Miyakogusa Predicted Gene

Lj5g3v2113390.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2113390.1 Non Chatacterized Hit- tr|I3SCZ8|I3SCZ8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,97.62,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,UNC-50;
UNC-50,UNC-50,CUFF.56718.1
         (252 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G15240.1 | Symbols:  | UNC-50 family protein | chr2:6615980-6...   389   e-109

>AT2G15240.1 | Symbols:  | UNC-50 family protein |
           chr2:6615980-6618862 REVERSE LENGTH=252
          Length = 252

 Score =  389 bits (1000), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 196/252 (77%), Positives = 218/252 (86%)

Query: 1   MLPTASKGRASSSTSRPNSTLLPYLRRIIKWQQMDIEYTFWQMFHLCTAPKVVYQHTKYH 60
           MLPT S+ R+SSS+SR N   L Y RRI+KWQQMD+EYTFWQM +LCT+PKVVYQHTKYH
Sbjct: 1   MLPTTSRSRSSSSSSRANPMFLQYFRRIVKWQQMDVEYTFWQMLNLCTSPKVVYQHTKYH 60

Query: 61  KQTKNQWARDDPAFVVICSLLLAVATLAYCAAYDHSIAHAXXXXXXXXXXXXXXTGVFLA 120
           KQTKNQWARDDPAF+VICSLLL VAT+AYC  YDHS +HA              TG  +A
Sbjct: 61  KQTKNQWARDDPAFIVICSLLLVVATVAYCVTYDHSSSHAVVVVVSVLFTHFLITGAVIA 120

Query: 121 TFCWFLTNSYLREEAPNSYVVEQRVEWMYAFDVHCNSFFPMFVLLYVIHYFLSPLLVAHG 180
           T CWFLTNSYLREE PNS+VVEQRVEW+Y FDVHCNSFFPMFVLLYV+HYFLSPLL+AHG
Sbjct: 121 TCCWFLTNSYLREETPNSHVVEQRVEWLYTFDVHCNSFFPMFVLLYVVHYFLSPLLIAHG 180

Query: 181 FIPTLLSNILVMVGASYYHYLNFLGYDVLPFLERTTFFLYPIGVVIVLSPILILSGFNPS 240
           FIP LLSN+L MVGASYYHYLNFLGYDVLPFLERTTFFLYPIGVVIVLSPILILSGFNPS
Sbjct: 181 FIPLLLSNLLFMVGASYYHYLNFLGYDVLPFLERTTFFLYPIGVVIVLSPILILSGFNPS 240

Query: 241 RYFLSVYFSRQI 252
           RYF+++YFS+++
Sbjct: 241 RYFMNMYFSQRL 252