Miyakogusa Predicted Gene

Lj5g3v2112090.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2112090.1 Non Chatacterized Hit- tr|I3SBZ4|I3SBZ4_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,40.41,5e-19,seg,NULL; ZINC_FINGER_C2H2_1,Zinc finger, C2H2;
ZINC_FINGER_C2H2_2,Zinc finger, C2H2; ZFP1 (ARABIDOP,CUFF.56694.1
         (197 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G24625.1 | Symbols: ZFP7 | zinc finger protein 7 | chr1:87260...    84   6e-17
AT1G66140.1 | Symbols: ZFP4 | zinc finger protein 4 | chr1:24620...    84   7e-17
AT5G10970.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...    82   2e-16
AT1G80730.1 | Symbols: ZFP1, ATZFP1 | zinc-finger protein 1 | ch...    76   1e-14
AT5G25160.1 | Symbols: ZFP3 | zinc finger protein 3 | chr5:86875...    74   8e-14
AT5G14010.1 | Symbols: KNU | C2H2 and C2HC zinc fingers superfam...    64   8e-11
AT5G57520.1 | Symbols: ZFP2, ATZFP2 | zinc finger protein 2 | ch...    62   3e-10
AT5G01860.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...    59   3e-09
AT4G17810.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...    58   4e-09
AT5G27880.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...    55   4e-08
AT1G67030.1 | Symbols: ZFP6 | zinc finger protein 6 | chr1:25016...    54   9e-08
AT2G41940.1 | Symbols: ZFP8 | zinc finger protein 8 | chr2:17507...    52   2e-07
AT3G58070.1 | Symbols: GIS | C2H2 and C2HC zinc fingers superfam...    52   3e-07
AT5G48890.1 | Symbols:  | C2H2-like zinc finger protein | chr5:1...    51   4e-07
AT2G42410.1 | Symbols: ZFP11, ATZFP11 | zinc finger protein 11 |...    51   5e-07
AT5G06650.1 | Symbols: GIS2 | C2H2 and C2HC zinc fingers superfa...    51   6e-07
AT2G37740.1 | Symbols: ATZFP10, ZFP10 | zinc-finger protein 10 |...    50   9e-07
AT1G68360.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...    50   9e-07
AT5G05120.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...    49   3e-06
AT3G23130.1 | Symbols: SUP, FON1, FLO10 | C2H2 and C2HC zinc fin...    48   5e-06

>AT1G24625.1 | Symbols: ZFP7 | zinc finger protein 7 |
           chr1:8726009-8726638 REVERSE LENGTH=209
          Length = 209

 Score = 84.0 bits (206), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 50/113 (44%), Positives = 63/113 (55%), Gaps = 4/113 (3%)

Query: 68  KVFSCNFCRRKFFSSQALGGHQNAHKRERGAARRYQSQRTMALMGLPMNTPMLRTLGVQP 127
           +VFSCN+CRRKF+SSQALGGHQNAHKRER  A+R      M        T    +LG+Q 
Sbjct: 57  RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYTSSSLGMQA 116

Query: 128 HS--LVHKPCRGGTVVAPSFHEAYAAAGIGMPCTPFAAEDQTDLVWPGSFRMV 178
           HS  L H   +   +V+   H+ Y   G  +P      +  +D  WPGSFR V
Sbjct: 117 HSGLLHHTLSQPQPLVSRFHHQGY--FGNTVPLFFDYDDGGSDFFWPGSFRQV 167


>AT1G66140.1 | Symbols: ZFP4 | zinc finger protein 4 |
           chr1:24620063-24620845 REVERSE LENGTH=260
          Length = 260

 Score = 83.6 bits (205), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 72/149 (48%), Gaps = 43/149 (28%)

Query: 63  PPPTAKVFSCNFCRRKFFSSQALGGHQNAHKRERGAARRYQSQRTMALMG---------- 112
           P  + +VFSCN+C+RKF+SSQALGGHQNAHKRER  A+R      M L G          
Sbjct: 78  PSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAM---RMGLAGVFPGRGSSSN 134

Query: 113 ------------LPM------NTPMLRTLGVQPHSLVHKPCRG----GTVV--APSFHEA 148
                       LP+      N    RTLG++ HS  H          T++     F++ 
Sbjct: 135 YAAAATAAALSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPETLIRNIARFNQG 194

Query: 149 YAAAGIGMPCTPFAAE-DQTDLVWPGSFR 176
           Y        C PF  E D+ +++WPGSFR
Sbjct: 195 YFGN-----CIPFYVEDDEAEMLWPGSFR 218


>AT5G10970.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
           protein | chr5:3469268-3470086 FORWARD LENGTH=272
          Length = 272

 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 40/75 (53%), Positives = 49/75 (65%), Gaps = 8/75 (10%)

Query: 68  KVFSCNFCRRKFFSSQALGGHQNAHKRERGAARRYQSQRTMALMGLPMNTPML------- 120
           K+FSCN+C+R F+SSQALGGHQNAHKRER  A+R Q   + A  G P     +       
Sbjct: 102 KLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMASAAAFGHPYGFAPVPFHGQYS 161

Query: 121 -RTLGVQPHSLVHKP 134
            RTLG+Q HS+ HKP
Sbjct: 162 NRTLGIQAHSMSHKP 176


>AT1G80730.1 | Symbols: ZFP1, ATZFP1 | zinc-finger protein 1 |
           chr1:30339493-30340179 REVERSE LENGTH=228
          Length = 228

 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 22/89 (24%)

Query: 68  KVFSCNFCRRKFFSSQALGGHQNAHKRERGAARRYQS--------------------QRT 107
           +VFSCN+C+RKF+SSQALGGHQNAHKRER  A+R Q                      R 
Sbjct: 66  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRF 125

Query: 108 MALMGLPMNTPM--LRTLGVQPHSLVHKP 134
            ++  LP++  +    TLG+Q HS +HKP
Sbjct: 126 ASMASLPLHGSVNNRSTLGIQAHSTIHKP 154


>AT5G25160.1 | Symbols: ZFP3 | zinc finger protein 3 |
           chr5:8687524-8688231 FORWARD LENGTH=235
          Length = 235

 Score = 73.6 bits (179), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 39/76 (51%), Positives = 47/76 (61%), Gaps = 10/76 (13%)

Query: 68  KVFSCNFCRRKFFSSQALGGHQNAHKRERGAARRYQSQRTMA-LMGLPMNTPML------ 120
           K+FSCN+C+R F+SSQALGGHQNAHKRER  A+R Q     A   G P     L      
Sbjct: 59  KLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGFSPLPFHGQY 118

Query: 121 ---RTLGVQPHSLVHK 133
              R+LG+Q HS+ HK
Sbjct: 119 NNHRSLGIQAHSISHK 134


>AT5G14010.1 | Symbols: KNU | C2H2 and C2HC zinc fingers superfamily
           protein | chr5:4522260-4522745 FORWARD LENGTH=161
          Length = 161

 Score = 63.5 bits (153), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 26/38 (68%), Positives = 32/38 (84%)

Query: 64  PPTAKVFSCNFCRRKFFSSQALGGHQNAHKRERGAARR 101
           P + ++F C +C RKF++SQALGGHQNAHKRER AARR
Sbjct: 32  PASHRLFPCQYCPRKFYTSQALGGHQNAHKRERAAARR 69


>AT5G57520.1 | Symbols: ZFP2, ATZFP2 | zinc finger protein 2 |
           chr5:23296019-23296471 FORWARD LENGTH=150
          Length = 150

 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 25/34 (73%), Positives = 31/34 (91%)

Query: 68  KVFSCNFCRRKFFSSQALGGHQNAHKRERGAARR 101
           +VFSCN+C+RKF+SSQALGGHQNAHK ER  A++
Sbjct: 50  RVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKK 83


>AT5G01860.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
           protein | chr5:335630-336277 FORWARD LENGTH=215
          Length = 215

 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 23/35 (65%), Positives = 31/35 (88%)

Query: 67  AKVFSCNFCRRKFFSSQALGGHQNAHKRERGAARR 101
           A+VF+C FC+++F +SQALGGHQNAHK+ER  A+R
Sbjct: 64  ARVFACTFCKKEFSTSQALGGHQNAHKQERSLAKR 98


>AT4G17810.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
           protein | chr4:9906918-9907532 FORWARD LENGTH=204
          Length = 204

 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 5/59 (8%)

Query: 51  TEGDAESQSRPPPPPTAKVFSCNFCRRKFFSSQALGGHQNAHKRERGAARRYQSQRTMA 109
           T+G+    + PP     + ++CNFCRR+F S+QALGGH N H+R+R ++R +Q     A
Sbjct: 32  TKGNISGTTWPP-----RSYTCNFCRREFRSAQALGGHMNVHRRDRASSRAHQGSTVAA 85


>AT5G27880.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
           protein | chr5:9885908-9886744 FORWARD LENGTH=278
          Length = 278

 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 15/108 (13%)

Query: 63  PPPTAKVFSCNFCRRKFFSSQALGGHQNAHKRERGAARRYQSQRT----MALMGLPMNTP 118
           P  + K+++C+FC++ F +SQALGGHQNAHK+ER   ++ +        ++ +   ++ P
Sbjct: 73  PSKSNKIYTCHFCKKGFSTSQALGGHQNAHKQEREWDKKRKEMEAEYPGLSFLNPFLDKP 132

Query: 119 MLRTLGVQPHSLVHKPCRGGT------VVAPSFHEAYAAAGIGMPCTP 160
            +   G    +L ++   G T      ++ PSF+     AG+ M   P
Sbjct: 133 HILLGGYSQDALSNENHLGITLDPFKRLIYPSFN-----AGMNMAVVP 175


>AT1G67030.1 | Symbols: ZFP6 | zinc finger protein 6 |
           chr1:25016644-25017237 FORWARD LENGTH=197
          Length = 197

 Score = 53.5 bits (127), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 15/89 (16%)

Query: 54  DAESQSRPPPPPT-----AKVFSCNFCRRKFFSSQALGGHQNAHKRERGAARRYQSQRTM 108
             ++QS  P P +     ++ + C +C R+F +SQALGGHQNAHK+ER   +R Q    +
Sbjct: 20  SVQNQSSEPRPGSGSGSESRKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQ---ML 76

Query: 109 ALMGLPMN-------TPMLRTLGVQPHSL 130
           A  GLP +        P+L      PH L
Sbjct: 77  ATRGLPRHHNFHPHTNPLLSAFAPLPHLL 105


>AT2G41940.1 | Symbols: ZFP8 | zinc finger protein 8 |
           chr2:17507556-17508329 FORWARD LENGTH=257
          Length = 257

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/32 (68%), Positives = 26/32 (81%)

Query: 70  FSCNFCRRKFFSSQALGGHQNAHKRERGAARR 101
           F C++C R F +SQALGGHQNAHKRER  A+R
Sbjct: 95  FECHYCFRNFPTSQALGGHQNAHKRERQHAKR 126


>AT3G58070.1 | Symbols: GIS | C2H2 and C2HC zinc fingers superfamily
           protein | chr3:21506845-21507606 REVERSE LENGTH=253
          Length = 253

 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 22/32 (68%), Positives = 26/32 (81%)

Query: 70  FSCNFCRRKFFSSQALGGHQNAHKRERGAARR 101
           F C++C R F +SQALGGHQNAHKRER  A+R
Sbjct: 91  FECHYCFRNFPTSQALGGHQNAHKRERQLAKR 122


>AT5G48890.1 | Symbols:  | C2H2-like zinc finger protein |
          chr5:19820353-19820874 FORWARD LENGTH=173
          Length = 173

 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 21/30 (70%), Positives = 25/30 (83%)

Query: 66 TAKVFSCNFCRRKFFSSQALGGHQNAHKRE 95
          + ++F C FC RKF SSQALGGHQNAHK+E
Sbjct: 31 SLRIFPCLFCSRKFHSSQALGGHQNAHKKE 60


>AT2G42410.1 | Symbols: ZFP11, ATZFP11 | zinc finger protein 11 |
           chr2:17658150-17658794 FORWARD LENGTH=214
          Length = 214

 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 2/43 (4%)

Query: 62  PPPPTAKVFSCNFCRRKFFSSQALGGHQNAHKRERGAARRYQS 104
           P PP  K ++C+FCRR+F S+QALGGH N H+R+R   R+  S
Sbjct: 43  PWPP--KNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPS 83


>AT5G06650.1 | Symbols: GIS2 | C2H2 and C2HC zinc fingers
           superfamily protein | chr5:2043486-2044061 FORWARD
           LENGTH=191
          Length = 191

 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 27/35 (77%)

Query: 68  KVFSCNFCRRKFFSSQALGGHQNAHKRERGAARRY 102
           K F C++C R F +SQALGGHQNAHKRER   +R+
Sbjct: 53  KRFKCHYCFRNFPTSQALGGHQNAHKRERQQTKRF 87


>AT2G37740.1 | Symbols: ATZFP10, ZFP10 | zinc-finger protein 10 |
           chr2:15827706-15828620 REVERSE LENGTH=304
          Length = 304

 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 5/54 (9%)

Query: 52  EGDAESQSRPPPPPTAKVFSCNFCRRKFFSSQALGGHQNAHKRERGAARRYQSQ 105
           E DA     PP     + ++C+FCRR+F S+QALGGH N H+R+R   ++   Q
Sbjct: 26  EDDAAGSLWPP-----RSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQADDQ 74


>AT1G68360.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
           protein | chr1:25621678-25622412 REVERSE LENGTH=244
          Length = 244

 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 29/40 (72%)

Query: 68  KVFSCNFCRRKFFSSQALGGHQNAHKRERGAARRYQSQRT 107
           + + C +C R+F +SQALGGHQNAHK+ER   +R Q Q T
Sbjct: 71  RKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQAT 110


>AT5G05120.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
           protein | chr5:1511232-1511837 FORWARD LENGTH=201
          Length = 201

 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 17/33 (51%), Positives = 25/33 (75%)

Query: 69  VFSCNFCRRKFFSSQALGGHQNAHKRERGAARR 101
           ++ C +C RKF  +QALGGHQNAH++ER   ++
Sbjct: 26  IYKCKYCPRKFDKTQALGGHQNAHRKEREVEKQ 58


>AT3G23130.1 | Symbols: SUP, FON1, FLO10 | C2H2 and C2HC zinc
           fingers superfamily protein | chr3:8242504-8243118
           FORWARD LENGTH=204
          Length = 204

 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 27/36 (75%)

Query: 68  KVFSCNFCRRKFFSSQALGGHQNAHKRERGAARRYQ 103
           + ++C+FC+R+F S+QALGGH N H+R+R   R  Q
Sbjct: 45  RSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQ 80