Miyakogusa Predicted Gene

Lj5g3v2146950.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2146950.1 Non Chatacterized Hit- tr|I0YKM7|I0YKM7_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea C-,33.15,2e-17,
,CUFF.56832.1
         (359 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G01720.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   603   e-173

>AT3G01720.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: endomembrane
           system; EXPRESSED IN: 24 plant structures; EXPRESSED
           DURING: 13 growth stages; BEST Arabidopsis thaliana
           protein match is: unknown protein (TAIR:AT5G25265.1);
           Has 374 Blast hits to 211 proteins in 23 species: Archae
           - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 316;
           Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
           | chr3:262412-265608 REVERSE LENGTH=802
          Length = 802

 Score =  603 bits (1554), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 277/360 (76%), Positives = 319/360 (88%), Gaps = 2/360 (0%)

Query: 1   MYGYSFGAAEIGLRHKINDNLMLYPGYVPREGIEPILLHYGLPFSVGNWSFNKLAHHDDG 60
           MYGYSFGAAE GL+HKIND+LM+YPGYVPREG+EP+L+HYGLPFS+GNWSF KL HH+D 
Sbjct: 228 MYGYSFGAAEAGLKHKINDDLMIYPGYVPREGVEPVLMHYGLPFSIGNWSFTKLDHHEDN 287

Query: 61  IVYECGRLFPEPPYPKEVKQLELDSNRRRGLFISIECMNILNEGLLLQHAANGCPKPAWS 120
           IVY+C RLFPEPPYP+EVK +E D ++RRGL +S+ECMN LNEGL+L+HA NGCPKP W+
Sbjct: 288 IVYDCNRLFPEPPYPREVKIMEPDPSKRRGLILSLECMNTLNEGLILRHAENGCPKPKWT 347

Query: 121 KYLSFLKSKAFAELTKPKYVTPATLQMMEDTVEKH-VDLAAGKPHPKIHTVFSTECTTYF 179
           KYLSFLKSK F ELT+PK + P ++ ++ D  E   +D   G  +PKIHT+FSTECTTYF
Sbjct: 348 KYLSFLKSKTFMELTRPKLLAPGSVHILPDQHEPPPIDEFKGT-YPKIHTLFSTECTTYF 406

Query: 180 DWQTVGLMHSFRTSGQPGNITRLLSCSDEDLKQYKGHDLAPTHYVPSMSQHPLTGDWYPA 239
           DWQTVG MHSFR SGQPGNITRLLSC+DE LK YKGHDLAPTHYVPSMS+HPLTGDWYPA
Sbjct: 407 DWQTVGFMHSFRQSGQPGNITRLLSCTDEALKNYKGHDLAPTHYVPSMSRHPLTGDWYPA 466

Query: 240 INKPAAVLHWLNHANIDAEFIVILDADMILRGPITPWEFKAARGHPVSTPYDYLIGCDNE 299
           INKPAAV+HWL+H NIDAE++VILDADMILRGPITPWEFKAARG PVSTPYDYLIGCDN+
Sbjct: 467 INKPAAVVHWLHHTNIDAEYVVILDADMILRGPITPWEFKAARGRPVSTPYDYLIGCDND 526

Query: 300 LAKLHTSHPEACDKVGGVIIMHIDDLRKFALLWLHKTEEVRADRAHYARNITGDIYESGW 359
           LA+LHT +PEACDKVGGVIIMHI+DLRKFA+ WL KT+EVRAD+ HY + +TGDIYESGW
Sbjct: 527 LARLHTRNPEACDKVGGVIIMHIEDLRKFAMYWLLKTQEVRADKEHYGKELTGDIYESGW 586



 Score =  275 bits (704), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 128/196 (65%), Positives = 149/196 (76%), Gaps = 2/196 (1%)

Query: 166 KIHTVFSTECTTYFDWQTVGLMHSFRTSGQPGNITRLLSCSDEDLKQYKGHDLAPTHYVP 225
           +IHT+FS EC  YFDWQTVGLMHSF  SGQPG ITRLLSC+D+  K Y+G +LAPT  VP
Sbjct: 29  RIHTLFSVECQNYFDWQTVGLMHSFLKSGQPGPITRLLSCTDDQKKTYRGMNLAPTFEVP 88

Query: 226 SMSQHPLTGDWYPAINKPAAVLHWLNHAN--IDAEFIVILDADMILRGPITPWEFKAARG 283
           S S+HP TGDWYPAINKP  VL+WL H+      +++VILDADMI+RGPI PWE  A RG
Sbjct: 89  SWSRHPKTGDWYPAINKPVGVLYWLQHSEEAKHVDWVVILDADMIIRGPIIPWELGAERG 148

Query: 284 HPVSTPYDYLIGCDNELAKLHTSHPEACDKVGGVIIMHIDDLRKFALLWLHKTEEVRADR 343
            P +  Y YL+GCDN L +LHT HPE CDKVGG++ MHIDDLR  A LWL KTE+VR D 
Sbjct: 149 RPFAAHYGYLVGCDNLLVRLHTKHPELCDKVGGLLAMHIDDLRVLAPLWLSKTEDVRQDT 208

Query: 344 AHYARNITGDIYESGW 359
           AH+  N+TGDIY  GW
Sbjct: 209 AHWTTNLTGDIYGKGW 224



 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 58/118 (49%), Positives = 74/118 (62%), Gaps = 2/118 (1%)

Query: 1   MYGYSFGAAEIGLRHKINDNLMLYPGYVPREGIEPILLHYGLPFSVGNWSFNKLAHHDDG 60
           MYGYSFGAAE+ LRH IN  +M+YPGYVP  G +  + HYGL F VGNWSF+K    +  
Sbjct: 590 MYGYSFGAAELNLRHSINKEIMIYPGYVPEPGADYRVFHYGLEFKVGNWSFDKANWRNTD 649

Query: 61  IVYECGRLFPEPPYPKEVKQLELDSNRRRGLFISIECMNILNEGLLLQHAANGCPKPA 118
           ++ +C   FP+PP P  V Q   D++ R+   +SIEC   LNE L L H    CP+P 
Sbjct: 650 LINKCWAKFPDPPSPSAVHQ--TDNDLRQRDLLSIECGQKLNEALFLHHKRRNCPEPG 705