDLSA 408
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 228 YTILLEGWSQQQNLLRVNEVCREMKC--ECFEPDVVTYGILINAYCKAKKYDEAVGFYHE 285
Y+ + + + ++EV + K + D V +L+ Y ++ A + E
Sbjct: 90 YSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEH--AHKLFDE 147
Query: 286 MQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKAN-GFAPETPTYNAVVGAYCWSM 344
M E N + F+ L++ + K+LDEA++ +++ G P+ TYN ++ A C
Sbjct: 148 MPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKG 207
Query: 345 RMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
MDD + +E+++ G P+ +++ +L+
Sbjct: 208 SMDDILSIFEELEKNGFEPDLISFNTLLE 236
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 23/227 (10%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRG--------- 220
++ EA E KM + G + N +VD LC S ++KA E+ MR G
Sbjct: 446 RISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGN 505
Query: 221 --------------LVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGIL 266
+PDL +Y+ LL G + + EM E +PD V Y I
Sbjct: 506 SYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIF 565
Query: 267 INAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGF 326
I+ +CK K A +M++K S +++LI GLG ++ E ++ K G
Sbjct: 566 IHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGI 625
Query: 327 APETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+P TYN + C +++DA ++DEM Q + PN ++ +++
Sbjct: 626 SPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIE 672
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 87/190 (45%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+++A FE + + + +N + L + +A+ + +M +G+ P + SY I
Sbjct: 307 LEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNI 366
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++G + L + MK PD VTYG L++ YC K D A EM N
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+P+ + + L++ L R+ EA E K G+ +T T N +V C S +D A
Sbjct: 427 CLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAI 486
Query: 351 RVVDEMKQCG 360
+V M+ G
Sbjct: 487 EIVKGMRVHG 496
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 99/191 (51%), Gaps = 4/191 (2%)
Query: 187 KPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNE 246
KP V +N L++ K + VE L+ M G+ P ++ +L+ + E
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 247 VCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLG 306
+ EM + +P+ T+GIL+ YCKA D+ + + M+ ++P+ I++T+++
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 307 SDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM---KQCGV-G 362
+ R D++ + EK + G P+ T+N+ + A C ++ DA R+ +M + G+
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 363 PNSRTYDIILQ 373
PNS TY+++L+
Sbjct: 289 PNSITYNLMLK 299
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 106/261 (40%), Gaps = 58/261 (22%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K EA ++M G+ P + +N L+D LCK + A+ + M+ G+ PD +Y
Sbjct: 341 KFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYG 400
Query: 230 ILLEGW----------SQQQNLLRVN-------------------------EVCREMKCE 254
LL G+ S Q ++R N E+ R+M +
Sbjct: 401 CLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEK 460
Query: 255 CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ-----------------------EKNM 291
+ D VT I+++ C + + D+A+ M+ E N
Sbjct: 461 GYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNC 520
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
+P +STL+NGL R EA + + P++ YN + +C ++ A+R
Sbjct: 521 LPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFR 580
Query: 352 VVDEMKQCGVGPNSRTYDIIL 372
V+ +M++ G + TY+ ++
Sbjct: 581 VLKDMEKKGCHKSLETYNSLI 601
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 101/242 (41%), Gaps = 39/242 (16%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFD---------------- 214
V A E F++M + G KP F LV CK+ +K EL +
Sbjct: 163 VDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNT 222
Query: 215 -------------------KMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCEC 255
KMR GLVPD+ ++ + ++ +L + + +M+ +
Sbjct: 223 IVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDE 282
Query: 256 F----EPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRL 311
+ P+ +TY +++ +CK ++A + ++E + + S ++ + GL +
Sbjct: 283 YLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKF 342
Query: 312 DEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDII 371
EA ++ G P +YN ++ C + DA +V MK+ GV P++ TY +
Sbjct: 343 IEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCL 402
Query: 372 LQ 373
L
Sbjct: 403 LH 404
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ EA F +M L+P+ +N + CK + A + M +G L++Y
Sbjct: 539 RFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYN 598
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G + + ++ + EMK + P++ TY I C+ +K ++A EM +K
Sbjct: 599 SLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQK 658
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYE 319
N+ P+ F LI D A E +E
Sbjct: 659 NIAPNVFSFKYLIEAFCKVPDFDMAQEVFE 688
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 12/215 (5%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKV 171
++KG S E++++LI LG Q I L+++MK++ + T KV
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKV 645
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM-----RHRGLVPDLK 226
++A ++M + + P V F L++ CK + AQE+F+ + GL
Sbjct: 646 EDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL----- 700
Query: 227 SYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
Y+++ LL+ E+ + FE Y L+ + CK + + A G H+M
Sbjct: 701 -YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKM 759
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKF 321
++ P +I+GLG EA F +K
Sbjct: 760 IDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKM 794
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 98/241 (40%), Gaps = 2/241 (0%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXX-XXXXKVKEAVETFEKM 181
++ L+ L K +F NL +M KL K+ A + M
Sbjct: 526 TYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDM 585
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
EK G + +N L+ L + + L D+M+ +G+ P++ +Y ++ + + +
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKV 645
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
+ EM + P+V ++ LI A+CK +D A + E ++S +
Sbjct: 646 EDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF-ETAVSICGQKEGLYSLM 704
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
N L + +L +A E E GF T Y +V + C ++ A ++ +M G
Sbjct: 705 FNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGY 764
Query: 362 G 362
G
Sbjct: 765 G 765
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 162/381 (42%), Gaps = 49/381 (12%)
Query: 51 TLIP-HTPHADKICKILSK---SPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALS 106
T+ P + H ++C IL + SP+S + + L+ +++ E +V N +
Sbjct: 37 TITPINQDHLLRVCTILYQQQNSPDSRLVSKLSSTKFQLTHEFFLQVCNNFPLSWRPVHR 96
Query: 107 FFHWAEKQK-GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXX 165
FF +++ F H++ + + ++ +G R + W L +++ +R L+ T
Sbjct: 97 FFLYSQTHHPDFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGLVNDKTFRIVLKTL 156
Query: 166 XXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDL 225
++K+ V F M +G V N+ V+ LCK K VE+A+ +F K++ + PD
Sbjct: 157 ASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKE-FIKPDE 215
Query: 226 KSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVT----------------------- 262
+Y +++G+ +L+ ++ M E F+ D+
Sbjct: 216 ITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYV 275
Query: 263 -------------YGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDK 309
Y ++I+ CK + D A + EM+E+ + +++LI GL +
Sbjct: 276 MVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKR 335
Query: 310 RLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYD 369
R+ EA E + P+ Y+ ++ R +A V +M Q G P TY
Sbjct: 336 RVVEAYGLVEGVE----NPDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYL 391
Query: 370 IILQPD---KGSKNPRSLLGF 387
++LQ +G K P L+ F
Sbjct: 392 MLLQGHLGRRGRKGPDPLVNF 412
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 106/203 (52%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ +A + F+ M G+ P + L+ LC+ S + A++LF +M+ G PD ++
Sbjct: 213 RTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHN 272
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
LL+G+ + ++ E+ R + + F + Y LI+ +A++Y +A Y M +K
Sbjct: 273 ALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKK 332
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
N+ P +++ LI GL ++++AL+ + G +P+T YNAV+ A C +++
Sbjct: 333 NIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEG 392
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
+ EM + P++ T+ I++
Sbjct: 393 RSLQLEMSETESFPDACTHTILI 415
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 91/183 (49%), Gaps = 17/183 (9%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM---RHRGLVPDL-- 225
V+EA E F ++EK G P V+ FN L+D LCKS +++A+ L KM R L L
Sbjct: 424 VREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSH 483
Query: 226 ---KSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
+S+ ++E S +L+ PD+V+Y +LIN +C+A D A+
Sbjct: 484 SGNRSFDTMVESGS----ILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKL 539
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
+ +Q K + P ++TLINGL R +EA + + + + F Y +++ W
Sbjct: 540 LNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLM---TW 594
Query: 343 SMR 345
S R
Sbjct: 595 SCR 597
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 103/232 (44%), Gaps = 14/232 (6%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ EA E EK G + ++ L+D L +++ +A EL+ M + + PD+ YT
Sbjct: 283 RMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYT 342
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL++G S+ + ++ M + PD Y +I A C +E EM E
Sbjct: 343 ILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSET 402
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P + LI + + + EA E + + + +G +P T+NA++ C S + +A
Sbjct: 403 ESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEA 462
Query: 350 YRVVDEMKQCGVG-----------PNSRTYDIILQPDKGSKNPRSLLGFPEN 390
++ +M+ VG +R++D +++ K R L F +
Sbjct: 463 RLLLHKME---VGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADT 511
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 100/199 (50%), Gaps = 3/199 (1%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
+T E+++ G+ + F L+ K EKA E F +M+ PD+ +Y ++L
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVM 172
Query: 236 SQQQNLLRVN-EVCREM-KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+++ + V EM KC C P++ T+GIL++ K + +A + +M + + P
Sbjct: 173 MREEVFFMLAFAVYNEMLKCNC-SPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISP 231
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ ++ LI+GL D+A + + + + +G P++ +NA++ +C RM +A+ ++
Sbjct: 232 NRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELL 291
Query: 354 DEMKQCGVGPNSRTYDIIL 372
++ G R Y ++
Sbjct: 292 RLFEKDGFVLGLRGYSSLI 310
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 109/251 (43%), Gaps = 1/251 (0%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKM 181
+F L++ L K + + +DM R + R T +A + F +M
Sbjct: 200 TFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEM 259
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
+ G P+ N L+D CK + +A EL G V L+ Y+ L++G + +
Sbjct: 260 QTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRY 319
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
+ E+ M + +PD++ Y ILI KA K ++A+ M K + P + ++ +
Sbjct: 320 TQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAV 379
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
I L L+E + P+ T+ ++ + C + + +A + E+++ G
Sbjct: 380 IKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGC 439
Query: 362 GPNSRTYDIIL 372
P+ T++ ++
Sbjct: 440 SPSVATFNALI 450
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 118/266 (44%), Gaps = 5/266 (1%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXX-KV 171
++ GF + +LI+ L + R++ + L +M ++ + K+
Sbjct: 295 EKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKI 354
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
++A++ M G+ P+ +N ++ LC +E+ + L +M PD ++TIL
Sbjct: 355 EDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTIL 414
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN- 290
+ + + E+ E++ P V T+ LI+ CK+ + EA H+M+
Sbjct: 415 ICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRP 474
Query: 291 ---MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
+ H + + + + +A F G +P+ +YN ++ +C + +D
Sbjct: 475 ASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDID 534
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILQ 373
A ++++ ++ G+ P+S TY+ ++
Sbjct: 535 GALKLLNVLQLKGLSPDSVTYNTLIN 560
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 84/181 (46%), Gaps = 1/181 (0%)
Query: 193 FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK 252
F ++D+L + + + ++++ G+ D + +L+ +++ + E MK
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 253 CECFEPDVVTYGILINAYCKAKKYDE-AVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRL 311
PDV TY +++ + + + A Y+EM + N P+ + F L++GL R
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 312 DEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDII 371
+A + ++ G +P TY ++ C DDA ++ EM+ G P+S ++ +
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNAL 274
Query: 372 L 372
L
Sbjct: 275 L 275
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 124/285 (43%), Gaps = 11/285 (3%)
Query: 86 SPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVE 145
+P+L+ + LN AG AL F W + F H+ E+ ++ G+ + FK + ++
Sbjct: 108 NPDLILQTLNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIIS 167
Query: 146 DMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEK-YGLKPEVSDFNKLVDVLCKSK 204
K + + T + K+ + FEKME YGLK + +V LC+
Sbjct: 168 --KYKGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKG 225
Query: 205 SVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYG 264
A+++ + + PD +L+ GW + L + EM FE Y
Sbjct: 226 HASIAEKMVKNTANE-IFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYN 284
Query: 265 ILINAYCK-AKKYD------EAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEF 317
++++ CK +K D E EM+ + + + F+ LIN L +R +EA+
Sbjct: 285 MMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTL 344
Query: 318 YEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVG 362
+ + G P+ TY ++ + + R+ + ++D+MK G G
Sbjct: 345 FGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYG 389
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 33/191 (17%)
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
+ME G+ FN L++ LCK + E+A LF +M G PD ++Y +L+ Q
Sbjct: 312 EMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAA 371
Query: 240 NLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
+ +E+ +MK YG L+N K+Y + F
Sbjct: 372 RIGEGDEMIDKMKS-------AGYGELLN----KKEY-------------------YGFL 401
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQC 359
++ G+ +RL+ A+ ++ KANG P TY+ ++G C + ++ A + E +
Sbjct: 402 KILCGI---ERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKK 458
Query: 360 GVGPNSRTYDI 370
G+ + + Y +
Sbjct: 459 GIAVSPKEYRV 469
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 141/336 (41%), Gaps = 46/336 (13%)
Query: 89 LVAEVLNKLSNAGVL--ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVED 146
L ++N S +G L A+ F K+ G K + +F+ LI+ GKI + + L++
Sbjct: 391 LFNAIINASSESGNLDQAMKIFE-KMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDM 449
Query: 147 MKQRKLLTRD--TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKL-------- 196
M + ++L + T K++EA KM+ YG+KP+V FN L
Sbjct: 450 MLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIG 509
Query: 197 ----------------------------VDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
V+ C+ +E+A F +M+ G+ P+L +
Sbjct: 510 STCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVF 569
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
L++G+ ++ V EV M+ +PDVVT+ L+NA+ Y +M E
Sbjct: 570 NSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLE 629
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
+ P H FS L G ++A + + + G P Y ++ +C + M
Sbjct: 630 GGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKK 689
Query: 349 AYRVVDEMKQCGV---GPNSRTYDIILQPDKGSKNP 381
A +V +M CG+ PN TY+ ++ +K P
Sbjct: 690 AMQVYKKM--CGIVGLSPNLTTYETLIWGFGEAKQP 723
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 104/203 (51%), Gaps = 1/203 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K++EA+ F +M++ G+ P + FN L+ ++ E+ D M G+ PD+ +++
Sbjct: 546 KMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFS 605
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ WS ++ R E+ +M +PD+ + IL Y +A + ++A ++M++
Sbjct: 606 TLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKF 665
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKF-KANGFAPETPTYNAVVGAYCWSMRMDD 348
+ P+ I++ +I+G S + +A++ Y+K G +P TY ++ + + +
Sbjct: 666 GVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWK 725
Query: 349 AYRVVDEMKQCGVGPNSRTYDII 371
A ++ +M+ V P +T +I
Sbjct: 726 AEELLKDMEGKNVVPTRKTMQLI 748
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 96/184 (52%), Gaps = 1/184 (0%)
Query: 189 EVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVC 248
+V KL++ L + ++A +F+ + G P L +YT L+ ++Q++ + +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 249 REMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSD 308
+++ +PD + + +INA ++ D+A+ + +M+E P+ F+TLI G G
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 309 KRLDEALEFYE-KFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
+L+E+ + + P T N +V A+C ++++A+ +V +M+ GV P+ T
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 368 YDII 371
++ +
Sbjct: 498 FNTL 501
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 84/166 (50%), Gaps = 1/166 (0%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
E + ME++G+KP+V F+ L++ +++ +E++ M G+ PD+ +++IL +G+
Sbjct: 587 EVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGY 646
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM-QEKNMMPS 294
++ + ++ +M+ P+VV Y +I+ +C A + +A+ Y +M + P+
Sbjct: 647 ARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPN 706
Query: 295 PHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
+ TLI G G K+ +A E + + P T + +
Sbjct: 707 LTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGW 752
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 79/151 (52%), Gaps = 1/151 (0%)
Query: 224 DLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFY 283
D++S T L+ G ++ + + + E +P ++TY L+ A + K + +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 284 HEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWS 343
++++ + P +F+ +IN LD+A++ +EK K +G P T+N ++ Y
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 344 MRMDDAYRVVDEM-KQCGVGPNSRTYDIILQ 373
+++++ R++D M + + PN RT +I++Q
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQ 468
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 99/255 (38%), Gaps = 40/255 (15%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+EA F + + G KP + + LV L + K L K+ GL PD + +
Sbjct: 336 QEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAI 395
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+ S+ NL + ++ +MK +P T+ LI Y K K +E+ M M
Sbjct: 396 INASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEM 455
Query: 292 M-PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYN---------------- 334
+ P+ + L+ + ++++EA K ++ G P+ T+N
Sbjct: 456 LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAE 515
Query: 335 --------------------AVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQP 374
+V YC +M++A R MK+ GV PN ++ ++
Sbjct: 516 DMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLI-- 573
Query: 375 DKGSKNPRSLLGFPE 389
KG N + G E
Sbjct: 574 -KGFLNINDMDGVGE 587
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 97/207 (46%), Gaps = 5/207 (2%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXX 162
AL FF+ K+ G + F++LI+ I + +V+ M++ + T
Sbjct: 550 ALRFFY-RMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLM 608
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
+K E + M + G+ P++ F+ L ++ EKA+++ ++MR G+
Sbjct: 609 NAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVR 668
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCEC--FEPDVVTYGILINAYCKAKKYDEAV 280
P++ YT ++ GW + + +V ++M C P++ TY LI + +AK+ +A
Sbjct: 669 PNVVIYTQIISGWCSAGEMKKAMQVYKKM-CGIVGLSPNLTTYETLIWGFGEAKQPWKAE 727
Query: 281 GFYHEMQEKNMMPSPHIFSTLINGLGS 307
+M+ KN++P+ + +G S
Sbjct: 728 ELLKDMEGKNVVPTRKTMQLIADGWKS 754
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 89/166 (53%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+EA+ FE+M G++P +N L+D S VE+A+ +F MR + PDL SYT +
Sbjct: 331 EEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTM 390
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
L + ++ + + +K + FEP++VTYG LI Y KA ++ + Y +M+ +
Sbjct: 391 LSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGI 450
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVV 337
+ I +T+++ G K AL +Y++ ++ G P+ N ++
Sbjct: 451 KANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLL 496
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 110/207 (53%), Gaps = 6/207 (2%)
Query: 170 KVKEAVETFEKM---EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLK 226
K KEA E FE + +K LKP+ ++ ++ + K+ + EKA+++F M +G+
Sbjct: 224 KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV 283
Query: 227 SYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
+Y L+ S + + V+++ +M+ +PDVV+Y +LI AY +A++ +EA+ + EM
Sbjct: 284 TYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEM 340
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRM 346
+ + P+ ++ L++ +++A ++ + + P+ +Y ++ AY + M
Sbjct: 341 LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDM 400
Query: 347 DDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+ A + +K G PN TY +++
Sbjct: 401 EGAEKFFKRIKVDGFEPNIVTYGTLIK 427
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 98/216 (45%), Gaps = 3/216 (1%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
++A + F M G+ +N L+ K V K ++D+M+ + PD+ SY +L
Sbjct: 264 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALL 320
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++ + + + V EM P Y IL++A+ + ++A + M+ +
Sbjct: 321 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 380
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P ++T+++ + ++ A +F+++ K +GF P TY ++ Y + ++
Sbjct: 381 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMME 440
Query: 352 VVDEMKQCGVGPNSRTYDIILQPDKGSKNPRSLLGF 387
V ++M+ G+ N I+ KN S LG+
Sbjct: 441 VYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGW 476
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 89/216 (41%), Gaps = 35/216 (16%)
Query: 192 DFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREM 251
DF L+ K + A+ + + G P++ SYT L+E + + + R M
Sbjct: 141 DFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRM 200
Query: 252 KCECFEPDVVTYGILINAYCKAKKYDEA------------------VGFYHEM-----QE 288
+ EP +TY I++ + + K+ EA YH M +
Sbjct: 201 QSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKA 260
Query: 289 KNMMPSPHIFSTLI-----------NGLGS-DKRLDEALEFYEKFKANGFAPETPTYNAV 336
N + +FS+++ N L S + E + Y++ + + P+ +Y +
Sbjct: 261 GNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALL 320
Query: 337 VGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+ AY + R ++A V +EM GV P + Y+I+L
Sbjct: 321 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL 356
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 89/166 (53%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+EA+ FE+M G++P +N L+D S VE+A+ +F MR + PDL SYT +
Sbjct: 338 EEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTM 397
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
L + ++ + + +K + FEP++VTYG LI Y KA ++ + Y +M+ +
Sbjct: 398 LSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGI 457
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVV 337
+ I +T+++ G K AL +Y++ ++ G P+ N ++
Sbjct: 458 KANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLL 503
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 110/207 (53%), Gaps = 6/207 (2%)
Query: 170 KVKEAVETFEKM---EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLK 226
K KEA E FE + +K LKP+ ++ ++ + K+ + EKA+++F M +G+
Sbjct: 231 KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV 290
Query: 227 SYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
+Y L+ S + + V+++ +M+ +PDVV+Y +LI AY +A++ +EA+ + EM
Sbjct: 291 TYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEM 347
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRM 346
+ + P+ ++ L++ +++A ++ + + P+ +Y ++ AY + M
Sbjct: 348 LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDM 407
Query: 347 DDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+ A + +K G PN TY +++
Sbjct: 408 EGAEKFFKRIKVDGFEPNIVTYGTLIK 434
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 98/216 (45%), Gaps = 3/216 (1%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
++A + F M G+ +N L+ K V K ++D+M+ + PD+ SY +L
Sbjct: 271 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALL 327
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++ + + + V EM P Y IL++A+ + ++A + M+ +
Sbjct: 328 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 387
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P ++T+++ + ++ A +F+++ K +GF P TY ++ Y + ++
Sbjct: 388 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMME 447
Query: 352 VVDEMKQCGVGPNSRTYDIILQPDKGSKNPRSLLGF 387
V ++M+ G+ N I+ KN S LG+
Sbjct: 448 VYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGW 483
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 89/216 (41%), Gaps = 35/216 (16%)
Query: 192 DFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREM 251
DF L+ K + A+ + + G P++ SYT L+E + + + R M
Sbjct: 148 DFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRM 207
Query: 252 KCECFEPDVVTYGILINAYCKAKKYDEA------------------VGFYHEM-----QE 288
+ EP +TY I++ + + K+ EA YH M +
Sbjct: 208 QSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKA 267
Query: 289 KNMMPSPHIFSTLI-----------NGLGS-DKRLDEALEFYEKFKANGFAPETPTYNAV 336
N + +FS+++ N L S + E + Y++ + + P+ +Y +
Sbjct: 268 GNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALL 327
Query: 337 VGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+ AY + R ++A V +EM GV P + Y+I+L
Sbjct: 328 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL 363
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ +A F M+ GLK +V +N L+ K+ + K EL D+MR G+ PD+ +Y I
Sbjct: 459 ISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNI 518
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ + + NE+ E+ F P + + +I + K + EA + M +
Sbjct: 519 LIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLR 578
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
M P S L++G +R+++A+ + K G P+ YN ++ YC ++ A
Sbjct: 579 MKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKAC 638
Query: 351 RVVDEMKQCGVGPNSRTYDIILQPDKGSK 379
++ M Q G+ PN T+ ++ +G +
Sbjct: 639 ELIGLMVQRGMLPNESTHHALVLGLEGKR 667
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 94/204 (46%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ +A + F + K G P ++ L+ + S+ A+ +F M+ GL D+ +Y
Sbjct: 423 RTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYN 482
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G+ + L +V E+ EM+ PDV TY ILI++ DEA E+ +
Sbjct: 483 NLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRR 542
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+PS F+ +I G EA + P+ T +A++ YC + RM+ A
Sbjct: 543 GFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKA 602
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
+ +++ G+ P+ Y+ ++
Sbjct: 603 IVLFNKLLDAGLKPDVVLYNTLIH 626
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 95/204 (46%), Gaps = 3/204 (1%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+KEA K++ +G+ + + ++D CK E+A +L R R P++ Y+
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSS 378
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L ++LR + + +E+ PD V Y +I+ YC + D+A ++ + +
Sbjct: 379 FLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG 438
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
PS + LI + +A + K G + TYN ++ Y + +++ +
Sbjct: 439 NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVF 498
Query: 351 RVVDEMKQCGVGPNSRTYDIILQP 374
++DEM+ G+ P+ TY+I++
Sbjct: 499 ELIDEMRSAGISPDVATYNILIHS 522
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 78/168 (46%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
A F+++ + GL P+ + ++D C +KA + F + G P L + TIL+
Sbjct: 391 RASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILI 450
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
S+ ++ V R MK E + DVVTY L++ Y K + ++ EM+ +
Sbjct: 451 GACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGIS 510
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
P ++ LI+ + +DEA E + GF P T + V+G +
Sbjct: 511 PDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGF 558
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 97/203 (47%), Gaps = 1/203 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV + E + + + L+P + ++ + +C + + +A +F ++ GL+PD YT
Sbjct: 353 KVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYT 412
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+++G+ + + + P + T ILI A + +A + M+ +
Sbjct: 413 TMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTE 472
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ ++ L++G G +L++ E ++ ++ G +P+ TYN ++ + +D+A
Sbjct: 473 GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEA 532
Query: 350 YRVVDEMKQCGVGPNSRTY-DII 371
++ E+ + G P++ + D+I
Sbjct: 533 NEIISELIRRGFVPSTLAFTDVI 555
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 87/199 (43%), Gaps = 3/199 (1%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A E E M G + + + C +K EL M+H G+ PD+ ++T+ ++
Sbjct: 255 AREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFID 314
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ L V ++K D V+ +I+ +CK K +EA+ H + + P
Sbjct: 315 KLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRP 371
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ ++S+ ++ + S + A +++ G P+ Y ++ YC R D A++
Sbjct: 372 NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYF 431
Query: 354 DEMKQCGVGPNSRTYDIIL 372
+ + G P+ T I++
Sbjct: 432 GALLKSGNPPSLTTSTILI 450
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFK---VIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXK 170
++GF ST +F +I K F+ ++W + D++ + + T +
Sbjct: 541 RRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVV--TCSALLHGYCKAQR 598
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+++A+ F K+ GLKP+V +N L+ C +EKA EL M RG++P+ ++
Sbjct: 599 MEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHA 658
Query: 231 LLEG 234
L+ G
Sbjct: 659 LVLG 662
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ +A F M+ GLK +V +N L+ K+ + K EL D+MR G+ PD+ +Y I
Sbjct: 459 ISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNI 518
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ + + NE+ E+ F P + + +I + K + EA + M +
Sbjct: 519 LIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLR 578
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
M P S L++G +R+++A+ + K G P+ YN ++ YC ++ A
Sbjct: 579 MKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKAC 638
Query: 351 RVVDEMKQCGVGPNSRTYDIILQPDKGSK 379
++ M Q G+ PN T+ ++ +G +
Sbjct: 639 ELIGLMVQRGMLPNESTHHALVLGLEGKR 667
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 94/204 (46%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ +A + F + K G P ++ L+ + S+ A+ +F M+ GL D+ +Y
Sbjct: 423 RTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYN 482
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G+ + L +V E+ EM+ PDV TY ILI++ DEA E+ +
Sbjct: 483 NLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRR 542
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+PS F+ +I G EA + P+ T +A++ YC + RM+ A
Sbjct: 543 GFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKA 602
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
+ +++ G+ P+ Y+ ++
Sbjct: 603 IVLFNKLLDAGLKPDVVLYNTLIH 626
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 95/204 (46%), Gaps = 3/204 (1%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+KEA K++ +G+ + + ++D CK E+A +L R R P++ Y+
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSS 378
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L ++LR + + +E+ PD V Y +I+ YC + D+A ++ + +
Sbjct: 379 FLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG 438
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
PS + LI + +A + K G + TYN ++ Y + +++ +
Sbjct: 439 NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVF 498
Query: 351 RVVDEMKQCGVGPNSRTYDIILQP 374
++DEM+ G+ P+ TY+I++
Sbjct: 499 ELIDEMRSAGISPDVATYNILIHS 522
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 78/168 (46%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
A F+++ + GL P+ + ++D C +KA + F + G P L + TIL+
Sbjct: 391 RASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILI 450
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
S+ ++ V R MK E + DVVTY L++ Y K + ++ EM+ +
Sbjct: 451 GACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGIS 510
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
P ++ LI+ + +DEA E + GF P T + V+G +
Sbjct: 511 PDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGF 558
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 97/203 (47%), Gaps = 1/203 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV + E + + + L+P + ++ + +C + + +A +F ++ GL+PD YT
Sbjct: 353 KVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYT 412
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+++G+ + + + P + T ILI A + +A + M+ +
Sbjct: 413 TMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTE 472
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ ++ L++G G +L++ E ++ ++ G +P+ TYN ++ + +D+A
Sbjct: 473 GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEA 532
Query: 350 YRVVDEMKQCGVGPNSRTY-DII 371
++ E+ + G P++ + D+I
Sbjct: 533 NEIISELIRRGFVPSTLAFTDVI 555
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 87/199 (43%), Gaps = 3/199 (1%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A E E M G + + + C +K EL M+H G+ PD+ ++T+ ++
Sbjct: 255 AREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFID 314
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ L V ++K D V+ +I+ +CK K +EA+ H + + P
Sbjct: 315 KLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRP 371
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ ++S+ ++ + S + A +++ G P+ Y ++ YC R D A++
Sbjct: 372 NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYF 431
Query: 354 DEMKQCGVGPNSRTYDIIL 372
+ + G P+ T I++
Sbjct: 432 GALLKSGNPPSLTTSTILI 450
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFK---VIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXK 170
++GF ST +F +I K F+ ++W + D++ + + T +
Sbjct: 541 RRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVV--TCSALLHGYCKAQR 598
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+++A+ F K+ GLKP+V +N L+ C +EKA EL M RG++P+ ++
Sbjct: 599 MEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHA 658
Query: 231 LLEG 234
L+ G
Sbjct: 659 LVLG 662
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 177 TFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWS 236
TFE+M +YG P FN L+DV K+K +K ELF + G+V D+ SY ++ +
Sbjct: 686 TFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNTIIAAYG 744
Query: 237 QQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPH 296
+ ++ ++ + M+ + F + Y L++AY K K+ ++ M++ P +
Sbjct: 745 KNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHY 804
Query: 297 IFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM 356
++ +IN G +DE + ++ K +G P+ +YN ++ AY +++A +V EM
Sbjct: 805 TYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEM 864
Query: 357 KQCGVGPNSRTY 368
+ + P+ TY
Sbjct: 865 RGRNIIPDKVTY 876
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 98/205 (47%), Gaps = 4/205 (1%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V+EA F M K+G+ E S ++ ++ + + + +KA+E+ D M+ + L+++ +
Sbjct: 261 VEEAEFAFSHMRKFGIVCE-SAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLV 319
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+L +SQQ + + M+ F P+++ Y LI Y K K + A G +H +
Sbjct: 320 MLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIG 379
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ P + ++I G G +EA +Y++ K G+ P + ++ D A
Sbjct: 380 LEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAI 439
Query: 351 RVVDEMKQCGVGPN-SRTYDIILQP 374
+ +++M G+G S IILQ
Sbjct: 440 KTIEDM--TGIGCQYSSILGIILQA 462
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 3/201 (1%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAV 175
GF +T +F+ L++ GK + FK + L K+ ++ +
Sbjct: 694 GFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMS 753
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
+ M+ G + +N L+D K K +EK + + +M+ PD +Y I++ +
Sbjct: 754 SAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIY 813
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSP 295
+Q + V +V +E+K PD+ +Y LI AY +EAVG EM+ +N++P
Sbjct: 814 GEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDK 873
Query: 296 HIFSTLINGLGSDKRLDEALE 316
++ L+ L +R DE LE
Sbjct: 874 VTYTNLVTAL---RRNDEFLE 891
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 106/239 (44%), Gaps = 35/239 (14%)
Query: 171 VKEAVETFEKM-EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++EA E M E+ + P+V F ++ + K +K Q L+ ++R G+ + + Y
Sbjct: 609 LEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYN 668
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAK--------------- 274
++ ++ L ++ EM F P+ VT+ +L++ Y KAK
Sbjct: 669 CVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRH 728
Query: 275 ------KYDEAVGFYHE-------------MQEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
Y+ + Y + MQ S ++TL++ G DK++++
Sbjct: 729 GVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFR 788
Query: 316 EFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQP 374
++ K + P+ TYN ++ Y +D+ V+ E+K+ G+GP+ +Y+ +++
Sbjct: 789 SILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKA 847
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 1/165 (0%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFEKM 181
++ ++I ++R + +++ MKQ ++ L + K++ A M
Sbjct: 281 AYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSM 340
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
E G P + +N L+ K +E AQ LF ++ + GL PD SY ++EGW + N
Sbjct: 341 EAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNY 400
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
+E+K ++P+ LIN K D A+ +M
Sbjct: 401 EEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDM 445
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 104/196 (53%), Gaps = 1/196 (0%)
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
++ME G VS ++ L++ C++ + KA LF++MR +G+V ++ +YT L++ + ++
Sbjct: 315 KEMEPRGFCDVVS-YSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLRE 373
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
N ++ +M PD + Y +++ CK+ D+A G +++M E + P +
Sbjct: 374 GNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISY 433
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
++LI+GL R+ EA++ +E K P+ T+ ++G ++ AY+V D+M
Sbjct: 434 NSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMD 493
Query: 359 CGVGPNSRTYDIILQP 374
G + D +++
Sbjct: 494 KGFTLDRDVSDTLIKA 509
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 154/371 (41%), Gaps = 58/371 (15%)
Query: 51 TLIPHT--PHADKICKILSKSPNSTIDAALADL-SVEVSPELVA-----EVLNKLSNAGV 102
+LIP T +CK+ IDA L+D+ ++ P++ A ++L + + G
Sbjct: 76 SLIPFTYSRFISGLCKV---KKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGF 132
Query: 103 LALSFFHWAEKQKGFKHSTESFHALIEAL---GKIRQFKVIWNLVEDMKQRKLLTRDTXX 159
+FF Q+G + S+ LI L GK+ IWN + R ++ D
Sbjct: 133 AVQTFFCMV--QRGREPDVVSYTILINGLFRAGKVTDAVEIWNAM----IRSGVSPDNKA 186
Query: 160 XXXXXXXX--XXKVKEAVETF-EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM 216
KV A E E+++ +K +N L+ CK+ +EKA+ L M
Sbjct: 187 CAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYM 246
Query: 217 RHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREM------------------------- 251
G PDL +Y +LL + L R V EM
Sbjct: 247 SKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHP 306
Query: 252 -KCECF-----EP----DVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
KC F EP DVV+Y LI +C+A +A + EM++K M+ + +++L
Sbjct: 307 DKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSL 366
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
I + A + ++ G +P+ Y ++ C S +D AY V ++M + +
Sbjct: 367 IKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEI 426
Query: 362 GPNSRTYDIIL 372
P++ +Y+ ++
Sbjct: 427 TPDAISYNSLI 437
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 1/176 (0%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
++A FE+M + G+ V + L+ + + A++L D+M GL PD YT +
Sbjct: 342 RKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTI 401
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
L+ + N+ + V +M PD ++Y LI+ C++ + EA+ + +M+ K
Sbjct: 402 LDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKEC 461
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
P F +I GL K+L A + +++ GF + + ++ A C SM D
Sbjct: 462 CPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC-SMSAD 516
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 113/284 (39%), Gaps = 35/284 (12%)
Query: 109 HWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXX 168
+W K GF ++ I L K+++F +I L+ DM
Sbjct: 67 YWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDM--------------------- 105
Query: 169 XKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
E G P++ FN +D+LC+ V A + F M RG PD+ SY
Sbjct: 106 -------------ETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSY 152
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFY-HEMQ 287
TIL+ G + + E+ M PD L+ C A+K D A E++
Sbjct: 153 TILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIK 212
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
+ S +++ LI+G R+++A G P+ TYN ++ Y + +
Sbjct: 213 SARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLK 272
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILQPDKGSKNPRSLLGFPENE 391
A V+ EM + G+ ++ +Y+ +L+ +P F E
Sbjct: 273 RAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKE 316
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 72/168 (42%)
Query: 200 LCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPD 259
L KS ++ A ++FD+MRH Y + ++ + +MK F
Sbjct: 19 LVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLI 78
Query: 260 VVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYE 319
TY I+ CK KK+D +M+ +P F+ ++ L + ++ A++ +
Sbjct: 79 PFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFF 138
Query: 320 KFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
G P+ +Y ++ + ++ DA + + M + GV P+++
Sbjct: 139 CMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKA 186
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 143/290 (49%), Gaps = 9/290 (3%)
Query: 106 SFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXX 164
+FF+W + + F T ++ +++L RQF++I + +M + + L T
Sbjct: 171 TFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITC 230
Query: 165 XXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPD 224
+A+E FE+M K GL P+ ++ ++DV KS VE+ L+++ G PD
Sbjct: 231 AKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPD 290
Query: 225 LKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYH 284
++++L + + + + + V +EMK +P+VV Y L+ A +A K A ++
Sbjct: 291 AIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFN 350
Query: 285 EMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSM 344
EM E + P+ + L+ G + +AL+ +E+ KA + + YN ++ C +
Sbjct: 351 EMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLN-MCADI 409
Query: 345 RM-DDAYRVVDEMK---QCGVGPNSRTYDIILQP-DKGSKNPRSLLGFPE 389
+ ++A R+ ++MK QC P++ +Y +L G K +++ F E
Sbjct: 410 GLEEEAERLFNDMKESVQC--RPDNFSYTAMLNIYGSGGKAEKAMELFEE 457
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 93/197 (47%), Gaps = 1/197 (0%)
Query: 177 TFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWS 236
++M+ +KP V +N L++ + ++ A+ LF++M GL P+ K+ T L++ +
Sbjct: 313 VLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYG 372
Query: 237 QQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK-NMMPSP 295
+ + ++ EMK + + D + Y L+N +EA +++M+E P
Sbjct: 373 KARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDN 432
Query: 296 HIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDE 355
++ ++N GS + ++A+E +E+ G +V + R+DD V D
Sbjct: 433 FSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDL 492
Query: 356 MKQCGVGPNSRTYDIIL 372
+ GV P+ R +L
Sbjct: 493 SIKRGVKPDDRLCGCLL 509
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 81/176 (46%), Gaps = 1/176 (0%)
Query: 199 VLCKSKSVEKAQELFDKMRHRGLVP-DLKSYTILLEGWSQQQNLLRVNEVCREMKCECFE 257
VL + +K F+ ++ + L P + Y + ++ + + E+ EM + E
Sbjct: 159 VLNSLREWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVE 218
Query: 258 PDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEF 317
D +TY +I + Y++A+ ++ M + +MP +S +++ +++E L
Sbjct: 219 LDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSL 278
Query: 318 YEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
YE+ A G+ P+ ++ + + + D V+ EMK V PN Y+ +L+
Sbjct: 279 YERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLE 334
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 79/181 (43%), Gaps = 9/181 (4%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE---- 233
F +M + GL P LV + K++ A +L+++M+ + D Y LL
Sbjct: 349 FNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCAD 408
Query: 234 -GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G ++ L N++ ++C PD +Y ++N Y K ++A+ + EM + +
Sbjct: 409 IGLEEEAERL-FNDMKESVQCR---PDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQ 464
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
+ + L+ LG KR+D+ + ++ G P+ ++ +DA +V
Sbjct: 465 VNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKV 524
Query: 353 V 353
+
Sbjct: 525 M 525
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 129/292 (44%), Gaps = 5/292 (1%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD---TXXX 160
ALS+F + K + T +F+ +I L K+ Q +L M++++ R T
Sbjct: 135 ALSYFELMKGAK-VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 161 XXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRG 220
+++ FE M GLKP + +N L+ A + ++ G
Sbjct: 194 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 253
Query: 221 LVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAV 280
++PD+ SYT LL + + + + EV M+ E +P+VVTY LI+AY EAV
Sbjct: 254 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV 313
Query: 281 GFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
+ +M++ + P+ TL+ K+ ++ G T YN+ +G+Y
Sbjct: 314 EIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSY 373
Query: 341 CWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQPD-KGSKNPRSLLGFPENE 391
+ ++ A + M++ V +S T+ I++ + SK P ++ E E
Sbjct: 374 INAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 425
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 117/284 (41%), Gaps = 45/284 (15%)
Query: 109 HWAEKQKGF---------KHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXX 159
+W ++ +G K E++ ALI A G+ Q++ NL++DM
Sbjct: 25 NWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML----------- 73
Query: 160 XXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHR 219
+ + P S +N L++ S + +A E+ KM
Sbjct: 74 -----------------------RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDN 110
Query: 220 GLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEA 279
G+ PDL ++ I+L + + + MK PD T+ I+I K + +A
Sbjct: 111 GVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQA 170
Query: 280 VGFYHEMQEKNMMPSPHI--FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVV 337
+ ++ M+EK P + F+++++ ++ +E A G P +YNA++
Sbjct: 171 LDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM 230
Query: 338 GAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQPDKGSKNP 381
GAY A V+ ++KQ G+ P+ +Y +L S+ P
Sbjct: 231 GAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP 274
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 124/271 (45%), Gaps = 6/271 (2%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQ---FKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXX 169
KQ G S+ L+ + G+ RQ K ++ ++ K+R+ T
Sbjct: 250 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMR--KERRKPNVVTYNALIDAYGSNG 307
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ EAVE F +ME+ G+KP V L+ +SK + + RG+ + +Y
Sbjct: 308 FLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYN 367
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+ + L + + + M+ + + D VT+ ILI+ C+ KY EA+ + EM++
Sbjct: 368 SAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDL 427
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++ + ++S+++ ++ EA + + K G P+ Y +++ AY S + A
Sbjct: 428 SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKA 487
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQP-DKGSK 379
+ EM+ G+ P+S +++ +KG +
Sbjct: 488 CELFLEMEANGIEPDSIACSALMRAFNKGGQ 518
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 115/266 (43%), Gaps = 1/266 (0%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKV-KE 173
+G K + S++AL+ A +++ D+KQ ++ + +
Sbjct: 217 EGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGK 276
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A E F M K KP V +N L+D + + +A E+F +M G+ P++ S LL
Sbjct: 277 AKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLA 336
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
S+ + + V+ V + + Y I +Y A + ++A+ Y M++K +
Sbjct: 337 ACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKA 396
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
F+ LI+G + EA+ + ++ + Y++V+ AY ++ +A +
Sbjct: 397 DSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIF 456
Query: 354 DEMKQCGVGPNSRTYDIILQPDKGSK 379
++MK G P+ Y +L S+
Sbjct: 457 NQMKMAGCEPDVIAYTSMLHAYNASE 482
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
Query: 255 CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEA 314
C D+ Y ++I + + D+A G + EMQ+ + P + LIN G + A
Sbjct: 8 CARNDI--YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWA 65
Query: 315 LEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQP 374
+ + AP TYN ++ A S +A V +M GVGP+ T++I+L
Sbjct: 66 MNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSA 125
Query: 375 DKGSKNPRSLLGFPE 389
K + L + E
Sbjct: 126 YKSGRQYSKALSYFE 140
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/264 (18%), Positives = 115/264 (43%), Gaps = 1/264 (0%)
Query: 111 AEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXX 169
A + +G +T ++++ I + + + L + M+++K+ T
Sbjct: 353 AAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMS 412
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K EA+ ++ME + ++ ++ K V +A+ +F++M+ G PD+ +YT
Sbjct: 413 KYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYT 472
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L ++ + + E+ EM+ EPD + L+ A+ K + M+EK
Sbjct: 473 SMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREK 532
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ + +F + + + + A++ + + N ++ + S +++
Sbjct: 533 EIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAM 592
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
++ ++ GVG N +TY I+L+
Sbjct: 593 MKLFYKIIASGVGINLKTYAILLE 616
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 129/292 (44%), Gaps = 5/292 (1%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD---TXXX 160
ALS+F + K + T +F+ +I L K+ Q +L M++++ R T
Sbjct: 267 ALSYFELMKGAK-VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 325
Query: 161 XXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRG 220
+++ FE M GLKP + +N L+ A + ++ G
Sbjct: 326 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 385
Query: 221 LVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAV 280
++PD+ SYT LL + + + + EV M+ E +P+VVTY LI+AY EAV
Sbjct: 386 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV 445
Query: 281 GFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
+ +M++ + P+ TL+ K+ ++ G T YN+ +G+Y
Sbjct: 446 EIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSY 505
Query: 341 CWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQPD-KGSKNPRSLLGFPENE 391
+ ++ A + M++ V +S T+ I++ + SK P ++ E E
Sbjct: 506 INAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 557
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 117/284 (41%), Gaps = 45/284 (15%)
Query: 109 HWAEKQKGF---------KHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXX 159
+W ++ +G K E++ ALI A G+ Q++ NL++DM
Sbjct: 157 NWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML----------- 205
Query: 160 XXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHR 219
+ + P S +N L++ S + +A E+ KM
Sbjct: 206 -----------------------RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDN 242
Query: 220 GLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEA 279
G+ PDL ++ I+L + + + MK PD T+ I+I K + +A
Sbjct: 243 GVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQA 302
Query: 280 VGFYHEMQEKNMMPSPHI--FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVV 337
+ ++ M+EK P + F+++++ ++ +E A G P +YNA++
Sbjct: 303 LDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM 362
Query: 338 GAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQPDKGSKNP 381
GAY A V+ ++KQ G+ P+ +Y +L S+ P
Sbjct: 363 GAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP 406
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 124/271 (45%), Gaps = 6/271 (2%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQ---FKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXX 169
KQ G S+ L+ + G+ RQ K ++ ++ K+R+ T
Sbjct: 382 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMR--KERRKPNVVTYNALIDAYGSNG 439
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ EAVE F +ME+ G+KP V L+ +SK + + RG+ + +Y
Sbjct: 440 FLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYN 499
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+ + L + + + M+ + + D VT+ ILI+ C+ KY EA+ + EM++
Sbjct: 500 SAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDL 559
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++ + ++S+++ ++ EA + + K G P+ Y +++ AY S + A
Sbjct: 560 SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKA 619
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQP-DKGSK 379
+ EM+ G+ P+S +++ +KG +
Sbjct: 620 CELFLEMEANGIEPDSIACSALMRAFNKGGQ 650
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 5/167 (2%)
Query: 226 KSYTILLEGWSQQQNLLRVNEVCREMKCE---CFEPDVVTYGILINAYCKAKKYDEAVGF 282
K++ +L+ S++ + V + MK + C D+ Y ++I + + D+A G
Sbjct: 108 KNFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDI--YNMMIRLHARHNWVDQARGL 165
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
+ EMQ+ + P + LIN G + A+ + AP TYN ++ A
Sbjct: 166 FFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGS 225
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRTYDIILQPDKGSKNPRSLLGFPE 389
S +A V +M GVGP+ T++I+L K + L + E
Sbjct: 226 SGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFE 272
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/264 (18%), Positives = 115/264 (43%), Gaps = 1/264 (0%)
Query: 111 AEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXX 169
A + +G +T ++++ I + + + L + M+++K+ T
Sbjct: 485 AAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMS 544
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K EA+ ++ME + ++ ++ K V +A+ +F++M+ G PD+ +YT
Sbjct: 545 KYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYT 604
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L ++ + + E+ EM+ EPD + L+ A+ K + M+EK
Sbjct: 605 SMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREK 664
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ + +F + + + + A++ + + N ++ + S +++
Sbjct: 665 EIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAM 724
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
++ ++ GVG N +TY I+L+
Sbjct: 725 MKLFYKIIASGVGINLKTYAILLE 748
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 119/285 (41%), Gaps = 71/285 (24%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ EA+E M K+G++P+ +N L + A E+ M +GL PD+ +YTI
Sbjct: 273 IAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTI 332
Query: 231 LLEGWSQQQNL------------------------LRVNEVCR------------EMKCE 254
LL G Q N+ + ++ +C+ +MK +
Sbjct: 333 LLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKAD 392
Query: 255 CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPH------------------ 296
PD+V Y I+I+ CK K+D A+ Y EM +K ++P+
Sbjct: 393 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 452
Query: 297 -----------------IFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
+++ +I+G ++EALE ++ G P T+N+++
Sbjct: 453 RSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYG 512
Query: 340 YCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQPDKGSKNPRSL 384
YC + + +A +++D +K G+ P+ +Y ++ N +S+
Sbjct: 513 YCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 105/206 (50%), Gaps = 4/206 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ EA+ F +M+ GL P++ ++ ++ LCK + A L+D+M + ++P+ +++
Sbjct: 378 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 437
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
LL G Q+ LL + + D+V Y I+I+ Y K+ +EA+ + + E
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 497
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY--CWSMRMD 347
+ PS F++LI G + + EA + + K G AP +Y ++ AY C + +
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILQ 373
D R EMK G+ P + TY +I +
Sbjct: 558 DELR--REMKAEGIPPTNVTYSVIFK 581
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 93/183 (50%), Gaps = 12/183 (6%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
++EA+E F+ + + G+ P V+ FN L+ CK++++ +A+++ D ++ GL P + SYT
Sbjct: 484 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 543
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHE----- 285
L++ ++ N ++E+ REMK E P VTY ++ C+ K++ E
Sbjct: 544 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 603
Query: 286 -------MQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVG 338
M+ + + P ++T+I L K L A F E K+ + TYN ++
Sbjct: 604 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 663
Query: 339 AYC 341
+ C
Sbjct: 664 SLC 666
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 121/296 (40%), Gaps = 42/296 (14%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVK 172
K + ST+S++++ L R+ +W++ +++K + T K++
Sbjct: 151 KDQNLNVSTQSYNSV---LYHFRETDKMWDVYKEIKDKN---EHTYSTVVDGLCRQQKLE 204
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+AV E + P V FN ++ CK V+ A+ F + GLVP + S+ IL+
Sbjct: 205 DAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILI 264
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G ++ E+ +M EPD VTY IL + A +M +K +
Sbjct: 265 NGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLS 324
Query: 293 PSPHIF------------------------------------STLINGLGSDKRLDEALE 316
P + S +++GL R+DEAL
Sbjct: 325 PDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALS 384
Query: 317 FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+ + KA+G +P+ Y+ V+ C + D A + DEM + PNSRT+ +L
Sbjct: 385 LFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 440
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 131/290 (45%), Gaps = 14/290 (4%)
Query: 90 VAEVLNKL-SNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMK 148
V E++++L S + L++ FF F+HS+ S + L R+FK + ++E +
Sbjct: 52 VEEIMDELMSESSDLSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLL 111
Query: 149 QRKLLTRD------TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCK 202
Q + R V +++ +KM+ L +N VL
Sbjct: 112 QEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNS---VLYH 168
Query: 203 SKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVT 262
+ +K +++ +++ + + +Y+ +++G +QQ L R + + P VV+
Sbjct: 169 FRETDKMWDVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVS 224
Query: 263 YGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFK 322
+ +++ YCK D A F+ + + ++PS + + LINGL + EALE
Sbjct: 225 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 284
Query: 323 ANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+G P++ TYN + + + A+ V+ +M G+ P+ TY I+L
Sbjct: 285 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILL 334
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 121/282 (42%), Gaps = 14/282 (4%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXX 162
ALS F+ K G ++ +I L K+ +F + L ++M +++L T
Sbjct: 382 ALSLFN-QMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 440
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
+ EA + + G ++ +N ++D KS +E+A ELF + G+
Sbjct: 441 LGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGIT 500
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
P + ++ L+ G+ + QN+ ++ +K P VV+Y L++AY
Sbjct: 501 PSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDEL 560
Query: 283 YHEMQEKNMMPSPHIFSTLINGLG------------SDKRLDEALEFYEKFKANGFAPET 330
EM+ + + P+ +S + GL ++ ++ + ++ G P+
Sbjct: 561 RREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQ 620
Query: 331 PTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
TYN ++ C + A+ ++ MK + +S TY+I++
Sbjct: 621 ITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILI 662
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 87/218 (39%), Gaps = 47/218 (21%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ EA + + ++ YGL P V + L+D + + EL +M+ G+ P +Y++
Sbjct: 519 IAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSV 578
Query: 231 ----LLEGWSQQQ--NLLR--VNEVC----REMKCECFEPDVVTYG-------------- 264
L GW + ++LR + E C R+M+ E PD +TY
Sbjct: 579 IFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSG 638
Query: 265 ---------------------ILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLIN 303
ILI++ C +A F + +QE+N+ S ++TLI
Sbjct: 639 AFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIK 698
Query: 304 GLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
+ A++ + + GF Y+AV+ C
Sbjct: 699 AHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLC 736
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 119/285 (41%), Gaps = 71/285 (24%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ EA+E M K+G++P+ +N L + A E+ M +GL PD+ +YTI
Sbjct: 273 IAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTI 332
Query: 231 LLEGWSQQQNL------------------------LRVNEVCR------------EMKCE 254
LL G Q N+ + ++ +C+ +MK +
Sbjct: 333 LLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKAD 392
Query: 255 CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPH------------------ 296
PD+V Y I+I+ CK K+D A+ Y EM +K ++P+
Sbjct: 393 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 452
Query: 297 -----------------IFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
+++ +I+G ++EALE ++ G P T+N+++
Sbjct: 453 RSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYG 512
Query: 340 YCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQPDKGSKNPRSL 384
YC + + +A +++D +K G+ P+ +Y ++ N +S+
Sbjct: 513 YCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 105/206 (50%), Gaps = 4/206 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ EA+ F +M+ GL P++ ++ ++ LCK + A L+D+M + ++P+ +++
Sbjct: 378 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 437
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
LL G Q+ LL + + D+V Y I+I+ Y K+ +EA+ + + E
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 497
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY--CWSMRMD 347
+ PS F++LI G + + EA + + K G AP +Y ++ AY C + +
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILQ 373
D R EMK G+ P + TY +I +
Sbjct: 558 DELR--REMKAEGIPPTNVTYSVIFK 581
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 93/183 (50%), Gaps = 12/183 (6%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
++EA+E F+ + + G+ P V+ FN L+ CK++++ +A+++ D ++ GL P + SYT
Sbjct: 484 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 543
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHE----- 285
L++ ++ N ++E+ REMK E P VTY ++ C+ K++ E
Sbjct: 544 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 603
Query: 286 -------MQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVG 338
M+ + + P ++T+I L K L A F E K+ + TYN ++
Sbjct: 604 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 663
Query: 339 AYC 341
+ C
Sbjct: 664 SLC 666
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 121/296 (40%), Gaps = 42/296 (14%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVK 172
K + ST+S++++ L R+ +W++ +++K + T K++
Sbjct: 151 KDQNLNVSTQSYNSV---LYHFRETDKMWDVYKEIKDK---NEHTYSTVVDGLCRQQKLE 204
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+AV E + P V FN ++ CK V+ A+ F + GLVP + S+ IL+
Sbjct: 205 DAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILI 264
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G ++ E+ +M EPD VTY IL + A +M +K +
Sbjct: 265 NGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLS 324
Query: 293 PSPHIF------------------------------------STLINGLGSDKRLDEALE 316
P + S +++GL R+DEAL
Sbjct: 325 PDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALS 384
Query: 317 FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+ + KA+G +P+ Y+ V+ C + D A + DEM + PNSRT+ +L
Sbjct: 385 LFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 440
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 131/290 (45%), Gaps = 14/290 (4%)
Query: 90 VAEVLNKL-SNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMK 148
V E++++L S + L++ FF F+HS+ S + L R+FK + ++E +
Sbjct: 52 VEEIMDELMSESSDLSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLL 111
Query: 149 QRKLLTRD------TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCK 202
Q + R V +++ +KM+ L +N VL
Sbjct: 112 QEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNS---VLYH 168
Query: 203 SKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVT 262
+ +K +++ +++ + + +Y+ +++G +QQ L R + + P VV+
Sbjct: 169 FRETDKMWDVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVS 224
Query: 263 YGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFK 322
+ +++ YCK D A F+ + + ++PS + + LINGL + EALE
Sbjct: 225 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 284
Query: 323 ANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+G P++ TYN + + + A+ V+ +M G+ P+ TY I+L
Sbjct: 285 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILL 334
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 121/282 (42%), Gaps = 14/282 (4%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXX 162
ALS F+ K G ++ +I L K+ +F + L ++M +++L T
Sbjct: 382 ALSLFNQM-KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 440
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
+ EA + + G ++ +N ++D KS +E+A ELF + G+
Sbjct: 441 LGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGIT 500
Query: 223 PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGF 282
P + ++ L+ G+ + QN+ ++ +K P VV+Y L++AY
Sbjct: 501 PSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDEL 560
Query: 283 YHEMQEKNMMPSPHIFSTLINGLG------------SDKRLDEALEFYEKFKANGFAPET 330
EM+ + + P+ +S + GL ++ ++ + ++ G P+
Sbjct: 561 RREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQ 620
Query: 331 PTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
TYN ++ C + A+ ++ MK + +S TY+I++
Sbjct: 621 ITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILI 662
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 87/218 (39%), Gaps = 47/218 (21%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ EA + + ++ YGL P V + L+D + + EL +M+ G+ P +Y++
Sbjct: 519 IAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSV 578
Query: 231 ----LLEGWSQQQ--NLLR--VNEVC----REMKCECFEPDVVTYG-------------- 264
L GW + ++LR + E C R+M+ E PD +TY
Sbjct: 579 IFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSG 638
Query: 265 ---------------------ILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLIN 303
ILI++ C +A F + +QE+N+ S ++TLI
Sbjct: 639 AFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIK 698
Query: 304 GLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
+ A++ + + GF Y+AV+ C
Sbjct: 699 AHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLC 736
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 103/206 (50%), Gaps = 3/206 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSV--EKAQELFDKMRHRGLVPDLKS 227
K +A E + M + G P++ FN L++ KS + A EL D +R+ GL PD +
Sbjct: 240 KFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAIT 299
Query: 228 YTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
Y LL S+ NL +V +M+ +PD+ TY +I+ Y + EA + E++
Sbjct: 300 YNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELE 359
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
K P +++L+ ++ ++ E Y++ + GF + TYN ++ Y ++D
Sbjct: 360 LKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLD 419
Query: 348 DAYRVVDEMKQ-CGVGPNSRTYDIIL 372
A ++ +MK G P++ TY +++
Sbjct: 420 LALQLYKDMKGLSGRNPDAITYTVLI 445
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 127/286 (44%), Gaps = 21/286 (7%)
Query: 87 PELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFK----VIWN 142
PE +V+N+ G FH+A + + +IEA GK + ++ V+ N
Sbjct: 732 PETAHQVVNQAETKG------FHFA--------CSPMYTDIIEAYGKQKLWQKAESVVGN 777
Query: 143 LVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCK 202
L + + L T ++ + + F M + G P V N L+ LC
Sbjct: 778 LRQSGRTPDLKTWNSLMSAYAQCGCYERARA---IFNTMMRDGPSPTVESINILLHALCV 834
Query: 203 SKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVT 262
+E+ + ++++ G S ++L+ +++ N+ V ++ MK + P +
Sbjct: 835 DGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRL 894
Query: 263 YGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFK 322
Y ++I CK K+ +A EM+E N I+++++ + + + ++ Y++ K
Sbjct: 895 YRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIK 954
Query: 323 ANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
G P+ TYN ++ YC R ++ Y ++ +M+ G+ P TY
Sbjct: 955 ETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTY 1000
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 122/266 (45%), Gaps = 5/266 (1%)
Query: 120 STESFHALIEAL---GKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVE 176
+ ES + L+ AL G++ + V+ ++DM + +++ + + E +
Sbjct: 821 TVESINILLHALCVDGRLEELYVVVEELQDMGFK--ISKSSILLMLDAFARAGNIFEVKK 878
Query: 177 TFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWS 236
+ M+ G P + + ++++LCK K V A+ + +M +L + +L+ ++
Sbjct: 879 IYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYT 938
Query: 237 QQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPH 296
++ + +V + +K EPD TY LI YC+ ++ +E +M+ + P
Sbjct: 939 AIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLD 998
Query: 297 IFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM 356
+ +LI+ G K L++A + +E+ + G + Y+ ++ S A +++ M
Sbjct: 999 TYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMM 1058
Query: 357 KQCGVGPNSRTYDIILQPDKGSKNPR 382
K G+ P T +++ S NP+
Sbjct: 1059 KNAGIEPTLATMHLLMVSYSSSGNPQ 1084
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 146/354 (41%), Gaps = 36/354 (10%)
Query: 24 YPASLTPLSTSPTIKLPQNLSGSLRIHTLIPHTPHADKICKILSKSPNSTIDAALADLSV 83
Y A + S S Q L ++R +P D I S N+ I+A L S
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVP-----DLI------SFNTLINARLK--SG 274
Query: 84 EVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNL 143
++P L E+L+ + N+G+ + +++ L+ A + +
Sbjct: 275 GLTPNLAVELLDMVRNSGL---------------RPDAITYNTLLSACSRDSNLDGAVKV 319
Query: 144 VEDMK----QRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDV 199
EDM+ Q L T + EA F ++E G P+ +N L+
Sbjct: 320 FEDMEAHRCQPDLWTYNAMISVYGRCGL---AAEAERLFMELELKGFFPDAVTYNSLLYA 376
Query: 200 LCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK-CECFEP 258
+ ++ EK +E++ +M+ G D +Y ++ + +Q L ++ ++MK P
Sbjct: 377 FARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNP 436
Query: 259 DVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFY 318
D +TY +LI++ KA + EA EM + + P+ +S LI G + +EA + +
Sbjct: 437 DAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTF 496
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+G P+ Y+ ++ A+ + +M G P+ Y++++
Sbjct: 497 SCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMI 550
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/304 (19%), Positives = 132/304 (43%), Gaps = 2/304 (0%)
Query: 78 LADLSVEVSPELVAEVLNKLSNAG-VLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQ 136
L D+ ++S + +L+ + AG + + + + K G+ + + +IE L K ++
Sbjct: 848 LQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKR 907
Query: 137 FKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNK 195
+ +V +M++ + K+ V+ ++++++ GL+P+ + +N
Sbjct: 908 VRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNT 967
Query: 196 LVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCEC 255
L+ + C+ + E+ L +MR+ GL P L +Y L+ + +Q+ L + ++ E+ +
Sbjct: 968 LIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKG 1027
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
+ D Y ++ + +A M+ + P+ L+ S EA
Sbjct: 1028 LKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAE 1087
Query: 316 EFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQPD 375
+ K T Y++V+ AY S + + EMK+ G+ P+ R + ++
Sbjct: 1088 KVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAA 1147
Query: 376 KGSK 379
SK
Sbjct: 1148 SFSK 1151
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 84/190 (44%), Gaps = 2/190 (1%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRH-RGLVPDLKSYTILLEG 234
E +++M+K G + +N ++ + K ++ A +L+ M+ G PD +YT+L++
Sbjct: 388 EVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDS 447
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
+ + + EM +P + TY LI Y KA K +EA + M P
Sbjct: 448 LGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPD 507
Query: 295 PHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD 354
+S +++ L +A Y ++G P Y ++ R DD + +
Sbjct: 508 NLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIR 567
Query: 355 EMKQ-CGVGP 363
+M++ CG+ P
Sbjct: 568 DMEELCGMNP 577
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 109/258 (42%), Gaps = 18/258 (6%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXK 170
++ GF +++ +I GK Q + L +DMK D T +
Sbjct: 394 QKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANR 453
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
EA +M G+KP + ++ L+ K+ E+A++ F M G PD +Y++
Sbjct: 454 TVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSV 513
Query: 231 LLEGWSQQQNLLRVNE------VCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYH 284
+L+ LLR NE + R+M + P Y ++I K + D+
Sbjct: 514 MLD------VLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIR 567
Query: 285 EMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSM 344
+M+E M I S L+ G + D A + NG+ E T +++G+Y S
Sbjct: 568 DMEELCGMNPLEISSVLVKG----ECFDLAARQLKVAITNGYELENDTLLSILGSYSSSG 623
Query: 345 RMDDAYRVVDEMKQCGVG 362
R +A+ +++ +K+ G
Sbjct: 624 RHSEAFELLEFLKEHASG 641
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 88/202 (43%), Gaps = 1/202 (0%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGL-VPDLKSYTIL 231
EA + F + G + S +V V CK E A ++ ++ +G YT +
Sbjct: 699 EASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDI 758
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+E + +Q+ + V ++ PD+ T+ L++AY + Y+ A ++ M
Sbjct: 759 IEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGP 818
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P+ + L++ L D RL+E E+ + GF + ++ A+ + + + +
Sbjct: 819 SPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKK 878
Query: 352 VVDEMKQCGVGPNSRTYDIILQ 373
+ MK G P R Y ++++
Sbjct: 879 IYSSMKAAGYLPTIRLYRMMIE 900
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 99/215 (46%), Gaps = 1/215 (0%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTR-DTXXXXXXXXXXXXKV 171
K+ G + +++ LI + R+ + + L++ M+ L + DT +
Sbjct: 954 KETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCL 1013
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
++A + FE++ GLK + S ++ ++ + S S KA++L M++ G+ P L + +L
Sbjct: 1014 EQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLL 1073
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+ +S N +V +K E + Y +I+AY ++K Y+ + EM+++ +
Sbjct: 1074 MVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGL 1133
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGF 326
P I++ + K E + + + GF
Sbjct: 1134 EPDHRIWTCFVRAASFSKEKIEVMLLLKALEDIGF 1168
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 98/243 (40%), Gaps = 11/243 (4%)
Query: 103 LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXX 161
LAL + + G ++ LI++LGK + L+ +M + T T
Sbjct: 420 LALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSAL 479
Query: 162 XXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGL 221
K +EA +TF M + G KP+ ++ ++DVL + KA L+ M G
Sbjct: 480 ICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGH 539
Query: 222 VPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYC---KAKKYDE 278
P Y +++ G ++ + + R+M+ C + +L+ C A++
Sbjct: 540 TPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKV 599
Query: 279 AVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVG 338
A+ +E++ ++ +++ S R EA E E K + + A++
Sbjct: 600 AITNGYELENDTLL-------SILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIV 652
Query: 339 AYC 341
+C
Sbjct: 653 LHC 655
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 89/173 (51%), Gaps = 1/173 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV-PDLKSY 228
+V EA + +++ + P+ +N L+ LCK K + E D+MR V PDL S+
Sbjct: 174 RVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSF 233
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
TIL++ +NL + ++ F+PD Y ++ +C K EAVG Y +M+E
Sbjct: 234 TILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKE 293
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
+ + P ++TLI GL R++EA + + G+ P+T TY +++ C
Sbjct: 294 EGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 99/194 (51%), Gaps = 1/194 (0%)
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
M GL+P+ + V LC++ V++A++L ++ + PD +Y LL+ + ++
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 241 LLRVNEVCREMKCEC-FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
L V E EM+ + +PD+V++ ILI+ C +K EA+ ++ P +++
Sbjct: 210 LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYN 269
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQC 359
T++ G + + EA+ Y+K K G P+ TYN ++ + R+++A + M
Sbjct: 270 TIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDA 329
Query: 360 GVGPNSRTYDIILQ 373
G P++ TY ++
Sbjct: 330 GYEPDTATYTSLMN 343
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 72/160 (45%), Gaps = 5/160 (3%)
Query: 118 KHS---TESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXKVK 172
KHS T +++ L++ L K + V++ V++M+ + D + ++
Sbjct: 188 KHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLR 247
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA+ K+ G KP+ +N ++ C +A ++ KM+ G+ PD +Y L+
Sbjct: 248 EAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLI 307
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCK 272
G S+ + + M +EPD TY L+N C+
Sbjct: 308 FGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 74/188 (39%), Gaps = 38/188 (20%)
Query: 223 PDLKSYTILLEGWSQ--QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAV 280
P ++ ILL + ++ V+ V M EPD VT I + + C+ + DEA
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 281 GFYHEMQEKNMMPSPHI------------------------------------FSTLING 304
E+ EK+ P + F+ LI+
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDN 239
Query: 305 LGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPN 364
+ + K L EA+ K GF P+ YN ++ +C + +A V +MK+ GV P+
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD 299
Query: 365 SRTYDIIL 372
TY+ ++
Sbjct: 300 QITYNTLI 307
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 3/217 (1%)
Query: 127 LIEALGKI-RQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFEKMEKY 184
LI L K R K +W + E M ++ + ++D +EA+ +MEK
Sbjct: 314 LITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKK 373
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
G++ +N L+D KS +E+ + LF +MR +GL P +Y IL++ ++++ V
Sbjct: 374 GIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIV 433
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKY-DEAVGFYHEMQEKNMMPSPHIFSTLIN 303
+ REM+ EP+V +Y LI+AY + KK D A + M++ + PS H ++ LI+
Sbjct: 434 ETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIH 493
Query: 304 GLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
++A +E+ G P TY +V+ A+
Sbjct: 494 AYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAF 530
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 121/265 (45%), Gaps = 3/265 (1%)
Query: 124 FHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTX--XXXXXXXXXXXKVKEAVETFEKM 181
++A I L +++ W + E M + + + KE E FEKM
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
+ G+K F LV C E+A + +M +G+ + Y L++ +++ ++
Sbjct: 336 SEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHI 395
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
V + EM+ + +P TY IL++AY + + D EM++ + P+ ++ L
Sbjct: 396 EEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCL 455
Query: 302 INGLGSDKRL-DEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
I+ G K++ D A + + + K G P + +Y A++ AY S + AY +EM + G
Sbjct: 456 ISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEG 515
Query: 361 VGPNSRTYDIILQPDKGSKNPRSLL 385
+ P+ TY +L + S + L+
Sbjct: 516 IKPSVETYTSVLDAFRRSGDTGKLM 540
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 124/276 (44%), Gaps = 11/276 (3%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL--TRDTXXXXXXXXXXXXK 170
+ KG K S +++ L++A + Q ++ L+ +M+ L +
Sbjct: 406 RDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKM 465
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
A + F +M+K GLKP + L+ S EKA F++M G+ P +++YT
Sbjct: 466 SDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTS 525
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+L+ + + + ++ E+ + M E + +TY L++ + K Y EA E +
Sbjct: 526 VLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMG 585
Query: 291 MMPSPHIFSTLINGL---GSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
+ PS ++ L+N G D +L + L ++ A P++ TY+ ++ A+
Sbjct: 586 LQPSVMTYNMLMNAYARGGQDAKLPQLL---KEMAALNLKPDSITYSTMIYAFVRVRDFK 642
Query: 348 DAYRVVDEMKQCGVGPNSRTYD---IILQPDKGSKN 380
A+ M + G P+ R+Y+ IL+ +KN
Sbjct: 643 RAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAKTKN 678
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 141/335 (42%), Gaps = 12/335 (3%)
Query: 50 HTLIPHTPHADKICK-ILSKSPN----STIDAALADLSVEVSPELVAEVLNKLSNAGVL- 103
TL H P + + IL + N T+ L+ VS E L + +G +
Sbjct: 160 QTLGVHIPFESGVAREILELAKNLKENQTLGEMLSGFERRVSDTECVEALVMMGESGFVK 219
Query: 104 -ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXX 162
L F+ W Q+ S + L LG+ R I L+ ++ ++ RD
Sbjct: 220 SCLYFYEWMSLQEPSLASPRACSVLFTLLGRERMADYILLLLSNLPDKEEF-RDVRLYNA 278
Query: 163 XXX--XXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKS-KSVEKAQELFDKMRHR 219
+ +A E +E M+K + P+ L+ L K+ +S ++ E+F+KM +
Sbjct: 279 AISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEK 338
Query: 220 GLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEA 279
G+ + L++ + + + EM+ + + + Y L++AY K+ +E
Sbjct: 339 GVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEV 398
Query: 280 VGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
G + EM++K + PS ++ L++ + D + + G P +Y ++ A
Sbjct: 399 EGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISA 458
Query: 340 YCWSMRMDD-AYRVVDEMKQCGVGPNSRTYDIILQ 373
Y + +M D A MK+ G+ P+S +Y ++
Sbjct: 459 YGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIH 493
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
F++M + G+KP+ + F ++ ++ ++A E F+KM G PD + +++ + +
Sbjct: 198 FDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGR 257
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
N+ + + E + D VT+ LI Y + YD + Y EM+ + P+ I
Sbjct: 258 AGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVI 317
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
++ LI+ +G KR +A Y+ NGF P TY A+V AY + DDA + EMK
Sbjct: 318 YNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMK 377
Query: 358 QCGVGPNSRTYDIIL 372
+ G+ Y+ +L
Sbjct: 378 EKGLSLTVILYNTLL 392
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 110/238 (46%), Gaps = 36/238 (15%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDK---------------- 215
K AVE FEKM +G +P+ ++D ++ +V+ A L+D+
Sbjct: 227 KRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTL 286
Query: 216 -------------------MRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECF 256
M+ G+ P+L Y L++ + + + + +++ F
Sbjct: 287 IRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGF 346
Query: 257 EPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALE 316
P+ TY L+ AY +A+ D+A+ Y EM+EK + + +++TL++ ++ +DEA E
Sbjct: 347 TPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFE 406
Query: 317 FYEKFK-ANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
++ K P++ T+++++ Y S R+ +A + +M++ G P ++Q
Sbjct: 407 IFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQ 464
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 113/261 (43%), Gaps = 4/261 (1%)
Query: 110 WAEKQKGFKHSTE--SFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXX 166
W EK F + + A+I+A G+ + +L + + K + T
Sbjct: 232 WFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYG 291
Query: 167 XXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLK 226
+ +E+M+ G+KP + +N+L+D + ++K +A+ ++ + G P+
Sbjct: 292 VSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWS 351
Query: 227 SYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
+Y L+ + + + + REMK + V+ Y L++ + DEA + +M
Sbjct: 352 TYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDM 411
Query: 287 QE-KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMR 345
+ + P FS+LI R+ EA + + GF P +V+ Y + +
Sbjct: 412 KNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQ 471
Query: 346 MDDAYRVVDEMKQCGVGPNSR 366
+DD R D++ + G+ P+ R
Sbjct: 472 VDDVVRTFDQVLELGITPDDR 492
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 108/246 (43%), Gaps = 9/246 (3%)
Query: 90 VAEVLNKLSNAGV--LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDM 147
+A +++ AG +ALS + A +K ++ +F LI G + N+ E+M
Sbjct: 248 MAAMIDAYGRAGNVDMALSLYDRARTEK-WRIDAVTFSTLIRIYGVSGNYDGCLNIYEEM 306
Query: 148 KQRKLLTRDTXXXXXXXXXXXXKVK---EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSK 204
K L + + K +A ++ + G P S + LV +++
Sbjct: 307 KA--LGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRAR 364
Query: 205 SVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK-CECFEPDVVTY 263
+ A ++ +M+ +GL + Y LL + + + E+ ++MK CE +PD T+
Sbjct: 365 YGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTF 424
Query: 264 GILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKA 323
LI Y + + EA +M+E P+ + +++I G K++D+ + +++
Sbjct: 425 SSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLE 484
Query: 324 NGFAPE 329
G P+
Sbjct: 485 LGITPD 490
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 82/198 (41%), Gaps = 37/198 (18%)
Query: 186 LKP--EVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLR 243
+KP EV +N + V KSK +EK+++LFD+M RG+ PD ++T ++ Q R
Sbjct: 169 MKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKR 228
Query: 244 VNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLIN 303
E +M EPD VT + +I+
Sbjct: 229 AVEWFEKMSSFGCEPDNVT-----------------------------------MAAMID 253
Query: 304 GLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGP 363
G +D AL Y++ + + + T++ ++ Y S D + +EMK GV P
Sbjct: 254 AYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKP 313
Query: 364 NSRTYDIILQPDKGSKNP 381
N Y+ ++ +K P
Sbjct: 314 NLVIYNRLIDSMGRAKRP 331
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 131/284 (46%), Gaps = 4/284 (1%)
Query: 93 VLNKLSNAGV--LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR 150
++N+L G +A+ F A K KG + S+ LI+A K +++ + L+ M +R
Sbjct: 351 LINRLCKEGKKEVAVGFLDEASK-KGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAER 409
Query: 151 KLLTRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKA 209
T + +AV K+ G+ P+ + +N L+ LCK+ A
Sbjct: 410 GCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPA 469
Query: 210 QELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINA 269
+ LF +M R ++PD Y L++G+ + + +V + + DVV + +I
Sbjct: 470 KLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKG 529
Query: 270 YCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPE 329
+C++ DEA+ + M E++++P +ST+I+G + + A++ + + N P
Sbjct: 530 FCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPN 589
Query: 330 TPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
TY +++ +C A EM+ + PN TY +++
Sbjct: 590 VVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIR 633
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 126/296 (42%), Gaps = 36/296 (12%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVK 172
K KGF + E+F +I K F L+ ++K+R L K
Sbjct: 267 KLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYK 326
Query: 173 -EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+ E+ + KP+V+ +N L++ LCK E A D+ +GL+P+ SY L
Sbjct: 327 VDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPL 386
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVG---------- 281
++ + + + +++ +M +PD+VTYGILI+ + D+AV
Sbjct: 387 IQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGV 446
Query: 282 -------------------------FYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALE 316
+ EM ++N++P ++++TLI+G DEA +
Sbjct: 447 SPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARK 506
Query: 317 FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+ G + +NA++ +C S +D+A ++ M + + P+ TY I+
Sbjct: 507 VFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTII 562
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 177/413 (42%), Gaps = 72/413 (17%)
Query: 20 LSKPYPASLTPLSTSPTIKLPQNLSGSLRIHTLIPHTPHADKICK----ILSKSPN--ST 73
+SK + + PLS + S S R H +P TP K+ IL N
Sbjct: 1 MSKTLLSRIKPLSNP-------HASNSFRSH--LPITPRIKKLVSDTVSILKTQQNWSQI 51
Query: 74 IDAALADLSV---EVSPELVAEVLNKLSNAGVLALSFFHW--AEKQKGFKHSTESFHALI 128
+D AD V ++SP V +++ + + + F W +EK+ F + + + +
Sbjct: 52 LDDCFADEEVRFVDISPF----VFDRIQDVEI-GVKLFDWLSSEKKDEFFSNGFACSSFL 106
Query: 129 EALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFEKM-EKYGL 186
+ L + R F I +++ +++ + LT + + +AVE ++ + E Y
Sbjct: 107 KLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDS 166
Query: 187 KPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNE 246
P+V N L+ +L KS+ + A++++D+M RG D S IL++G + + E
Sbjct: 167 VPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKV----E 222
Query: 247 VCREM-----KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
V R++ C P++V Y +I YCK + A + E++ K MP+ F T+
Sbjct: 223 VGRKLIEGRWGKGCI-PNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTM 281
Query: 302 ING-------LGSDKRLDEALE-----------------FYEKFK-----------ANGF 326
ING + SD+ L E E + +K AN
Sbjct: 282 INGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDC 341
Query: 327 APETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQPDKGSK 379
P+ TYN ++ C + + A +DE + G+ PN+ +Y ++Q SK
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSK 394
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 92/169 (54%), Gaps = 1/169 (0%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA + F + G+K +V N ++ C+S +++A ++M LVPD +Y+ ++
Sbjct: 503 EARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTII 562
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+G+ +QQ++ ++ R M+ +P+VVTY LIN +C + A + EMQ ++++
Sbjct: 563 DGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLV 622
Query: 293 PSPHIFSTLINGLGSDKR-LDEALEFYEKFKANGFAPETPTYNAVVGAY 340
P+ ++TLI L + L++A+ ++E N P T+N ++ +
Sbjct: 623 PNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGF 671
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
++ A F++++ G P + F +++ CK + L +++ RGL +
Sbjct: 256 IENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNN 315
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+++ + + E + +PDV TY ILIN CK K + AVGF E +K
Sbjct: 316 IIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKG 375
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
++P+ ++ LI K D A + + G P+ TY ++ S MDDA
Sbjct: 376 LIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAV 435
Query: 351 RVVDEMKQCGVGPNSRTYDIIL 372
+ ++ GV P++ Y++++
Sbjct: 436 NMKVKLIDRGVSPDAAIYNMLM 457
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A++ F MEK KP V + L++ C + A+E F +M+ R LVP++ +YT L+
Sbjct: 574 AIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIR 633
Query: 234 GWSQQQNLLRVN----EVCREMKCECFEPDVVTYGILINAYCK---AKKYDEAVG----- 281
+++ + L E+ KC P+ VT+ L+ + K K E G
Sbjct: 634 SLAKESSTLEKAVYYWELMMTNKCV---PNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQ 690
Query: 282 ------FYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNA 335
F+H M+ +++ + L + A F +K GF+P+ ++ A
Sbjct: 691 SSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAA 750
Query: 336 VVGAYC 341
++ +C
Sbjct: 751 ILHGFC 756
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
+T E + YG+K +N L+ LCK +KA + M RG +PD ++ L+ G+
Sbjct: 664 KTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGY 723
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSP 295
++ + M P+V TY +I A E + EM+ + M P
Sbjct: 724 FVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDD 783
Query: 296 HIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDE 355
++ LI+G + ++ Y + A+G P+T TYN ++ + +M A ++ E
Sbjct: 784 FTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKE 843
Query: 356 MKQCGVGPNSRTY 368
M + GV PN+ TY
Sbjct: 844 MGKRGVSPNTSTY 856
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV E +ME+ + P + LVD L K+ A L+ +M RG+ DL YT
Sbjct: 274 KVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYT 333
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L++G + +L + + + + P+VVTY L++ CKA A +M EK
Sbjct: 334 VLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEK 393
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+++P+ +S++ING L+EA+ K + P TY V+ + + + A
Sbjct: 394 SVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMA 453
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
+ EM+ GV N+ D ++
Sbjct: 454 IELSKEMRLIGVEENNYILDALVN 477
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 42/231 (18%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA + +M K G+ P+ +N L+D CK + +A+ L D++ L+ ++TILL
Sbjct: 179 EAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLI----THTILL 234
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
S NL + E R+M F+PDVVT+ +IN CK K E EM+E ++
Sbjct: 235 ---SSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVY 291
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGF-------------------------- 326
P+ ++TL++ L AL Y + G
Sbjct: 292 PNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKT 351
Query: 327 ---------APETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
P TY A+V C + + A ++ +M + V PN TY
Sbjct: 352 FKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTY 402
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 107/233 (45%), Gaps = 35/233 (15%)
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
++ ++KM+ G+KP + N +V +LC++ +E+A + ++M + P+L +Y I L+
Sbjct: 593 LKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDT 652
Query: 235 WSQQQN---LLRVNE--------------------VCR------------EMKCECFEPD 259
S+ + + + +E +C+ +M+ F PD
Sbjct: 653 SSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPD 712
Query: 260 VVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYE 319
VT+ L++ Y +A+ Y M E + P+ ++T+I GL + E ++
Sbjct: 713 TVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLS 772
Query: 320 KFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+ K+ G P+ TYNA++ M + + EM G+ P + TY++++
Sbjct: 773 EMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLI 825
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 91/196 (46%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
++ M + G++P+++ FN +++ K E +L+DKM+ G+ P L S I++ +
Sbjct: 561 YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCE 620
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ + +M P++ TY I ++ K K+ D + + + S +
Sbjct: 621 NGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQV 680
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
++TLI L +A +A GF P+T T+N+++ Y + A M
Sbjct: 681 YNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMM 740
Query: 358 QCGVGPNSRTYDIILQ 373
+ G+ PN TY+ I++
Sbjct: 741 EAGISPNVATYNTIIR 756
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 98/197 (49%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+ A+ + +M G+ ++ + L+D L K+ + +A++ F + VP++ +YT L
Sbjct: 311 RHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTAL 370
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++G + +L + +M + P+VVTY +IN Y K +EAV +M+++N+
Sbjct: 371 VDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNV 430
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
+P+ + T+I+GL + + A+E ++ + G +A+V R+ +
Sbjct: 431 VPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKG 490
Query: 352 VVDEMKQCGVGPNSRTY 368
+V +M GV + Y
Sbjct: 491 LVKDMVSKGVTLDQINY 507
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (42%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
K+A ME G P+ FN L+ V KA + M G+ P++ +Y +
Sbjct: 695 KKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTI 754
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+ G S + V++ EMK PD TY LI+ K ++ Y EM +
Sbjct: 755 IRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGL 814
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
+P ++ LI+ + ++ +A E ++ G +P T TY ++ C
Sbjct: 815 VPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLC 864
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 1/191 (0%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEA 174
G K S + ++ LI L K+ K ++ DM+ R + T V++A
Sbjct: 673 GIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKA 732
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
+ T+ M + G+ P V+ +N ++ L + +++ + +M+ RG+ PD +Y L+ G
Sbjct: 733 LSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISG 792
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
++ N+ + EM + P TY +LI+ + K +A EM ++ + P+
Sbjct: 793 QAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPN 852
Query: 295 PHIFSTLINGL 305
+ T+I+GL
Sbjct: 853 TSTYCTMISGL 863
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 104/218 (47%), Gaps = 3/218 (1%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+E ++M G++ + LV+ L + +++ + L M +G+ D +YT L++
Sbjct: 453 AIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLID 512
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ + + EM+ DVV+Y +LI+ K K A Y M+EK + P
Sbjct: 513 VFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEP 571
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
F+ ++N + L+ ++K K+ G P + N VVG C + +M++A ++
Sbjct: 572 DIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHIL 631
Query: 354 DEMKQCGVGPNSRTYDIILQPDKGSKNPRSLLGFPENE 391
++M + PN TY I L D SK+ R+ F +E
Sbjct: 632 NQMMLMEIHPNLTTYRIFL--DTSSKHKRADAIFKTHE 667
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
+ KM G+ P+V N L+ CK + A L +R+R + D +Y ++ G +
Sbjct: 117 YSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCE 173
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ EM PD V+Y LI+ +CK + A E+ E N++ +
Sbjct: 174 HGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTIL 233
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
S+ N L E Y +GF P+ T+++++ C ++ + ++ EM+
Sbjct: 234 LSSYYN-------LHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREME 286
Query: 358 QCGVGPNSRTYDIIL 372
+ V PN TY ++
Sbjct: 287 EMSVYPNHVTYTTLV 301
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 85/170 (50%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
++EA +TF+ + + P V + LVD LCK+ + A+ + +M + ++P++ +Y+
Sbjct: 345 LREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSS 404
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++ G+ ++ L + R+M+ + P+ TYG +I+ KA K + A+ EM+
Sbjct: 405 MINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIG 464
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
+ + +I L+N L R+ E + + G + Y +++ +
Sbjct: 465 VEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVF 514
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 84/184 (45%), Gaps = 8/184 (4%)
Query: 190 VSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLL-RVNEVC 248
VS F+ L + + + A M G+VPD + + L+ ++ + +V+ +
Sbjct: 58 VSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIY 117
Query: 249 REMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSD 308
+M PDV +LI+++CK + A+ ++ + + ++T+I+GL
Sbjct: 118 SKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEH 174
Query: 309 KRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
DEA +F + G P+T +YN ++ +C A +VDE+ + N T+
Sbjct: 175 GLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISEL----NLITH 230
Query: 369 DIIL 372
I+L
Sbjct: 231 TILL 234
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 13/136 (9%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+KE + +M+ G++P+ +N L+ K +++ + ++ +M GLVP +Y +
Sbjct: 764 IKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNV 823
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYC------------KAKKYDE 278
L+ ++ +L+ E+ +EM P+ TY +I+ C KA E
Sbjct: 824 LISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAE 883
Query: 279 AVGFYHEM-QEKNMMP 293
A G EM +EK +P
Sbjct: 884 AKGLLKEMVEEKGYIP 899
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 118/266 (44%), Gaps = 6/266 (2%)
Query: 103 LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXX 161
LAL FF FKH+ +F +I L Q + L++ MK + + D
Sbjct: 58 LALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISV 117
Query: 162 XXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGL 221
+ AVE F +++++G P V +N ++D L ++ ++ M+ G
Sbjct: 118 ISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGF 177
Query: 222 VPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVG 281
P++ +Y +LL+ + + ++ EM + PD V+Y +I++ C+ E
Sbjct: 178 EPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG-- 235
Query: 282 FYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
E+ E+ P +++ LINGL + A E + G +P +Y+ ++ C
Sbjct: 236 --RELAER-FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLC 292
Query: 342 WSMRMDDAYRVVDEMKQCGVGPNSRT 367
S +++ A+ + +M + G PN T
Sbjct: 293 NSGQIELAFSFLTQMLKRGCHPNIYT 318
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 1/203 (0%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
K A E +M + G+ P V ++ L++VLC S +E A +M RG P++ + + L
Sbjct: 263 KGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSL 322
Query: 232 LEGWSQQQNLLRVNEVCREM-KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++G + ++ +M + +P+VV Y L+ +C +AV + M+E
Sbjct: 323 VKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIG 382
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P+ + +LING LD A+ + K +G P Y +V A C + +A
Sbjct: 383 CSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAE 442
Query: 351 RVVDEMKQCGVGPNSRTYDIILQ 373
+++ M + P+ T++ ++
Sbjct: 443 SLIEIMSKENCAPSVPTFNAFIK 465
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 121/266 (45%), Gaps = 7/266 (2%)
Query: 112 EKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXK 170
E + F+ ++ALI L K +K + L+ +M ++ + + +
Sbjct: 237 ELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQ 296
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM-RHRGLVPDLKSYT 229
++ A +M K G P + + LV + A +L+++M R GL P++ +Y
Sbjct: 297 IELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYN 356
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L++G+ N+++ V M+ P++ TYG LIN + K D AV +++M
Sbjct: 357 TLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTS 416
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P+ +++ ++ L + EA E AP PT+NA + C + R+D A
Sbjct: 417 GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWA 476
Query: 350 YRVVDEMKQ---CGVGPNSRTYDIIL 372
+V +M+Q C PN TY+ +L
Sbjct: 477 EKVFRQMEQQHRC--PPNIVTYNELL 500
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 3/204 (1%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ +AV F ME+ G P + + L++ K S++ A +++KM G P++ YT
Sbjct: 368 IVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTN 427
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++E + + M E P V T+ I C A + D A + +M++++
Sbjct: 428 MVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQH 487
Query: 291 MMPSPHI--FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
P P+I ++ L++GL R++EA + G + TYN ++ C +
Sbjct: 488 RCP-PNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGI 546
Query: 349 AYRVVDEMKQCGVGPNSRTYDIIL 372
A ++V +M G P+ T ++I+
Sbjct: 547 ALQLVGKMMVDGKSPDEITMNMII 570
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 8/191 (4%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
AV + KM G P V + +V+ LC+ ++A+ L + M P + ++ ++
Sbjct: 406 AVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIK 465
Query: 234 GWSQQQNLLRVNEVCREM----KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
G L +V R+M +C P++VTY L++ KA + +EA G E+ +
Sbjct: 466 GLCDAGRLDWAEKVFRQMEQQHRCP---PNIVTYNELLDGLAKANRIEEAYGLTREIFMR 522
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ S ++TL++G + AL+ K +G +P+ T N ++ AYC + + A
Sbjct: 523 GVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERA 582
Query: 350 YRVVDEMKQCG 360
+++D + CG
Sbjct: 583 AQMLD-LVSCG 592
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 72/146 (49%)
Query: 227 SYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
++ +++ + + V + ++MK + F + +I+ Y + + AV ++ +
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRM 346
+E PS I++ +++ L + R+ Y K +GF P TYN ++ A C + ++
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 347 DDAYRVVDEMKQCGVGPNSRTYDIIL 372
D A +++ EM G P++ +Y ++
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVI 223
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+E E M G P++ +N LV+ C+ ++E+ + + GL + +Y LL
Sbjct: 263 AIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLH 322
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ V E+ M + P V+TY ILIN CKA+ A+ F+++M E+ +P
Sbjct: 323 SLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLP 382
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
++T++ + + +D+A+E K P TYN+V+ M A +
Sbjct: 383 DIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELY 442
Query: 354 DEMKQCGVGPNSRT 367
+M G+ P+ T
Sbjct: 443 HQMLDAGIFPDDIT 456
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 98/201 (48%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
++A+ ++ + G P + + LV+++C+ +A E+ + M G PD+ +Y L
Sbjct: 226 EQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSL 285
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+ ++ NL V V + + E + VTY L+++ C + +DE + M + +
Sbjct: 286 VNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSY 345
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P+ ++ LINGL + L A++F+ + P+ TYN V+GA +DDA
Sbjct: 346 CPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIE 405
Query: 352 VVDEMKQCGVGPNSRTYDIIL 372
++ +K P TY+ ++
Sbjct: 406 LLGLLKNTCCPPGLITYNSVI 426
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 97/203 (47%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
++E + + +GL+ +N L+ LC + ++ +E+ + M P + +Y I
Sbjct: 295 LEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNI 354
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ G + + L R + +M + PD+VTY ++ A K D+A+ ++
Sbjct: 355 LINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTC 414
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P ++++I+GL + +ALE Y + G P+ T +++ +C + +++A
Sbjct: 415 CPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAG 474
Query: 351 RVVDEMKQCGVGPNSRTYDIILQ 373
+V+ E G G TY +++Q
Sbjct: 475 QVLKETSNRGNGIRGSTYRLVIQ 497
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 91/201 (45%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
E E M + P V +N L++ LCK++ + +A + F +M + +PD+ +Y +L
Sbjct: 332 EVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVL 391
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
S++ + E+ +K C P ++TY +I+ K +A+ YH+M + +
Sbjct: 392 GAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIF 451
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P +LI G ++EA + ++ G TY V+ C ++ A V
Sbjct: 452 PDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEV 511
Query: 353 VDEMKQCGVGPNSRTYDIILQ 373
V+ M G P+ Y I++
Sbjct: 512 VEIMLTGGCKPDETIYTAIVK 532
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
++ A+ E M G P+V +N ++ + + E+A + G P + +YT+
Sbjct: 190 IRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTV 249
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+E + R EV +M E PD+VTY L+N C+ +E +
Sbjct: 250 LVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHG 309
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ + ++TL++ L S + DE E + P TYN ++ C + + A
Sbjct: 310 LELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAI 369
Query: 351 RVVDEMKQCGVGPNSRTYDIIL 372
+M + P+ TY+ +L
Sbjct: 370 DFFYQMLEQKCLPDIVTYNTVL 391
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 88/204 (43%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ +A + E M ++ P + LV L + ++KA + M G VPD +Y
Sbjct: 119 KLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYN 178
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+++ ++ ++ + +M PDV+TY +I ++A+ F+ + +
Sbjct: 179 MIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQN 238
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P ++ L+ + A+E E G P+ TYN++V C +++
Sbjct: 239 GCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEV 298
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
V+ + G+ N+ TY+ +L
Sbjct: 299 ASVIQHILSHGLELNTVTYNTLLH 322
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 76/167 (45%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ A++ F +M + P++ +N ++ + K V+ A EL +++ P L +Y
Sbjct: 365 LSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNS 424
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+++G +++ + + E+ +M PD +T LI +C+A +EA E +
Sbjct: 425 VIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRG 484
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVV 337
+ +I GL K ++ A+E E G P+ Y A+V
Sbjct: 485 NGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIV 531
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 6/179 (3%)
Query: 194 NKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKC 253
N+++ LC + + A +L + M VP S + L+ G ++ L + + R M
Sbjct: 108 NEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVM 167
Query: 254 ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDE 313
PD +TY ++I CK A+ +M P ++T+I + ++
Sbjct: 168 SGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQ 227
Query: 314 ALEFYEKFKANGFAPETPTYNA---VVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYD 369
A+ F++ NG P TY +V YC S R A V+++M G P+ TY+
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSAR---AIEVLEDMAVEGCYPDIVTYN 283
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%)
Query: 257 EPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALE 316
E D T +++ C K +A M N +P S L+ GL +LD+A+
Sbjct: 101 ENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMC 160
Query: 317 FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+G P+T TYN ++G C + A ++++M G P+ TY+ +++
Sbjct: 161 ILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIR 217
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 123/278 (44%), Gaps = 39/278 (14%)
Query: 98 SNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDT 157
SN G+L+L F + +G+ SF++++ + K+ Q
Sbjct: 34 SNCGILSLKFLAYL-VSRGYTPHRSSFNSVVSFVCKLGQ--------------------- 71
Query: 158 XXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMR 217
VK A + M ++G +P+V +N L+D C++ + A + + +R
Sbjct: 72 -------------VKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLR 118
Query: 218 -HRGLV--PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAK 274
G + PD+ S+ L G+S+ + L V V + +C P+VVTY I+ +CK+
Sbjct: 119 ASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDTFCKSG 177
Query: 275 KYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYN 334
+ A+ +H M+ + P+ F+ LI+G L+ A+ Y++ + + TY
Sbjct: 178 ELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYT 237
Query: 335 AVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
A++ +C M A + M + V PNS Y I+
Sbjct: 238 ALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTII 275
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 124/267 (46%), Gaps = 7/267 (2%)
Query: 103 LALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXX 161
LAL FH + K+ + +F LI+ K +V +L ++M++ ++ L T
Sbjct: 181 LALKSFH-SMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTAL 239
Query: 162 XXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGL 221
+++ A E + +M + ++P + ++D + + A + KM ++G+
Sbjct: 240 IDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGM 299
Query: 222 VPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVG 281
D+ +Y +++ G L E+ +M+ PD+V + ++NAY K+ + AV
Sbjct: 300 RLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVN 359
Query: 282 FYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
YH++ E+ P ST+I+G+ + +L EA+ ++ KAN Y ++ A C
Sbjct: 360 MYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKAN-----DVMYTVLIDALC 414
Query: 342 WSMRMDDAYRVVDEMKQCGVGPNSRTY 368
+ R+ ++ + G+ P+ Y
Sbjct: 415 KEGDFIEVERLFSKISEAGLVPDKFMY 441
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 100/206 (48%), Gaps = 7/206 (3%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+KEA E E MEK L P++ F +++ KS ++ A ++ K+ RG PD+ + +
Sbjct: 318 KLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALS 377
Query: 230 ILLEGWSQQQNLLR-VNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
+++G ++ L + C E + + V Y +LI+A CK + E + ++ E
Sbjct: 378 TMIDGIAKNGQLHEAIVYFCIE------KANDVMYTVLIDALCKEGDFIEVERLFSKISE 431
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
++P ++++ I GL L +A + + G + Y ++ M +
Sbjct: 432 AGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVE 491
Query: 349 AYRVVDEMKQCGVGPNSRTYDIILQP 374
A +V DEM G+ P+S +D++++
Sbjct: 492 ARQVFDEMLNSGISPDSAVFDLLIRA 517
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 81/220 (36%), Gaps = 31/220 (14%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVK 172
+G + ++ +I L + K +VEDM++ L+ ++K
Sbjct: 296 NQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMK 355
Query: 173 EAVETFEKMEKYGLKPEVSD------------------------------FNKLVDVLCK 202
AV + K+ + G +P+V + L+D LCK
Sbjct: 356 AAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCK 415
Query: 203 SKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVT 262
+ + LF K+ GLVPD YT + G +Q NL+ ++ M E D++
Sbjct: 416 EGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLA 475
Query: 263 YGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLI 302
Y LI EA + EM + P +F LI
Sbjct: 476 YTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLI 515
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
E F K+ + GL P+ + + LCK ++ A +L +M GL+ DL +YT L+
Sbjct: 421 EVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLI 480
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G + + ++ +V EM PD + +LI AY K A +MQ + ++
Sbjct: 481 YGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540
Query: 293 PS 294
+
Sbjct: 541 TA 542
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++K+A+ E M G+ P+ S + LV+ LCK +V A +L +KM G + +Y
Sbjct: 121 RLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYN 180
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G +L + + + + P+ TY L+ A K + DEAV E+ K
Sbjct: 181 ALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVK 240
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P+ ++ L+ G + R D+A+ + + A GF +YN ++ C R ++A
Sbjct: 241 GGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEA 300
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
++ EM P+ TY+I++
Sbjct: 301 NSLLAEMDGGDRAPSVVTYNILIN 324
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 97/196 (49%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
E + G KP V+ +L+ LCK+ ++KA + + M G++PD +YT L+ +
Sbjct: 94 LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCK 153
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ N+ ++ +M+ + + VTY L+ C ++++ F + +K + P+
Sbjct: 154 RGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFT 213
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
+S L+ ++ DEA++ ++ G P +YN ++ +C R DDA + E+
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELP 273
Query: 358 QCGVGPNSRTYDIILQ 373
G N +Y+I+L+
Sbjct: 274 AKGFKANVVSYNILLR 289
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 95/188 (50%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V A++ EKME +G +N LV LC S+ ++ + +++ +GL P+ +Y+
Sbjct: 157 VGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSF 216
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
LLE +++ ++ E+ + EP++V+Y +L+ +CK + D+A+ + E+ K
Sbjct: 217 LLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKG 276
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ ++ L+ L D R +EA + AP TYN ++ + + R + A
Sbjct: 277 FKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQAL 336
Query: 351 RVVDEMKQ 358
+V+ EM +
Sbjct: 337 QVLKEMSK 344
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 104/203 (51%), Gaps = 2/203 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ ++++ E++ + GL P ++ L++ K + ++A +L D++ +G P+L SY +
Sbjct: 192 LNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNV 251
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
LL G+ ++ + RE+ + F+ +VV+Y IL+ C +++EA EM +
Sbjct: 252 LLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGD 311
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKF-KAN-GFAPETPTYNAVVGAYCWSMRMDD 348
PS ++ LIN L R ++AL+ ++ K N F +YN V+ C ++D
Sbjct: 312 RAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDL 371
Query: 349 AYRVVDEMKQCGVGPNSRTYDII 371
+ +DEM PN TY+ I
Sbjct: 372 VVKCLDEMIYRRCKPNEGTYNAI 394
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 85/206 (41%), Gaps = 2/206 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ +A+ F ++ G K V +N L+ LC E+A L +M P + +Y
Sbjct: 261 RTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYN 320
Query: 230 ILLEGWSQQQNLLRVNEVCREMK--CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
IL+ + + +V +EM F +Y +I CK K D V EM
Sbjct: 321 ILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMI 380
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
+ P+ ++ + + + ++ EA + Y +V+ + C
Sbjct: 381 YRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTF 440
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILQ 373
A++++ EM +CG P++ TY +++
Sbjct: 441 AAFQLLYEMTRCGFDPDAHTYSALIR 466
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 112/267 (41%), Gaps = 12/267 (4%)
Query: 115 KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQ-RKLLTRDTXXXXXXXXXXXXKVKE 173
KGFK + S++ L+ L +++ +L+ +M + + T + ++
Sbjct: 275 KGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQ 334
Query: 174 AVETFEKMEK--YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI- 230
A++ ++M K + + + +N ++ LCK V+ + D+M +R P+ +Y
Sbjct: 335 ALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAI 394
Query: 231 --LLEGWSQ-QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
L E S+ Q+ + + + KC + Y +I + C+ A +EM
Sbjct: 395 GSLCEHNSKVQEAFYIIQSLSNKQKCCTHD----FYKSVITSLCRKGNTFAAFQLLYEMT 450
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFK-ANGFAPETPTYNAVVGAYCWSMRM 346
P H +S LI GL + A+E + + P +NA++ C R
Sbjct: 451 RCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRT 510
Query: 347 DDAYRVVDEMKQCGVGPNSRTYDIILQ 373
D A V + M + PN TY I+++
Sbjct: 511 DLAMEVFEMMVEKKRMPNETTYAILVE 537
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 102/236 (43%), Gaps = 7/236 (2%)
Query: 93 VLNKLSNAGVLALSFFHWAEKQKG---FKHSTESFHALIEALGKIRQFKVIWNLVEDMKQ 149
++N L+ G + E KG F+ + S++ +I L K + ++ +++M
Sbjct: 322 LINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIY 381
Query: 150 RKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNK-LVDVLCKSKSVE 207
R+ + T KV+EA + + K DF K ++ LC+ +
Sbjct: 382 RRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQ-KCCTHDFYKSVITSLCRKGNTF 440
Query: 208 KAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK-CECFEPDVVTYGIL 266
A +L +M G PD +Y+ L+ G + EV M+ E +P V + +
Sbjct: 441 AAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAM 500
Query: 267 INAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFK 322
I CK ++ D A+ + M EK MP+ ++ L+ G+ + L+ A E ++ +
Sbjct: 501 ILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELR 556
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 140/332 (42%), Gaps = 28/332 (8%)
Query: 59 ADKICKILSKSPNST-IDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKG- 116
A ++ +++K S ++ L ++ + +S V VL +L + AL+FFHW
Sbjct: 197 AGEVSAVVTKGDWSCEVERELQEMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGGSS 256
Query: 117 --FKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKE 173
++HST +++A + L + W++V++MK + DT + E
Sbjct: 257 SGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAE 316
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCK------------SKSVEKAQELFDKMRHRGL 221
V+ +E M KP + D + L+ L S+ E + K + G+
Sbjct: 317 TVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGI 376
Query: 222 VPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVG 281
L S E E+ + M+ +EPD +TY L+ CKAK+ +EA G
Sbjct: 377 HRSLTSVGRFDEA----------EEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARG 426
Query: 282 FYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
+M+ + P ++ LI G + LD+AL + GF ++ + ++ +
Sbjct: 427 VLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFV 486
Query: 342 WSMRMDDAYRVVDEM-KQCGVGPNSRTYDIIL 372
+ + A + EM K V P TY +++
Sbjct: 487 IHNKFEGASIFLMEMVKNANVKPWQSTYKLLI 518
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 93/186 (50%), Gaps = 4/186 (2%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ EA E + M G +P+ +++LV LCK+K +E+A+ + D+M +G PD+K++T
Sbjct: 385 RFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWT 444
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM-QE 288
IL++G + L + M + F+ D +LI+ + K++ A F EM +
Sbjct: 445 ILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKN 504
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
N+ P + LI+ L K+ +EAL+ + K + ++ + + ++D
Sbjct: 505 ANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFG---TLED 561
Query: 349 AYRVVD 354
A + +D
Sbjct: 562 AKKFLD 567
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 88/185 (47%), Gaps = 6/185 (3%)
Query: 193 FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK 252
+N + VL + SV + + D+M+ G DL +Y + + + + + ++ M
Sbjct: 266 YNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMM 325
Query: 253 CECFEPDVVTYGILINAYCKAKKYDEAVGFY----HEMQEKNMMPSPHIFSTLINGLGSD 308
F+P + +L+ + D + F +E K++ S ++ + L S
Sbjct: 326 DGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSL--SKAVYDGIHRSLTSV 383
Query: 309 KRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
R DEA E + + G+ P+ TY+ +V C + R+++A V+D+M+ G P+ +T+
Sbjct: 384 GRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTW 443
Query: 369 DIILQ 373
I++Q
Sbjct: 444 TILIQ 448
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 5/181 (2%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+++EA ++ME G P++ + L+ CK+ ++KA F M +G D
Sbjct: 420 RLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLD 479
Query: 230 ILLEGWSQQQNLLRVNEVCREM-KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
+L++G+ + EM K +P TY +LI+ K KK +EA+ M++
Sbjct: 480 VLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKK 539
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
+N F + G+ L++A +F + + +P Y V+ A+ R+ D
Sbjct: 540 QNYPAYAEAFDGYLAKFGT---LEDAKKFLDVLSSKD-SPSFAAYFHVIEAFYREGRLTD 595
Query: 349 A 349
A
Sbjct: 596 A 596
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 95/188 (50%)
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
M K G+ P+V +N L+ LCK ++A +L M++ G+ PD SY ++++G +
Sbjct: 326 MVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGD 385
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
+ R NE M P+V+ + ++I+ Y + A+ + M + P+ + +
Sbjct: 386 VNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNA 445
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
LI+G RL +A + ++ P+T TYN ++GA C + A+++ DEM + G
Sbjct: 446 LIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRG 505
Query: 361 VGPNSRTY 368
P+ TY
Sbjct: 506 CQPDIITY 513
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 4/207 (1%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+++A +M + G P +N L+ LC +V+KA LF+ M G+ P+ + I
Sbjct: 172 IEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNI 231
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEP----DVVTYGILINAYCKAKKYDEAVGFYHEM 286
++ Q+ + N+ E + + D+V IL+++ K +A+ + EM
Sbjct: 232 IVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEM 291
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRM 346
+KN+ +++ +I GL S + A F G P+ TYN ++ A C +
Sbjct: 292 SQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKF 351
Query: 347 DDAYRVVDEMKQCGVGPNSRTYDIILQ 373
D+A + M+ GV P+ +Y +I+Q
Sbjct: 352 DEACDLHGTMQNGGVAPDQISYKVIIQ 378
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 6/176 (3%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEK-----AQELFDKMRHRGLVPDL 225
V +A+ F M KYG++P N +V LC+ + +E+ D + + D+
Sbjct: 207 VDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPL-DI 265
Query: 226 KSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHE 285
TIL++ + N+++ EV +EM + D V Y ++I C + A GF +
Sbjct: 266 VICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCD 325
Query: 286 MQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
M ++ + P ++TLI+ L + + DEA + + + G AP+ +Y ++ C
Sbjct: 326 MVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLC 381
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 96/202 (47%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V +A+E +++M + + + +N ++ LC S ++ A M RG+ PD+ +Y
Sbjct: 281 VVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNT 340
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ ++ ++ M+ PD ++Y ++I C + A F M + +
Sbjct: 341 LISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSS 400
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
++P +++ +I+G G AL + G P T NA++ Y R+ DA+
Sbjct: 401 LLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAW 460
Query: 351 RVVDEMKQCGVGPNSRTYDIIL 372
V +EM+ + P++ TY+++L
Sbjct: 461 WVKNEMRSTKIHPDTTTYNLLL 482
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 68/165 (41%)
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEV 247
PEV +N ++D + A + + M G+ P++ + L+ G+ + L+ V
Sbjct: 403 PEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWV 462
Query: 248 CREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGS 307
EM+ PD TY +L+ A C A Y EM + P ++ L+ GL
Sbjct: 463 KNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCW 522
Query: 308 DKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
RL +A + +A G + + + Y R +AY V
Sbjct: 523 KGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLV 567
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 77/172 (44%), Gaps = 17/172 (9%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
KE E + Y LK + L + +C++KS + L H ++ DL
Sbjct: 81 KEDPEAIFNVLDYILKSSLDRLASLRESVCQTKSFDYDDCL---SIHSSIMRDL-----C 132
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
L+G LR ++M P ++T+ L+N CKA ++A G EM+E M
Sbjct: 133 LQGKLDAALWLR-----KKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE--M 185
Query: 292 MPSPHI--FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
PSP+ ++TLI GL S +D+AL + G P T N +V A C
Sbjct: 186 GPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALC 237
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 107/239 (44%), Gaps = 35/239 (14%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ A + F+ ME+ G++P++ ++ L+D K+ + +LF + H+G+ D+ ++
Sbjct: 301 EMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFS 360
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ + + +L + V + M C+ P+VVTY ILI C+ + EA G Y ++ ++
Sbjct: 361 STIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTY---------------- 333
M PS +S+LI+G L YE G+ P+ Y
Sbjct: 421 GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA 480
Query: 334 -------------------NAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
N+++ +C R D+A +V M G+ P+ T+ +++
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 108/245 (44%), Gaps = 41/245 (16%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ EA + ++ K G++P + ++ L+D CK ++ L++ M G PD+ Y
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG 465
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L++G S+Q +L +M + +VV + LI+ +C+ ++DEA+ + M
Sbjct: 466 VLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 290 NMMPSPHIFSTLI---------------------------NGLGSD-------------- 308
+ P F+T++ N + +D
Sbjct: 526 GIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 585
Query: 309 KRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
R+++A +F+ P+ TYN ++ YC R+D+A R+ + +K GPN+ T
Sbjct: 586 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTL 645
Query: 369 DIILQ 373
I++
Sbjct: 646 TILIH 650
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 3/188 (1%)
Query: 142 NLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLC 201
NL+E + ++T +T ++ EA FE ++ P L+ VLC
Sbjct: 597 NLIEGKMEPDIVTYNTMICGYCSLR---RLDEAERIFELLKVTPFGPNTVTLTILIHVLC 653
Query: 202 KSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVV 261
K+ ++ A +F M +G P+ +Y L++ +S+ ++ ++ EM+ + P +V
Sbjct: 654 KNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIV 713
Query: 262 TYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKF 321
+Y I+I+ CK + DEA +H+ + ++P ++ LI G RL EA YE
Sbjct: 714 SYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 773
Query: 322 KANGFAPE 329
NG P+
Sbjct: 774 LRNGVKPD 781
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 95/200 (47%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
++ F+ M++ + +++ N ++ +L K +E A + F+ + + PD+ +Y ++
Sbjct: 556 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 615
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+ + L + +K F P+ VT ILI+ CK D A+ + M EK P
Sbjct: 616 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP 675
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ + L++ ++ + + +E+ + G +P +Y+ ++ C R+D+A +
Sbjct: 676 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 735
Query: 354 DEMKQCGVGPNSRTYDIILQ 373
+ + P+ Y I+++
Sbjct: 736 HQAIDAKLLPDVVAYAILIR 755
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 105/212 (49%), Gaps = 5/212 (2%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++++A + F + + ++P++ +N ++ C + +++A+ +F+ ++ P+ + T
Sbjct: 587 RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLT 646
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL+ + ++ + M + +P+ VTYG L++ + K+ + + + EMQEK
Sbjct: 647 ILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK 706
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ PS +S +I+GL R+DEA + + P+ Y ++ YC R+ +A
Sbjct: 707 GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 766
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQPDKGSKNP 381
+ + M + GV P D +LQ NP
Sbjct: 767 ALLYEHMLRNGVKP-----DDLLQRALSEYNP 793
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 101/206 (49%), Gaps = 6/206 (2%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A +++M G+ P V + L+ LC+ + +A ++ ++ RG+ P + +Y+ L++
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLID 434
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+ + NL + +M + PDVV YG+L++ K A+ F +M +++
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL 494
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVV------GAYCWSMRMD 347
+ +F++LI+G R DEAL+ + G P+ T+ V+ A+C M+
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPT 554
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILQ 373
++ D M++ + + ++++
Sbjct: 555 IGLQLFDLMQRNKISADIAVCNVVIH 580
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 4/206 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPE-VSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
+V + F+K+ + G++P VS ++D L V KA + + RG + S
Sbjct: 196 RVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSC 255
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECF-EPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
+L+G S Q + V + +C P+VVT+ LIN +CK + D A + M+
Sbjct: 256 NKVLKGLSVDQ--IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVME 313
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
++ + P +STLI+G L + + + G + +++ + Y S +
Sbjct: 314 QRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLA 373
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILQ 373
A V M G+ PN TY I+++
Sbjct: 374 TASVVYKRMLCQGISPNVVTYTILIK 399
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 97/221 (43%), Gaps = 1/221 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V +A++ + + G + + NK++ L +E A L + G P++ ++
Sbjct: 232 EVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFC 290
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G+ ++ + R ++ + M+ EPD++ Y LI+ Y KA + + K
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ +FS+ I+ L A Y++ G +P TY ++ C R+ +A
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQPDKGSKNPRSLLGFPEN 390
+ + ++ + G+ P+ TY ++ N RS E+
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYED 451
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 107/239 (44%), Gaps = 35/239 (14%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ A + F+ ME+ G++P++ ++ L+D K+ + +LF + H+G+ D+ ++
Sbjct: 301 EMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFS 360
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ + + +L + V + M C+ P+VVTY ILI C+ + EA G Y ++ ++
Sbjct: 361 STIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTY---------------- 333
M PS +S+LI+G L YE G+ P+ Y
Sbjct: 421 GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA 480
Query: 334 -------------------NAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
N+++ +C R D+A +V M G+ P+ T+ +++
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 101/204 (49%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ EA + ++ K G++P + ++ L+D CK ++ L++ M G PD+ Y
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG 465
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L++G S+Q +L +M + +VV + LI+ +C+ ++DEA+ + M
Sbjct: 466 VLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P F+T++ + RL+EAL + + G P+ Y ++ A+C M+
Sbjct: 526 GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIG 585
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
++ D M++ + + ++++
Sbjct: 586 LQLFDLMQRNKISADIAVCNVVIH 609
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 98/195 (50%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A +++M G+ P V + L+ LC+ + +A ++ ++ RG+ P + +Y+ L++
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLID 434
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+ + NL + +M + PDVV YG+L++ K A+ F +M +++
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL 494
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ +F++LI+G R DEAL+ + G P+ T+ V+ R+++A +
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF 554
Query: 354 DEMKQCGVGPNSRTY 368
M + G+ P++ Y
Sbjct: 555 FRMFKMGLEPDALAY 569
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 127/293 (43%), Gaps = 4/293 (1%)
Query: 85 VSPELVAE--VLNKLSNAGVLALSFFHWAEK-QKGFKHSTESFHALIEALGKIRQFKVIW 141
+SP +V ++ L G + +F + + ++G + S ++ +LI+ K + +
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446
Query: 142 NLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFE-KMEKYGLKPEVSDFNKLVDVL 200
L EDM + + F KM ++ V FN L+D
Sbjct: 447 ALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506
Query: 201 CKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDV 260
C+ ++A ++F M G+ PD+ ++T ++ + L + M EPD
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDA 566
Query: 261 VTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEK 320
+ Y LI+A+CK K + + MQ + + + +I+ L R+++A +F+
Sbjct: 567 LAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN 626
Query: 321 FKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
P+ TYN ++ YC R+D+A R+ + +K GPN+ T I++
Sbjct: 627 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIH 679
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 3/188 (1%)
Query: 142 NLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLC 201
NL+E + ++T +T ++ EA FE ++ P L+ VLC
Sbjct: 626 NLIEGKMEPDIVTYNTMICGYCSLR---RLDEAERIFELLKVTPFGPNTVTLTILIHVLC 682
Query: 202 KSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVV 261
K+ ++ A +F M +G P+ +Y L++ +S+ ++ ++ EM+ + P +V
Sbjct: 683 KNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIV 742
Query: 262 TYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKF 321
+Y I+I+ CK + DEA +H+ + ++P ++ LI G RL EA YE
Sbjct: 743 SYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 802
Query: 322 KANGFAPE 329
NG P+
Sbjct: 803 LRNGVKPD 810
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 95/200 (47%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
++ F+ M++ + +++ N ++ +L K +E A + F+ + + PD+ +Y ++
Sbjct: 585 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 644
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+ + L + +K F P+ VT ILI+ CK D A+ + M EK P
Sbjct: 645 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP 704
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ + L++ ++ + + +E+ + G +P +Y+ ++ C R+D+A +
Sbjct: 705 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764
Query: 354 DEMKQCGVGPNSRTYDIILQ 373
+ + P+ Y I+++
Sbjct: 765 HQAIDAKLLPDVVAYAILIR 784
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 105/212 (49%), Gaps = 5/212 (2%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++++A + F + + ++P++ +N ++ C + +++A+ +F+ ++ P+ + T
Sbjct: 616 RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLT 675
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL+ + ++ + M + +P+ VTYG L++ + K+ + + + EMQEK
Sbjct: 676 ILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK 735
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ PS +S +I+GL R+DEA + + P+ Y ++ YC R+ +A
Sbjct: 736 GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 795
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQPDKGSKNP 381
+ + M + GV P D +LQ NP
Sbjct: 796 ALLYEHMLRNGVKP-----DDLLQRALSEYNP 822
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 4/206 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPE-VSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
+V + F+K+ + G++P VS ++D L V KA + + RG + S
Sbjct: 196 RVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSC 255
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECF-EPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
+L+G S Q + V + +C P+VVT+ LIN +CK + D A + M+
Sbjct: 256 NKVLKGLSVDQ--IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVME 313
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
++ + P +STLI+G L + + + G + +++ + Y S +
Sbjct: 314 QRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLA 373
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILQ 373
A V M G+ PN TY I+++
Sbjct: 374 TASVVYKRMLCQGISPNVVTYTILIK 399
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 97/221 (43%), Gaps = 1/221 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V +A++ + + G + + NK++ L +E A L + G P++ ++
Sbjct: 232 EVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFC 290
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G+ ++ + R ++ + M+ EPD++ Y LI+ Y KA + + K
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ +FS+ I+ L A Y++ G +P TY ++ C R+ +A
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQPDKGSKNPRSLLGFPEN 390
+ + ++ + G+ P+ TY ++ N RS E+
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYED 451
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 1/171 (0%)
Query: 172 KEAVETFEKMEK-YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
KEA + +M K YG++P++ +N+++ VLC+S S + + +M + + P S+ +
Sbjct: 163 KEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGL 222
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+++G+ +++ V +V R M V TY I+I CK KK EA +
Sbjct: 223 MIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCR 282
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
M P+ +S LI+G S++ LDEA+ +E NG+ P++ Y ++ C
Sbjct: 283 MRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLC 333
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 7/218 (3%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL--TRDTXXXXXXXXXXXXK 170
K G + E+++ +I L + +++V +M +RK + T + K
Sbjct: 174 KMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEM-ERKWIKPTAASFGLMIDGFYKEEK 232
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
E + M+++G+ V+ +N ++ LCK K +A+ L D + + P+ +Y++
Sbjct: 233 FDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSL 292
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ G+ ++NL + M C ++PD Y LI+ CK ++ A+ E EKN
Sbjct: 293 LIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKN 352
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFY----EKFKAN 324
+PS + L+NGL S ++DEA E EKF N
Sbjct: 353 WVPSFSVMKWLVNGLASRSKVDEAKELIAVVKEKFTRN 390
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 76/173 (43%), Gaps = 1/173 (0%)
Query: 202 KSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREM-KCECFEPDV 260
++ ++++ + F + + +KS LL ++ N V EM K EPD+
Sbjct: 123 RANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDL 182
Query: 261 VTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEK 320
TY +I C++ + EM+ K + P+ F +I+G +++ DE +
Sbjct: 183 ETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRM 242
Query: 321 FKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
G TYN ++ C + +A ++D + C + PNS TY +++
Sbjct: 243 MDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIH 295
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 98/192 (51%), Gaps = 2/192 (1%)
Query: 183 KYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLL 242
+ G+ P+V +N L+ + +++A + +MR G+ PD+ +Y L+ G ++ L
Sbjct: 41 RLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLN 100
Query: 243 RVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHE-MQEKNMMPSPHIFSTL 301
RV ++ EM PD+ +Y L++ Y K ++ EA HE + ++P ++ L
Sbjct: 101 RVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNIL 160
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
++ L D A+E ++ K+ PE TYN ++ C S R+ ++ E+K+ G
Sbjct: 161 LDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGY 219
Query: 362 GPNSRTYDIILQ 373
PN+ TY +L+
Sbjct: 220 TPNAVTYTTMLK 231
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 96/191 (50%), Gaps = 2/191 (1%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ EA +M + G++P+V+ +N L+ K+ + + +LFD+M H GL PD+ SY
Sbjct: 64 IDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNT 123
Query: 231 LLEGWSQQQNLLRVNEVCRE-MKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ + + ++ E + P + TY IL++A CK+ D A+ + ++ +
Sbjct: 124 LMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR 183
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P ++ LINGL +R+ + K +G+ P TY ++ Y + R++
Sbjct: 184 -VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKG 242
Query: 350 YRVVDEMKQCG 360
++ +MK+ G
Sbjct: 243 LQLFLKMKKEG 253
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 2/182 (1%)
Query: 193 FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK 252
N V+ LCK +++E+A+ L G++PD+ +Y L++G+++ + V R M+
Sbjct: 16 LNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMR 75
Query: 253 CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD 312
EPDV TY LI+ K + + + EM + P ++TL++ R
Sbjct: 76 EAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHG 135
Query: 313 EALE-FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDII 371
EA + +E G P TYN ++ A C S D+A + +K V P TY+I+
Sbjct: 136 EAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKS-RVKPELMTYNIL 194
Query: 372 LQ 373
+
Sbjct: 195 IN 196
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 91/220 (41%), Gaps = 37/220 (16%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+E F+ + K +KPE+ +N L++ LCKS+ V + +++ G P+ +YT +L+
Sbjct: 173 AIELFKHL-KSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLK 231
Query: 234 GWSQQQNLLRVNEVCREMK-----------C----------------ECFE--------- 257
+ + + + + ++ +MK C EC
Sbjct: 232 MYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRS 291
Query: 258 PDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEF 317
D+V+Y L+N Y K D E++ K + P + + ++NGL + A +
Sbjct: 292 QDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKH 351
Query: 318 YEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
G P T N ++ C + +D A R+ M+
Sbjct: 352 LACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASME 391
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 73/146 (50%), Gaps = 11/146 (7%)
Query: 170 KVKEAVETFEKMEKYGLKPE-VSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
+ +EA E ++ + G + + + +N L+++ K +++ +L +++ +GL PD ++
Sbjct: 273 RAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTH 332
Query: 229 TILLEGWSQQQNLLRVNEVCREMKC---ECFEPDVVTYGILINAYCKAKKYDEAVGFYHE 285
TI++ G N+ + + C +P VVT LI+ CKA D A+ +
Sbjct: 333 TIIVNGL---LNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFAS 389
Query: 286 MQEKNMMPSPHIFSTLINGLGSDKRL 311
M+ ++ ++++++ L D RL
Sbjct: 390 MEVRD----EFTYTSVVHNLCKDGRL 411
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 92/194 (47%), Gaps = 4/194 (2%)
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
E E+ G P V +N L++ C + +A++++++M+ RG+V D+ +Y ++ G
Sbjct: 270 EMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSN 329
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
+++ E+ R+M + E +TY L+N YCKA D + Y EM+ K
Sbjct: 330 FEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTI 389
Query: 299 STLINGLGSDK---RLDEALEFY-EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD 354
L+ GL D+ R+ EA + + + F P Y +V C +MD A +
Sbjct: 390 EALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQA 449
Query: 355 EMKQCGVGPNSRTY 368
EM G P+ TY
Sbjct: 450 EMVGKGFKPSQETY 463
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 4/174 (2%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ EA + +E+M+ G+ ++ +N ++ LC + V KA+ELF M +G+ +Y
Sbjct: 297 MSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEH 356
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYC---KAKKYDEAVGFYHE-M 286
L+ G+ + ++ V REMK + FE D +T L+ C ++ EA + +
Sbjct: 357 LVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAV 416
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
+E PS + + L+ L D ++D AL + GF P TY A + Y
Sbjct: 417 REAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGY 470
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 100/223 (44%), Gaps = 24/223 (10%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSK------------------SVEKAQE 211
++ AV K+ G+ ++S N L+ + + + SV++A++
Sbjct: 177 EIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKK 236
Query: 212 LFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCEC-FEPDVVTYGILINAY 270
+ K++ P+ ++ ++ + ++ V + REM+ E P+V +Y +L+ AY
Sbjct: 237 MIGKIK-----PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAY 291
Query: 271 CKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPET 330
C EA + EM+ + ++ ++T+I GL S+ + +A E + G
Sbjct: 292 CARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTC 351
Query: 331 PTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
TY +V YC + +D V EMK+ G + T + +++
Sbjct: 352 LTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVE 394
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 105/250 (42%), Gaps = 23/250 (9%)
Query: 77 ALADLSVEVSPELVAEVLNKLSNAGVLALSFFH----------WAEKQK--GFKHSTESF 124
L D+SV+ + +++ ++ + + +SF+ W E ++ G + S+
Sbjct: 225 GLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSY 284
Query: 125 HALIEAL---GKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXX-KVKEAVETFEK 180
+ L+EA G + + + +W E+MK R ++ +V +A E F
Sbjct: 285 NVLMEAYCARGLMSEAEKVW---EEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRD 341
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
M G++ + LV+ CK+ V+ ++ +M+ +G D + L+EG ++
Sbjct: 342 MGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRD 401
Query: 241 LLRVNEVCREMKCEC----FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPH 296
RV E +K F P Y +L+ C+ K D A+ EM K PS
Sbjct: 402 GQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQE 461
Query: 297 IFSTLINGLG 306
+ I+G G
Sbjct: 462 TYRAFIDGYG 471
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 100/200 (50%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+A+ F ++++ G+ P++ +N +++V K+K +A+ L +M G++P+ SY+ LL
Sbjct: 243 KAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLL 302
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ + L V EMK D+ T I+I+ Y + EA + +++ ++
Sbjct: 303 SVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIE 362
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ ++T++ G + EA+ + + TYN ++ Y +M + A +
Sbjct: 363 PNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNL 422
Query: 353 VDEMKQCGVGPNSRTYDIIL 372
V EM+ G+ PN+ TY I+
Sbjct: 423 VQEMQSRGIEPNAITYSTII 442
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 119/246 (48%), Gaps = 1/246 (0%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKV 171
K+ G +++++I GK + F+ L+++M + +L + K
Sbjct: 252 KRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKF 311
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
EA+ F +M++ +++ N ++DV + V++A LF +R + P++ SY +
Sbjct: 312 LEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTI 371
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
L + + + + R M+ + E +VVTY +I Y K ++++A EMQ + +
Sbjct: 372 LRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGI 431
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P+ +ST+I+ G +LD A ++K +++G + Y ++ AY M A R
Sbjct: 432 EPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKR 491
Query: 352 VVDEMK 357
++ E+K
Sbjct: 492 LLHELK 497
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL-----EG-------W 235
P V +N ++ + ++K + A LFD+MR R L PD +Y+ L+ EG W
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 236 SQQQNLLRVN----------EVCREM-------------KCECFEPDVVTYGILINAYCK 272
Q+ RV+ E+ R + K PD+V Y +IN Y K
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 273 AKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPT 332
AK + EA EM E ++P+ +STL++ + + EAL + + K A + T
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTT 332
Query: 333 YNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
N ++ Y + +A R+ +++ + PN +Y+ IL+
Sbjct: 333 CNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILR 373
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 91/200 (45%), Gaps = 4/200 (2%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA+ F M++ ++ V +N ++ + K+ EKA L +M+ RG+ P+ +Y+ ++
Sbjct: 383 EAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTII 442
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
W + L R + ++++ E D V Y +I AY + A HE++ + +
Sbjct: 443 SIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNI 502
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P T I L R +EA + + +G + + ++ Y + R + V
Sbjct: 503 PR----ETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEV 558
Query: 353 VDEMKQCGVGPNSRTYDIIL 372
++M+ G P+S ++L
Sbjct: 559 FEKMRTAGYFPDSNVIAMVL 578
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 83/165 (50%)
Query: 197 VDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECF 256
+ +L K+ E+A +F + G V D+ + ++ +S+ Q + V EV +M+ +
Sbjct: 508 ITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGY 567
Query: 257 EPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALE 316
PD +++NAY K +++++A Y EMQE+ + + +++ S K +
Sbjct: 568 FPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVES 627
Query: 317 FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
+++ +++ + V Y + +++DA RV++ M++ G+
Sbjct: 628 LFQRLESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGI 672
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 2/197 (1%)
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV-NE 246
P + FN LV CK K VE+A E+ KM G+ PD +Y + + Q+ +R +E
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 247 VCREMKC-ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGL 305
V +M E +P+ T GI++ YC+ + + + F M+E + + +F++LING
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 306 GSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNS 365
D E K + TY+ V+ A+ + M+ A +V EM + GV P++
Sbjct: 306 VEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDA 365
Query: 366 RTYDIILQPDKGSKNPR 382
Y I+ + +K P+
Sbjct: 366 HAYSILAKGYVRAKEPK 382
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 3/185 (1%)
Query: 190 VSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCR 249
V KL++VL + +AQ +F + G P L SYT LL + Q+ ++ +
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 250 EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDK 309
E++ + D + + +INA+ ++ ++AV +M+E + P+ ++TLI G G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 310 RLDEALEFYEKFKANG---FAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSR 366
+ + + E + G P T+N +V A+C ++++A+ VV +M++CGV P++
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224
Query: 367 TYDII 371
TY+ I
Sbjct: 225 TYNTI 229
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 115/255 (45%), Gaps = 8/255 (3%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXK---VKEAVETFE 179
+F+ L++A K ++ + W +V+ M++ + DT K V+ E E
Sbjct: 190 TFNVLVQAWCKKKKVEEAWEVVKKMEECGVRP-DTVTYNTIATCYVQKGETVRAESEVVE 248
Query: 180 KM-EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
KM K KP +V C+ V +M+ + +L + L+ G+ +
Sbjct: 249 KMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEV 308
Query: 239 QNLLRVNEVCREMKCEC-FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ ++EV MK EC + DV+TY ++NA+ A ++A + EM + + P H
Sbjct: 309 MDRDGIDEVLTLMK-ECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHA 367
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
+S L G K +A E E P + V+ +C + MDDA RV ++M
Sbjct: 368 YSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMC 426
Query: 358 QCGVGPNSRTYDIIL 372
+ GV PN +T++ ++
Sbjct: 427 KFGVSPNIKTFETLM 441
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 101/207 (48%), Gaps = 7/207 (3%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V++ + +M++ ++ + FN L++ + + E+ M+ + D+ +Y+
Sbjct: 275 RVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYS 334
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ WS + + +V +EM +PD Y IL Y +AK+ +A E+ E
Sbjct: 335 TVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKA----EELLET 390
Query: 290 NMM---PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRM 346
++ P+ IF+T+I+G S+ +D+A+ + K G +P T+ ++ Y +
Sbjct: 391 LIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQP 450
Query: 347 DDAYRVVDEMKQCGVGPNSRTYDIILQ 373
A V+ M+ CGV P + T+ ++ +
Sbjct: 451 WKAEEVLQMMRGCGVKPENSTFLLLAE 477
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
++E+ G K + FN +++ +S ++E A + KM+ GL P +Y L++G+
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 240 NLLRVNEVCREMKCEC---FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPH 296
R +E+ M E P++ T+ +L+ A+CK KK +EA +M+E + P
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224
Query: 297 IFSTLIN-------GLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++T+ + ++ + E + EK K NG T VVG YC R+ D
Sbjct: 225 TYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNG-----RTCGIVVGGYCREGRVRDG 279
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
R V MK+ V N ++ ++
Sbjct: 280 LRFVRRMKEMRVEANLVVFNSLI 302
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 93/182 (51%), Gaps = 1/182 (0%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
E M++ +K +V ++ +++ + +EKA ++F +M G+ PD +Y+IL +G+
Sbjct: 316 EVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGY 375
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSP 295
+ + + E+ + E P+VV + +I+ +C D+A+ +++M + + P+
Sbjct: 376 VRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNI 434
Query: 296 HIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDE 355
F TL+ G K+ +A E + + G PE T+ + A+ + D++ + ++
Sbjct: 435 KTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINA 494
Query: 356 MK 357
+K
Sbjct: 495 LK 496
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 7/206 (3%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA F+ + + G +P + + L+ + K + ++ G D + ++
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM-QEKNM 291
+S+ N+ + +MK P TY LI Y A K + + M +E N+
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 292 MPSPHI--FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P+I F+ L+ K+++EA E +K + G P+T TYN + Y A
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA 242
Query: 350 YRVVDE---MKQCGVGPNSRTYDIIL 372
V E MK+ PN RT I++
Sbjct: 243 ESEVVEKMVMKE-KAKPNGRTCGIVV 267
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 124/284 (43%), Gaps = 18/284 (6%)
Query: 92 EVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRK 151
EV +++SN+GV A + +F ALI+ + Q + ++ +
Sbjct: 523 EVFHQMSNSGVEA---------------NLHTFGALIDGCARAGQVAKAFGAYGILRSKN 567
Query: 152 LL-TRDTXXXXXXXXXXXXKVKEAVETFEKM--EKYGLKPEVSDFNKLVDVLCKSKSVEK 208
+ R V A + +M E + + P+ L+ C + VE+
Sbjct: 568 VKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVER 627
Query: 209 AQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILIN 268
A+E++ + G+ + YTI + S+ + + ++MK + PD V + LI+
Sbjct: 628 AKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALID 687
Query: 269 AYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAP 328
AK DEA G + + + + +S+L+ + K +ALE YEK K+ P
Sbjct: 688 VAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRP 747
Query: 329 ETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
T NA++ A C ++ A +DE+K G+ PN+ TY +++
Sbjct: 748 TISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLM 791
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 111/239 (46%), Gaps = 4/239 (1%)
Query: 136 QFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNK 195
+ K +L+ED+ QR LL D K + AV+ + K L P +S FN
Sbjct: 415 RIKDCISLLEDLDQRDLL--DMDKIYHASFFKACKKQRAVKEAFRFTKLILNPTMSTFNM 472
Query: 196 LVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCEC 255
L+ V S+ +E A+ + ++ G+ D K YT L+ ++ + + EV +M
Sbjct: 473 LMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSG 532
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
E ++ T+G LI+ +A + +A G Y ++ KN+ P +F+ LI+ G +D A
Sbjct: 533 VEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAF 592
Query: 316 EFYEKFKANG--FAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+ + KA P+ + A++ A C + +++ A V + + G+ Y I +
Sbjct: 593 DVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAV 651
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 140/296 (47%), Gaps = 14/296 (4%)
Query: 78 LADLSVEVSPELVAEVLNKLSNAGVLALSFFHWA-EKQKGFKHSTESFHALIEALGKIRQ 136
+++ VE + +++ + AG +A +F + + K K F+ALI A G+
Sbjct: 528 MSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGA 587
Query: 137 FKVIWNLVEDMK-QRKLLTRD--TXXXXXXXXXXXXKVKEAVETFEKMEKYGLK--PEVS 191
++++ +MK + + D + +V+ A E ++ + KYG++ PEV
Sbjct: 588 VDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEV- 646
Query: 192 DFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREM 251
+ V+ KS + A ++ M+ + + PD ++ L++ + L + ++
Sbjct: 647 -YTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDA 705
Query: 252 KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRL 311
K + ++Y L+ A C AK + +A+ Y +++ + P+ + LI L +L
Sbjct: 706 KSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQL 765
Query: 312 DEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD---AYRVVDEMKQCGVGPN 364
+A+E+ ++ K G P T TY+ ++ A S R DD +++++ + K GV PN
Sbjct: 766 PKAMEYLDEIKTLGLKPNTITYSMLMLA---SERKDDFEVSFKLLSQAKGDGVSPN 818
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 150/385 (38%), Gaps = 88/385 (22%)
Query: 77 ALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQ 136
AL DLS++ S EL+ +L +L L F+ A KQ+ F+ +++ ++ L + R
Sbjct: 60 ALHDLSLDFSDELLNSILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARN 119
Query: 137 FK-----------------VIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFE 179
++ V+W + + + + VK A+ F+
Sbjct: 120 YQQTKSYLCELVALNHSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFD 179
Query: 180 KMEKYG-----------------------------------LKPEVSDFNKLVDVLCKSK 204
M YG + P+V + +V+ C+S
Sbjct: 180 NMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSG 239
Query: 205 SVEKAQ------------------------------------ELFDKMRHRGLVPDLKSY 228
+V+KA + M RG+ ++ +Y
Sbjct: 240 NVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTY 299
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
T L++G+ ++ + V +K + D YG+L++ YC+ + +AV + M E
Sbjct: 300 TSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIE 359
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
+ + I ++LING +L EA + + + P+ TYN +V YC + +D+
Sbjct: 360 IGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDE 419
Query: 349 AYRVVDEMKQCGVGPNSRTYDIILQ 373
A ++ D+M Q V P TY+I+L+
Sbjct: 420 ALKLCDQMCQKEVVPTVMTYNILLK 444
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 122/256 (47%), Gaps = 1/256 (0%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLT-RDTXXXXXXXXXXXXKVK 172
++G + ++ +LI+ K + ++ E +K++KL+ + +++
Sbjct: 289 ERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIR 348
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+AV + M + G++ + N L++ CKS + +A+++F +M L PD +Y L+
Sbjct: 349 DAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLV 408
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+G+ + + ++C +M + P V+TY IL+ Y + + + + + M ++ +
Sbjct: 409 DGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVN 468
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
STL+ L +EA++ +E A G +T T N ++ C ++++A +
Sbjct: 469 ADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEI 528
Query: 353 VDEMKQCGVGPNSRTY 368
+D + P +TY
Sbjct: 529 LDNVNIFRCKPAVQTY 544
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 108/262 (41%), Gaps = 70/262 (26%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA + F +M + LKP+ +N LVD C++ V++A +L D+M + +VP + +Y ILL
Sbjct: 384 EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL 443
Query: 233 EGWSQ-----------------------------QQNLLRVNEVCREMK------CECFE 257
+G+S+ + L ++ + MK
Sbjct: 444 KGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL 503
Query: 258 PDVVTYGILINAYCKAKKYDEAV-----------------------GFY----------- 283
D +T ++I+ CK +K +EA G+Y
Sbjct: 504 TDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAV 563
Query: 284 -HEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
M+ K + P+ +++TLI+G + L++ + + +A G P TY A++ +C
Sbjct: 564 KEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCN 623
Query: 343 SMRMDDAYRVVDEMKQCGVGPN 364
+D AY EM + G+ N
Sbjct: 624 IGMIDKAYATCFEMIEKGITLN 645
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 1/209 (0%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVK 172
++G S L+EAL K+ F L E++ R LLT T KV
Sbjct: 464 KRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVN 523
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA E + + + KP V + L K ++++A + + M +G+ P ++ Y L+
Sbjct: 524 EAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLI 583
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G + ++L +V ++ E++ P V TYG LI +C D+A EM EK +
Sbjct: 584 SGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGIT 643
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKF 321
+ +I S + N L ++DEA +K
Sbjct: 644 LNVNICSKIANSLFRLDKIDEACLLLQKI 672
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 94/207 (45%), Gaps = 6/207 (2%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V+ M + G+ V + L+ CK +E+A+ +F+ ++ + LV D Y +
Sbjct: 277 VEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGV 336
Query: 231 LLEGW---SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
L++G+ Q ++ +RV++ E+ + LIN YCK+ + EA + M
Sbjct: 337 LMDGYCRTGQIRDAVRVHDNMIEIG---VRTNTTICNSLINGYCKSGQLVEAEQIFSRMN 393
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
+ ++ P H ++TL++G +DEAL+ ++ P TYN ++ Y
Sbjct: 394 DWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFH 453
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILQP 374
D + M + GV + + +L+
Sbjct: 454 DVLSLWKMMLKRGVNADEISCSTLLEA 480
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 3/159 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELF-DKMRHRGLVPDLKSY 228
K+ E+VE K L P +N + LCK+ +E A++LF D + +PD +Y
Sbjct: 701 KIAESVEN--STPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTY 758
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
TIL+ G + ++ + + EM + P++VTY LI CK D A H++ +
Sbjct: 759 TILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQ 818
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFA 327
K + P+ ++TLI+GL + EA+ EK G
Sbjct: 819 KGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 122/315 (38%), Gaps = 42/315 (13%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKV 171
++KG + E ++ LI K R + +LV +++ R L T T +
Sbjct: 568 ERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMI 627
Query: 172 KEAVET-FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMR------------- 217
+A T FE +EK G+ V+ +K+ + L + +++A L K+
Sbjct: 628 DKAYATCFEMIEK-GITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLK 686
Query: 218 -------------------------HRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREM- 251
+ LVP+ Y + + G + L ++ ++
Sbjct: 687 EFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLL 746
Query: 252 KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRL 311
+ F PD TY ILI+ A ++A EM K ++P+ ++ LI GL +
Sbjct: 747 SSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNV 806
Query: 312 DEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDII 371
D A K G P TYN ++ S + +A R+ ++M + G+ S +
Sbjct: 807 DRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRGSDKQGDV 866
Query: 372 LQPDKGSKNPRSLLG 386
P + +P LG
Sbjct: 867 DIPKEVVLDPEVKLG 881
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 117/259 (45%), Gaps = 10/259 (3%)
Query: 120 STESFHALIEALGK---IRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVE 176
S+E + A I+A G+ + + + ++ +++ +R ++ + K A E
Sbjct: 470 SSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEK---ACE 526
Query: 177 TFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWS 236
FE M YG+ P+ +N LV +L + K + +KMR G V D Y ++ +
Sbjct: 527 LFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFV 586
Query: 237 QQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPH 296
+ L EV +EM EPDVV YG+LINA+ +A+ + M+E + +
Sbjct: 587 KLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSV 646
Query: 297 IFSTLINGLGSDKRLDEALEFYEKFKANGFAPETP---TYNAVVGAYCWSMRMDDAYRVV 353
I+++LI LDEA Y K + + P T N ++ Y + A +
Sbjct: 647 IYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIF 706
Query: 354 DEMKQCGVGPNSRTYDIIL 372
D MKQ G N T+ ++L
Sbjct: 707 DSMKQRG-EANEFTFAMML 724
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 111/209 (53%), Gaps = 14/209 (6%)
Query: 174 AVETFEKMEKYGL-KPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
AVE FE + G + V +N ++ +L K+ Q L+D+M +G+ P +Y L+
Sbjct: 170 AVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLI 229
Query: 233 EGWSQQQNLLRVNEVC--REMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ--- 287
+ +S+ L+V+ +C +M +PD VT GI++ Y KA+++ +A F+ +
Sbjct: 230 DVYSKGG--LKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDE 287
Query: 288 ---EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSM 344
+ ++ S + ++T+I+ G ++ EA E +++ G P T T+N ++ Y +
Sbjct: 288 NKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNG 347
Query: 345 RMDDAYRVVDEMK-QCGVGPNSRTYDIIL 372
++ + ++ MK C P++RTY+I++
Sbjct: 348 QLGEVTSLMKTMKLHC--APDTRTYNILI 374
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 98/201 (48%), Gaps = 7/201 (3%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
+++M + G+KP S + L+DV K A KM G+ PD + I+L+ + +
Sbjct: 210 WDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKK 269
Query: 238 QQNLLRVNEVCREMKCECFEPDV------VTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+ + E ++ C+ + D TY +I+ Y K+ + EA + M E+ +
Sbjct: 270 AREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGI 329
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
+P+ F+T+I+ G++ +L E + K + AP+T TYN ++ + + ++ A
Sbjct: 330 VPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CAPDTRTYNILISLHTKNNDIERAGA 388
Query: 352 VVDEMKQCGVGPNSRTYDIIL 372
EMK G+ P+ +Y +L
Sbjct: 389 YFKEMKDDGLKPDPVSYRTLL 409
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 103/237 (43%), Gaps = 34/237 (14%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++KEA ETF++M + G+ P FN ++ + + + + L M+ PD ++Y
Sbjct: 313 QIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CAPDTRTYN 371
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL+ ++ ++ R +EMK + +PD V+Y L+ A+ +EA G EM +
Sbjct: 372 ILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDD 431
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKF-----------KAN-------GFAPETP 331
N+ + S L + L+++ ++++F AN G+ E
Sbjct: 432 NVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAE 491
Query: 332 T---------------YNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
YN ++ AY S + A + + M GV P+ TY+ ++Q
Sbjct: 492 RVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQ 548
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Query: 193 FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK 252
+N ++D KS +++A E F +M G+VP ++ ++ + L V + + MK
Sbjct: 301 YNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK 360
Query: 253 CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD 312
C PD TY ILI+ + K + A ++ EM++ + P P + TL+ ++
Sbjct: 361 LHC-APDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVE 419
Query: 313 EA 314
EA
Sbjct: 420 EA 421
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/192 (19%), Positives = 99/192 (51%), Gaps = 6/192 (3%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMR---HRGLVPDLKS 227
V++A+ E M++ G+ +N L+ + K +++A+ ++ K+ ++ PD+ +
Sbjct: 626 VQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYT 685
Query: 228 YTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
++ +S++ + + + MK + E + T+ +++ Y K +++EA +M+
Sbjct: 686 SNCMINLYSERSMVRKAEAIFDSMK-QRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMR 744
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
E ++ P +++++ D R EA+E +++ ++G P+ T+ + +G + M
Sbjct: 745 EMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKS-LGTILMKLGMS 803
Query: 348 -DAYRVVDEMKQ 358
A R ++E+++
Sbjct: 804 KKAVRKIEEIRK 815
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/309 (18%), Positives = 118/309 (38%), Gaps = 33/309 (10%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKE 173
++G +T +F+ +I G Q + +L++ MK T ++
Sbjct: 326 EEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIER 385
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A F++M+ GLKP+ + L+ VE+A+ L +M + D + + L
Sbjct: 386 AGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTR 445
Query: 234 GWSQQQNL------LRVNEVCREMKCECFEPDVVTYG----------------------- 264
+ + + L + V M E + ++ YG
Sbjct: 446 MYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTV 505
Query: 265 ----ILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEK 320
++I AY +K ++A + M + P ++TL+ L S + + EK
Sbjct: 506 IEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEK 565
Query: 321 FKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQPDKGSKN 380
+ G+ + Y AV+ ++ +++ A V EM + + P+ Y +++ + N
Sbjct: 566 MRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGN 625
Query: 381 PRSLLGFPE 389
+ + + E
Sbjct: 626 VQQAMSYVE 634
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 3/185 (1%)
Query: 190 VSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCR 249
V KL++VL + +AQ +F + G P L SYT LL + Q+ ++ +
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 250 EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDK 309
E++ + D + + +INA+ ++ ++AV +M+E + P+ ++TLI G G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 310 RLDEALEFYEKFKANG---FAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSR 366
+ + + E + G P T+N +V A+C ++++A+ VV +M++CGV P++
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224
Query: 367 TYDII 371
TY+ I
Sbjct: 225 TYNTI 229
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 103/222 (46%), Gaps = 27/222 (12%)
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV-NE 246
P + FN LV CK K VE+A E+ KM G+ PD +Y + + Q+ +R +E
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 247 VCREMKC-ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGL 305
V +M E +P+ T GI++ YC+ + + + F M+E + + +F++LING
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 306 -------GSDK--------RLDEALEFY--EKFKAN--------GFAPETPTYNAVVGAY 340
G D+ +E +E +K K + TY+ V+ A+
Sbjct: 306 VEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAW 365
Query: 341 CWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQPDKGSKNPR 382
+ M+ A +V EM + GV P++ Y I+ + +K P+
Sbjct: 366 SSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPK 407
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 95/186 (51%), Gaps = 1/186 (0%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
K V+ M++ +K +V ++ +++ + +EKA ++F +M G+ PD +Y+IL
Sbjct: 337 KMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSIL 396
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+G+ + + + E+ + E P+VV + +I+ +C D+A+ +++M + +
Sbjct: 397 AKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGV 455
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P+ F TL+ G K+ +A E + + G PE T+ + A+ + D++ +
Sbjct: 456 SPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNK 515
Query: 352 VVDEMK 357
++ +K
Sbjct: 516 AINALK 521
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 91/185 (49%), Gaps = 10/185 (5%)
Query: 192 DFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREM 251
FN+ V+++ K K Q + M+ + D+ +Y+ ++ WS + + +V +EM
Sbjct: 325 SFNEEVELVGNQKM--KVQ-VLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEM 381
Query: 252 KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM---PSPHIFSTLINGLGSD 308
+PD Y IL Y +AK+ +A E+ E ++ P+ IF+T+I+G S+
Sbjct: 382 VKAGVKPDAHAYSILAKGYVRAKEPKKA----EELLETLIVESRPNVVIFTTVISGWCSN 437
Query: 309 KRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
+D+A+ + K G +P T+ ++ Y + A V+ M+ CGV P + T+
Sbjct: 438 GSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF 497
Query: 369 DIILQ 373
++ +
Sbjct: 498 LLLAE 502
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 104/217 (47%), Gaps = 6/217 (2%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ A ME+ G++P + +N +++ LC + V +A E+ +G+V D+ +Y+
Sbjct: 363 LNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYST 417
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
LL+ + + QN+ V E+ R D+V IL+ A+ Y EA Y M E +
Sbjct: 418 LLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMD 477
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ P ++T+I G +++EALE + + + + + YN ++ A C +D A
Sbjct: 478 LTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALCKKGMLDTAT 536
Query: 351 RVVDEMKQCGVGPNSRTYDIILQPDKGSKNPRSLLGF 387
V+ E+ + G+ + T +L + + +LG
Sbjct: 537 EVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGL 573
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 97/201 (48%), Gaps = 1/201 (0%)
Query: 174 AVETFEKMEKYG-LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
A+ FE G L P + + LV LC+ V++ ++L ++ G D Y+ +
Sbjct: 190 ALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWI 249
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G+ + L+ REM + DVV+Y ILI+ K +EA+G +M ++ +
Sbjct: 250 HGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVE 309
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+ ++ +I GL +L+EA + + + G + Y ++ C ++ A+ +
Sbjct: 310 PNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSM 369
Query: 353 VDEMKQCGVGPNSRTYDIILQ 373
+ +M+Q G+ P+ TY+ ++
Sbjct: 370 LGDMEQRGIQPSILTYNTVIN 390
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 101/216 (46%), Gaps = 5/216 (2%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV E + ++E G + + ++ + K ++ A +M +G+ D+ SY+
Sbjct: 222 KVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYS 281
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
IL++G S++ N+ + +M E EP+++TY +I CK K +EA ++ +
Sbjct: 282 ILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSV 341
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ ++ TLI+G+ L+ A + G P TYN V+ C + R+ +A
Sbjct: 342 GIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA 401
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQPDKGSKNPRSLL 385
DE+ + GV + TY +L +N ++L
Sbjct: 402 ----DEVSK-GVVGDVITYSTLLDSYIKVQNIDAVL 432
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 83/172 (48%)
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
G+ +N L++ LC+ + +A LFD + + GLVP +Y IL++ ++ L
Sbjct: 685 GVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDA 744
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLING 304
++ M + P+++ Y +++ YCK + ++A+ + P S++I G
Sbjct: 745 EKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKG 804
Query: 305 LGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM 356
++EAL + +FK + + + ++ +C RM++A ++ EM
Sbjct: 805 YCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREM 856
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 39/223 (17%)
Query: 184 YGLKPEVSD-----FNKLVDVLCKSKSVEKAQELFDKMRHRG------------LVPDLK 226
YGL+ SD N + +LCK S E A E++ MR +G LV +L+
Sbjct: 575 YGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLR 634
Query: 227 S----------------------YTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYG 264
S YTI++ G ++ L++ +C K + +TY
Sbjct: 635 SLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYN 694
Query: 265 ILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKAN 324
LIN C+ EA+ + ++ ++PS + LI+ L + +A + + +
Sbjct: 695 SLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSK 754
Query: 325 GFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
G P YN++V YC + +DA RVV V P++ T
Sbjct: 755 GLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFT 797
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 81/169 (47%)
Query: 189 EVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVC 248
+V D+ +++ LCK + KA L + RG+ + +Y L+ G QQ L+ +
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 249 REMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSD 308
++ P VTYGILI+ CK + +A M K ++P+ I++++++G
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 309 KRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
+ ++A+ + P+ T ++++ YC M++A V E K
Sbjct: 774 GQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFK 822
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 83/197 (42%), Gaps = 4/197 (2%)
Query: 93 VLNKLSNAGVL--ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR 150
++N L G L AL+ +A K +G +T ++++LI L + L + ++
Sbjct: 661 IINGLCKEGFLVKALNLCSFA-KSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENI 719
Query: 151 KLL-TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKA 209
L+ + T +A + + M GL P + +N +VD CK E A
Sbjct: 720 GLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDA 779
Query: 210 QELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINA 269
+ + + PD + + +++G+ ++ ++ V E K + D + LI
Sbjct: 780 MRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKG 839
Query: 270 YCKAKKYDEAVGFYHEM 286
+C + +EA G EM
Sbjct: 840 FCTKGRMEEARGLLREM 856
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 93/199 (46%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A E F M+ G +P+ + +N +VD ++ A+ +F++M+ G+ P +KS+ +LL
Sbjct: 353 AAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLS 412
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+S+ +++ + + +EM EPD ++N Y + ++ + EM+
Sbjct: 413 AYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTA 472
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
++ LIN G L+ E + + K F P+ T+ + +GAY V
Sbjct: 473 DISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVF 532
Query: 354 DEMKQCGVGPNSRTYDIIL 372
+EM G P+ T ++L
Sbjct: 533 EEMIDSGCAPDGGTAKVLL 551
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 93/193 (48%)
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
+M + KP + + LV+ + EKA+E+F++++ GL PD+ Y L+E +S+
Sbjct: 289 EMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG 348
Query: 240 NLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
E+ M+ EPD +Y I+++AY +A + +A + EM+ + P+
Sbjct: 349 YPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHM 408
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQC 359
L++ + + + ++ NG P+T N+++ Y + +++ EM+
Sbjct: 409 LLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENG 468
Query: 360 GVGPNSRTYDIIL 372
+ TY+I++
Sbjct: 469 PCTADISTYNILI 481
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 155/365 (42%), Gaps = 49/365 (13%)
Query: 48 RIHTLIPHTPHADKICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSF 107
+I + I DK+ +L P++ A+ DL + VS +L LNK ++ +L
Sbjct: 91 KILSFIQKETDPDKVADVLGALPST--HASWDDL-INVSVQLR---LNKKWDSIILVC-- 142
Query: 108 FHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNL-VEDMKQRKLLTRDTXXXXXXXXX 166
W ++ F+ F+ LI+A G+ Q+K +L V+ ++ R + T DT
Sbjct: 143 -EWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYC 201
Query: 167 XXXKVK---------------------------------------EAVETFEKMEKYGLK 187
++ EA++ F++M++ K
Sbjct: 202 MAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCK 261
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEV 247
P +N ++++ K+ + +L+ +MR P++ +YT L+ ++++ + E+
Sbjct: 262 PTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEI 321
Query: 248 CREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGS 307
+++ + EPDV Y L+ +Y +A A + MQ P ++ +++ G
Sbjct: 322 FEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 381
Query: 308 DKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
+A +E+ K G AP ++ ++ AY + + +V EM + GV P++
Sbjct: 382 AGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFV 441
Query: 368 YDIIL 372
+ +L
Sbjct: 442 LNSML 446
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 89/197 (45%), Gaps = 4/197 (2%)
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
+ K +P+V FN L+D + ++A+ L+ ++ VP +Y +L++ +
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 241 LLRVNEVCREMKCECFEP---DVVTYGILINAYCKAK-KYDEAVGFYHEMQEKNMMPSPH 296
+ R V EM+ P V Y I K K +EA+ + M+ P+
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 297 IFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM 356
++ +IN G + + + Y + +++ P TY A+V A+ + A + +++
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 325
Query: 357 KQCGVGPNSRTYDIILQ 373
++ G+ P+ Y+ +++
Sbjct: 326 QEDGLEPDVYVYNALME 342
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 90/193 (46%), Gaps = 1/193 (0%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKM 181
S++ +++A G+ + E+MK+ + T + V + ++M
Sbjct: 371 SYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM 430
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
+ G++P+ N ++++ + K +++ +M + D+ +Y IL+ + + L
Sbjct: 431 SENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFL 490
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
R+ E+ E+K + F PDVVT+ I AY + K Y + + + EM + P L
Sbjct: 491 ERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVL 550
Query: 302 INGLGSDKRLDEA 314
++ S++++++
Sbjct: 551 LSACSSEEQVEQV 563
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 93/199 (46%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A E F M+ G +P+ + +N +VD ++ A+ +F++M+ G+ P +KS+ +LL
Sbjct: 375 AAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLS 434
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+S+ +++ + + +EM EPD ++N Y + ++ + EM+
Sbjct: 435 AYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTA 494
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
++ LIN G L+ E + + K F P+ T+ + +GAY V
Sbjct: 495 DISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVF 554
Query: 354 DEMKQCGVGPNSRTYDIIL 372
+EM G P+ T ++L
Sbjct: 555 EEMIDSGCAPDGGTAKVLL 573
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 93/193 (48%)
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
+M + KP + + LV+ + EKA+E+F++++ GL PD+ Y L+E +S+
Sbjct: 311 EMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG 370
Query: 240 NLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
E+ M+ EPD +Y I+++AY +A + +A + EM+ + P+
Sbjct: 371 YPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHM 430
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQC 359
L++ + + + ++ NG P+T N+++ Y + +++ EM+
Sbjct: 431 LLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENG 490
Query: 360 GVGPNSRTYDIIL 372
+ TY+I++
Sbjct: 491 PCTADISTYNILI 503
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 155/365 (42%), Gaps = 49/365 (13%)
Query: 48 RIHTLIPHTPHADKICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSF 107
+I + I DK+ +L P++ A+ DL + VS +L LNK ++ +L
Sbjct: 113 KILSFIQKETDPDKVADVLGALPST--HASWDDL-INVSVQLR---LNKKWDSIILVC-- 164
Query: 108 FHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNL-VEDMKQRKLLTRDTXXXXXXXXX 166
W ++ F+ F+ LI+A G+ Q+K +L V+ ++ R + T DT
Sbjct: 165 -EWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYC 223
Query: 167 XXXKVK---------------------------------------EAVETFEKMEKYGLK 187
++ EA++ F++M++ K
Sbjct: 224 MAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCK 283
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEV 247
P +N ++++ K+ + +L+ +MR P++ +YT L+ ++++ + E+
Sbjct: 284 PTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEI 343
Query: 248 CREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGS 307
+++ + EPDV Y L+ +Y +A A + MQ P ++ +++ G
Sbjct: 344 FEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 403
Query: 308 DKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
+A +E+ K G AP ++ ++ AY + + +V EM + GV P++
Sbjct: 404 AGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFV 463
Query: 368 YDIIL 372
+ +L
Sbjct: 464 LNSML 468
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 89/197 (45%), Gaps = 4/197 (2%)
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
+ K +P+V FN L+D + ++A+ L+ ++ VP +Y +L++ +
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 241 LLRVNEVCREMKCECFEP---DVVTYGILINAYCKAK-KYDEAVGFYHEMQEKNMMPSPH 296
+ R V EM+ P V Y I K K +EA+ + M+ P+
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 297 IFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM 356
++ +IN G + + + Y + +++ P TY A+V A+ + A + +++
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 347
Query: 357 KQCGVGPNSRTYDIILQ 373
++ G+ P+ Y+ +++
Sbjct: 348 QEDGLEPDVYVYNALME 364
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 90/193 (46%), Gaps = 1/193 (0%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKM 181
S++ +++A G+ + E+MK+ + T + V + ++M
Sbjct: 393 SYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM 452
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
+ G++P+ N ++++ + K +++ +M + D+ +Y IL+ + + L
Sbjct: 453 SENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFL 512
Query: 242 LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
R+ E+ E+K + F PDVVT+ I AY + K Y + + + EM + P L
Sbjct: 513 ERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVL 572
Query: 302 INGLGSDKRLDEA 314
++ S++++++
Sbjct: 573 LSACSSEEQVEQV 585
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 118/249 (47%), Gaps = 6/249 (2%)
Query: 128 IEALGKIRQFKVIWNLVEDMKQR-KLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGL 186
+ L K R+F I L+E K K+ A+ TFE+M++YG
Sbjct: 74 VRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGT 133
Query: 187 KPEVSDFNKLVDVLCKSKSVEKAQELFDKM--RHRGLVPDLKSYTILLEGWSQQQNLLRV 244
FN L++ SK+ +K +LFD++ R+ ++PD SY IL++ + +
Sbjct: 134 PRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKA 193
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLING 304
E+ R+M+ + E + + ++++ K + + A ++EM +K ++ I
Sbjct: 194 IEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRI-- 251
Query: 305 LGSDKRLDEAL-EFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGP 363
+ + K E + E E+ + G P+T +YN ++ AYC +D+A +V + ++ P
Sbjct: 252 MSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAP 311
Query: 364 NSRTYDIIL 372
N+ T+ ++
Sbjct: 312 NAATFRTLI 320
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 113/251 (45%), Gaps = 10/251 (3%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR--KLLTRDTXXXXXXXXXXXXKV 171
Q G S SF+AL+ A + F + L +++ QR K++
Sbjct: 130 QYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGT 189
Query: 172 KE-AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
E A+E +M+ G++ F ++ L K +E A L+++M +G D +Y +
Sbjct: 190 PEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNV 249
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+ +Q+++ RV E+ EM +PD ++Y L+ AYC+ DEA Y ++ N
Sbjct: 250 RIMS-AQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNN 308
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNA---VVGAYCWSMRMD 347
P+ F TLI L + ++ Y FK + + + P +N +V + + D
Sbjct: 309 CAPNAATFRTLIFHLCYSRLYEQG---YAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRD 365
Query: 348 DAYRVVDEMKQ 358
DA ++ +K+
Sbjct: 366 DAKGLIRTVKK 376
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 133/290 (45%), Gaps = 10/290 (3%)
Query: 85 VSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLV 144
++P V ++ + + + L ++ H++ K+K ++ TES +AL+ + K Q K+ +
Sbjct: 60 LAPNEVLKIFDNVKDPSFLLPAYQHYS-KRKDYQ-PTESLYALM--INKFGQAKMYDEIE 115
Query: 145 EDMKQRKLLTRDTXX------XXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVD 198
E M+ KL R ++ A+E M +G P FN +++
Sbjct: 116 EVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILN 175
Query: 199 VLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEP 258
+L +K ++ ++F G+ D IL++G + NL ++ E + P
Sbjct: 176 LLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRP 235
Query: 259 DVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFY 318
+V+T+ LI +C K++EA M+++ + P F+ LI+GL R++E ++
Sbjct: 236 NVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLL 295
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
E+ K G P TY V+ R +A ++ +M G+ P+ +Y
Sbjct: 296 ERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSY 345
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 94/201 (46%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
E + F K G++ + N L+ LC+S ++E A +L D+ + P++ +++ L+
Sbjct: 185 EIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLI 244
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G+ + ++ M+ E EPD +T+ ILI+ K + +E + M+ K
Sbjct: 245 RGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCE 304
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P+P + ++ GL KR EA E + + G P +Y +V C + + + V
Sbjct: 305 PNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWV 364
Query: 353 VDEMKQCGVGPNSRTYDIILQ 373
+ +M G P + + ++Q
Sbjct: 365 LRQMVNHGFVPKTLMWWKVVQ 385
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 1/189 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
++ A++ ++ + +P V F+ L+ C E+A +L ++M + PD ++ I
Sbjct: 218 LEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNI 277
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L+ G ++ + ++ MK + EP+ TY ++ K+ EA +M
Sbjct: 278 LISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWG 337
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
M PS + ++ GL K + E + +GF P+T + VV S DD+
Sbjct: 338 MRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVV-SKNNDDSQ 396
Query: 351 RVVDEMKQC 359
+D + C
Sbjct: 397 ANLDRITAC 405
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 63/133 (47%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K +EA + E+MEK ++P+ FN L+ L K VE+ +L ++M+ +G P+ +Y
Sbjct: 252 KFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQ 311
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L G ++ L E+ +M P ++Y ++ C+ K E +M
Sbjct: 312 EVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNH 371
Query: 290 NMMPSPHIFSTLI 302
+P ++ ++
Sbjct: 372 GFVPKTLMWWKVV 384
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 99/203 (48%), Gaps = 17/203 (8%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+++A + +KM Y ++P S K++ CK +V +AQ LFD M RGL+PDL +YTI
Sbjct: 572 LEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTI 631
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAK-KYDEAVGFYHEMQEK 289
++ + + L + + +MK +PDVVTY +L++ Y K ++ E E+ ++
Sbjct: 632 MIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKR 691
Query: 290 NMMPSPHIFSTLINGLGSD--------------KRLDEALEFYEKFKANGFAPETPTYNA 335
FS G+G D L++A E +++ +G P+ Y
Sbjct: 692 KASEVLREFSA--AGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTT 749
Query: 336 VVGAYCWSMRMDDAYRVVDEMKQ 358
++ +Y +D A +V E+ +
Sbjct: 750 LISSYFRKGYIDMAVTLVTELSK 772
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA+ +KM GLK + ++ CK +A E F + R + D Y +
Sbjct: 336 EALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAF 395
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ S+ + E+ +EMK PDV+ Y LI+ YC K +A+ EM M
Sbjct: 396 DALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMS 455
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P ++ L++GL + +E LE YE+ KA G P T + ++ C++ ++ +A
Sbjct: 456 PDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDF 515
Query: 353 VDEMKQ 358
++Q
Sbjct: 516 FSSLEQ 521
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 107/237 (45%), Gaps = 38/237 (16%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V+EA E ++M+ G+ P+V ++ L+D C V A +L D+M G+ PDL +Y
Sbjct: 403 RVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYN 462
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L+ G ++ + V E+ MK E +P+ VT ++I C A+K EA F+ +++K
Sbjct: 463 VLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK 522
Query: 290 N------------------------------MMPSPHI---FSTLINGLGSDKRLDEALE 316
+ S +I FS I G L++A +
Sbjct: 523 CPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGY-----LEKAHD 577
Query: 317 FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+K A P ++GA+C + +A + D M + G+ P+ TY I++
Sbjct: 578 VLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIH 634
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 100/204 (49%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+K A +ME+ G +V ++D CK+ ++ +A DKM +GL + +
Sbjct: 298 KMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVS 357
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++L+ + + L E +E + D V Y + +A K + +EA EM+++
Sbjct: 358 LILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDR 417
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
++P ++TLI+G ++ +AL+ ++ NG +P+ TYN +V + ++
Sbjct: 418 GIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEV 477
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
+ + MK G PN+ T +I++
Sbjct: 478 LEIYERMKAEGPKPNAVTNSVIIE 501
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 91/221 (41%), Gaps = 38/221 (17%)
Query: 190 VSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVP--DLKSYT-ILLEGWSQQQNLLRVNE 246
V + ++ LC + EKA L ++ R + DL++ +++ G+ + +
Sbjct: 245 VFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAES 304
Query: 247 VCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLI---- 302
V EM+ F DV +I+ YCK EA+GF +M K + + I S ++
Sbjct: 305 VIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYC 364
Query: 303 -------------------------------NGLGSDKRLDEALEFYEKFKANGFAPETP 331
+ L R++EA E ++ K G P+
Sbjct: 365 KMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVI 424
Query: 332 TYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
Y ++ YC ++ DA ++DEM G+ P+ TY++++
Sbjct: 425 NYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLV 465
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 48/172 (27%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V+EA F+ M + GL P++ + ++ C+ ++KA+ LF+ M+ RG+ PD+ +YT+
Sbjct: 607 VREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTV 666
Query: 231 LLE-------------------GWSQQQNLLR-----------------VNEVCR----E 250
LL+ G + +LR ++ C+ E
Sbjct: 667 LLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLE 726
Query: 251 MKCECF--------EPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
E F EPD+V Y LI++Y + D AV E+ +K +PS
Sbjct: 727 QAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPS 778
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 151/355 (42%), Gaps = 45/355 (12%)
Query: 25 PASLTPLSTSPTIKLPQNLSGSLRIHTLIPHTPHADKICKILSKSPNSTIDAALADLSVE 84
P SL SP+++ + +LR T + A+++ L + S ++ LA +V+
Sbjct: 2 PNSLISRLVSPSLRSQPSKISALRFLTTVSA---AERLYGQL-QGCTSNLEKELASANVQ 57
Query: 85 VSPELVAEVLNKLS-NAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNL 143
+ + EVL + N L FF WA +HS + + L KIR
Sbjct: 58 LDSSCINEVLRRCDPNQFQSGLRFFIWAGTLSSHRHSAYMYTKACDIL-KIR-------- 108
Query: 144 VEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKS 203
+K +E++ K E + V ++V LC
Sbjct: 109 ----------------------AKPDLIKYVIESYRKEECF---VNVKTM-RIVLTLCNQ 142
Query: 204 KSV-EKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVT 262
++ ++A + K + D +Y +++ ++ + +L + + +EM C PDV+T
Sbjct: 143 ANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVIT 202
Query: 263 YGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFY---E 319
Y +IN YC A K D+A EM + + + + +S ++ G+ ++ ALE E
Sbjct: 203 YTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEME 262
Query: 320 KFKANGF-APETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
K G +P TY V+ A+C R+++A V+D M G PN T +++Q
Sbjct: 263 KEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQ 317
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 91/192 (47%), Gaps = 5/192 (2%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
++M+ GL P+V + +++ C + ++ A L +M V + +Y+ +LEG +
Sbjct: 188 IKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCK 247
Query: 238 QQNLLRVNEVCREMKCE----CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
++ R E+ EM+ E P+ VTY ++I A+C+ ++ +EA+ M + MP
Sbjct: 248 SGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMP 307
Query: 294 SPHIFSTLING-LGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
+ LI G L +D+ + + +K G + +++ + R ++A ++
Sbjct: 308 NRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKI 367
Query: 353 VDEMKQCGVGPN 364
M GV P+
Sbjct: 368 FRLMLVRGVRPD 379
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 119/272 (43%), Gaps = 30/272 (11%)
Query: 105 LSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXX 164
+ F+WA F+H +SF + +L +F ++ L+ +
Sbjct: 97 FAVFNWAATLDTFRHDHDSFLWMSRSLAATHRFDDLYRLLSFVAANPC------------ 144
Query: 165 XXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV-- 222
+ + ++E F +D C+++ ++ A FD M+ L+
Sbjct: 145 -----PCSSGIFSCPELEPI--------FRSAIDAYCRARKMDYALLAFDTMKR--LIDG 189
Query: 223 -PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVG 281
P++ Y ++ G+ + ++ + + M E +PDV T+ ILIN YC++ K+D A+
Sbjct: 190 KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALD 249
Query: 282 FYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
+ EM+EK P+ F+TLI G S +++E ++ + G T +V C
Sbjct: 250 LFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLC 309
Query: 342 WSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
R+DDA +V ++ V P+ Y +++
Sbjct: 310 REGRVDDACGLVLDLLNKRVLPSEFDYGSLVE 341
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 102/206 (49%), Gaps = 6/206 (2%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ +A+ +++M K KP+V FN L++ C+S + A +LF +M+ +G P++ S+
Sbjct: 209 MDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNT 268
Query: 231 LLEGWSQQQNLLRVNEVCREM---KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
L+ G+ + ++ EM C E T IL++ C+ + D+A G ++
Sbjct: 269 LIRGFLSSGKIEEGVKMAYEMIELGCRFSE---ATCEILVDGLCREGRVDDACGLVLDLL 325
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
K ++PS + +L+ L + + A+E E+ G P +V S R +
Sbjct: 326 NKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTE 385
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILQ 373
A +++M G+ P+S T++++L+
Sbjct: 386 KASGFMEKMMNAGILPDSVTFNLLLR 411
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 126/287 (43%), Gaps = 10/287 (3%)
Query: 93 VLNKLSNAGVL--ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR 150
V+N +G + AL F+ K++ K +F+ LI + +F + +L +MK++
Sbjct: 199 VVNGYVKSGDMDKALRFYQRMGKERA-KPDVCTFNILINGYCRSSKFDLALDLFREMKEK 257
Query: 151 ----KLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSV 206
+++ +T K++E V+ +M + G + + LVD LC+ V
Sbjct: 258 GCEPNVVSFNTLIRGFLSSG---KIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRV 314
Query: 207 EKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGIL 266
+ A L + ++ ++P Y L+E + +R E+ E+ + P + L
Sbjct: 315 DDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTL 374
Query: 267 INAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGF 326
+ K+ + ++A GF +M ++P F+ L+ L S +A + G+
Sbjct: 375 VEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGY 434
Query: 327 APETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
P+ TY+ +V + R + +V+EM + P+ TY+ ++
Sbjct: 435 EPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMD 481
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 1/191 (0%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEA 174
G + S + L++ L + + LV D+ +++L + K A
Sbjct: 293 GCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRA 352
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
+E E++ K G P LV+ L KS EKA +KM + G++PD ++ +LL
Sbjct: 353 MEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRD 412
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
+ N + + +EPD TY +L++ + K + E +EM +K+M+P
Sbjct: 413 LCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPD 472
Query: 295 PHIFSTLINGL 305
++ L++GL
Sbjct: 473 IFTYNRLMDGL 483
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 95/190 (50%), Gaps = 5/190 (2%)
Query: 183 KYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLL 242
+ G+KP F+ ++ LC+ ++V+ A+ L M +G P + +++ S+ +L
Sbjct: 369 RRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLD 424
Query: 243 RVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLI 302
EV + M+ +PDV TY ++I+ Y K DEA E ++K+ SP + LI
Sbjct: 425 EAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALI 484
Query: 303 NGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW-SMRMDDAYRVVDEMKQCGV 361
G + DEAL+ + G P YN ++ ++C ++ + A + +EMKQ G+
Sbjct: 485 RGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGL 544
Query: 362 GPNSRTYDII 371
N+ + +I
Sbjct: 545 HLNAISQGLI 554
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 80/158 (50%), Gaps = 3/158 (1%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
VK+A M G P + FN +V K+ +++A+E+ M RGL PD+ +YT+
Sbjct: 388 VKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTV 447
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++ G+++ + E+ E K + + VTY LI YCK ++YDEA+ +EM
Sbjct: 448 IISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFG 507
Query: 291 MMPSPHIFSTLINGLGSDKRLD--EALEFYEKFKANGF 326
+ P+ ++ LI K LD +A +E+ K G
Sbjct: 508 VQPNADEYNKLIQSF-CLKALDWEKAEVLFEEMKQKGL 544
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 137/301 (45%), Gaps = 17/301 (5%)
Query: 81 LSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVI 140
L++E+ EL+A + KL + A F E + GF + ++++ +EAL K
Sbjct: 229 LNLEILNELIA-LFGKLGKSKA-AFDVFSKTE-EFGFTPNAKTYYLTLEALCKRSFMDWA 285
Query: 141 WNLVEDMKQRKLLTR-DTXXXXXXXXXXXXKVKEAVETFE--KMEKYGLKPEVSDFNKLV 197
++ E M + +L+ + K +EA +E K ++ L P L+
Sbjct: 286 CSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRF--VATLI 343
Query: 198 DVLCKSK-SVEKAQELFDKM----RHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK 252
LCK+ ++ AQE+ + R RG+ P ++ ++ + +N+ + +M
Sbjct: 344 TALCKNDGTITFAQEMLGDLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMI 399
Query: 253 CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD 312
+ P + ++++A K DEA M+ + + P + ++ +I+G +D
Sbjct: 400 SKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMD 459
Query: 313 EALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
EA E + K TY+A++ YC D+A ++++EM + GV PN+ Y+ ++
Sbjct: 460 EAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLI 519
Query: 373 Q 373
Q
Sbjct: 520 Q 520
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 129/304 (42%), Gaps = 38/304 (12%)
Query: 64 KILSKSPNSTIDAALADLSVEVSPELVA--EVLNKLSNAGVLALSFFHWAEKQKG---FK 118
K+L S N + D + V P VA E+L L A + + F EK KG FK
Sbjct: 187 KLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRS-EFKRVFEKLKGMKRFK 245
Query: 119 HSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETF 178
T S++ I G +L ++MK+R +
Sbjct: 246 FDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSV------------------------- 280
Query: 179 EKMEKYG--LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWS 236
YG P++ +N L+ VLC + A ++D+++ G PD +Y IL++G
Sbjct: 281 -----YGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCC 335
Query: 237 QQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPH 296
+ + + EM+ F PD + Y L++ KA+K EA + +M ++ + S
Sbjct: 336 KSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCW 395
Query: 297 IFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM 356
++ LI+GL + R + + K G + T++ V C +++ A ++V+EM
Sbjct: 396 TYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEM 455
Query: 357 KQCG 360
+ G
Sbjct: 456 ETRG 459
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 158/385 (41%), Gaps = 65/385 (16%)
Query: 62 ICKILSKSPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQK-GFKHS 120
+ K LS+S ++DA S+ +S +V ++L + S L FF W + G+KHS
Sbjct: 36 LSKTLSQSGTRSLDAN----SIPISEPVVLQILRRNSIDPSKKLDFFRWCYSLRPGYKHS 91
Query: 121 TESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFE 179
++ + + + + +L+ MK+ + L + K + A+ +
Sbjct: 92 ATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLD 151
Query: 180 KMEKYG--LKPEVSD--------------------------------------------- 192
ME+ G L P V D
Sbjct: 152 YMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPG 211
Query: 193 ---FNKLVDVLCKSKSVEKAQELFDKMRH-RGLVPDLKSYTILLEGWSQQQNLLRVNEVC 248
N+L+ L ++ + + +F+K++ + D SY I + G+ +L +
Sbjct: 212 TVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLF 271
Query: 249 REMK------CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLI 302
+EMK F PD+ TY LI+ C K +A+ + E++ P + LI
Sbjct: 272 KEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILI 331
Query: 303 NGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVG 362
G R+D+A+ Y + + NGF P+T YN ++ + ++ +A ++ ++M Q GV
Sbjct: 332 QGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVR 391
Query: 363 PNSRTYDIILQPDKGSKNPRSLLGF 387
+ TY+I++ D +N R+ GF
Sbjct: 392 ASCWTYNILI--DGLFRNGRAEAGF 414
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 4/186 (2%)
Query: 189 EVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI--LLEGWSQQQNLLRVNE 246
+V N + + + A +LF+ G V DL SYT ++ + ++
Sbjct: 593 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMG-VTDLTSYTYNSMMSSFVKKGYFQTARG 651
Query: 247 VCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLG 306
V +M D+ TY ++I K + D A + ++ +++TLIN LG
Sbjct: 652 VLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALG 711
Query: 307 SDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSR 366
RLDEA + ++ K+NG P+ +YN ++ + ++ +AY+ + M G PN
Sbjct: 712 KATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHV 771
Query: 367 TYDIIL 372
T D IL
Sbjct: 772 T-DTIL 776
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 54/112 (48%)
Query: 262 TYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKF 321
TY +++++ K + A G +M E ++ +I GLG R D A ++
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 322 KANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
G + YN ++ A + R+D+A ++ D MK G+ P+ +Y+ +++
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIE 743
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 86/179 (48%)
Query: 193 FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK 252
+ K+V LC +E A+ + M G+ PD+ Y+ ++EG + N+ + +V +M
Sbjct: 294 YRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKML 353
Query: 253 CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD 312
+ + V ++ YC+ + EA + E +E N+ ++ + LG +++
Sbjct: 354 KKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVE 413
Query: 313 EALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDII 371
EA+E + + G AP+ Y ++G C + DA+ ++ EM G P+ Y+++
Sbjct: 414 EAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVL 472
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 8/175 (4%)
Query: 200 LCKSKS-VEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEP 258
LC K + KAQ+L D+M G+ P+ Y L+ W + N+ + E + + P
Sbjct: 574 LCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVP 633
Query: 259 DVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFY 318
D+ TY I+IN YC+ + +A + +M+ +++ P +S L+N SD LD E
Sbjct: 634 DLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLN---SDPELDMKRE-- 688
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+A P+ Y ++ YC + Y + +MK+ + P+ TY ++L+
Sbjct: 689 --MEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLK 741
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 105/230 (45%), Gaps = 35/230 (15%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ +A + ++M K G++PE S + KL+ C+ +V KA+E F+ + + +VPDL +YTI
Sbjct: 581 ISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTI 640
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++ + + + + +MK +PDVVTY +L+N+ D + EM+ +
Sbjct: 641 MINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFD 693
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAV-------------- 336
++P ++ +IN L + ++ K P+ TY +
Sbjct: 694 VIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMK 753
Query: 337 -------VGAYC----WSMRMDD---AYRVVDEMKQCGVGPNSRTYDIIL 372
V Y W ++ D A R+ D+M + GV P++ Y ++
Sbjct: 754 AFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALI 803
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 98/204 (48%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++++A MEK+G+ P+V ++ +++ K+ ++ KA ++F+KM + + +
Sbjct: 306 RIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVS 365
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L+ + Q N ++ +E + D V Y + +A K K +EA+ + EM K
Sbjct: 366 SILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGK 425
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P ++TLI G + +A + + G P+ YN + G + +A
Sbjct: 426 GIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEA 485
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
+ + M+ GV P T++++++
Sbjct: 486 FETLKMMENRGVKPTYVTHNMVIE 509
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 95/233 (40%), Gaps = 29/233 (12%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV+EA+E F +M G+ P+V ++ L+ C A +L +M G PD+ Y
Sbjct: 411 KVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYN 470
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L G + E + M+ +P VT+ ++I A + D+A FY ++ K
Sbjct: 471 VLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHK 530
Query: 290 NM---------------------------MPSP-HIFSTLINGLGSDK-RLDEALEFYEK 320
+ P P ++ TL L ++K + +A + ++
Sbjct: 531 SRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDR 590
Query: 321 FKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
G PE Y ++GA+C + A + + + P+ TY I++
Sbjct: 591 MWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMIN 643
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 74/179 (41%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ +AV+ F KM K + + ++ C+ + +A +LF + R + D Y +
Sbjct: 342 IPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNV 401
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+ + + E+ REM + PDV+ Y LI C K +A EM
Sbjct: 402 AFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTG 461
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P I++ L GL ++ EA E + + G P T+N V+ + +D A
Sbjct: 462 KTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKA 520
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 8/217 (3%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+EA ET + ME G+KP N +++ L + ++KA+ ++ + H+ D +
Sbjct: 483 QEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDAS----M 538
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKY-DEAVGFYHEMQEKN 290
++G+ L E R ++ E P V Y L + C K Y +A M +
Sbjct: 539 VKGFCAAGCLDHAFE--RFIRLEFPLPKSV-YFTLFTSLCAEKDYISKAQDLLDRMWKLG 595
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ P ++ LI + +A EF+E P+ TY ++ YC AY
Sbjct: 596 VEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAY 655
Query: 351 RVVDEMKQCGVGPNSRTYDIILQPDKGSKNPRSLLGF 387
+ ++MK+ V P+ TY ++L D R + F
Sbjct: 656 ALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAF 692
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 4/178 (2%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA + F++ + + + +N D L K VE+A ELF +M +G+ PD+ +YT L+
Sbjct: 379 EAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLI 438
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G Q ++ EM PD+V Y +L EA M+ + +
Sbjct: 439 GGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVK 498
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P+ + +I GL LD+A FYE + + ++V +C + +D A+
Sbjct: 499 PTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDA----SMVKGFCAAGCLDHAF 552
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 6/178 (3%)
Query: 124 FHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEK 183
+ +I + K ++ L +DMK+R+++ K K +M+
Sbjct: 701 YTIMINRYCHLNDLKKVYALFKDMKRREIVP------DVVTYTVLLKNKPERNLSREMKA 754
Query: 184 YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLR 243
+ +KP+V + L+D CK + +A+ +FD+M G+ PD YT L+ + L
Sbjct: 755 FDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKE 814
Query: 244 VNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTL 301
+ M +PDVV Y LI C+ +AV EM EK + P+ S +
Sbjct: 815 AKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 55/102 (53%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA F++M + G+ P+ + + L+ CK +++A+ +FD+M G+ PD+ YT L+
Sbjct: 779 EAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALI 838
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAK 274
G + +L+ ++ +EM + +P + + A KAK
Sbjct: 839 AGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAVHYAKLKAK 880
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 94/203 (46%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
E M + P + + K++ LC +K +A +F ++ +G PD YT ++ G+
Sbjct: 269 EVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGF 328
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSP 295
++ L ++ EM + P+ Y ++I+ + K + FY+EM +
Sbjct: 329 CEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTM 388
Query: 296 HIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDE 355
+T+I G S + DEA E ++ G P TYNA++ +C +++ ++ E
Sbjct: 389 LSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKE 448
Query: 356 MKQCGVGPNSRTYDIILQPDKGS 378
+K G+ P+ Y +++ K S
Sbjct: 449 LKALGLKPSGMAYAALVRNLKMS 471
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 123/289 (42%), Gaps = 4/289 (1%)
Query: 87 PELVAEVLNKLSNAGVL--ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLV 144
P L+ + + LS G++ A+ ++ K G S + ++++ K R+ W L
Sbjct: 145 PTLLEQYVKCLSEEGLVEEAIEVYN-VLKDMGISSSVVTCNSVLLGCLKARKLDRFWELH 203
Query: 145 EDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSK 204
++M + + + V E E ++ K GL P + KL+ C+
Sbjct: 204 KEMVESEF-DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIG 262
Query: 205 SVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYG 264
+ E+ M P + Y +++G + L + + +K + + PD V Y
Sbjct: 263 NYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYT 322
Query: 265 ILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKAN 324
+I +C+ A + EM +K M P+ ++ +I+G + FY + N
Sbjct: 323 TMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRN 382
Query: 325 GFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
G+ + N ++ +C + D+A+ + M + GV PN+ TY+ +++
Sbjct: 383 GYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIK 431
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 80/165 (48%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA F+ ++ G P+ + ++ C+ + A++L+ +M +G+ P+ +Y +++
Sbjct: 301 EAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMI 360
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
G ++ + V EM + +++ +I +C K DEA + M E +
Sbjct: 361 HGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVT 420
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVV 337
P+ ++ LI G + ++++ L+ Y++ KA G P Y A+V
Sbjct: 421 PNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 211 ELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAY 270
ELF +M RGLV + +YT L++G Q + E+ +EM + PD++TY IL++
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 271 CKAKKYDEAV---------GFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKF 321
CK K ++A+ + + K + P+ ++T+I+G +EA + K
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 322 KANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDII 371
K +G P++ TYN ++ A+ + ++ EM+ C ++ TY ++
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 171
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 11/173 (6%)
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
+E F +M + GL + L+ L ++ + AQE+F +M G+ PD+ +Y ILL+G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 235 WSQQQNLLRV----------NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYH 284
+ L + + C + + +P+VVTY +I+ +CK +EA +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFC-SLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFR 119
Query: 285 EMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVV 337
+M+E +P ++TLI D + E ++ ++ FA + TY V
Sbjct: 120 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVT 172
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV++ + F + G+KP V + ++ CK E+A LF KM+ G +PD +Y
Sbjct: 75 KVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYN 134
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILIN 268
L+ + + E+ +EM+ F D TYG++ +
Sbjct: 135 TLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 124/265 (46%), Gaps = 5/265 (1%)
Query: 129 EALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKM-EKYGLK 187
+A+ I + + +++E K K L T + + A++ FE + E+ K
Sbjct: 88 KAISIILRREATKSIIEKKKGSKKLLPRTVLESLHERITALRWESAIQVFELLREQLWYK 147
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEV 247
P V + KL+ +L K K EKA ELF +M + G V + + YT L+ +S+ +
Sbjct: 148 PNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTL 207
Query: 248 CREMKCE--CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGL 305
MK C +PDV TY ILI ++ + +D+ +M+ + + P+ ++TLI+
Sbjct: 208 LERMKSSHNC-QPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAY 266
Query: 306 GSDKRLDEA-LEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPN 364
G K E + + P++ T N+ + A+ + +++ ++ + G+ PN
Sbjct: 267 GKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPN 326
Query: 365 SRTYDIILQPDKGSKNPRSLLGFPE 389
RT++I+L S N + + E
Sbjct: 327 IRTFNILLDSYGKSGNYKKMSAVME 351
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 106/230 (46%), Gaps = 2/230 (0%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD--TXXXXXXXXXXXXK 170
+++G + +T +++ LI+A GK + F + + + M D T +
Sbjct: 248 RRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQ 307
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
++ +EK + G++P + FN L+D KS + +K + + M+ + +Y +
Sbjct: 308 IEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNV 367
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+++ + + +L ++ + R M+ E P VT L+ AY +A K D+ G ++ +
Sbjct: 368 VIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSD 427
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
+ F+ L++ G ++ E E + GF P+ TY +V AY
Sbjct: 428 IRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAY 477
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/282 (17%), Positives = 112/282 (39%), Gaps = 38/282 (13%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDM-KQRKLLTRDTXXXXX 162
A+ F +Q +K + + LI LGK +Q + L ++M + ++ +
Sbjct: 133 AIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALV 192
Query: 163 XXXXXXXKVKEAVETFEKMEK-YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGL 221
+ A E+M+ + +P+V ++ L+ + + +K Q+L MR +G+
Sbjct: 193 SAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGI 252
Query: 222 VPDLKSYTILLEGWSQQQNLLRVNEV---------CR-------------------EMKC 253
P+ +Y L++ + + + + + C+ EM
Sbjct: 253 RPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMME 312
Query: 254 ECFE--------PDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGL 305
C+E P++ T+ IL+++Y K+ Y + MQ+ + + ++ +I+
Sbjct: 313 NCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAF 372
Query: 306 GSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
G L + + ++ P T ++V AY + + D
Sbjct: 373 GRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKAD 414
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 87/172 (50%), Gaps = 13/172 (7%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K EA F + GL+P+V +N ++ + S+ +A++L+ +M RGLVPD +Y
Sbjct: 29 KFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEMIRRGLVPDTITYN 84
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ G +Q L + +V + C T+ LIN YCKA + + + + EM +
Sbjct: 85 SMIHGLCKQNKLAQARKVSKS--CS-------TFNTLINGYCKATRVKDGMNLFCEMYRR 135
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
++ + ++TLI+G + AL+ +++ +NG + T+ ++ C
Sbjct: 136 GIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLC 187
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 87/195 (44%), Gaps = 13/195 (6%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
F+ M + + + + +N ++ LCK+ ++A +F + GL PD+++Y +++ S
Sbjct: 2 FKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSS- 60
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
L R ++ EM PD +TY +I+ CK K +A + + S
Sbjct: 61 ---LGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCST 108
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
F+TLING R+ + + + + G TY ++ + + A + EM
Sbjct: 109 FNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMV 168
Query: 358 QCGVGPNSRTYDIIL 372
GV +S T+ IL
Sbjct: 169 SNGVYSSSITFRDIL 183
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 68/162 (41%), Gaps = 13/162 (8%)
Query: 212 LFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYC 271
+F MR + D Y I++ G + + + +PDV TY ++I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 272 KAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETP 331
+ A Y EM + ++P ++++I+GL +L +A + +
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARK---------VSKSCS 107
Query: 332 TYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
T+N ++ YC + R+ D + EM + G+ N TY ++
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIH 149
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 93/186 (50%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
VKEA +ME+ G+ P FN L+ + EK E + M RGL+P ++
Sbjct: 355 VKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNE 414
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
+++ S+ +N+ R NE+ + + F PD TY LI + + D+A+ ++EM+ +
Sbjct: 415 MVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRK 474
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
M P +F +LI GL + +++ ++ + K P Y+A++ A+ +A
Sbjct: 475 MSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNAD 534
Query: 351 RVVDEM 356
RV +EM
Sbjct: 535 RVYNEM 540
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 136/338 (40%), Gaps = 8/338 (2%)
Query: 44 SGSLRIHTLIPHTPHADKICKILSKSPNSTIDAALAD-----LSVEVSPELVAEVLNKL- 97
S +L IH L+ D I S NS D+ L D + S LV ++L +
Sbjct: 115 SYALTIHILVKARLLIDARALIESSLLNSPPDSDLVDSLLDTYEISSSTPLVFDLLVQCY 174
Query: 98 SNAGVLALSFFHWAEK-QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD 156
+ L L F + GF S + + LI K + ++W + E +++ +
Sbjct: 175 AKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNE 234
Query: 157 -TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDK 215
T ++KE V+ +++ P V LV + + +E++ L +
Sbjct: 235 ITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKR 294
Query: 216 MRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKK 275
+ + +V D Y+I++ +++ +L+ +V EM F + Y + + C+
Sbjct: 295 LLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGD 354
Query: 276 YDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNA 335
EA EM+E + P F+ LI G ++ LE+ E G P +N
Sbjct: 355 VKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNE 414
Query: 336 VVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+V + ++ A ++ + G P+ TY +++
Sbjct: 415 MVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIR 452
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 122/297 (41%), Gaps = 26/297 (8%)
Query: 82 SVEVSPELVAEVLNKLSN--AGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKV 139
S+++S L+ +L + N ALSFFHW+ + +H +S+ I L K R
Sbjct: 72 SIDLSDSLIETILLRFKNPETAKQALSFFHWSSHTRNLRHGIKSYALTIHILVKARLLID 131
Query: 140 IWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDV 199
L+E D V ++T+E P V F+ LV
Sbjct: 132 ARALIESSLLNSPPDSDL-------------VDSLLDTYEISSS---TPLV--FDLLVQC 173
Query: 200 LCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN---LLRVNEVCREMKCECF 256
K + +E ++F ++ G + + L+ S+ + + R+ E + +
Sbjct: 174 YAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKR---I 230
Query: 257 EPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALE 316
P+ +T I+I CK + E V + K +PS + ++L+ + + R++E++
Sbjct: 231 YPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMS 290
Query: 317 FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
++ +T Y+ VV A + A +V DEM Q G NS Y + ++
Sbjct: 291 LLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVR 347
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/201 (19%), Positives = 90/201 (44%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A + F++M + G + V V C+ V++A+ L +M G+ P +++ L+
Sbjct: 323 ARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIG 382
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G+++ + E C M P + ++ + K + + A + +K +P
Sbjct: 383 GFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVP 442
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
H +S LI G +D+AL+ + + + +P + +++ C +++ + +
Sbjct: 443 DEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYL 502
Query: 354 DEMKQCGVGPNSRTYDIILQP 374
MK+ + PN+ YD +++
Sbjct: 503 KIMKKRLIEPNADIYDALIKA 523
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 111/240 (46%), Gaps = 40/240 (16%)
Query: 173 EAVETFEKM-EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+A+E F+ + E+ +P+ + KL+ +L KS +AQ+LFD+M GL P ++ YT L
Sbjct: 106 QALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTAL 165
Query: 232 LEGWSQQQNLLRVNEVCREMKC--ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L +++ + + +MK +C +PDV TY L+ A A ++D Y EM E+
Sbjct: 166 LAAYTRSNLIDDAFSILDKMKSFPQC-QPDVFTYSTLLKACVDASQFDLVDSLYKEMDER 224
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALE--------------------------------- 316
+ P+ + +++G G R D+ +
Sbjct: 225 LITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDM 284
Query: 317 ---FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+YEKF+ G PET T+N ++G+Y D V++ M++ + TY+ I++
Sbjct: 285 MESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIE 344
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 119/263 (45%), Gaps = 22/263 (8%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKME 182
++ L++A QF ++ +L ++M +R L+T +T V F++ME
Sbjct: 197 TYSTLLKACVDASQFDLVDSLYKEMDER-LITPNTVTQNIVLSGYGR-----VGRFDQME 250
Query: 183 KY--------GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
K KP+V N ++ V ++ + ++K R+ G+ P+ +++ IL+
Sbjct: 251 KVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGS 310
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
+ +++ +++ V M+ F TY +I A+ + +M+ + M
Sbjct: 311 YGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKAD 370
Query: 295 PHIFSTLINGL---GSDKRLDEALEFYEKFKANGFAPE-TPTYNAVVGAYCWSMRMDDAY 350
F LING G ++ +++ KF+ PE T YNAV+ A + + +
Sbjct: 371 TKTFCCLINGYANAGLFHKVISSVQLAAKFEI----PENTAFYNAVISACAKADDLIEME 426
Query: 351 RVVDEMKQCGVGPNSRTYDIILQ 373
RV MK+ +SRT++I+++
Sbjct: 427 RVYIRMKERQCVCDSRTFEIMVE 449
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 156/382 (40%), Gaps = 17/382 (4%)
Query: 3 FSRSPKRFFNLFSSNLPLSKPYPASLTPLST-SPTIKLPQNLSGSLRIHTLIPHTPHADK 61
S S F N S N + P+ P S+ +P L + + + D+
Sbjct: 23 LSLSASSFRNFTSGNNGDAIPFSTFTKPSSSIAPGDFLVREWKDWFKHRDVKQSHQLIDR 82
Query: 62 ICKILSKSPNSTIDAA----LADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGF 117
I IL N D A L++L + ++ + V +VL+ + L FF WA +Q GF
Sbjct: 83 IFDILRAPSNDGDDRAFYLHLSNLRLRLTEKFVLDVLSHTRYDILCCLKFFDWAARQPGF 142
Query: 118 KHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXX------XXXXXXXXXXKV 171
H+ +FHA+ + L R K++ L+ D R + +
Sbjct: 143 HHTRATFHAIFKIL---RGAKLV-TLMIDFLDRSVGFESCRHSLRLCDALVVGYAVAGRT 198
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
A++ F M GL + ++ L++ L + K + +FD++ RG V + +++IL
Sbjct: 199 DIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFVCAV-THSIL 257
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++ + +Q L + R + GIL++A C +K+ EA E++
Sbjct: 258 VKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGT 317
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFK-ANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ ++ I L L+ +F +K G E YN++V +D Y
Sbjct: 318 VNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVY 377
Query: 351 RVVDEMKQCGVGPNSRTYDIIL 372
++ EM GV PN +T + L
Sbjct: 378 DILTEMMVRGVSPNKKTMNAAL 399
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 103/254 (40%), Gaps = 41/254 (16%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K K A ++ M++ G+ P V+ ++ K++ + A F +R +G + Y
Sbjct: 618 KPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKK-RLYQ 676
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+++ G + L EMK E +P + Y + I C +KYDEAVG +E ++
Sbjct: 677 VMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKS 736
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY--------- 340
+ I + L++ K + EA + PE + ++G +
Sbjct: 737 GRRITAFIGNVLLHNAMKSKGVYEAWTRMRNIEDK--IPEMKSLGELIGLFSGRIDMEVE 794
Query: 341 ----------CWSMRM---------------DDAYRVVDEMKQCGVGPNSRTYDIILQPD 375
C+ + M +DAY +V+ + + G PN RT D+IL+
Sbjct: 795 LKRLDEVIEKCYPLDMYTYNMLLRMIVMNQAEDAYEMVERIARRGYVPNERT-DMILERA 853
Query: 376 KG---SKNPRSLLG 386
+N RS LG
Sbjct: 854 NRILEERNSRSNLG 867
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 84/209 (40%), Gaps = 4/209 (1%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
+ +M G+ P N + CK+ V++A EL+ G P SY L+
Sbjct: 378 DILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTL 437
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSP 295
+++ + +V + T+ L NA C K D A E++++P
Sbjct: 438 CANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKR 497
Query: 296 HIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDE 355
+I+ L ++++AL E F +G + +++ MR D A +++
Sbjct: 498 IAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIR 557
Query: 356 MKQCGVGPNSRTYDIILQ----PDKGSKN 380
M++ G P Y ++Q + G KN
Sbjct: 558 MQEKGYTPTRSLYRNVIQCVCEMESGEKN 586
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 127/340 (37%), Gaps = 44/340 (12%)
Query: 56 TPHADKICKILSKSPNSTIDAALADLSVEV-----SPELVAEVLNKLSNAGVLALSFFHW 110
T HA I KIL + T+ D SV S L ++ + AG ++ H+
Sbjct: 148 TFHA--IFKILRGAKLVTLMIDFLDRSVGFESCRHSLRLCDALVVGYAVAGRTDIALQHF 205
Query: 111 AEKQ-KGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXX 169
+ +G + +H L+ AL + + F + + + R + T
Sbjct: 206 GNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFVCAVTHSILVKKFCKQG 265
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ EA + + S LVD LC + ++A +L D+++ G V ++Y
Sbjct: 266 KLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYN 325
Query: 230 IL----------------------LEGWS--------------QQQNLLRVNEVCREMKC 253
I LEG ++ NL V ++ EM
Sbjct: 326 IWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMV 385
Query: 254 ECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDE 313
P+ T + +CKA DEA+ Y E P+ ++ LI+ L +++ +++
Sbjct: 386 RGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQ 445
Query: 314 ALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
A + + G T++ + A CW + D A +V
Sbjct: 446 AYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELV 485
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 137/325 (42%), Gaps = 47/325 (14%)
Query: 85 VSPELVAEVLNK-LSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNL 143
+SP LVA V++ L N LAL FF+WA +Q G+ H + S+H++ ++L RQF + L
Sbjct: 45 ISPSLVARVIDPFLLNHHSLALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDAL 104
Query: 144 VEDMKQRK-LLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYG--LKPEVSDFNKLVDVL 200
+ +K K LL K + A E+ G + P+V N+L+ L
Sbjct: 105 FKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVC--NRLLAGL 162
Query: 201 CKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW----SQQQNLLR-VNEV-------- 247
+ AQ+LF KMRH+G+ + + + + GW S+ LLR V+EV
Sbjct: 163 TSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYI-GWFCRSSETNQLLRLVDEVKKANLNIN 221
Query: 248 ---------------CREMKC----------ECFEPDVVTYGILINAYCKAKKYDEAVGF 282
REM +C +PD + Y ++ A+ E
Sbjct: 222 GSIIALLILHSLCKCSREMDAFYILEELRNIDC-KPDFMAYRVIAEAFVVTGNLYERQVV 280
Query: 283 YHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCW 342
+ ++ + P + I L S KRL EA E E + F + +A++G+
Sbjct: 281 LKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVS- 339
Query: 343 SMRMDDAYRVVDEMKQCGVGPNSRT 367
++ D A + M G P RT
Sbjct: 340 AVDPDSAVEFLVYMVSTGKLPAIRT 364
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 76/146 (52%)
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
++ +E + G E+ ++ ++ LCK+ V ++ +M+ GL PD+ Y L+E
Sbjct: 382 IKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEA 441
Query: 235 WSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
+ + + ++ EM E + ++ TY +LI + + +E++ + +M E+ + P
Sbjct: 442 CCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPD 501
Query: 295 PHIFSTLINGLGSDKRLDEALEFYEK 320
I+ +LI GL + +++ A+E + K
Sbjct: 502 ETIYMSLIEGLCKETKIEAAMEVFRK 527
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 79/179 (44%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
AVE M G P + +KL LC+ + + ++ + +G +L+SY++++
Sbjct: 346 AVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMIS 405
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ + +EMK E PDV Y LI A CKA+ A + EM +
Sbjct: 406 FLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKM 465
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
+ ++ LI L + +E+L ++K G P+ Y +++ C +++ A V
Sbjct: 466 NLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEV 524
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 65/121 (53%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V+E+ ++M+K GL P+VS +N L++ CK++ + A++L+D+M G +L +Y
Sbjct: 412 RVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYN 471
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L+ S++ + +M EPD Y LI CK K + A+ + + E+
Sbjct: 472 VLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMER 531
Query: 290 N 290
+
Sbjct: 532 D 532
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 1/197 (0%)
Query: 177 TFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWS 236
+K K G+ P SD+ + L +K + +A+E+ + + G P L G
Sbjct: 280 VLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIV-SGKFPMDNDILDALIGSV 338
Query: 237 QQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPH 296
+ E M P + T L C+ K D + Y + K
Sbjct: 339 SAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQ 398
Query: 297 IFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM 356
+S +I+ L R+ E+ ++ K G AP+ YNA++ A C + + A ++ DEM
Sbjct: 399 SYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEM 458
Query: 357 KQCGVGPNSRTYDIILQ 373
G N TY+++++
Sbjct: 459 FVEGCKMNLTTYNVLIR 475
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 112/253 (44%), Gaps = 2/253 (0%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKM 181
+++ LI + F L ++M ++K+ T T +VKEA++ M
Sbjct: 154 TYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDM 213
Query: 182 EK-YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
K YG++P V + L+ LC+ + A +L D+ + D Y+ L+ +
Sbjct: 214 LKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGR 273
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
V+ + EM + +PD VTY +LIN +C + A EM EK + P ++
Sbjct: 274 SNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNM 333
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
++ K+ +EA +E G +P+T +Y V C ++ ++A ++DEM G
Sbjct: 334 ILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKG 393
Query: 361 VGPNSRTYDIILQ 373
P + LQ
Sbjct: 394 YKPRRDRLEGFLQ 406
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 126/285 (44%), Gaps = 8/285 (2%)
Query: 93 VLNKLSNAGVL--ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR 150
+++ S +G AL F K+K K + +F LI L K + K + DM +
Sbjct: 158 LIHGCSQSGCFDDALKLFDEMVKKK-VKPTGVTFGTLIHGLCKDSRVKEALKMKHDM-LK 215
Query: 151 KLLTRDTXXXXXXXXXXXXKVKEAVETFE-KMEKY--GLKPEVSDFNKLVDVLCKSKSVE 207
R T ++ E F+ K E Y +K + + ++ L+ L K+
Sbjct: 216 VYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSN 275
Query: 208 KAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILI 267
+ + ++M +G PD +Y +L+ G+ + + N V EM + +PDV++Y +++
Sbjct: 276 EVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMIL 335
Query: 268 NAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFA 327
+ + KK++EA + +M + P + + +GL + +EA ++ G+
Sbjct: 336 GVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYK 395
Query: 328 PETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
P + C S +++ +V+ + + G+ ++ + +++
Sbjct: 396 PRRDRLEGFLQKLCESGKLEILSKVISSLHR-GIAGDADVWSVMI 439
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 96/196 (48%), Gaps = 2/196 (1%)
Query: 175 VETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEG 234
+E + + P+ + +V + +++A+++ +M G+ + +Y +LL+G
Sbjct: 437 LEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKG 496
Query: 235 WSQQQNLLRVNEVCREMKCEC-FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ +Q + R ++ REM + EPDVV+Y I+I+ A+ F++EM+ + + P
Sbjct: 497 YCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAP 556
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKAN-GFAPETPTYNAVVGAYCWSMRMDDAYRV 352
+ ++TL+ + A +++ + + +N +V YC ++DA RV
Sbjct: 557 TKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRV 616
Query: 353 VDEMKQCGVGPNSRTY 368
V MK+ G PN TY
Sbjct: 617 VSRMKENGFYPNVATY 632
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
E E G++P+V +N ++D A F++MR RG+ P SYT L++ ++
Sbjct: 512 EMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMS 571
Query: 239 QNLLRVNEVCREMKCE-CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
N V EM + + D++ + +L+ YC+ ++A M+E P+
Sbjct: 572 GQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVAT 631
Query: 298 FSTLINGLGSDKRLDEALEFYEKFK 322
+ +L NG+ ++ +AL +++ K
Sbjct: 632 YGSLANGVSQARKPGDALLLWKEIK 656
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 4/173 (2%)
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRH---RGLVPDLKSYTILLEGWSQQQNLLRV 244
P+ + L+ K+ V + + MR R PD +YT ++ + + R
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE-KNMMPSPHIFSTLIN 303
+V EM + +TY +L+ YCK + D A EM E + P ++ +I+
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 304 GLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM 356
G AL F+ + + G AP +Y ++ A+ S + A RV DEM
Sbjct: 532 GCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEM 584
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 20/183 (10%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVP-DLKSYTILL 232
A+ F +M G+ P + L+ S + A +FD+M + V DL ++ +L+
Sbjct: 542 ALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLV 601
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK--- 289
EG+ + + V MK F P+V TYG L N +A+K +A+ + E++E+
Sbjct: 602 EGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKERCAV 661
Query: 290 ----------------NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTY 333
+ P + TL + +ALE + NG P Y
Sbjct: 662 KKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPNKTKY 721
Query: 334 NAV 336
+
Sbjct: 722 KKI 724
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 3/152 (1%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
E F+KM++ GL P ++D LCK V++A +LF MR +G +P++ YT ++E +
Sbjct: 120 EIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSP 295
+ + + R+M+ P+ +YG+L+ D+AV F EM E P+
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 296 HIFSTLINGLGSDKRLDEALEFYEKFKANGFA 327
F L++ L K +++A + GFA
Sbjct: 237 PTFVELVDALCRVKGVEQAQSAIDTLNQKGFA 268
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 62/120 (51%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V+EA++ F M G PEV + +V+ CK+ +E A+ +F KM++ G+ P+ SY +
Sbjct: 147 VQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGV 206
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++G L C EM P+V T+ L++A C+ K ++A + +K
Sbjct: 207 LVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKG 266
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 282 FYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
+ +M+E ++P+ +++GL D + EA++ + + G PE Y AVV A+C
Sbjct: 121 IFKKMKEGGLIPN---AVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 342 WSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+ +++DA R+ +M+ G+ PN+ +Y +++Q
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQ 209
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLING 304
+E+ ++MK P+ V +++ CK EA+ + M++K +P I++ ++
Sbjct: 119 DEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEA 175
Query: 305 LGSDKRLDEALEFYEKFKANGFAPETPTYNAVV-GAYCWSMRMDDAYRVVDEMKQCGVGP 363
++++A + K + NG AP +Y +V G Y +M +DDA EM + G P
Sbjct: 176 FCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNM-LDDAVAFCSEMLESGHSP 234
Query: 364 NSRTY 368
N T+
Sbjct: 235 NVPTF 239
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 3/152 (1%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
E F+KM++ GL P ++D LCK V++A +LF MR +G +P++ YT ++E +
Sbjct: 120 EIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSP 295
+ + + R+M+ P+ +YG+L+ D+AV F EM E P+
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 296 HIFSTLINGLGSDKRLDEALEFYEKFKANGFA 327
F L++ L K +++A + GFA
Sbjct: 237 PTFVELVDALCRVKGVEQAQSAIDTLNQKGFA 268
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 62/120 (51%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V+EA++ F M G PEV + +V+ CK+ +E A+ +F KM++ G+ P+ SY +
Sbjct: 147 VQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGV 206
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++G L C EM P+V T+ L++A C+ K ++A + +K
Sbjct: 207 LVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKG 266
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 282 FYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
+ +M+E ++P+ +++GL D + EA++ + + G PE Y AVV A+C
Sbjct: 121 IFKKMKEGGLIPN---AVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 342 WSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+ +++DA R+ +M+ G+ PN+ +Y +++Q
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQ 209
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLING 304
+E+ ++MK P+ V +++ CK EA+ + M++K +P I++ ++
Sbjct: 119 DEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEA 175
Query: 305 LGSDKRLDEALEFYEKFKANGFAPETPTYNAVV-GAYCWSMRMDDAYRVVDEMKQCGVGP 363
++++A + K + NG AP +Y +V G Y +M +DDA EM + G P
Sbjct: 176 FCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNM-LDDAVAFCSEMLESGHSP 234
Query: 364 NSRTY 368
N T+
Sbjct: 235 NVPTF 239
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 90/187 (48%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
+ K G + +V ++N ++ K+K EKA LF M+++G PD +Y L + +
Sbjct: 503 YGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAG 562
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHI 297
+ + EM +P TY +I +Y + +AV Y M++ + P+ +
Sbjct: 563 VDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVV 622
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
+ +LING ++EA++++ + +G +++ AY +++A RV D+MK
Sbjct: 623 YGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMK 682
Query: 358 QCGVGPN 364
GP+
Sbjct: 683 DSEGGPD 689
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/295 (18%), Positives = 118/295 (40%), Gaps = 36/295 (12%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLL-TRDTXXXXXXXXXXXXKVK 172
+ G T +F+ +I G +L++ M+++ + T ++
Sbjct: 333 KSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIE 392
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
A+E + K+ K GL P+ ++ +LC+ K V + + + +M + D S +++
Sbjct: 393 AALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIM 452
Query: 233 EGWSQQQNLLRVNEVCREMKCECF-----------------------------------E 257
+ + + +++ + + +C
Sbjct: 453 QMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQR 512
Query: 258 PDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEF 317
DV+ Y ++I AY KAK +++A+ + M+ + P +++L L +DEA
Sbjct: 513 NDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRI 572
Query: 318 YEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+ +G P TY A++ +Y + DA + + M++ GV PN Y ++
Sbjct: 573 LAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLI 627
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 81/166 (48%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
++A+ F+ M+ G P+ +N L +L V++AQ + +M G P K+Y +
Sbjct: 532 EKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAM 591
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+ + + L ++ M+ +P+ V YG LIN + ++ +EA+ ++ M+E +
Sbjct: 592 IASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGV 651
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVV 337
+ + ++LI L+EA Y+K K + P+ N+++
Sbjct: 652 QSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSML 697
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 105/258 (40%), Gaps = 1/258 (0%)
Query: 121 TESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVETFE 179
T +F+ LI+ GK + NL +M + + + T + EA +
Sbjct: 305 TSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLK 364
Query: 180 KMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQ 239
KME+ G+ P+ +N L+ + + +E A E + K+R GL PD ++ +L Q++
Sbjct: 365 KMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRK 424
Query: 240 NLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
+ V V EM D + +++ Y +A + Q ++ S + +
Sbjct: 425 MVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAA 484
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQC 359
+ ++ FY K +G + YN ++ AY + + A + MK
Sbjct: 485 VIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQ 544
Query: 360 GVGPNSRTYDIILQPDKG 377
G P+ TY+ + Q G
Sbjct: 545 GTWPDECTYNSLFQMLAG 562
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 5/188 (2%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+ +AV+ +E MEK G+KP + L++ +S VE+A + F M G+ + T
Sbjct: 601 LSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTS 660
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++ +S+ L V +MK PDV +++ EA ++ ++EK
Sbjct: 661 LIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG 720
Query: 291 M--MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
+ S L G+G LDEA+E E+ + +G + ++N V+ Y ++ +
Sbjct: 721 TCDVISFATMMYLYKGMG---MLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSE 777
Query: 349 AYRVVDEM 356
+ EM
Sbjct: 778 CCELFHEM 785
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/295 (18%), Positives = 123/295 (41%), Gaps = 4/295 (1%)
Query: 81 LSVEVSPELVAEVLNKLSNAG--VLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFK 138
L +S +A V++ + G V A + F+ G ++ ++ +I+A GK + +
Sbjct: 473 LDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHE 532
Query: 139 VIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLV 197
+L + MK + + T V EA +M G KP + ++
Sbjct: 533 KALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMI 592
Query: 198 DVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFE 257
+ + A +L++ M G+ P+ Y L+ G+++ + + R M+ +
Sbjct: 593 ASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQ 652
Query: 258 PDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEF 317
+ + LI AY K +EA Y +M++ P +++++ + EA
Sbjct: 653 SNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESI 712
Query: 318 YEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+ + G + ++ ++ Y +D+A V +EM++ G+ + +++ ++
Sbjct: 713 FNALREKG-TCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVM 766
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 90/176 (51%), Gaps = 6/176 (3%)
Query: 200 LCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ---QNLLRVNEVCREMKCECF 256
LC ++ A +KM + G P SY +++ Q+ ++L + + +E+ F
Sbjct: 487 LCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELD---F 543
Query: 257 EPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALE 316
PDV TY I++N CK D A M+E + P+ I+S++I LG R+ EA E
Sbjct: 544 VPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEE 603
Query: 317 FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+ K +G P+ Y ++ Y + R+D+A +V+E+ + + P+S TY +++
Sbjct: 604 TFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLI 659
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%)
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEV 247
P+V + +V+ LCK + A + D M GL P + Y+ ++ +Q ++ E
Sbjct: 545 PDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEET 604
Query: 248 CREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGS 307
+M +PD + Y I+IN Y + + DEA E+ + + PS ++ LI+G
Sbjct: 605 FAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVK 664
Query: 308 DKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
+++ ++ +K +G +P Y A++G +
Sbjct: 665 MGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHF 697
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 109/242 (45%), Gaps = 39/242 (16%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V EA ETF KM + G++P+ + +++ ++ +++A EL +++ L P +YT
Sbjct: 597 RVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYT 656
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L+ G+ + + + + +M + P+VV Y LI + K + + + M E
Sbjct: 657 VLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGEN 716
Query: 290 NMMPSPHIFSTLINGL----------------GSDKRLDE-------------------- 313
++ + TL++GL G +K L
Sbjct: 717 DIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSK 776
Query: 314 --ALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDII 371
A+E K K + P +N ++ YC + R+D+AY ++ M++ G+ PN TY I+
Sbjct: 777 SFAMEVIGKVKKS-IIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTIL 835
Query: 372 LQ 373
++
Sbjct: 836 MK 837
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 86/199 (43%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+ EKM G P +N ++ L + +E L + ++ VPD+ +Y I++
Sbjct: 496 ALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVN 555
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
++ + + M+ P V Y +I + K + EA + +M E + P
Sbjct: 556 ELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQP 615
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ +IN + R+DEA E E+ + P + TY ++ + M+ + +
Sbjct: 616 DEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYL 675
Query: 354 DEMKQCGVGPNSRTYDIIL 372
D+M + G+ PN Y ++
Sbjct: 676 DKMLEDGLSPNVVLYTALI 694
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 87/182 (47%), Gaps = 7/182 (3%)
Query: 209 AQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILIN 268
A E+ K++ + ++P+L + ++ G+ L M+ E P++VTY IL+
Sbjct: 779 AMEVIGKVK-KSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMK 837
Query: 269 AYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAP 328
++ +A + A+ + + N P ++STL+ GL KR +AL + + +G P
Sbjct: 838 SHIEAGDIESAIDLF---EGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINP 894
Query: 329 ETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNS--RTYDI-ILQPDKGSKNPRSLL 385
+Y ++ C+S +A +VV +M + P S T+ I IL +K + R+L
Sbjct: 895 NKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALF 954
Query: 386 GF 387
Sbjct: 955 AI 956
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 124/297 (41%), Gaps = 8/297 (2%)
Query: 64 KILSKSPNSTIDAALADLSVEVSPEL----VAEVLNKLSNAGV--LALSFFHWAEKQKGF 117
+++ S + + A +AD +V+ EL ++ KL+ G +A +F++ G
Sbjct: 68 RVIDGSSSISEAALVADFAVDNGIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGI 127
Query: 118 KHSTESFHALIEALGKIRQF-KVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVE 176
+ +++ L K+R+F + +L + +R++ + EA
Sbjct: 128 VPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFH 187
Query: 177 TFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVP-DLKSYTILLEGW 235
FE++++ G + +L LC + +A + D + +P + Y L +
Sbjct: 188 CFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCF 247
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSP 295
++ + M+ + + D V Y L+ YCK A+ Y M E++ P
Sbjct: 248 CKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDP 307
Query: 296 HIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
IF+TLI+G LD+ + + G TY+ ++G+YC +D A R+
Sbjct: 308 CIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRL 364
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 86/187 (45%), Gaps = 4/187 (2%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A+E K++K + P + N ++ C + +++A + M+ G+VP+L +YTIL++
Sbjct: 779 AMEVIGKVKK-SIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMK 837
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ ++ ++ CE PD V Y L+ C K+ +A+ EMQ+ + P
Sbjct: 838 SHIEAGDIESAIDLFEGTNCE---PDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINP 894
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ + L+ L + EA++ + A P + + ++ C ++ +A +
Sbjct: 895 NKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALF 954
Query: 354 DEMKQCG 360
M Q G
Sbjct: 955 AIMVQSG 961
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 1/162 (0%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA F+ ME G + + L+ CK ++ A L+ +M R D + L+
Sbjct: 255 EAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLI 314
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVG-FYHEMQEKNM 291
G+ + L + + +M + + +V TY I+I +YCK D A+ F + +++
Sbjct: 315 HGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDI 374
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTY 333
+ H ++ LI G +D+A++ + NG P+ TY
Sbjct: 375 SRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITY 416
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 75/185 (40%), Gaps = 1/185 (0%)
Query: 190 VSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCR 249
V+ + L CK +A+ LFD M G D YT L++ + + N+ +
Sbjct: 237 VNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYL 296
Query: 250 EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDK 309
M FE D + LI+ + K D+ + +M +K + + + +I +
Sbjct: 297 RMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEG 356
Query: 310 RLDEALE-FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
+D AL F + + Y ++ + MD A ++ M G+ P+ TY
Sbjct: 357 NVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITY 416
Query: 369 DIILQ 373
++L+
Sbjct: 417 FVLLK 421
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 81/212 (38%), Gaps = 29/212 (13%)
Query: 190 VSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCR 249
V + L+ K ++KA +L +M G+VPD +Y +LL+ + L + +
Sbjct: 378 VHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQ 437
Query: 250 --------------------EMKCECFEPDV---------VTYGILINAYCKAKKYDEAV 280
E+K E ++ V ++ A C + Y A+
Sbjct: 438 SILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAAL 497
Query: 281 GFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
+M P P ++++I L + +++ + F P+ TY VV
Sbjct: 498 SRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNEL 557
Query: 341 CWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
C D A+ ++D M++ G+ P Y I+
Sbjct: 558 CKKNDRDAAFAIIDAMEELGLRPTVAIYSSII 589
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%)
Query: 258 PDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEF 317
P +TY +I+ +CK + D+A M K P FSTLING KR+D +E
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 318 YEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQPDKG 377
+ + G T TY ++ +C +D A +++EM CGV P+ T+ +L
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 378 SKNPRSLLGFPEN 390
K R E+
Sbjct: 128 KKELRKAFAILED 140
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 78/178 (43%), Gaps = 35/178 (19%)
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
M ++ + P +N ++D CK V+ A+ + D M +G
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGC------------------- 41
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
PDVVT+ LIN YCKAK+ D + + EM + ++ + ++T
Sbjct: 42 ----------------SPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 85
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
LI+G LD A + + + G AP+ T++ ++ C + A+ +++++++
Sbjct: 86 LIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 143
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 61/119 (51%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V +A + M G P+V F+ L++ CK+K V+ E+F +M RG+V + +YT
Sbjct: 25 RVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYT 84
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
L+ G+ Q +L ++ EM PD +T+ ++ C K+ +A ++Q+
Sbjct: 85 TLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 143
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 47/88 (53%)
Query: 286 MQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMR 345
M ++ P+ ++++I+G R+D+A + + G +P+ T++ ++ YC + R
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 346 MDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+D+ + EM + G+ N+ TY ++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIH 88
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 121/310 (39%), Gaps = 48/310 (15%)
Query: 72 STIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEAL 131
S ++ L +PE +A+ + L L F+WA +Q F H S+H I L
Sbjct: 124 SKFHETISKLPPRFTPEELADAIT-LEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKL 182
Query: 132 GKIRQFKVIWNLVED-MKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEV 190
G + ++ + ++V + R + + K+ AV F M
Sbjct: 183 GAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHM--------- 233
Query: 191 SDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVC-- 248
SK++E P +++Y IL + + N +N V
Sbjct: 234 ----------VTSKNLE-------------CRPTIRTYHILFKALLGRGNNSYINHVYME 270
Query: 249 ------REMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE-KNMMPSPHIFSTL 301
R+M EPDV L+ Y + ++A+ +H+M + P+ + L
Sbjct: 271 TVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYL 330
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
I+GL + R A E + K GF P +YN++V A+ S +DDA + + EM +
Sbjct: 331 IHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIE--- 387
Query: 362 GPNSRTYDII 371
N R D I
Sbjct: 388 --NGRVVDFI 395
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 2/139 (1%)
Query: 171 VKEAVETFEKMEK-YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
V +A+ F +M Y +P ++ L+ LC A+EL +M+ +G VP+ KSY
Sbjct: 304 VNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYN 363
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ ++ + + EM D ++Y L++ C+ KYDEA ++EK
Sbjct: 364 SLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREK 423
Query: 290 NMMPSPHIFSTLINGLGSD 308
++ + L+N L D
Sbjct: 424 QLVDRDS-YDKLVNVLHKD 441
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/374 (20%), Positives = 151/374 (40%), Gaps = 54/374 (14%)
Query: 50 HTLIPHTPHA-DKICKILSKSPNSTID---AALADLSVEVSPELVAEVLNKLSNAGV--L 103
H L+ + A ++ +I+S SP +D L +SV S LV +V+ N
Sbjct: 27 HHLVDRSETALHEVIRIVS-SPVGGLDDLEENLNQVSVSPSSNLVTQVIESCKNETSPRR 85
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDM-KQRKLLTRDTXXXXX 162
L FF W+ K G + F+ ++ L + + + L+ D+ K+ + + + T
Sbjct: 86 LLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVA 145
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV 222
K ++A+ F+ ++K+ + ++ LC V++A + H+ ++
Sbjct: 146 ETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMH--HHKDVI 203
Query: 223 P--DLKSYTILLEGWSQQQNLLRVNEVCREMK----------------CEC--------- 255
+L Y LL GWS Q+N+ V ++MK C C
Sbjct: 204 SGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPS 263
Query: 256 -----------------FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
+P ++Y IL++ + ++ E+ +M+ P +
Sbjct: 264 GLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSY 323
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
++ L R + + ++ GF PE Y ++G C R++ A ++ ++MK+
Sbjct: 324 YFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKR 383
Query: 359 CGVGPNSRTYDIIL 372
VG + YD+++
Sbjct: 384 SSVGGYGQVYDLLI 397
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 7/178 (3%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCK-------SKSVEKAQELFDKMRHRGLVP 223
VKEA + M+ G+ P++ FN L+ LC+ S V +A + +MR + P
Sbjct: 224 VKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQP 283
Query: 224 DLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFY 283
SY ILL + + + ++ +MK +PD +Y ++ ++ +
Sbjct: 284 TSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIV 343
Query: 284 HEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
EM E+ P + LI L +R++ AL+ +EK K + Y+ ++ C
Sbjct: 344 DEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLC 401
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 69/150 (46%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V EA+ +M Y ++P +N L+ L +++ V ++ ++ ++M+ G PD SY
Sbjct: 266 VPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYF 325
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++ + N++ EM F P+ Y LI C ++ + A+ + +M+ +
Sbjct: 326 VVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSS 385
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEK 320
+ ++ LI L ++ E +E+
Sbjct: 386 VGGYGQVYDLLIPKLCKGGNFEKGRELWEE 415
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 1/170 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K E + M+ G+ VS +N + LCK K ++A+ L D M G+ P+ +Y+
Sbjct: 237 KSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYS 296
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ G+ + + ++ + M +PD Y LI CK ++ A+ E EK
Sbjct: 297 HLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEK 356
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
N +PS I +L+NGL D +++EA E + K F +N V A
Sbjct: 357 NWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK-FTRNVELWNEVEAA 405
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 84/171 (49%), Gaps = 1/171 (0%)
Query: 172 KEAVETFEKMEK-YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
KEA + +M K YG++P++ +N+++ V C+S S + + +M +G+ P+ S+ +
Sbjct: 168 KEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGL 227
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++ G+ + V +V MK V TY I I + CK KK EA M
Sbjct: 228 MISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAG 287
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
M P+ +S LI+G ++ +EA + ++ G P++ Y ++ C
Sbjct: 288 MKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLC 338
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 111/249 (44%), Gaps = 3/249 (1%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRK--LLTRDTXXXXXXXXXXXXKVKEAVETFEK 180
+F A +E L + + F + NL++ + + L + + ++ F
Sbjct: 82 AFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANMLDHSLRVFRD 141
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKM-RHRGLVPDLKSYTILLEGWSQQQ 239
+EK+ + V N L+ +K ++A+ ++ +M + G+ PDL++Y +++ + +
Sbjct: 142 LEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESG 201
Query: 240 NLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFS 299
+ + EM+ + +P+ ++G++I+ + K DE M+++ + ++
Sbjct: 202 SASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYN 261
Query: 300 TLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQC 359
I L K+ EA + + G P T TY+ ++ +C ++A ++ M
Sbjct: 262 IRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNR 321
Query: 360 GVGPNSRTY 368
G P+S Y
Sbjct: 322 GCKPDSECY 330
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 133/310 (42%), Gaps = 33/310 (10%)
Query: 77 ALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHA---LIEALGK 133
L S ++ L++ VL + ++ LAL F++W + S F A +I L
Sbjct: 47 TLHQFSSSLTNPLISRVLREFRSSPKLALEFYNWVLRSNTVAKSENRFEASCVMIHLLVG 106
Query: 134 IRQF----KVIWNL--VEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLK 187
R+F ++ NL VE K L + + +++ G
Sbjct: 107 SRRFDDALSIMANLMSVEGEKLSPLHV----------------LSGLIRSYQAC---GSS 147
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEV 247
P+V F+ LV ++ + A E+ ++ R G + + + + R +V
Sbjct: 148 PDV--FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKV 205
Query: 248 CREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGS 307
+EM + +V T+ ++I ++CK K EA+ ++ M + + P+ F+ +I+G
Sbjct: 206 YKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACK 265
Query: 308 DKRLDEALEFYEKF---KANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPN 364
+ AL+ K N +P TYN+V+ +C + R+D A R+ +M + GV N
Sbjct: 266 TGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCN 325
Query: 365 SRTYDIILQP 374
RTY ++
Sbjct: 326 ERTYGALVDA 335
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 100/233 (42%), Gaps = 4/233 (1%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTR-DTXXXXXXXXXXXXKV 171
+ +GF S + + + L + + W + ++M + +T K+
Sbjct: 175 RAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKL 234
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRG---LVPDLKSY 228
EA+ F +M K G+ P V FN ++D CK+ + A +L KM + P+ +Y
Sbjct: 235 FEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTY 294
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
++ G+ + L + +M + + TYG L++AY +A DEA+ EM
Sbjct: 295 NSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTS 354
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYC 341
K ++ + I+++++ L + ++ A+ + + T VV C
Sbjct: 355 KGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLC 407
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 12/218 (5%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ A + M GL + F L+D K +E+A E++D M +L Y
Sbjct: 446 KLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYN 505
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ G S++ V M+ + D+VTY L+N K +EA +MQ++
Sbjct: 506 SIVNGLSKRGMAGAAEAVVNAMEIK----DIVTYNTLLNESLKTGNVEEADDILSKMQKQ 561
Query: 290 NMMPSPHI--FSTLINGL---GSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSM 344
+ S + F+ +IN L GS ++ E L+F + G P++ TY ++ ++
Sbjct: 562 DGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVE---RGVVPDSITYGTLITSFSKHR 618
Query: 345 RMDDAYRVVDEMKQCGVGPNSRTYDIILQPDKGSKNPR 382
+ + D + GV P+ Y I++P +N R
Sbjct: 619 SQEKVVELHDYLILQGVTPHEHIYLSIVRPLLDRENGR 656
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 84/193 (43%)
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
M K G+ + LVD ++ S ++A L D+M +GLV + Y ++ + +
Sbjct: 317 MVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGD 376
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
+ V R+M + + D T I++ C+ EAV F ++ EK ++ +T
Sbjct: 377 IEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNT 436
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
L++ DK+L A + G + + ++ ++ Y +++ A + D M +
Sbjct: 437 LMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMN 496
Query: 361 VGPNSRTYDIILQ 373
N Y+ I+
Sbjct: 497 KTSNLVIYNSIVN 509
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 130/325 (40%), Gaps = 37/325 (11%)
Query: 85 VSPELVA--EVLNKLSNAGVLALSFFHWAEKQK-GFKHSTESFHALIEALGKIRQFKVIW 141
VSP V V+N AG L L+ + K G + ++ AL++A G+
Sbjct: 287 VSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEAL 346
Query: 142 NLVEDMKQRKLLTRDTXXXXXXX-XXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVL 200
L ++M + L+ ++ A+ M ++ + +V L
Sbjct: 347 RLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGL 406
Query: 201 CKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDV 260
C++ V++A E ++ + LV D+ + L+ + + + L +++ M + D
Sbjct: 407 CRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDA 466
Query: 261 VTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGL------GSDKRLDEA 314
+++G LI+ Y K K + A+ Y M + N + I+++++NGL G+ + + A
Sbjct: 467 ISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNA 526
Query: 315 LEFYEKFKANGFAPET---------------------------PTYNAVVGAYCWSMRMD 347
+E + N E+ T+N ++ C +
Sbjct: 527 MEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYE 586
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIIL 372
A V+ M + GV P+S TY ++
Sbjct: 587 KAKEVLKFMVERGVVPDSITYGTLI 611
>AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:513607-515604 FORWARD
LENGTH=665
Length = 665
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 155/358 (43%), Gaps = 36/358 (10%)
Query: 60 DKICKILSKSP-NSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFK 118
+++CKI+ K + ++ L DL +E ++V VL KL AL FF W ++ FK
Sbjct: 219 NRVCKIVMKEVWGADVEKQLRDLKLEFKSDVVKMVLEKLDVDPRKALLFFRWIDESGSFK 278
Query: 119 HSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVET 177
H ++++A+ LGK + +++E+++ + +T +KEAVE
Sbjct: 279 HDEKTYNAMARVLGKEKFLDRFQHMIEEIRSAGYEMEMETYVRVSARFCQTKMIKEAVEL 338
Query: 178 FEKMEKYGLKPEVSDF------NKLVDVLCKSKSVEKAQELFDK-----MRHRGLVPDLK 226
FE + + +S+ + L+ + +K ++ +LF + + +VPD+
Sbjct: 339 FE----FAMAGSISNTPTPHCCSLLLKKIVTAKKLD--MDLFTRTLKAYTGNGNVVPDVM 392
Query: 227 SYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
+ L+ + NEV + M + P ++ + + K DEA + M
Sbjct: 393 LQHV-LKSLRSVDRFGQSNEVLKAMNEGGYVPSGDLQSVIASGLSRKGKKDEANELVNFM 451
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKAN-GFAPETPTYNAVVGAYCWSMR 345
+ ++L+ G K L+EA E ++K G + + +V AYC S +
Sbjct: 452 EASGNHLDDKAMASLVEGHCDAKDLEEASECFKKMIGKEGVSYAGYAFEKLVLAYCNSFQ 511
Query: 346 MDDAYRVVDEM-KQCGVGPNSRTYDIILQ--------PDKGSKNPRSLL------GFP 388
D Y++ E+ KQ + P TY I+++ D G + SLL GFP
Sbjct: 512 ARDVYKLFSELVKQNQLKPWHSTYKIMVRNLLMKKVARDGGFEEALSLLPMMRNHGFP 569
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 94/234 (40%), Gaps = 37/234 (15%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLV------------- 222
E K + G++ E S F L+D LC+ V+ A EL M ++
Sbjct: 165 EILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSV 224
Query: 223 ------------------------PDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEP 258
P L+ YT+++ + V V +MKC+ EP
Sbjct: 225 CKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEP 284
Query: 259 DVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFY 318
D+V Y I++ + Y +A + E+ + P + ++ INGL ++ AL+
Sbjct: 285 DLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMM 344
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
G P TYN ++ A + + A + EM+ GV NS T+DI++
Sbjct: 345 SSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMI 398
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 105/258 (40%), Gaps = 18/258 (6%)
Query: 86 SPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVE 145
S ELV E+L K GV + +F LI+AL +I + LV
Sbjct: 159 SLELVPEILVKACRMGV---------------RLEESTFGILIDALCRIGEVDCATELVR 203
Query: 146 DMKQRKLLTRDTXXXXXXXXXXXXK---VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCK 202
M Q ++ K + + E + K P + D+ ++ L +
Sbjct: 204 YMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVE 263
Query: 203 SKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVT 262
++ + ++M+ + PDL YTI+L+G ++ + +++ E+ PDV T
Sbjct: 264 GGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYT 323
Query: 263 YGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFK 322
Y + IN CK + A+ M + P+ ++ LI L L A +++ +
Sbjct: 324 YNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEME 383
Query: 323 ANGFAPETPTYNAVVGAY 340
NG + T++ ++ AY
Sbjct: 384 TNGVNRNSHTFDIMISAY 401
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 70/145 (48%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+A + F+++ GL P+V +N ++ LCK +E A ++ M G P++ +Y IL+
Sbjct: 304 KADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILI 363
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ + +L R + +EM+ + T+ I+I+AY + + A G E N+
Sbjct: 364 KALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVF 423
Query: 293 PSPHIFSTLINGLGSDKRLDEALEF 317
+I+ L +D+A+E
Sbjct: 424 VKSSRIEEVISRLCEKGLMDQAVEL 448
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 7/216 (3%)
Query: 174 AVETFEKMEKYGLKPE-------VSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLK 226
A+E +E + G +P VS FN L+ K L +KM +GL P +
Sbjct: 400 ALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRR 459
Query: 227 SYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
+ +L S+ ++ + M +P V++YG L++A K K YDEA ++ M
Sbjct: 460 HWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHM 519
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRM 346
+ + P+ + ++T+ + L ++ + ++ + G P T+NAV+ +
Sbjct: 520 IKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLS 579
Query: 347 DDAYRVVDEMKQCGVGPNSRTYDIILQPDKGSKNPR 382
AY MK V PN TY+++++ PR
Sbjct: 580 GVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPR 615
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 82/164 (50%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A++ F+ M G KP V + L+ L K K ++A +++ M G+ P+L +YT +
Sbjct: 477 AIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMAS 536
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ QQ ++ + +EM + EP VVT+ +I+ + A ++H M+ +N+ P
Sbjct: 537 VLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEP 596
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVV 337
+ + LI L +D + A E + K + G + Y+AVV
Sbjct: 597 NEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVV 640
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 91/215 (42%), Gaps = 2/215 (0%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
V KME GLKP+ +N ++ K+ A ++F M G P + SY LL
Sbjct: 442 GVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLS 501
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ + V M EP++ Y + + +K++ EM K + P
Sbjct: 502 ALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEP 561
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
S F+ +I+G + A E++ + K+ P TY ++ A + AY +
Sbjct: 562 SVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELH 621
Query: 354 DEMKQCGVGPNSRTYDIILQPDK--GSKNPRSLLG 386
+ + G+ +S+ YD +++ + G+ +LLG
Sbjct: 622 VKAQNEGLKLSSKPYDAVVKSAETYGATIDLNLLG 656
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 122/280 (43%), Gaps = 14/280 (5%)
Query: 98 SNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKI-RQFKVIWNLVEDMKQRKLLTRD 156
S A + L+FF W KQ + H +F ++ + K+ R++ I ++E +K +
Sbjct: 49 SPADLKTLNFFFWCAKQNNYFHDDRAFDHMVGVVEKLTREYYSIDRIIERLKISGCEIKP 108
Query: 157 TXXXXXXXXXXXXKVKE-AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDK 215
+ + A+E + M +G P N ++DV K V A E+F+
Sbjct: 109 RVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEG 168
Query: 216 MRHRGLVPDLKSYTILLEGWSQQQ---NLLRVNEVCREMKCECFEPDVVTYGILINAYCK 272
+R R S+ I L + + +L+ V V + M E F P+ +G ++ C+
Sbjct: 169 IRFRNFF----SFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCR 224
Query: 273 AKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPT 332
EA M + S +++S L++G +A++ + K G +P T
Sbjct: 225 TGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVT 284
Query: 333 YNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
Y +++ + +D+A+ V+ +++ G+ P DI+L
Sbjct: 285 YTSLIKGFVDLGMVDEAFTVLSKVQSEGLAP-----DIVL 319
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 75/142 (52%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V EA + M G+ V+ ++ LV +S +KA +LF+KM G P+L +YT
Sbjct: 228 VSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTS 287
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L++G+ + V +++ E PD+V ++I+ Y + +++EA + ++++
Sbjct: 288 LIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRK 347
Query: 291 MMPSPHIFSTLINGLGSDKRLD 312
++P + F+++++ L + D
Sbjct: 348 LVPDQYTFASILSSLCLSGKFD 369
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 96/234 (41%), Gaps = 32/234 (13%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V EA K++ GL P++ N ++ + E+A+++F + R LVPD ++
Sbjct: 298 VDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFAS 357
Query: 231 LL----------------EGWSQQQNLLRVN----------------EVCREMKCECFEP 258
+L G +L+ N +V M + F
Sbjct: 358 ILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFAL 417
Query: 259 DVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFY 318
D TY + ++A C+ A+ Y + ++ H S +I+ L + + A+ +
Sbjct: 418 DCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLF 477
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
++ + + +Y + + R+++AY + +MK+ G+ PN RTY I+
Sbjct: 478 KRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTII 531
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/249 (16%), Positives = 102/249 (40%), Gaps = 5/249 (2%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAV 175
GF +T + + +++ K+ + E ++ R + D +
Sbjct: 138 GFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFFSFDIALSHFCSRGGRGDLVGVK 197
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
++M G P F +++ + C++ V +A ++ M G+ + +++L+ G+
Sbjct: 198 IVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGF 257
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSP 295
+ + ++ +M P++VTY LI + DEA ++Q + + P
Sbjct: 258 FRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDI 317
Query: 296 HIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDE 355
+ + +I+ R +EA + + + P+ T+ +++ + C S + D R+
Sbjct: 318 VLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITH- 376
Query: 356 MKQCGVGPN 364
G+G +
Sbjct: 377 ----GIGTD 381
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 105/201 (52%), Gaps = 3/201 (1%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHR-GLVPDLKSYTILL 232
A + FE+M K V FN L+ SK + +ELF+++ + + PD+ SY L+
Sbjct: 128 AQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLI 187
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYG-ILINAYCKAKKYDEAVGFYHEMQEKNM 291
+ ++ +L + E++ + +PD+VT+ +L+++Y K +++ + +M EKN+
Sbjct: 188 KALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKG-QFELGEEIWAKMVEKNV 246
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
++ + GL ++ + E + + + KA+G P+ ++NA++ +MD+A
Sbjct: 247 AIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEA 306
Query: 352 VVDEMKQCGVGPNSRTYDIIL 372
E+ + G P+ T+ ++L
Sbjct: 307 WYKEIVKHGYRPDKATFALLL 327
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 116/249 (46%), Gaps = 6/249 (2%)
Query: 112 EKQKGFKH-STESFHALIEAL-GKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXX 169
E+QK ++ S E F A I +L GK F+ + E+M R
Sbjct: 98 EEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLS 157
Query: 170 KVKEAVETF--EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKS 227
K + VE E K +KP++ +N L+ LC+ S+ +A L D++ ++GL PD+ +
Sbjct: 158 KKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVT 217
Query: 228 Y-TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
+ T+LL + + Q L E+ +M + D+ TY + K E V + E+
Sbjct: 218 FNTLLLSSYLKGQFELG-EEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGEL 276
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRM 346
+ + P F+ +I G ++ ++DEA +Y++ +G+ P+ T+ ++ A C +
Sbjct: 277 KASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDF 336
Query: 347 DDAYRVVDE 355
+ A + E
Sbjct: 337 ESAIELFKE 345
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 103/238 (43%), Gaps = 2/238 (0%)
Query: 118 KHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXK--VKEAV 175
K S SF+AL+ A ++F V+ L ++ + + D K + EAV
Sbjct: 141 KRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAV 200
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
+++E GLKP++ FN L+ E +E++ KM + + D+++Y L G
Sbjct: 201 ALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGL 260
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSP 295
+ + + + E+K +PDV ++ +I K DEA +Y E+ + P
Sbjct: 261 ANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDK 320
Query: 296 HIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
F+ L+ + + A+E +++ + + T +V + ++A +V
Sbjct: 321 ATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIV 378
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 94/206 (45%), Gaps = 4/206 (1%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
E E+ +KY + +++ + K+ E AQ++F++M +R + S+ LL +
Sbjct: 95 EILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAY 154
Query: 236 SQQQNLLRVNEVCREMKCE-CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPS 294
+ V E+ E+ + +PD+V+Y LI A C+ EAV E++ K + P
Sbjct: 155 RLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPD 214
Query: 295 PHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD 354
F+TL+ + + E + K A + TYNA + + + +
Sbjct: 215 IVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFG 274
Query: 355 EMKQCGVGPNSRTYDIILQPDKGSKN 380
E+K G+ P+ +++ ++ +GS N
Sbjct: 275 ELKASGLKPDVFSFNAMI---RGSIN 297
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 114/268 (42%), Gaps = 36/268 (13%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVK 172
K KG S+E + LI A + R+ + L ++ +KLL
Sbjct: 275 KDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLK------------------ 316
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
PE+ K+V + + ++E E+ MR L ++
Sbjct: 317 --------------DPEMC--LKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIV 360
Query: 233 EGWSQQQNLLRVNEVCR-EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
G+S+Q+ +V MK EC E VTY I INAYC+ +KY++A + EM +K
Sbjct: 361 NGFSKQRGFAEAVKVYEWAMKEEC-EAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGF 419
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
+S +++ G +RL +A+ K K G P YN+++ + +M + A +
Sbjct: 420 DKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEK 479
Query: 352 VVDEMKQCGVGPNSRTYDIILQPDKGSK 379
+ EMK+ V P+ +Y ++ SK
Sbjct: 480 IWKEMKRAKVLPDKVSYTSMISAYNRSK 507
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 97/200 (48%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EAV+ +E K + + ++ C+ + KA+ LFD+M +G + +Y+ ++
Sbjct: 371 EAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIM 430
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ + + + L + +MK +P++ Y LI+ + +A A + EM+ ++
Sbjct: 431 DMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVL 490
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
P ++++I+ K L+ +E Y++F+ N + +VG + + R+D+ R+
Sbjct: 491 PDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRL 550
Query: 353 VDEMKQCGVGPNSRTYDIIL 372
+ +MK G ++R Y L
Sbjct: 551 LQDMKVEGTRLDARLYSSAL 570
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K +A F++M K G V ++ ++D+ K++ + A L KM+ RG P++ Y
Sbjct: 403 KYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYN 462
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L++ + +L R ++ +EMK PD V+Y +I+AY ++K+ + V Y E +
Sbjct: 463 SLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMN 522
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
+ ++ R+DE + + K G + Y++ + A
Sbjct: 523 RGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNA 572
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 74/136 (54%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++ +AV KM++ G KP + +N L+D+ ++ + +A++++ +M+ ++PD SYT
Sbjct: 438 RLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYT 497
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ +++ + L R E+ +E + + D GI++ + K + DE + +M+ +
Sbjct: 498 SMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVE 557
Query: 290 NMMPSPHIFSTLINGL 305
++S+ +N L
Sbjct: 558 GTRLDARLYSSALNAL 573
>AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5213290-5215296 FORWARD
LENGTH=668
Length = 668
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 154/355 (43%), Gaps = 29/355 (8%)
Query: 60 DKICKILSKSP-NSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFK 118
D++CKI+ K ++ + DL+VE +LV ++ +L AL FF W ++ FK
Sbjct: 225 DRVCKIVMKEEWGDDVEKRVRDLNVEFKSDLVKMIVERLDVEPRKALLFFRWIDESDLFK 284
Query: 119 HSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVET 177
H ++++A+ LGK + N+V +M+ + +T +KEAV+
Sbjct: 285 HDEKTYNAMARVLGKEKFLDRFQNIVVEMRSAGYEVEIETYVRVSTRFCQTKLIKEAVDL 344
Query: 178 FE---KMEKYGLKPEVSDFNKLVDVLCKSKSVE-----KAQELFDKMRHRGLVPDLKSYT 229
FE P F L+ + +K ++ +A +++ K + LKS
Sbjct: 345 FEIAMAGSSSSNNPTPHCFCLLLKKIVTAKILDMDLFSRAVKVYTKNGNALTDSLLKS-- 402
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+L+ + + NE+ +EMK + P ++ ++ + K DEA F M+
Sbjct: 403 -VLKSLRSVDRVEQSNELLKEMKRGGYVPSGDMQSMIASSLSRKGKKDEADEFVDFMESS 461
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKAN-GFAPETPTYNAVVGAYCWSMRMDD 348
++L+ G LDEAL +EK N G + ++ +V AYC ++ D
Sbjct: 462 GNNLDDKAMASLVEGYCDSGNLDEALVCFEKMVGNTGVSYADYSFEKLVLAYCNKNQVRD 521
Query: 349 AYRVVD-EMKQCGVGPNSRTYDII--------LQPDKGSKNPRSLL------GFP 388
AY+++ ++ + + P TY + + D G + SLL GFP
Sbjct: 522 AYKLLSAQVTKNQLKPRHSTYKSLVTNLLTKKIARDGGFEEALSLLPIMKDHGFP 576
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 142/358 (39%), Gaps = 57/358 (15%)
Query: 62 ICKILSK-SPNSTIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHS 120
+ I S+ S I L V +S +L +VL KL + +A SFF W ++ + S
Sbjct: 90 VIDIFSRLSGEDEIRKELESSGVVISQDLALKVLRKLESNPDVAKSFFQWIKEASPEELS 149
Query: 121 TESFHALIEALGKIRQFKVIWNLVEDMKQ-----------------------------RK 151
+++++ ++ LG W LV+ MK+ RK
Sbjct: 150 SKNYNMMLRILGGNGLVDEFWGLVDVMKKKGHGLSANVRDKVGDKFQKDGLESDLLRLRK 209
Query: 152 LLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYG--LKPEVSDFN-----KLVDVLCKSK 204
L T D V + V E++G ++ V D N LV ++ +
Sbjct: 210 LFTSDC------LDNSAENVCDRVCKIVMKEEWGDDVEKRVRDLNVEFKSDLVKMIVERL 263
Query: 205 SVE--KAQELFDKMRHRGLVP-DLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVV 261
VE KA F + L D K+Y + +++ L R + EM+ +E ++
Sbjct: 264 DVEPRKALLFFRWIDESDLFKHDEKTYNAMARVLGKEKFLDRFQNIVVEMRSAGYEVEIE 323
Query: 262 TYGILINAYCKAKKYDEAVGFYH---EMQEKNMMPSPHIFSTLINGLGSDKRLD-----E 313
TY + +C+ K EAV + + P+PH F L+ + + K LD
Sbjct: 324 TYVRVSTRFCQTKLIKEAVDLFEIAMAGSSSSNNPTPHCFCLLLKKIVTAKILDMDLFSR 383
Query: 314 ALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDII 371
A++ Y K NG A +V+ + R++ + ++ EMK+ G P+ +I
Sbjct: 384 AVKVYTK---NGNALTDSLLKSVLKSLRSVDRVEQSNELLKEMKRGGYVPSGDMQSMI 438
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 122/289 (42%), Gaps = 40/289 (13%)
Query: 89 LVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMK 148
L+ E L K S+ + L F W +KQ+ + + LI +GK Q ++
Sbjct: 102 LLFEELGK-SDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRM--------- 151
Query: 149 QRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLC----KSK 204
A+ F +M+ G +P+ S +N L+ K+K
Sbjct: 152 -------------------------AMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAK 186
Query: 205 SVEKAQELFDKMRH-RGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTY 263
++EK + DKM+ P++ +Y ILL ++Q + +VN + +++ PDV T+
Sbjct: 187 ALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTF 246
Query: 264 GILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKA 323
+++AY K E M+ P F+ LI+ G + ++ + ++
Sbjct: 247 NGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMR 306
Query: 324 NGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+ P PT+N+++ Y + +D A V +M P+ TY+ ++
Sbjct: 307 SKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMI 355
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 6/192 (3%)
Query: 170 KVKEAVETFEKMEKYGLKPE-----VSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPD 224
K EA++ F+ ++K P + FN +V+ C E+A E+F +M PD
Sbjct: 325 KFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPD 384
Query: 225 LKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYH 284
S+ L+ + L ++ EM+ + +PD TYG+L++ K K DE +Y
Sbjct: 385 TLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYK 444
Query: 285 EMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSM 344
M E N+ P+ +++ L + L +LD+A F++ + + Y ++ A +
Sbjct: 445 TMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFD-MMVSKLKMDDEAYKFIMRALSEAG 503
Query: 345 RMDDAYRVVDEM 356
R+D+ ++VDEM
Sbjct: 504 RLDEMLKIVDEM 515
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 103/232 (44%), Gaps = 46/232 (19%)
Query: 186 LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVN 245
L P ++ F LV L + ++EKA E+ + M +G V D Y+ L+ G + + V
Sbjct: 197 LNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVL 256
Query: 246 EVCREMK-----------------------------CECFEPDV----------VTYGIL 266
++ +E+K EC+E V + Y +
Sbjct: 257 KLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYV 316
Query: 267 INAYCKAKKYDEAVGFYHEMQEKNMMPSPHI------FSTLINGLGSDKRLDEALEFYEK 320
+ A + K+DEA+ + ++ K P H+ F+ ++NG + + +EA+E + +
Sbjct: 317 LEALSENGKFDEALKLFDAVK-KEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQ 375
Query: 321 FKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+P+T ++N ++ C + + +A ++ EM++ V P+ TY +++
Sbjct: 376 MGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLM 427
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 51/108 (47%)
Query: 262 TYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKF 321
T+ +++N YC K++EA+ + +M + P F+ L+N L ++ L EA + Y +
Sbjct: 352 TFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEM 411
Query: 322 KANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYD 369
+ P+ TY ++ ++D+ M + + PN Y+
Sbjct: 412 EEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYN 459
>AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26596207-26598192 FORWARD
LENGTH=661
Length = 661
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 113/264 (42%), Gaps = 10/264 (3%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXX 162
A SFF W Q GF H + ++ L + Q +++ L+ ++ + L T
Sbjct: 394 AWSFFCWVAIQPGFTHDAYTIERMMAMLARNGQVELVDKLISKVRIEGIKLPFSTIRLII 453
Query: 163 XXXXXXXKVKEAVETFEKMEKYGLKPEVSDFN------KLVDVLCKSKSVEKAQELFDKM 216
K + A++ F E L +SDFN L+ L K K +A E + M
Sbjct: 454 DLYGISKKPEAAIKVFN--EDRTLCGSISDFNLMLLYSSLLRTLTKCKRNAEALETLEDM 511
Query: 217 RHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKY 276
G+ PD+++++ L+ ++ Q + V + ++ EPD +L+ AYC+ ++
Sbjct: 512 MLTGVSPDIQTFSGLMYHFALQGEIQTVERLFSMVRQIGLEPDPYMLKLLVQAYCRCERS 571
Query: 277 DEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKF-KANGFAPETPTYNA 335
A + +M++ N+MP L+ L +++ EA E + + N +
Sbjct: 572 VLAYRVFQDMKDSNLMPDRETKELLVKSLWREEKRKEAAAVEESYEEENDNKNSSNVLRL 631
Query: 336 VVGAYCWSMRMDDAYRVVDEMKQC 359
+ + W++ D RV + + C
Sbjct: 632 ALKGHVWTISSTDISRVYNLYRDC 655
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 122/289 (42%), Gaps = 40/289 (13%)
Query: 89 LVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMK 148
L+ E L K S+ + L F W +KQ+ + + LI +GK Q ++
Sbjct: 102 LLFEELGK-SDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRM--------- 151
Query: 149 QRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLC----KSK 204
A+ F +M+ G +P+ S +N L+ K+K
Sbjct: 152 -------------------------AMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAK 186
Query: 205 SVEKAQELFDKMRH-RGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTY 263
++EK + DKM+ P++ +Y ILL ++Q + +VN + +++ PDV T+
Sbjct: 187 ALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTF 246
Query: 264 GILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKA 323
+++AY K E M+ P F+ LI+ G + ++ + ++
Sbjct: 247 NGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMR 306
Query: 324 NGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+ P PT+N+++ Y + +D A V +M P+ TY+ ++
Sbjct: 307 SKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMI 355
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 4/208 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKS--VEKAQELFDKMRHRGLVPDLKS 227
+V +A+E K+ + GLK ++ + +S S +E+ + L + RG +P L S
Sbjct: 241 EVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDS 300
Query: 228 YTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYH-EM 286
Y+ + ++ L+ EV M+ + FEP YG + A C+A K EAV + EM
Sbjct: 301 YSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEM 360
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKF-KANGFAPETPTYNAVVGAYCWSMR 345
+ + +P+ +++ LI GL D + EA+ + +K K TY +V C +
Sbjct: 361 MQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQ 420
Query: 346 MDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+A +V++EM P TY ++++
Sbjct: 421 FLEASQVMEEMLIKSHFPGVETYHMMIK 448
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 146/369 (39%), Gaps = 81/369 (21%)
Query: 85 VSPELVAEVLNKLSNAGVLALSFFHWA-EKQKGFKHSTESFHALIEALGKIRQFKVIWNL 143
++P L++++L K N V AL F A E+ + H+ + +I+ LGK + + +
Sbjct: 10 LTPSLLSQILKKQKNP-VTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYV 68
Query: 144 VEDMKQRKLLTRDTX-XXXXXXXXXXXKVKEAVETFEKMEK------------------- 183
+E MK+ +D+ ++++A+ F+ + +
Sbjct: 69 IERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVK 128
Query: 184 ---------------YG--LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLK 226
YG + ++ N L+ VLC+ + A ++F +M ++G PD
Sbjct: 129 ESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRD 188
Query: 227 SYTILLEGWSQQQNLLRVNEVCREMKCECFE----PDVVTYGILINAYCKAKKYDEAVGF 282
SY IL++G+ + L + M + D+V Y IL++A C A + D+A+
Sbjct: 189 SYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEI 248
Query: 283 ---------------YHEMQE----------------------KNMMPSPHIFSTLINGL 305
YH ++ + +P +S + L
Sbjct: 249 LGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDL 308
Query: 306 GSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD-EMKQCGVGPN 364
+ +L E E ++ GF P Y A V A C + ++ +A V++ EM Q P
Sbjct: 309 FEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPT 368
Query: 365 SRTYDIILQ 373
Y+++++
Sbjct: 369 VGVYNVLIK 377
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 4/135 (2%)
Query: 170 KVKEAVETFEK--MEKYGLKPEVSDFNKLVDVLCK-SKSVEKAQELFDKMRHRGLVPDLK 226
K+KEAV K M+ + L P V +N L+ LC KS+E L + V + +
Sbjct: 348 KLKEAVSVINKEMMQGHCL-PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEE 406
Query: 227 SYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
+Y L++G + L ++V EM + P V TY ++I C + EAV + EM
Sbjct: 407 TYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEM 466
Query: 287 QEKNMMPSPHIFSTL 301
++M+P ++ L
Sbjct: 467 VSQDMVPESSVWKAL 481
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 4/208 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKS--VEKAQELFDKMRHRGLVPDLKS 227
+V +A+E K+ + GLK ++ + +S S +E+ + L + RG +P L S
Sbjct: 241 EVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDS 300
Query: 228 YTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYH-EM 286
Y+ + ++ L+ EV M+ + FEP YG + A C+A K EAV + EM
Sbjct: 301 YSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEM 360
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKF-KANGFAPETPTYNAVVGAYCWSMR 345
+ + +P+ +++ LI GL D + EA+ + +K K TY +V C +
Sbjct: 361 MQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQ 420
Query: 346 MDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+A +V++EM P TY ++++
Sbjct: 421 FLEASQVMEEMLIKSHFPGVETYHMMIK 448
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 146/369 (39%), Gaps = 81/369 (21%)
Query: 85 VSPELVAEVLNKLSNAGVLALSFFHWA-EKQKGFKHSTESFHALIEALGKIRQFKVIWNL 143
++P L++++L K N V AL F A E+ + H+ + +I+ LGK + + +
Sbjct: 10 LTPSLLSQILKKQKNP-VTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYV 68
Query: 144 VEDMKQRKLLTRDTX-XXXXXXXXXXXKVKEAVETFEKMEK------------------- 183
+E MK+ +D+ ++++A+ F+ + +
Sbjct: 69 IERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVK 128
Query: 184 ---------------YG--LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLK 226
YG + ++ N L+ VLC+ + A ++F +M ++G PD
Sbjct: 129 ESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRD 188
Query: 227 SYTILLEGWSQQQNLLRVNEVCREMKCECFE----PDVVTYGILINAYCKAKKYDEAVGF 282
SY IL++G+ + L + M + D+V Y IL++A C A + D+A+
Sbjct: 189 SYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEI 248
Query: 283 ---------------YHEMQE----------------------KNMMPSPHIFSTLINGL 305
YH ++ + +P +S + L
Sbjct: 249 LGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDL 308
Query: 306 GSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD-EMKQCGVGPN 364
+ +L E E ++ GF P Y A V A C + ++ +A V++ EM Q P
Sbjct: 309 FEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPT 368
Query: 365 SRTYDIILQ 373
Y+++++
Sbjct: 369 VGVYNVLIK 377
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 4/135 (2%)
Query: 170 KVKEAVETFEK--MEKYGLKPEVSDFNKLVDVLCK-SKSVEKAQELFDKMRHRGLVPDLK 226
K+KEAV K M+ + L P V +N L+ LC KS+E L + V + +
Sbjct: 348 KLKEAVSVINKEMMQGHCL-PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEE 406
Query: 227 SYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
+Y L++G + L ++V EM + P V TY ++I C + EAV + EM
Sbjct: 407 TYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEM 466
Query: 287 QEKNMMPSPHIFSTL 301
++M+P ++ L
Sbjct: 467 VSQDMVPESSVWKAL 481
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 94/180 (52%), Gaps = 12/180 (6%)
Query: 193 FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK 252
+N L+ L + K + +A ELF+KM + D+ S+T +++G+S + + + C E+
Sbjct: 344 WNSLITGLVQRKQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEISK----CVELF 395
Query: 253 CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD 312
E D +T+ +I+A+ Y+EA+ ++H+M +K + P+ + FS++++ S L
Sbjct: 396 GMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLI 455
Query: 313 EALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
E L+ + + + N++V YC +DAY++ C PN +Y+ ++
Sbjct: 456 EGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIF----SCISEPNIVSYNTMI 511
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 98/204 (48%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+ +EA ++M+ G P + ++ L++ +KA EL +M+ GLVP+ T
Sbjct: 252 RSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMT 311
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
LL+ + + R E+ E++ + + + Y +L++ KA K +EA + +M+ K
Sbjct: 312 TLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGK 371
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ + S +I+ L KR EA E + + N ++ AYC + M+
Sbjct: 372 GVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESV 431
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
R++ +M + V P+ T+ I+++
Sbjct: 432 MRMMKKMDEQAVSPDYNTFHILIK 455
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 1/204 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKS-VEKAQELFDKMRHRGLVPDLKSY 228
K+ ++ F++M++ GLKP+V +N L+ K K+ KA EL ++ H G+ D Y
Sbjct: 181 KLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMY 240
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
+L + ++MK E P++ Y L+N+Y Y +A EM+
Sbjct: 241 GTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKS 300
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDD 348
++P+ + +TL+ D + E + ++ G+A Y ++ + ++++
Sbjct: 301 IGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEE 360
Query: 349 AYRVVDEMKQCGVGPNSRTYDIIL 372
A + D+MK GV + I++
Sbjct: 361 ARSIFDDMKGKGVRSDGYANSIMI 384
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 92/203 (45%), Gaps = 1/203 (0%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V +A+E ++ + K V N ++ L K+ ++ +LFD+M+ GL PD+ +Y
Sbjct: 147 VSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNT 206
Query: 231 LLEGWSQQQNLL-RVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
LL G + +N + E+ E+ + D V YG ++ + +EA F +M+ +
Sbjct: 207 LLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVE 266
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
P+ + +S+L+N +A E + K+ G P ++ Y D +
Sbjct: 267 GHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRS 326
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
++ E++ G N Y +++
Sbjct: 327 RELLSELESAGYAENEMPYCMLM 349
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 121/274 (44%), Gaps = 13/274 (4%)
Query: 89 LVAEVLNKLSNAGVLALSFFHWAEK------QKGFKHSTESFHALIEALGKIRQFKVIWN 142
VA ++N G+ F A+K ++ K + SF+AL+ A ++F ++
Sbjct: 108 FVARIINLYGRVGM-----FENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEG 162
Query: 143 LVEDMKQRKLLTRDTXXXXXXXXXXXXK--VKEAVETFEKMEKYGLKPEVSDFNKLVDVL 200
+ +++ + + D K EAV +++E GLKP+ FN L+
Sbjct: 163 IFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHES 222
Query: 201 CKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDV 260
E+ ++++ +M + + D++SY L G + + + + ++K +PDV
Sbjct: 223 YTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDV 282
Query: 261 VTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEK 320
T+ +I + K DEA+ +Y E+++ P +F++L+ + L+ A E ++
Sbjct: 283 FTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKE 342
Query: 321 FKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVD 354
A + VV A + D+A +V+
Sbjct: 343 IFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVE 376
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 97/200 (48%), Gaps = 1/200 (0%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHR-GLVPDLKSYTILL 232
A + F++M + K FN L++ SK + + +F ++ + + PD+ SY L+
Sbjct: 125 AQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLI 184
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+G + + + E++ + +PD +T+ IL++ K++E + M EKN+
Sbjct: 185 KGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVK 244
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
++ + GL + + +E + ++K K N P+ T+ A++ + ++D+A
Sbjct: 245 RDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITW 304
Query: 353 VDEMKQCGVGPNSRTYDIIL 372
E+++ G P ++ +L
Sbjct: 305 YKEIEKNGCRPLKFVFNSLL 324
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 71/157 (45%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K +E + + +M + +K ++ +N + L E+ LFDK++ L PD+ ++T
Sbjct: 227 KFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFT 286
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
+++G+ + L +E++ P + L+ A CKA + A E+ K
Sbjct: 287 AMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAK 346
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGF 326
++ + +++ L + DEA E E K N +
Sbjct: 347 RLLVDEAVLQEVVDALVKGSKQDEAEEIVELAKTNDY 383
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 90/203 (44%), Gaps = 1/203 (0%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQE-LFDKMRHRGLVPDLKSYTI 230
K+A++TF M+ YG K V FN + VL + + E L D G+ D S+ I
Sbjct: 123 KQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNI 182
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++ + + L REM+ PDVVTY LI+A K ++ G ++ M K
Sbjct: 183 AIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKG 242
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
P+ F+ I L + +R +A + P++ TYN V+ + + D A
Sbjct: 243 CKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAE 302
Query: 351 RVVDEMKQCGVGPNSRTYDIILQ 373
RV M G PN + Y ++
Sbjct: 303 RVYTAMHGKGYKPNLKIYQTMIH 325
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 96/241 (39%), Gaps = 2/241 (0%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXX--XXXKVKE 173
G K S +SF+A ++ L IW + D + + D +
Sbjct: 136 GCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDG 195
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A +MEK GL P+V + L+ L K + L++ M +G P+L ++ + ++
Sbjct: 196 AYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQ 255
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
++ N++ M EPD +TY ++I + A+ D A Y M K P
Sbjct: 256 FLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKP 315
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ I+ T+I+ L D A + + P T ++ ++D A ++
Sbjct: 316 NLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIM 375
Query: 354 D 354
+
Sbjct: 376 E 376
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 79/191 (41%)
Query: 183 KYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLL 242
KYG+ + FN + C+ ++ A +M GL PD+ +YT L+ + + +
Sbjct: 170 KYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCV 229
Query: 243 RVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLI 302
N + M + +P++ T+ + I ++ +A M + + P ++ +I
Sbjct: 230 IGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVI 289
Query: 303 NGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVG 362
G + D A Y G+ P Y ++ C + D AY + + +
Sbjct: 290 KGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWY 349
Query: 363 PNSRTYDIILQ 373
PN T +++L+
Sbjct: 350 PNLDTVEMLLK 360
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 122/293 (41%), Gaps = 17/293 (5%)
Query: 87 PELVAEVLNKL--SNAGVLALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLV 144
P+ V E L++ N AL F+ KQ ++ +++ L + LG +Q L
Sbjct: 108 PKAVLEALDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLF 167
Query: 145 EDMKQRKLL-TRDTXXXXXXXXXXXXKVKEAVETFEKMEKYG-LKPEVSDFNKLVDVLCK 202
E M L T D + +A T E M+ KP+V F L+ CK
Sbjct: 168 EVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCK 227
Query: 203 SKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFE-PDVV 261
+ + + +M + G+ +Y +++G+ + + V +M + PDV
Sbjct: 228 LGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVC 287
Query: 262 TYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSD---KRLDEALEFY 318
T +I +Y + + +Y Q + P F+ LI G K++ ++F
Sbjct: 288 TLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFM 347
Query: 319 EKFKANGFAPETPTYNAVVGAYCWSMR---MDDAYRVVDEMKQCGVGPNSRTY 368
EK F+ T TYN V+ + + R MDD +R +MK GV PNS TY
Sbjct: 348 EK---RFFSLTTVTYNIVIETFGKAGRIEKMDDVFR---KMKYQGVKPNSITY 394
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 112/257 (43%), Gaps = 8/257 (3%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR-----KLLTRDTXXXXXXXXXXXXK 170
G ST +++ +I+ GK F+ + +++ DM + + T ++ K
Sbjct: 245 GVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRK 304
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
++ F+ M G++P+++ FN L+ K+ +K + D M R +Y I
Sbjct: 305 MESWYSRFQLM---GVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNI 361
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
++E + + + ++++V R+MK + +P+ +TY L+NAY KA + ++ +
Sbjct: 362 VIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSD 421
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
++ F+ +IN G L E Y + + P+ T+ ++ Y D
Sbjct: 422 VVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQ 481
Query: 351 RVVDEMKQCGVGPNSRT 367
+ +M +G T
Sbjct: 482 ELEKQMISSDIGKKRLT 498
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
Q+ L++ + R K +EP TY L K+ D+A + M + + P+ ++
Sbjct: 125 QSALKIFNLLR--KQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVY 182
Query: 299 STLINGLGSDKRLDEALEFYEKFKA-NGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
++LI+ G + LD+A E K+ + P+ T+ ++ C R D +V EM
Sbjct: 183 TSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMS 242
Query: 358 QCGVGPNSRTYDIIL 372
GVG ++ TY+ I+
Sbjct: 243 YLGVGCSTVTYNTII 257
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 89/212 (41%), Gaps = 12/212 (5%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
KV E V +++ +SD++KL+ + K +E + + KM G+ PD+ + T
Sbjct: 369 KVAEGV-----LDEKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTAT 423
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L+ +S+ N R E +K PD Y +I Y A K EMQ K
Sbjct: 424 ALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAK 483
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETP----TYNAVVGAYCWSMR 345
+ S ++ L+ + A + +A + P Y+ V AY + +
Sbjct: 484 ELKASEEVYMALLRAYAQMGDANGAAGISSSMQ---YASDGPLSFEAYSLFVEAYGKAGQ 540
Query: 346 MDDAYRVVDEMKQCGVGPNSRTYDIILQPDKG 377
+D A DEM++ G P+ + +++ KG
Sbjct: 541 VDKAKSNFDEMRKLGHKPDDKCIANLVRAYKG 572
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 100/252 (39%), Gaps = 2/252 (0%)
Query: 114 QKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXXXXXXKVK 172
+K F S + LI K + + +++ M Q + T +
Sbjct: 377 EKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFE 436
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
A E FE ++ YGL+P+ + ++ + + + L +M+ + L + Y LL
Sbjct: 437 RATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALL 496
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEP-DVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++Q + + M+ P Y + + AY KA + D+A + EM++
Sbjct: 497 RAYAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGH 556
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P + L+ + LD+AL + + +G TY +V +++A +
Sbjct: 557 KPDDKCIANLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQ 616
Query: 352 VVDEMKQCGVGP 363
++ ++ Q G P
Sbjct: 617 LLVKISQLGEAP 628
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 8/206 (3%)
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEV 247
P ++++N+L++ LC V A +L MR+RG +PD+ ++T L+ G+ + + L ++V
Sbjct: 160 PSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKV 219
Query: 248 CREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM-----QEKNMMPSPHIFSTLI 302
EM+ P+ +T +LI + K + + E+ E + F+ L+
Sbjct: 220 FDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLV 279
Query: 303 NGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVG 362
+ + + ++ E E Y ++ + C R A R+V MK G+
Sbjct: 280 DSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLK 339
Query: 363 PNSRTYDIILQ---PDKGSKNPRSLL 385
P +Y+ I+ D G LL
Sbjct: 340 PRRTSYNAIIHGLCKDGGCMRAYQLL 365
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 107/255 (41%), Gaps = 5/255 (1%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXX-XXXKVKEAVETFEKM 181
++ +I++L + R+ +V MK + L R T A + E+
Sbjct: 309 AYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEG 368
Query: 182 EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNL 241
++ P + L++ LCK KA+ + + M + + Y I L G N
Sbjct: 369 SEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNP 428
Query: 242 LRV-NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE-KNMMPSPHIFS 299
+ N + ++ +C PD T +IN CK + D+A+ +M K P +
Sbjct: 429 TEILNVLVSMLQGDC-RPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLN 487
Query: 300 TLINGLGSDKRLDEALEFYEKFK-ANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
T++ GL + R +EAL+ + N P YNAV+ + D+A V ++++
Sbjct: 488 TVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEK 547
Query: 359 CGVGPNSRTYDIILQ 373
V +S TY II+
Sbjct: 548 ASVTADSTTYAIIID 562
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 87/200 (43%), Gaps = 33/200 (16%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EA+ + + G +P+ + + ++ LC + ++A F G +PD ++ +++
Sbjct: 73 EALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVII 132
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
++ V T G++ +GF +K +
Sbjct: 133 ARLLYSRS------------------PVSTLGVI----------HRLIGF-----KKEFV 159
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRV 352
PS ++ L+N L + R+ +A + + G P+ T+ ++G YC ++ A++V
Sbjct: 160 PSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKV 219
Query: 353 VDEMKQCGVGPNSRTYDIIL 372
DEM+ CG+ PNS T +++
Sbjct: 220 FDEMRVCGIRPNSLTLSVLI 239
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 107/257 (41%), Gaps = 42/257 (16%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
+V +A + M G P+V F L+ C+ + +E A ++FD+MR G+ P+ + +
Sbjct: 177 RVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLS 236
Query: 230 ILLEGWSQQQN------LLR----------------------VNEVCREMK--------- 252
+L+ G+ + ++ L++ V+ +CRE
Sbjct: 237 VLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAE 296
Query: 253 ----CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSD 308
CE + YG +I++ C+ ++ A + M+ K + P ++ +I+GL D
Sbjct: 297 NMSLCESVNVEF-AYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKD 355
Query: 309 KRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
A + E+ F P TY ++ + C + A V++ M + +R Y
Sbjct: 356 GGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIY 415
Query: 369 DIILQPDKGSKNPRSLL 385
+I L+ NP +L
Sbjct: 416 NIYLRGLCVMDNPTEIL 432
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 8/205 (3%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDK-MRHRGLVPDLKSYTIL 231
E + M + +P+ N +++ LCK V+ A ++ D M + PD + +
Sbjct: 430 EILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTV 489
Query: 232 LEGWSQQ----QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
+ G Q + L +N V E K +P VV Y +I K K DEA+ + +++
Sbjct: 490 MCGLLAQGRAEEALDVLNRVMPENK---IKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLE 546
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
+ ++ ++ +I+GL ++D A +F++ + Y A + C S +
Sbjct: 547 KASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLS 606
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIIL 372
DA + ++ G PN Y+ ++
Sbjct: 607 DACHFLYDLADSGAIPNVVCYNTVI 631
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 88/204 (43%), Gaps = 2/204 (0%)
Query: 170 KVKEAVETFEKMEKYGL-KPEVSDFNKLVDVLCKSKSVEKAQELFDK-MRHRGLVPDLKS 227
+V +A++ + M P+ N ++ L E+A ++ ++ M + P + +
Sbjct: 462 RVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVA 521
Query: 228 YTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
Y ++ G + V +++ D TY I+I+ C K D A F+ ++
Sbjct: 522 YNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVI 581
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
+ +++ + GL L +A F +G P YN V+ S
Sbjct: 582 WPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKR 641
Query: 348 DAYRVVDEMKQCGVGPNSRTYDII 371
+AY++++EM++ G P++ T+ I+
Sbjct: 642 EAYQILEEMRKNGQAPDAVTWRIL 665
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 4/169 (2%)
Query: 210 QELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINA 269
QE+F KMR G + + + S+ E+ ++K + PDVV + ++ A
Sbjct: 185 QEIFHKMRTEGFTNEA---VKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEA 241
Query: 270 YCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSD-KRLDEALEFYEKFKANGFAP 328
Y A + E + + M + P+ + +S LI GL +D K +A ++ + NG +P
Sbjct: 242 YANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSP 301
Query: 329 ETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQPDKG 377
TY AV A+ + + A ++ EMK G P+ + L+ +G
Sbjct: 302 NAATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEKAVREALEYKRG 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 4/155 (2%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
E F KM G E K+ D L K +A ELF +++ + +PD+ ++T ++E +
Sbjct: 186 EIFHKMRTEGFTNEAV---KMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAY 242
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAY-CKAKKYDEAVGFYHEMQEKNMMPS 294
+ +V M P+ TY +LI K + +A + EM M P+
Sbjct: 243 ANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPN 302
Query: 295 PHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPE 329
++ + + + + A E ++ K GF P+
Sbjct: 303 AATYTAVFEAFVREGKEESARELLQEMKGKGFVPD 337
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 63/131 (48%), Gaps = 4/131 (3%)
Query: 244 VNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLIN 303
+ E+ +M+ E F + V + +A K + EA+ + ++++KN MP + ++
Sbjct: 184 LQEIFHKMRTEGFTNEAVK---MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVE 240
Query: 304 GLGSDKRLDEALEFYEKFKANGFAPETPTYNAVV-GAYCWSMRMDDAYRVVDEMKQCGVG 362
+ + E L+ + + A+G +P TY+ ++ G DA + + EM G+
Sbjct: 241 AYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMS 300
Query: 363 PNSRTYDIILQ 373
PN+ TY + +
Sbjct: 301 PNAATYTAVFE 311
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 108/218 (49%), Gaps = 20/218 (9%)
Query: 123 SFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKME 182
S++ +I+ + + L ++M +R +++ ++ ++ EA+ FE+M
Sbjct: 142 SWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRG---RIDEAMNLFERMP 198
Query: 183 KYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLL 242
+ +V + +VD L K+ V++A+ LFD M R ++ S+ ++ G++Q +
Sbjct: 199 R----RDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNII----SWNAMITGYAQNNRID 250
Query: 243 RVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLI 302
+++ + M E D ++ +I + + ++ ++A G + M EKN++ ++T+I
Sbjct: 251 EADQLFQVMP----ERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVIS----WTTMI 302
Query: 303 NGLGSDKRLDEALEFYEKFKANG-FAPETPTYNAVVGA 339
G +K +EAL + K +G P TY +++ A
Sbjct: 303 TGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSA 340
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 87/170 (51%), Gaps = 15/170 (8%)
Query: 187 KPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNE 246
+P V L+ LCK + +A++LFD + R D+ ++T ++ G+ + ++ E
Sbjct: 43 RPRVPQPEWLIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITGYIKLGDMREARE 98
Query: 247 VCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLG 306
+ + +VVT+ +++ Y ++K+ A + EM E+N++ ++T+I+G
Sbjct: 99 LFDRVDS---RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVS----WNTMIDGYA 151
Query: 307 SDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM 356
R+D+ALE +++ ++N++V A R+D+A + + M
Sbjct: 152 QSGRIDKALELFDEMPERNIV----SWNSMVKALVQRGRIDEAMNLFERM 197
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 98/187 (52%), Gaps = 19/187 (10%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+ EA + F+ + + +V + ++ K + +A+ELFD++ R ++ ++T
Sbjct: 61 KIAEARKLFDGLPE----RDVVTWTHVITGYIKLGDMREARELFDRVDSR---KNVVTWT 113
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ G+ + + L + +EM E +VV++ +I+ Y ++ + D+A+ + EM E+
Sbjct: 114 AMVSGYLRSKQLSIAEMLFQEMP----ERNVVSWNTMIDGYAQSGRIDKALELFDEMPER 169
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
N++ +++++ L R+DEA+ +E+ + ++ A+V + ++D+A
Sbjct: 170 NIVS----WNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEA 221
Query: 350 YRVVDEM 356
R+ D M
Sbjct: 222 RRLFDCM 228
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 100/233 (42%), Gaps = 6/233 (2%)
Query: 108 FHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQ-RKLLTRDTXXXXXXXXX 166
H +K F+ T ALI+ K R +K + + ++K R L++ ++
Sbjct: 253 LHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMING 312
Query: 167 XXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLK 226
+ AVE FEK++ GLKP+ + +N L+ + V +A + F++M +VP LK
Sbjct: 313 QH---ETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLK 369
Query: 227 SYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEM 286
T LL S L E+ + E D+ LI+ Y K A +
Sbjct: 370 CLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRF 429
Query: 287 QEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
+ K P ++ +I+G G + A+E +E + P T+ AV+ A
Sbjct: 430 EPKP--KDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSA 480
>AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:14320668-14322398 FORWARD
LENGTH=284
Length = 284
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 119 HSTESFHALIEALGKIRQFKVIWNLVEDMKQRKL-LTRDTXXXXXXXXXXXXKVKEAVET 177
+S ++AL+ + + +V W +V +MK+RK L K+A+
Sbjct: 51 YSVRLYNALVS---RYLRKEVSWRVVNEMKKRKFRLNSFVYGKIIRIYRDNGMWKKALGI 107
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSK---------SVEKAQELFDKMRHRGLVPDLKSY 228
E++ + GL +V +N ++D K S E EL K++ +G+ P +
Sbjct: 108 VEEIREIGLPMDVEIYNSVIDTFGKYGELDEELQFGSFEDIGELVGKLKSQGVAPSANLF 167
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
L ++QQ + +V + M+ E EP+++ +LINA+ A K+ EA+ YH ++E
Sbjct: 168 CTLANAYAQQGLCKQTVKVLKMMENEGIEPNLIMLNVLINAFGTAGKHMEALSIYHHIKE 227
Query: 289 KNMM-PSPHIFSTLINGLGSDKRLD 312
+ P +STL+ K+ +
Sbjct: 228 TVWIHPDVVTYSTLMKAFTRAKKYE 252
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 84/201 (41%), Gaps = 14/201 (6%)
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPD--LKSYTILLEGWSQQQNLL 242
G +P+ + ++ L + +A LF ++ + ++ Y L+ + +++
Sbjct: 11 GSRPDPLSYVSFIETLASLRRTLEADALFHEVVRFMIYGSYSVRLYNALVSRYLRKEVSW 70
Query: 243 RVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLI 302
RV EMK F + YG +I Y + +A+G E++E + I++++I
Sbjct: 71 RV---VNEMKKRKFRLNSFVYGKIIRIYRDNGMWKKALGIVEEIREIGLPMDVEIYNSVI 127
Query: 303 NGLGSDKRLDEALEF---------YEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ G LDE L+F K K+ G AP + + AY +V+
Sbjct: 128 DTFGKYGELDEELQFGSFEDIGELVGKLKSQGVAPSANLFCTLANAYAQQGLCKQTVKVL 187
Query: 354 DEMKQCGVGPNSRTYDIILQP 374
M+ G+ PN ++++
Sbjct: 188 KMMENEGIEPNLIMLNVLINA 208
>AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=550
Length = 550
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 98/235 (41%), Gaps = 20/235 (8%)
Query: 72 STIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEAL 131
S ++ L +PE +A+ + L L F+WA +Q F H S+H I L
Sbjct: 92 SKFQETISKLPPRFTPEELADAIT-LEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKL 150
Query: 132 GK------IRQFKVIWNLVED--------MKQRKLLTRDTXXXXXXXXXXXXKVKEAVET 177
G IR + ++V M+ +L + ++
Sbjct: 151 GAAKSGKLIRAVNIFRHMVNSRNLECRPTMRTYHILFKALLGRGNNSFINHLYMETVRSL 210
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
F +M G++P+V N LV K +++ +EL +M+ +G VP+ KSY L+ ++
Sbjct: 211 FRQMVDSGIEPDVFALNCLV----KGRTI-NTRELLSEMKGKGFVPNGKSYNSLVNAFAL 265
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ + EM D ++Y L++ C+ KYDEA ++EK ++
Sbjct: 266 SGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLV 320
>AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=575
Length = 575
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 98/235 (41%), Gaps = 20/235 (8%)
Query: 72 STIDAALADLSVEVSPELVAEVLNKLSNAGVLALSFFHWAEKQKGFKHSTESFHALIEAL 131
S ++ L +PE +A+ + L L F+WA +Q F H S+H I L
Sbjct: 117 SKFQETISKLPPRFTPEELADAIT-LEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKL 175
Query: 132 GK------IRQFKVIWNLVED--------MKQRKLLTRDTXXXXXXXXXXXXKVKEAVET 177
G IR + ++V M+ +L + ++
Sbjct: 176 GAAKSGKLIRAVNIFRHMVNSRNLECRPTMRTYHILFKALLGRGNNSFINHLYMETVRSL 235
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
F +M G++P+V N LV K +++ +EL +M+ +G VP+ KSY L+ ++
Sbjct: 236 FRQMVDSGIEPDVFALNCLV----KGRTI-NTRELLSEMKGKGFVPNGKSYNSLVNAFAL 290
Query: 238 QQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ + EM D ++Y L++ C+ KYDEA ++EK ++
Sbjct: 291 SGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLV 345
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 2/188 (1%)
Query: 186 LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVN 245
L+P+V +N +++ + K E A + +++ RG P +Y +++E + V+
Sbjct: 589 LEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVH 648
Query: 246 EVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGL 305
E R+M+ P+ + Y +L+N K K DEAV +M+ + ++ S ++ L L
Sbjct: 649 EFFRKMQKSSI-PNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCL 707
Query: 306 GSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNS 365
S R +E L +K P TY ++ A S + +A + D+MK+ PN
Sbjct: 708 CSAGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKV-CSPNL 766
Query: 366 RTYDIILQ 373
T +I+L+
Sbjct: 767 VTCNIMLK 774
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 95/226 (42%), Gaps = 13/226 (5%)
Query: 113 KQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVK 172
KQ+G K S ++ ++E + ++ ++ M++ + K
Sbjct: 620 KQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSSIPNALAYRVLVNTLWKEGKSD 679
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
EAV T E ME G+ + + L LC + + + K+ P + +YT L+
Sbjct: 680 EAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKKICRVANKPLVVTYTGLI 739
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE---- 288
+ N+ + +MK C P++VT I++ AY + ++EA + +M E
Sbjct: 740 QACVDSGNIKNAAYIFDQMKKVC-SPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDGNH 798
Query: 289 -KN-------MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGF 326
KN ++P + F+T+++ ++ D+ Y + +G+
Sbjct: 799 IKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDDFGYAYREMLRHGY 844
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 83/186 (44%)
Query: 188 PEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEV 247
P S ++D + +E A LF + +G P + +IL+ + + +
Sbjct: 702 PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHI 761
Query: 248 CREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGS 307
R + E D V Y LI A +A K A Y M + S ++T+I+ G
Sbjct: 762 SRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGR 821
Query: 308 DKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
+LD+A+E + + +G + Y ++ Y +M +A + EM++ G+ P + +
Sbjct: 822 GLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPS 881
Query: 368 YDIILQ 373
Y+++++
Sbjct: 882 YNMMVK 887
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 85/199 (42%), Gaps = 1/199 (0%)
Query: 193 FNKLVDVLCKSKSVEKAQELFDKMR-HRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREM 251
F + VL + + + ++ F M+ P + YTI+L + Q + E EM
Sbjct: 155 FRDMCVVLKEQRGWRQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEM 214
Query: 252 KCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRL 311
EPD V G ++ Y + ++ + FY +QE+ ++ S +++ +++ L
Sbjct: 215 LEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFH 274
Query: 312 DEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDII 371
+ ++ + + G P TY VV +Y ++A + EMK G P TY +
Sbjct: 275 GKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSV 334
Query: 372 LQPDKGSKNPRSLLGFPEN 390
+ + + +G E+
Sbjct: 335 ISLSVKAGDWEKAIGLYED 353
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/169 (19%), Positives = 78/169 (46%)
Query: 193 FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK 252
+N L+ + ++ ++ A E++++M G+ +++Y ++ + + L + E+ +
Sbjct: 777 YNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNAR 836
Query: 253 CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD 312
D Y +I Y K K EA+ + EMQ+K + P ++ ++ + +
Sbjct: 837 RSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHH 896
Query: 313 EALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
E E + + NG + TY ++ Y S + +A + + +K+ G+
Sbjct: 897 EVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGI 945
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/255 (19%), Positives = 99/255 (38%), Gaps = 5/255 (1%)
Query: 116 GFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAV 175
G + E+ LI G+ + K L + K + +++A
Sbjct: 665 GLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESKTPGKSVIRSMIDAYVRCGWLEDAY 724
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
F + + G P + LV+ L +A+ + + + D Y L++
Sbjct: 725 GLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAM 784
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSP 295
+ L +E+ M + TY +I+ Y + + D+A+ + + +
Sbjct: 785 LEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDE 844
Query: 296 HIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDE 355
I++ +I G ++ EAL + + + G P TP+YN +V C + R+ + VDE
Sbjct: 845 KIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMV-KICATSRL---HHEVDE 900
Query: 356 MKQCGVGPNSRTYDI 370
+ Q + N R D+
Sbjct: 901 LLQ-AMERNGRCTDL 914
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 88/204 (43%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K++ A E +E+M G+ + +N ++ V + ++KA E+F R GL D K YT
Sbjct: 789 KLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYT 848
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ + + + + EM+ + +P +Y +++ ++ + E M+
Sbjct: 849 NMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERN 908
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ TLI + EA + K G +++++ A + M++A
Sbjct: 909 GRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEA 968
Query: 350 YRVVDEMKQCGVGPNSRTYDIILQ 373
R +M + G+ P+S IL+
Sbjct: 969 ERTYCKMSEAGISPDSACKRTILK 992
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/275 (19%), Positives = 119/275 (43%), Gaps = 1/275 (0%)
Query: 107 FFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXX 166
FF W + Q ++ S + ++ G++ + K+ +M +
Sbjct: 174 FFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTY 233
Query: 167 XXXKVKEAVETFEK-MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDL 225
A+ TF K +++ + S +N ++ L K K +L+ +M G+ P+
Sbjct: 234 ARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNE 293
Query: 226 KSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHE 285
+YT+++ +++Q + EMK F P+ VTY +I+ KA +++A+G Y +
Sbjct: 294 FTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYED 353
Query: 286 MQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMR 345
M+ + ++PS + +T+++ + +AL + + N + ++ Y
Sbjct: 354 MRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGL 413
Query: 346 MDDAYRVVDEMKQCGVGPNSRTYDIILQPDKGSKN 380
DA + +E ++ + + +TY + Q S N
Sbjct: 414 FHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGN 448
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 86/200 (43%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
+EA++ F +M+ G PE ++ ++ + K+ EKA L++ MR +G+VP + +
Sbjct: 310 EEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATM 369
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
L + + +N + + +M+ D V G++I Y K + +A + E + N+
Sbjct: 370 LSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNL 429
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
+ + + + + +AL+ E K Y ++ Y +D A
Sbjct: 430 LADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEE 489
Query: 352 VVDEMKQCGVGPNSRTYDII 371
+ + G+ S D++
Sbjct: 490 AFRALSKTGLPDASSCNDML 509
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 10/211 (4%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
+K+A +MEK G+KP+ +N L EKA ++ KM+ +G+ P++ S+T
Sbjct: 307 LKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTA 366
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAY-CKAKKYD--EAVGFYHEMQ 287
+ G S+ N +V +M+ E P+ T L+ C + + E GF
Sbjct: 367 IFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGF---CL 423
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
KN++ ++ + L++ G L A+E + K A ++N ++ Y R +
Sbjct: 424 RKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLA----SWNCMLMGYAMFGRGE 479
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILQPDKGS 378
+ M + G+ P++ T+ +L K S
Sbjct: 480 EGIAAFSVMLEAGMEPDAITFTSVLSVCKNS 510
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 4/215 (1%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V +A+ ++ME GLKP++ +N L+ + A + +M+ GL P S +
Sbjct: 171 VDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISS 230
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
LL+ ++ +L + + DV LI+ Y K A + M KN
Sbjct: 231 LLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKN 290
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
++ +++L++GL L +A + + G P+ T+N++ Y + + A
Sbjct: 291 IVA----WNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKAL 346
Query: 351 RVVDEMKQCGVGPNSRTYDIILQPDKGSKNPRSLL 385
V+ +MK+ GV PN ++ I + N R+ L
Sbjct: 347 DVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNAL 381
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 93/202 (46%), Gaps = 4/202 (1%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
K+A+ ++M+ GLKP S + L+ + + ++ + + + L D+ T L
Sbjct: 207 KDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTL 266
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++ + + L V M + ++V + L++ A +A M+++ +
Sbjct: 267 IDMYIKTGYLPYARMVFDMMDAK----NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGI 322
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
P +++L +G + + ++AL+ K K G AP ++ A+ + +A +
Sbjct: 323 KPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALK 382
Query: 352 VVDEMKQCGVGPNSRTYDIILQ 373
V +M++ GVGPN+ T +L+
Sbjct: 383 VFIKMQEEGVGPNAATMSTLLK 404
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 85/182 (46%), Gaps = 4/182 (2%)
Query: 193 FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK 252
+N++V V +S + EKA ELF +M+ G + LL+ S ++ ++ +
Sbjct: 57 WNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVL 116
Query: 253 CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD 312
E +V LI Y + K + + ++ M+++N+ I S+ LG +D
Sbjct: 117 RLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTK-LG---YVD 172
Query: 313 EALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+A+ ++ + G P+ T+N+++ Y DA V+ M+ G+ P++ + +L
Sbjct: 173 DAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLL 232
Query: 373 QP 374
Q
Sbjct: 233 QA 234
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 80/168 (47%), Gaps = 4/168 (2%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
++AVE F +M+ G K S KL+ V + + +++ + GL ++ L
Sbjct: 71 EKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSL 130
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+ +S+ L +V MK + ++ ++ ++++Y K D+A+G EM+ +
Sbjct: 131 IVMYSRNGKLELSRKVFNSMK----DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGL 186
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
P +++L++G S +A+ ++ + G P T + ++++ A
Sbjct: 187 KPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQA 234
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 89/196 (45%), Gaps = 5/196 (2%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+A++ F KM G+ P V K + + E+ G + D+ L+
Sbjct: 335 QALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLV 394
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ +S+ L +V +K DV T+ +I YC+A +A + MQ+ N+
Sbjct: 395 DMYSKCGKLEDARKVFDSVK----NKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLR 450
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKANG-FAPETPTYNAVVGAYCWSMRMDDAYR 351
P+ ++T+I+G + EA++ +++ + +G T T+N ++ Y + + D+A
Sbjct: 451 PNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALE 510
Query: 352 VVDEMKQCGVGPNSRT 367
+ +M+ PNS T
Sbjct: 511 LFRKMQFSRFMPNSVT 526
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 97/225 (43%), Gaps = 7/225 (3%)
Query: 143 LVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCK 202
+ + M++R L T + +E + F M K G+ P+ F K++
Sbjct: 137 VFDSMRERNLFTWSAMIGAYSREN---RWREVAKLFRLMMKDGVLPDDFLFPKILQGCAN 193
Query: 203 SKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVT 262
VE + + + G+ L+ +L +++ L + R M+ E DV+
Sbjct: 194 CGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMR----ERDVIA 249
Query: 263 YGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFK 322
+ ++ AYC+ K++EAV EM+++ + P ++ LI G + D A++ +K +
Sbjct: 250 WNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKME 309
Query: 323 ANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRT 367
G + T+ A++ + A + +M GV PN+ T
Sbjct: 310 TFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVT 354
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 93/203 (45%), Gaps = 4/203 (1%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K +EAVE ++MEK G+ P + +N L+ + + A +L KM G+ D+ ++T
Sbjct: 262 KHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWT 321
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
++ G + ++ R+M P+ VT ++A K ++ + +
Sbjct: 322 AMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKM 381
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ + ++L++ +L++A + ++ K + T+N+++ YC + A
Sbjct: 382 GFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK----NKDVYTWNSMITGYCQAGYCGKA 437
Query: 350 YRVVDEMKQCGVGPNSRTYDIIL 372
Y + M+ + PN T++ ++
Sbjct: 438 YELFTRMQDANLRPNIITWNTMI 460
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 85/185 (45%), Gaps = 4/185 (2%)
Query: 174 AVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLE 233
A + F +M + +V +N ++ C++ E+A EL +M G+ P L ++ IL+
Sbjct: 235 ATKFFRRMRE----RDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIG 290
Query: 234 GWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
G++Q ++ ++M+ DV T+ +I+ +A+ + +M ++P
Sbjct: 291 GYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVP 350
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ + ++ K +++ E + GF + N++V Y +++DA +V
Sbjct: 351 NAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVF 410
Query: 354 DEMKQ 358
D +K
Sbjct: 411 DSVKN 415
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 100/235 (42%), Gaps = 36/235 (15%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
K+++A + F+ ++ +V +N ++ C++ KA ELF +M+ L P++ ++
Sbjct: 402 KLEDARKVFDSVKN----KDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWN 457
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCEC-FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
++ G+ + + ++ + M+ + + + T+ ++I Y + K DEA+ + +MQ
Sbjct: 458 TMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQF 517
Query: 289 KNMMP-SPHIFSTL--------------INGLGSDKRLDEA----------------LEF 317
MP S I S L I+G + LD +E+
Sbjct: 518 SRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEY 577
Query: 318 YEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+ T+N+++G Y A + ++MK G+ PN T I+
Sbjct: 578 SRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSII 632
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 183 KYGL--KPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
++GL +P+V KL+ + K + A+++FD MR R L +++ ++ +S++
Sbjct: 106 RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLF----TWSAMIGAYSRENR 161
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
V ++ R M + PD + ++ + + + + M + ++
Sbjct: 162 WREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNS 221
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
++ LD A +F+ + + + +N+V+ AYC + + ++A +V EM++ G
Sbjct: 222 ILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEG 277
Query: 361 VGPNSRTYDIIL 372
+ P T++I++
Sbjct: 278 ISPGLVTWNILI 289
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 17/195 (8%)
Query: 193 FNKLVDVLCKSKSVEKAQELFDKM-RHRGLVPDLKSYTILLEGWSQQ---QNLLRVNEVC 248
+ KL+ VL ++ ++A ++F++M R L PD+ +Y + Q + LL+V E
Sbjct: 258 YTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIERM 317
Query: 249 REMKCE------------CFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPH 296
R+ + EPD+V Y ++NA ++ + E+++ + P+
Sbjct: 318 RQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGA 377
Query: 297 IFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEM 356
+ + + + D +F+ K K++G AP+ TY +V A ++++A V +M
Sbjct: 378 TYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDM 437
Query: 357 KQCGV-GPNSRTYDI 370
+Q GV G S Y++
Sbjct: 438 EQKGVIGTGSVYYEL 452
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 90/190 (47%), Gaps = 4/190 (2%)
Query: 186 LKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVN 245
L+P++ +N +++ + + +F ++R GL P+ +Y + +E + RV+
Sbjct: 337 LEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVH 396
Query: 246 EVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGL 305
+ R+MK P +TY +L+ A + K +EAV +M++K ++ + ++ L L
Sbjct: 397 DFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCL 456
Query: 306 GSDKRL-DEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK-QCGVGP 363
++ R D LE + P T+ ++ A +DD + MK +C P
Sbjct: 457 CNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQYMKDKC--DP 514
Query: 364 NSRTYDIILQ 373
N T +++L+
Sbjct: 515 NIGTANMMLK 524
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 8/189 (4%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
++K A + FE+ K + +N L++ C++K + A LF M R + S++
Sbjct: 176 QLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPER----NSGSWS 231
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
L++G+ L R ++ M E +VV++ LIN + + Y+ A+ Y EM EK
Sbjct: 232 TLIKGYVDSGELNRAKQLFELMP----EKNVVSWTTLINGFSQTGDYETAISTYFEMLEK 287
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
+ P+ + + +++ L + + NG + A+V Y +D A
Sbjct: 288 GLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCA 347
Query: 350 YRVVDEMKQ 358
V M
Sbjct: 348 ATVFSNMNH 356
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
G+K + + LVD+ K ++ A +F M H+ D+ S+T +++GW+ +
Sbjct: 323 GIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK----DILSWTAMIQGWAVHGRFHQA 378
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ-EKNMMPSPHIFSTLIN 303
+ R+M +PD V + ++ A + + D + F+ M+ + + P+ + +++
Sbjct: 379 IQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVD 438
Query: 304 GLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
LG +L+EA E E N P+ T+ A+ A + YR + + Q
Sbjct: 439 LLGRAGKLNEAHELVENMPIN---PDLTTWAALYRA----CKAHKGYRRAESVSQ 486
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 86/185 (46%), Gaps = 1/185 (0%)
Query: 181 MEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQN 240
MEK + ++ + L+D VE+A+ L M + L + Y +++ G+S+
Sbjct: 272 MEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGL 331
Query: 241 LLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFST 300
+ +V E+ EM P+ TY +L+N CKA K EA+ F +E++ ++ST
Sbjct: 332 VEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYST 391
Query: 301 LINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCG 360
L +D++LE + +GF P + + + + +A ++ + +CG
Sbjct: 392 LSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSL-FEVNRKEAQMLITIVVKCG 450
Query: 361 VGPNS 365
+ P S
Sbjct: 451 IKPKS 455
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 81/182 (44%), Gaps = 2/182 (1%)
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
G+K + F ++ K E+ + M ++ DL SY +L++G++ +
Sbjct: 241 GVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEA 300
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLING 304
+ M + + Y +++N Y + ++ + Y EM + + P+ + L+NG
Sbjct: 301 ERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNG 360
Query: 305 LGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRM-DDAYRVVDEMKQCGVGP 363
L ++ EA+ F + + N F + Y+ + C+ + M D + VV EM + G P
Sbjct: 361 LCKAGKVCEAMSFLNELRVNEFEIDEEMYST-LSEECYRVGMIDKSLEVVAEMIRDGFIP 419
Query: 364 NS 365
+
Sbjct: 420 GA 421
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 88/206 (42%), Gaps = 2/206 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGL-VPDLKSY 228
K E VE FE M+ +K + + L + +E A++ F M G+ V + S
Sbjct: 154 KFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMVESGIDVVTVYSL 213
Query: 229 TILLEGWSQQQNLLRVNEVCREMK-CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
T+++ + R E+ EM + + ++VT+ +I K ++E M+
Sbjct: 214 TVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLME 273
Query: 288 EKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMD 347
++++M + LI+G S +++EA E+ YN ++ Y ++
Sbjct: 274 KESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVE 333
Query: 348 DAYRVVDEMKQCGVGPNSRTYDIILQ 373
+ EM GV PN TY +++
Sbjct: 334 KVIELYSEMSSRGVTPNKDTYWVLMN 359
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 80/177 (45%)
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
G K + + ++D+ ++ ++ +F M+ +G++ D +YT L+ S ++
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGA 176
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLING 304
+ EM+ EP VV+Y + + +EA Y EM + P+ H ++ L+
Sbjct: 177 MRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEY 236
Query: 305 LGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
L + + +EAL+ + K + G P+ N ++ RV+ MK+ GV
Sbjct: 237 LVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGV 293
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 61/118 (51%)
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
F+ D TY +++ + +A + +H M+EK ++ +++LI+ + S +D A+
Sbjct: 118 FKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAM 177
Query: 316 EFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+E+ + NG P +Y A + R+++A V EM + V PN TY ++++
Sbjct: 178 RLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLME 235
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 4/174 (2%)
Query: 107 FFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQRKLLTRD-TXXXXXXXX 165
FF+WA + KGFKH ++ +++ G+ + + ++++ MK++ +L T
Sbjct: 108 FFNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWV 167
Query: 166 XXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDL 225
V A+ +E+M G +P V + + +L VE+A E++ +M + P+
Sbjct: 168 SSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNC 227
Query: 226 KSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEA 279
+YT+L+E ++ +M+ +PD ILI KA K+ E
Sbjct: 228 HTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILI---AKALKFGET 278
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 75/154 (48%)
Query: 219 RGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDE 278
+G D +YT +L+ + + + + V MK + D VTY LI+ + D
Sbjct: 116 KGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDG 175
Query: 279 AVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVG 338
A+ + EM++ P+ ++ + L +D R++EA E Y++ + +P TY ++
Sbjct: 176 AMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLME 235
Query: 339 AYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+ + ++A + +M++ GV P+ +I++
Sbjct: 236 YLVATGKCEEALDIFFKMQEIGVQPDKAACNILI 269
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 94/207 (45%), Gaps = 6/207 (2%)
Query: 178 FEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQ 237
+E + K +KP + N L++V S + +++ M+ + D+ SY ILL+
Sbjct: 290 YEDLLKENIKPNIYVINSLMNV--NSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCL 347
Query: 238 QQNLLRVNEVCREMK----CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMP 293
+ ++ +E K + D TY +I + AK + A+ +M+ + P
Sbjct: 348 AGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTP 407
Query: 294 SPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVV 353
+ H +S+LI+ + +++A +E+ A+G P + +N ++ A + + D A+R+
Sbjct: 408 NTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLF 467
Query: 354 DEMKQCGVGPNSRTYDIILQPDKGSKN 380
K V + DI+ + S N
Sbjct: 468 QSWKGSSVNESLYADDIVSKGRTSSPN 494
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 92/215 (42%), Gaps = 14/215 (6%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
V++A FE+M G +P FN L+ ++ ++A LF + + L + I
Sbjct: 425 VEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDI 484
Query: 231 LLEGWSQQQNLLRVNE------------VCREMKCECFEPDVVTYGILINAYCKAKKYDE 278
+ +G + N+L+ N + K CF+P TY IL+ A C Y
Sbjct: 485 VSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKA-CGTDYY-R 542
Query: 279 AVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVG 338
EM+ + P+ +STLI+ G ++ A+ + G P+ Y +
Sbjct: 543 GKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIK 602
Query: 339 AYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQ 373
+ + A+ + +EM++ + PN TY+ +L+
Sbjct: 603 ICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLK 637
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 176 ETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGW 235
E ++M+ GL P ++ L+D+ S VE A + M G PD+ +YT ++
Sbjct: 545 ELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKIC 604
Query: 236 SQQQNLLRVNEVCREMKCECFEPDVVTYGILINA---YCKAKKYDEAVGFYHEMQEKNMM 292
++ + L + EM+ +P+ VTY L+ A Y + + + Y +M+
Sbjct: 605 AENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYK 664
Query: 293 PSPHIFSTLI----------NGLGSDKRLDE 313
P+ H LI NG DK D+
Sbjct: 665 PNDHFLKELIEEWCEGVIQENGQSQDKISDQ 695
>AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11605156-11610651 FORWARD
LENGTH=843
Length = 843
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 107/246 (43%), Gaps = 5/246 (2%)
Query: 124 FHALIEALGKIRQFKVIWNLVEDMKQRKLLTRDTXXXXXXXXXXXXKVKEAVETFEKM-E 182
F L ++L + K++W L D ++ + T V++A+ F K+ E
Sbjct: 327 FGYLGKSLLESVAMKLLWEL-RDCRKDGVETVSNLIFSYATCIPNSTVEDAIFKFNKLHE 385
Query: 183 KYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLL 242
+ + P + + LV LC S V A ++ + M GLV LL+ Q
Sbjct: 386 ELDIVPSSTSYENLVSYLCGSNEVVTALDIVENMCEAGLVISANILHSLLQAIEQILEFN 445
Query: 243 RVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLI 302
V + M + +P+ T+ IN + K ++ A ++ N+ P+ ++++++
Sbjct: 446 LVQRIYSIMSNKSVKPNSETFRKSINLCIRIKDFEGAYNMLGNLKNFNLAPNSSMYNSIM 505
Query: 303 NGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVG 362
G +K+++ AL+ ++ K P++ T++ ++ YC Y EMKQ GV
Sbjct: 506 AGYFREKKVNSALKVLKEMKEADVKPDSVTFSYLIN-YCGEEATIAKY--YKEMKQAGVE 562
Query: 363 PNSRTY 368
N Y
Sbjct: 563 VNKHVY 568
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 81/158 (51%), Gaps = 3/158 (1%)
Query: 234 GWSQQQNLLRVNEVCREMK-CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+++ + + +V + +EMK EC +PDV+TY +++ +A +E +G M+E +
Sbjct: 186 AFAETRQIDKVLMILKEMKEWEC-KPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSV 244
Query: 293 PSPHI-FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYR 351
I ++T++NG+ R D L Y + G P+ +Y AV+ + S + ++ R
Sbjct: 245 SVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLR 304
Query: 352 VVDEMKQCGVGPNSRTYDIILQPDKGSKNPRSLLGFPE 389
+ DEMKQ + P+ Y ++ K S + +S L +
Sbjct: 305 LFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSD 342
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 79/167 (47%), Gaps = 1/167 (0%)
Query: 193 FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK 252
N+++ +++ ++K + +M+ PD+ +Y +L+ + + + V MK
Sbjct: 180 MNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMK 239
Query: 253 CEC-FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRL 311
+C +++TY ++N KA ++D + Y+EM + + P ++ +I+ LG +
Sbjct: 240 EDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNV 299
Query: 312 DEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQ 358
E+L +++ K P Y A++ S A ++ DE+K
Sbjct: 300 KESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDELKN 346
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 78/154 (50%), Gaps = 1/154 (0%)
Query: 170 KVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVP-DLKSY 228
++ + + ++M+++ KP+V +N ++D+L ++ V + + M+ V ++ +Y
Sbjct: 192 QIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITY 251
Query: 229 TILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQE 288
+L G + + EM EPD+++Y +I++ ++ E++ + EM++
Sbjct: 252 NTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQ 311
Query: 289 KNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFK 322
+ + PS +++ LI+ L AL+ ++ K
Sbjct: 312 RQIRPSVYVYRALIDCLKKSGDFQSALQLSDELK 345
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 108/280 (38%), Gaps = 72/280 (25%)
Query: 128 IEALGKIRQFKVIWNLVEDMKQR-KLLTRDTXXXXXXXXXXXXKVKEAVETFEKMEKYGL 186
++ L K ++F I L+E K K+ T A++ FE+M+K G
Sbjct: 74 VQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGT 133
Query: 187 KPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNE 246
V FN L+ S E+ +LFD+ R N
Sbjct: 134 PRTVVSFNALLAACLHSDLFERVPQLFDEFPQR------------------------YNN 169
Query: 247 VCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLG 306
+ PD ++YG+LI +YC + K ++A+ +M+ K + + F+T++ L
Sbjct: 170 IT---------PDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLY 220
Query: 307 SDKRLDEA----------------------------------LEFYEKFKANGFAPETPT 332
+ +DEA E E+ + G P+T +
Sbjct: 221 KNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAKESPERVKELMEEMSSVGLKPDTVS 280
Query: 333 YNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
YN ++ AYC M +A +V + ++Q PN+ T+ ++
Sbjct: 281 YNYLMTAYCVKGMMSEAKKVYEGLEQ----PNAATFRTLI 316
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 115/258 (44%), Gaps = 9/258 (3%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQFKVIWNLVEDMKQR-KLLTRD--TXXX 160
A+ F +K G + SF+AL+ A F+ + L ++ QR +T D +
Sbjct: 121 AMKMFEEMDKL-GTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGM 179
Query: 161 XXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRG 220
K ++A+E ME G++ + F ++ L K+ V++A+ L+ +M ++G
Sbjct: 180 LIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKG 239
Query: 221 LVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAV 280
D Y + L + +++ RV E+ EM +PD V+Y L+ AYC EA
Sbjct: 240 CDLDNTVYNVRLMN-AAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAK 298
Query: 281 GFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
Y +++ P+ F TLI L + D+ L ++K P+ T +
Sbjct: 299 KVYEGLEQ----PNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGL 354
Query: 341 CWSMRMDDAYRVVDEMKQ 358
+ RM+DA V +K+
Sbjct: 355 VKNNRMEDARGVARIVKK 372
>AT3G42630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:14722314-14723635 FORWARD
LENGTH=415
Length = 415
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 82/178 (46%)
Query: 184 YGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLR 243
+ K ++ D+ LV L + + + A E+F + + L+P+ ++ L+ +++ +LR
Sbjct: 41 FSQKIQIVDYAPLVQTLSQRRLPDVAHEIFLQTKSVNLLPNYRTLCALMLCFAENGFVLR 100
Query: 244 VNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLIN 303
+ E+ CF PDV LI+AY + +DE ++ ++ P + S I+
Sbjct: 101 ARTIWDEIINSCFVPDVFVVSKLISAYEQFGCFDEVAKITKDVAARHSKLLPVVSSLAIS 160
Query: 304 GLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGV 361
G + +L+ E+ + G E T N +V Y + +D + +K+ G+
Sbjct: 161 CFGKNGQLELMEGVIEEMDSKGVLLEAETANVIVRYYSFFGSLDKMEKAYGRVKKFGI 218
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 101/203 (49%), Gaps = 13/203 (6%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
++A+ F++M + + +N ++ ++ + A ELF +M+ G + + + T +
Sbjct: 211 EDALSVFDEM----VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSV 266
Query: 232 LEGWSQQQNL-LRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
L + L L + +K ++ D++ L++ YCK ++A+ +++M+E++
Sbjct: 267 LRACTGLALLELGMQAHVHIVK---YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERD 323
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
++ +ST+I+GL + EAL+ +E+ K++G P T V+ A + ++D +
Sbjct: 324 VIT----WSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGW 379
Query: 351 RVVDEMKQC-GVGPNSRTYDIIL 372
MK+ G+ P Y ++
Sbjct: 380 YYFRSMKKLYGIDPVREHYGCMI 402
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 69/148 (46%), Gaps = 8/148 (5%)
Query: 190 VSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCR 249
+S+F +L C + + +A + D ++ GL D +Y+ L++ + + N +CR
Sbjct: 30 LSEFTRL----CYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICR 85
Query: 250 EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDK 309
+ P + +LIN Y K ++A + +M ++N++ ++T+I+ K
Sbjct: 86 HLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVIS----WTTMISAYSKCK 141
Query: 310 RLDEALEFYEKFKANGFAPETPTYNAVV 337
+ALE + P TY++V+
Sbjct: 142 IHQKALELLVLMLRDNVRPNVYTYSSVL 169
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 111/270 (41%), Gaps = 8/270 (2%)
Query: 104 ALSFFHWAEKQKGFKHSTESFHALIEALGKIRQ----FKVIWNLVEDMKQRKLLTRDTXX 159
A+ F W ++KG T + LI+ L ++ + +++ + VE + + D+
Sbjct: 202 AVMLFDWM-RRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIG 260
Query: 160 XXXXXXXXXXKVKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHR 219
KV+EA K+ G S ++K+ + + E ++++
Sbjct: 261 KVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEVKYE 320
Query: 220 GLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEA 279
PD+ +L ++ R E++ F+ D VT+GILI C A
Sbjct: 321 ---PDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRA 377
Query: 280 VGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
V + E+ K P + ++ +++GL ++ K NG T+ +V
Sbjct: 378 VLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTG 437
Query: 340 YCWSMRMDDAYRVVDEMKQCGVGPNSRTYD 369
YC + + ++A R+V++M G+ S+ D
Sbjct: 438 YCKARQFEEAKRIVNKMFGYGLIEASKVED 467
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 87/183 (47%), Gaps = 3/183 (1%)
Query: 190 VSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCR 249
+ K++++LC + V++A+ L K+ G + + Y+ + G++++Q+ +
Sbjct: 256 IDSIGKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIG 315
Query: 250 EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDK 309
E+K +EPDV ++++ C+ + A + E++ F LI +
Sbjct: 316 EVK---YEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEG 372
Query: 310 RLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYD 369
+ A+ + + + G+ P+ +YNA++ + ++DEMK+ G+ + T+
Sbjct: 373 DIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFK 432
Query: 370 IIL 372
I++
Sbjct: 433 IMV 435
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 15/203 (7%)
Query: 185 GLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRV 244
G+KP + LC + V+KA +L+ M +G +L S + + + L+
Sbjct: 974 GMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGW--NLGSSVVQTK---IVETLISK 1028
Query: 245 NEVCREMKCECFEPDVVTYGILINAYCKAKK-------YDEAVGFYHEMQEKNMMPSPHI 297
E+ K E F V G++ Y K D AV + M + +P
Sbjct: 1029 GEI---PKAEDFLTRVTRNGMMAPNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSS 1085
Query: 298 FSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
+ ++INGL +LD+A++F+ + G +P T++ +V +C + ++ ++ R++ M
Sbjct: 1086 YDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMV 1145
Query: 358 QCGVGPNSRTYDIILQPDKGSKN 380
G P+ + ++ + KN
Sbjct: 1146 GLGESPSQEMFKTVIDRFRVEKN 1168
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 88/207 (42%), Gaps = 9/207 (4%)
Query: 171 VKEAVETFEKMEKYGLKPEVSD--FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSY 228
VKE +ME++G V++ F L+ KA LFD MR +GLVP Y
Sbjct: 163 VKEVELLLMEMERHG-DTMVNEGIFCDLIGKYVDDFDSRKAVMLFDWMRRKGLVPLTSCY 221
Query: 229 TILLEGWSQQQNLLRVNEVCR---EMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHE 285
IL++ + +C E + E ++ + G +I C +K EA +
Sbjct: 222 QILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGKVIELLCLDQKVQEARVLARK 281
Query: 286 MQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMR 345
+ + + I+S + G + ++ L F + K + P+ N ++ + C
Sbjct: 282 LVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEVK---YEPDVFVGNRILHSLCRRFG 338
Query: 346 MDDAYRVVDEMKQCGVGPNSRTYDIIL 372
+ AY ++E++ G + T+ I++
Sbjct: 339 SERAYVYMEELEHLGFKQDEVTFGILI 365
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 183 KYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLL 242
K GL PE N L+D+ K S+ +A+ +FD M +R D+ S++ L+ G++Q
Sbjct: 501 KTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNR----DVVSWSTLIVGYAQSGFGE 556
Query: 243 RVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ-EKNMMPSPHIFSTL 301
+ +EMK EP+ VT+ ++ A +E + Y MQ E + P+ S +
Sbjct: 557 EALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCV 616
Query: 302 INGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
++ L RL+EA F ++ K P+ + ++ A
Sbjct: 617 VDLLARAGRLNEAERFIDEMK---LEPDVVVWKTLLSA 651
>AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2435007-2439344 REVERSE
LENGTH=821
Length = 821
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 87/199 (43%), Gaps = 4/199 (2%)
Query: 171 VKEAVETFEKM-EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYT 229
V++ + F KM E+ + P + + KLV C S V A ++ +KM GL+
Sbjct: 353 VEDTILKFNKMHEELDVMPSSTSYEKLVKYSCDSNEVVTALDVVEKMGEAGLMISADILH 412
Query: 230 ILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEK 289
LL + V + M + +P+ + +I + K ++ A ++
Sbjct: 413 SLLHAIDEVLEFDLVRRIHSIMCTKSVKPNTENFRSIIRLCTRIKDFEGAYNMLGNLKNF 472
Query: 290 NMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA 349
N+ P+ +F+ ++ G +K + AL ++ K G P++ T+ ++ C + D
Sbjct: 473 NLEPNSSMFNCILAGYFREKNVSSALMVVKQMKEAGVKPDSITFGYLINN-C--TQEDAI 529
Query: 350 YRVVDEMKQCGVGPNSRTY 368
+ +EMKQ GV R Y
Sbjct: 530 TKYYEEMKQAGVQATKRIY 548
>AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16983638-16986681 FORWARD
LENGTH=444
Length = 444
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%)
Query: 256 FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEAL 315
+ D+ Y +N+ +++ Y +M+ + P+ IF + + G RL +A
Sbjct: 37 YANDLSEYNTAVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGTMKGARLSDAF 96
Query: 316 EFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIIL 372
F E+ KA G AP+ YN ++ +A RV DEMK+ V PN +T+ +L
Sbjct: 97 FFREEMKAMGIAPDVNLYNFLISTCGKCKNGKEAIRVYDEMKRYDVKPNGQTFVCLL 153
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%)
Query: 214 DKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKA 273
+++ R DL Y + + Q+ + +V +MK + +P + + K
Sbjct: 30 EEIAKRNYANDLSEYNTAVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGTMKG 89
Query: 274 KKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTY 333
+ +A F EM+ + P ++++ LI+ G K EA+ Y++ K P T+
Sbjct: 90 ARLSDAFFFREEMKAMGIAPDVNLYNFLISTCGKCKNGKEAIRVYDEMKRYDVKPNGQTF 149
Query: 334 NAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTY 368
++ A S ++D Y +V +M GVG N Y
Sbjct: 150 VCLLNACAVSGQLDLVYAIVRDMTAAGVGLNQFCY 184
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 66/162 (40%)
Query: 179 EKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQ 238
E++ K ++S++N V+ + + ++++D M+ G+ P + + G +
Sbjct: 30 EEIAKRNYANDLSEYNTAVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGTMKG 89
Query: 239 QNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIF 298
L EMK PDV Y LI+ K K EA+ Y EM+ ++ P+ F
Sbjct: 90 ARLSDAFFFREEMKAMGIAPDVNLYNFLISTCGKCKNGKEAIRVYDEMKRYDVKPNGQTF 149
Query: 299 STLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
L+N +LD A G Y ++ A+
Sbjct: 150 VCLLNACAVSGQLDLVYAIVRDMTAAGVGLNQFCYAGLITAH 191
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 78/169 (46%), Gaps = 8/169 (4%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
KE + + K G ++ L+ + ++ +E A ++FDK HR D+ SYT L
Sbjct: 151 KEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR----DVVSYTAL 206
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
++G++ + + ++ E+ + DVV++ +I+ Y + Y EA+ + +M + N+
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNV 262
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAY 340
P T+++ ++ + + +GF NA++ Y
Sbjct: 263 RPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLY 311
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Query: 239 QNLLRVNEV------CREMKCECFEPDVVTYGILINAYCKAKKYDEAVG-FYHEMQEKNM 291
Q+L+R +++ R+ P V T +I A +AK+Y E++ F + ++ N+
Sbjct: 153 QSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNI 212
Query: 292 MPSPHIFSTLINGLGSDKRLDEALEFYEKFKANG-FAPETPTYNAVVGAYCWSMRMDDAY 350
+P+ ++ +IN + +DEALE Y AN FAP + TY + + R+ DA
Sbjct: 213 VPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAA 272
Query: 351 RVVDEMKQCGVGPNSRTYDIILQ 373
++ EM G +S Y+ +++
Sbjct: 273 SLLREMLSKGQAADSTVYNNLIR 295
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 18/205 (8%)
Query: 170 KVKEAVETFEKM-EKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDK-MRHRGLVPDLKS 227
+ E++ F+ ++ + P V +N++++ C +V++A E++ + + P +
Sbjct: 195 RYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVT 254
Query: 228 YTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQ 287
Y L +G Q + + REM + D Y LI Y +D+AV F+ E++
Sbjct: 255 YRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELK 314
Query: 288 EKNMMPSPHIFSTLINGL--------GSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
K ++ ++N G+DK EA+E Y F PT N ++
Sbjct: 315 SKCT-----VYDGIVNATFMEYWFEKGNDK---EAMESYRSLLDKKFRMHPPTGNVLLEV 366
Query: 340 YCWSMRMDDAYRVVDEMKQCGVGPN 364
+ + D+A+ + +EM PN
Sbjct: 367 FLKFGKKDEAWALFNEMLDNHAPPN 391
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 7/155 (4%)
Query: 187 KPEVSDFNKLVDVLCKSKSVEKAQELFDKM-RHRGLVPDLKSYTILLEGWSQQQNLLRVN 245
+P V N ++ + ++K ++ LF + +VP++ SY ++ + N+
Sbjct: 177 RPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEAL 236
Query: 246 EVCREMKCEC-FEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLING 304
EV R + F P VTY L +A + +A EM K +++ LI G
Sbjct: 237 EVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRG 296
Query: 305 LGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGA 339
D+A+EF+++ K+ + Y+ +V A
Sbjct: 297 YLDLGDFDKAVEFFDELKS-----KCTVYDGIVNA 326
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 90/184 (48%), Gaps = 5/184 (2%)
Query: 173 EAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILL 232
+AVE +++M G+KP+V F ++ + ++EK +++ + L D + LL
Sbjct: 393 KAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALL 452
Query: 233 EGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMM 292
+ +S+ N + + + DVV++ ++I+AY + EA+ + EMQ+ +
Sbjct: 453 DMYSKCGNEKEAFRIFNSIP----KKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLK 508
Query: 293 PSPHIFSTLINGLGSDKRLDEALEFYEKFKAN-GFAPETPTYNAVVGAYCWSMRMDDAYR 351
P +++ G +DE L+F+ + ++ G P Y+ ++ + R+ +AY
Sbjct: 509 PDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYE 568
Query: 352 VVDE 355
++ +
Sbjct: 569 IIQQ 572
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 81/166 (48%), Gaps = 5/166 (3%)
Query: 208 KAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILI 267
KA E++D+M G+ PD+ ++T +L SQ L + ++ + E D + L+
Sbjct: 393 KAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALL 452
Query: 268 NAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFA 327
+ Y K EA ++ + +K+++ ++ +I+ GS + EAL +++ + G
Sbjct: 453 DMYSKCGNEKEAFRIFNSIPKKDVVS----WTVMISAYGSHGQPREALYQFDEMQKFGLK 508
Query: 328 PETPTYNAVVGAYCWSMRMDDAYRVVDEMK-QCGVGPNSRTYDIIL 372
P+ T AV+ A + +D+ + +M+ + G+ P Y ++
Sbjct: 509 PDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMI 554
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 9/165 (5%)
Query: 193 FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK 252
+N ++D +E A LF +M +R D S+ +++ G++ N+ E+ R
Sbjct: 315 WNTMIDGYVHVSRMEDAFALFSEMPNR----DAHSWNMMVSGYASVGNV----ELARHYF 366
Query: 253 CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD 312
+ E V++ +I AY K K Y EAV + M + P PH ++L++ L
Sbjct: 367 EKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLR 426
Query: 313 EALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMK 357
++ ++ P+ P +NA++ Y + ++ R+ DEMK
Sbjct: 427 LGMQMHQ-IVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMK 470
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 82/186 (44%), Gaps = 5/186 (2%)
Query: 193 FNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTILLEGWSQQQNLLRVNEVCREMK 252
+N ++ K+K ++A +LF +M G PD + T LL + NL R+ ++
Sbjct: 377 WNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNL-RLGMQMHQIV 435
Query: 253 CECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLD 312
+ PDV + LI Y + + E+ + EM+ K + + ++ +I G
Sbjct: 436 VKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVIT---WNAMIGGYAFHGNAS 492
Query: 313 EALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDA-YRVVDEMKQCGVGPNSRTYDII 371
EAL + K+NG P T+ +V+ A + +D+A + V M + P Y +
Sbjct: 493 EALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSL 552
Query: 372 LQPDKG 377
+ G
Sbjct: 553 VNVTSG 558
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 81/186 (43%), Gaps = 5/186 (2%)
Query: 172 KEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTIL 231
KEAV+ F +M G KP+ L+ ++ ++ ++ + ++PD+ + L
Sbjct: 391 KEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQM-HQIVVKTVIPDVPVHNAL 449
Query: 232 LEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNM 291
+ +S+ ++ + EMK + +V+T+ +I Y EA+ + M+ +
Sbjct: 450 ITMYSRCGEIMESRRIFDEMK---LKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGI 506
Query: 292 MPSPHIFSTLINGLGSDKRLDEA-LEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
PS F +++N +DEA +F P+ Y+++V + ++A
Sbjct: 507 YPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAM 566
Query: 351 RVVDEM 356
++ M
Sbjct: 567 YIITSM 572
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 92/210 (43%), Gaps = 7/210 (3%)
Query: 171 VKEAVETFEKMEKYGLKPEVSDFNKLVDVLCKSKSVEKAQELFDKMRHRGLVPDLKSYTI 230
++A+E F+ M + G +P + L + +E+ + + M G +
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302
Query: 231 LLEGWSQQQNLLRVNEVCREMKCECFEPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKN 290
LL+ +++ ++ ++ + + DVV++ L+ AY + EAV ++ EM+
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLA----KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358
Query: 291 MMPSPHIFSTLINGLGSDKRLDEALEFYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAY 350
+ P+ F +++ LDE +YE K +G PE Y VV + ++ A
Sbjct: 359 IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRAL 418
Query: 351 RVVDEMKQCGVGPNSRTYDIILQPDKGSKN 380
R ++EM + P + + +L + KN
Sbjct: 419 RFIEEMP---IEPTAAIWKALLNACRMHKN 445
>AT2G01860.1 | Symbols: EMB975 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:388283-389743 FORWARD
LENGTH=486
Length = 486
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 257 EPDVVTYGILINAYCKAKKYDEAVGFYHEMQEKNMMPSPHIFSTLINGLGSDKRLDEALE 316
EP VV Y +I++ +KY EA+ EM+E N + + +I + L A+
Sbjct: 360 EPSVVMYTTMIHSRYSEQKYREAMSVVWEMEESNCLLDLPAYRVVIKLFVALDDLGRAMR 419
Query: 317 FYEKFKANGFAPETPTYNAVVGAYCWSMRMDDAYRVVDEMKQCGVGPNSRTYDIILQPDK 376
+Y K K GF+P Y ++ Y S R+ + E++ G+ + T +LQ +K
Sbjct: 420 YYSKLKEAGFSPTYDIYRDMISVYTASGRLTKCKEICKEVEDAGLRLDKDTSFRLLQLEK 479
Query: 377 GS 378
+
Sbjct: 480 QT 481