Miyakogusa Predicted Gene
- Lj5g3v2113400.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2113400.1 Non Chatacterized Hit- tr|I1NFX2|I1NFX2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.966
PE=4,84.31,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; RETICULON,Reticulon;
Reticulon,Reticulon,CUFF.56724.1
(204 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G19460.1 | Symbols: | Reticulon family protein | chr3:674760... 168 2e-42
AT2G15280.1 | Symbols: | Reticulon family protein | chr2:664019... 165 1e-41
AT3G19460.2 | Symbols: | Reticulon family protein | chr3:674791... 138 2e-33
AT4G23630.1 | Symbols: BTI1, RTNLB1 | VIRB2-interacting protein ... 112 2e-25
AT1G64090.1 | Symbols: RTNLB3 | Reticulan like protein B3 | chr1... 108 2e-24
AT3G10260.2 | Symbols: | Reticulon family protein | chr3:317141... 107 6e-24
AT3G10260.1 | Symbols: | Reticulon family protein | chr3:317141... 107 6e-24
AT3G10260.3 | Symbols: | Reticulon family protein | chr3:317141... 107 6e-24
AT4G11220.1 | Symbols: BTI2, RTNLB2 | VIRB2-interacting protein ... 107 6e-24
AT5G41600.1 | Symbols: BTI3, RTNLB4 | VIRB2-interacting protein ... 106 1e-23
AT3G10915.2 | Symbols: | Reticulon family protein | chr3:341610... 105 2e-23
AT2G46170.1 | Symbols: | Reticulon family protein | chr2:189654... 103 7e-23
AT3G18260.1 | Symbols: | Reticulon family protein | chr3:626032... 102 1e-22
AT1G64090.2 | Symbols: RTNLB3 | Reticulan like protein B3 | chr1... 102 2e-22
AT3G10915.4 | Symbols: | Reticulon family protein | chr3:341610... 102 2e-22
AT2G15280.2 | Symbols: | Reticulon family protein | chr2:664019... 102 2e-22
AT3G61560.1 | Symbols: | Reticulon family protein | chr3:227779... 95 3e-20
AT3G10915.3 | Symbols: | Reticulon family protein | chr3:341610... 94 6e-20
AT3G10915.6 | Symbols: | Reticulon family protein | chr3:341610... 94 6e-20
AT3G10915.5 | Symbols: | Reticulon family protein | chr3:341610... 91 7e-19
AT3G54120.1 | Symbols: | Reticulon family protein | chr3:200412... 86 2e-17
AT4G01230.1 | Symbols: | Reticulon family protein | chr4:516264... 78 4e-15
AT2G23640.1 | Symbols: RTNLB13 | Reticulan like protein B13 | ch... 65 2e-11
AT1G68230.2 | Symbols: | Reticulon family protein | chr1:255721... 58 5e-09
AT3G10915.1 | Symbols: | Reticulon family protein | chr3:341657... 56 2e-08
AT2G46170.2 | Symbols: | Reticulon family protein | chr2:189654... 54 8e-08
>AT3G19460.1 | Symbols: | Reticulon family protein |
chr3:6747600-6748904 FORWARD LENGTH=200
Length = 200
Score = 168 bits (426), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 115/195 (58%), Gaps = 8/195 (4%)
Query: 10 HHALGAGSVADVLLWKNWRGGVTVLVSATALWYLFERAGYNXXXXXXXXXXXXXXXXXXW 69
H +LGAGSVAD+LLW+N G V +L+S+T W+LFERAGYN W
Sbjct: 14 HQSLGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLW 73
Query: 70 AKAAXXXXXXXXXXXDLEISEETIARVADSLQIWLNRVLSLAHDIAIKRNLLLCLQVVGA 129
AK+A ++EI EE + AD L++W+N VLS+A DI I RN + LQV
Sbjct: 74 AKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVSLV 133
Query: 130 LWVISYIGSLFNFLTLIYIGVLLSLSLPVLYDKYQDQINDKLYLVHGIYLTQYKTIHRVV 189
LW ISY+G+L N LTL+YIGVLLSLS P++Y+KYQD I++K + R +
Sbjct: 134 LWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHIDEK--------VNSTSKFVRNI 185
Query: 190 LSKIPKFTNKEKKVQ 204
K P NKEKK Q
Sbjct: 186 SRKFPLPINKEKKHQ 200
>AT2G15280.1 | Symbols: | Reticulon family protein |
chr2:6640191-6641414 FORWARD LENGTH=201
Length = 201
Score = 165 bits (418), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 124/198 (62%), Gaps = 1/198 (0%)
Query: 8 SVHHALGAGSVADVLLWKNWRGGVTVLVSATALWYLFERAGYNXXXXXXXXXXXXXXXXX 67
SVH ++ GSVAD+++WKN RGG +L S T LW+LFE+ GY+
Sbjct: 4 SVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILF 63
Query: 68 XWAKAAXXXXXXXXXXXDLEISEETIARVADSLQIWLNRVLSLAHDIAIKRNLLLCLQVV 127
WAK+A +LEI+EE + VAD++++W+N VL++A +I + RN +V
Sbjct: 64 LWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVS 123
Query: 128 GALWVISYIGSLFNFLTLIYIGVLLSLSLPVLYDKYQDQINDKLYLVHGIYLTQYKTIHR 187
LW +S++G+ NFLT++Y+GV+LSL +P LY++YQD I++KL L H + TQY+ I
Sbjct: 124 VVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKIDE 183
Query: 188 VVLSK-IPKFTNKEKKVQ 204
+L K I K TNK KK+Q
Sbjct: 184 RLLQKIIAKPTNKIKKMQ 201
>AT3G19460.2 | Symbols: | Reticulon family protein |
chr3:6747913-6748904 FORWARD LENGTH=218
Length = 218
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/222 (37%), Positives = 109/222 (49%), Gaps = 42/222 (18%)
Query: 17 SVADVLLWKNWRGGVTVLVSATALWYLFERAGYNXXXXXXXXXXXXXXXXXXWAKAAXXX 76
+VAD+LLW+N G V +L+S+T W+LFERAGYN WAK+A
Sbjct: 5 AVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVL 64
Query: 77 XXXXXXXXDLEISEETIARVADSLQIWLNRVLSLAHDIAIKRNLLLCLQVVG-------- 128
++EI EE + AD L++W+N VLS+A DI I RN + LQV
Sbjct: 65 NRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVFFHHLWQTIC 124
Query: 129 --------------------------ALWVISYIGSLFNFLTLIYIGVLLSLSLPVLYDK 162
LW ISY+G+L N LTL+YIGVLLSLS P++Y+K
Sbjct: 125 CIFLFLHVMYLTVHISFVFAVKQVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEK 184
Query: 163 YQDQINDKLYLVHGIYLTQYKTIHRVVLSKIPKFTNKEKKVQ 204
YQD I++K + R + K P NKEKK Q
Sbjct: 185 YQDHIDEK--------VNSTSKFVRNISRKFPLPINKEKKHQ 218
>AT4G23630.1 | Symbols: BTI1, RTNLB1 | VIRB2-interacting protein 1 |
chr4:12318070-12319574 FORWARD LENGTH=275
Length = 275
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 97/196 (49%), Gaps = 2/196 (1%)
Query: 8 SVHHALGAGSVADVLLWKNWRGGVTVLVSATALWYLFERAGYNXXXXXXXXXXXXXXXXX 67
VH LG G AD+ +WKN + VL ATA W +FE Y+
Sbjct: 79 PVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLF 138
Query: 68 XWAKAAXXXXXXXXXXXDLEISEETIARVADSLQIWLNRVLSLAHDIAIKRNLLLCLQVV 127
W+ A ++ I EE I ++A L+I +NR S +IA R+L L +
Sbjct: 139 LWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAI 198
Query: 128 GALWVISYIGSLFNFLTLIYIGVLLSLSLPVLYDKYQDQINDKLYLVHGIYL-TQYKTIH 186
LWV+S +G FNFLTL YI ++L ++P+ YDKY+D++ D L I L QY +
Sbjct: 199 AGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKV-DPLGEKAMIELKKQYAVLD 257
Query: 187 RVVLSKIPKFTNKEKK 202
VLSKIP K KK
Sbjct: 258 EKVLSKIPLGPLKNKK 273
>AT1G64090.1 | Symbols: RTNLB3 | Reticulan like protein B3 |
chr1:23789395-23790669 FORWARD LENGTH=255
Length = 255
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 98/191 (51%), Gaps = 4/191 (2%)
Query: 9 VHHALGAGSVADVLLWKNWRGGVTVLVSATALWYLFERAGYNXXXXXXXXXXXXXXXXXX 68
+H G G AD+ LW+N + VL +AT W LFE YN
Sbjct: 55 LHKLFGGGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFL 114
Query: 69 WAKAAXXXXXXXXXXXDLEISEETIARVADSLQIWLNRVLSLAHDIAIKRNLLLCLQVVG 128
W+ A+ ++ I E+ + ++A L+I +NR ++ DIA R+L L V+
Sbjct: 115 WSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIA 174
Query: 129 ALWVISYIGSLFNFLTLIYIGVLLSLSLPVLYDKYQDQIND----KLYLVHGIYLTQYKT 184
LWV+S +GS NFLTLIYI +L ++PVLY+KY+D+++D + + Y+
Sbjct: 175 GLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVK 234
Query: 185 IHRVVLSKIPK 195
+ V+SKIPK
Sbjct: 235 VLSKVMSKIPK 245
>AT3G10260.2 | Symbols: | Reticulon family protein |
chr3:3171413-3172508 REVERSE LENGTH=247
Length = 247
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 2/196 (1%)
Query: 9 VHHALGAGSVADVLLWKNWRGGVTVLVSATALWYLFERAGYNXXXXXXXXXXXXXXXXXX 68
+HH LG G ADVLLW+N + +VL+ ATA+W LFE ++
Sbjct: 52 IHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFV 111
Query: 69 WAKAAXXXXXXXXXXXDLEISEETIARVADSLQIWLNRVLSLAHDIAIKRNLLLCLQVVG 128
W+ A+ L + ++ A V ++ +NR L D+A K NL L V
Sbjct: 112 WSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVI 171
Query: 129 ALWVISYIGSLFNFLTLIYIGVLLSLSLPVLYDKYQDQINDKLYLVHGIYLTQYKTIHRV 188
LWV + +GS NFLT++YIG + + ++PVLY++Y+D+++ + + + + YK +
Sbjct: 172 GLWVAAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTG 231
Query: 189 VLSKIP--KFTNKEKK 202
LS+IP KF K+++
Sbjct: 232 FLSRIPSGKFGLKKRE 247
>AT3G10260.1 | Symbols: | Reticulon family protein |
chr3:3171413-3172508 REVERSE LENGTH=247
Length = 247
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 2/196 (1%)
Query: 9 VHHALGAGSVADVLLWKNWRGGVTVLVSATALWYLFERAGYNXXXXXXXXXXXXXXXXXX 68
+HH LG G ADVLLW+N + +VL+ ATA+W LFE ++
Sbjct: 52 IHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFV 111
Query: 69 WAKAAXXXXXXXXXXXDLEISEETIARVADSLQIWLNRVLSLAHDIAIKRNLLLCLQVVG 128
W+ A+ L + ++ A V ++ +NR L D+A K NL L V
Sbjct: 112 WSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVI 171
Query: 129 ALWVISYIGSLFNFLTLIYIGVLLSLSLPVLYDKYQDQINDKLYLVHGIYLTQYKTIHRV 188
LWV + +GS NFLT++YIG + + ++PVLY++Y+D+++ + + + + YK +
Sbjct: 172 GLWVAAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTG 231
Query: 189 VLSKIP--KFTNKEKK 202
LS+IP KF K+++
Sbjct: 232 FLSRIPSGKFGLKKRE 247
>AT3G10260.3 | Symbols: | Reticulon family protein |
chr3:3171413-3172568 REVERSE LENGTH=267
Length = 267
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 2/196 (1%)
Query: 9 VHHALGAGSVADVLLWKNWRGGVTVLVSATALWYLFERAGYNXXXXXXXXXXXXXXXXXX 68
+HH LG G ADVLLW+N + +VL+ ATA+W LFE ++
Sbjct: 72 IHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFV 131
Query: 69 WAKAAXXXXXXXXXXXDLEISEETIARVADSLQIWLNRVLSLAHDIAIKRNLLLCLQVVG 128
W+ A+ L + ++ A V ++ +NR L D+A K NL L V
Sbjct: 132 WSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVI 191
Query: 129 ALWVISYIGSLFNFLTLIYIGVLLSLSLPVLYDKYQDQINDKLYLVHGIYLTQYKTIHRV 188
LWV + +GS NFLT++YIG + + ++PVLY++Y+D+++ + + + + YK +
Sbjct: 192 GLWVAAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTG 251
Query: 189 VLSKIP--KFTNKEKK 202
LS+IP KF K+++
Sbjct: 252 FLSRIPSGKFGLKKRE 267
>AT4G11220.1 | Symbols: BTI2, RTNLB2 | VIRB2-interacting protein 2 |
chr4:6838176-6839578 REVERSE LENGTH=271
Length = 271
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 94/195 (48%)
Query: 8 SVHHALGAGSVADVLLWKNWRGGVTVLVSATALWYLFERAGYNXXXXXXXXXXXXXXXXX 67
VH LG G AD+ +WK+ + V AT W LFE Y+
Sbjct: 75 PVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLF 134
Query: 68 XWAKAAXXXXXXXXXXXDLEISEETIARVADSLQIWLNRVLSLAHDIAIKRNLLLCLQVV 127
W+ A ++ I EE + ++A L+I +NR +S +IA R++ L +
Sbjct: 135 LWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAI 194
Query: 128 GALWVISYIGSLFNFLTLIYIGVLLSLSLPVLYDKYQDQINDKLYLVHGIYLTQYKTIHR 187
LWV+S +G ++FLTL YI ++L ++P+ YDKY+D+++ QY +
Sbjct: 195 AGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDA 254
Query: 188 VVLSKIPKFTNKEKK 202
V SKIP+ K+KK
Sbjct: 255 KVFSKIPRGPLKDKK 269
>AT5G41600.1 | Symbols: BTI3, RTNLB4 | VIRB2-interacting protein 3 |
chr5:16636230-16637472 FORWARD LENGTH=257
Length = 257
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 4/199 (2%)
Query: 8 SVHHALGAGSVADVLLWKNWRGGVTVLVSATALWYLFERAGYNXXXXXXXXXXXXXXXXX 67
VH LG G AD+ LW+N + VL + TA W LFE Y+
Sbjct: 58 PVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALF 117
Query: 68 XWAKAAXXXXXXXXXXXDLEISEETIARVADSLQIWLNRVLSLAHDIAIKRNLLLCLQVV 127
W+ A ++ I E+ I ++ L+I +NR L+L +IA +++ + V+
Sbjct: 118 LWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVI 177
Query: 128 GALWVISYIGSLFNFLTLIYIGVLLSLSLPVLYDKYQDQIN----DKLYLVHGIYLTQYK 183
LWV+S IGS +NFLTL Y +L ++PVLY+KY+D+++ + + Y +
Sbjct: 178 AGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDE 237
Query: 184 TIHRVVLSKIPKFTNKEKK 202
+ R V+SKIP+ +KK
Sbjct: 238 KVLRKVISKIPRGALNKKK 256
>AT3G10915.2 | Symbols: | Reticulon family protein |
chr3:3416101-3417497 REVERSE LENGTH=226
Length = 226
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 100/196 (51%)
Query: 6 RISVHHALGAGSVADVLLWKNWRGGVTVLVSATALWYLFERAGYNXXXXXXXXXXXXXXX 65
+I+VH +G G AD+LLW+ + V++ +T W +FE +G
Sbjct: 29 QITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMI 88
Query: 66 XXXWAKAAXXXXXXXXXXXDLEISEETIARVADSLQIWLNRVLSLAHDIAIKRNLLLCLQ 125
A+ + +L +SEE + A S +I LN +L +AHD+ + + L +
Sbjct: 89 SFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFK 148
Query: 126 VVGALWVISYIGSLFNFLTLIYIGVLLSLSLPVLYDKYQDQINDKLYLVHGIYLTQYKTI 185
VV LW++S IGS + TL+YIG +LS+++P LY KYQ +++ +H YK +
Sbjct: 149 VVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIV 208
Query: 186 HRVVLSKIPKFTNKEK 201
V+S++ +K+K
Sbjct: 209 DENVISRLSWSLSKDK 224
>AT2G46170.1 | Symbols: | Reticulon family protein |
chr2:18965410-18966940 FORWARD LENGTH=255
Length = 255
Score = 103 bits (257), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 95/194 (48%)
Query: 8 SVHHALGAGSVADVLLWKNWRGGVTVLVSATALWYLFERAGYNXXXXXXXXXXXXXXXXX 67
VH LG G ADV LW++ + VL ATA+W LFE Y+
Sbjct: 58 PVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLF 117
Query: 68 XWAKAAXXXXXXXXXXXDLEISEETIARVADSLQIWLNRVLSLAHDIAIKRNLLLCLQVV 127
W+ A ++ + EE VA SL+ LN+ + IA+ R+L L VV
Sbjct: 118 LWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVV 177
Query: 128 GALWVISYIGSLFNFLTLIYIGVLLSLSLPVLYDKYQDQINDKLYLVHGIYLTQYKTIHR 187
LW+IS +G+ FNFLTL+YI ++ ++P+LY+K++D+++ QY
Sbjct: 178 VGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDE 237
Query: 188 VVLSKIPKFTNKEK 201
VLSKIP + K K
Sbjct: 238 KVLSKIPIASLKAK 251
>AT3G18260.1 | Symbols: | Reticulon family protein |
chr3:6260328-6261504 REVERSE LENGTH=225
Length = 225
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 97/195 (49%)
Query: 8 SVHHALGAGSVADVLLWKNWRGGVTVLVSATALWYLFERAGYNXXXXXXXXXXXXXXXXX 67
S+H G G VAD+LLW+ + T+++ + LW+L E YN
Sbjct: 29 SIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHASMTSMLFFF 88
Query: 68 XWAKAAXXXXXXXXXXXDLEISEETIARVADSLQIWLNRVLSLAHDIAIKRNLLLCLQVV 127
W+ A+ ++ + E + ++A S + N++L+ D+A R+ L
Sbjct: 89 IWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPPLFFLTT 148
Query: 128 GALWVISYIGSLFNFLTLIYIGVLLSLSLPVLYDKYQDQINDKLYLVHGIYLTQYKTIHR 187
+L+++S IG+ FNF+ L++IG + +LPV+Y+ Y+D ++ + YK +
Sbjct: 149 ISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMKKLYKKVDT 208
Query: 188 VVLSKIPKFTNKEKK 202
VLSKIP+ T K KK
Sbjct: 209 NVLSKIPRGTVKNKK 223
>AT1G64090.2 | Symbols: RTNLB3 | Reticulan like protein B3 |
chr1:23789395-23790669 FORWARD LENGTH=271
Length = 271
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 95/183 (51%), Gaps = 4/183 (2%)
Query: 17 SVADVLLWKNWRGGVTVLVSATALWYLFERAGYNXXXXXXXXXXXXXXXXXXWAKAAXXX 76
+ AD+ LW+N + VL +AT W LFE YN W+ A+
Sbjct: 79 AAADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFI 138
Query: 77 XXXXXXXXDLEISEETIARVADSLQIWLNRVLSLAHDIAIKRNLLLCLQVVGALWVISYI 136
++ I E+ + ++A L+I +NR ++ DIA R+L L V+ LWV+S +
Sbjct: 139 HKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKV 198
Query: 137 GSLFNFLTLIYIGVLLSLSLPVLYDKYQDQIND----KLYLVHGIYLTQYKTIHRVVLSK 192
GS NFLTLIYI +L ++PVLY+KY+D+++D + + Y+ + V+SK
Sbjct: 199 GSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKVMSK 258
Query: 193 IPK 195
IPK
Sbjct: 259 IPK 261
>AT3G10915.4 | Symbols: | Reticulon family protein |
chr3:3416101-3417497 REVERSE LENGTH=227
Length = 227
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 1/197 (0%)
Query: 6 RISVHHALGAGSVADVLLWKNWRGGVTVLVSATALWYLFERAGYNXXXXXXXXXXXXXXX 65
+I+VH +G G AD+LLW+ + V++ +T W +FE +G
Sbjct: 29 QITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMI 88
Query: 66 XXXWAKAAXXXXXXXXXXXDLEISEETIARVADSLQIWLNRVLSLAHDIAIKRNLLLCL- 124
A+ + +L +SEE + A S +I LN +L +AHD+ + + L
Sbjct: 89 SFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFK 148
Query: 125 QVVGALWVISYIGSLFNFLTLIYIGVLLSLSLPVLYDKYQDQINDKLYLVHGIYLTQYKT 184
QVV LW++S IGS + TL+YIG +LS+++P LY KYQ +++ +H YK
Sbjct: 149 QVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKI 208
Query: 185 IHRVVLSKIPKFTNKEK 201
+ V+S++ +K+K
Sbjct: 209 VDENVISRLSWSLSKDK 225
>AT2G15280.2 | Symbols: | Reticulon family protein |
chr2:6640191-6641414 FORWARD LENGTH=162
Length = 162
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 94/198 (47%), Gaps = 40/198 (20%)
Query: 8 SVHHALGAGSVADVLLWKNWRGGVTVLVSATALWYLFERAGYNXXXXXXXXXXXXXXXXX 67
SVH ++ GSVAD+++WKN RGG +L S T LW+LFE+ GY+
Sbjct: 4 SVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILF 63
Query: 68 XWAKAAXXXXXXXXXXXDLEISEETIARVADSLQIWLNRVLSLAHDIAIKRNLLLCLQVV 127
WAK+A +LEI+EE + VAD++++W+N VL++A +I + RN
Sbjct: 64 LWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRN-------- 115
Query: 128 GALWVISYIGSLFNFLTLIYIGVLLSLSLPVLYDKYQDQINDKLYLVHGIYLTQYKTIHR 187
++D I++KL L H + TQY+ I
Sbjct: 116 -------------------------------AKQLFRDLIDEKLSLTHRVIQTQYRKIDE 144
Query: 188 VVLSK-IPKFTNKEKKVQ 204
+L K I K TNK KK+Q
Sbjct: 145 RLLQKIIAKPTNKIKKMQ 162
>AT3G61560.1 | Symbols: | Reticulon family protein |
chr3:22777918-22779171 FORWARD LENGTH=253
Length = 253
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 90/187 (48%)
Query: 8 SVHHALGAGSVADVLLWKNWRGGVTVLVSATALWYLFERAGYNXXXXXXXXXXXXXXXXX 67
VH LG G ADV LW++ + +VL ATA+W LFE Y+
Sbjct: 58 PVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALF 117
Query: 68 XWAKAAXXXXXXXXXXXDLEISEETIARVADSLQIWLNRVLSLAHDIAIKRNLLLCLQVV 127
+ A ++ I EE + +L+ LN+ + IA+ R+L L VV
Sbjct: 118 LLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVV 177
Query: 128 GALWVISYIGSLFNFLTLIYIGVLLSLSLPVLYDKYQDQINDKLYLVHGIYLTQYKTIHR 187
LW+IS +G+ FNFLTL+YI ++ ++P+LY+K++D+++ Y
Sbjct: 178 FGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDE 237
Query: 188 VVLSKIP 194
VLSK+P
Sbjct: 238 KVLSKLP 244
>AT3G10915.3 | Symbols: | Reticulon family protein |
chr3:3416101-3417058 REVERSE LENGTH=193
Length = 193
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 94/190 (49%)
Query: 12 ALGAGSVADVLLWKNWRGGVTVLVSATALWYLFERAGYNXXXXXXXXXXXXXXXXXXWAK 71
AL AD+LLW+ + V++ +T W +FE +G A+
Sbjct: 2 ALFFDVAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHAR 61
Query: 72 AAXXXXXXXXXXXDLEISEETIARVADSLQIWLNRVLSLAHDIAIKRNLLLCLQVVGALW 131
+ +L +SEE + A S +I LN +L +AHD+ + + L +VV LW
Sbjct: 62 VSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLW 121
Query: 132 VISYIGSLFNFLTLIYIGVLLSLSLPVLYDKYQDQINDKLYLVHGIYLTQYKTIHRVVLS 191
++S IGS + TL+YIG +LS+++P LY KYQ +++ +H YK + V+S
Sbjct: 122 LLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVIS 181
Query: 192 KIPKFTNKEK 201
++ +K+K
Sbjct: 182 RLSWSLSKDK 191
>AT3G10915.6 | Symbols: | Reticulon family protein |
chr3:3416101-3417497 REVERSE LENGTH=194
Length = 194
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 92/183 (50%)
Query: 19 ADVLLWKNWRGGVTVLVSATALWYLFERAGYNXXXXXXXXXXXXXXXXXXWAKAAXXXXX 78
AD+LLW+ + V++ +T W +FE +G A+ +
Sbjct: 10 ADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNR 69
Query: 79 XXXXXXDLEISEETIARVADSLQIWLNRVLSLAHDIAIKRNLLLCLQVVGALWVISYIGS 138
+L +SEE + A S +I LN +L +AHD+ + + L +VV LW++S IGS
Sbjct: 70 QLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGS 129
Query: 139 LFNFLTLIYIGVLLSLSLPVLYDKYQDQINDKLYLVHGIYLTQYKTIHRVVLSKIPKFTN 198
+ TL+YIG +LS+++P LY KYQ +++ +H YK + V+S++ +
Sbjct: 130 YISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSLS 189
Query: 199 KEK 201
K+K
Sbjct: 190 KDK 192
>AT3G10915.5 | Symbols: | Reticulon family protein |
chr3:3416101-3417497 REVERSE LENGTH=249
Length = 249
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 92/184 (50%), Gaps = 1/184 (0%)
Query: 19 ADVLLWKNWRGGVTVLVSATALWYLFERAGYNXXXXXXXXXXXXXXXXXXWAKAAXXXXX 78
AD+LLW+ + V++ +T W +FE +G A+ +
Sbjct: 64 ADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNR 123
Query: 79 XXXXXXDLEISEETIARVADSLQIWLNRVLSLAHDIAIKRNLLLCL-QVVGALWVISYIG 137
+L +SEE + A S +I LN +L +AHD+ + + L QVV LW++S IG
Sbjct: 124 QLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSAIG 183
Query: 138 SLFNFLTLIYIGVLLSLSLPVLYDKYQDQINDKLYLVHGIYLTQYKTIHRVVLSKIPKFT 197
S + TL+YIG +LS+++P LY KYQ +++ +H YK + V+S++
Sbjct: 184 SYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSL 243
Query: 198 NKEK 201
+K+K
Sbjct: 244 SKDK 247
>AT3G54120.1 | Symbols: | Reticulon family protein |
chr3:20041269-20042133 REVERSE LENGTH=203
Length = 203
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 83/160 (51%)
Query: 8 SVHHALGAGSVADVLLWKNWRGGVTVLVSATALWYLFERAGYNXXXXXXXXXXXXXXXXX 67
++H LG G VADV+LW+ V ++ A W +FE Y
Sbjct: 14 TIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLLLLSILF 73
Query: 68 XWAKAAXXXXXXXXXXXDLEISEETIARVADSLQIWLNRVLSLAHDIAIKRNLLLCLQVV 127
W+K+A + +ISE + L+I +N++L ++HDIA+ R+ L +V
Sbjct: 74 LWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELYTKVA 133
Query: 128 GALWVISYIGSLFNFLTLIYIGVLLSLSLPVLYDKYQDQI 167
+L+++S IGSL +F TL + VL+ +++P Y++Y+D I
Sbjct: 134 VSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYI 173
>AT4G01230.1 | Symbols: | Reticulon family protein |
chr4:516264-517408 REVERSE LENGTH=242
Length = 242
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 5/187 (2%)
Query: 8 SVHHALGAGSVADVLLWKNWRGGVTVLVSATALWYLFERAGYNXXXXXXXXXXXXXXXXX 67
+H LG ADVLLW++ + + +L + T +W LF G
Sbjct: 60 PIHMVLGGA--ADVLLWRDKKVTLGLLSAVTVIWLLFGFGGRRLLTSLCRGSILFLLLSF 117
Query: 68 XWAKAAXXXXXXXXXXXDLEISEETIARVADSLQIWLNRVLSLAHDIAIKRNLLLCLQVV 127
W+ A D+ I E+ + + A ++ LN + IA++R++ + V
Sbjct: 118 LWSNA---LNKSPENMMDIYIPEKPLLQAASAMTFELNCAFATLRSIALERDIKNFVMAV 174
Query: 128 GALWVISYIGSLFNFLTLIYIGVLLSLSLPVLYDKYQDQINDKLYLVHGIYLTQYKTIHR 187
LW++S IG+ F+FL+L+YI +L ++P+LY+KY+D+I+ Y+
Sbjct: 175 IGLWLVSVIGNWFSFLSLLYICFVLIHTVPMLYEKYEDEIDPIAEKAVIEMKKHYQVFEA 234
Query: 188 VVLSKIP 194
LSKIP
Sbjct: 235 KFLSKIP 241
>AT2G23640.1 | Symbols: RTNLB13 | Reticulan like protein B13 |
chr2:10057554-10059042 FORWARD LENGTH=206
Length = 206
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 80/188 (42%), Gaps = 1/188 (0%)
Query: 18 VADVLLWKNWRGGVTVLVSATALWYLFERAGYNXXXXXXXXXXXXXXXXXXWAKAAXXXX 77
V D+ LW+ + + L+ +T+ W L G+ W
Sbjct: 16 VEDIYLWRRKKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLLS 75
Query: 78 XXXXXXXDLEISEETIARVADSLQIWLNRVLSLAHDIAIKRNLLLCLQVVGALWVISYIG 137
LE+SEE + S ++ + ++ + + + + V W++S IG
Sbjct: 76 KVEPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIG 135
Query: 138 SLFNFLTLIYIGVLLSLSLPVLYDKYQDQINDKLYLVHGIYLTQYKTIHRVVLSKIPKFT 197
+L +F T ++IG+++ L++P L+++Y DQI L + Y T H +L K
Sbjct: 136 NLLDFHTCLFIGLVMGLTVPKLWEEYGDQIQKHLGSLKDKSKGAYNTTHEKILEMKNKLH 195
Query: 198 N-KEKKVQ 204
+ E+KV+
Sbjct: 196 HGTEEKVK 203
>AT1G68230.2 | Symbols: | Reticulon family protein |
chr1:25572185-25572921 FORWARD LENGTH=162
Length = 162
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 9 VHHALGAGSVADVLLWKNWRGGVTVLVSATALWYLFERAGYNXXXXXXXXXXXXXXXXXX 68
++H LG G AD++ WKN + T+L T +W+LFE Y
Sbjct: 22 LYHNLGGGRFADIMFWKNKKESGTILGVFTLIWFLFEVVEYPFITFLCQILLLFIFIFLI 81
Query: 69 WA--KAAXXXXXXXXXXXDLEISEETIARVADSLQIWLNRVLSLAHDIAIKRNLLLCLQV 126
W+ ++ DL ISE + + + ++ ++ +DI+ ++ L
Sbjct: 82 WSYIGSSQLIQSKPPSINDLRISESNWRFLFNKINWFIIKL----YDISSGKDFRLLFLA 137
Query: 127 VGALWVISYIGSLFNFLTLIYIG 149
V +LW++S +G+ F+ LTL+YIG
Sbjct: 138 VVSLWILSVVGNYFSSLTLLYIG 160
>AT3G10915.1 | Symbols: | Reticulon family protein |
chr3:3416573-3417497 REVERSE LENGTH=162
Length = 162
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%)
Query: 6 RISVHHALGAGSVADVLLWKNWRGGVTVLVSATALWYLFERAGYNXXXXXXXXXXXXXXX 65
+I+VH +G G AD+LLW+ + V++ +T W +FE +G
Sbjct: 29 QITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMI 88
Query: 66 XXXWAKAAXXXXXXXXXXXDLEISEETIARVADSLQIWLNRVLSLAHDIAIKRNLLLCLQ 125
A+ + +L +SEE + A S +I LN +L +AHD+ + + L +
Sbjct: 89 SFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFK 148
Query: 126 VV 127
V+
Sbjct: 149 VM 150
>AT2G46170.2 | Symbols: | Reticulon family protein |
chr2:18965410-18966486 FORWARD LENGTH=187
Length = 187
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 48/113 (42%)
Query: 8 SVHHALGAGSVADVLLWKNWRGGVTVLVSATALWYLFERAGYNXXXXXXXXXXXXXXXXX 67
VH LG G ADV LW++ + VL ATA+W LFE Y+
Sbjct: 58 PVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLF 117
Query: 68 XWAKAAXXXXXXXXXXXDLEISEETIARVADSLQIWLNRVLSLAHDIAIKRNL 120
W+ A ++ + EE VA SL+ LN+ + IA+ R+L
Sbjct: 118 LWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDL 170