Miyakogusa Predicted Gene
- Lj5g3v2112050.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2112050.1 Non Chatacterized Hit- tr|I1LEH2|I1LEH2_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,78.3,0,PPR,Pentatricopeptide repeat; PPR_2,Pentatricopeptide
repeat; no description,Tetratricopeptide-like ,CUFF.56692.1
(629 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 363 e-100
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 359 3e-99
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 358 9e-99
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 346 3e-95
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 340 2e-93
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 2e-90
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 330 2e-90
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 320 2e-87
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 317 1e-86
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 1e-85
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 8e-85
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 309 5e-84
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 309 5e-84
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 308 9e-84
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 305 5e-83
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 7e-83
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 303 2e-82
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 8e-82
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 3e-80
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 294 1e-79
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 4e-79
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 5e-79
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 5e-79
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 8e-79
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 291 1e-78
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 1e-78
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 1e-78
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 2e-78
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 289 4e-78
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 5e-78
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 288 9e-78
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 288 1e-77
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 1e-77
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 3e-77
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 4e-77
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 285 7e-77
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 284 2e-76
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 282 4e-76
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 281 9e-76
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 9e-76
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 281 1e-75
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 281 1e-75
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 3e-75
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 5e-75
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 1e-74
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 278 1e-74
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 2e-74
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 276 3e-74
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 6e-74
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 8e-74
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 1e-73
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 273 2e-73
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 273 4e-73
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 272 5e-73
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 272 5e-73
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 8e-73
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 4e-72
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 5e-72
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 268 1e-71
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 1e-71
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 2e-71
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 2e-71
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 3e-71
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 4e-71
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 6e-71
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 265 7e-71
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 7e-71
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 1e-70
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 263 3e-70
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 263 4e-70
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 6e-70
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 6e-70
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 261 1e-69
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 2e-69
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 259 4e-69
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 259 5e-69
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 259 5e-69
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 5e-69
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 5e-69
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 5e-69
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 9e-69
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 258 1e-68
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 1e-68
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 4e-68
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 4e-68
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 9e-68
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 2e-67
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 253 2e-67
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 252 5e-67
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 9e-67
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 251 1e-66
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 250 2e-66
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 2e-66
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 2e-66
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 3e-66
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 250 3e-66
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 3e-66
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 5e-66
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 1e-65
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 248 1e-65
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 2e-65
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 4e-65
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 246 4e-65
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 7e-65
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 9e-65
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 2e-64
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 243 3e-64
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 2e-63
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 2e-63
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 2e-63
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 3e-63
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 239 4e-63
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 5e-63
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 2e-62
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 5e-62
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 235 6e-62
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 7e-62
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 2e-61
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 2e-61
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 233 3e-61
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 7e-61
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 227 2e-59
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 3e-58
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 223 3e-58
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 223 3e-58
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 3e-58
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 223 4e-58
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 7e-58
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 1e-57
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 1e-57
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 2e-57
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 221 2e-57
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 6e-57
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 219 7e-57
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 1e-56
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 1e-56
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 3e-56
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 4e-56
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 2e-55
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 5e-55
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 6e-55
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 5e-54
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 209 6e-54
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 9e-53
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 204 1e-52
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 2e-52
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 202 4e-52
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 8e-52
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 2e-51
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 8e-51
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 1e-50
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 2e-50
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 3e-50
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 3e-50
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 6e-49
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 6e-49
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 2e-48
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 189 6e-48
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 2e-46
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 3e-44
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 176 5e-44
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 5e-43
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 7e-43
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 1e-40
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 7e-38
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 2e-22
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 6e-21
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 95 1e-19
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 4e-19
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 8e-19
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 92 9e-19
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 9e-19
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 9e-19
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 87 2e-17
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 87 5e-17
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 6e-17
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 86 8e-17
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 84 4e-16
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 82 1e-15
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 6e-15
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 80 6e-15
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 9e-14
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 2e-13
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 4e-13
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 5e-13
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 73 5e-13
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 6e-13
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 3e-12
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 70 4e-12
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 69 8e-12
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 69 1e-11
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 69 1e-11
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 68 2e-11
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 68 2e-11
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 4e-11
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 67 5e-11
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 6e-11
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 66 7e-11
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 9e-11
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 9e-11
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 9e-11
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 65 2e-10
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 9e-10
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 62 1e-09
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 2e-09
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 60 5e-09
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 57 5e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 56 7e-08
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 8e-08
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 55 2e-07
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-07
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 3e-06
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-05
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/581 (35%), Positives = 318/581 (54%), Gaps = 24/581 (4%)
Query: 45 SHLLQIHARIFQLGAHQD----NLLATRLIGHYPPRIALRVFHYLHNPNIFPFNAIIRVL 100
+HL QIH + H D NLL R + + + +F + PNIF +N++I
Sbjct: 27 NHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGF 86
Query: 101 AEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDP 160
LF ++ L + FTF +LK C R+ + +H+ + K G+ +D
Sbjct: 87 VNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDV 146
Query: 161 SVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMV 220
+ L+++Y+ G + A K+FDEIPDRS VT WT+L +GY SG E + LF MV
Sbjct: 147 AAMTSLLSIYS-GSGRLNDAHKLFDEIPDRSVVT-WTALFSGYTTSGRHREAIDLFKKMV 204
Query: 221 RQNLRPQNDTMVSVLSACSSL-EISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLF 279
++P + +V VLSAC + ++ E V ++ E+ S V T LV L+
Sbjct: 205 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNS-------FVRTTLVNLY 257
Query: 280 GKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNH 339
K G +EK+R FD + ++ +V W+ MI Y + P EG+ LF M++E +P+
Sbjct: 258 AKCGKMEKARSVFDSMV---EKDIVTWSTMIQGYASNSFPKEGIELFLQMLQE-NLKPDQ 313
Query: 340 VTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKE 399
++V LS+CA +G L LG+W IS+ + +N +A +LIDMY+KCG + R E
Sbjct: 314 FSIVGFLSSCASLGALDLGEWG----ISLIDRHEFLTNLFMANALIDMYAKCGAMARGFE 369
Query: 400 VFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGF 459
VF+ KD+V+ NA I GLA NG + + +F + + G+ P+ TFLG L C H+G
Sbjct: 370 VFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGL 429
Query: 460 LERGRQIFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALL 517
++ G + F +S ++ T+EHY C +DL R G +++A ++ MP +PN VWGALL
Sbjct: 430 IQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALL 489
Query: 518 GGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKK 577
GC L +LA+ V K L+ ++P ++G YV L+N + +W++ + +R M +KG+KK
Sbjct: 490 SGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKK 549
Query: 578 QPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMK 618
PG SWI ++G VHEFL SHP + IY L L M+
Sbjct: 550 IPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMR 590
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 359 bits (922), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 202/597 (33%), Positives = 341/597 (57%), Gaps = 23/597 (3%)
Query: 29 HTPTTFTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHY 84
H+ + + +L+ ++ L QIHAR+ LG L T+LI A +VF
Sbjct: 19 HSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDD 78
Query: 85 LHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCA 144
L P IFP+NAIIR + H ++++++ ++P+ FTF LLK C +
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 145 EQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFD--EIPDRSEVTCWTSLITG 202
VHA + ++G+ D V NGL+A+YA+ R + AR VF+ +P+R+ V+ WT++++
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAK-CRRLGSARTVFEGLPLPERTIVS-WTAIVSA 196
Query: 203 YAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTS 262
YAQ+G E L++F M + +++P +VSVL+A + L+ K R ++ + ++
Sbjct: 197 YAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH--ASVVKMGLE 254
Query: 263 NGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEG 322
S+NT ++ K G V ++ FD++ + ++ WNAMIS Y ++G E
Sbjct: 255 IEPDLLISLNT----MYAKCGQVATAKILFDKMKSPN---LILWNAMISGYAKNGYAREA 307
Query: 323 LSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILAT 382
+ +F M+ + RP+ +++ S +SACAQ+G L + ++EY+ ++ ++ +++
Sbjct: 308 IDMFHEMINK-DVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDV----FISS 362
Query: 383 SLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQP 442
+LIDM++KCG ++ A+ VF+ + +DVV+++AMI+G ++G +A+ L+ M G+ P
Sbjct: 363 ALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHP 422
Query: 443 NAGTFLGALSACSHSGFLERGRQIFRDMS-FSTSLTLEHYACYIDLLARVGCIEEAIEVV 501
N TFLG L AC+HSG + G F M+ + +HYAC IDLL R G +++A EV+
Sbjct: 423 NDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVI 482
Query: 502 TSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWN 561
MP +P VWGALL C H VEL + +++L +DP+++G YV L+N A+ R W+
Sbjct: 483 KCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWD 542
Query: 562 DVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMK 618
V+ +R+ M+EKG+ K G SW+ V G + F VG SHP+ E I + + +K
Sbjct: 543 RVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLK 599
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 358 bits (918), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 215/597 (36%), Positives = 334/597 (55%), Gaps = 52/597 (8%)
Query: 50 IHARIFQLGAHQDNLLATRLIG------HYPP-RIALRVFHYLHNPNIFPFNAIIRVLAE 102
IHA++ ++G H N ++LI H+ A+ VF + PN+ +N + R A
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111
Query: 103 QGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSV 162
L+ + L PN +TF F+LK C +SK + +Q+H H+ K+G D V
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 171
Query: 163 SNGLVAVYARG--------------FRNVVF----------------ARKVFDEIPDRSE 192
L+++Y + R+VV A+K+FDEIP + +
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK-D 230
Query: 193 VTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYF 252
V W ++I+GYA++G+ +E L+LF M++ N+RP TMV+V+SAC+ ++ R V+
Sbjct: 231 VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHL 290
Query: 253 LSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISA 312
IDD +G + + L+ L+ K G +E + F+R+ + V+ WN +I
Sbjct: 291 W---IDD---HGFGSNLKIVNALIDLYSKCGELETACGLFERLPY---KDVISWNTLIGG 341
Query: 313 YVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKG 372
Y E L LF+ M++ G T PN VTM+S+L ACA +G + +G+W+H Y I KG
Sbjct: 342 YTHMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAIDIGRWIHVY-IDKRLKG 399
Query: 373 NIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLF 432
++ L TSLIDMY+KCG ++ A +VF + K + +NAMI G A++G + + LF
Sbjct: 400 VTNASS-LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLF 458
Query: 433 YKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLT--LEHYACYIDLLAR 490
+M + G+QP+ TF+G LSACSHSG L+ GR IFR M+ +T LEHY C IDLL
Sbjct: 459 SRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGH 518
Query: 491 VGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVML 550
G +EA E++ M +P+ +W +LL C +H VEL + ++ L++++P + G YV+L
Sbjct: 519 SGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLL 578
Query: 551 ANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIY 607
+N AS +WN+V+ R + +KG+KK PG S I +D VVHEF++G HP+ IY
Sbjct: 579 SNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 635
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 160/331 (48%), Gaps = 15/331 (4%)
Query: 35 TNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPPR----IALRVFHYLHNPNI 90
T+L+ ++ L H ++F H+D + T LI Y R A ++F + ++
Sbjct: 173 TSLISMYVQNGRLEDAH-KVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231
Query: 91 FPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAH 150
+NA+I AE G+ LF D+ + P++ T ++ C +S QVH
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLW 291
Query: 151 IQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGE 210
I G+ ++ + N L+ +Y++ + A +F+ +P + +V W +LI GY +
Sbjct: 292 IDDHGFGSNLKIVNALIDLYSK-CGELETACGLFERLPYK-DVISWNTLIGGYTHMNLYK 349
Query: 211 EVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDS 270
E L LF M+R P + TM+S+L AC+ L I RW++ + D G + S
Sbjct: 350 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH----VYIDKRLKGVTNASS 405
Query: 271 VNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMV 330
+ T L+ ++ K G++E + + F+ I + + WNAMI + G LF M
Sbjct: 406 LRTSLIDMYAKCGDIEAAHQVFNSIL---HKSLSSWNAMIFGFAMHGRADASFDLFSRMR 462
Query: 331 KEGTTRPNHVTMVSVLSACAQIGDLSLGKWV 361
K G +P+ +T V +LSAC+ G L LG+ +
Sbjct: 463 KIG-IQPDDITFVGLLSACSHSGMLDLGRHI 492
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
Query: 338 NHVTMVSVLSACAQIGDLSLGKWVHEYLISIG-HKGNIGSNQILATSLIDMYSKCGRLDR 396
NH ++ S+L C + L + +H +I IG H N ++++ ++ + + L
Sbjct: 33 NHPSL-SLLHNCKTLQSLRI---IHAQMIKIGLHNTNYALSKLIEFCILSPHFE--GLPY 86
Query: 397 AKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSH 456
A VF+ +++++N M G A++ + AL+L+ M GL PN+ TF L +C+
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 457 SGFLERGRQIFRD-MSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGA 515
S + G+QI + L L + I + + G +E+A +V P + + + A
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR-DVVSYTA 205
Query: 516 LLGGCLLHSRVELAQEV 532
L+ G +E AQ++
Sbjct: 206 LIKGYASRGYIENAQKL 222
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 346 bits (888), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 200/629 (31%), Positives = 333/629 (52%), Gaps = 49/629 (7%)
Query: 36 NLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIG------HYPPRIALRVFHYLHNPN 89
+L++ + L Q H + + G D A++L A +VF + PN
Sbjct: 35 SLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPN 94
Query: 90 IFPFNAIIRVLAE-QGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVH 148
F +N +IR A V +++ + + PN +TF FL+K + +H
Sbjct: 95 SFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLH 154
Query: 149 AHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGH 208
K +D V+N L+ Y ++ A KVF I ++ +V W S+I G+ Q G
Sbjct: 155 GMAVKSAVGSDVFVANSLIHCYF-SCGDLDSACKVFTTIKEK-DVVSWNSMINGFVQKGS 212
Query: 209 GEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCH 268
++ L+LF M ++++ + TMV VLSAC+ + R + F ++ N + +
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKI------RNLEFGRQVCSYIEENRVNVN 266
Query: 269 DSVNTVLVYLFGKWGNVEKSRERFDR----------------------------ISAAGK 300
++ ++ ++ K G++E ++ FD +++ +
Sbjct: 267 LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQ 326
Query: 301 RGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKW 360
+ +V WNA+ISAY Q+G P E L +F + + + N +T+VS LSACAQ+G L LG+W
Sbjct: 327 KDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRW 386
Query: 361 VHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLA 420
+H Y+ K I N + ++LI MYSKCG L++++EVF +DV +++AMI GLA
Sbjct: 387 IHSYI----KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLA 442
Query: 421 VNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLE- 479
++G G +A+ +FYKM E ++PN TF ACSH+G ++ +F M + + E
Sbjct: 443 MHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEE 502
Query: 480 -HYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVE 538
HYAC +D+L R G +E+A++ + +MP P+ VWGALLG C +H+ + LA+ RL+E
Sbjct: 503 KHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLE 562
Query: 539 VDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYL 598
++P + G +V+L+N A +W +VS LR MR G+KK+PG S I +DG++HEFL G
Sbjct: 563 LEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDN 622
Query: 599 SHPQIEGIYLTLTGLAKHMKAPSHCQSVS 627
+HP E +Y L + + +K+ + +S
Sbjct: 623 AHPMSEKVYGKLHEVMEKLKSNGYEPEIS 651
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 340 bits (871), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 213/666 (31%), Positives = 336/666 (50%), Gaps = 83/666 (12%)
Query: 25 SIVDHTPTTFTNLLQGHIPRS----HLLQIHARIFQLGAHQDNLLATRLIGHYPPRIAL- 79
S D +P F LL I ++ +HA + + G + + RLI Y +L
Sbjct: 15 SFTDSSP--FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLE 72
Query: 80 ---RVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRV---------------- 120
+VF + NI+ +N+++ L + G + SLF + R
Sbjct: 73 DGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDR 132
Query: 121 ---------------LAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNG 165
N+++F+ +L C D QVH+ I K +L+D + +
Sbjct: 133 CEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSA 192
Query: 166 LVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLR 225
LV +Y++ NV A++VFDE+ DR+ V W SLIT + Q+G E L +F MM+ +
Sbjct: 193 LVDMYSK-CGNVNDAQRVFDEMGDRN-VVSWNSLITCFEQNGPAVEALDVFQMMLESRVE 250
Query: 226 PQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSV-NTVLVYLFGKWGN 284
P T+ SV+SAC+SL K+ + V+ N + +D + + V ++ K
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVH------GRVVKNDKLRNDIILSNAFVDMYAKCSR 304
Query: 285 VEKSRERFDRI----------------------------SAAGKRGVVPWNAMISAYVQD 316
++++R FD + + +R VV WNA+I+ Y Q+
Sbjct: 305 IKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQN 364
Query: 317 GCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGS 376
G E LSLF ++ +E P H + ++L ACA + +L LG H +++ G K G
Sbjct: 365 GENEEALSLFCLLKRESVC-PTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGE 423
Query: 377 NQ--ILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYK 434
+ SLIDMY KCG ++ VF + +D V +NAMI+G A NG G +AL LF +
Sbjct: 424 EDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFRE 483
Query: 435 MPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMS--FSTSLTLEHYACYIDLLARVG 492
M E G +P+ T +G LSAC H+GF+E GR F M+ F + +HY C +DLL R G
Sbjct: 484 MLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAG 543
Query: 493 CIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLAN 552
+EEA ++ MP +P++ +WG+LL C +H + L + V+++L+EV+P++SG YV+L+N
Sbjct: 544 FLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSN 603
Query: 553 ALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTG 612
A +W DV +R MR++G+ KQPG SWI + G H F+V SHP+ + I+ L
Sbjct: 604 MYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDI 663
Query: 613 LAKHMK 618
L M+
Sbjct: 664 LIAEMR 669
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 330 bits (845), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 196/572 (34%), Positives = 321/572 (56%), Gaps = 28/572 (4%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHYP----PRIALRVFHYLHNPNIFPFNAIIRVLAEQG 104
Q+HA+I + H+D +A +LI +A+RVF+ + PN+ N++IR A+
Sbjct: 37 QLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNS 96
Query: 105 HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSN 164
F +F++++ L ++FT+ FLLK C + +H HI+K+G +D V N
Sbjct: 97 QPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPN 156
Query: 165 GLVAVYAR-GFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQN 223
L+ Y+R G V A K+F+++ +R V+ W S++ G ++G + +LF M +++
Sbjct: 157 ALIDCYSRCGGLGVRDAMKLFEKMSERDTVS-WNSMLGGLVKAGELRDARRLFDEMPQRD 215
Query: 224 LRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWG 283
L N TM+ + C E+SK + L E + + + S +V + K G
Sbjct: 216 LISWN-TMLDGYARCR--EMSK----AFELFEKMPERNTVSWS-------TMVMGYSKAG 261
Query: 284 NVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMV 343
++E +R FD++ K VV W +I+ Y + G E L MV G + + ++
Sbjct: 262 DMEMARVMFDKMPLPAK-NVVTWTIIIAGYAEKGLLKEADRLVDQMVASGL-KFDAAAVI 319
Query: 344 SVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEH 403
S+L+AC + G LSLG +H SI + N+GSN + +L+DMY+KCG L +A +VF
Sbjct: 320 SILAACTESGLLSLGMRIH----SILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFND 375
Query: 404 AVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERG 463
KD+V +N M+ GL V+G G++A+ LF +M G++P+ TF+ L +C+H+G ++ G
Sbjct: 376 IPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEG 435
Query: 464 RQIFRDMSFSTSLT--LEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCL 521
F M L +EHY C +DLL RVG ++EAI+VV +MP +PN +WGALLG C
Sbjct: 436 IDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACR 495
Query: 522 LHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGS 581
+H+ V++A+EV LV++DP G Y +L+N A+ W V+ +R +M+ G++K G+
Sbjct: 496 MHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGA 555
Query: 582 SWISVDGVVHEFLVGYLSHPQIEGIYLTLTGL 613
S + ++ +HEF V SHP+ + IY L L
Sbjct: 556 SSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 330 bits (845), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 207/642 (32%), Positives = 335/642 (52%), Gaps = 56/642 (8%)
Query: 18 LPFRSSCSIVDHTPTTFTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPPR- 76
+ + S+ S V H P +LL+ HL QI A++ G D ++RLI
Sbjct: 42 INWNSTHSFVLHNP--LLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSE 99
Query: 77 -----IALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFND-LKHRVLA--PNDFTF 128
++++ + NPNIF +N IR +E + F L+ L+H P+ FT+
Sbjct: 100 SRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTY 159
Query: 129 SFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIP 188
L KVC + + + H+ K+ V N + ++A ++ ARKVFDE P
Sbjct: 160 PVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFA-SCGDMENARKVFDESP 218
Query: 189 DRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSL-EISKIE 247
R V+ W LI GY + G E+ + ++ +M + ++P + TM+ ++S+CS L ++++ +
Sbjct: 219 VRDLVS-WNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGK 277
Query: 248 RWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG-------- 299
+ ++ E NG + L+ +F K G++ ++R FD +
Sbjct: 278 EFYEYVKE-------NGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMI 330
Query: 300 --------------------KRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNH 339
++ VV WNAMI VQ + L+LF+ M + T+P+
Sbjct: 331 SGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEM-QTSNTKPDE 389
Query: 340 VTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKE 399
+TM+ LSAC+Q+G L +G W+H Y+ K ++ N L TSL+DMY+KCG + A
Sbjct: 390 ITMIHCLSACSQLGALDVGIWIHRYI----EKYSLSLNVALGTSLVDMYAKCGNISEALS 445
Query: 400 VFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGF 459
VF +++ + + A+I GLA++G+ A+ F +M + G+ P+ TF+G LSAC H G
Sbjct: 446 VFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGM 505
Query: 460 LERGRQIFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALL 517
++ GR F M F+ + L+HY+ +DLL R G +EEA ++ SMP + + VWGALL
Sbjct: 506 IQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALL 565
Query: 518 GGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKK 577
GC +H VEL ++ +K+L+E+DP+ SG YV+L W D R M E+G++K
Sbjct: 566 FGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEK 625
Query: 578 QPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMKA 619
PG S I V+G+V EF+V S P+ E IY L L +HM++
Sbjct: 626 IPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMRS 667
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 320 bits (820), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 205/604 (33%), Positives = 317/604 (52%), Gaps = 43/604 (7%)
Query: 41 HIPRSHLLQIHARIFQLGAHQDNLLATRLI-----GHYPPRIALRVFHYLHNPNIFPFNA 95
H+ + H L + + IF + +L +RL+ R A R+ L +I +++
Sbjct: 16 HLKQIHCLLLTSPIFYT---RRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDS 72
Query: 96 IIRVLAEQGHVSHVFSL--------FNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
+I GH S +L + ++ + P+ TF LLK F+ +D+ Q
Sbjct: 73 LI------GHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSN-PFQF 125
Query: 148 HAHIQKMGYLNDPSVSNGLVAVYAR-GFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQS 206
HAHI K G +DP V N L++ Y+ G + FA ++FD D+ VT WT++I G+ ++
Sbjct: 126 HAHIVKFGLDSDPFVRNSLISGYSSSGLFD--FASRLFDGAEDKDVVT-WTAMIDGFVRN 182
Query: 207 GHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGES 266
G E + F M + + T+VSVL A +E + R V+ L +
Sbjct: 183 GSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLY-----LETGRVK 237
Query: 267 CHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLF 326
C + + LV ++GK + +++ FD + + R VV W A+I+ YVQ C +G+ +F
Sbjct: 238 CDVFIGSSLVDMYGKCSCYDDAQKVFDEMPS---RNVVTWTALIAGYVQSRCFDKGMLVF 294
Query: 327 RIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLID 386
M+K PN T+ SVLSACA +G L G+ VH Y+I K +I N T+LID
Sbjct: 295 EEMLKSDVA-PNEKTLSSVLSACAHVGALHRGRRVHCYMI----KNSIEINTTAGTTLID 349
Query: 387 MYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGT 446
+Y KCG L+ A VFE K+V + AMI G A +G DA LFY M + PN T
Sbjct: 350 LYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVT 409
Query: 447 FLGALSACSHSGFLERGRQIFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSM 504
F+ LSAC+H G +E GR++F M F+ +HYAC +DL R G +EEA ++ M
Sbjct: 410 FMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERM 469
Query: 505 PFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVS 564
P +P N VWGAL G CLLH EL + + R++++ P+ SG Y +LAN + + W++V+
Sbjct: 470 PMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVA 529
Query: 565 ALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHP-QIEGIYLTLTGLAKHMKAPSHC 623
+R +M+++ + K PG SWI V G + EF+ P + + +Y TL + M+ P
Sbjct: 530 RVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMRLPDEL 589
Query: 624 QSVS 627
+ V+
Sbjct: 590 EDVT 593
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 180/379 (47%), Gaps = 26/379 (6%)
Query: 33 TFTNLLQG--HIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPPR----IALRVFHYLH 86
TF LL+ + S+ Q HA I + G D + LI Y A R+F
Sbjct: 106 TFPPLLKAVFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAE 165
Query: 87 NPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQ 146
+ ++ + A+I G S F ++K +A N+ T +LK + +D R
Sbjct: 166 DKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRS 225
Query: 147 VHAHIQKMGYLN-DPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQ 205
VH + G + D + + LV +Y + A+KVFDE+P R+ VT WT+LI GY Q
Sbjct: 226 VHGLYLETGRVKCDVFIGSSLVDMYGKC-SCYDDAQKVFDEMPSRNVVT-WTALIAGYVQ 283
Query: 206 SGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWV--YFLSELIDDSTSN 263
S ++ + +F M++ ++ P T+ SVLSAC+ + R V Y + I+ +T+
Sbjct: 284 SRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTA 343
Query: 264 GESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGL 323
G T L+ L+ K G +E++ F+R+ ++ V W AMI+ + G +
Sbjct: 344 G--------TTLIDLYVKCGCLEEAILVFERLH---EKNVYTWTAMINGFAAHGYARDAF 392
Query: 324 SLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATS 383
LF M+ + PN VT ++VLSACA G + G+ +S+ + N+
Sbjct: 393 DLFYTMLSSHVS-PNEVTFMAVLSACAHGGLVEEGR---RLFLSMKGRFNMEPKADHYAC 448
Query: 384 LIDMYSKCGRLDRAKEVFE 402
++D++ + G L+ AK + E
Sbjct: 449 MVDLFGRKGLLEEAKALIE 467
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 191/579 (32%), Positives = 320/579 (55%), Gaps = 42/579 (7%)
Query: 67 TRLIGHYPPRIALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDF 126
+RL GH A ++F + P++ +N +I+ ++ L+ ++ + P+
Sbjct: 78 SRLGGHVS--YAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSH 135
Query: 127 TFSFLLKVCFRSKDA-RCAEQVHAHIQKMGYLNDPSVSNGLVAVYAR-GFRNVVFARKVF 184
TF FLL R A C +++H H+ K G ++ V N LV +Y+ G ++ AR VF
Sbjct: 136 TFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDM--ARGVF 193
Query: 185 DEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEIS 244
D + +V W +I+GY + EE ++L M R + P + T++ VLSACS ++
Sbjct: 194 DRRC-KEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDK 252
Query: 245 KIERWVY-FLSE------------LIDDSTSNGE-----------SCHDSVN-TVLVYLF 279
+ + V+ ++SE L++ + GE D ++ T +V +
Sbjct: 253 DLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGY 312
Query: 280 GKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNH 339
+ GN++ +R FD++ R + W MI Y++ GC E L +FR M G P+
Sbjct: 313 VERGNLKLARTYFDQMPV---RDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMI-PDE 368
Query: 340 VTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKE 399
TMVSVL+ACA +G L +G+W+ Y+ K I ++ ++ +LIDMY KCG ++A++
Sbjct: 369 FTMVSVLTACAHLGSLEIGEWIKTYI----DKNKIKNDVVVGNALIDMYFKCGCSEKAQK 424
Query: 400 VFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGF 459
VF +D + AM++GLA NG+G++A+++F++M + +QP+ T+LG LSAC+HSG
Sbjct: 425 VFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGM 484
Query: 460 LERGRQIFRDMSFSTSL--TLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALL 517
+++ R+ F M + +L HY C +D+L R G ++EA E++ MP PN+ VWGALL
Sbjct: 485 VDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALL 544
Query: 518 GGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKK 577
G LH+ +A+ +K+++E++P + Y +L N A ++W D+ +R ++ + IKK
Sbjct: 545 GASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKK 604
Query: 578 QPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKH 616
PG S I V+G HEF+ G SH Q E IY+ L LA+
Sbjct: 605 TPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQE 643
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 196/579 (33%), Positives = 300/579 (51%), Gaps = 57/579 (9%)
Query: 47 LLQIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAE 102
L +H+RI ++ L +L+ Y A +VF + N+ N +IR
Sbjct: 58 LRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVN 117
Query: 103 QGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSV 162
G +F + + P+ +TF +LK C S ++H K+G + V
Sbjct: 118 NGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFV 177
Query: 163 SNGLVAVYAR-GFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVR 221
NGLV++Y + GF + AR V DE+ R +V W SL+ GYAQ+ ++ L++ M
Sbjct: 178 GNGLVSMYGKCGF--LSEARLVLDEMS-RRDVVSWNSLVVGYAQNQRFDDALEVCREMES 234
Query: 222 QNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGK 281
+ TM S+L A S ++T+
Sbjct: 235 VKISHDAGTMASLLPAVS-------------------NTTTE------------------ 257
Query: 282 WGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVT 341
NV ++ F ++ GK+ +V WN MI Y+++ PVE + L+ M +G P+ V+
Sbjct: 258 --NVMYVKDMFFKM---GKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGF-EPDAVS 311
Query: 342 MVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVF 401
+ SVL AC LSLGK +H Y+ + + N +L +LIDMY+KCG L++A++VF
Sbjct: 312 ITSVLPACGDTSALSLGKKIHGYI----ERKKLIPNLLLENALIDMYAKCGCLEKARDVF 367
Query: 402 EHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLE 461
E+ S+DVV + AMI +G G DA+ LF K+ + GL P++ F+ L+ACSH+G LE
Sbjct: 368 ENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLE 427
Query: 462 RGRQIFRDMSFSTSLT--LEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGG 519
GR F+ M+ +T LEH AC +DLL R G ++EA + M +PN VWGALLG
Sbjct: 428 EGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGA 487
Query: 520 CLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQP 579
C +HS ++ + +L ++ P SG YV+L+N A +W +V+ +R M+ KG+KK P
Sbjct: 488 CRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNP 547
Query: 580 GSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMK 618
G+S + V+ ++H FLVG SHPQ + IY L L K MK
Sbjct: 548 GASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMK 586
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 311 bits (797), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 187/584 (32%), Positives = 295/584 (50%), Gaps = 54/584 (9%)
Query: 82 FHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDA 141
F L +P + + ++IR +Q S + F +++ P+ F +LK C D
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 142 RCAEQVHAHIQKMGYLNDPSVSNGLVAVYAR--GFRNVVFARKVFDEIPDRS-------- 191
R E VH I ++G D N L+ +YA+ G + + VFDE+P R+
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 192 ------------------------EVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQ 227
+V + ++I GYAQSG E+ L++ M +L+P
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 228 NDTMVSVLSACSSLE--ISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNV 285
+ T+ SVL S I E Y + + ID G S LV ++ K +
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSS--------LVDMYAKSARI 293
Query: 286 EKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSV 345
E S F R+ R + WN++++ YVQ+G E L LFR MV +P V SV
Sbjct: 294 EDSERVFSRLYC---RDGISWNSLVAGYVQNGRYNEALRLFRQMVT-AKVKPGAVAFSSV 349
Query: 346 LSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAV 405
+ ACA + L LGK +H Y++ +G GSN +A++L+DMYSKCG + A+++F+
Sbjct: 350 IPACAHLATLHLGKQLHGYVL----RGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN 405
Query: 406 SKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQ 465
D V + A+IMG A++G G +A+ LF +M G++PN F+ L+ACSH G ++
Sbjct: 406 VLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWG 465
Query: 466 IFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLH 523
F M+ + + LEHYA DLL R G +EEA ++ M +P VW LL C +H
Sbjct: 466 YFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 525
Query: 524 SRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSW 583
+ELA++V++++ VD + G YV++ N AS+ +W +++ LRL MR+KG++K+P SW
Sbjct: 526 KNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSW 585
Query: 584 ISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMKAPSHCQSVS 627
I + H F+ G SHP ++ I L + + M+ + S
Sbjct: 586 IEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTS 629
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 153/320 (47%), Gaps = 19/320 (5%)
Query: 80 RVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSK 139
RVF + ++ +N II A+ G + ++ L P+ FT S +L +
Sbjct: 197 RVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYV 256
Query: 140 DARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSL 199
D +++H ++ + G +D + + LV +YA+ R + + +VF + R ++ W SL
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSAR-IEDSERVFSRLYCRDGIS-WNSL 314
Query: 200 ITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDD 259
+ GY Q+G E L+LF MV ++P SV+ AC+ L ++ +L
Sbjct: 315 VAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLAT------LHLGKQLHGY 368
Query: 260 STSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCP 319
G + + + LV ++ K GN++ +R+ FDR++ + V W A+I + G
Sbjct: 369 VLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDE---VSWTAIIMGHALHGHG 425
Query: 320 VEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQI 379
E +SLF M ++G +PN V V+VL+AC+ +G + + + G NQ
Sbjct: 426 HEAVSLFEEMKRQG-VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKV-----YGLNQE 479
Query: 380 LA--TSLIDMYSKCGRLDRA 397
L ++ D+ + G+L+ A
Sbjct: 480 LEHYAAVADLLGRAGKLEEA 499
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 309 bits (791), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 192/582 (32%), Positives = 298/582 (51%), Gaps = 45/582 (7%)
Query: 78 ALRVFHYLHNP-NIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCF 136
AL VF + +P FN +R L+ + ++H + F+F +LK
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 137 RSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCW 196
+ ++H K+ L DP V G + +YA R + +AR VFDE+ R VT W
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGR-INYARNVFDEMSHRDVVT-W 180
Query: 197 TSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVY----- 251
++I Y + G +E +LF M N+ P + +++SAC + R +Y
Sbjct: 181 NTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIE 240
Query: 252 --------FLSELIDDSTSNGESCHDS--------------VNTVLVYLFGKWGNVEKSR 289
L+ L+ + G C D V+T +V + K G ++ ++
Sbjct: 241 NDVRMDTHLLTALV--TMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQ 298
Query: 290 ERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSAC 349
FD+ K+ +V W MISAYV+ P E L +F M G +P+ V+M SV+SAC
Sbjct: 299 VIFDQTE---KKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGI-KPDVVSMFSVISAC 354
Query: 350 AQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDV 409
A +G L KWVH S H + S + +LI+MY+KCG LD ++VFE ++V
Sbjct: 355 ANLGILDKAKWVH----SCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNV 410
Query: 410 VLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRD 469
V +++MI L+++GE DAL LF +M + ++PN TF+G L CSHSG +E G++IF
Sbjct: 411 VSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFAS 470
Query: 470 MSFSTSLT--LEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVE 527
M+ ++T LEHY C +DL R + EA+EV+ SMP N +WG+L+ C +H +E
Sbjct: 471 MTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELE 530
Query: 528 LAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVD 587
L + +KR++E++P G V+++N A +++W DV +R M EK + K+ G S I +
Sbjct: 531 LGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQN 590
Query: 588 GVVHEFLVGYLSHPQIEGIYLTLTGLAKHMKAPSH---CQSV 626
G HEFL+G H Q IY L + +K + C SV
Sbjct: 591 GKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSV 632
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 309 bits (791), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 184/539 (34%), Positives = 295/539 (54%), Gaps = 35/539 (6%)
Query: 91 FPFNAIIRVLAEQGHVSHVFSLFNDL-KHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHA 149
F N++I+ E F+L+ DL K AP++FTF+ L K C S Q+H+
Sbjct: 43 FLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHS 102
Query: 150 HIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHG 209
I + G+ D VS G+V +YA+ F + AR FDE+P RSEV+ WT+LI+GY + G
Sbjct: 103 QIWRFGFCADMYVSTGVVDMYAK-FGKMGCARNAFDEMPHRSEVS-WTALISGYIRCGEL 160
Query: 210 EEVLQLFHMMVR-QNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCH 268
+ +LF M +++ N M + S +++ R L D+ T H
Sbjct: 161 DLASKLFDQMPHVKDVVIYNAMMDGFV---KSGDMTSARR-------LFDEMT------H 204
Query: 269 DSVN--TVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLF 326
+V T +++ + +++ +R+ FD A +R +V WN MI Y Q+ P EG+ LF
Sbjct: 205 KTVITWTTMIHGYCNIKDIDAARKLFD---AMPERNLVSWNTMIGGYCQNKQPQEGIRLF 261
Query: 327 RIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLID 386
+ M + P+ VT++SVL A + G LSLG+W H ++ + + + T+++D
Sbjct: 262 QEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFV----QRKKLDKKVKVCTAILD 317
Query: 387 MYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGT 446
MYSKCG +++AK +F+ K V +NAMI G A+NG AL LF M +P+ T
Sbjct: 318 MYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMM-IEEKPDEIT 376
Query: 447 FLGALSACSHSGFLERGRQIF---RDMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTS 503
L ++AC+H G +E GR+ F R+M + +EHY C +DLL R G ++EA +++T+
Sbjct: 377 MLAVITACNHGGLVEEGRKWFHVMREMGLNAK--IEHYGCMVDLLGRAGSLKEAEDLITN 434
Query: 504 MPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDV 563
MPF+PN + + L C + +E A+ + K+ VE++P + G YV+L N A+D++W+D
Sbjct: 435 MPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDF 494
Query: 564 SALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMKAPSH 622
++ MR+ KK+ G S I ++ +V EF+ G +HP I+L L L HM +
Sbjct: 495 GMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEKY 553
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 161/365 (44%), Gaps = 41/365 (11%)
Query: 179 FARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQN-LRPQNDTMVSVLSA 237
+ARK+FD+ P R + S+I Y ++ + L+ + ++ P N T ++ +
Sbjct: 28 YARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKS 87
Query: 238 CSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISA 297
CS + VY +L G V+T +V ++ K+G + +R FD +
Sbjct: 88 CS------LSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMP- 140
Query: 298 AGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSL 357
R V W A+IS Y++ G L L + + + V +++ + GD++
Sbjct: 141 --HRSEVSWTALISGYIRCG----ELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTS 194
Query: 358 GKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIM 417
+ + + + HK I T++I Y +D A+++F+ +++V +N MI
Sbjct: 195 ARRLFD---EMTHK-----TVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIG 246
Query: 418 GLAVNGEGEDALRLFYKM-PEFGLQPNAGTFLGALSACSHSGFLERG---------RQIF 467
G N + ++ +RLF +M L P+ T L L A S +G L G +++
Sbjct: 247 GYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLD 306
Query: 468 RDMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVE 527
+ + T++ +D+ ++ G IE+A + MP K W A++ G L+
Sbjct: 307 KKVKVCTAI--------LDMYSKCGEIEKAKRIFDEMPEK-QVASWNAMIHGYALNGNAR 357
Query: 528 LAQEV 532
A ++
Sbjct: 358 AALDL 362
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 308 bits (788), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 189/554 (34%), Positives = 308/554 (55%), Gaps = 42/554 (7%)
Query: 85 LHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCA 144
L P++ +N +++ LA+ + V +LF +L+ + L P++FT +LK R +
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 145 EQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYA 204
E+VH + K G D VSN L+ +YA + KVFDE+P R +V W LI+ Y
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYA-SLGKIEITHKVFDEMPQR-DVVSWNGLISSYV 123
Query: 205 QSGHGEEVLQLFHMMVRQ-NLRPQNDTMVSVLSACSSLEISKI-ERWVYFLSELIDDSTS 262
+G E+ + +F M ++ NL+ T+VS LSACS+L+ +I ER F+ + S
Sbjct: 124 GNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVR 183
Query: 263 NGES---------CHDSVNTV--------------LVYLFGKWGNVEKSRERFDRISAAG 299
G + C D V +V+ + G ++++R F+R
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPV-- 241
Query: 300 KRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGK 359
+ VV W AM++ YVQ E L LFR M G RP++ +VS+L+ CAQ G L GK
Sbjct: 242 -KDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGI-RPDNFVLVSLLTGCAQTGALEQGK 299
Query: 360 WVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGL 419
W+H Y+ ++ + ++++ T+L+DMY+KCG ++ A EVF +D + ++I GL
Sbjct: 300 WIHGYI----NENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGL 355
Query: 420 AVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMS--FSTSLT 477
A+NG AL L+Y+M G++ +A TF+ L+AC+H GF+ GR+IF M+ +
Sbjct: 356 AMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPK 415
Query: 478 LEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNF---VWGALLGGCLLHSRVELAQEVSK 534
EH +C IDLL R G ++EA E++ M + + V+ +LL + V++A+ V++
Sbjct: 416 SEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAE 475
Query: 535 RLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFL 594
+L +V+ + S + +LA+ AS +W DV+ +R +M++ GI+K PG S I +DGV HEF+
Sbjct: 476 KLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFI 535
Query: 595 VG--YLSHPQIEGI 606
VG LSHP+++ I
Sbjct: 536 VGDDLLSHPKMDEI 549
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 305 bits (782), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 186/567 (32%), Positives = 307/567 (54%), Gaps = 23/567 (4%)
Query: 34 FTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPPRIALRVFHYLHNPNIFPF 93
F LL+ I + L QI A++ + N L + + + +F PN + F
Sbjct: 40 FLFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSF 99
Query: 94 NAIIRVLAEQGHVSHV-FSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQ 152
N +IR L + SL+ +K L P+ FT++F+ C + ++ VH+ +
Sbjct: 100 NYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLF 159
Query: 153 KMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEV 212
K+G D +++ L+ +YA+ V +ARK+FDEI +R V+ W S+I+GY+++G+ ++
Sbjct: 160 KVGLERDVHINHSLIMMYAKC-GQVGYARKLFDEITERDTVS-WNSMISGYSEAGYAKDA 217
Query: 213 LQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVN 272
+ LF M + P T+VS+L ACS L + R L E+ + + +
Sbjct: 218 MDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGR---LLEEM---AITKKIGLSTFLG 271
Query: 273 TVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKE 332
+ L+ ++GK G+++ +R F+++ K+ V W AMI+ Y Q+G E LF M K
Sbjct: 272 SKLISMYGKCGDLDSARRVFNQMI---KKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKT 328
Query: 333 GTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCG 392
G + P+ T+ +VLSAC +G L LGK + + + + NI +AT L+DMY KCG
Sbjct: 329 GVS-PDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNI----YVATGLVDMYGKCG 383
Query: 393 RLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALS 452
R++ A VFE K+ +NAMI A G ++AL LF +M + P+ TF+G LS
Sbjct: 384 RVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLS 440
Query: 453 ACSHSGFLERGRQIFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNN 510
AC H+G + +G + F +MS F +EHY IDLL+R G ++EA E + P KP+
Sbjct: 441 ACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDE 500
Query: 511 FVWGALLGGCLLHSRVELAQEVSKRLVEV-DPTSSGGYVMLANALASDRQWNDVSALRLE 569
+ A+LG C V + ++ + L+E+ + ++G YV+ +N LA + W++ + +R
Sbjct: 501 IMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRAL 560
Query: 570 MREKGIKKQPGSSWISVDGVVHEFLVG 596
MR++G+ K PG SWI ++G + EFL G
Sbjct: 561 MRDRGVVKTPGCSWIEIEGELMEFLAG 587
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 305 bits (781), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 185/556 (33%), Positives = 299/556 (53%), Gaps = 29/556 (5%)
Query: 84 YLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARC 143
Y+ ++F +N++I LA G + F+ ++ L P +F +K C D
Sbjct: 35 YVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFS 94
Query: 144 AEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGY 203
+Q H GY +D VS+ L+ +Y+ + + ARKVFDEIP R+ V+ WTS+I GY
Sbjct: 95 GKQTHQQAFVFGYQSDIFVSSALIVMYSTCGK-LEDARKVFDEIPKRNIVS-WTSMIRGY 152
Query: 204 AQSGHGEEVLQLFH-MMVRQNLRPQNDTM-------VSVLSACSSLEISKIERWV--YFL 253
+G+ + + LF ++V +N +D M VSV+SACS + + + + +
Sbjct: 153 DLNGNALDAVSLFKDLLVDEN--DDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 254 SELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAY 313
D S G + D+ Y G G V +R+ FD+I + V +N+++S Y
Sbjct: 211 KRGFDRGVSVGNTLLDA------YAKGGEGGVAVARKIFDQIVDKDR---VSYNSIMSVY 261
Query: 314 VQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGN 373
Q G E +FR +VK N +T+ +VL A + G L +GK +H+ +I +G + +
Sbjct: 262 AQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDD 321
Query: 374 IGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFY 433
+ I+ TS+IDMY KCGR++ A++ F+ +K+V + AMI G ++G AL LF
Sbjct: 322 V----IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFP 377
Query: 434 KMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMS--FSTSLTLEHYACYIDLLARV 491
M + G++PN TF+ L+ACSH+G G + F M F LEHY C +DLL R
Sbjct: 378 AMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRA 437
Query: 492 GCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLA 551
G +++A +++ M KP++ +W +LL C +H VELA+ RL E+D ++ G Y++L+
Sbjct: 438 GFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLS 497
Query: 552 NALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLT 611
+ A +W DV +R+ M+ +G+ K PG S + ++G VH FL+G HPQ E IY L
Sbjct: 498 HIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLA 557
Query: 612 GLAKHMKAPSHCQSVS 627
L + + + + S
Sbjct: 558 ELNRKLLEAGYVSNTS 573
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 188/416 (45%), Gaps = 40/416 (9%)
Query: 17 LLPFRSSCSIVDHTPTTFTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPP- 75
L P RSS ++ ++ G Q H + F G D +++ LI Y
Sbjct: 72 LYPTRSSFPCAIKACSSLFDIFSGK-------QTHQQAFVFGYQSDIFVSSALIVMYSTC 124
Query: 76 ---RIALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTF---- 128
A +VF + NI + ++IR G+ SLF DL +D F
Sbjct: 125 GKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSM 184
Query: 129 --SFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFR-NVVFARKVFD 185
++ C R E +H+ + K G+ SV N L+ YA+G V ARK+FD
Sbjct: 185 GLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFD 244
Query: 186 EIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQND-TMVSVLSACSSLEIS 244
+I D+ V+ + S+++ YAQSG E ++F +V+ + N T+ +VL A S
Sbjct: 245 QIVDKDRVS-YNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGAL 303
Query: 245 KIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVV 304
+I + ++ D G V T ++ ++ K G VE +R+ FDR+ + V
Sbjct: 304 RIGKCIH------DQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK---NKNVR 354
Query: 305 PWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLG-KWVHE 363
W AMI+ Y G + L LF M+ G RPN++T VSVL+AC+ G G +W +
Sbjct: 355 SWTAMIAGYGMHGHAAKALELFPAMIDSG-VRPNYITFVSVLAACSHAGLHVEGWRWFN- 412
Query: 364 YLISIGHKGNIGSNQILA--TSLIDMYSKCGRLDRAKEVFEHAVSK-DVVLFNAMI 416
KG G L ++D+ + G L +A ++ + K D +++++++
Sbjct: 413 -----AMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLL 463
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 183/391 (46%), Gaps = 41/391 (10%)
Query: 183 VFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLE 242
+F+ D+++V W S+I A+SG E L F M + +L P + + ACSSL
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 243 ISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRG 302
++ + + G V++ L+ ++ G +E +R+ FD I KR
Sbjct: 91 D------IFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP---KRN 141
Query: 303 VVPWNAMISAYVQDGCPVEGLSLFR-IMVKEGTTRP----NHVTMVSVLSACAQIGDLSL 357
+V W +MI Y +G ++ +SLF+ ++V E + + +VSV+SAC+++ L
Sbjct: 142 IVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGL 201
Query: 358 GKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGR--LDRAKEVFEHAVSKDVVLFNAM 415
+ +H ++I G + + +L+D Y+K G + A+++F+ V KD V +N++
Sbjct: 202 TESIHSFVIKRGFDRGVS----VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSI 257
Query: 416 IMGLAVNGEGEDALRLFYKMPEFGLQP-NAGTFLGALSACSHSGFLERGR----QIFR-- 468
+ A +G +A +F ++ + + NA T L A SHSG L G+ Q+ R
Sbjct: 258 MSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMG 317
Query: 469 ---DMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSR 525
D+ TS+ ID+ + G +E A + M K N W A++ G +H
Sbjct: 318 LEDDVIVGTSI--------IDMYCKCGRVETARKAFDRMKNK-NVRSWTAMIAGYGMHGH 368
Query: 526 VELAQEVSKRLVEVDPTSSGGYVMLANALAS 556
A E+ + +D Y+ + LA+
Sbjct: 369 AAKALELFPAM--IDSGVRPNYITFVSVLAA 397
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 303 bits (776), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 185/563 (32%), Positives = 284/563 (50%), Gaps = 65/563 (11%)
Query: 25 SIVDHTPTTFTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPPRIALRVFHY 84
S+ TP + + + + Q HA + + G D A++L+ + Y
Sbjct: 33 SVCSSTPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSY 92
Query: 85 LHN-------PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
H+ PN F N++IR A ++F ++ + P+ ++F+F+LK C
Sbjct: 93 AHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAA 152
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYAR-GFRNVVFARKVFDEIPDRSEVTCW 196
Q+H K G + D V N LV VY R G+ + ARKV D +P R V+ W
Sbjct: 153 FCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEI--ARKVLDRMPVRDAVS-W 209
Query: 197 TSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSEL 256
SL++ Y + G +E LF M +N +E W + +S
Sbjct: 210 NSLLSAYLEKGLVDEARALFDEMEERN----------------------VESWNFMISG- 246
Query: 257 IDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQD 316
+ G V++++E FD + R VV WNAM++AY
Sbjct: 247 ----------------------YAAAGLVKEAKEVFDSMPV---RDVVSWNAMVTAYAHV 281
Query: 317 GCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGS 376
GC E L +F M+ + T +P+ T+VSVLSACA +G LS G+WVH Y+ K I
Sbjct: 282 GCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYI----DKHGIEI 337
Query: 377 NQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMP 436
LAT+L+DMYSKCG++D+A EVF +DV +N++I L+V+G G+DAL +F +M
Sbjct: 338 EGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMV 397
Query: 437 EFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMS--FSTSLTLEHYACYIDLLARVGCI 494
G +PN TF+G LSAC+H G L++ R++F MS + T+EHY C +DLL R+G I
Sbjct: 398 YEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKI 457
Query: 495 EEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANAL 554
EEA E+V +P + + +LLG C ++E A+ ++ RL+E++ S GY ++N
Sbjct: 458 EEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLY 517
Query: 555 ASDRQWNDVSALRLEMREKGIKK 577
ASD +W V R MR + + +
Sbjct: 518 ASDGRWEKVIDGRRNMRAERVNR 540
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 301 bits (771), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 178/541 (32%), Positives = 296/541 (54%), Gaps = 19/541 (3%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
A +VF + + +NA++ + GH FSLF +++ + P+ T L++
Sbjct: 106 AAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASF 165
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSE--VTC 195
K + E +HA ++G +V+N ++ Y + ++ A+ VF+ I DR + V
Sbjct: 166 EKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKC-GDLDSAKLVFEAI-DRGDRTVVS 223
Query: 196 WTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSE 255
W S+ Y+ G + L+ +M+R+ +P T +++ ++C + E R ++ S
Sbjct: 224 WNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIH--SH 281
Query: 256 LIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQ 315
I T +++NT + ++ K + +R FD +++ R V W MIS Y +
Sbjct: 282 AIHLGTDQD---IEAINT-FISMYSKSEDTCSARLLFDIMTS---RTCVSWTVMISGYAE 334
Query: 316 DGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIG 375
G E L+LF M+K G +P+ VT++S++S C + G L GKW+ G K +
Sbjct: 335 KGDMDEALALFHAMIKSGE-KPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRD-- 391
Query: 376 SNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKM 435
N ++ +LIDMYSKCG + A+++F++ K VV + MI G A+NG +AL+LF KM
Sbjct: 392 -NVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKM 450
Query: 436 PEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMS--FSTSLTLEHYACYIDLLARVGC 493
+ +PN TFL L AC+HSG LE+G + F M ++ S L+HY+C +DLL R G
Sbjct: 451 IDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGK 510
Query: 494 IEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANA 553
+EEA+E++ +M KP+ +WGALL C +H V++A++ ++ L ++P + YV +AN
Sbjct: 511 LEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANI 570
Query: 554 LASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGL 613
A+ W+ + +R M+++ IKK PG S I V+G H F VG H + E IY TL GL
Sbjct: 571 YAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGL 630
Query: 614 A 614
+
Sbjct: 631 S 631
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 219/458 (47%), Gaps = 33/458 (7%)
Query: 93 FNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQ 152
+N IR + LF ++K PN+FTF F+ K C R D C E VHAH+
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 153 KMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEV 212
K + +D V V ++ + +V +A KVF+ +P+R + T W ++++G+ QSGH ++
Sbjct: 80 KSPFWSDVFVGTATVDMFVKC-NSVDYAAKVFERMPER-DATTWNAMLSGFCQSGHTDKA 137
Query: 213 LQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVN 272
LF M + P + T+++++ + S E+ + L + G +V
Sbjct: 138 FSLFREMRLNEITPDSVTVMTLIQSAS------FEKSLKLLEAMHAVGIRLGVDVQVTVA 191
Query: 273 TVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKE 332
+ +GK G+++ ++ F+ I G R VV WN+M AY G + L+ +M++E
Sbjct: 192 NTWISTYGKCGDLDSAKLVFEAID-RGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLRE 250
Query: 333 GTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCG 392
+P+ T +++ ++C L+ G+ +H + I +G +I + + I MYSK
Sbjct: 251 -EFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEA----INTFISMYSKSE 305
Query: 393 RLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALS 452
A+ +F+ S+ V + MI G A G+ ++AL LF+ M + G +P+ T L +S
Sbjct: 306 DTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLIS 365
Query: 453 ACSHSGFLERGRQIFRDMSFSTSLTLEHYAC----------YIDLLARVGCIEEAIEVVT 502
C G LE G+ I + Y C ID+ ++ G I EA ++
Sbjct: 366 GCGKFGSLETGKWI--------DARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFD 417
Query: 503 SMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVD 540
+ P K W ++ G L+ A ++ +++++D
Sbjct: 418 NTPEK-TVVTWTTMIAGYALNGIFLEALKLFSKMIDLD 454
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 124/289 (42%), Gaps = 30/289 (10%)
Query: 187 IPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKI 246
I S V W I E L LF M R P N T V AC+ L
Sbjct: 11 ISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGC 70
Query: 247 ERWVY-------FLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG 299
V+ F S++ V T V +F K +V+ + + F+R+
Sbjct: 71 CEMVHAHLIKSPFWSDVF-------------VGTATVDMFVKCNSVDYAAKVFERMP--- 114
Query: 300 KRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGK 359
+R WNAM+S + Q G + SLFR M T P+ VT+++++ + + L L +
Sbjct: 115 ERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEIT-PDSVTVMTLIQSASFEKSLKLLE 173
Query: 360 WVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKD--VVLFNAMIM 417
+H I +G + +A + I Y KCG LD AK VFE D VV +N+M
Sbjct: 174 AMHAVGIRLG----VDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFK 229
Query: 418 GLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQI 466
+V GE DA L+ M +P+ TF+ ++C + L +GR I
Sbjct: 230 AYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLI 278
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 82/165 (49%), Gaps = 7/165 (4%)
Query: 291 RFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACA 350
R RIS G V WN I V PVE L LFR M K G PN+ T V ACA
Sbjct: 7 RLYRIS--GLSSVNAWNLQIREAVNRNDPVESLLLFREM-KRGGFEPNNFTFPFVAKACA 63
Query: 351 QIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVV 410
++ D+ + VH +LI K S+ + T+ +DM+ KC +D A +VFE +D
Sbjct: 64 RLADVGCCEMVHAHLI----KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDAT 119
Query: 411 LFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACS 455
+NAM+ G +G + A LF +M + P++ T + + + S
Sbjct: 120 TWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSAS 164
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 173/526 (32%), Positives = 283/526 (53%), Gaps = 20/526 (3%)
Query: 92 PFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHI 151
P+N +R LA Q S SL+ + +P+ F+F F+LK C +Q+H H+
Sbjct: 20 PWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 79
Query: 152 QKMGYLNDPSVSNGLVAVYAR-GFRNVVFARKVFDEIPDRSEVT-CWTSLITGYAQSGHG 209
K G +P V L+++Y + G V ARKVF+E P S+++ C+ +LI+GY +
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGL--VADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 210 EEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHD 269
+ +F M + + TM+ ++ C+ + +++ L G
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCT------VPEYLWLGRSLHGQCVKGGLDSEV 191
Query: 270 SVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIM 329
+V + ++ K G+VE R FD + +G++ WNA+IS Y Q+G + L L+ M
Sbjct: 192 AVLNSFITMYMKCGSVEAGRRLFDEMPV---KGLITWNAVISGYSQNGLAYDVLELYEQM 248
Query: 330 VKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYS 389
G P+ T+VSVLS+CA +G +G V + + S G N+ ++ + I MY+
Sbjct: 249 KSSGVC-PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNV----FVSNASISMYA 303
Query: 390 KCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLG 449
+CG L +A+ VF+ K +V + AMI ++G GE L LF M + G++P+ F+
Sbjct: 304 RCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVM 363
Query: 450 ALSACSHSGFLERGRQIFRDMSFSTSLTL--EHYACYIDLLARVGCIEEAIEVVTSMPFK 507
LSACSHSG ++G ++FR M L EHY+C +DLL R G ++EA+E + SMP +
Sbjct: 364 VLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVE 423
Query: 508 PNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALR 567
P+ VWGALLG C +H V++A+ +++E +P + G YV+++N + + + +R
Sbjct: 424 PDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIR 483
Query: 568 LEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGL 613
+ MRE+ +K+PG S++ G VH FL G SH Q E ++ L L
Sbjct: 484 VMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDEL 529
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 171/390 (43%), Gaps = 18/390 (4%)
Query: 194 TCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFL 253
T W + A E + L+ M+R P + +L +C+SL + +
Sbjct: 19 TPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQ----- 73
Query: 254 SELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAY 313
+L T G V T L+ ++ K G V +R+ F+ + + V +NA+IS Y
Sbjct: 74 -QLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVC-YNALISGY 131
Query: 314 VQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGN 373
+ + +FR M KE + VTM+ ++ C L LG+ +H + KG
Sbjct: 132 TANSKVTDAAYMFRRM-KETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCV----KGG 186
Query: 374 IGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFY 433
+ S + S I MY KCG ++ + +F+ K ++ +NA+I G + NG D L L+
Sbjct: 187 LDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYE 246
Query: 434 KMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFR---DMSFSTSLTLEHYACYIDLLAR 490
+M G+ P+ T + LS+C+H G + G ++ + F ++ + + + I + AR
Sbjct: 247 QMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNAS--ISMYAR 304
Query: 491 VGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVML 550
G + +A V MP K + W A++G +H E+ + +++ G ++
Sbjct: 305 CGNLAKARAVFDIMPVK-SLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVM 363
Query: 551 ANALASDRQWNDVSALRLEMREKGIKKQPG 580
+ S D ++ K +PG
Sbjct: 364 VLSACSHSGLTDKGLELFRAMKREYKLEPG 393
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 110/235 (46%), Gaps = 13/235 (5%)
Query: 80 RVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSK 139
R+F + + +NA+I ++ G V L+ +K + P+ FT +L C
Sbjct: 212 RLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLG 271
Query: 140 DARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSL 199
+ +V ++ G++ + VSN +++YAR N+ AR VFD +P +S V+ WT++
Sbjct: 272 AKKIGHEVGKLVESNGFVPNVFVSNASISMYAR-CGNLAKARAVFDIMPVKSLVS-WTAM 329
Query: 200 ITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSAC--SSLEISKIERWVYFLSELI 257
I Y G GE L LF M+++ +RP V VLSAC S L +E + E
Sbjct: 330 IGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYK 389
Query: 258 DDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISA 312
+ SC LV L G+ G ++++ E + + V W A++ A
Sbjct: 390 LEPGPEHYSC-------LVDLLGRAGRLDEAMEFIESMPVEPDGAV--WGALLGA 435
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 118/257 (45%), Gaps = 13/257 (5%)
Query: 292 FDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQ 351
F R SA PWN + E +SL+R M++ G++ P+ + +L +CA
Sbjct: 7 FVRNSAVAAVASTPWNVRLRELAYQSLFSESISLYRSMLRSGSS-PDAFSFPFILKSCAS 65
Query: 352 IGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEH--AVSKDV 409
+ G+ +H ++ KG + + T+LI MY KCG + A++VFE S+
Sbjct: 66 LSLPVSGQQLHCHVT----KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLS 121
Query: 410 VLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIF-R 468
V +NA+I G N + DA +F +M E G+ ++ T LG + C+ +L GR + +
Sbjct: 122 VCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQ 181
Query: 469 DMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGG----CLLHS 524
+ + +I + + G +E + MP K W A++ G L +
Sbjct: 182 CVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVK-GLITWNAVISGYSQNGLAYD 240
Query: 525 RVELAQEVSKRLVEVDP 541
+EL +++ V DP
Sbjct: 241 VLELYEQMKSSGVCPDP 257
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 181/551 (32%), Positives = 291/551 (52%), Gaps = 31/551 (5%)
Query: 85 LHNPNI-------FPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
L+NP+I N +I+ L ++G + + + +P+ T+ L+ C
Sbjct: 34 LNNPSISSGAGAKISNNQLIQSLCKEGKLKQAIRVLSQES----SPSQQTYELLILCCGH 89
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWT 197
A +VH HI G DP ++ L+ +Y+ +V +ARKVFD+ R+ + W
Sbjct: 90 RSSLSDALRVHRHILDNGSDQDPFLATKLIGMYS-DLGSVDYARKVFDKTRKRT-IYVWN 147
Query: 198 SLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFL---S 254
+L +GHGEEVL L+ M R + T VL AC + E + V L
Sbjct: 148 ALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT-----VNHLMKGK 202
Query: 255 ELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYV 314
E+ T G S H + T LV ++ ++G V+ + F + R VV W+AMI+ Y
Sbjct: 203 EIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPV---RNVVSWSAMIACYA 259
Query: 315 QDGCPVEGLSLFRIMVKEGT-TRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGN 373
++G E L FR M++E + PN VTMVSVL ACA + L GK +H Y++ G
Sbjct: 260 KNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRG---- 315
Query: 374 IGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFY 433
+ S + ++L+ MY +CG+L+ + VF+ +DVV +N++I V+G G+ A+++F
Sbjct: 316 LDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFE 375
Query: 434 KMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARV 491
+M G P TF+ L ACSH G +E G+++F M +EHYAC +DLL R
Sbjct: 376 EMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRA 435
Query: 492 GCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLA 551
++EA ++V M +P VWG+LLG C +H VELA+ S+RL ++P ++G YV+LA
Sbjct: 436 NRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLA 495
Query: 552 NALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLT 611
+ A + W++V ++ + +G++K PG W+ V ++ F+ +P +E I+ L
Sbjct: 496 DIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLV 555
Query: 612 GLAKHMKAPSH 622
LA+ MK +
Sbjct: 556 KLAEDMKEKGY 566
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/418 (30%), Positives = 206/418 (49%), Gaps = 33/418 (7%)
Query: 45 SHLLQIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVL 100
S L++H I G+ QD LAT+LIG Y A +VF I+ +NA+ R L
Sbjct: 94 SDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRAL 153
Query: 101 AEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSK----DARCAEQVHAHIQKMGY 156
GH V L+ + + + FT++++LK C S+ +++HAH+ + GY
Sbjct: 154 TLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGY 213
Query: 157 LNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLF 216
+ + LV +YAR F V +A VF +P R+ V W+++I YA++G E L+ F
Sbjct: 214 SSHVYIMTTLVDMYAR-FGCVDYASYVFGGMPVRN-VVSWSAMIACYAKNGKAFEALRTF 271
Query: 217 HMMVRQ--NLRPQNDTMVSVLSACSSLEISKIERWV--YFLSELIDDSTSNGESCHDSVN 272
M+R+ + P + TMVSVL AC+SL + + + Y L +D V
Sbjct: 272 REMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSIL--------PVI 323
Query: 273 TVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKE 332
+ LV ++G+ G +E + FDR+ R VV WN++IS+Y G + + +F M+
Sbjct: 324 SALVTMYGRCGKLEVGQRVFDRMH---DRDVVSWNSLISSYGVHGYGKKAIQIFEEMLAN 380
Query: 333 GTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCG 392
G + P VT VSVL AC+ G + GK + E ++ I ++D+ +
Sbjct: 381 GAS-PTPVTFVSVLGACSHEGLVEEGKRLFE---TMWRDHGIKPQIEHYACMVDLLGRAN 436
Query: 393 RLDR-AKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQP-NAGTFL 448
RLD AK V + ++ +++ ++G E A R ++ F L+P NAG ++
Sbjct: 437 RLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRL--FALEPKNAGNYV 492
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 293 bits (749), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 178/579 (30%), Positives = 312/579 (53%), Gaps = 25/579 (4%)
Query: 48 LQIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQ 103
+Q+H + G + + L+ Y A ++F + + +N +I +
Sbjct: 259 VQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQS 318
Query: 104 GHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVS 163
G + + F ++ + P+ TFS LL + ++ +Q+H +I + D ++
Sbjct: 319 GLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLT 378
Query: 164 NGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQN 223
+ L+ Y + R V A+ +F + + +V +T++I+GY +G + L++F +V+
Sbjct: 379 SALIDAYFKC-RGVSMAQNIFSQC-NSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVK 436
Query: 224 LRPQNDTMVSVLSACSSLEISKIERWVY-FLSELIDDSTSNGESCHDSVNTVLVYLFGKW 282
+ P T+VS+L L K+ R ++ F+ + D+ N + ++ ++ K
Sbjct: 437 ISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCN-------IGCAVIDMYAKC 489
Query: 283 GNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTM 342
G + + E F+R+S KR +V WN+MI+ Q P + +FR M G + V++
Sbjct: 490 GRMNLAYEIFERLS---KRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICY-DCVSI 545
Query: 343 VSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFE 402
+ LSACA + S GK +H ++I K ++ S+ ++LIDMY+KCG L A VF+
Sbjct: 546 SAALSACANLPSESFGKAIHGFMI----KHSLASDVYSESTLIDMYAKCGNLKAAMNVFK 601
Query: 403 HAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPE-FGLQPNAGTFLGALSACSHSGFLE 461
K++V +N++I +G+ +D+L LF++M E G++P+ TFL +S+C H G ++
Sbjct: 602 TMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVD 661
Query: 462 RGRQIFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGG 519
G + FR M+ + EHYAC +DL R G + EA E V SMPF P+ VWG LLG
Sbjct: 662 EGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGA 721
Query: 520 CLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQP 579
C LH VELA+ S +L+++DP++SG YV+++NA A+ R+W V+ +R M+E+ ++K P
Sbjct: 722 CRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIP 781
Query: 580 GSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMK 618
G SWI ++ H F+ G ++HP+ IY L L ++
Sbjct: 782 GYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELR 820
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 127/514 (24%), Positives = 232/514 (45%), Gaps = 28/514 (5%)
Query: 18 LPFRSSCSIVDHTPTTFTNLLQGHIPRSHLL----QIHARIFQLGAHQDNLLATRLIGHY 73
LP R+S ++ T +LL +LL Q+HA + D+ R++G Y
Sbjct: 21 LPLRNSSRFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMY 80
Query: 74 PPRIAL----RVFHYL--HNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFT 127
+ ++F+ L +I P+N+II G ++ + + + ++P+ T
Sbjct: 81 AMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVST 140
Query: 128 FSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEI 187
F L+K C K+ + + + + +G + V++ L+ Y + + K+FD +
Sbjct: 141 FPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLE-YGKIDVPSKLFDRV 199
Query: 188 PDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIE 247
+ V W ++ GYA+ G + V++ F +M + P T VLS C+S + +
Sbjct: 200 LQKDCVI-WNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLG 258
Query: 248 RWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWN 307
++ L + +G S+ L+ ++ K G + + + F +S A V WN
Sbjct: 259 VQLHGLVVV------SGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRA---DTVTWN 309
Query: 308 AMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLIS 367
MIS YVQ G E L+ F M+ G P+ +T S+L + ++ +L K +H Y++
Sbjct: 310 CMISGYVQSGLMEESLTFFYEMISSGVL-PDAITFSSLLPSVSKFENLEYCKQIHCYIM- 367
Query: 368 IGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGED 427
+ +I + L ++LID Y KC + A+ +F S DVV+F AMI G NG D
Sbjct: 368 ---RHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYID 424
Query: 428 ALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEHYAC-YID 486
+L +F + + + PN T + L L+ GR++ + + C ID
Sbjct: 425 SLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVID 484
Query: 487 LLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGC 520
+ A+ G + A E+ + K + W +++ C
Sbjct: 485 MYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRC 517
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 292 bits (748), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 159/453 (35%), Positives = 265/453 (58%), Gaps = 18/453 (3%)
Query: 179 FARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLF-HMMVRQNLRPQNDTMVSVLSA 237
+A KVF +I V W +LI GYA+ G+ L+ M V + P T ++ A
Sbjct: 71 YAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKA 130
Query: 238 CSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISA 297
+++ ++ ++ + +G V L++L+ G+V + + FD++
Sbjct: 131 VTTMADVRLGETIHSVV------IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMP- 183
Query: 298 AGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSL 357
++ +V WN++I+ + ++G P E L+L+ M +G +P+ T+VS+LSACA+IG L+L
Sbjct: 184 --EKDLVAWNSVINGFAENGKPEEALALYTEMNSKGI-KPDGFTIVSLLSACAKIGALTL 240
Query: 358 GKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIM 417
GK VH Y+I +G N+ S+ +L +D+Y++CGR++ AK +F+ V K+ V + ++I+
Sbjct: 241 GKRVHVYMIKVGLTRNLHSSNVL----LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIV 296
Query: 418 GLAVNGEGEDALRLFYKMPEF-GLQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFST 474
GLAVNG G++A+ LF M GL P TF+G L ACSH G ++ G + FR M +
Sbjct: 297 GLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKI 356
Query: 475 SLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSK 534
+EH+ C +DLLAR G +++A E + SMP +PN +W LLG C +H +LA+
Sbjct: 357 EPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARI 416
Query: 535 RLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFL 594
++++++P SG YV+L+N AS+++W+DV +R +M G+KK PG S + V VHEFL
Sbjct: 417 QILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFL 476
Query: 595 VGYLSHPQIEGIYLTLTGLAKHMKAPSHCQSVS 627
+G SHPQ + IY L + +++ + +S
Sbjct: 477 MGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQIS 509
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 214/438 (48%), Gaps = 29/438 (6%)
Query: 19 PFRSSCSIVDHTPTTFTNLLQ--GHIPRSHLLQIHARIFQLGAH-QDNLLATRLIGHY-- 73
PF + ++ NLLQ G + L QIHA + G D L LI +
Sbjct: 3 PFSETSVLLLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVS 62
Query: 74 ---PPRI--ALRVFHYLHNP-NIFPFNAIIRVLAEQGHVSHVFSLFNDLK-HRVLAPNDF 126
PP + A +VF + P N+F +N +IR AE G+ FSL+ +++ ++ P+
Sbjct: 63 LPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTH 122
Query: 127 TFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDE 186
T+ FL+K D R E +H+ + + G+ + V N L+ +YA +V A KVFD+
Sbjct: 123 TYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYA-NCGDVASAYKVFDK 181
Query: 187 IPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKI 246
+P++ ++ W S+I G+A++G EE L L+ M + ++P T+VS+LSAC+ + +
Sbjct: 182 MPEK-DLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTL 240
Query: 247 ERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPW 306
+ V+ +I + + H S VL+ L+ + G VE+++ FD + + V W
Sbjct: 241 GKRVHVY--MIKVGLT--RNLHSS--NVLLDLYARCGRVEEAKTLFDEMV---DKNSVSW 291
Query: 307 NAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLI 366
++I +G E + LF+ M P +T V +L AC+ G + G EY
Sbjct: 292 TSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEG---FEYFR 348
Query: 367 SIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEH-AVSKDVVLFNAMIMGLAVNGEG 425
+ + I ++D+ ++ G++ +A E + + +VV++ ++ V+G+
Sbjct: 349 RMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDS 408
Query: 426 EDALRLFYKMPEFGLQPN 443
+ L F ++ L+PN
Sbjct: 409 D--LAEFARIQILQLEPN 424
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 129/267 (48%), Gaps = 21/267 (7%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
A +VF + ++ +N++I AE G +L+ ++ + + P+ FT LL C +
Sbjct: 175 AYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAK 234
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWT 197
++VH ++ K+G + SN L+ +YAR R V A+ +FDE+ D++ V+ WT
Sbjct: 235 IGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGR-VEEAKTLFDEMVDKNSVS-WT 292
Query: 198 SLITGYAQSGHGEEVLQLF-HMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSEL 256
SLI G A +G G+E ++LF +M + L P T V +L ACS + K E + YF +
Sbjct: 293 SLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVK-EGFEYF-RRM 350
Query: 257 IDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQD 316
++ H +V L + G V+K+ E S + VV W ++ A
Sbjct: 351 REEYKIEPRIEHFG---CMVDLLARAGQVKKAYEYIK--SMPMQPNVVIWRTLLGA---- 401
Query: 317 GCPVEGLS----LFRIMVKEGTTRPNH 339
C V G S RI + + PNH
Sbjct: 402 -CTVHGDSDLAEFARIQILQ--LEPNH 425
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 292 bits (747), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 179/550 (32%), Positives = 287/550 (52%), Gaps = 29/550 (5%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLA----PNDFTFSFLLK 133
ALR+F L P+I +++++ + G F + V+A P+ T L+
Sbjct: 115 ALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFF---RRMVMASDVTPDRVTLITLVS 171
Query: 134 VCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYA--RGFRNVVFARKVFDEIPDRS 191
C + ++R VH + + G+ ND S+ N L+ YA R F+ V +F I ++
Sbjct: 172 ACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAV---NLFKMIAEK- 227
Query: 192 EVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVY 251
+V W+++I Y Q+G E L +F+ M+ P T++ VL AC++ + R +
Sbjct: 228 DVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTH 287
Query: 252 FLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMIS 311
L+ G V+T LV ++ K + E++ F RI ++ VV W A+IS
Sbjct: 288 ELA------IRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP---RKDVVSWVALIS 338
Query: 312 AYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHK 371
+ +G + F IM+ E TRP+ + MV VL +C+++G L K H Y+I G
Sbjct: 339 GFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYG-- 396
Query: 372 GNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRL 431
SN + SL+++YS+CG L A +VF KD V++ ++I G ++G+G AL
Sbjct: 397 --FDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALET 454
Query: 432 FYKMPEFG-LQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDLL 488
F M + ++PN TFL LSACSH+G + G +IF+ M + + LEHYA +DLL
Sbjct: 455 FNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLL 514
Query: 489 ARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYV 548
RVG ++ AIE+ MPF P + G LLG C +H E+A+ V+K+L E++ +G Y+
Sbjct: 515 GRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYM 574
Query: 549 MLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYL 608
+++N +W +V LR ++++GIKK S I + VH F+ HP+ E +Y
Sbjct: 575 LMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYG 634
Query: 609 TLTGLAKHMK 618
L L HMK
Sbjct: 635 LLKELDLHMK 644
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 231/473 (48%), Gaps = 26/473 (5%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
A ++F + +++ +N +++ L+ + V F+ + P++FT LK C
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 138 SKDARCAEQVHAHIQKMGYL-NDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCW 196
++ E +H ++K L +D V + L+ +Y + R ++ A ++FDE+ ++ ++ W
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGR-MIEALRMFDEL-EKPDIVTW 130
Query: 197 TSLITGYAQSGHGEEVLQLFHMMV-RQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSE 255
+S+++G+ ++G + ++ F MV ++ P T+++++SAC+ L S++ R V+
Sbjct: 131 SSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGF-- 188
Query: 256 LIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQ 315
+I SN S +S L + +E + ++ V+ W+ +I+ YVQ
Sbjct: 189 VIRRGFSNDLSLVNS-------LLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQ 241
Query: 316 DGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIG 375
+G E L +F M+ +G T PN T++ VL ACA DL G+ HE I G + +
Sbjct: 242 NGAAAEALLVFNDMMDDG-TEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVK 300
Query: 376 SNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKM 435
++T+L+DMY KC + A VF KDVV + A+I G +NG ++ F M
Sbjct: 301 ----VSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIM 356
Query: 436 -PEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEHY--ACYIDLLARVG 492
E +P+A + L +CS GFLE+ + F + A ++L +R G
Sbjct: 357 LLENNTRPDAILMVKVLGSCSELGFLEQAK-CFHSYVIKYGFDSNPFIGASLVELYSRCG 415
Query: 493 CIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLV---EVDPT 542
+ A +V + K + VW +L+ G +H + A E +V EV P
Sbjct: 416 SLGNASKVFNGIALK-DTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPN 467
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 107/226 (47%), Gaps = 17/226 (7%)
Query: 281 KWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHV 340
K+ + +R+ F ++ KR + WN ++ + ++ E L F M ++ +P++
Sbjct: 6 KFSSSVDARQMFGEMT---KRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRD-EEKPDNF 61
Query: 341 TMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEV 400
T+ L AC ++ +++ G+ +H + + +GS+ + +SLI MY KCGR+ A +
Sbjct: 62 TLPVALKACGELREVNYGEMIHGF---VKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRM 118
Query: 401 FEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMP-EFGLQPNAGTFLGALSAC----- 454
F+ D+V +++M+ G NG A+ F +M + P+ T + +SAC
Sbjct: 119 FDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSN 178
Query: 455 SHSGFLERGRQIFRDMSFSTSLTLEHYACYIDLLARVGCIEEAIEV 500
S G G I R S SL CY A+ +EA+ +
Sbjct: 179 SRLGRCVHGFVIRRGFSNDLSLVNSLLNCY----AKSRAFKEAVNL 220
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 291 bits (746), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 197/627 (31%), Positives = 317/627 (50%), Gaps = 36/627 (5%)
Query: 7 HFTQKFKHCYLLPFRSSCSIVDHTPTTFTNLLQG---HIPRSHLLQIHARIFQLGAHQDN 63
HF + FK + SSC++ DH TFT LL G +P++ + Q+HA +LG +
Sbjct: 125 HFDEAFKLFRQMCRSSSCTLPDHV--TFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNP 182
Query: 64 LLATR--LIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLK 117
L L+ Y +A +F + + FN +I + G + LF ++
Sbjct: 183 FLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMR 242
Query: 118 HRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNV 177
P+DFTFS +LK D +Q+HA G+ D SV N ++ Y++ R V
Sbjct: 243 QSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDR-V 301
Query: 178 VFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSA 237
+ R +FDE+P+ V+ + +I+ Y+Q+ E L F M +N ++LS
Sbjct: 302 LETRMLFDEMPELDFVS-YNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSI 360
Query: 238 CSSLEISKIERWVYFLSELIDDSTSNGESCHDS---VNTVLVYLFGKWGNVEKSRERFDR 294
++L ++ R ++ + L + DS V LV ++ K E++ F
Sbjct: 361 AANLSSLQMGRQLHCQALL---------ATADSILHVGNSLVDMYAKCEMFEEAELIFKS 411
Query: 295 ISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGD 354
+ +R V W A+IS YVQ G GL LF M + R + T +VL A A
Sbjct: 412 LP---QRTTVSWTALISGYVQKGLHGAGLKLFTKM-RGSNLRADQSTFATVLKASASFAS 467
Query: 355 LSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNA 414
L LGK +H ++I G+ N+ S + L+DMY+KCG + A +VFE ++ V +NA
Sbjct: 468 LLLGKQLHAFIIRSGNLENVFS----GSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNA 523
Query: 415 MIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMS--F 472
+I A NG+GE A+ F KM E GLQP++ + LG L+ACSH GF+E+G + F+ MS +
Sbjct: 524 LISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIY 583
Query: 473 STSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEV 532
+ +HYAC +DLL R G EA +++ MPF+P+ +W ++L C +H LA+
Sbjct: 584 GITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERA 643
Query: 533 SKRLVEVDP-TSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVH 591
+++L ++ + YV ++N A+ +W V ++ MRE+GIKK P SW+ V+ +H
Sbjct: 644 AEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIH 703
Query: 592 EFLVGYLSHPQIEGIYLTLTGLAKHMK 618
F +HP + I + L ++
Sbjct: 704 VFSSNDQTHPNGDEIVRKINELTAEIE 730
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 167/350 (47%), Gaps = 23/350 (6%)
Query: 176 NVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQN--LRPQNDTMVS 233
+V AR +FD +PDR+ VT WT L+ YA++ H +E +LF M R + P + T +
Sbjct: 94 DVSSARDLFDAMPDRTVVT-WTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 234 VLSACS-SLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERF 292
+L C+ ++ + + + F +L D+ +V+ VL+ + + ++ + F
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNP-----FLTVSNVLLKSYCEVRRLDLACVLF 207
Query: 293 DRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQI 352
+ I ++ V +N +I+ Y +DG E + LF M + G +P+ T VL A +
Sbjct: 208 EEIP---EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSG-HQPSDFTFSGVLKAVVGL 263
Query: 353 GDLSLGKWVHEYLISIG--HKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVV 410
D +LG+ +H ++ G ++G NQIL D YSK R+ + +F+ D V
Sbjct: 264 HDFALGQQLHALSVTTGFSRDASVG-NQIL-----DFYSKHDRVLETRMLFDEMPELDFV 317
Query: 411 LFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM 470
+N +I + + E +L F +M G F LS ++ L+ GRQ+
Sbjct: 318 SYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQA 377
Query: 471 SFSTSLTLEHYA-CYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGG 519
+T+ ++ H +D+ A+ EEA + S+P + W AL+ G
Sbjct: 378 LLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP-QRTTVSWTALISG 426
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 174/527 (33%), Positives = 284/527 (53%), Gaps = 62/527 (11%)
Query: 142 RCAEQVHAHIQKMGYLNDPSVSNGLVAVYARG---FRNVVFARKVFDEIPDRSEVTCWTS 198
R Q+HA K G + D + ++ A R++ +A K+F+++P R+ + W +
Sbjct: 37 RDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFS-WNT 95
Query: 199 LITGYAQSGHGEEVLQL---FHMMVRQNLRPQNDTMVSVLSACSS--------------- 240
+I G+++S + ++ + + MM + + P T SVL AC+
Sbjct: 96 IIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLAL 155
Query: 241 --------LEISKIERW-----------VYFLSELI--------DDSTSNGESCHDSVNT 273
+S + R V F +I D +GE +
Sbjct: 156 KYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIV---LWN 212
Query: 274 VLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEG 333
V++ + + G+ + +R FD++ +R VV WN MIS Y +G + + +FR M K+G
Sbjct: 213 VMIDGYMRLGDCKAARMLFDKMR---QRSVVSWNTMISGYSLNGFFKDAVEVFREM-KKG 268
Query: 334 TTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGR 393
RPN+VT+VSVL A +++G L LG+W+H Y I + +L ++LIDMYSKCG
Sbjct: 269 DIRPNYVTLVSVLPAISRLGSLELGEWLHLY----AEDSGIRIDDVLGSALIDMYSKCGI 324
Query: 394 LDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSA 453
+++A VFE ++V+ ++AMI G A++G+ DA+ F KM + G++P+ ++ L+A
Sbjct: 325 IEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTA 384
Query: 454 CSHSGFLERGRQIFRDMSFSTSLT--LEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNF 511
CSH G +E GR+ F M L +EHY C +DLL R G ++EA E + +MP KP++
Sbjct: 385 CSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDV 444
Query: 512 VWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMR 571
+W ALLG C + VE+ + V+ L+++ P SG YV L+N AS W++VS +RL M+
Sbjct: 445 IWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMK 504
Query: 572 EKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMK 618
EK I+K PG S I +DGV+HEF+V SHP+ + I L ++ ++
Sbjct: 505 EKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLR 551
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 199/442 (45%), Gaps = 72/442 (16%)
Query: 47 LLQIHARIFQLGAHQDNLLATRLIG--------HYPPRIALRVFHYLHNPNIFPFNAIIR 98
L QIHA + G +D L A ++ H A ++F+ + N F +N IIR
Sbjct: 39 LSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIR 98
Query: 99 VLAEQGHVSHVFSL---FNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMG 155
+E + ++ + + + PN FTF +LK C ++ + +Q+H K G
Sbjct: 99 GFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYG 158
Query: 156 YLNDPSVSNGLVAVYAR-GF---------RNVV--------------------------- 178
+ D V + LV +Y GF +N++
Sbjct: 159 FGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGY 218
Query: 179 -------FARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTM 231
AR +FD++ RS V W ++I+GY+ +G ++ +++F M + ++RP T+
Sbjct: 219 MRLGDCKAARMLFDKMRQRS-VVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTL 277
Query: 232 VSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRER 291
VSVL A S L ++ W++ +E +G D + + L+ ++ K G +EK+
Sbjct: 278 VSVLPAISRLGSLELGEWLHLYAE------DSGIRIDDVLGSALIDMYSKCGIIEKAIHV 331
Query: 292 FDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQ 351
F+R+ + V+ W+AMI+ + G + + F M + G RP+ V +++L+AC+
Sbjct: 332 FERLP---RENVITWSAMINGFAIHGQAGDAIDCFCKMRQAG-VRPSDVAYINLLTACSH 387
Query: 352 IGDLSLGKWVHEYLISI-GHKGNIGSNQILATSLIDMYSKCGRLDRAKE-VFEHAVSKDV 409
G + G+ ++S+ G + I ++D+ + G LD A+E + + D
Sbjct: 388 GGLVEEGRRYFSQMVSVDGLEPRIEH----YGCMVDLLGRSGLLDEAEEFILNMPIKPDD 443
Query: 410 VLFNAMIMGLAVNGEGEDALRL 431
V++ A++ + G E R+
Sbjct: 444 VIWKALLGACRMQGNVEMGKRV 465
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 191/576 (33%), Positives = 296/576 (51%), Gaps = 20/576 (3%)
Query: 49 QIHARIFQLGAHQDNLLA-TRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQ 103
QIH + + G D+ A T L+ Y R A+ VF ++F +NA+I
Sbjct: 81 QIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVN 139
Query: 104 GHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVS 163
G + +++ + P+ +TF LLK + + ++VH K+G+ +D V
Sbjct: 140 GSPLDAMETYREMRANGILPDKYTFPSLLKGS-DAMELSDVKKVHGLAFKLGFDSDCYVG 198
Query: 164 NGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQN 223
+GLV Y++ F +V A+KVFDE+PDR + W +L+ GY+Q E+ L +F M +
Sbjct: 199 SGLVTSYSK-FMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEG 257
Query: 224 LRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWG 283
+ T+ SVLSA + R ++ L+ G V+ L+ ++GK
Sbjct: 258 VGVSRHTITSVLSAFTVSGDIDNGRSIHGLA------VKTGSGSDIVVSNALIDMYGKSK 311
Query: 284 NVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMV 343
+E++ F+ A +R + WN+++ + G L+LF M+ G RP+ VT+
Sbjct: 312 WLEEANSIFE---AMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGI-RPDIVTLT 367
Query: 344 SVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEH 403
+VL C ++ L G+ +H Y+I G SN+ + SL+DMY KCG L A+ VF+
Sbjct: 368 TVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDS 427
Query: 404 AVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERG 463
KD +N MI G V GE AL +F M G++P+ TF+G L ACSHSGFL G
Sbjct: 428 MRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEG 487
Query: 464 RQIFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCL 521
R M ++ T +HYAC ID+L R +EEA E+ S P N VW ++L C
Sbjct: 488 RNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCR 547
Query: 522 LHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGS 581
LH +LA KRL E++P GGYV+++N ++ +V +R MR++ +KK PG
Sbjct: 548 LHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGC 607
Query: 582 SWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHM 617
SWI + VH F G +HP+ + I+ L+ + HM
Sbjct: 608 SWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISHM 643
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 193/407 (47%), Gaps = 24/407 (5%)
Query: 132 LKVCFRSKDARCAEQVHAHIQKMGYLND-PSVSNGLVAVYARGFRNVVFARKVFDEIPDR 190
L+ C + KD +Q+H + + G+L+D P LV +YA+ + R V
Sbjct: 67 LQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCG---LMRRAVLVFGGSE 123
Query: 191 SEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWV 250
+V + +LI+G+ +G + ++ + M + P T S+L ++E+S +++
Sbjct: 124 RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVH 183
Query: 251 YFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMI 310
+L DS C+ V + LV + K+ +VE +++ FD + + V WNA++
Sbjct: 184 GLAFKLGFDS-----DCY--VGSGLVTSYSKFMSVEDAQKVFDEL--PDRDDSVLWNALV 234
Query: 311 SAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGH 370
+ Y Q + L +F M +EG H T+ SVLSA GD+ G+ +H + G
Sbjct: 235 NGYSQIFRFEDALLVFSKMREEGVGVSRH-TITSVLSAFTVSGDIDNGRSIHGLAVKTGS 293
Query: 371 KGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALR 430
GS+ +++ +LIDMY K L+ A +FE +D+ +N+++ G+ + L
Sbjct: 294 ----GSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLA 349
Query: 431 LFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEHYACYI----- 485
LF +M G++P+ T L C L +GR+I M S L + +I
Sbjct: 350 LFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLM 409
Query: 486 DLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEV 532
D+ + G + +A V SM K ++ W ++ G + S ELA ++
Sbjct: 410 DMYVKCGDLRDARMVFDSMRVK-DSASWNIMINGYGVQSCGELALDM 455
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 173/501 (34%), Positives = 267/501 (53%), Gaps = 35/501 (6%)
Query: 132 LKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVA--VYARGFRNVVFARKVFDEIPD 189
L+ C + ++ + Q+HA + K G + D ++ + + + +A+ VFD D
Sbjct: 21 LQRCSKQEELK---QIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGF-D 76
Query: 190 RSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSL-------- 241
R + W +I G++ S E L L+ M+ + T S+L ACS+L
Sbjct: 77 RPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQ 136
Query: 242 ---EISKI--ERWVYFLSELIDDS--TSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDR 294
+I+K+ E VY ++ LI+ T N + H + + W +V K + +
Sbjct: 137 IHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGK 196
Query: 295 ISAA-------GKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLS 347
+ A ++ + W MIS YVQ E L LF M + P++V++ + LS
Sbjct: 197 MDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEM-QNSDVEPDNVSLANALS 255
Query: 348 ACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSK 407
ACAQ+G L GKW+H YL +K I + +L LIDMY+KCG ++ A EVF++ K
Sbjct: 256 ACAQLGALEQGKWIHSYL----NKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKK 311
Query: 408 DVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIF 467
V + A+I G A +G G +A+ F +M + G++PN TF L+ACS++G +E G+ IF
Sbjct: 312 SVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF 371
Query: 468 RDMSFSTSL--TLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSR 525
M +L T+EHY C +DLL R G ++EA + MP KPN +WGALL C +H
Sbjct: 372 YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKN 431
Query: 526 VELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWIS 585
+EL +E+ + L+ +DP G YV AN A D++W+ + R M+E+G+ K PG S IS
Sbjct: 432 IELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTIS 491
Query: 586 VDGVVHEFLVGYLSHPQIEGI 606
++G HEFL G SHP+IE I
Sbjct: 492 LEGTTHEFLAGDRSHPEIEKI 512
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 191/434 (44%), Gaps = 55/434 (12%)
Query: 23 SCSI-VDHTPTTFTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIG--------HY 73
SCS ++H + LQ + L QIHAR+ + G QD+ T+ + +
Sbjct: 5 SCSFSLEHNLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDF 64
Query: 74 PPRIALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLK 133
P + VF P+ F +N +IR + L+ + N +TF LLK
Sbjct: 65 LPYAQI-VFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLK 123
Query: 134 VCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEV 193
C Q+HA I K+GY ND N L+ YA N A +FD IP+ +V
Sbjct: 124 ACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVT-GNFKLAHLLFDRIPEPDDV 182
Query: 194 T------------------------------CWTSLITGYAQSGHGEEVLQLFHMMVRQN 223
+ WT++I+GY Q+ +E LQLFH M +
Sbjct: 183 SWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSD 242
Query: 224 LRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWG 283
+ P N ++ + LSAC+ L + +W++ ++ + +S + VL+ ++ K G
Sbjct: 243 VEPDNVSLANALSACAQLGALEQGKWIH---SYLNKTRIRMDSV---LGCVLIDMYAKCG 296
Query: 284 NVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMV 343
+E++ E F I K+ V W A+IS Y G E +S F M K G +PN +T
Sbjct: 297 EMEEALEVFKNIK---KKSVQAWTALISGYAYHGHGREAISKFMEMQKMG-IKPNVITFT 352
Query: 344 SVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKE-VFE 402
+VL+AC+ G + GK + S+ N+ ++D+ + G LD AK + E
Sbjct: 353 AVLTACSYTGLVEEGKLI---FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQE 409
Query: 403 HAVSKDVVLFNAMI 416
+ + V++ A++
Sbjct: 410 MPLKPNAVIWGALL 423
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 191/564 (33%), Positives = 291/564 (51%), Gaps = 24/564 (4%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQG 104
Q HA + ++ + D + T L+G Y L+VF Y+ N + ++ ++ A +G
Sbjct: 139 QAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRG 198
Query: 105 HVSHVFSLFNDL--KHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSV 162
V +FN + + +D+ F+ +L + Q+H K G L ++
Sbjct: 199 RVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVAL 258
Query: 163 SNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQ 222
SN LV +Y++ ++ A K+FD DR+ +T W++++TGY+Q+G E ++LF M
Sbjct: 259 SNALVTMYSK-CESLNEACKMFDSSGDRNSIT-WSAMVTGYSQNGESLEAVKLFSRMFSA 316
Query: 223 NLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKW 282
++P T+V VL+ACS +I +E S L+ G H T LV ++ K
Sbjct: 317 GIKPSEYTIVGVLNACS--DICYLEEGKQLHSFLL----KLGFERHLFATTALVDMYAKA 370
Query: 283 GNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTM 342
G + +R+ FD + +R V W ++IS YVQ+ E L L+R M G PN TM
Sbjct: 371 GCLADARKGFDCLQ---ERDVALWTSLISGYVQNSDNEEALILYRRMKTAGII-PNDPTM 426
Query: 343 VSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFE 402
SVL AC+ + L LGK VH + I K G + ++L MYSKCG L+ VF
Sbjct: 427 ASVLKACSSLATLELGKQVHGHTI----KHGFGLEVPIGSALSTMYSKCGSLEDGNLVFR 482
Query: 403 HAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLER 462
+KDVV +NAMI GL+ NG+G++AL LF +M G++P+ TF+ +SACSH GF+ER
Sbjct: 483 RTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVER 542
Query: 463 GRQIFRDMSFSTSL--TLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGC 520
G F MS L ++HYAC +DLL+R G ++EA E + S +W LL C
Sbjct: 543 GWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSAC 602
Query: 521 LLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPG 580
H + EL ++L+ + S YV L+ + + DV + MR G+ K+ G
Sbjct: 603 KNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVG 662
Query: 581 SSWISVDGVVHEFLVGYLSHPQIE 604
SWI + H F+VG HP IE
Sbjct: 663 CSWIELKNQYHVFVVGDTMHPMIE 686
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/504 (26%), Positives = 247/504 (49%), Gaps = 31/504 (6%)
Query: 29 HTPTTFTNLLQGHIPRSHLLQ---IHARIFQLGAHQDNLLATRLIGHYPPRIALRVFHYL 85
HT T L H + +L+ +H +I + GA A L+ Y L H +
Sbjct: 13 HTSTLLKKLTH-HSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 86 HNP----NIFPFNAIIRVLAEQGHVSH---VFSLFNDLKHRVLAPNDFTFSFLLKVCFRS 138
N ++ +N++I ++ G +S V LF +++ + + PN +T + + K
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL 131
Query: 139 KDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTS 198
+ + Q HA + KM D V LV +Y + V KVF +P+R+ T W++
Sbjct: 132 QSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGL-VEDGLKVFAYMPERNTYT-WST 189
Query: 199 LITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMV--SVLSACSSLEISKIERWVYFLSEL 256
+++GYA G EE +++F++ +R+ + V +VLS+ ++ + R ++ +
Sbjct: 190 MVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCI--- 246
Query: 257 IDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQD 316
+ NG +++ LV ++ K ++ ++ + FD ++G R + W+AM++ Y Q+
Sbjct: 247 ---TIKNGLLGFVALSNALVTMYSKCESLNEACKMFD---SSGDRNSITWSAMVTGYSQN 300
Query: 317 GCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGS 376
G +E + LF M G +P+ T+V VL+AC+ I L GK +H +L+ +G + ++
Sbjct: 301 GESLEAVKLFSRMFSAG-IKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHL-- 357
Query: 377 NQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMP 436
T+L+DMY+K G L A++ F+ +DV L+ ++I G N + E+AL L+ +M
Sbjct: 358 --FATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMK 415
Query: 437 EFGLQPNAGTFLGALSACSHSGFLERGRQIF-RDMSFSTSLTLEHYACYIDLLARVGCIE 495
G+ PN T L ACS LE G+Q+ + L + + + ++ G +E
Sbjct: 416 TAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLE 475
Query: 496 EAIEVVTSMPFKPNNFVWGALLGG 519
+ V P K + W A++ G
Sbjct: 476 DGNLVFRRTPNK-DVVSWNAMISG 498
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 26/228 (11%)
Query: 337 PNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDR 396
P+ T++ L+ +Q +L G+ VH +I G I A L++ Y+KCG+L +
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQH----ANVLVNFYAKCGKLAK 67
Query: 397 AKEVFEHAVSKDVVLFNAMIMGLAVNG---EGEDALRLFYKMPEFGLQPNAGTFLGALSA 453
A +F + KDVV +N++I G + NG ++LF +M + PNA T G A
Sbjct: 68 AHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA 127
Query: 454 CSHSGFLERGRQI---------FRDMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSM 504
S GRQ F D+ TSL + + + G +E+ ++V M
Sbjct: 128 ESSLQSSTVGRQAHALVVKMSSFGDIYVDTSL--------VGMYCKAGLVEDGLKVFAYM 179
Query: 505 PFKPNNFVWGALLGGCLLHSRVELAQEV-SKRLVEVDPTSSGGYVMLA 551
P + N + W ++ G RVE A +V + L E + S YV A
Sbjct: 180 P-ERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTA 226
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 289 bits (739), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 181/549 (32%), Positives = 294/549 (53%), Gaps = 33/549 (6%)
Query: 46 HLLQIHARIFQLGAHQDNLLATRLIGHYPPRIALR-----VFHYLHNPNIFPFNAIIRVL 100
HL QIHARI + G QD L + I + VF + +P + +N +I+
Sbjct: 25 HLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHLIKGY 84
Query: 101 AEQGHVSHVFSLFNDLKHRVLA-PNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLND 159
+ + S+ + LA P+++TF ++KVC + R VH + ++G+ D
Sbjct: 85 SNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKD 144
Query: 160 PSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMM 219
V V Y + +++ ARKVF E+P+R+ V+ WT+L+ Y +SG EE +F +M
Sbjct: 145 VVVGTSFVDFYGK-CKDLFSARKVFGEMPERNAVS-WTALVVAYVKSGELEEAKSMFDLM 202
Query: 220 VRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVN-TVLVYL 278
+NL N +V L L +K +L D+ D ++ T ++
Sbjct: 203 PERNLGSWN-ALVDGLVKSGDLVNAK---------KLFDEMPK-----RDIISYTSMIDG 247
Query: 279 FGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPN 338
+ K G++ +R+ F+ R W+A+I Y Q+G P E +F M + +P+
Sbjct: 248 YAKGGDMVSARDLFEEARGVDVRA---WSALILGYAQNGQPNEAFKVFSEMCAK-NVKPD 303
Query: 339 HVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAK 398
MV ++SAC+Q+G L + V YL + N S+ + +LIDM +KCG +DRA
Sbjct: 304 EFIMVGLMSACSQMGCFELCEKVDSYL---HQRMNKFSSHYVVPALIDMNAKCGHMDRAA 360
Query: 399 EVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSG 458
++FE +D+V + +M+ G+A++G G +A+RLF KM + G+ P+ F L C S
Sbjct: 361 KLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSR 420
Query: 459 FLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGAL 516
+E G + F M +S + +HY+C ++LL+R G ++EA E++ SMPF+ + WG+L
Sbjct: 421 LVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSL 480
Query: 517 LGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIK 576
LGGC LH E+A+ V++ L E++P S+G YV+L+N A+ +W DV+ LR +M E GI
Sbjct: 481 LGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGIT 540
Query: 577 KQPGSSWIS 585
K G SWIS
Sbjct: 541 KICGRSWIS 549
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 288 bits (738), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 188/563 (33%), Positives = 297/563 (52%), Gaps = 54/563 (9%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
A VF + N+ + A+++ ++G V SLF + R N+ +++ +
Sbjct: 98 ARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLID 153
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWT 197
A +++ M + D S ++ R R V AR +FDE+ +R+ VT WT
Sbjct: 154 DGRIDKARKLY----DMMPVKDVVASTNMIGGLCREGR-VDEARLIFDEMRERNVVT-WT 207
Query: 198 SLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELI 257
++ITGY Q+ + +LF +M P+ T VS S Y LS I
Sbjct: 208 TMITGYRQNNRVDVARKLFEVM------PEK-TEVSWTSMLLG----------YTLSGRI 250
Query: 258 DDSTSNGE--------SCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAM 309
+D+ E +C+ ++ FG+ G + K+R FD + R W M
Sbjct: 251 EDAEEFFEVMPMKPVIACN-----AMIVGFGEVGEISKARRVFDLME---DRDNATWRGM 302
Query: 310 ISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIG 369
I AY + G +E L LF M K+G RP+ +++S+LS CA + L G+ VH +L+
Sbjct: 303 IKAYERKGFELEALDLFAQMQKQGV-RPSFPSLISILSVCATLASLQYGRQVHAHLVRCQ 361
Query: 370 HKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDAL 429
++ +A+ L+ MY KCG L +AK VF+ SKD++++N++I G A +G GE+AL
Sbjct: 362 FDDDV----YVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEAL 417
Query: 430 RLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDL 487
++F++MP G PN T + L+ACS++G LE G +IF M F + T+EHY+C +D+
Sbjct: 418 KIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDM 477
Query: 488 LARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGY 547
L R G +++A+E++ SM KP+ VWGALLG C HSR++LA+ +K+L E +P ++G Y
Sbjct: 478 LGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTY 537
Query: 548 VMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYL-SHPQIEGI 606
V+L++ AS +W DV+ +R MR + K PG SWI V VH F G + +HP+ I
Sbjct: 538 VLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMI 597
Query: 607 YLTL---TGLAKHMKAPSHCQSV 626
+ L GL + C V
Sbjct: 598 LMMLEKTDGLLREAGYSPDCSHV 620
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 168/412 (40%), Gaps = 83/412 (20%)
Query: 164 NGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQN 223
NGLV+ Y + R +V AR VF+ +P+R+ V WT+++ GY Q G E LF M +N
Sbjct: 83 NGLVSGYIKN-RMIVEARNVFELMPERN-VVSWTAMVKGYMQEGMVGEAESLFWRMPERN 140
Query: 224 LRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDS-TSNGESCHDSV-------NTVL 275
E+S W LIDD +D + +T +
Sbjct: 141 ------------------EVS----WTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNM 178
Query: 276 VYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTT 335
+ + G V+++R FD + +R VV W MI+ Y Q+ LF +M ++ T
Sbjct: 179 IGGLCREGRVDEARLIFDEMR---ERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK--T 233
Query: 336 RPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLD 395
+ +M+ + +I D E+ + K I N ++I + + G +
Sbjct: 234 EVSWTSMLLGYTLSGRIED------AEEFFEVMPMKPVIACN-----AMIVGFGEVGEIS 282
Query: 396 RAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACS 455
+A+ VF+ +D + MI G +AL LF +M + G++P+ + + LS C+
Sbjct: 283 KARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCA 342
Query: 456 HSGFLERGRQI--------FRDMSFSTSLTLEHYACYIDLL------------------- 488
L+ GRQ+ F D + S+ + Y +L+
Sbjct: 343 TLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNS 402
Query: 489 -----ARVGCIEEAIEVVTSMPFK---PNNFVWGALLGGCLLHSRVELAQEV 532
A G EEA+++ MP PN A+L C ++E E+
Sbjct: 403 IISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEI 454
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 23/223 (10%)
Query: 286 EKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSV 345
+++R+ FD +S +R VV WN ++S Y+++ VE ++F +M + N V+ ++
Sbjct: 65 KEARQLFDEMS---ERNVVSWNGLVSGYIKNRMIVEARNVFELMPER-----NVVSWTAM 116
Query: 346 LSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAV 405
+ Q G + E L + N S ++ LID GR+D+A+++++
Sbjct: 117 VKGYMQEGMVGEA----ESLFWRMPERNEVSWTVMFGGLID----DGRIDKARKLYDMMP 168
Query: 406 SKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQ 465
KDVV MI GL G ++A +F +M E N T+ ++ + ++ R+
Sbjct: 169 VKDVVASTNMIGGLCREGRVDEARLIFDEMRE----RNVVTWTTMITGYRQNNRVDVARK 224
Query: 466 IFRDMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKP 508
+F M T ++ L R+ EE EV MP KP
Sbjct: 225 LFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEV---MPMKP 264
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 288 bits (736), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 186/617 (30%), Positives = 312/617 (50%), Gaps = 51/617 (8%)
Query: 48 LQIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQ 103
+QIH I ++G +D + L+ Y A +VF + N+ + ++I A +
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 104 GHVSHVFSLF-NDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGY-LNDPS 161
LF ++ + PN T ++ C + +D E+V+A I+ G +ND
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLM 273
Query: 162 VSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVR 221
VS LV +Y + + A+++FDE + C ++ + Y + G E L +F++M+
Sbjct: 274 VS-ALVDMYMK-CNAIDVAKRLFDEYGASNLDLC-NAMASNYVRQGLTREALGVFNLMMD 330
Query: 222 QNLRPQNDTMVSVLSACSSLE-------------ISKIERWVYFLSELIDDSTSNGESCH 268
+RP +M+S +S+CS L + E W + LID CH
Sbjct: 331 SGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMK----CH 386
Query: 269 --DSVNTVLVYLFGK----W----------GNVEKSRERFDRISAAGKRGVVPWNAMISA 312
D+ + + K W G V+ + E F+ + ++ +V WN +IS
Sbjct: 387 RQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMP---EKNIVSWNTIISG 443
Query: 313 YVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKG 372
VQ E + +F M + + VTM+S+ SAC +G L L KW++ Y+ K
Sbjct: 444 LVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI----EKN 499
Query: 373 NIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLF 432
I + L T+L+DM+S+CG + A +F ++DV + A I +A+ G E A+ LF
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELF 559
Query: 433 YKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLE--HYACYIDLLAR 490
M E GL+P+ F+GAL+ACSH G +++G++IF M ++ E HY C +DLL R
Sbjct: 560 DDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGR 619
Query: 491 VGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVML 550
G +EEA++++ MP +PN+ +W +LL C + VE+A ++++ + P +G YV+L
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLL 679
Query: 551 ANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTL 610
+N AS +WND++ +RL M+EKG++K PG+S I + G HEF G SHP++ I L
Sbjct: 680 SNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAML 739
Query: 611 TGLAKHMKAPSHCQSVS 627
+++ H +S
Sbjct: 740 DEVSQRASHLGHVPDLS 756
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 135/448 (30%), Positives = 219/448 (48%), Gaps = 50/448 (11%)
Query: 91 FPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAH 150
F +N++IR A G + LF + + ++P+ +TF F L C +S+ Q+H
Sbjct: 100 FMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGL 159
Query: 151 IQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGE 210
I KMGY D V N LV YA + ARKVFDE+ +R+ V+ WTS+I GYA+ +
Sbjct: 160 IVKMGYAKDLFVQNSLVHFYAE-CGELDSARKVFDEMSERNVVS-WTSMICGYARRDFAK 217
Query: 211 EVLQLFHMMVR-QNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHD 269
+ + LF MVR + + P + TMV V+SAC+ LE + VY ++G +D
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIR------NSGIEVND 271
Query: 270 SVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIM 329
+ + LV ++ K ++ ++ FD A+ + NAM S YV+ G E L +F +M
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEYGAS---NLDLCNAMASNYVRQGLTREALGVFNLM 328
Query: 330 VKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYS 389
+ G RP+ ++M+S +S+C+Q+ ++ GK H Y++ G + S + +LIDMY
Sbjct: 329 MDSG-VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFE----SWDNICNALIDMYM 383
Query: 390 KCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEF----------- 438
KC R D A +F+ +K VV +N+++ G NGE + A F MPE
Sbjct: 384 KCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISG 443
Query: 439 ---------------------GLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFS-TSL 476
G+ + T + SAC H G L+ + I+ + + L
Sbjct: 444 LVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQL 503
Query: 477 TLEHYACYIDLLARVGCIEEAIEVVTSM 504
+ +D+ +R G E A+ + S+
Sbjct: 504 DVRLGTTLVDMFSRCGDPESAMSIFNSL 531
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 131/446 (29%), Positives = 204/446 (45%), Gaps = 56/446 (12%)
Query: 148 HAHIQKMGYLNDPSVSNGLVAVYAR-GFR-NVVFARKVFDEIPDRSEVTCWTSLITGYAQ 205
H + K G ND S LVA G R ++ FA++VF+ + SLI GYA
Sbjct: 52 HRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYAS 111
Query: 206 SGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGE 265
SG E + LF M+ + P T LSAC+ S+ + + LI G
Sbjct: 112 SGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAK---SRAKGNGIQIHGLI---VKMGY 165
Query: 266 SCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSL 325
+ V LV+ + + G ++ +R+ FD +S +R VV W +MI Y + + + L
Sbjct: 166 AKDLFVQNSLVHFYAECGELDSARKVFDEMS---ERNVVSWTSMICGYARRDFAKDAVDL 222
Query: 326 FRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLI 385
F MV++ PN VTMV V+SACA++ DL G+ V+ ++ + G I N ++ ++L+
Sbjct: 223 FFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSG----IEVNDLMVSALV 278
Query: 386 DMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAG 445
DMY KC +D AK +F+ + ++ L NAM G +AL +F M + G++P+
Sbjct: 279 DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRI 338
Query: 446 TFLGALSACS-----------HSGFLERG-------------------RQ-----IFRDM 470
+ L A+S+CS H L G RQ IF M
Sbjct: 339 SMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRM 398
Query: 471 SFSTSLTLEH-YACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELA 529
S T +T A Y++ G ++ A E +MP K N W ++ G + S E A
Sbjct: 399 SNKTVVTWNSIVAGYVE----NGEVDAAWETFETMPEK-NIVSWNTIISGLVQGSLFEEA 453
Query: 530 QEVSKRLVEVDPTSSGGYVMLANALA 555
EV + + ++ G M++ A A
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASA 479
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 186/617 (30%), Positives = 312/617 (50%), Gaps = 51/617 (8%)
Query: 48 LQIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQ 103
+QIH I ++G +D + L+ Y A +VF + N+ + ++I A +
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 104 GHVSHVFSLF-NDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGY-LNDPS 161
LF ++ + PN T ++ C + +D E+V+A I+ G +ND
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLM 273
Query: 162 VSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVR 221
VS LV +Y + + A+++FDE + C ++ + Y + G E L +F++M+
Sbjct: 274 VS-ALVDMYMK-CNAIDVAKRLFDEYGASNLDLC-NAMASNYVRQGLTREALGVFNLMMD 330
Query: 222 QNLRPQNDTMVSVLSACSSLE-------------ISKIERWVYFLSELIDDSTSNGESCH 268
+RP +M+S +S+CS L + E W + LID CH
Sbjct: 331 SGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMK----CH 386
Query: 269 --DSVNTVLVYLFGK----W----------GNVEKSRERFDRISAAGKRGVVPWNAMISA 312
D+ + + K W G V+ + E F+ + ++ +V WN +IS
Sbjct: 387 RQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMP---EKNIVSWNTIISG 443
Query: 313 YVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKG 372
VQ E + +F M + + VTM+S+ SAC +G L L KW++ Y+ K
Sbjct: 444 LVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI----EKN 499
Query: 373 NIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLF 432
I + L T+L+DM+S+CG + A +F ++DV + A I +A+ G E A+ LF
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELF 559
Query: 433 YKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLE--HYACYIDLLAR 490
M E GL+P+ F+GAL+ACSH G +++G++IF M ++ E HY C +DLL R
Sbjct: 560 DDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGR 619
Query: 491 VGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVML 550
G +EEA++++ MP +PN+ +W +LL C + VE+A ++++ + P +G YV+L
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLL 679
Query: 551 ANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTL 610
+N AS +WND++ +RL M+EKG++K PG+S I + G HEF G SHP++ I L
Sbjct: 680 SNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAML 739
Query: 611 TGLAKHMKAPSHCQSVS 627
+++ H +S
Sbjct: 740 DEVSQRASHLGHVPDLS 756
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 135/448 (30%), Positives = 219/448 (48%), Gaps = 50/448 (11%)
Query: 91 FPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAH 150
F +N++IR A G + LF + + ++P+ +TF F L C +S+ Q+H
Sbjct: 100 FMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGL 159
Query: 151 IQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGE 210
I KMGY D V N LV YA + ARKVFDE+ +R+ V+ WTS+I GYA+ +
Sbjct: 160 IVKMGYAKDLFVQNSLVHFYAE-CGELDSARKVFDEMSERNVVS-WTSMICGYARRDFAK 217
Query: 211 EVLQLFHMMVR-QNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHD 269
+ + LF MVR + + P + TMV V+SAC+ LE + VY ++G +D
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIR------NSGIEVND 271
Query: 270 SVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIM 329
+ + LV ++ K ++ ++ FD A+ + NAM S YV+ G E L +F +M
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEYGAS---NLDLCNAMASNYVRQGLTREALGVFNLM 328
Query: 330 VKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYS 389
+ G RP+ ++M+S +S+C+Q+ ++ GK H Y++ G + S + +LIDMY
Sbjct: 329 MDSG-VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFE----SWDNICNALIDMYM 383
Query: 390 KCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEF----------- 438
KC R D A +F+ +K VV +N+++ G NGE + A F MPE
Sbjct: 384 KCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISG 443
Query: 439 ---------------------GLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFS-TSL 476
G+ + T + SAC H G L+ + I+ + + L
Sbjct: 444 LVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQL 503
Query: 477 TLEHYACYIDLLARVGCIEEAIEVVTSM 504
+ +D+ +R G E A+ + S+
Sbjct: 504 DVRLGTTLVDMFSRCGDPESAMSIFNSL 531
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 131/446 (29%), Positives = 204/446 (45%), Gaps = 56/446 (12%)
Query: 148 HAHIQKMGYLNDPSVSNGLVAVYAR-GFR-NVVFARKVFDEIPDRSEVTCWTSLITGYAQ 205
H + K G ND S LVA G R ++ FA++VF+ + SLI GYA
Sbjct: 52 HRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYAS 111
Query: 206 SGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGE 265
SG E + LF M+ + P T LSAC+ S+ + + LI G
Sbjct: 112 SGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAK---SRAKGNGIQIHGLI---VKMGY 165
Query: 266 SCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSL 325
+ V LV+ + + G ++ +R+ FD +S +R VV W +MI Y + + + L
Sbjct: 166 AKDLFVQNSLVHFYAECGELDSARKVFDEMS---ERNVVSWTSMICGYARRDFAKDAVDL 222
Query: 326 FRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLI 385
F MV++ PN VTMV V+SACA++ DL G+ V+ ++ + G I N ++ ++L+
Sbjct: 223 FFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSG----IEVNDLMVSALV 278
Query: 386 DMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAG 445
DMY KC +D AK +F+ + ++ L NAM G +AL +F M + G++P+
Sbjct: 279 DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRI 338
Query: 446 TFLGALSACS-----------HSGFLERG-------------------RQ-----IFRDM 470
+ L A+S+CS H L G RQ IF M
Sbjct: 339 SMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRM 398
Query: 471 SFSTSLTLEH-YACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELA 529
S T +T A Y++ G ++ A E +MP K N W ++ G + S E A
Sbjct: 399 SNKTVVTWNSIVAGYVE----NGEVDAAWETFETMPEK-NIVSWNTIISGLVQGSLFEEA 453
Query: 530 QEVSKRLVEVDPTSSGGYVMLANALA 555
EV + + ++ G M++ A A
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASA 479
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 174/513 (33%), Positives = 278/513 (54%), Gaps = 36/513 (7%)
Query: 128 FSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEI 187
+ LL C + R ++VHAH+ K YL + L+ Y + + ARKV DE+
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGK-CDCLEDARKVLDEM 113
Query: 188 PDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSAC---SSLEIS 244
P+++ V WT++I+ Y+Q+GH E L +F M+R + +P T +VL++C S L +
Sbjct: 114 PEKN-VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLG 172
Query: 245 K-----IERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG 299
K I +W Y DS H V + L+ ++ K G ++++RE F+ +
Sbjct: 173 KQIHGLIVKWNY-------DS-------HIFVGSSLLDMYAKAGQIKEAREIFECLP--- 215
Query: 300 KRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGK 359
+R VV A+I+ Y Q G E L +F + EG + PN+VT S+L+A + + L GK
Sbjct: 216 ERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMS-PNYVTYASLLTALSGLALLDHGK 274
Query: 360 WVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGL 419
H +++ + + +L SLIDMYSKCG L A+ +F++ + + +NAM++G
Sbjct: 275 QAHCHVL----RRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGY 330
Query: 420 AVNGEGEDALRLFYKM-PEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM---SFSTS 475
+ +G G + L LF M E ++P+A T L LS CSH + G IF M + T
Sbjct: 331 SKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTK 390
Query: 476 LTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKR 535
EHY C +D+L R G I+EA E + MP KP V G+LLG C +H V++ + V +R
Sbjct: 391 PGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRR 450
Query: 536 LVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLV 595
L+E++P ++G YV+L+N AS +W DV+ +R M +K + K+PG SWI + +H F
Sbjct: 451 LIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHA 510
Query: 596 GYLSHPQIEGIYLTLTGLAKHMKAPSHCQSVSC 628
+HP+ E + + ++ MK + +SC
Sbjct: 511 NDRTHPRREEVLAKMKEISIKMKQAGYVPDLSC 543
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 195/420 (46%), Gaps = 49/420 (11%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQG 104
++HA + + L TRL+ Y A +V + N+ + A+I ++ G
Sbjct: 73 RVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTG 132
Query: 105 HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSN 164
H S ++F ++ PN+FTF+ +L C R+ +Q+H I K Y + V +
Sbjct: 133 HSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGS 192
Query: 165 GLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNL 224
L+ +YA+ + + AR++F+ +P+R V+C T++I GYAQ G EE L++FH + + +
Sbjct: 193 SLLDMYAKAGQ-IKEAREIFECLPERDVVSC-TAIIAGYAQLGLDEEALEMFHRLHSEGM 250
Query: 225 RPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSV-----------NT 273
P T S+L+A S L L+D +G+ H V
Sbjct: 251 SPNYVTYASLLTALSGL-------------ALLD----HGKQAHCHVLRRELPFYAVLQN 293
Query: 274 VLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEG 333
L+ ++ K GN+ +R FD + +R + WNAM+ Y + G E L LFR+M E
Sbjct: 294 SLIDMYSKCGNLSYARRLFDNMP---ERTAISWNAMLVGYSKHGLGREVLELFRLMRDEK 350
Query: 334 TTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGR 393
+P+ VT+++VLS C+ G + + +++ + G+ ++DM + GR
Sbjct: 351 RVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHY--GCIVDMLGRAGR 408
Query: 394 LDRAKEVFEHAVSKDVV-----LFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFL 448
+D A E + SK L A + L+V+ RL PE NAG ++
Sbjct: 409 IDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPE-----NAGNYV 463
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 175/576 (30%), Positives = 299/576 (51%), Gaps = 26/576 (4%)
Query: 50 IHARIFQLGAHQDNLLATRLIGHYPP--RI--ALRVFHYLHNPNIFPFNAIIRVLAEQGH 105
IH + G + LL + ++ Y R+ A +VF + + +N +I +
Sbjct: 141 IHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEM 200
Query: 106 VSHVFSLFNDLKHRVLAPNDFTFSF-LLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSN 164
+F DL + D T +L ++ R Q+H+ K G + V
Sbjct: 201 YVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLT 260
Query: 165 GLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNL 224
G +++Y++ + + +F E + ++ + ++I GY +G E L LF ++
Sbjct: 261 GFISLYSKCGK-IKMGSALFREF-RKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGA 318
Query: 225 RPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGN 284
R ++ T+VS++ L + S + H SV+T L ++ K
Sbjct: 319 RLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLS---------HASVSTALTTVYSKLNE 369
Query: 285 VEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVS 344
+E +R+ FD + ++ + WNAMIS Y Q+G + +SLFR M K + PN VT+
Sbjct: 370 IESARKLFDE---SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFS-PNPVTITC 425
Query: 345 VLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHA 404
+LSACAQ+G LSLGKWVH+ + S + +I ++T+LI MY+KCG + A+ +F+
Sbjct: 426 ILSACAQLGALSLGKWVHDLVRSTDFESSI----YVSTALIGMYAKCGSIAEARRLFDLM 481
Query: 405 VSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGR 464
K+ V +N MI G ++G+G++AL +FY+M G+ P TFL L ACSH+G ++ G
Sbjct: 482 TKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGD 541
Query: 465 QIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLL 522
+IF M + +++HYAC +D+L R G ++ A++ + +M +P + VW LLG C +
Sbjct: 542 EIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRI 601
Query: 523 HSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSS 582
H LA+ VS++L E+DP + G +V+L+N ++DR + + +R +++ + K PG +
Sbjct: 602 HKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYT 661
Query: 583 WISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMK 618
I + H F G SHPQ++ IY L L M+
Sbjct: 662 LIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMR 697
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 138/505 (27%), Positives = 236/505 (46%), Gaps = 31/505 (6%)
Query: 30 TPTTFTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPPRIAL----RVFHYL 85
+ T+ + + SHL Q HA+I G D L T+L A+ +F +
Sbjct: 19 SKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSV 78
Query: 86 HNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRV-LAPNDFTFSFLLKVCFRSKDARCA 144
P++F FN ++R + S+F L+ L PN T++F + +D R
Sbjct: 79 QRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAG 138
Query: 145 EQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYA 204
+H G ++ + + +V +Y + +R V ARKVFD +P++ + W ++I+GY
Sbjct: 139 RVIHGQAVVDGCDSELLLGSNIVKMYFKFWR-VEDARKVFDRMPEKDTI-LWNTMISGYR 196
Query: 205 QSGHGEEVLQLFHMMVRQN-LRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSN 263
++ E +Q+F ++ ++ R T++ +L A + L+ ++ ++ L +T
Sbjct: 197 KNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSL------ATKT 250
Query: 264 GESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGL 323
G HD V T + L+ K G ++ F K +V +NAMI Y +G L
Sbjct: 251 GCYSHDYVLTGFISLYSKCGKIKMGSALFREFR---KPDIVAYNAMIHGYTSNGETELSL 307
Query: 324 SLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATS 383
SLF+ ++ G R T+VS++ G L L +H Y + K N S+ ++T+
Sbjct: 308 SLFKELMLSG-ARLRSSTLVSLVPVS---GHLMLIYAIHGYCL----KSNFLSHASVSTA 359
Query: 384 LIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPN 443
L +YSK ++ A+++F+ + K + +NAMI G NG EDA+ LF +M + PN
Sbjct: 360 LTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPN 419
Query: 444 AGTFLGALSACSHSGFLERGR---QIFRDMSFSTSLTLEHYACYIDLLARVGCIEEAIEV 500
T LSAC+ G L G+ + R F +S+ + I + A+ G I EA +
Sbjct: 420 PVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVS--TALIGMYAKCGSIAEARRL 477
Query: 501 VTSMPFKPNNFVWGALLGGCLLHSR 525
M K N W ++ G LH +
Sbjct: 478 FDLMT-KKNEVTWNTMISGYGLHGQ 501
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 138/323 (42%), Gaps = 12/323 (3%)
Query: 218 MMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVY 277
M++R +T +++S + L+ K + L++ +G S+ T L
Sbjct: 1 MLLRTVSSATAETTAALISKNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQ 60
Query: 278 LFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRP 337
G + +R+ F + + V +N ++ + + P LS+F + K +P
Sbjct: 61 RLSDLGAIYYARDIFLSVQ---RPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKP 117
Query: 338 NHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRA 397
N T +SA + D G+ +H + G S +L ++++ MY K R++ A
Sbjct: 118 NSSTYAFAISAASGFRDDRAGRVIHGQAVVDG----CDSELLLGSNIVKMYFKFWRVEDA 173
Query: 398 KEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKM-PEFGLQPNAGTFLGALSACSH 456
++VF+ KD +L+N MI G N +++++F + E + + T L L A +
Sbjct: 174 RKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAE 233
Query: 457 SGFLERGRQIFRDMSFSTSLTLEHYAC--YIDLLARVGCIEEAIEVVTSMPFKPNNFVWG 514
L G QI ++ T Y +I L ++ G I+ + KP+ +
Sbjct: 234 LQELRLGMQI-HSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFR-KPDIVAYN 291
Query: 515 ALLGGCLLHSRVELAQEVSKRLV 537
A++ G + EL+ + K L+
Sbjct: 292 AMIHGYTSNGETELSLSLFKELM 314
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 182/640 (28%), Positives = 310/640 (48%), Gaps = 72/640 (11%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQG 104
Q HARI + GA D ++ +LI Y A V + +P I+ F+++I L +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 105 HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSN 164
+ +F+ + L P+ L KVC + +Q+H G D V
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 165 GLVAVYARGFRNVVFARKVFDEIPDRSEVTC----------------------------- 195
+ +Y R R + ARKVFD + D+ VTC
Sbjct: 156 SMFHMYMRCGR-MGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 196 -----WTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWV 250
W +++G+ +SG+ +E + +F + P T+ SVL + E+ + R +
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 251 Y-------------FLSELIDDSTSNG------------ESCHDSVNTVLVYLFGKWGNV 285
+ +S +ID +G E V + + G V
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 286 EKSRERFDRISAAG-KRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVS 344
+K+ E F+ + VV W ++I+ Q+G +E L LFR M G +PNHVT+ S
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGV-KPNHVTIPS 393
Query: 345 VLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHA 404
+L AC I L G+ H + + + ++ N + ++LIDMY+KCGR++ ++ VF
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRV----HLLDNVHVGSALIDMYAKCGRINLSQIVFNMM 449
Query: 405 VSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGR 464
+K++V +N+++ G +++G+ ++ + +F + L+P+ +F LSAC G + G
Sbjct: 450 PTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGW 509
Query: 465 QIFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLL 522
+ F+ MS + LEHY+C ++LL R G ++EA +++ MPF+P++ VWGALL C L
Sbjct: 510 KYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRL 569
Query: 523 HSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSS 582
+ V+LA+ +++L ++P + G YV+L+N A+ W +V ++R +M G+KK PG S
Sbjct: 570 QNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCS 629
Query: 583 WISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMKAPSH 622
WI V V+ L G SHPQI+ I + ++K M+ H
Sbjct: 630 WIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGH 669
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 285 bits (729), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 173/581 (29%), Positives = 304/581 (52%), Gaps = 24/581 (4%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQG 104
+IH + + G D T L Y A +VF + ++ +N I+ ++ G
Sbjct: 156 EIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNG 215
Query: 105 HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSN 164
+ + L P+ T +L + +++H + + G+ + ++S
Sbjct: 216 MARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIST 275
Query: 165 GLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNL 224
LV +YA+ ++ AR++FD + +R+ V W S+I Y Q+ + +E + +F M+ + +
Sbjct: 276 ALVDMYAKC-GSLETARQLFDGMLERN-VVSWNSMIDAYVQNENPKEAMLIFQKMLDEGV 333
Query: 225 RPQNDTMVSVLSACSSLEISKIERWVYFLS-ELIDDSTSNGESCHDSVNTVLVYLFGKWG 283
+P + +++ L AC+ L + R+++ LS EL G + SV L+ ++ K
Sbjct: 334 KPTDVSVMGALHACADLGDLERGRFIHKLSVEL-------GLDRNVSVVNSLISMYCKCK 386
Query: 284 NVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMV 343
V+ + F ++ + R +V WNAMI + Q+G P++ L+ F M + T +P+ T V
Sbjct: 387 EVDTAASMFGKLQS---RTLVSWNAMILGFAQNGRPIDALNYFSQM-RSRTVKPDTFTYV 442
Query: 344 SVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEH 403
SV++A A++ KW+H ++ + + N + T+L+DMY+KCG + A+ +F+
Sbjct: 443 SVITAIAELSITHHAKWIHGVVM----RSCLDKNVFVTTALVDMYAKCGAIMIARLIFDM 498
Query: 404 AVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERG 463
+ V +NAMI G +G G+ AL LF +M + ++PN TFL +SACSHSG +E G
Sbjct: 499 MSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAG 558
Query: 464 RQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCL 521
+ F M ++S L+++HY +DLL R G + EA + + MP KP V+GA+LG C
Sbjct: 559 LKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQ 618
Query: 522 LHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGS 581
+H V A++ ++RL E++P G +V+LAN + W V +R+ M +G++K PG
Sbjct: 619 IHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGC 678
Query: 582 SWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMKAPSH 622
S + + VH F G +HP + IY L L H+K +
Sbjct: 679 SMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGY 719
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 145/509 (28%), Positives = 263/509 (51%), Gaps = 42/509 (8%)
Query: 47 LLQIHARIFQLGAHQDNLLATRLIGHY----PPRIALRVFHYLHNPNIFPFNAIIRVLAE 102
L QI +F+ G +Q++ T+L+ + A RVF + + ++ +++ A+
Sbjct: 53 LRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAK 112
Query: 103 QGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSV 162
+ F +++ + P + F++LLKVC + R +++H + K G+ D
Sbjct: 113 VSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFA 172
Query: 163 SNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQ 222
GL +YA+ R V ARKVFD +P+R V+ W +++ GY+Q+G L++ M +
Sbjct: 173 MTGLENMYAKC-RQVNEARKVFDRMPERDLVS-WNTIVAGYSQNGMARMALEMVKSMCEE 230
Query: 223 NLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKW 282
NL+P T+VSVL A S+L + + + E+ + +G +++T LV ++ K
Sbjct: 231 NLKPSFITIVSVLPAVSALRLISVGK------EIHGYAMRSGFDSLVNISTALVDMYAKC 284
Query: 283 GNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTM 342
G++E +R+ FD + +R VV WN+MI AYVQ+ P E + +F+ M+ EG +P V++
Sbjct: 285 GSLETARQLFDGML---ERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG-VKPTDVSV 340
Query: 343 VSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFE 402
+ L ACA +GDL G+++H+ + +G N+ + SLI MY KC +D A +F
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVS----VVNSLISMYCKCKEVDTAASMFG 396
Query: 403 HAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLER 462
S+ +V +NAMI+G A NG DAL F +M ++P+ T++ ++A +
Sbjct: 397 KLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHH 456
Query: 463 GRQIF---------RDMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVW 513
+ I +++ +T+L +D+ A+ G I A ++ M + + W
Sbjct: 457 AKWIHGVVMRSCLDKNVFVTTAL--------VDMYAKCGAIMIA-RLIFDMMSERHVTTW 507
Query: 514 GALLGGCLLH----SRVELAQEVSKRLVE 538
A++ G H + +EL +E+ K ++
Sbjct: 508 NAMIDGYGTHGFGKAALELFEEMQKGTIK 536
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 12/200 (6%)
Query: 371 KGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALR 430
K + T L+ ++ + G +D A VFE SK VL++ M+ G A + + AL+
Sbjct: 62 KNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQ 121
Query: 431 LFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEHYAC--YIDLL 488
F +M ++P F L C L G++I + + +L+ +A ++
Sbjct: 122 FFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEI-HGLLVKSGFSLDLFAMTGLENMY 180
Query: 489 ARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYV 548
A+ + EA +V MP + + W ++ G + +A E+ K + E + S ++
Sbjct: 181 AKCRQVNEARKVFDRMP-ERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPS--FI 237
Query: 549 MLANALASDRQWNDVSALRL 568
+ + L + VSALRL
Sbjct: 238 TIVSVLPA------VSALRL 251
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 170/582 (29%), Positives = 287/582 (49%), Gaps = 22/582 (3%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQG 104
Q+HA +LG +N + L+ Y AL F N+ +N ++
Sbjct: 410 QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 469
Query: 105 HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSN 164
+ + F +F ++ + PN +T+ +LK C R D EQ+H+ I K + + V +
Sbjct: 470 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529
Query: 165 GLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNL 224
L+ +YA+ + A + + +V WT++I GY Q ++ L F M+ + +
Sbjct: 530 VLIDMYAK-LGKLDTAWDILIRFAGK-DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 587
Query: 225 RPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGN 284
R + + +SAC+ L+ K + ++ + +G S LV L+ + G
Sbjct: 588 RSDEVGLTNAVSACAGLQALKEGQQIH------AQACVSGFSSDLPFQNALVTLYSRCGK 641
Query: 285 VEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVS 344
+E+S F++ A + WNA++S + Q G E L +F M +EG N+ T S
Sbjct: 642 IEESYLAFEQTEAGDN---IAWNALVSGFQQSGNNEEALRVFVRMNREGIDN-NNFTFGS 697
Query: 345 VLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHA 404
+ A ++ ++ GK VH + G+ S + +LI MY+KCG + A++ F
Sbjct: 698 AVKAASETANMKQGKQVHAVITKTGYD----SETEVCNALISMYAKCGSISDAEKQFLEV 753
Query: 405 VSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGR 464
+K+ V +NA+I + +G G +AL F +M ++PN T +G LSACSH G +++G
Sbjct: 754 STKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGI 813
Query: 465 QIFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLL 522
F M+ + S EHY C +D+L R G + A E + MP KP+ VW LL C++
Sbjct: 814 AYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVV 873
Query: 523 HSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSS 582
H +E+ + + L+E++P S YV+L+N A ++W+ R +M+EKG+KK+PG S
Sbjct: 874 HKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQS 933
Query: 583 WISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMKAPSHCQ 624
WI V +H F VG +HP + I+ L K + Q
Sbjct: 934 WIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQ 975
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 156/554 (28%), Positives = 258/554 (46%), Gaps = 36/554 (6%)
Query: 30 TPT--TFTNLLQ----GHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPPR----IAL 79
TP TF+ +L+ G + + QIHARI G ++ LI Y +A
Sbjct: 183 TPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLAR 242
Query: 80 RVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSK 139
RVF L + + A+I L++ + LF D+ + P + FS +L C + +
Sbjct: 243 RVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIE 302
Query: 140 DARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSL 199
EQ+H + K+G+ +D V N LV++Y N++ A +F + R VT + +L
Sbjct: 303 SLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFH-LGNLISAEHIFSNMSQRDAVT-YNTL 360
Query: 200 ITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDD 259
I G +Q G+GE+ ++LF M L P ++T+ S++ ACS+ + ++ +L
Sbjct: 361 INGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSA------DGTLFRGQQLHAY 414
Query: 260 STSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCP 319
+T G + ++ + L+ L+ K ++E + + F VV WN M+ AY
Sbjct: 415 TTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEV---ENVVLWNVMLVAYGLLDDL 471
Query: 320 VEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQI 379
+FR M E PN T S+L C ++GDL LG+ +H +I K N N
Sbjct: 472 RNSFRIFRQMQIEEIV-PNQYTYPSILKTCIRLGDLELGEQIHSQII----KTNFQLNAY 526
Query: 380 LATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFG 439
+ + LIDMY+K G+LD A ++ KDVV + MI G + AL F +M + G
Sbjct: 527 VCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 586
Query: 440 LQPNAGTFLGALSACSHSGFLERGRQIFRDM---SFSTSLTLEHYACYIDLLARVGCIEE 496
++ + A+SAC+ L+ G+QI FS+ L ++ + L +R G IEE
Sbjct: 587 IRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN--ALVTLYSRCGKIEE 644
Query: 497 AIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRL----VEVDPTSSGGYVMLAN 552
+ + +N W AL+ G E A V R+ ++ + + G V A+
Sbjct: 645 SY-LAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAAS 703
Query: 553 ALASDRQWNDVSAL 566
A+ +Q V A+
Sbjct: 704 ETANMKQGKQVHAV 717
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/479 (27%), Positives = 233/479 (48%), Gaps = 27/479 (5%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHYPPRI----ALRVFHYLHNPNIFPFNAIIRVLAEQG 104
++H++I +LG + L+ +L Y + A +VF + IF +N +I+ LA +
Sbjct: 106 KLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRN 165
Query: 105 HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDA-RCAEQVHAHIQKMGYLNDPSVS 163
+ VF LF + + PN+ TFS +L+ C A EQ+HA I G + V
Sbjct: 166 LIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVC 225
Query: 164 NGLVAVYAR-GFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQ 222
N L+ +Y+R GF V AR+VFD + + + W ++I+G +++ E ++LF M
Sbjct: 226 NPLIDLYSRNGF--VDLARRVFDGLRLKDH-SSWVAMISGLSKNECEAEAIRLFCDMYVL 282
Query: 223 NLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKW 282
+ P SVLSAC +E +I ++ L + G S V LV L+
Sbjct: 283 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL------GFSSDTYVCNALVSLYFHL 336
Query: 283 GNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTM 342
GN+ + F +S +R V +N +I+ Q G + + LF+ M +G P+ T+
Sbjct: 337 GNLISAEHIFSNMS---QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDG-LEPDSNTL 392
Query: 343 VSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFE 402
S++ AC+ G L G+ +H Y +G SN + +L+++Y+KC ++ A + F
Sbjct: 393 ASLVVACSADGTLFRGQQLHAYTTKLG----FASNNKIEGALLNLYAKCADIETALDYFL 448
Query: 403 HAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLER 462
++VVL+N M++ + + ++ R+F +M + PN T+ L C G LE
Sbjct: 449 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL 508
Query: 463 GRQIFRDMSFSTSLTLEHYAC--YIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGG 519
G QI + T+ L Y C ID+ A++G ++ A +++ K + W ++ G
Sbjct: 509 GEQIHSQI-IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAG 565
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 199/412 (48%), Gaps = 30/412 (7%)
Query: 114 NDLKHRVLAPNDFTFSFLLKVCFRSKDA-RCAEQVHAHIQKMGYLNDPSVSNGLVAVYAR 172
+ +++R + PN T +LL+ C ++ + ++H+ I K+G ++ +S L Y
Sbjct: 73 DSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYL- 131
Query: 173 GFRNVVF-ARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTM 231
F+ ++ A KVFDE+P+R+ T W +I A EV LF MV +N+ P T
Sbjct: 132 -FKGDLYGAFKVFDEMPERTIFT-WNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTF 189
Query: 232 VSVLSAC--SSLEISKIERW-VYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKS 288
VL AC S+ +E+ L + + DST V L+ L+ + G V+ +
Sbjct: 190 SGVLEACRGGSVAFDVVEQIHARILYQGLRDSTV--------VCNPLIDLYSRNGFVDLA 241
Query: 289 RERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSA 348
R FD + W AMIS ++ C E + LF M G P SVLSA
Sbjct: 242 RRVFDGLRLKDHSS---WVAMISGLSKNECEAEAIRLFCDMYVLGIM-PTPYAFSSVLSA 297
Query: 349 CAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKD 408
C +I L +G+ +H ++ +G S+ + +L+ +Y G L A+ +F + +D
Sbjct: 298 CKKIESLEIGEQLHGLVLKLG----FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD 353
Query: 409 VVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIF- 467
V +N +I GL+ G GE A+ LF +M GL+P++ T + ACS G L RG+Q+
Sbjct: 354 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 413
Query: 468 --RDMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALL 517
+ F+++ +E ++L A+ IE A++ + N +W +L
Sbjct: 414 YTTKLGFASNNKIE--GALLNLYAKCADIETALDYFLETEVE-NVVLWNVML 462
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 187/618 (30%), Positives = 307/618 (49%), Gaps = 43/618 (6%)
Query: 20 FRSSCSIVDHTP----TTFTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPP 75
F + + D P ++ +++G++ R+ L +F++ +D ++ Y
Sbjct: 111 FELARKLFDEMPERDLVSWNVMIKGYV-RNRNLGKARELFEIMPERDVCSWNTMLSGYAQ 169
Query: 76 R----IALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFL 131
A VF + N +NA++ + + LF ++ L +++ L
Sbjct: 170 NGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALV----SWNCL 225
Query: 132 LKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRS 191
L + K A Q + + D N ++ YA+ + + AR++FDE P +
Sbjct: 226 LGGFVKKKKIVEARQFFDSMN----VRDVVSWNTIITGYAQSGK-IDEARQLFDESPVQ- 279
Query: 192 EVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVY 251
+V WT++++GY Q+ EE +LF M +N N + + +E++K
Sbjct: 280 DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQG-ERMEMAK------ 332
Query: 252 FLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMIS 311
EL D S ++ ++ + + G + +++ FD++ KR V W AMI+
Sbjct: 333 ---ELFDVMPCRNVSTWNT----MITGYAQCGKISEAKNLFDKMP---KRDPVSWAAMIA 382
Query: 312 AYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHK 371
Y Q G E L LF M +EG R N + S LS CA + L LGK +H L+ K
Sbjct: 383 GYSQSGHSFEALRLFVQMEREGG-RLNRSSFSSALSTCADVVALELGKQLHGRLV----K 437
Query: 372 GNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRL 431
G + + +L+ MY KCG ++ A ++F+ KD+V +N MI G + +G GE ALR
Sbjct: 438 GGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRF 497
Query: 432 FYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMS--FSTSLTLEHYACYIDLLA 489
F M GL+P+ T + LSACSH+G +++GRQ F M+ + +HYAC +DLL
Sbjct: 498 FESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLG 557
Query: 490 RVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVM 549
R G +E+A ++ +MPF+P+ +WG LLG +H ELA+ + ++ ++P +SG YV+
Sbjct: 558 RAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVL 617
Query: 550 LANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLT 609
L+N AS +W DV LR+ MR+KG+KK PG SWI + H F VG HP+ + I+
Sbjct: 618 LSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAF 677
Query: 610 LTGLAKHMKAPSHCQSVS 627
L L MK + S
Sbjct: 678 LEELDLRMKKAGYVSKTS 695
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 172/420 (40%), Gaps = 78/420 (18%)
Query: 164 NGLVAVYARGFRNVVF--ARKVFDEIPDRS------------------------------ 191
NG+++ Y RN F ARK+FDE+P+R
Sbjct: 99 NGMISGY---LRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPER 155
Query: 192 EVTCWTSLITGYAQSGHGEEVLQLFHMMVRQN---------LRPQNDTMVSVLSACSSLE 242
+V W ++++GYAQ+G ++ +F M +N QN M S E
Sbjct: 156 DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRE 215
Query: 243 ISKIERWVYFLSELIDDST-SNGESCHDSVN-------TVLVYLFGKWGNVEKSRERFDR 294
+ W L + DS+N ++ + + G ++++R+ FD
Sbjct: 216 NWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE 275
Query: 295 ISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGD 354
+ V W AM+S Y+Q+ E LF M + N V+ ++L+ Q
Sbjct: 276 SPV---QDVFTWTAMVSGYIQNRMVEEARELFDKMPER-----NEVSWNAMLAGYVQGER 327
Query: 355 LSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNA 414
+ + K + + + N ++I Y++CG++ AK +F+ +D V + A
Sbjct: 328 MEMAKELFDVMPC--------RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAA 379
Query: 415 MIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFST 474
MI G + +G +ALRLF +M G + N +F ALS C+ LE G+Q+ +
Sbjct: 380 MIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGG 439
Query: 475 SLTLEHYACYID-----LLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELA 529
T C++ + + G IEEA ++ M K + W ++ G H E+A
Sbjct: 440 YET----GCFVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHGFGEVA 494
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 151/342 (44%), Gaps = 43/342 (12%)
Query: 180 ARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACS 239
A +VF +P S V+ + +I+GY ++G E +LF M ++L N V +
Sbjct: 83 ALRVFKRMPRWSSVS-YNGMISGYLRNGEFELARKLFDEMPERDLVSWN---VMIKGYVR 138
Query: 240 SLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG 299
+ + K + E + C S NT+L + + G V+ +R FDR+
Sbjct: 139 NRNLGKARELFEIMPER--------DVC--SWNTMLSG-YAQNGCVDDARSVFDRMP--- 184
Query: 300 KRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGK 359
++ V WNA++SAYVQ+ E LF+ +R N V C G + K
Sbjct: 185 EKNDVSWNALLSAYVQNSKMEEACMLFK-------SRENWAL---VSWNCLLGGFVKKKK 234
Query: 360 WVH--EYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIM 417
V ++ S+ + + N I I Y++ G++D A+++F+ + +DV + AM+
Sbjct: 235 IVEARQFFDSMNVRDVVSWNTI-----ITGYAQSGKIDEARQLFDESPVQDVFTWTAMVS 289
Query: 418 GLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLT 477
G N E+A LF KMPE N ++ L+ +E +++F M T
Sbjct: 290 GYIQNRMVEEARELFDKMPE----RNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVST 345
Query: 478 LEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGG 519
+ I A+ G I EA + MP K + W A++ G
Sbjct: 346 ---WNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAG 383
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 124/291 (42%), Gaps = 54/291 (18%)
Query: 299 GKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLG 358
G + WN IS+Y++ G E L +F+ M R + V+ ++S + G+ L
Sbjct: 60 GDSDIKEWNVAISSYMRTGRCNEALRVFKRM-----PRWSSVSYNGMISGYLRNGEFELA 114
Query: 359 KWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMG 418
+ + + + + + +I Y + L +A+E+FE +DV +N M+ G
Sbjct: 115 RKLFDEMPE--------RDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSG 166
Query: 419 LAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSA------------------------- 453
A NG +DA +F +MPE N ++ LSA
Sbjct: 167 YAQNGCVDDARSVFDRMPE----KNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSW 222
Query: 454 -CSHSGFLER-----GRQIFRDMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFK 507
C GF+++ RQ F M+ ++ + I A+ G I+EA ++ P +
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVRDVVS---WNTIITGYAQSGKIDEARQLFDESPVQ 279
Query: 508 PNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDR 558
+ F W A++ G + + VE A+E+ ++ E + S MLA + +R
Sbjct: 280 -DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWN--AMLAGYVQGER 327
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 173/579 (29%), Positives = 305/579 (52%), Gaps = 29/579 (5%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHY--PPRI--ALRVFHYLHNPNIFPFNAIIRVLAEQG 104
Q+H I + G + N + L+ Y R+ A +VF + ++ +N+II G
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 275
Query: 105 HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSN 164
S+F + + + T + C S+ VH+ K + + N
Sbjct: 276 LAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCN 335
Query: 165 GLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNL 224
L+ +Y++ ++ A+ VF E+ DRS V+ +TS+I GYA+ G E ++LF M + +
Sbjct: 336 TLLDMYSK-CGDLDSAKAVFREMSDRSVVS-YTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Query: 225 RPQNDTMVSVLSACSSL----EISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFG 280
P T+ +VL+ C+ E ++ W+ N V+ L+ ++
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWI----------KENDLGFDIFVSNALMDMYA 443
Query: 281 KWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHV 340
K G+++++ F + + ++ WN +I Y ++ E LSLF ++++E P+
Sbjct: 444 KCGSMQEAELVFSEMRV---KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDER 500
Query: 341 TMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEV 400
T+ VL ACA + G+ +H Y++ G+ S++ +A SL+DMY+KCG L A +
Sbjct: 501 TVACVLPACASLSAFDKGREIHGYIMRNGY----FSDRHVANSLVDMYAKCGALLLAHML 556
Query: 401 FEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFL 460
F+ SKD+V + MI G ++G G++A+ LF +M + G++ + +F+ L ACSHSG +
Sbjct: 557 FDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLV 616
Query: 461 ERGRQIFRDMSFSTSL--TLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLG 518
+ G + F M + T+EHYAC +D+LAR G + +A + +MP P+ +WGALL
Sbjct: 617 DEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLC 676
Query: 519 GCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQ 578
GC +H V+LA++V++++ E++P ++G YV++AN A +W V LR + ++G++K
Sbjct: 677 GCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKN 736
Query: 579 PGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHM 617
PG SWI + G V+ F+ G S+P+ E I L + M
Sbjct: 737 PGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARM 775
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 126/422 (29%), Positives = 205/422 (48%), Gaps = 26/422 (6%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
A RVF + +N ++ LA+ G S LF + + + +TFS + K
Sbjct: 148 ASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSS 207
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWT 197
+ EQ+H I K G+ SV N LVA Y + R V ARKVFDE+ +R +V W
Sbjct: 208 LRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQR-VDSARKVFDEMTER-DVISWN 265
Query: 198 SLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELI 257
S+I GY +G E+ L +F M+ + T+VSV + C+ + + R V+ +
Sbjct: 266 SIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSI---- 321
Query: 258 DDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDG 317
S D L+ ++ K G+++ ++ F +S R VV + +MI+ Y ++G
Sbjct: 322 --GVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS---DRSVVSYTSMIAGYAREG 376
Query: 318 CPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSN 377
E + LF M +EG + P+ T+ +VL+ CA+ L GK VHE++ + ++G +
Sbjct: 377 LAGEAVKLFEEMEEEGIS-PDVYTVTAVLNCCARYRLLDEGKRVHEWI----KENDLGFD 431
Query: 378 QILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLF-YKMP 436
++ +L+DMY+KCG + A+ VF KD++ +N +I G + N +AL LF +
Sbjct: 432 IFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLE 491
Query: 437 EFGLQPNAGTFLGALSACSHSGFLERGRQI---------FRDMSFSTSLTLEHYACYIDL 487
E P+ T L AC+ ++GR+I F D + SL + C L
Sbjct: 492 EKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALL 551
Query: 488 LA 489
LA
Sbjct: 552 LA 553
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 13/150 (8%)
Query: 301 RGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKW 360
R V N + + + G + L + G + T+ SVL CA L GK
Sbjct: 59 RSVTDANTQLRRFCESGNLENAVKLLCV---SGKWDIDPRTLCSVLQLCADSKSLKDGKE 115
Query: 361 VHEYLISIGHKGN---IGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIM 417
V ++ +GN I SN L + L MY+ CG L A VF+ + + +N ++
Sbjct: 116 VDNFI-----RGNGFVIDSN--LGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMN 168
Query: 418 GLAVNGEGEDALRLFYKMPEFGLQPNAGTF 447
LA +G+ ++ LF KM G++ ++ TF
Sbjct: 169 ELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 282 bits (722), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 204/630 (32%), Positives = 319/630 (50%), Gaps = 60/630 (9%)
Query: 37 LLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGH----YPPRIALRVFHYLH---NPN 89
LL+ R+ Q+ A+I + D +RLI YP + L +L+ NPN
Sbjct: 40 LLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTPNPN 99
Query: 90 IFPFNAIIRVLAEQGHVSHVFSLFNDL-KHRVLAPNDFTFSFLLKVC-FRSKDARCAEQV 147
+F +N +I ++ + F L++ + +HRV +P+ TF +L+K F S+ +Q+
Sbjct: 100 VFVYNTMISAVSSSKN--ECFGLYSSMIRHRV-SPDRQTFLYLMKASSFLSE----VKQI 152
Query: 148 HAHIQKMGYLN-DPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQS 206
H HI G L+ + N LV Y N A KVF +P +V+ + +I GYA+
Sbjct: 153 HCHIIVSGCLSLGNYLWNSLVKFYME-LGNFGVAEKVFARMP-HPDVSSFNVMIVGYAKQ 210
Query: 207 GHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVY--------------F 252
G E L+L+ MV + P T++S+L C L ++ + V+
Sbjct: 211 GFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLI 270
Query: 253 LSELIDD------STSNGESCHDSVN-------TVLVYLFGKWGNVEKSRERFDRISAAG 299
LS + D + + D++ +V F + G++E ++ FD++
Sbjct: 271 LSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMP--- 327
Query: 300 KRGVVPWNAMISAYVQDGCPVEGL-SLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLG 358
KR +V WN+++ Y + GC + LF M +P+ VTMVS++S A G+LS G
Sbjct: 328 KRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHG 387
Query: 359 KWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMG 418
+WVH +I + KG+ L+++LIDMY KCG ++RA VF+ A KDV L+ +MI G
Sbjct: 388 RWVHGLVIRLQLKGD----AFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITG 443
Query: 419 LAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFSTSL 476
LA +G G+ AL+LF +M E G+ PN T L L+ACSHSG +E G +F M F
Sbjct: 444 LAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDP 503
Query: 477 TLEHYACYIDLLARVGCIEEAIEVV-TSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKR 535
EHY +DLL R G +EEA ++V MP +P+ +WG++L C +E A+
Sbjct: 504 ETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTE 563
Query: 536 LVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPG-SSWISVDGVVHEFL 594
L++++P GGYV+L+N A+ +W R M +G+KK G SS + V+G +H F+
Sbjct: 564 LLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEG-LHRFV 622
Query: 595 VG-YLSHPQIEGIYLTLTGLAKHMKAPSHC 623
+HP+ I L L MK C
Sbjct: 623 AAEKQNHPRWTEIKRILQHLYNEMKPKLDC 652
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 192/416 (46%), Gaps = 61/416 (14%)
Query: 33 TFTNLLQGHIPRSHLLQIHARIFQLGAHQ-DNLLATRLIGHYPPR----IALRVFHYLHN 87
TF L++ S + QIH I G N L L+ Y +A +VF + +
Sbjct: 135 TFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPH 194
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
P++ FN +I A+QG L+ + + P+++T LL C D R + V
Sbjct: 195 PDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGV 254
Query: 148 HAHIQKMG--YLNDPSVSNGLVAVY--------------------ARGFRNVVF------ 179
H I++ G Y ++ +SN L+ +Y R + +V
Sbjct: 255 HGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLG 314
Query: 180 ----ARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQ--LFHMMVRQNLRPQNDTMVS 233
A+ VFD++P R V+ W SL+ GY++ G + ++ + M + + ++P TMVS
Sbjct: 315 DMEAAQAVFDQMPKRDLVS-WNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVS 373
Query: 234 VLS-ACSSLEISKIERWVYFLS---ELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSR 289
++S A ++ E+S RWV+ L +L D+ +++ L+ ++ K G +E++
Sbjct: 374 LISGAANNGELSH-GRWVHGLVIRLQLKGDAF---------LSSALIDMYCKCGIIERA- 422
Query: 290 ERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSAC 349
F A ++ V W +MI+ G + L LF M +EG T PN+VT+++VL+AC
Sbjct: 423 --FMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVT-PNNVTLLAVLTAC 479
Query: 350 AQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAV 405
+ G + G V ++ K SL+D+ + GR++ AK++ + +
Sbjct: 480 SHSGLVEEGLHVFNHM---KDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKM 532
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 281 bits (719), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 176/494 (35%), Positives = 271/494 (54%), Gaps = 35/494 (7%)
Query: 145 EQVHAHIQKMGYLNDPSVS--NGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITG 202
+Q+HA + Y +P+ G + + F +V +A +VFD I + S W +LI
Sbjct: 65 KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFM-WNTLIRA 123
Query: 203 YAQS-GHGEEVLQLFH-MMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSE---LI 257
A EE L+ M+ R P T VL AC+ +++ SE +
Sbjct: 124 CAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACA---------YIFGFSEGKQVH 174
Query: 258 DDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDG 317
+G VN L++L+G G ++ +R+ FD + +R +V WN+MI A V+ G
Sbjct: 175 CQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMP---ERSLVSWNSMIDALVRFG 231
Query: 318 CPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSN 377
L LFR M + + P+ TM SVLSACA +G LSLG W H +L+ ++ +
Sbjct: 232 EYDSALQLFREMQR--SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLR-KCDVDVAMD 288
Query: 378 QILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPE 437
++ SLI+MY KCG L A++VF+ +D+ +NAMI+G A +G E+A+ F +M +
Sbjct: 289 VLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVD 348
Query: 438 F--GLQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGC 493
++PN+ TF+G L AC+H GF+ +GRQ F M + LEHY C +DL+AR G
Sbjct: 349 KRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGY 408
Query: 494 IEEAIEVVTSMPFKPNNFVWGALLGGCLLH-SRVELAQEVSKRLV---EVDPTS----SG 545
I EAI++V SMP KP+ +W +LL C + VEL++E+++ ++ E + +S SG
Sbjct: 409 ITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSG 468
Query: 546 GYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEG 605
YV+L+ AS +WNDV +R M E GI+K+PG S I ++G+ HEF G SHPQ +
Sbjct: 469 AYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQ 528
Query: 606 IYLTLTGLAKHMKA 619
IY L + +++
Sbjct: 529 IYQQLKVIDDRLRS 542
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 168/358 (46%), Gaps = 32/358 (8%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLA-EQGHVSHVFSLFNDLKHR-VLAPNDFTFSFLLKVC 135
A RVF + N + F +N +IR A + F L+ + R +P+ TF F+LK C
Sbjct: 102 AFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKAC 161
Query: 136 FRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTC 195
+QVH I K G+ D V+NGL+ +Y + ARKVFDE+P+RS V+
Sbjct: 162 AYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYG-SCGCLDLARKVFDEMPERSLVS- 219
Query: 196 WTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVY-FLS 254
W S+I + G + LQLF M R + P TM SVLSAC+ L + W + FL
Sbjct: 220 WNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLL 278
Query: 255 ELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYV 314
D + +S L+ ++ K G++ + + F + KR + WNAMI +
Sbjct: 279 RKCDVDVAMDVLVKNS----LIEMYCKCGSLRMAEQVFQGMQ---KRDLASWNAMILGFA 331
Query: 315 QDGCPVEGLSLFRIMV-KEGTTRPNHVTMVSVLSACAQIGDLSLGK-----WVHEYLI-- 366
G E ++ F MV K RPN VT V +L AC G ++ G+ V +Y I
Sbjct: 332 THGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEP 391
Query: 367 SIGHKGNIGSNQILATSLIDMYSKCGRLDRAKE-VFEHAVSKDVVLFNAMIMGLAVNG 423
++ H G I +D+ ++ G + A + V + D V++ +++ G
Sbjct: 392 ALEHYGCI----------VDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKG 439
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 281 bits (719), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 177/580 (30%), Positives = 299/580 (51%), Gaps = 26/580 (4%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHY----PPRIALRVFHYLHNPNIFPFNAIIRVLAEQG 104
Q+H + + G+ + + + LI Y P +A +VF + N+ ++A++ G
Sbjct: 27 QVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNG 86
Query: 105 HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSN 164
+ SLF+++ + + PN+FTFS LK C Q+H K+G+ V N
Sbjct: 87 DLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGN 146
Query: 165 GLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNL 224
LV +Y++ R + A KVF I DRS ++ W ++I G+ +G+G + L F MM N+
Sbjct: 147 SLVDMYSKCGR-INEAEKVFRRIVDRSLIS-WNAMIAGFVHAGYGSKALDTFGMMQEANI 204
Query: 225 --RPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDS--VNTVLVYLFG 280
RP T+ S+L ACSS + +Y ++ +G C S + LV L+
Sbjct: 205 KERPDEFTLTSLLKACSSTGM------IYAGKQIHGFLVRSGFHCPSSATITGSLVDLYV 258
Query: 281 KWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHV 340
K G + +R+ FD+I ++ ++ W+++I Y Q+G VE + LF+ ++E ++ +
Sbjct: 259 KCGYLFSARKAFDQIK---EKTMISWSSLILGYAQEGEFVEAMGLFK-RLQELNSQIDSF 314
Query: 341 TMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEV 400
+ S++ A L GK + + + G + S++DMY KCG +D A++
Sbjct: 315 ALSSIIGVFADFALLRQGKQMQALAVKLPS----GLETSVLNSVVDMYLKCGLVDEAEKC 370
Query: 401 FEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFL 460
F KDV+ + +I G +G G+ ++R+FY+M ++P+ +L LSACSHSG +
Sbjct: 371 FAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMI 430
Query: 461 ERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLG 518
+ G ++F + + +EHYAC +DLL R G ++EA ++ +MP KPN +W LL
Sbjct: 431 KEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLS 490
Query: 519 GCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQ 578
C +H +EL +EV K L+ +D + YVM++N WN+ R KG+KK+
Sbjct: 491 LCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKE 550
Query: 579 PGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMK 618
G SW+ ++ VH F G SHP I TL + ++
Sbjct: 551 AGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLR 590
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 189/391 (48%), Gaps = 16/391 (4%)
Query: 131 LLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDR 190
+L+VC R + QVH ++ K G + SN L+ +Y + R + A KVFD +P+R
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCK-CREPLMAYKVFDSMPER 70
Query: 191 SEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWV 250
+ V W++L++G+ +G + L LF M RQ + P T + L AC L + +
Sbjct: 71 N-VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQI 129
Query: 251 YFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMI 310
+ I G V LV ++ K G + ++ + F RI R ++ WNAMI
Sbjct: 130 HGFCLKI------GFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIV---DRSLISWNAMI 180
Query: 311 SAYVQDGCPVEGLSLFRIMVKEG-TTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIG 369
+ +V G + L F +M + RP+ T+ S+L AC+ G + GK +H +L+ G
Sbjct: 181 AGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSG 240
Query: 370 HKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDAL 429
+ S+ + SL+D+Y KCG L A++ F+ K ++ ++++I+G A GE +A+
Sbjct: 241 F--HCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAM 298
Query: 430 RLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQI-FRDMSFSTSLTLEHYACYIDLL 488
LF ++ E Q ++ + + L +G+Q+ + + L +D+
Sbjct: 299 GLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMY 358
Query: 489 ARVGCIEEAIEVVTSMPFKPNNFVWGALLGG 519
+ G ++EA + M K + W ++ G
Sbjct: 359 LKCGLVDEAEKCFAEMQLK-DVISWTVVITG 388
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 90/185 (48%), Gaps = 7/185 (3%)
Query: 337 PNH-VTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLD 395
PN +VS+L C + G G VH YL+ G G N I + LIDMY KC
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGS----GLNLITSNYLIDMYCKCREPL 58
Query: 396 RAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACS 455
A +VF+ ++VV ++A++ G +NG+ + +L LF +M G+ PN TF L AC
Sbjct: 59 MAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACG 118
Query: 456 HSGFLERGRQIFR-DMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWG 514
LE+G QI + + +E +D+ ++ G I EA E V + W
Sbjct: 119 LLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEA-EKVFRRIVDRSLISWN 177
Query: 515 ALLGG 519
A++ G
Sbjct: 178 AMIAG 182
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 193/580 (33%), Positives = 302/580 (52%), Gaps = 49/580 (8%)
Query: 17 LLPFRSSCSIVDHTPTTFTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPPR 76
LL S CS + T L+ + R L+ I+ + LG D + +I H R
Sbjct: 9 LLELISRCSSLRVFKQIQTQLITRDLLRDDLI-INKVVTFLGKSADFASYSSVILH-SIR 66
Query: 77 IALRVFHY--LHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKV 134
L F Y L + + + A + VS+ FS P+ FTF + K
Sbjct: 67 SVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFS-----------PDMFTFPPVFKA 115
Query: 135 CFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYA--RGFRNVVFARKVFDEIPDRSE 192
C + R +Q+H + KMG+ +D V N LV Y RN A KVF E+P R +
Sbjct: 116 CGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRN---ACKVFGEMPVR-D 171
Query: 193 VTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYF 252
V WT +ITG+ ++G +E L F M ++ P T V VL + + + + ++
Sbjct: 172 VVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHG 228
Query: 253 L----SELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNA 308
L + LI T N L+ ++ K + + F + K+ V WN+
Sbjct: 229 LILKRASLISLETGNA----------LIDMYVKCEQLSDAMRVFGELE---KKDKVSWNS 275
Query: 309 MISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISI 368
MIS V E + LF +M +P+ + SVLSACA +G + G+WVHEY+++
Sbjct: 276 MISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTA 335
Query: 369 GHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDA 428
G K + + T+++DMY+KCG ++ A E+F SK+V +NA++ GLA++G G ++
Sbjct: 336 GIKWDTH----IGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLES 391
Query: 429 LRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMS---FSTSLTLEHYACYI 485
LR F +M + G +PN TFL AL+AC H+G ++ GR+ F M ++ LEHY C I
Sbjct: 392 LRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMI 451
Query: 486 DLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLH-SRVELAQEVSKRLVEVDPTSS 544
DLL R G ++EA+E+V +MP KP+ + GA+L C + +EL +E+ ++++ S
Sbjct: 452 DLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDS 511
Query: 545 GGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWI 584
G YV+L+N A++R+W+DV+ +R M+ KGI K PGSS+I
Sbjct: 512 GVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYI 551
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 169/398 (42%), Gaps = 22/398 (5%)
Query: 129 SFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIP 188
S LL++ R R +Q+ + L D + N +V + ++ + I
Sbjct: 7 SVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIR 66
Query: 189 DRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIER 248
+ +L++ YA + + V P T V AC + +
Sbjct: 67 SVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGK 126
Query: 249 WVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNA 308
++ + T G V LV+ +G G + + F + R VV W
Sbjct: 127 QIHGI------VTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPV---RDVVSWTG 177
Query: 309 MISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISI 368
+I+ + + G E L F M E PN T V VL + ++G LSLGK +H ++
Sbjct: 178 IITGFTRTGLYKEALDTFSKMDVE----PNLATYVCVLVSSGRVGCLSLGKGIHGLILK- 232
Query: 369 GHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDA 428
+ ++ S + +LIDMY KC +L A VF KD V +N+MI GL ++A
Sbjct: 233 --RASLISLET-GNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEA 289
Query: 429 LRLFYKM-PEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEHY--ACYI 485
+ LF M G++P+ LSAC+ G ++ GR + + + + + + +
Sbjct: 290 IDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWV-HEYILTAGIKWDTHIGTAIV 348
Query: 486 DLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLH 523
D+ A+ G IE A+E+ + K N F W ALLGG +H
Sbjct: 349 DMYAKCGYIETALEIFNGIRSK-NVFTWNALLGGLAIH 385
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 138/324 (42%), Gaps = 30/324 (9%)
Query: 226 PQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNV 285
P+ ++ ++S CSSL + K + +L+ D +N V+ +L GK +
Sbjct: 4 PEKSVLLELISRCSSLRVFKQIQTQLITRDLLRDDL--------IINKVVTFL-GKSADF 54
Query: 286 EKSRERFDRISAAGKRGVV---PWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTM 342
+ + R V+ +N ++S+Y P + ++ V G + P+ T
Sbjct: 55 AS----YSSVILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFS-PDMFTF 109
Query: 343 VSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFE 402
V AC + + GK +H + +G +I + SL+ Y CG A +VF
Sbjct: 110 PPVFKACGKFSGIREGKQIHGIVTKMGFYDDI----YVQNSLVHFYGVCGESRNACKVFG 165
Query: 403 HAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLER 462
+DVV + +I G G ++AL F KM ++PN T++ L + G L
Sbjct: 166 EMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSL 222
Query: 463 GRQIFRDMSFSTSL-TLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCL 521
G+ I + SL +LE ID+ + + +A+ V + K + W +++ G +
Sbjct: 223 GKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELE-KKDKVSWNSMISGLV 281
Query: 522 LHSRVELAQEVSKRLVEVDPTSSG 545
R + A + L + TSSG
Sbjct: 282 HCERSKEAID----LFSLMQTSSG 301
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 276/545 (50%), Gaps = 19/545 (3%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
A ++F + N +I AEQG + LF+ + P ++ LLK
Sbjct: 137 ADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVN 196
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYAR-GFRNVVFARKVFDEIPDRSEVTCW 196
+ Q+HAH+ + G ++ S+ G+V +Y + G+ +V A++VFD++ + V C
Sbjct: 197 PRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGW--LVGAKRVFDQMAVKKPVAC- 253
Query: 197 TSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSEL 256
T L+ GY Q+G + L+LF +V + + + VL AC+SLE + + ++
Sbjct: 254 TGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAK 313
Query: 257 IDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQD 316
+ G SV T LV + K + E + F I V W+A+IS Y Q
Sbjct: 314 L------GLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPND---VSWSAIISGYCQM 364
Query: 317 GCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGS 376
E + F+ + + + N T S+ AC+ + D ++G VH I + IGS
Sbjct: 365 SQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIK---RSLIGS 421
Query: 377 NQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMP 436
Q ++LI MYSKCG LD A EVFE + D+V + A I G A G +ALRLF KM
Sbjct: 422 -QYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMV 480
Query: 437 EFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCI 494
G++PN+ TF+ L+ACSH+G +E+G+ M ++ + T++HY C ID+ AR G +
Sbjct: 481 SCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLL 540
Query: 495 EEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANAL 554
+EA++ + +MPF+P+ W L GC H +EL + + L ++DP + GYV+ N
Sbjct: 541 DEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLY 600
Query: 555 ASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLA 614
+W + + + M E+ +KK+ SWI G +H F+VG HPQ + IY L
Sbjct: 601 TWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFD 660
Query: 615 KHMKA 619
M+
Sbjct: 661 GFMEG 665
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 148/359 (41%), Gaps = 55/359 (15%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQG 104
QIHA + +LG + + T L+ Y A R F + PN ++AII +
Sbjct: 306 QIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMS 365
Query: 105 HVSHVFSLFNDLKHRVLAP-NDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVS 163
F L+ + + N FT++ + + C D QVHA K +
Sbjct: 366 QFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGE 425
Query: 164 NGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQN 223
+ L+ +Y++ + A +VF+ + D ++ WT+ I+G+A G+ E L+LF MV
Sbjct: 426 SALITMYSK-CGCLDDANEVFESM-DNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCG 483
Query: 224 LRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWG 283
++P + T ++VL+ACS + G+ C D+ + K+
Sbjct: 484 MKPNSVTFIAVLTACSHAGL-----------------VEQGKHCLDT-------MLRKY- 518
Query: 284 NVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMV 343
NV + + +D MI Y + G E L + M E P+ ++
Sbjct: 519 NVAPTIDHYD--------------CMIDIYARSGLLDEALKFMKNMPFE----PDAMSWK 560
Query: 344 SVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFE 402
LS C +L LG+ E L + + G +L ++Y+ G+ + A E+ +
Sbjct: 561 CFLSGCWTHKNLELGEIAGEELRQLDPEDTAG--YVLP---FNLYTWAGKWEEAAEMMK 614
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 179/558 (32%), Positives = 292/558 (52%), Gaps = 44/558 (7%)
Query: 48 LQIHARIFQLGAHQDNLLATRLIGHY----PPRIALRVFHYLHNPNIFPFNAIIRVLAEQ 103
L +H RI + +D + L+ Y +A VF + N ++ +N +I
Sbjct: 137 LVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRN 196
Query: 104 GHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVS 163
G+++ +F+ + + + + T +L VC KD VH +++ + V
Sbjct: 197 GYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVK 256
Query: 164 NGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQN 223
N LV +Y + R + AR VFD + +R +V WT +I GY + G E L+L +M +
Sbjct: 257 NALVNMYLKCGR-MDEARFVFDRM-ERRDVITWTCMINGYTEDGDVENALELCRLMQFEG 314
Query: 224 LRPQNDTMVSVLSAC-SSLEISK--------IERWVYFLSELIDDSTSNGESCHDSVNTV 274
+RP T+ S++S C +L+++ + + VY S++I + T
Sbjct: 315 VRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVY--SDII-------------IETS 359
Query: 275 LVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGT 334
L+ ++ K V+ F S A K PW+A+I+ VQ+ + L LF+ M +E
Sbjct: 360 LISMYAKCKRVDLC---FRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRRE-D 415
Query: 335 TRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRL 394
PN T+ S+L A A + DL +H YL G ++ + AT L+ +YSKCG L
Sbjct: 416 VEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDA----ATGLVHVYSKCGTL 471
Query: 395 DRAKEVF----EHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGA 450
+ A ++F E SKDVVL+ A+I G ++G+G +AL++F +M G+ PN TF A
Sbjct: 472 ESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSA 531
Query: 451 LSACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKP 508
L+ACSHSG +E G +FR M + T HY C +DLL R G ++EA ++T++PF+P
Sbjct: 532 LNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEP 591
Query: 509 NNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRL 568
+ VWGALL C+ H V+L + + +L E++P ++G YV+LAN A+ +W D+ +R
Sbjct: 592 TSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRS 651
Query: 569 EMREKGIKKQPGSSWISV 586
M G++K+PG S I +
Sbjct: 652 MMENVGLRKKPGHSTIEI 669
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 141/506 (27%), Positives = 239/506 (47%), Gaps = 33/506 (6%)
Query: 50 IHARIFQLGAHQDNLLAT-----RLIGHYPPRIALRVFHYLHNPNIFPFNAIIRVLAEQG 104
+H + G ++L+T L GH A ++F + ++ +N +IR+ +G
Sbjct: 37 LHCHVITGGRVSGHILSTLSVTYALCGHIT--YARKLFEEMPQSSLLSYNIVIRMYVREG 94
Query: 105 HVSHVFSLFNDLKHRVL--APNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSV 162
S+F + + P+ +T+ F+ K K + VH I + + D V
Sbjct: 95 LYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYV 154
Query: 163 SNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQ 222
N L+A+Y F V AR VFD + +R +V W ++I+GY ++G+ + L +F MV +
Sbjct: 155 QNALLAMYM-NFGKVEMARDVFDVMKNR-DVISWNTMISGYYRNGYMNDALMMFDWMVNE 212
Query: 223 NLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKW 282
++ + T+VS+L C L+ ++ R V+ L E G+ V LV ++ K
Sbjct: 213 SVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVE----EKRLGDKIE--VKNALVNMYLKC 266
Query: 283 GNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTM 342
G ++++R FDR+ +R V+ W MI+ Y +DG L L R+M EG RPN VT+
Sbjct: 267 GRMDEARFVFDRME---RRDVITWTCMINGYTEDGDVENALELCRLMQFEG-VRPNAVTI 322
Query: 343 VSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFE 402
S++S C ++ GK +H + + + + S+ I+ TSLI MY+KC R+D VF
Sbjct: 323 ASLVSVCGDALKVNDGKCLHGWAV----RQQVYSDIIIETSLISMYAKCKRVDLCFRVFS 378
Query: 403 HAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLER 462
A ++A+I G N DAL LF +M ++PN T L A + L +
Sbjct: 379 GASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQ 438
Query: 463 GRQI---FRDMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFK---PNNFVWGAL 516
I F +S L+ + + ++ G +E A ++ + K + +WGAL
Sbjct: 439 AMNIHCYLTKTGFMSS--LDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGAL 496
Query: 517 LGGCLLHSRVELAQEVSKRLVEVDPT 542
+ G +H A +V +V T
Sbjct: 497 ISGYGMHGDGHNALQVFMEMVRSGVT 522
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 168/578 (29%), Positives = 301/578 (52%), Gaps = 26/578 (4%)
Query: 48 LQIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQ 103
LQ+H + + G + ++ LI Y R A +F ++ +N++I A
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 104 GHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVS 163
G +F ++ + ++ +F+ ++K+C K+ R EQ+H + K G+L D ++
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 164 NGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQN 223
L+ Y++ ++ A ++F EI V WT++I+G+ Q+ EE + LF M R+
Sbjct: 334 TALMVAYSK-CTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392
Query: 224 LRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWG 283
+RP T +L+A + S++ V +N E +V T L+ + K G
Sbjct: 393 VRPNEFTYSVILTALPVISPSEVHAQVV---------KTNYER-SSTVGTALLDAYVKLG 442
Query: 284 NVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMV 343
VE++ + F S + +V W+AM++ Y Q G + +F + K G +PN T
Sbjct: 443 KVEEAAKVF---SGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTK-GGIKPNEFTFS 498
Query: 344 SVLSACAQI-GDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFE 402
S+L+ CA + GK H + I K + S+ ++++L+ MY+K G ++ A+EVF+
Sbjct: 499 SILNVCAATNASMGQGKQFHGFAI----KSRLDSSLCVSSALLTMYAKKGNIESAEEVFK 554
Query: 403 HAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLER 462
KD+V +N+MI G A +G+ AL +F +M + ++ + TF+G +AC+H+G +E
Sbjct: 555 RQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEE 614
Query: 463 GRQIFRDMSFSTSL--TLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGC 520
G + F M + T EH +C +DL +R G +E+A++V+ +MP + +W +L C
Sbjct: 615 GEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAAC 674
Query: 521 LLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPG 580
+H + EL + +++++ + P S YV+L+N A W + + +R M E+ +KK+PG
Sbjct: 675 RVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPG 734
Query: 581 SSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMK 618
SWI V + FL G SHP + IY+ L L+ +K
Sbjct: 735 YSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLK 772
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 149/549 (27%), Positives = 246/549 (44%), Gaps = 44/549 (8%)
Query: 9 TQKFKHCYL----LPFRSSCSIVDHTPTTFTNLLQGHIPRSHLLQIHARIFQLGAHQDNL 64
TQ+ K +L L CSI L R Q+H + + G D
Sbjct: 74 TQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGR----QLHCQCIKFGFLDDVS 129
Query: 65 LATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRV 120
+ T L+ Y + +VF + N+ + +I A V +LF +++
Sbjct: 130 VGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEG 189
Query: 121 LAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFA 180
PN FTF+ L V QVH + K G VSN L+ +Y + NV A
Sbjct: 190 TQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLK-CGNVRKA 248
Query: 181 RKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSS 240
R +FD+ +S VT W S+I+GYA +G E L +F+ M +R + SV+ C++
Sbjct: 249 RILFDKTEVKSVVT-WNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Query: 241 LEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGK 300
L + + F +L G ++ T L+ + K + + F I G
Sbjct: 308 L------KELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVG- 360
Query: 301 RGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKW 360
VV W AMIS ++Q+ E + LF M ++G RPN T +L+A I
Sbjct: 361 -NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG-VRPNEFTYSVILTALPVISPSE---- 414
Query: 361 VHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLA 420
VH ++ K N + + T+L+D Y K G+++ A +VF KD+V ++AM+ G A
Sbjct: 415 VHAQVV----KTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYA 470
Query: 421 VNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHS-GFLERGRQIFRDMSFSTSLTLE 479
GE E A+++F ++ + G++PN TF L+ C+ + + +G+Q F+ L+
Sbjct: 471 QTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFH---GFAIKSRLD 527
Query: 480 HYAC----YIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSR----VELAQE 531
C + + A+ G IE A EV K + W +++ G H + +++ +E
Sbjct: 528 SSLCVSSALLTMYAKKGNIESAEEVFKRQREK-DLVSWNSMISGYAQHGQAMKALDVFKE 586
Query: 532 VSKRLVEVD 540
+ KR V++D
Sbjct: 587 MKKRKVKMD 595
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 205/432 (47%), Gaps = 23/432 (5%)
Query: 100 LAEQGHVSHVFSLFNDLKHRVLAPNDFT-FSFLLKVCFRSKDARCAEQVHAHIQKMGYLN 158
+ G LF ++ HR+ D + FS +LKV D Q+H K G+L+
Sbjct: 68 FSRDGRTQEAKRLFLNI-HRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLD 126
Query: 159 DPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHM 218
D SV LV Y +G N RKVFDE+ +R+ VT WT+LI+GYA++ +EVL LF
Sbjct: 127 DVSVGTSLVDTYMKG-SNFKDGRKVFDEMKERNVVT-WTTLISGYARNSMNDEVLTLFMR 184
Query: 219 MVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYL 278
M + +P + T + L + + V+ + NG V+ L+ L
Sbjct: 185 MQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTV------VVKNGLDKTIPVSNSLINL 238
Query: 279 FGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPN 338
+ K GNV K+R FD+ + VV WN+MIS Y +G +E L +F M + R +
Sbjct: 239 YLKCGNVRKARILFDKTEV---KSVVTWNSMISGYAANGLDLEALGMFYSM-RLNYVRLS 294
Query: 339 HVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAK 398
+ SV+ CA + +L + +H ++ G +Q + T+L+ YSKC + A
Sbjct: 295 ESSFASVIKLCANLKELRFTEQLHCSVVKYG----FLFDQNIRTALMVAYSKCTAMLDAL 350
Query: 399 EVF-EHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHS 457
+F E +VV + AMI G N E+A+ LF +M G++PN T+ L+A
Sbjct: 351 RLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVI 410
Query: 458 GFLERGRQIFRDMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALL 517
E Q+ + ++ S T+ +D ++G +EEA +V + + K + W A+L
Sbjct: 411 SPSEVHAQVVK-TNYERSSTVG--TALLDAYVKLGKVEEAAKVFSGIDDK-DIVAWSAML 466
Query: 518 GGCLLHSRVELA 529
G E A
Sbjct: 467 AGYAQTGETEAA 478
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 182/424 (42%), Gaps = 62/424 (14%)
Query: 163 SNGLVAVYARGFRNVVFAR-----KVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFH 217
+NG+ V F V +R +FD+ P R + + SL+ G+++ G +E +LF
Sbjct: 24 ANGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRES-YISLLFGFSRDGRTQEAKRLFL 82
Query: 218 MMVRQNLRPQNDTMVSVLSACSSLEISKIERWVY---FLSELIDDSTSNGESCHDSVNTV 274
+ R + SVL ++L R ++ +DD SV T
Sbjct: 83 NIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDV---------SVGTS 133
Query: 275 LVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGT 334
LV + K N + R+ FD + +R VV W +IS Y ++ E L+LF M EG
Sbjct: 134 LVDTYMKGSNFKDGRKVFDEMK---ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEG- 189
Query: 335 TRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRL 394
T+PN T + L A+ G G VH ++ G I ++ SLI++Y KCG +
Sbjct: 190 TQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIP----VSNSLINLYLKCGNV 245
Query: 395 DRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSAC 454
+A+ +F+ K VV +N+MI G A NG +AL +FY M ++ + +F + C
Sbjct: 246 RKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLC 305
Query: 455 SHSGFLERGRQI---------FRDMSFSTSLTLEHYACY-----IDLLARVGCI------ 494
++ L Q+ D + T+L + + C + L +GC+
Sbjct: 306 ANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSW 365
Query: 495 -------------EEAIEVVTSMPFK---PNNFVWGALLGGCLLHSRVELAQEVSKRLVE 538
EEA+++ + M K PN F + +L + S E+ +V K E
Sbjct: 366 TAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYE 425
Query: 539 VDPT 542
T
Sbjct: 426 RSST 429
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 181/594 (30%), Positives = 301/594 (50%), Gaps = 38/594 (6%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQG 104
Q+HA + D ++ T + Y + A +F N N +NA+I +++
Sbjct: 302 QLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEE 361
Query: 105 HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSN 164
H LF+ L L ++ + S + + C K Q++ K D V+N
Sbjct: 362 HGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVAN 421
Query: 165 GLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNL 224
+ +Y + + + A +VFDE+ R V+ W ++I + Q+G G E L LF M+R +
Sbjct: 422 AAIDMYGKC-QALAEAFRVFDEMRRRDAVS-WNAIIAAHEQNGKGYETLFLFVSMLRSRI 479
Query: 225 RPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGN 284
P T S+L AC+ + + E+ +G + + SV L+ ++ K G
Sbjct: 480 EPDEFTFGSILKACTGGSLG-------YGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGM 532
Query: 285 VEKSRE----RFDRISAAG-------------KRGVVPWNAMISAYVQDGCPVEGLSLFR 327
+E++ + F R + +G + V WN++IS YV + LF
Sbjct: 533 IEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFT 592
Query: 328 IMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDM 387
M++ G T P+ T +VL CA + LGK +H +I K + S+ + ++L+DM
Sbjct: 593 RMMEMGIT-PDKFTYATVLDTCANLASAGLGKQIHAQVI----KKELQSDVYICSTLVDM 647
Query: 388 YSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTF 447
YSKCG L ++ +FE ++ +D V +NAMI G A +G+GE+A++LF +M ++PN TF
Sbjct: 648 YSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTF 707
Query: 448 LGALSACSHSGFLERGRQIFRDMSFSTSL--TLEHYACYIDLLARVGCIEEAIEVVTSMP 505
+ L AC+H G +++G + F M L L HY+ +D+L + G ++ A+E++ MP
Sbjct: 708 ISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMP 767
Query: 506 FKPNNFVWGALLGGCLLH-SRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVS 564
F+ ++ +W LLG C +H + VE+A+E + L+ +DP S Y +L+N A W VS
Sbjct: 768 FEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVS 827
Query: 565 ALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMK 618
LR MR +KK+PG SW+ + +H FLVG +HP+ E IY L + MK
Sbjct: 828 DLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK 881
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 128/516 (24%), Positives = 238/516 (46%), Gaps = 45/516 (8%)
Query: 48 LQIHARIFQLGAHQDNLLATRLIGHYPPRI----ALRVFHYLHNPNIFPFNAIIRVLAEQ 103
+QIH + ++G D + A+ L+ Y +LRVF + N ++AII +
Sbjct: 200 MQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQN 259
Query: 104 GHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVS 163
+S F +++ + ++ +L+ C + R Q+HAH K + D V
Sbjct: 260 NLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVR 319
Query: 164 NGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQN 223
+ +YA+ N+ A+ +FD + + + + ++ITGY+Q HG + L LFH ++
Sbjct: 320 TATLDMYAKC-DNMQDAQILFDNSENLNRQS-YNAMITGYSQEEHGFKALLLFHRLMSSG 377
Query: 224 LRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWG 283
L ++ V AC+ ++ +Y L + + S V + ++GK
Sbjct: 378 LGFDEISLSGVFRACALVKGLSEGLQIYGL------AIKSSLSLDVCVANAAIDMYGKCQ 431
Query: 284 NVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMV 343
+ ++ FD + +R V WNA+I+A+ Q+G E L LF M++ P+ T
Sbjct: 432 ALAEAFRVFDEMR---RRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR-SRIEPDEFTFG 487
Query: 344 SVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEV--- 400
S+L AC G L G +H ++ K + SN + SLIDMYSKCG ++ A+++
Sbjct: 488 SILKACTG-GSLGYGMEIHSSIV----KSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSR 542
Query: 401 -FEHA----------------VSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPN 443
F+ A + + V +N++I G + + EDA LF +M E G+ P+
Sbjct: 543 FFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPD 602
Query: 444 AGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEHYAC--YIDLLARVGCIEEAIEVV 501
T+ L C++ G+QI + L + Y C +D+ ++ G + ++ ++
Sbjct: 603 KFTYATVLDTCANLASAGLGKQIHAQV-IKKELQSDVYICSTLVDMYSKCGDLHDS-RLM 660
Query: 502 TSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLV 537
+ + W A++ G H + E A ++ +R++
Sbjct: 661 FEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMI 696
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 134/538 (24%), Positives = 241/538 (44%), Gaps = 44/538 (8%)
Query: 31 PTTFT-NLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPPR----IALRVFHYL 85
PTTF N L S + +F +D + ++I Y A F+ +
Sbjct: 81 PTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMM 140
Query: 86 HNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAE 145
++ +N+++ + G +F D+ + + TF+ +LKVC +D
Sbjct: 141 PVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGM 200
Query: 146 QVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQ 205
Q+H + ++G D ++ L+ +YA+G R V + +VF IP+++ V+ W+++I G Q
Sbjct: 201 QIHGIVVRVGCDTDVVAASALLDMYAKGKR-FVESLRVFQGIPEKNSVS-WSAIIAGCVQ 258
Query: 206 SGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGE 265
+ L+ F M + N SVL +C++L ++ ++ L D ++G
Sbjct: 259 NNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLH-AHALKSDFAADG- 316
Query: 266 SCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSL 325
V T + ++ K N++ ++ FD ++ +NAMI+ Y Q+ + L L
Sbjct: 317 ----IVRTATLDMYAKCDNMQDAQILFDNSENLNRQ---SYNAMITGYSQEEHGFKALLL 369
Query: 326 FRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLI 385
F ++ G + +++ V ACA + LS G ++ I K ++ + +A + I
Sbjct: 370 FHRLMSSGLG-FDEISLSGVFRACALVKGLSEGLQIYGLAI----KSSLSLDVCVANAAI 424
Query: 386 DMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAG 445
DMY KC L A VF+ +D V +NA+I NG+G + L LF M ++P+
Sbjct: 425 DMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEF 484
Query: 446 TFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEHYAC-YIDLLARVGCIEEAIEVVTSM 504
TF L AC+ G L G +I + S + C ID+ ++ G IEEA E + S
Sbjct: 485 TFGSILKACT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA-EKIHSR 542
Query: 505 PFKPNN--------------------FVWGALLGGCLLHSRVELAQEVSKRLVEVDPT 542
F+ N W +++ G ++ + E AQ + R++E+ T
Sbjct: 543 FFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGIT 600
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/480 (25%), Positives = 211/480 (43%), Gaps = 64/480 (13%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHV--FSLFNDLKHRVLAPNDFTFSFLLKVC 135
+LR+ H + + FN R L E+ V FS F D ++V + + FSF+ K C
Sbjct: 4 SLRLLHMTRS--VVSFN---RCLTEKISYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKEC 58
Query: 136 FRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRS---- 191
+ +Q HAH+ G+ V N L+ VY R+ V A VFD++P R
Sbjct: 59 AKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNS-RDFVSASMVFDKMPLRDVVSW 117
Query: 192 --------------------------EVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLR 225
+V W S+++GY Q+G + +++F M R+ +
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177
Query: 226 PQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSV--NTVLVYLFGKWG 283
T +L CS LE + + ++ + + C V + L+ ++ K
Sbjct: 178 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRV--------GCDTDVVAASALLDMYAKGK 229
Query: 284 NVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMV 343
+S F I ++ V W+A+I+ VQ+ L F+ M K +
Sbjct: 230 RFVESLRVFQGIP---EKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI-YA 285
Query: 344 SVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEH 403
SVL +CA + +L LG +H + + K + ++ I+ T+ +DMY+KC + A+ +F++
Sbjct: 286 SVLRSCAALSELRLGGQLHAHAL----KSDFAADGIVRTATLDMYAKCDNMQDAQILFDN 341
Query: 404 AVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERG 463
+ + + +NAMI G + G AL LF+++ GL + + G AC+ L G
Sbjct: 342 SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEG 401
Query: 464 RQIFRDMSFSTSLTLEHYACY----IDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGG 519
QI+ ++ +SL+L+ C ID+ + + EA V M + + W A++
Sbjct: 402 LQIY-GLAIKSSLSLD--VCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 280 bits (715), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 175/568 (30%), Positives = 289/568 (50%), Gaps = 52/568 (9%)
Query: 93 FNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQ 152
F I VL Q + L R P T+ L++VC +++ ++VH HI+
Sbjct: 57 FGEAIDVLCGQKLLREAVQLLG----RAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIR 112
Query: 153 KMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRS--------------------- 191
G++ + N L+ +YA+ ++V ARKVFDE+P+R
Sbjct: 113 TSGFVPGIVIWNRLLRMYAK-CGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEAR 171
Query: 192 ----EVT-----CWTSLITGYAQSGHGEEVLQLFHMMVR-QNLRPQNDTMVSVLSACSSL 241
E+T WT+++TGY + EE L L+ +M R N RP ++ + ++
Sbjct: 172 KLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRP------NIFTVSIAV 225
Query: 242 EISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKR 301
+ + + E+ G + + + L+ ++GK G ++++R FD+I ++
Sbjct: 226 AAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIV---EK 282
Query: 302 GVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWV 361
VV W +MI Y + EG SLF +V RPN T VL+ACA + LGK V
Sbjct: 283 DVVSWTSMIDRYFKSSRWREGFSLFSELVG-SCERPNEYTFAGVLNACADLTTEELGKQV 341
Query: 362 HEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAV 421
H Y+ +G ++SL+DMY+KCG ++ AK V + D+V + ++I G A
Sbjct: 342 HGYMTRVG----FDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQ 397
Query: 422 NGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSL--TLE 479
NG+ ++AL+ F + + G +P+ TF+ LSAC+H+G +E+G + F ++ L T +
Sbjct: 398 NGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSD 457
Query: 480 HYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEV 539
HY C +DLLAR G E+ V++ MP KP+ F+W ++LGGC + ++LA+E ++ L ++
Sbjct: 458 HYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKI 517
Query: 540 DPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLS 599
+P + YV +AN A+ +W + +R M+E G+ K+PGSSW + H F+ S
Sbjct: 518 EPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTS 577
Query: 600 HPQIEGIYLTLTGLAKHMKAPSHCQSVS 627
HP I L L K MK + + S
Sbjct: 578 HPMYNQIVEFLRELRKKMKEEGYVPATS 605
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 174/368 (47%), Gaps = 25/368 (6%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRV--LAPNDFTFSFLLKVC 135
A ++F + + + + A++ ++ L++ L RV PN FT S +
Sbjct: 170 ARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYS-LMQRVPNSRPNIFTVSIAVAAA 228
Query: 136 FRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTC 195
K R +++H HI + G +D + + L+ +Y + + AR +FD+I ++ +V
Sbjct: 229 AAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGK-CGCIDEARNIFDKIVEK-DVVS 286
Query: 196 WTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVY-FLS 254
WTS+I Y +S E LF +V RP T VL+AC+ L ++ + V+ +++
Sbjct: 287 WTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMT 346
Query: 255 ELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYV 314
+ D S S LV ++ K GN+E ++ D K +V W ++I
Sbjct: 347 RVGFDPYSFASSS-------LVDMYTKCGNIESAKHVVD---GCPKPDLVSWTSLIGGCA 396
Query: 315 QDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNI 374
Q+G P E L F +++K G T+P+HVT V+VLSAC G + G E+ SI K +
Sbjct: 397 QNGQPDEALKYFDLLLKSG-TKPDHVTFVNVLSACTHAGLVEKG---LEFFYSITEKHRL 452
Query: 375 GSNQILATSLIDMYSKCGRLDRAKEVF-EHAVSKDVVLFNAMIMGLAVNGE----GEDAL 429
T L+D+ ++ GR ++ K V E + L+ +++ G + G E A
Sbjct: 453 SHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQ 512
Query: 430 RLFYKMPE 437
LF PE
Sbjct: 513 ELFKIEPE 520
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 148/328 (45%), Gaps = 38/328 (11%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQG 104
+IH I + G D +L + L+ Y A +F + ++ + ++I +
Sbjct: 239 EIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSS 298
Query: 105 HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSN 164
FSLF++L PN++TF+ +L C +QVH ++ ++G+ S+
Sbjct: 299 RWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASS 358
Query: 165 GLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNL 224
LV +Y + N+ A+ V D P + ++ WTSLI G AQ+G +E L+ F ++++
Sbjct: 359 SLVDMYTK-CGNIESAKHVVDGCP-KPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGT 416
Query: 225 RPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGN 284
+P + T V+VLSAC+ + +E+ + F + + + S H T LV L + G
Sbjct: 417 KPDHVTFVNVLSACTHAGL--VEKGLEFFYSITEKHRLSHTSDH---YTCLVDLLARSG- 470
Query: 285 VEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEG---------LSLFRIMVKEGTT 335
RF+++ + + + + A V GC G LF+I + T
Sbjct: 471 ------RFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVT 524
Query: 336 RPNHVTMVSVLSACAQIGDLSLGKWVHE 363
+VTM ++ +A GKW E
Sbjct: 525 ---YVTMANIYAAA--------GKWEEE 541
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 279 bits (713), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 184/607 (30%), Positives = 300/607 (49%), Gaps = 26/607 (4%)
Query: 23 SCSIVDHTPTTFTNLLQ--GHIPRSHL-LQIHARIFQLGAHQDNLLATRLIGHYPP---- 75
+CSI TF N+++ G + R L IH + + G D ++A+ L+G Y
Sbjct: 99 NCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLF 158
Query: 76 RIALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVC 135
+L+VF + ++ +N +I + G LF ++ PN + + + C
Sbjct: 159 ENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISAC 218
Query: 136 FRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTC 195
R +++H K G+ D V++ LV +Y + + AR+VF ++P +S V
Sbjct: 219 SRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKC-DCLEVAREVFQKMPRKSLVA- 276
Query: 196 WTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSE 255
W S+I GY G + +++ + M+ + RP T+ S+L ACS S+ F+
Sbjct: 277 WNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSR---SRNLLHGKFIHG 333
Query: 256 LIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQ 315
+ S N + VN L+ L+ K G + F S K WN MIS+Y+
Sbjct: 334 YVIRSVVNADI---YVNCSLIDLYFKCGEANLAETVF---SKTQKDVAESWNVMISSYIS 387
Query: 316 DGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIG 375
G + + ++ MV G +P+ VT SVL AC+Q+ L GK +H +SI + +
Sbjct: 388 VGNWFKAVEVYDQMVSVGV-KPDVVTFTSVLPACSQLAALEKGKQIH---LSIS-ESRLE 442
Query: 376 SNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKM 435
++++L ++L+DMYSKCG A +F KDVV + MI +G+ +AL F +M
Sbjct: 443 TDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEM 502
Query: 436 PEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGC 493
+FGL+P+ T L LSAC H+G ++ G + F M + +EHY+C ID+L R G
Sbjct: 503 QKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGR 562
Query: 494 IEEAIEVVTSMPFKPNNF-VWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLAN 552
+ EA E++ P +N + L C LH L +++ LVE P + Y++L N
Sbjct: 563 LLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFN 622
Query: 553 ALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTG 612
AS W+ +RL+M+E G++K+PG SWI + V F SH + E +Y L
Sbjct: 623 LYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLAL 682
Query: 613 LAKHMKA 619
L+ HM++
Sbjct: 683 LSGHMES 689
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 167/338 (49%), Gaps = 17/338 (5%)
Query: 131 LLKVCFRS-KDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPD 189
LL+ C S K R + VH I +G D + L+ VY ++ AR VF+
Sbjct: 9 LLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTC-KDHCSARHVFENFDI 67
Query: 190 RSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNL-RPQNDTMVSVLSACSSLEISKIER 248
RS+V W SL++GY+++ + L++F ++ ++ P + T +V+ A +L + R
Sbjct: 68 RSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGR 127
Query: 249 WVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNA 308
++ L +G C V + LV ++ K+ E S + FD + +R V WN
Sbjct: 128 MIHTL------VVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMP---ERDVASWNT 178
Query: 309 MISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISI 368
+IS + Q G + L LF M G PN V++ +SAC+++ L GK +H +
Sbjct: 179 VISCFYQSGEAEKALELFGRMESSG-FEPNSVSLTVAISACSRLLWLERGKEIHRKCVKK 237
Query: 369 GHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDA 428
G + ++ + ++L+DMY KC L+ A+EVF+ K +V +N+MI G G+ +
Sbjct: 238 GFE----LDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSC 293
Query: 429 LRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQI 466
+ + +M G +P+ T L ACS S L G+ I
Sbjct: 294 VEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFI 331
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 181/532 (34%), Positives = 278/532 (52%), Gaps = 40/532 (7%)
Query: 84 YLHNPN----IFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSK 139
YL P+ IFP N II G + +F H + A N T++ LL SK
Sbjct: 51 YLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVF----HGMRAKNTITWNSLLIGI--SK 104
Query: 140 DARCAEQVHAHIQKMGYLNDPSV--SNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWT 197
D + + AH Q + +P N +++ Y R N A+ FD +P + + W
Sbjct: 105 DP--SRMMEAH-QLFDEIPEPDTFSYNIMLSCYVRNV-NFEKAQSFFDRMPFK-DAASWN 159
Query: 198 SLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELI 257
++ITGYA+ G E+ +LF+ M+ +N N M+S C LE + S
Sbjct: 160 TMITGYARRGEMEKARELFYSMMEKNEVSWN-AMISGYIECGDLEKA---------SHFF 209
Query: 258 DDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDG 317
+ G T ++ + K VE + F ++ + +V WNAMIS YV++
Sbjct: 210 KVAPVRGVVAW----TAMITGYMKAKKVELAEAMFKDMTV--NKNLVTWNAMISGYVENS 263
Query: 318 CPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSN 377
P +GL LFR M++EG RPN + S L C+++ L LG+ +H+ I K + ++
Sbjct: 264 RPEDGLKLFRAMLEEGI-RPNSSGLSSALLGCSELSALQLGRQIHQ----IVSKSTLCND 318
Query: 378 QILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPE 437
TSLI MY KCG L A ++FE KDVV +NAMI G A +G + AL LF +M +
Sbjct: 319 VTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMID 378
Query: 438 FGLQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIE 495
++P+ TF+ L AC+H+G + G F M + +HY C +DLL R G +E
Sbjct: 379 NKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLE 438
Query: 496 EAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALA 555
EA++++ SMPF+P+ V+G LLG C +H VELA+ +++L++++ ++ GYV LAN A
Sbjct: 439 EALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYA 498
Query: 556 SDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIY 607
S +W DV+ +R M+E + K PG SWI + VH F HP+++ I+
Sbjct: 499 SKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIH 550
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 162/516 (31%), Positives = 266/516 (51%), Gaps = 23/516 (4%)
Query: 100 LAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLND 159
L Q + + L+ L + T+S L+K C ++ + H+ G+
Sbjct: 36 LCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPM 95
Query: 160 PSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMM 219
+ N L+ +Y + F + A ++FD++P R+ V WT++I+ Y++ ++ L+L +M
Sbjct: 96 MFLVNVLINMYVK-FNLLNDAHQLFDQMPQRN-VISWTTMISAYSKCKIHQKALELLVLM 153
Query: 220 VRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLF 279
+R N+RP T SVL +C+ + ++ L D V + L+ +F
Sbjct: 154 LRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVF---------VRSALIDVF 204
Query: 280 GKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNH 339
K G E + FD + + WN++I + Q+ L LF+ M + G
Sbjct: 205 AKLGEPEDALSVFDEMVTGD---AIVWNSIIGGFAQNSRSDVALELFKRMKRAGFI-AEQ 260
Query: 340 VTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKE 399
T+ SVL AC + L LG H +++ + IL +L+DMY KCG L+ A
Sbjct: 261 ATLTSVLRACTGLALLELGMQAHVHIVKYDQ------DLILNNALVDMYCKCGSLEDALR 314
Query: 400 VFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGF 459
VF +DV+ ++ MI GLA NG ++AL+LF +M G +PN T +G L ACSH+G
Sbjct: 315 VFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGL 374
Query: 460 LERGRQIFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALL 517
LE G FR M + EHY C IDLL + G +++A++++ M +P+ W LL
Sbjct: 375 LEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Query: 518 GGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKK 577
G C + + LA+ +K+++ +DP +G Y +L+N A+ ++W+ V +R MR++GIKK
Sbjct: 435 GACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKK 494
Query: 578 QPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGL 613
+PG SWI V+ +H F++G SHPQI + L L
Sbjct: 495 EPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQL 530
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 108/226 (47%), Gaps = 9/226 (3%)
Query: 33 TFTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYP----PRIALRVFHYLHNP 88
T++++L+ S + +H I + G D + + LI + P AL VF +
Sbjct: 164 TYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTG 223
Query: 89 NIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVH 148
+ +N+II A+ LF +K T + +L+ C Q H
Sbjct: 224 DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAH 283
Query: 149 AHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGH 208
HI K Y D ++N LV +Y + ++ A +VF+++ +R +T W+++I+G AQ+G+
Sbjct: 284 VHIVK--YDQDLILNNALVDMYCK-CGSLEDALRVFNQMKERDVIT-WSTMISGLAQNGY 339
Query: 209 GEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLS 254
+E L+LF M +P T+V VL ACS + + + W YF S
Sbjct: 340 SQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLE-DGWYYFRS 384
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 156/511 (30%), Positives = 271/511 (53%), Gaps = 21/511 (4%)
Query: 75 PRIALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKV 134
P A F L + ++F + +II LA G + F +F +++++ + P+ S L+
Sbjct: 281 PSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINE 340
Query: 135 CFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVT 194
+ + H + + + D +V N L+++Y + F + A K+F I +
Sbjct: 341 LGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCK-FELLSVAEKLFCRISEEGNKE 399
Query: 195 CWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWV--YF 252
W +++ GY + + ++LF + + + + SV+S+CS + + + + Y
Sbjct: 400 AWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYV 459
Query: 253 LSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISA 312
+ +D + S V L+ L+GK G++ + F V+ WNAMI++
Sbjct: 460 VKTSLDLTIS--------VVNSLIDLYGKMGDLTVAWRMF----CEADTNVITWNAMIAS 507
Query: 313 YVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKG 372
YV + ++LF MV E +P+ +T+V++L AC G L G+ +H Y+ H+
Sbjct: 508 YVHCEQSEKAIALFDRMVSE-NFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEM 566
Query: 373 NIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLF 432
N+ L+ +LIDMY+KCG L++++E+F+ KD V +N MI G ++G+ E A+ LF
Sbjct: 567 NLS----LSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALF 622
Query: 433 YKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM-SFSTSLTLEHYACYIDLLARV 491
+M E ++P TFL LSAC+H+G +E+G+++F M + L+HY+C +DLL+R
Sbjct: 623 DQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRS 682
Query: 492 GCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLA 551
G +EEA V SMPF P+ +WG LL C+ H E+ +++R V DP + G Y+MLA
Sbjct: 683 GNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLA 742
Query: 552 NALASDRQWNDVSALRLEMREKGIKKQPGSS 582
N ++ +W + R MRE G+ K+ G S
Sbjct: 743 NMYSAAGKWEEAERAREMMRESGVGKRAGHS 773
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 122/527 (23%), Positives = 224/527 (42%), Gaps = 32/527 (6%)
Query: 22 SSCSIVDHTPTTFTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYP----PRI 77
SS S VD + L + L + +A I G ++ +A++LI Y P +
Sbjct: 20 SSASYVDRHISVI--LCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNL 77
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
+ RVFH + +IF +N+II+ G + F + +P+ FT ++ C
Sbjct: 78 SSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAE 137
Query: 138 SKDARCAEQVHAHIQKM-GYLNDPSVSNGLVAVYAR-GFRNVVFARKVFDEIPDRSEVTC 195
VH + K G+ + +V V Y++ GF + A VFDE+PDR +V
Sbjct: 138 LLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGF--LQDACLVFDEMPDR-DVVA 194
Query: 196 WTSLITGYAQSGHGEEVLQLF---HMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYF 252
WT++I+G+ Q+G E L H +P T+ ACS+L K R ++
Sbjct: 195 WTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHG 254
Query: 253 LSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISA 312
+ NG + V + + + K GN ++ F + G + W ++I++
Sbjct: 255 F------AVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFREL---GDEDMFSWTSIIAS 305
Query: 313 YVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKG 372
+ G E +F M +G P+ V + +++ ++ + GK H ++I +
Sbjct: 306 LARSGDMEESFDMFWEMQNKG-MHPDGVVISCLINELGKMMLVPQGKAFHGFVI----RH 360
Query: 373 NIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSK-DVVLFNAMIMGLAVNGEGEDALRL 431
+ + SL+ MY K L A+++F + + +N M+ G + L
Sbjct: 361 CFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIEL 420
Query: 432 FYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIF-RDMSFSTSLTLEHYACYIDLLAR 490
F K+ G++ ++ + +S+CSH G + G+ + + S LT+ IDL +
Sbjct: 421 FRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGK 480
Query: 491 VGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLV 537
+G + A + N W A++ + + E A + R+V
Sbjct: 481 MGDLTVAWRMFCEA--DTNVITWNAMIASYVHCEQSEKAIALFDRMV 525
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 118/262 (45%), Gaps = 28/262 (10%)
Query: 219 MVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTS-------------NGE 265
M+R+ L+P +V L SS S ++R + + L D S S G
Sbjct: 1 MLRRLLKPN---LVVTLRKLSSSSASYVDRHISVI--LCDQSLSLESLRKHNALIITGGL 55
Query: 266 SCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSL 325
S + V + L+ + +G S F ++ +R + WN++I A+ +G L
Sbjct: 56 SENIFVASKLISSYASYGKPNLSSRVFHLVT---RRDIFLWNSIIKAHFSNGDYARSLCF 112
Query: 326 FRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLI 385
F M+ G + P+H T V+SACA++ +G +VH ++ G N + S +
Sbjct: 113 FFSMLLSGQS-PDHFTAPMVVSACAELLWFHVGTFVHGLVLK---HGGFDRNTAVGASFV 168
Query: 386 DMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGL---QP 442
YSKCG L A VF+ +DVV + A+I G NGE E L KM G +P
Sbjct: 169 YFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKP 228
Query: 443 NAGTFLGALSACSHSGFLERGR 464
N T ACS+ G L+ GR
Sbjct: 229 NPRTLECGFQACSNLGALKEGR 250
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 169/556 (30%), Positives = 294/556 (52%), Gaps = 32/556 (5%)
Query: 89 NIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVH 148
++ +N ++ L + + ++ + P++FT S +L C + R +++H
Sbjct: 266 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELH 325
Query: 149 AHIQKMGYLNDPS-VSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSG 207
A+ K G L++ S V + LV +Y + V+ R+VFD + DR ++ W ++I GY+Q+
Sbjct: 326 AYALKNGSLDENSFVGSALVDMYC-NCKQVLSGRRVFDGMFDR-KIGLWNAMIAGYSQNE 383
Query: 208 HGEEVLQLF-HMMVRQNLRPQNDTMVSVLSAC-SSLEISKIERWVYFLSELIDDSTSNGE 265
H +E L LF M L + TM V+ AC S S+ E F+ G
Sbjct: 384 HDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV-------VKRGL 436
Query: 266 SCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSL 325
V L+ ++ + G ++ + F ++ R +V WN MI+ YV + L L
Sbjct: 437 DRDRFVQNTLMDMYSRLGKIDIAMRIFGKME---DRDLVTWNTMITGYVFSEHHEDALLL 493
Query: 326 FRIM------VKEGTTR----PNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIG 375
M V +G +R PN +T++++L +CA + L+ GK +H Y I K N+
Sbjct: 494 LHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI----KNNLA 549
Query: 376 SNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKM 435
++ + ++L+DMY+KCG L +++VF+ K+V+ +N +IM ++G G++A+ L M
Sbjct: 550 TDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMM 609
Query: 436 PEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGC 493
G++PN TF+ +ACSHSG ++ G +IF M + + +HYAC +DLL R G
Sbjct: 610 MVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGR 669
Query: 494 IEEAIEVVTSMPFKPNNF-VWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLAN 552
I+EA +++ MP N W +LLG +H+ +E+ + ++ L++++P + YV+LAN
Sbjct: 670 IKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLAN 729
Query: 553 ALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTG 612
+S W+ + +R M+E+G++K+PG SWI VH+F+ G SHPQ E + L
Sbjct: 730 IYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLET 789
Query: 613 LAKHMKAPSHCQSVSC 628
L + M+ + SC
Sbjct: 790 LWERMRKEGYVPDTSC 805
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 129/430 (30%), Positives = 217/430 (50%), Gaps = 32/430 (7%)
Query: 121 LAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGY-LNDPSVSNGLVAVYAR-GFRNVV 178
+ P+++ F LLK +D +Q+HAH+ K GY ++ +V+N LV +Y + G V
Sbjct: 93 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 152
Query: 179 FARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSAC 238
+ KVFD I +R++V+ W SLI+ E L+ F M+ +N+ P + T+VSV++AC
Sbjct: 153 Y--KVFDRISERNQVS-WNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTAC 209
Query: 239 SSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAA 298
S+L + + + ++ GE +NT LV ++GK G + S+ + +
Sbjct: 210 SNLPMPE---GLMMGKQVHAYGLRKGELNSFIINT-LVAMYGKLGKLASSKV---LLGSF 262
Query: 299 GKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLG 358
G R +V WN ++S+ Q+ +E L R MV EG P+ T+ SVL AC+ + L G
Sbjct: 263 GGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG-VEPDEFTISSVLPACSHLEMLRTG 321
Query: 359 KWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMG 418
K +H Y + G++ N + ++L+DMY C ++ + VF+ + + L+NAMI G
Sbjct: 322 KELHAYALK---NGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAG 378
Query: 419 LAVNGEGEDALRLFYKMPE-FGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLT 477
+ N ++AL LF M E GL N+ T G + AC SG R ++ L
Sbjct: 379 YSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR-KEAIHGFVVKRGLD 437
Query: 478 LEHYA--CYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGG-----------CLLHS 524
+ + +D+ +R+G I+ A+ + M + + W ++ G LLH
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMITGYVFSEHHEDALLLLHK 496
Query: 525 RVELAQEVSK 534
L ++VSK
Sbjct: 497 MQNLERKVSK 506
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 131/282 (46%), Gaps = 33/282 (11%)
Query: 196 WTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSL---EISK-IERWVY 251
W L+ +S E + + M+ ++P N ++L A + L E+ K I VY
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 252 FLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMIS 311
+D T V LV L+ K G+ + FDRIS +R V WN++IS
Sbjct: 125 KFGYGVDSVT---------VANTLVNLYRKCGDFGAVYKVFDRIS---ERNQVSWNSLIS 172
Query: 312 AYVQDGCPVE----GLSLFRIMVKEGTTRPNHVTMVSVLSACAQI---GDLSLGKWVHEY 364
+ C E L FR M+ E P+ T+VSV++AC+ + L +GK VH Y
Sbjct: 173 SL----CSFEKWEMALEAFRCMLDE-NVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAY 227
Query: 365 LISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGE 424
+ KG + N + +L+ MY K G+L +K + +D+V +N ++ L N +
Sbjct: 228 GL---RKGEL--NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQ 282
Query: 425 GEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQI 466
+AL +M G++P+ T L ACSH L G+++
Sbjct: 283 LLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 324
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 275 bits (703), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 180/549 (32%), Positives = 290/549 (52%), Gaps = 23/549 (4%)
Query: 80 RVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFND-LKHRVLAPNDFTFSFLLKVCFRS 138
RVF NI +N +I V + + LF + + + + ++ T+
Sbjct: 272 RVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSAL 331
Query: 139 KDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYAR-GFRNVVFARKVFDEIPDRSEVTCWT 197
+ Q H + K + N L+ +Y+R G + F VF + +R +V W
Sbjct: 332 QQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFG--VFLSMRER-DVVSWN 388
Query: 198 SLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELI 257
++I+ + Q+G +E L L + M +Q + T+ ++LSA S+L +I + + LI
Sbjct: 389 TMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAF--LI 446
Query: 258 DDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDG 317
+ +N+ L+ ++ K G + S++ F+ S +R WN+MIS Y Q+G
Sbjct: 447 RQGIQ-----FEGMNSYLIDMYSKSGLIRISQKLFEG-SGYAERDQATWNSMISGYTQNG 500
Query: 318 CPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSN 377
+ +FR M+ E RPN VT+ S+L AC+QIG + LGK +H + I + + N
Sbjct: 501 HTEKTFLVFRKML-EQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSI----RQYLDQN 555
Query: 378 QILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPE 437
+A++L+DMYSK G + A+++F ++ V + MI+G +G GE A+ LF M E
Sbjct: 556 VFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQE 615
Query: 438 FGLQPNAGTFLGALSACSHSGFLERGRQIFRDMS--FSTSLTLEHYACYIDLLARVGCIE 495
G++P+A TF+ LSACS+SG ++ G +IF +M ++ + EHY C D+L RVG +
Sbjct: 616 SGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVN 675
Query: 496 EAIEVVTSMPFKPN-NFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTS--SGGYVMLAN 552
EA E V + + N +WG+LLG C LH +ELA+ VS+RL + D SG V+L+N
Sbjct: 676 EAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSN 735
Query: 553 ALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTG 612
A +++W V +R MREKG+KK+ G S I + G V+ F+ HP IY + G
Sbjct: 736 MYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDG 795
Query: 613 LAKHMKAPS 621
LAK M+ S
Sbjct: 796 LAKDMRGDS 804
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 123/487 (25%), Positives = 220/487 (45%), Gaps = 50/487 (10%)
Query: 75 PRIALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVL---------AP-- 123
P++A ++F + P +N II + + N+L H L AP
Sbjct: 55 PQLARQLFDAIPKPTTVLWNTII-----------IGFICNNLPHEALLFYSRMKKTAPFT 103
Query: 124 --NDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFR------ 175
+ +T+S LK C +K+ + + VH H+ + + V N L+ +Y
Sbjct: 104 NCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFE 163
Query: 176 -NVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSV 234
+VV RKVFD + R V W +LI+ Y ++G E + F +M+R ++P + V+V
Sbjct: 164 YDVV--RKVFDNM-RRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNV 220
Query: 235 LSACS-SLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFD 293
A S S I K + + +L D+ + V + + ++ + G++E SR FD
Sbjct: 221 FPAVSISRSIKKANVFYGLMLKLGDEYVKD-----LFVVSSAISMYAELGDIESSRRVFD 275
Query: 294 RISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIG 353
+ +R + WN MI YVQ+ C VE + LF + + VT + SA + +
Sbjct: 276 ---SCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQ 332
Query: 354 DLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFN 413
+ LG+ H ++ + I ++ SL+ MYS+CG + ++ VF +DVV +N
Sbjct: 333 QVELGRQFHGFVSKNFRELPI----VIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWN 388
Query: 414 AMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFS 473
MI NG ++ L L Y+M + G + + T LSA S+ E G+Q +
Sbjct: 389 TMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFL-IR 447
Query: 474 TSLTLEHYACY-IDLLARVGCIEEAIEVVTSMPF-KPNNFVWGALLGGCLLHSRVELAQE 531
+ E Y ID+ ++ G I + ++ + + + W +++ G + E
Sbjct: 448 QGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFL 507
Query: 532 VSKRLVE 538
V ++++E
Sbjct: 508 VFRKMLE 514
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 275 bits (702), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 139/360 (38%), Positives = 227/360 (63%), Gaps = 11/360 (3%)
Query: 271 VNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMV 330
V L++L+ G+V + + FD++ ++ +V WN++I+ + ++G P E L+L+ M
Sbjct: 25 VQNSLLHLYANCGDVASAYKVFDKMP---EKDLVAWNSVINGFAENGKPEEALALYTEMN 81
Query: 331 KEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSK 390
+G +P+ T+VS+LSACA+IG L+LGK VH Y+I +G N+ S+ +L +D+Y++
Sbjct: 82 SKGI-KPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL----LDLYAR 136
Query: 391 CGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEF-GLQPNAGTFLG 449
CGR++ AK +F+ V K+ V + ++I+GLAVNG G++A+ LF M GL P TF+G
Sbjct: 137 CGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVG 196
Query: 450 ALSACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFK 507
L ACSH G ++ G + FR M + +EH+ C +DLLAR G +++A E + SMP +
Sbjct: 197 ILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQ 256
Query: 508 PNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALR 567
PN +W LLG C +H +LA+ ++++++P SG YV+L+N AS+++W+DV +R
Sbjct: 257 PNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIR 316
Query: 568 LEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMKAPSHCQSVS 627
+M G+KK PG S + V VHEFL+G SHPQ + IY L + +++ + +S
Sbjct: 317 KQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQIS 376
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 153/305 (50%), Gaps = 17/305 (5%)
Query: 140 DARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSL 199
D R E +H+ + + G+ + V N L+ +YA +V A KVFD++P++ ++ W S+
Sbjct: 3 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYA-NCGDVASAYKVFDKMPEK-DLVAWNSV 60
Query: 200 ITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDD 259
I G+A++G EE L L+ M + ++P T+VS+LSAC+ + + + V+ +I
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVY--MIKV 118
Query: 260 STSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCP 319
+ + H S VL+ L+ + G VE+++ FD + + V W ++I +G
Sbjct: 119 GLTR--NLHSS--NVLLDLYARCGRVEEAKTLFDEMV---DKNSVSWTSLIVGLAVNGFG 171
Query: 320 VEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQI 379
E + LF+ M P +T V +L AC+ G + G EY + + I
Sbjct: 172 KEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEG---FEYFRRMREEYKIEPRIE 228
Query: 380 LATSLIDMYSKCGRLDRAKEVFEH-AVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEF 438
++D+ ++ G++ +A E + + +VV++ ++ V+G+ + L F ++
Sbjct: 229 HFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQIL 286
Query: 439 GLQPN 443
L+PN
Sbjct: 287 QLEPN 291
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 129/267 (48%), Gaps = 21/267 (7%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
A +VF + ++ +N++I AE G +L+ ++ + + P+ FT LL C +
Sbjct: 42 AYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAK 101
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWT 197
++VH ++ K+G + SN L+ +YAR R V A+ +FDE+ D++ V+ WT
Sbjct: 102 IGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGR-VEEAKTLFDEMVDKNSVS-WT 159
Query: 198 SLITGYAQSGHGEEVLQLF-HMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSEL 256
SLI G A +G G+E ++LF +M + L P T V +L ACS + K E + YF +
Sbjct: 160 SLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVK-EGFEYF-RRM 217
Query: 257 IDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQD 316
++ H +V L + G V+K+ E S + VV W ++ A
Sbjct: 218 REEYKIEPRIEHFG---CMVDLLARAGQVKKAYEYIK--SMPMQPNVVIWRTLLGA---- 268
Query: 317 GCPVEGLS----LFRIMVKEGTTRPNH 339
C V G S RI + + PNH
Sbjct: 269 -CTVHGDSDLAEFARIQILQ--LEPNH 292
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 91/169 (53%), Gaps = 6/169 (3%)
Query: 352 IGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVL 411
+ D+ LG+ +H +I G GS + SL+ +Y+ CG + A +VF+ KD+V
Sbjct: 1 MADVRLGETIHSVVIRSG----FGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVA 56
Query: 412 FNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM- 470
+N++I G A NG+ E+AL L+ +M G++P+ T + LSAC+ G L G+++ M
Sbjct: 57 WNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 116
Query: 471 SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGG 519
+ L +DL AR G +EEA + M K N+ W +L+ G
Sbjct: 117 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK-NSVSWTSLIVG 164
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 185/616 (30%), Positives = 301/616 (48%), Gaps = 57/616 (9%)
Query: 46 HLLQIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLA 101
H+LQ+HARI DN LA++LI Y R AL VF + N F +NA++
Sbjct: 40 HVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYT 99
Query: 102 EQGHVSHVFSLF------NDLKHRVLAPNDFTFSFLLKVCFRSKD---ARCAEQVHAHIQ 152
+ FSLF + P+ + S +LK D A QVH +
Sbjct: 100 SREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVI 159
Query: 153 KMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEV 212
+ G+ +D V NG++ Y + N+ ARKVFDE+ +R +V W S+I+GY+QSG E+
Sbjct: 160 RGGFDSDVFVGNGMITYYTK-CDNIESARKVFDEMSER-DVVSWNSMISGYSQSGSFEDC 217
Query: 213 LQLFHMMVR-QNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSV 271
+++ M+ + +P T++SV AC + F E+ N S+
Sbjct: 218 KKMYKAMLACSDFKPNGVTVISVFQACGQ------SSDLIFGLEVHKKMIENHIQMDLSL 271
Query: 272 NTVLVYLFGKWGNVEKSRERFDRISAAGKR----------------------------GV 303
++ + K G+++ +R FD +S G+
Sbjct: 272 CNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGL 331
Query: 304 VPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHE 363
WNAMIS +Q+ E ++ FR M++ G +RPN VT+ S+L + +L GK +H
Sbjct: 332 STWNAMISGLMQNNHHEEVINSFREMIRCG-SRPNTVTLSSLLPSLTYSSNLKGGKEIHA 390
Query: 364 YLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNG 423
+ I G NI + TS+ID Y+K G L A+ VF++ + ++ + A+I AV+G
Sbjct: 391 FAIRNGADNNI----YVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHG 446
Query: 424 EGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFSTSLTLEHY 481
+ + A LF +M G +P+ T LSA +HSG + + IF M + +EHY
Sbjct: 447 DSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHY 506
Query: 482 ACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDP 541
AC + +L+R G + +A+E ++ MP P VWGALL G + +E+A+ RL E++P
Sbjct: 507 ACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEP 566
Query: 542 TSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHP 601
++G Y ++AN +W + +R +M+ G+KK PG+SWI + + F+ S
Sbjct: 567 ENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCE 626
Query: 602 QIEGIYLTLTGLAKHM 617
+ + +Y + GL + M
Sbjct: 627 RSKEMYEIIEGLVESM 642
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 167/511 (32%), Positives = 266/511 (52%), Gaps = 33/511 (6%)
Query: 131 LLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDR 190
L+ V K+ +HA I + + D V L+ V + +V +A VF + +
Sbjct: 32 LISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCST-LDSVDYAYDVFSYVSN- 89
Query: 191 SEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWV 250
V +T++I G+ SG + + L+H M+ ++ P N + SVL AC +I V
Sbjct: 90 PNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHAQV 149
Query: 251 YFLS------------ELIDDSTS--NGESCHDSV-------NTVLVYLFGKWGNVEKSR 289
L E+ S N + D + TV++ + + G ++++
Sbjct: 150 LKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEAL 209
Query: 290 ERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSAC 349
E F + + V W AMI V++ + L LFR M E + N T V VLSAC
Sbjct: 210 ELFQDVKI---KDTVCWTAMIDGLVRNKEMNKALELFREMQMENVS-ANEFTAVCVLSAC 265
Query: 350 AQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDV 409
+ +G L LG+WVH ++ + + + +LI+MYS+CG ++ A+ VF KDV
Sbjct: 266 SDLGALELGRWVHSFV----ENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDV 321
Query: 410 VLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRD 469
+ +N MI GLA++G +A+ F M G +PN T + L+ACSH G L+ G ++F
Sbjct: 322 ISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNS 381
Query: 470 MS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVE 527
M F+ +EHY C +DLL RVG +EEA + ++P +P++ + G LL C +H +E
Sbjct: 382 MKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNME 441
Query: 528 LAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVD 587
L ++++KRL E + SG YV+L+N AS +W + + +R MR+ GI+K+PG S I VD
Sbjct: 442 LGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVD 501
Query: 588 GVVHEFLVGYLSHPQIEGIYLTLTGLAKHMK 618
+HEFLVG ++HP E IY L L + ++
Sbjct: 502 NQIHEFLVGDIAHPHKEAIYQRLQELNRILR 532
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 216/473 (45%), Gaps = 54/473 (11%)
Query: 33 TFTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNP 88
T ++L+ +H+ IHA+I + QD + LI A VF Y+ NP
Sbjct: 31 TLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNP 90
Query: 89 NIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVH 148
N++ + A+I G + SL++ + H + P+++ + +LK C D + ++H
Sbjct: 91 NVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIH 146
Query: 149 AHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVT-------------- 194
A + K+G+ + SV ++ +Y + +V A+K+FDE+PDR V
Sbjct: 147 AQVLKLGFGSSRSVGLKMMEIYGKS-GELVNAKKMFDEMPDRDHVAATVMINCYSECGFI 205
Query: 195 ----------------CWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSAC 238
CWT++I G ++ + L+LF M +N+ T V VLSAC
Sbjct: 206 KEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSAC 265
Query: 239 SSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAA 298
S L ++ RWV+ E SN V L+ ++ + G++ ++R F
Sbjct: 266 SDLGALELGRWVHSFVENQRMELSN------FVGNALINMYSRCGDINEARRVF---RVM 316
Query: 299 GKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLG 358
+ V+ +N MIS G VE ++ FR MV G RPN VT+V++L+AC+ G L +G
Sbjct: 317 RDKDVISYNTMISGLAMHGASVEAINEFRDMVNRG-FRPNQVTLVALLNACSHGGLLDIG 375
Query: 359 KWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEH-AVSKDVVLFNAMIM 417
E S+ N+ ++D+ + GRL+ A E+ + D ++ ++
Sbjct: 376 L---EVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLS 432
Query: 418 GLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM 470
++G E ++ ++ E P++GT++ + + SG + +I M
Sbjct: 433 ACKIHGNMELGEKIAKRLFE-SENPDSGTYVLLSNLYASSGKWKESTEIRESM 484
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 185/581 (31%), Positives = 291/581 (50%), Gaps = 24/581 (4%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHYPP--RI--ALRVFHYLHNPNIFPFNAIIRVLAEQG 104
QIHA I + G D L LI Y R+ A ++F+ + N NI + ++ +
Sbjct: 270 QIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNA 329
Query: 105 HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSN 164
LF + L P+ + S +L C QVHA+ K ND V+N
Sbjct: 330 LHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTN 389
Query: 165 GLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHG---EEVLQLFHMMVR 221
L+ +YA+ + ARKVFD I ++V + ++I GY++ G E L +F M
Sbjct: 390 SLIDMYAKC-DCLTDARKVFD-IFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRF 447
Query: 222 QNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGK 281
+ +RP T VS+L A +SL + + ++ L G + + L+ ++
Sbjct: 448 RLIRPSLLTFVSLLRASASLTSLGLSKQIHGLM------FKYGLNLDIFAGSALIDVYSN 501
Query: 282 WGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVT 341
++ SR FD + + +V WN+M + YVQ E L+LF + ++ RP+ T
Sbjct: 502 CYCLKDSRLVFDEMKV---KDLVIWNSMFAGYVQQSENEEALNLF-LELQLSRERPDEFT 557
Query: 342 MVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVF 401
++++A + + LG+ H L+ G + N + +L+DMY+KCG + A + F
Sbjct: 558 FANMVTAAGNLASVQLGQEFHCQLLKRG----LECNPYITNALLDMYAKCGSPEDAHKAF 613
Query: 402 EHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLE 461
+ A S+DVV +N++I A +GEG+ AL++ KM G++PN TF+G LSACSH+G +E
Sbjct: 614 DSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVE 673
Query: 462 RGRQIFRDM-SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGC 520
G + F M F EHY C + LL R G + +A E++ MP KP VW +LL GC
Sbjct: 674 DGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGC 733
Query: 521 LLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPG 580
VELA+ ++ + DP SG + ML+N AS W + +R M+ +G+ K+PG
Sbjct: 734 AKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPG 793
Query: 581 SSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMKAPS 621
SWI ++ VH FL SH + IY L L ++ S
Sbjct: 794 RSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIRGVS 834
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 139/493 (28%), Positives = 233/493 (47%), Gaps = 32/493 (6%)
Query: 50 IHARIFQLGAHQDNLLATRLIGHYPPR----IALRVFHYLHNPNIFPFNAIIRVLAEQGH 105
+H +I G D L+ LI Y A +VF + N+ ++ ++ G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 106 VSHVFSLFNDL-KHRVLAPNDFTFSFLLKVCFRSKDAR---CAEQVHAHIQKMGYLNDPS 161
+F + + R +PN++ S ++ C D R Q+ + + K G+ D
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQAC-SGLDGRGRWMVFQLQSFLVKSGFDRDVY 184
Query: 162 VSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVR 221
V L+ Y + N+ +AR VFD +P++S VT WT++I+G + G LQLF+ ++
Sbjct: 185 VGTLLIDFYLKD-GNIDYARLVFDALPEKSTVT-WTTMISGCVKMGRSYVSLQLFYQLME 242
Query: 222 QNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGK 281
N+ P + +VLSACS L + + ++ G S+ VL+ + K
Sbjct: 243 DNVVPDGYILSTVLSACSILPFLEGGKQIH------AHILRYGLEMDASLMNVLIDSYVK 296
Query: 282 WGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVT 341
G V + + F+ + + ++ W ++S Y Q+ E + LF M K G +P+
Sbjct: 297 CGRVIAAHKLFNGMP---NKNIISWTTLLSGYKQNALHKEAMELFTSMSKFG-LKPDMYA 352
Query: 342 MVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVF 401
S+L++CA + L G VH Y I K N+G++ + SLIDMY+KC L A++VF
Sbjct: 353 CSSILTSCASLHALGFGTQVHAYTI----KANLGNDSYVTNSLIDMYAKCDCLTDARKVF 408
Query: 402 EHAVSKDVVLFNAMIMG---LAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSG 458
+ + DVVLFNAMI G L E +AL +F M ++P+ TF+ L A +
Sbjct: 409 DIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLT 468
Query: 459 FLERGRQIFRDMSFSTSLTLEHYA--CYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGAL 516
L +QI + F L L+ +A ID+ + C++++ V M K + +W ++
Sbjct: 469 SLGLSKQI-HGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSM 526
Query: 517 LGGCLLHSRVELA 529
G + S E A
Sbjct: 527 FAGYVQQSENEEA 539
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 162/495 (32%), Positives = 266/495 (53%), Gaps = 19/495 (3%)
Query: 114 NDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARG 173
NDL+ + + ++ LLK C K VHAHI + + +D + N L+ +YA+
Sbjct: 49 NDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAK- 107
Query: 174 FRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVS 233
++ ARKVF+++P R VT WT+LI+GY+Q + L F+ M+R P T+ S
Sbjct: 108 CGSLEEARKVFEKMPQRDFVT-WTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSS 166
Query: 234 VLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFD 293
V+ A ++ ER +L G + V + L+ L+ ++G ++ ++ FD
Sbjct: 167 VIKAAAA------ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFD 220
Query: 294 RISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIG 353
+ + R V WNA+I+ + + + L LF+ M+++G RP+H + S+ AC+ G
Sbjct: 221 ALES---RNDVSWNALIAGHARRSGTEKALELFQGMLRDGF-RPSHFSYASLFGACSSTG 276
Query: 354 DLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFN 413
L GKWVH Y+I G K +L+DMY+K G + A+++F+ +DVV +N
Sbjct: 277 FLEQGKWVHAYMIKSGEK----LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWN 332
Query: 414 AMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFS 473
+++ A +G G++A+ F +M G++PN +FL L+ACSHSG L+ G + M
Sbjct: 333 SLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMK-K 391
Query: 474 TSLTLE--HYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQE 531
+ E HY +DLL R G + A+ + MP +P +W ALL C +H EL
Sbjct: 392 DGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAY 451
Query: 532 VSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVH 591
++ + E+DP G +V+L N AS +WND + +R +M+E G+KK+P SW+ ++ +H
Sbjct: 452 AAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIH 511
Query: 592 EFLVGYLSHPQIEGI 606
F+ HPQ E I
Sbjct: 512 MFVANDERHPQREEI 526
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 179/375 (47%), Gaps = 27/375 (7%)
Query: 32 TTFTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHN 87
T F L+QG I +H+LQ IF+ D ++ L+ Y A +VF +
Sbjct: 71 TVFKLLIQGRIVHAHILQ---SIFR----HDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
+ + +I ++ FN + +PN+FT S ++K + C Q+
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183
Query: 148 HAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSG 207
H K G+ ++ V + L+ +Y R + + A+ VFD + R++V+ W +LI G+A+
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTR-YGLMDDAQLVFDALESRNDVS-WNALIAGHARRS 241
Query: 208 HGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESC 267
E+ L+LF M+R RP + + S+ ACSS + +WV+ +GE
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAY------MIKSGEKL 295
Query: 268 HDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFR 327
L+ ++ K G++ +R+ FDR++ KR VV WN++++AY Q G E + F
Sbjct: 296 VAFAGNTLLDMYAKSGSIHDARKIFDRLA---KRDVVSWNSLLTAYAQHGFGKEAVWWFE 352
Query: 328 IMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDM 387
M + G RPN ++ +SVL+AC+ G L G +E + K I +++D+
Sbjct: 353 EMRRVG-IRPNEISFLSVLTACSHSGLLDEGWHYYELM----KKDGIVPEAWHYVTVVDL 407
Query: 388 YSKCGRLDRAKEVFE 402
+ G L+RA E
Sbjct: 408 LGRAGDLNRALRFIE 422
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 177/546 (32%), Positives = 281/546 (51%), Gaps = 21/546 (3%)
Query: 75 PRIALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLF-NDLKHRVLAPNDFTFSFLLK 133
P A RVF + + +N +I + V +F +L P+ T S +L+
Sbjct: 258 PTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ--FKPDLLTVSSVLR 315
Query: 134 VCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEV 193
C +D A+ ++ ++ K G++ + +V N L+ VYA+ +++ AR VF+ + + V
Sbjct: 316 ACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKC-GDMITARDVFNSMECKDTV 374
Query: 194 TCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFL 253
+ W S+I+GY QSG E ++LF MM+ + + T + ++S + L K F
Sbjct: 375 S-WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLK------FG 427
Query: 254 SELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAY 313
L + +G SV+ L+ ++ K G V S + F S+ G V WN +ISA
Sbjct: 428 KGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIF---SSMGTGDTVTWNTVISAC 484
Query: 314 VQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGN 373
V+ G GL + M K P+ T + L CA + LGK +H L+ G++
Sbjct: 485 VRFGDFATGLQVTTQMRKSEVV-PDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESE 543
Query: 374 IGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFY 433
+ + +LI+MYSKCG L+ + VFE +DVV + MI + GEGE AL F
Sbjct: 544 LQ----IGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFA 599
Query: 434 KMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMS--FSTSLTLEHYACYIDLLARV 491
M + G+ P++ F+ + ACSHSG ++ G F M + +EHYAC +DLL+R
Sbjct: 600 DMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRS 659
Query: 492 GCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLA 551
I +A E + +MP KP+ +W ++L C +E A+ VS+R++E++P G ++ +
Sbjct: 660 QKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILAS 719
Query: 552 NALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLT 611
NA A+ R+W+ VS +R +++K I K PG SWI V VH F G S PQ E IY +L
Sbjct: 720 NAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLE 779
Query: 612 GLAKHM 617
L M
Sbjct: 780 ILYSLM 785
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 134/483 (27%), Positives = 241/483 (49%), Gaps = 24/483 (4%)
Query: 45 SHLLQIHARIFQLGAHQDNLLATRLIGHYP----PRIALRVFHYLH-NPNIFPFNAIIRV 99
+ L +IHA + LG + + +LI Y P +L VF + N++ +N+IIR
Sbjct: 21 NELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRA 80
Query: 100 LAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLND 159
++ G + L+ ++P+ +TF ++K C DA + V+ I MG+ +D
Sbjct: 81 FSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESD 140
Query: 160 PSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMM 219
V N LV +Y+R + AR+VFDE+P R V+ W SLI+GY+ G+ EE L+++H +
Sbjct: 141 LFVGNALVDMYSR-MGLLTRARQVFDEMPVRDLVS-WNSLISGYSSHGYYEEALEIYHEL 198
Query: 220 VRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLF 279
+ P + T+ SVL A +L + K + ++ + +G + VN LV ++
Sbjct: 199 KNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGF------ALKSGVNSVVVVNNGLVAMY 252
Query: 280 GKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNH 339
K+ +R FD + R V +N MI Y++ E + +F + +P+
Sbjct: 253 LKFRRPTDARRVFDEMDV---RDSVSYNTMICGYLKLEMVEESVRMF--LENLDQFKPDL 307
Query: 340 VTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKE 399
+T+ SVL AC + DLSL K+++ Y++ G I LID+Y+KCG + A++
Sbjct: 308 LTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNI----LIDVYAKCGDMITARD 363
Query: 400 VFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGF 459
VF KD V +N++I G +G+ +A++LF M Q + T+L +S +
Sbjct: 364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLAD 423
Query: 460 LERGRQIFRD-MSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLG 518
L+ G+ + + + + L ID+ A+ G + +++++ +SM + W ++
Sbjct: 424 LKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNTVIS 482
Query: 519 GCL 521
C+
Sbjct: 483 ACV 485
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 182/588 (30%), Positives = 295/588 (50%), Gaps = 46/588 (7%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHY----PPRIALRVFHYLHNPNIFPFNAIIRVLAEQG 104
Q+HA++ +L + + LI Y A RVF+ + ++ +++II ++ G
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 105 HVSHVFSLFND-LKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVS 163
S + L V PN++ F LK C Q+H K +
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAG 308
Query: 164 NGLVAVYAR-GFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQ 222
L +YAR GF N AR+VFD+I +R + W +I G A +G+ +E + +F M
Sbjct: 309 CSLCDMYARCGFLNS--ARRVFDQI-ERPDTASWNVIIAGLANNGYADEAVSVFSQMRSS 365
Query: 223 NLRPQNDTMVSVLSA-------CSSLEI-SKIERWVYFLSELIDDSTSNGESCHDSVNTV 274
P ++ S+L A ++I S I +W FL++L + +S+ T+
Sbjct: 366 GFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKW-GFLADL---------TVCNSLLTM 415
Query: 275 LVY---LFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVK 331
+ L+ + E R D +S WN +++A +Q PVE L LF++M+
Sbjct: 416 YTFCSDLYCCFNLFEDFRNNADSVS---------WNTILTACLQHEQPVEMLRLFKLMLV 466
Query: 332 EGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKC 391
P+H+TM ++L C +I L LG VH Y + G + Q + LIDMY+KC
Sbjct: 467 -SECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTG----LAPEQFIKNGLIDMYAKC 521
Query: 392 GRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGAL 451
G L +A+ +F+ ++DVV ++ +I+G A +G GE+AL LF +M G++PN TF+G L
Sbjct: 522 GSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVL 581
Query: 452 SACSHSGFLERGRQIFRDMSFS--TSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPN 509
+ACSH G +E G +++ M S T EH +C +DLLAR G + EA + M +P+
Sbjct: 582 TACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPD 641
Query: 510 NFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLE 569
VW LL C V LAQ+ ++ ++++DP +S +V+L + AS W + + LR
Sbjct: 642 VVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSS 701
Query: 570 MREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHM 617
M++ +KK PG SWI ++ +H F + HP+ + IY L + M
Sbjct: 702 MKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQM 749
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/482 (25%), Positives = 208/482 (43%), Gaps = 32/482 (6%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQG 104
+IH I D +L ++ Y R A VF ++ N+ + ++I ++ G
Sbjct: 88 KIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNG 147
Query: 105 HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSN 164
+ L+ + L P+ F F ++K C S D +Q+HA + K+ + N
Sbjct: 148 QGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQN 207
Query: 165 GLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVL-QLFHMMVRQN 223
L+A+Y R F + A +VF IP + ++ W+S+I G++Q G E L L M+
Sbjct: 208 ALIAMYVR-FNQMSDASRVFYGIPMKDLIS-WSSIIAGFSQLGFEFEALSHLKEMLSFGV 265
Query: 224 LRPQNDTMVSVLSACSSLEISKIERWVYFL---SELIDDSTSNGESCHDSVNTVLVYLFG 280
P S L ACSSL ++ L SEL ++ + C ++
Sbjct: 266 FHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCD---------MYA 316
Query: 281 KWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHV 340
+ G + +R FD+I + WN +I+ +G E +S+F M G P+ +
Sbjct: 317 RCGFLNSARRVFDQIE---RPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFI-PDAI 372
Query: 341 TMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEV 400
++ S+L A + LS G +H Y+I G ++ + SL+ MY+ C L +
Sbjct: 373 SLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADL----TVCNSLLTMYTFCSDLYCCFNL 428
Query: 401 FEH-AVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGF 459
FE + D V +N ++ + + + LRLF M +P+ T L C
Sbjct: 429 FEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISS 488
Query: 460 LERGRQIFRDMSFSTSLTLEHYA--CYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALL 517
L+ G Q+ S T L E + ID+ A+ G + +A + SM + + W L+
Sbjct: 489 LKLGSQV-HCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNR-DVVSWSTLI 546
Query: 518 GG 519
G
Sbjct: 547 VG 548
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 100/200 (50%), Gaps = 6/200 (3%)
Query: 321 EGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQIL 380
E L F K + + T +S++ AC+ L+ G+ +H+++++ N + IL
Sbjct: 49 EALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILN----SNCKYDTIL 104
Query: 381 ATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGL 440
++ MY KCG L A+EVF+ +++V + ++I G + NG+G +A+RL+ KM + L
Sbjct: 105 NNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDL 164
Query: 441 QPNAGTFLGALSACSHSGFLERGRQIFRD-MSFSTSLTLEHYACYIDLLARVGCIEEAIE 499
P+ F + AC+ S + G+Q+ + +S L I + R + +A
Sbjct: 165 VPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASR 224
Query: 500 VVTSMPFKPNNFVWGALLGG 519
V +P K + W +++ G
Sbjct: 225 VFYGIPMK-DLISWSSIIAG 243
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 170/548 (31%), Positives = 290/548 (52%), Gaps = 29/548 (5%)
Query: 50 IHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQGH 105
IH+ + D + T L+ Y +A++VF + ++ +NA+I +
Sbjct: 125 IHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCC 184
Query: 106 VSHVFSLFNDLKHRV--LAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVS 163
++ V LF D++ R+ L+PN T + R+ R + VH + +MG+ ND V
Sbjct: 185 LTDVIGLFLDMR-RIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVK 243
Query: 164 NGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLF-HMMVRQ 222
G++ VYA+ + +++AR+VFD ++EVT W+++I GY ++ +E ++F M+V
Sbjct: 244 TGILDVYAKS-KCIIYARRVFDLDFKKNEVT-WSAMIGGYVENEMIKEAGEVFFQMLVND 301
Query: 223 NLRPQNDTMVS-VLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGK 281
N+ + +L C+ R V+ + G +V ++ + K
Sbjct: 302 NVAMVTPVAIGLILMGCARFGDLSGGRCVHCYA------VKAGFILDLTVQNTIISFYAK 355
Query: 282 WGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVT 341
+G++ + +F I G + V+ +N++I+ V + P E LF M G RP+ T
Sbjct: 356 YGSLCDAFRQFSEI---GLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGI-RPDITT 411
Query: 342 MVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVF 401
++ VL+AC+ + L G H Y + G+ N + +L+DMY+KCG+LD AK VF
Sbjct: 412 LLGVLTACSHLAALGHGSSCHGYCVVHGY----AVNTSICNALMDMYTKCGKLDVAKRVF 467
Query: 402 EHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLE 461
+ +D+V +N M+ G ++G G++AL LF M E G+ P+ T L LSACSHSG ++
Sbjct: 468 DTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVD 527
Query: 462 RGRQIFRDMS---FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLG 518
G+Q+F MS F+ ++HY C DLLAR G ++EA + V MPF+P+ V G LL
Sbjct: 528 EGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLS 587
Query: 519 GCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQ 578
C + EL EVSK++ + T+ V+L+N ++ +W D + +R+ +++G+ K
Sbjct: 588 ACWTYKNAELGNEVSKKMQSLGETTE-SLVLLSNTYSAAERWEDAARIRMIQKKRGLLKT 646
Query: 579 PGSSWISV 586
PG SW+ V
Sbjct: 647 PGYSWVDV 654
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 136/498 (27%), Positives = 225/498 (45%), Gaps = 33/498 (6%)
Query: 36 NLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPP-RIALRVFHYLHNPNIFP-- 92
NL+ G + HLL+ R L + + TRL +A VF + +P I P
Sbjct: 14 NLVLGQVIHQHLLK---RSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIA 70
Query: 93 FNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQ 152
++ +IR A L+ + + + P +T+ F+LK C + + +H+H+
Sbjct: 71 WDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVN 130
Query: 153 KMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEV 212
+ D V LV YA+ + A KVFDE+P R V W ++I+G++ +V
Sbjct: 131 CSDFATDMYVCTALVDFYAK-CGELEMAIKVFDEMPKRDMVA-WNAMISGFSLHCCLTDV 188
Query: 213 LQLFHMMVR-QNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSV 271
+ LF M R L P T+V + A + + V+ T G S V
Sbjct: 189 IGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGY------CTRMGFSNDLVV 242
Query: 272 NTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVE-GLSLFRIMV 330
T ++ ++ K + +R FD K+ V W+AMI YV++ E G F+++V
Sbjct: 243 KTGILDVYAKSKCIIYARRVFD---LDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLV 299
Query: 331 KEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSK 390
+ V + +L CA+ GDLS G+ VH Y + G ++ + ++I Y+K
Sbjct: 300 NDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDL----TVQNTIISFYAK 355
Query: 391 CGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGA 450
G L A F KDV+ +N++I G VN E++ RLF++M G++P+ T LG
Sbjct: 356 YGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGV 415
Query: 451 LSACSHSGFLERGRQ-----IFRDMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMP 505
L+ACSH L G + + +TS+ +D+ + G ++ A V +M
Sbjct: 416 LTACSHLAALGHGSSCHGYCVVHGYAVNTSIC----NALMDMYTKCGKLDVAKRVFDTM- 470
Query: 506 FKPNNFVWGALLGGCLLH 523
K + W +L G +H
Sbjct: 471 HKRDIVSWNTMLFGFGIH 488
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 201/442 (45%), Gaps = 32/442 (7%)
Query: 128 FSFLLKVCFRSKDARCAEQVHAHIQKMGY-LNDPSVSNGLVAVYARGFRNVVFARKVFDE 186
F LL+ C RS++ + +H H+ K L+ +V L +YA V AR VFDE
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYA-SCNEVELARHVFDE 60
Query: 187 IP-DRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISK 245
IP R W +I YA + E+ L L++ M+ +RP T VL AC+ L
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120
Query: 246 IERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVP 305
+ ++ D +T V T LV + K G +E + + FD + KR +V
Sbjct: 121 DGKLIHSHVNCSDFATDM------YVCTALVDFYAKCGELEMAIKVFDEMP---KRDMVA 171
Query: 306 WNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYL 365
WNAMIS + C + + LF M + PN T+V + A + G L GK VH Y
Sbjct: 172 WNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYC 231
Query: 366 ISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEG 425
+G ++ ++ T ++D+Y+K + A+ VF+ K+ V ++AMI G N
Sbjct: 232 TRMGFSNDL----VVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMI 287
Query: 426 EDALRLFYKM----PEFGLQPNAGTFLGALSACSHSGFLERGRQIF---RDMSFSTSLTL 478
++A +F++M + P A + L C+ G L GR + F LT+
Sbjct: 288 KEAGEVFFQMLVNDNVAMVTPVAIGLI--LMGCARFGDLSGGRCVHCYAVKAGFILDLTV 345
Query: 479 EHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVE----LAQEVSK 534
++ I A+ G + +A + + K + + +L+ GC+++ R E L E+
Sbjct: 346 QN--TIISFYAKYGSLCDAFRQFSEIGLK-DVISYNSLITGCVVNCRPEESFRLFHEMRT 402
Query: 535 RLVEVDPTSSGGYVMLANALAS 556
+ D T+ G + + LA+
Sbjct: 403 SGIRPDITTLLGVLTACSHLAA 424
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 166/551 (30%), Positives = 285/551 (51%), Gaps = 60/551 (10%)
Query: 77 IALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCF 136
+A+ + PN+F +NA+ + H L+ + ++P+ +T+S L+K
Sbjct: 823 LAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKAS- 881
Query: 137 RSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCW 196
S +R E + AHI K G+ + L+ Y+ R + ARKVFDE+P+R ++ W
Sbjct: 882 -SFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGR-IREARKVFDEMPERDDI-AW 938
Query: 197 TSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSEL 256
T++++ Y + + L + M +N
Sbjct: 939 TTMVSAYRRVLDMDSANSLANQMSEKN--------------------------------- 965
Query: 257 IDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQD 316
++TSN L+ + GN+E++ F+++ + ++ W MI Y Q+
Sbjct: 966 --EATSN----------CLINGYMGLGNLEQAESLFNQMPV---KDIISWTTMIKGYSQN 1010
Query: 317 GCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGS 376
E +++F M++EG P+ VTM +V+SACA +G L +GK VH Y + G ++
Sbjct: 1011 KRYREAIAVFYKMMEEGII-PDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDV-- 1067
Query: 377 NQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMP 436
+ ++L+DMYSKCG L+RA VF + K++ +N++I GLA +G ++AL++F KM
Sbjct: 1068 --YIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKME 1125
Query: 437 EFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCI 494
++PNA TF+ +AC+H+G ++ GR+I+R M +S +EHY + L ++ G I
Sbjct: 1126 MESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLI 1185
Query: 495 EEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANAL 554
EA+E++ +M F+PN +WGALL GC +H + +A+ +L+ ++P +SG Y +L +
Sbjct: 1186 YEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMY 1245
Query: 555 ASDRQWNDVSALRLEMREKGIKKQ-PGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGL 613
A +W DV+ +R MRE GI+K PG+S I +D H F SH + + L L +
Sbjct: 1246 AEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEI 1305
Query: 614 AKHMKAPSHCQ 624
M + Q
Sbjct: 1306 YDQMGLAGYVQ 1316
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 179/577 (31%), Positives = 297/577 (51%), Gaps = 73/577 (12%)
Query: 75 PRIALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKV 134
PR A ++F + + NI +N ++ + G + +F+ + R N +++ L+K
Sbjct: 64 PRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPER----NVVSWTALVKG 119
Query: 135 CFRSKDARCAE----------QVHAHIQKMGYLND-------------PSVSNGLVAVYA 171
+ AE +V + +G+L D P N
Sbjct: 120 YVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMI 179
Query: 172 RGF---RNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQN 228
G V AR++FDE+ +RS +T WT+++TGY Q+ ++ ++F +M P+
Sbjct: 180 HGLCKEGRVDEAREIFDEMSERSVIT-WTTMVTGYGQNNRVDDARKIFDVM------PEK 232
Query: 229 DTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGE--------SCHDSVNTVLVYLFG 280
T VS S Y + I+D+ E +C+ ++ G
Sbjct: 233 -TEVSWTSMLMG----------YVQNGRIEDAEELFEVMPVKPVIACN-----AMISGLG 276
Query: 281 KWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHV 340
+ G + K+R FD + +R W +I + ++G +E L LF +M K+G RP
Sbjct: 277 QKGEIAKARRVFDSMK---ERNDASWQTVIKIHERNGFELEALDLFILMQKQGV-RPTFP 332
Query: 341 TMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEV 400
T++S+LS CA + L GK VH L+ + + +A+ L+ MY KCG L ++K +
Sbjct: 333 TLISILSVCASLASLHHGKQVHAQLV----RCQFDVDVYVASVLMTMYIKCGELVKSKLI 388
Query: 401 FEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFG-LQPNAGTFLGALSACSHSGF 459
F+ SKD++++N++I G A +G GE+AL++F +MP G +PN TF+ LSACS++G
Sbjct: 389 FDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 448
Query: 460 LERGRQIFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALL 517
+E G +I+ M F HYAC +D+L R G EA+E++ SM +P+ VWG+LL
Sbjct: 449 VEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL 508
Query: 518 GGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKK 577
G C HS++++A+ +K+L+E++P +SG Y++L+N AS +W DV+ LR M+ + ++K
Sbjct: 509 GACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRK 568
Query: 578 QPGSSWISVDGVVHEFLVGYL-SHPQIEGIYLTLTGL 613
PG SW V+ VH F G + SHP+ E I L L
Sbjct: 569 SPGCSWTEVENKVHAFTRGGINSHPEQESILKILDEL 605
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 122/518 (23%), Positives = 214/518 (41%), Gaps = 93/518 (17%)
Query: 164 NGLVAVYARGFRNVV--FARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVR 221
N +VA Y F N++ ARK+FDE+PDR+ + W L++GY ++G +E ++F +M
Sbjct: 52 NSMVAGY---FANLMPRDARKLFDEMPDRN-IISWNGLVSGYMKNGEIDEARKVFDLMPE 107
Query: 222 QNLRPQNDTMVSVL-----SACSSL-----EISKIERWVYFLSEL----IDDSTSNGESC 267
+N+ + + SL E +K+ V + L IDD+ E
Sbjct: 108 RNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMI 167
Query: 268 HDSVN---TVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLS 324
D N T +++ K G V+++RE FD +S +R V+ W M++ Y Q+ +
Sbjct: 168 PDKDNIARTSMIHGLCKEGRVDEAREIFDEMS---ERSVITWTTMVTGYGQNNRVDDARK 224
Query: 325 LFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSL 384
+F +M ++ V+ S+L Q G + + + E + K I N ++
Sbjct: 225 IFDVMPEK-----TEVSWTSMLMGYVQNGRIEDAEELFEVMPV---KPVIACN-----AM 271
Query: 385 IDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNA 444
I + G + +A+ VF+ ++ + +I NG +AL LF M + G++P
Sbjct: 272 ISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTF 331
Query: 445 GTFLGALSACSHSGFLERGRQIFR---------DMSFSTSLTLEHYAC------------ 483
T + LS C+ L G+Q+ D+ ++ L + C
Sbjct: 332 PTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDR 391
Query: 484 -----------YIDLLARVGCIEEAIEVVTSMPF----KPNNFVWGALLGGCLLHSRVEL 528
I A G EEA++V MP KPN + A L C VE
Sbjct: 392 FPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEE 451
Query: 529 AQEVSKRLVE---VDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWIS 585
++ + + V P ++ Y + + L ++N+ +EM + + + W S
Sbjct: 452 GLKIYESMESVFGVKPITA-HYACMVDMLGRAGRFNEA----MEMIDSMTVEPDAAVWGS 506
Query: 586 VDGV--------VHEFLVGYL--SHPQIEGIYLTLTGL 613
+ G V EF L P+ G Y+ L+ +
Sbjct: 507 LLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNM 544
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 137/340 (40%), Gaps = 74/340 (21%)
Query: 180 ARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACS 239
ARK+FD +S ++ W S++ GY + + +LF M +N
Sbjct: 36 ARKLFDSCDSKS-ISSWNSMVAGYFANLMPRDARKLFDEMPDRN---------------- 78
Query: 240 SLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG 299
I W NG LV + K G ++++R+ FD +
Sbjct: 79 ------IISW-------------NG----------LVSGYMKNGEIDEARKVFDLMP--- 106
Query: 300 KRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGK 359
+R VV W A++ YV +G SLF M ++ N V+ +L Q G +
Sbjct: 107 ERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK-----NKVSWTVMLIGFLQDGRIDDAC 161
Query: 360 WVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGL 419
++E I K NI TS+I K GR+D A+E+F+ + V+ + M+ G
Sbjct: 162 KLYEM---IPDKDNIAR-----TSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGY 213
Query: 420 AVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLE 479
N +DA ++F MPE ++ L +G +E ++F M +
Sbjct: 214 GQNNRVDDARKIFDVMPE----KTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVI--- 266
Query: 480 HYAC--YIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALL 517
AC I L + G I +A V SM + N+ W ++
Sbjct: 267 --ACNAMISGLGQKGEIAKARRVFDSMKER-NDASWQTVI 303
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 271 bits (694), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 179/510 (35%), Positives = 264/510 (51%), Gaps = 23/510 (4%)
Query: 123 PNDF----TFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVV 178
NDF T +FL+ S +A +H K+G+ +D N LV Y + + +
Sbjct: 23 KNDFFHLKTKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVK-LKEIN 81
Query: 179 FARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQND-TMVSVLSA 237
ARK+FDE+ + V WTS+I+GY G + L +F M P N+ T SV A
Sbjct: 82 TARKLFDEMCE-PNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKA 140
Query: 238 CSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISA 297
CS+L S+I + ++ E+ +G + V++ LV ++GK +VE +R FD +
Sbjct: 141 CSALAESRIGKNIHARLEI------SGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIG 194
Query: 298 AGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTT-RPNHVTMVSVLSACAQIGDLS 356
G R VV W +MI+AY Q+ E + LFR T+ R N + SV+SAC+ +G L
Sbjct: 195 YG-RNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQ 253
Query: 357 LGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMI 416
GK H + +G SN ++ATSL+DMY+KCG L A+++F V+ + +MI
Sbjct: 254 WGKVAHGLVT----RGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMI 309
Query: 417 MGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSL 476
M A +G GE A++LF +M + PN T LG L ACSHSG + G + M+ +
Sbjct: 310 MAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGV 369
Query: 477 TLE--HYACYIDLLARVGCIEEAIEVVTSMPF--KPNNFVWGALLGGCLLHSRVELAQEV 532
+ HY C +D+L R G ++EA E+ ++ + +WGALL LH RVE+ E
Sbjct: 370 VPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEA 429
Query: 533 SKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHE 592
SKRL++ + + Y+ L+NA A W D +LRLEM+ G K+ SWI V+
Sbjct: 430 SKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYV 489
Query: 593 FLVGYLSHPQIEGIYLTLTGLAKHMKAPSH 622
F G LS + I L L K MK H
Sbjct: 490 FHAGDLSCDESGEIERFLKDLEKRMKERGH 519
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 191/410 (46%), Gaps = 37/410 (9%)
Query: 28 DHTPTTFTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFH 83
+ T FTNLL H +LG D L+ Y A ++F
Sbjct: 41 ESTNAAFTNLL------------HTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFD 88
Query: 84 YLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDL-KHRVLAPNDFTFSFLLKVCFRSKDAR 142
+ PN+ + ++I + G + S+F + + R + PN++TF+ + K C ++R
Sbjct: 89 EMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESR 148
Query: 143 CAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDE-IPDRSEVTCWTSLIT 201
+ +HA ++ G + VS+ LV +Y + +V AR+VFD I V WTS+IT
Sbjct: 149 IGKNIHARLEISGLRRNIVVSSSLVDMYGK-CNDVETARRVFDSMIGYGRNVVSWTSMIT 207
Query: 202 GYAQSGHGEEVLQLFHMM--VRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDD 259
YAQ+ G E ++LF + R + SV+SACSSL +++ W L+
Sbjct: 208 AYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSL--GRLQ-WGKVAHGLV-- 262
Query: 260 STSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCP 319
T G + V T L+ ++ K G++ + + F RI V+ + +MI A + G
Sbjct: 263 -TRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRC---HSVISYTSMIMAKAKHGLG 318
Query: 320 VEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQI 379
+ LF MV G PN+VT++ VL AC+ G ++ G EYL + K + +
Sbjct: 319 EAAVKLFDEMVA-GRINPNYVTLLGVLHACSHSGLVNEGL---EYLSLMAEKYGVVPDSR 374
Query: 380 LATSLIDMYSKCGRLDRAKEV---FEHAVSKDVVLFNAMIMGLAVNGEGE 426
T ++DM + GR+D A E+ E + +L+ A++ ++G E
Sbjct: 375 HYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVE 424
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 170/482 (35%), Positives = 255/482 (52%), Gaps = 23/482 (4%)
Query: 140 DARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSL 199
D A V+ ++K Y++ SN L+ Y R ++V ARKVFDE+PDR ++T W ++
Sbjct: 9 DFPSAVAVYGRMRKKNYMS----SNILINGYVRA-GDLVNARKVFDEMPDR-KLTTWNAM 62
Query: 200 ITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDD 259
I G Q EE L LF M P T+ SV S + L R V ++
Sbjct: 63 IAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGL------RSVSIGQQIHGY 116
Query: 260 STSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCP 319
+ G VN+ L +++ + G ++ I + R +V WN +I Q+GCP
Sbjct: 117 TIKYGLELDLVVNSSLAHMYMRNGKLQDGE---IVIRSMPVRNLVAWNTLIMGNAQNGCP 173
Query: 320 VEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQI 379
L L+++M G RPN +T V+VLS+C+ + G+ +H I IG S
Sbjct: 174 ETVLYLYKMMKISGC-RPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGAS----SVVA 228
Query: 380 LATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPE-F 438
+ +SLI MYSKCG L A + F +D V++++MI +G+G++A+ LF M E
Sbjct: 229 VVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQT 288
Query: 439 GLQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEE 496
++ N FL L ACSHSG ++G ++F M + L+HY C +DLL R GC+++
Sbjct: 289 NMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQ 348
Query: 497 AIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALAS 556
A ++ SMP K + +W LL C +H E+AQ V K ++++DP S YV+LAN AS
Sbjct: 349 AEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHAS 408
Query: 557 DRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKH 616
++W DVS +R MR+K +KK+ G SW G VH+F +G S + + IY L L
Sbjct: 409 AKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLE 468
Query: 617 MK 618
MK
Sbjct: 469 MK 470
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 169/368 (45%), Gaps = 19/368 (5%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
A +VF + + + +NA+I L + SLF ++ +P+++T +
Sbjct: 44 ARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAG 103
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWT 197
+ +Q+H + K G D V++ L +Y R + + V +P R+ V W
Sbjct: 104 LRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGK-LQDGEIVIRSMPVRNLVA-WN 161
Query: 198 SLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELI 257
+LI G AQ+G E VL L+ MM RP T V+VLS+CS L I + ++
Sbjct: 162 TLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIH------ 215
Query: 258 DDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDG 317
++ G S +V + L+ ++ K G + + + F S V W++MISAY G
Sbjct: 216 AEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAF---SEREDEDEVMWSSMISAYGFHG 272
Query: 318 CPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLI-SIGHKGNIGS 376
E + LF M ++ N V +++L AC+ G G + + ++ G K +
Sbjct: 273 QGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKH 332
Query: 377 NQILATSLIDMYSKCGRLDRAKEVFEH-AVSKDVVLFNAMIMGLAVNGEGEDALRLFYKM 435
T ++D+ + G LD+A+ + + D+V++ ++ ++ E A R+F ++
Sbjct: 333 ----YTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEI 388
Query: 436 PEFGLQPN 443
+ + PN
Sbjct: 389 LQ--IDPN 394
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 161/505 (31%), Positives = 272/505 (53%), Gaps = 41/505 (8%)
Query: 145 EQVHAHIQKMGYLNDPSVSNGLVAVYAR-GFRNVVFARKVFDEIPDRSEVTCWTSLITGY 203
+Q+H H+ + G + L+ + G +AR+V + + R+ WT++I GY
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPF-LWTAVIRGY 124
Query: 204 AQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIER-------------WV 250
A G +E + ++ M ++ + P + T ++L AC +++ + R +V
Sbjct: 125 AIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFV 184
Query: 251 YFLSELID-----DSTSNGESCHDSVN-------TVLVYLFGKWGNVEKSRERFDRISAA 298
Y + +ID +S D + T L+ + + GN+E + E F+ +
Sbjct: 185 YVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPT- 243
Query: 299 GKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLG 358
+ +V W AM++ + Q+ P E L F M K G R + VT+ +SACAQ+G
Sbjct: 244 --KDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGI-RADEVTVAGYISACAQLG---AS 297
Query: 359 KWVHEYLISIGHKGNIGSNQ--ILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMI 416
K+ + + I K + ++ ++LIDMYSKCG ++ A VF +K+V +++MI
Sbjct: 298 KYA-DRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMI 356
Query: 417 MGLAVNGEGEDALRLF-YKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFS 473
+GLA +G ++AL LF Y + + ++PN TF+GAL ACSHSG +++GRQ+F M +F
Sbjct: 357 LGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFG 416
Query: 474 TSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVS 533
T +HY C +DLL R G ++EA+E++ +M +P+ VWGALLG C +H+ E+A+ +
Sbjct: 417 VQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAA 476
Query: 534 KRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSW-ISVDGVVHE 592
+ L E++P G Y++L+N AS W V +R ++EKG+KK P SW + +G +H+
Sbjct: 477 EHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHK 536
Query: 593 FLVGYLSHPQIEGIYLTLTGLAKHM 617
F G L+HP I L L + +
Sbjct: 537 FFPGNLNHPMSNKIQDKLEELVERL 561
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 178/408 (43%), Gaps = 49/408 (12%)
Query: 32 TTFTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLI------GHYPPRIALRVFHYL 85
++ + L I + + QIH + + G Q + T+LI G A RV +
Sbjct: 50 SSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPV 109
Query: 86 HNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAE 145
N F + A+IR A +G +++ ++ + P FTFS LLK C KD
Sbjct: 110 QFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGR 169
Query: 146 QVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRS-------------- 191
Q HA ++ V N ++ +Y + ++ ARKVFDE+P+R
Sbjct: 170 QFHAQTFRLRGFCFVYVGNTMIDMYVK-CESIDCARKVFDEMPERDVISWTELIAAYARV 228
Query: 192 ----------------EVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVL 235
++ WT+++TG+AQ+ +E L+ F M + +R T+ +
Sbjct: 229 GNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYI 288
Query: 236 SACSSLEISK-IERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDR 294
SAC+ L SK +R V I + S H + + L+ ++ K GNVE++ F
Sbjct: 289 SACAQLGASKYADRAVQ-----IAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVF-- 341
Query: 295 ISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGD 354
+ + V +++MI G E L LF MV + +PN VT V L AC+ G
Sbjct: 342 -MSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGL 400
Query: 355 LSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFE 402
+ G+ V + S+ + + T ++D+ + GRL A E+ +
Sbjct: 401 VDQGRQVFD---SMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIK 445
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 155/448 (34%), Positives = 243/448 (54%), Gaps = 31/448 (6%)
Query: 196 WTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWV----- 250
+T+ I + +G ++ L+ ++ + P T S+L +CS+ I V
Sbjct: 98 FTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSGKLIHTHVLKFGL 157
Query: 251 ----YFLSELIDDSTSNG-----ESCHDSV-------NTVLVYLFGKWGNVEKSRERFDR 294
Y + L+D G + D + +T ++ + K GNVE +R FD
Sbjct: 158 GIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDS 217
Query: 295 ISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGD 354
+ +R +V WN MI Y Q G P + L LF+ ++ EG +P+ +T+V+ LSAC+QIG
Sbjct: 218 MC---ERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGA 274
Query: 355 LSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNA 414
L G+W+H ++ S I N + T LIDMYSKCG L+ A VF KD+V +NA
Sbjct: 275 LETGRWIHVFVKS----SRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNA 330
Query: 415 MIMGLAVNGEGEDALRLFYKMPEF-GLQPNAGTFLGALSACSHSGFLERGRQIFRDM--S 471
MI G A++G +DALRLF +M GLQP TF+G L AC+H+G + G +IF M
Sbjct: 331 MIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQE 390
Query: 472 FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQE 531
+ +EHY C + LL R G ++ A E + +M ++ +W ++LG C LH L +E
Sbjct: 391 YGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKE 450
Query: 532 VSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVH 591
+++ L+ ++ +SG YV+L+N AS + V+ +R M+EKGI K+PG S I ++ VH
Sbjct: 451 IAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVH 510
Query: 592 EFLVGYLSHPQIEGIYLTLTGLAKHMKA 619
EF G H + + IY L +++ +K+
Sbjct: 511 EFRAGDREHSKSKEIYTMLRKISERIKS 538
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 211/457 (46%), Gaps = 64/457 (14%)
Query: 4 LSLHFTQKFKHCYLLPFRSSCSIVDHTPTTFTNLLQGH--IPRSHLLQIHAR--IFQLGA 59
LS T +F+ LP +++ + +LQ H I R +LL +H R + L
Sbjct: 16 LSTTATARFR----LPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLL-LHPRYPVLNLKL 70
Query: 60 HQDNLLATRLIGHYPPRIALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHR 119
H+ H R +L +FH +P++F F A I + G F L+ L
Sbjct: 71 HR------AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSS 124
Query: 120 VLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVF 179
+ PN+FTFS LLK C + + +H H+ K G DP V+ GLV VYA+G +VV
Sbjct: 125 EINPNEFTFSSLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKG-GDVVS 179
Query: 180 ARKVFDEIPDRSEV------TC------------------------WTSLITGYAQSGHG 209
A+KVFD +P+RS V TC W +I GYAQ G
Sbjct: 180 AQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFP 239
Query: 210 EEVLQLFHMMVRQNL-RPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCH 268
+ L LF ++ + +P T+V+ LSACS + + RW++ + S+ +
Sbjct: 240 NDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVK------SSRIRLN 293
Query: 269 DSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRI 328
V T L+ ++ K G++E++ F+ ++ +V WNAMI+ Y G + L LF
Sbjct: 294 VKVCTGLIDMYSKCGSLEEAVLVFNDTP---RKDIVAWNAMIAGYAMHGYSQDALRLFNE 350
Query: 329 MVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMY 388
M +P +T + L ACA G ++ G + E S+G + I L+ +
Sbjct: 351 MQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFE---SMGQEYGIKPKIEHYGCLVSLL 407
Query: 389 SKCGRLDRAKEVFEHA-VSKDVVLFNAMIMGLAVNGE 424
+ G+L RA E ++ + D VL+++++ ++G+
Sbjct: 408 GRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGD 444
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 269 bits (687), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 176/580 (30%), Positives = 287/580 (49%), Gaps = 44/580 (7%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRV-LAPNDFTFSFLLKVCF 136
A +VF + ++ +N+II A+ G +F+ + + P++ T +L C
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 137 RSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYAR----GFRNVVF------------- 179
+Q+H + + V N LV +YA+ N VF
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNA 300
Query: 180 -------------ARKVFDEIPD---RSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQN 223
A ++F+++ + + +V W++ I+GYAQ G G E L + M+
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 224 LRPQNDTMVSVLSACSSLE--ISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGK 281
++P T++SVLS C+S+ + E Y + ID NG + V L+ ++ K
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPID-LRKNGHGDENMVINQLIDMYAK 419
Query: 282 WGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGT-TRPNHV 340
V+ +R FD +S +R VV W MI Y Q G + L L M +E TRPN
Sbjct: 420 CKKVDTARAMFDSLSPK-ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAF 478
Query: 341 TMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEV 400
T+ L ACA + L +GK +H Y ++ ++ N ++ LIDMY+KCG + A+ V
Sbjct: 479 TISCALVACASLAALRIGKQIHAY--ALRNQQN-AVPLFVSNCLIDMYAKCGSISDARLV 535
Query: 401 FEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFL 460
F++ ++K+ V + +++ G ++G GE+AL +F +M G + + T L L ACSHSG +
Sbjct: 536 FDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMI 595
Query: 461 ERGRQIFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLG 518
++G + F M F S EHYAC +DLL R G + A+ ++ MP +P VW A L
Sbjct: 596 DQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLS 655
Query: 519 GCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQ 578
C +H +VEL + ++++ E+ G Y +L+N A+ +W DV+ +R MR KG+KK+
Sbjct: 656 CCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKR 715
Query: 579 PGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMK 618
PG SW+ F VG +HP + IY L + +K
Sbjct: 716 PGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIK 755
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 170/553 (30%), Positives = 255/553 (46%), Gaps = 64/553 (11%)
Query: 19 PFRSSCSIVDHTPTTFTNLLQGHIPR----SHLLQIHARIFQLGAHQDNLLATRLIGHYP 74
PF C + LL I SHL+ + + L +H A L+ +P
Sbjct: 33 PFIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCL-SH-----AVSLLRRFP 86
Query: 75 PRIALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKV 134
P A ++ +N++IR + G + LF + P+++TF F+ K
Sbjct: 87 PSDA----------GVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKA 136
Query: 135 CFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVT 194
C RC E HA G++++ V N LVA+Y+R R++ ARKVFDE+ +V
Sbjct: 137 CGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSR-CRSLSDARKVFDEM-SVWDVV 194
Query: 195 CWTSLITGYAQSGHGEEVLQLFHMMVRQ-NLRPQNDTMVSVLSACSSLEISKIERWVYFL 253
W S+I YA+ G + L++F M + RP N T+V+VL C+SL + + ++
Sbjct: 195 SWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCF 254
Query: 254 ---SELIDDSTSNG------ESC--HDSVNTV--------------LVYLFGKWGNVEKS 288
SE+I + C D NTV +V + + G E +
Sbjct: 255 AVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDA 314
Query: 289 RERFDRISAAG-KRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLS 347
F+++ K VV W+A IS Y Q G E L + R M+ G +PN VT++SVLS
Sbjct: 315 VRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG-IKPNEVTLISVLS 373
Query: 348 ACAQIGDLSLGKWVHEYLISIG---HKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHA 404
CA +G L GK +H Y I K G ++ LIDMY+KC ++D A+ +F+
Sbjct: 374 GCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSL 433
Query: 405 VSK--DVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQ--PNAGTFLGALSACSHSGFL 460
K DVV + MI G + +G+ AL L +M E Q PNA T AL AC+ L
Sbjct: 434 SPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAAL 493
Query: 461 ERGRQI----FRDMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGAL 516
G+QI R+ + L + + C ID+ A+ G I +A V +M K N W +L
Sbjct: 494 RIGKQIHAYALRNQQNAVPLFVSN--CLIDMYAKCGSISDARLVFDNMMAK-NEVTWTSL 550
Query: 517 LGGCLLHSRVELA 529
+ G +H E A
Sbjct: 551 MTGYGMHGYGEEA 563
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 181/413 (43%), Gaps = 57/413 (13%)
Query: 188 PDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIE 247
P + V W SLI Y +G + L LF +M + P N T V AC + +
Sbjct: 87 PSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCG 146
Query: 248 RWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWN 307
+ LS L+ SN V LV ++ + ++ +R+ FD +S VV WN
Sbjct: 147 ESAHALS-LVTGFISN-----VFVGNALVAMYSRCRSLSDARKVFDEMSV---WDVVSWN 197
Query: 308 AMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLIS 367
++I +Y + G P L +F M E RP+++T+V+VL CA +G SLGK +H + ++
Sbjct: 198 SIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVT 257
Query: 368 IGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGED 427
+ N + L+DMY+KCG +D A VF + KDVV +NAM+ G + G ED
Sbjct: 258 ----SEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFED 313
Query: 428 ALRLFYKMPE-----------------------------------FGLQPNAGTFLGALS 452
A+RLF KM E G++PN T + LS
Sbjct: 314 AVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLS 373
Query: 453 ACSHSGFLERGRQIF-RDMSFSTSLTLEHYA-------CYIDLLARVGCIEEAIEVVTSM 504
C+ G L G++I + + L + ID+ A+ ++ A + S+
Sbjct: 374 GCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSL 433
Query: 505 PFKPNNFV-WGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALAS 556
K + V W ++GG H A E+ + E D + ++ AL +
Sbjct: 434 SPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVA 486
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 184/592 (31%), Positives = 289/592 (48%), Gaps = 44/592 (7%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHYPPRIALR----VFHYLHNPNIFPFNAIIRVLAEQG 104
+IH + G D +A LI Y A+ +F + ++ +NA+I + G
Sbjct: 171 KIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSG 230
Query: 105 HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSN 164
+ +L N L+ A + T LL C + D +H++ K G ++ VSN
Sbjct: 231 NAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSN 286
Query: 165 GLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNL 224
L+ +YA F + +KVFD + R ++ W S+I Y + + LF M +
Sbjct: 287 KLIDLYAE-FGRLRDCQKVFDRMYVRDLIS-WNSIIKAYELNEQPLRAISLFQEMRLSRI 344
Query: 225 RPQNDTMVSVLSACSSLEISKIERWV--------YFLSELIDDSTSNGESCHDSVNTVLV 276
+P T++S+ S S L + R V +FL ++ ++ +V
Sbjct: 345 QPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDI-------------TIGNAVV 391
Query: 277 YLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTR 336
++ K G V+ +R F+ + V+ WN +IS Y Q+G E + ++ IM +EG
Sbjct: 392 VMYAKLGLVDSARAVFNWLP---NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIA 448
Query: 337 PNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDR 396
N T VSVL AC+Q G L G +H L+ K + + + TSL DMY KCGRL+
Sbjct: 449 ANQGTWVSVLPACSQAGALRQGMKLHGRLL----KNGLYLDVFVVTSLADMYGKCGRLED 504
Query: 397 AKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSH 456
A +F + V +N +I +G GE A+ LF +M + G++P+ TF+ LSACSH
Sbjct: 505 ALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSH 564
Query: 457 SGFLERGRQIFRDMSFSTSLT--LEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWG 514
SG ++ G+ F M +T L+HY C +D+ R G +E A++ + SM +P+ +WG
Sbjct: 565 SGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWG 624
Query: 515 ALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKG 574
ALL C +H V+L + S+ L EV+P G +V+L+N AS +W V +R KG
Sbjct: 625 ALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKG 684
Query: 575 IKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMK----APSH 622
++K PG S + VD V F G +HP E +Y LT L +K P H
Sbjct: 685 LRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDH 736
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 188/401 (46%), Gaps = 48/401 (11%)
Query: 131 LLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDR 190
L + C + A+C +HA + + + +S LV +Y NV AR FD I +R
Sbjct: 60 LFRYCTNLQSAKC---LHARLVVSKQIQNVCISAKLVNLYCY-LGNVALARHTFDHIQNR 115
Query: 191 SEVTCWTSLITGYAQSGHGEEVLQLFHM-MVRQNLRPQNDTMVSVLSACSS-LEISKIER 248
+V W +I+GY ++G+ EV++ F + M+ L P T SVL AC + ++ +KI
Sbjct: 116 -DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHC 174
Query: 249 WVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNA 308
+ D V L++L+ ++ V +R FD + R + WNA
Sbjct: 175 LALKFGFMWD----------VYVAASLIHLYSRYKAVGNARILFDEMPV---RDMGSWNA 221
Query: 309 MISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISI 368
MIS Y Q G E L+L G + VT+VS+LSAC + GD + G +H Y I
Sbjct: 222 MISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSI-- 274
Query: 369 GHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDA 428
K + S ++ LID+Y++ GRL ++VF+ +D++ +N++I +N + A
Sbjct: 275 --KHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRA 332
Query: 429 LRLFYKMPEFGLQPNAGTF---------LGALSAC-SHSGFLERGRQIFRDMSFSTSLTL 478
+ LF +M +QP+ T LG + AC S GF R D++ ++ +
Sbjct: 333 ISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVV 392
Query: 479 EHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGG 519
+ A++G ++ A V +P + W ++ G
Sbjct: 393 --------MYAKLGLVDSARAVFNWLP-NTDVISWNTIISG 424
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 138/304 (45%), Gaps = 30/304 (9%)
Query: 271 VNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMV 330
++ LV L+ GNV +R FD I R V WN MIS Y + G E + F + +
Sbjct: 88 ISAKLVNLYCYLGNVALARHTFDHIQ---NRDVYAWNLMISGYGRAGNSSEVIRCFSLFM 144
Query: 331 KEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSK 390
P++ T SVL AC + D G +H + G ++ +A SLI +YS+
Sbjct: 145 LSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDV----YVAASLIHLYSR 197
Query: 391 CGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQP-NAGTFLG 449
+ A+ +F+ +D+ +NAMI G +G ++AL L GL+ ++ T +
Sbjct: 198 YKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVS 252
Query: 450 ALSACSHSGFLERGRQIFRDMSFSTSLTLEHYAC--YIDLLARVGCIEEAIEVVTSMPFK 507
LSAC+ +G RG I S L E + IDL A G + + +V M +
Sbjct: 253 LLSACTEAGDFNRGVTI-HSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRM-YV 310
Query: 508 PNNFVWGALLGGCLLHSR----VELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDV 563
+ W +++ L+ + + L QE+ RL + P + LA+ L+ Q D+
Sbjct: 311 RDLISWNSIIKAYELNEQPLRAISLFQEM--RLSRIQPDCL-TLISLASILS---QLGDI 364
Query: 564 SALR 567
A R
Sbjct: 365 RACR 368
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 165/503 (32%), Positives = 266/503 (52%), Gaps = 39/503 (7%)
Query: 146 QVHAHIQKMGYLNDPSVSNGLV-AVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYA 204
Q+HA + G L D + V AV + + +A ++ D ++ + S+I +
Sbjct: 24 QIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDR-SEKPTLFALNSMIRAHC 82
Query: 205 QSGHGEEVLQLFHMMVR--QNLRPQNDTMVSVLSACSSLEISKIERWVYFLS-------- 254
+S E+ + ++ +L+P N T+ ++ AC+ L + + V+ ++
Sbjct: 83 KSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDND 142
Query: 255 -----ELIDDSTSNG--ESCHDSVN----------TVLVYLFGKWGNVEKSRERFDRISA 297
LI G +SCH N T +V + G+V +R+ F+ +
Sbjct: 143 PHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMP- 201
Query: 298 AGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSL 357
+R + WNAMIS Y Q G E L++F +M EG + N V M+SVLSAC Q+G L
Sbjct: 202 --ERDPIAWNAMISGYAQVGESREALNVFHLMQLEGV-KVNGVAMISVLSACTQLGALDQ 258
Query: 358 GKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIM 417
G+W H Y+ + I LAT+L+D+Y+KCG +++A EVF K+V +++ +
Sbjct: 259 GRWAHSYI----ERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALN 314
Query: 418 GLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFSTS 475
GLA+NG GE L LF M + G+ PNA TF+ L CS GF++ G++ F M F
Sbjct: 315 GLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIE 374
Query: 476 LTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKR 535
LEHY C +DL AR G +E+A+ ++ MP KP+ VW +LL ++ +EL SK+
Sbjct: 375 PQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKK 434
Query: 536 LVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLV 595
++E++ + G YV+L+N A W++VS +R M+ KG++KQPG S + V+G VHEF V
Sbjct: 435 MLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFV 494
Query: 596 GYLSHPQIEGIYLTLTGLAKHMK 618
G SHP+ I +++ ++
Sbjct: 495 GDKSHPKYTQIDAVWKDISRRLR 517
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 191/414 (46%), Gaps = 70/414 (16%)
Query: 37 LLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPPRIALRVFHYL----------H 86
LL I + QIHA+++ G +D+ L+GH+ +AL YL
Sbjct: 12 LLDSGITFKEVRQIHAKLYVDGTLKDD----HLVGHFVKAVALSDHKYLDYANQILDRSE 67
Query: 87 NPNIFPFNAIIRVLAEQGHVSHVFSLF-------NDLKHRVLAPNDFTFSFLLKVCFRSK 139
P +F N++IR + F + NDLK P+++T +FL++ C +
Sbjct: 68 KPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLK-----PDNYTVNFLVQACTGLR 122
Query: 140 DARCAEQVHAHIQKMGYLNDPSVSNGLVAVYA---------RGFR--------------- 175
QVH + G+ NDP V GL+++YA + F
Sbjct: 123 MRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVT 182
Query: 176 ------NVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQND 229
+VVFARK+F+ +P+R + W ++I+GYAQ G E L +FH+M + ++
Sbjct: 183 ACARCGDVVFARKLFEGMPERDPIA-WNAMISGYAQVGESREALNVFHLMQLEGVKVNGV 241
Query: 230 TMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSR 289
M+SVLSAC+ L RW + E N + T LV L+ K G++EK+
Sbjct: 242 AMISVLSACTQLGALDQGRWAHSYIE------RNKIKITVRLATTLVDLYAKCGDMEKAM 295
Query: 290 ERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSAC 349
E F ++ V W++ ++ +G + L LF +M ++G T PN VT VSVL C
Sbjct: 296 EVF---WGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVT-PNAVTFVSVLRGC 351
Query: 350 AQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEH 403
+ +G + G+ + S+ ++ I L+D+Y++ GRL+ A + +
Sbjct: 352 SVVGFVDEGQ---RHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQ 402
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 176/597 (29%), Positives = 296/597 (49%), Gaps = 24/597 (4%)
Query: 29 HTPTTFTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHY 84
H T+F L +H+ I +LG + + LI Y A VF
Sbjct: 147 HVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEG 206
Query: 85 LHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCA 144
+ +I + I+ E G+ L + ++ PN++TF LK A
Sbjct: 207 ILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFA 266
Query: 145 EQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYA 204
+ VH I K Y+ DP V GL+ +Y + ++ A KVF+E+P +++V W+ +I +
Sbjct: 267 KGVHGQILKTCYVLDPRVGVGLLQLYTQ-LGDMSDAFKVFNEMP-KNDVVPWSFMIARFC 324
Query: 205 QSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNG 264
Q+G E + LF M + P T+ S+L+ C+ + S + ++ L + G
Sbjct: 325 QNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKV------G 378
Query: 265 ESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLS 324
V+ L+ ++ K ++ + + F +S+ + V WN +I Y G + S
Sbjct: 379 FDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNE---VSWNTVIVGYENLGEGGKAFS 435
Query: 325 LFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSL 384
+FR ++ + VT S L ACA + + LG VH I K N ++ SL
Sbjct: 436 MFREALRNQVS-VTEVTFSSALGACASLASMDLGVQVHGLAI----KTNNAKKVAVSNSL 490
Query: 385 IDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNA 444
IDMY+KCG + A+ VF + DV +NA+I G + +G G ALR+ M + +PN
Sbjct: 491 IDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNG 550
Query: 445 GTFLGALSACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVT 502
TFLG LS CS++G +++G++ F M LEHY C + LL R G +++A++++
Sbjct: 551 LTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIE 610
Query: 503 SMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWND 562
+P++P+ +W A+L + + E A+ ++ +++++P YV+++N A +QW +
Sbjct: 611 GIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWAN 670
Query: 563 VSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMKA 619
V+++R M+E G+KK+PG SWI G VH F VG HP ++ I L L +MKA
Sbjct: 671 VASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWL--NMKA 725
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 178/398 (44%), Gaps = 30/398 (7%)
Query: 127 TFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYAR-GFRNVVFARKVFD 185
+ +L+ C + D A+ +H I K G D +N L+ Y + GF A +FD
Sbjct: 51 AYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKD--ALNLFD 108
Query: 186 EIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISK 245
E+P+R+ V+ + +L GYA ++ + L+ + R+ S L SL+ ++
Sbjct: 109 EMPERNNVS-FVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163
Query: 246 IERWVYF-LSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVV 304
I W++ + +L DS + V L+ + G+V+ +R F+ I + +V
Sbjct: 164 ICPWLHSPIVKLGYDSNA-------FVGAALINAYSVCGSVDSARTVFEGILC---KDIV 213
Query: 305 PWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEY 364
W ++S YV++G + L L M G PN+ T + L A +G K VH
Sbjct: 214 VWAGIVSCYVENGYFEDSLKLLSCMRMAGFM-PNNYTFDTALKASIGLGAFDFAKGVHGQ 272
Query: 365 LISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGE 424
++ + + + L+ +Y++ G + A +VF DVV ++ MI NG
Sbjct: 273 ILKTCYV----LDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGF 328
Query: 425 GEDALRLFYKMPEFGLQPNAGTFLGALSACS---HSGFLERGRQIFRDMSFSTSLTLEHY 481
+A+ LF +M E + PN T L+ C+ SG E+ + + F + + +
Sbjct: 329 CNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSN- 387
Query: 482 ACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGG 519
ID+ A+ ++ A+++ + K N W ++ G
Sbjct: 388 -ALIDVYAKCEKMDTAVKLFAELSSK-NEVSWNTVIVG 423
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 180/595 (30%), Positives = 293/595 (49%), Gaps = 85/595 (14%)
Query: 93 FNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTF-SFLLKVCFRSKDARCAEQVHAHI 151
+NA+I + +LF +KH P++FTF S L + + D + Q HA
Sbjct: 116 YNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAA 175
Query: 152 QKMGYLNDPSVSNGLVAVYARGFRNVVF---ARKVFDEIPDRSEVTCWTSLITGYAQSGH 208
K G SVSN LV+VY++ + ARKVFDEI ++ E + WT+++TGY ++G+
Sbjct: 176 LKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERS-WTTMMTGYVKNGY 234
Query: 209 ---GEEVLQ-----------------------------LFHMMVRQNLRPQNDTMVSVLS 236
GEE+L+ + MV + T SV+
Sbjct: 235 FDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIR 294
Query: 237 ACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRIS 296
AC++ + ++ + V+ +D + + + LV L+ K G +++R F+++
Sbjct: 295 ACATAGLLQLGKQVHAYVLRREDFSFH-------FDNSLVSLYYKCGKFDEARAIFEKMP 347
Query: 297 AAGKRGVVPWNAMISAYV-------------------------------QDGCPVEGLSL 325
A + +V WNA++S YV ++G EGL L
Sbjct: 348 A---KDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKL 404
Query: 326 FRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLI 385
F M +EG P + +CA +G G+ H L+ IG ++ + +LI
Sbjct: 405 FSCMKREGF-EPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSA----GNALI 459
Query: 386 DMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAG 445
MY+KCG ++ A++VF D V +NA+I L +G G +A+ ++ +M + G++P+
Sbjct: 460 TMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRI 519
Query: 446 TFLGALSACSHSGFLERGRQIFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTS 503
T L L+ACSH+G +++GR+ F M + +HYA IDLL R G +A V+ S
Sbjct: 520 TLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIES 579
Query: 504 MPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDV 563
+PFKP +W ALL GC +H +EL + +L + P G Y++L+N A+ QW +V
Sbjct: 580 LPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEV 639
Query: 564 SALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMK 618
+ +R MR++G+KK+ SWI ++ VH FLV SHP+ E +Y+ L L K M+
Sbjct: 640 ARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMR 694
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 133/514 (25%), Positives = 214/514 (41%), Gaps = 120/514 (23%)
Query: 132 LKVCF--RSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEI-- 187
L++C R + A VH +I G+ + N L+ VY + + +AR++FDEI
Sbjct: 19 LRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKS-SELNYARQLFDEISE 77
Query: 188 PDR------------------------------SEVTCWTSLITGYAQSGHGEEVLQLFH 217
PD+ + + ++ITG++ + G + LF
Sbjct: 78 PDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFC 137
Query: 218 MMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVY 277
M + +P N T SVL+ +L ++ V F + + +G SV+ LV
Sbjct: 138 KMKHEGFKPDNFTFASVLAGL-ALVADDEKQCVQFHAAAL----KSGAGYITSVSNALVS 192
Query: 278 LFGKWGN----VEKSRERFDRISAAGKRG-----------------------------VV 304
++ K + + +R+ FD I +R +V
Sbjct: 193 VYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLV 252
Query: 305 PWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEY 364
+NAMIS YV G E L + R MV G + T SV+ ACA G L LGK VH Y
Sbjct: 253 AYNAMISGYVNRGFYQEALEMVRRMVSSG-IELDEFTYPSVIRACATAGLLQLGKQVHAY 311
Query: 365 LISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNA---------- 414
++ + + + SL+ +Y KCG+ D A+ +FE +KD+V +NA
Sbjct: 312 VL---RREDFSFH--FDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGH 366
Query: 415 ---------------------MIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSA 453
MI GLA NG GE+ L+LF M G +P F GA+ +
Sbjct: 367 IGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKS 426
Query: 454 CSHSGFLERGRQI---FRDMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNN 510
C+ G G+Q + F +SL+ + I + A+ G +EEA +V +MP ++
Sbjct: 427 CAVLGAYCNGQQYHAQLLKIGFDSSLSAGN--ALITMYAKCGVVEEARQVFRTMPC-LDS 483
Query: 511 FVWGALLGGCLLHSR----VELAQEVSKRLVEVD 540
W AL+ H V++ +E+ K+ + D
Sbjct: 484 VSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPD 517
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 188/423 (44%), Gaps = 62/423 (14%)
Query: 87 NPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQ 146
N + +NA+I +G + + + ++FT+ +++ C + + +Q
Sbjct: 248 NMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQ 307
Query: 147 VHAHIQKMGYLNDPS--VSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYA 204
VHA++ + D S N LV++Y + + AR +F+++P + V+ W +L++GY
Sbjct: 308 VHAYVLRR---EDFSFHFDNSLVSLYYKCGK-FDEARAIFEKMPAKDLVS-WNALLSGYV 362
Query: 205 QSGH-------------------------------GEEVLQLFHMMVRQNLRPQNDTMVS 233
SGH GEE L+LF M R+ P +
Sbjct: 363 SSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSG 422
Query: 234 VLSACSSLE--ISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRER 291
+ +C+ L + + L D S S G + L+ ++ K G VE++R+
Sbjct: 423 AIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNA--------LITMYAKCGVVEEARQV 474
Query: 292 FDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQ 351
F + V WNA+I+A Q G E + ++ M+K+G RP+ +T+++VL+AC+
Sbjct: 475 FRTMPCLDS---VSWNALIAALGQHGHGAEAVDVYEEMLKKG-IRPDRITLLTVLTACSH 530
Query: 352 IGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVV- 410
G + G+ +Y S+ I LID+ + G+ A+ V E K
Sbjct: 531 AGLVDQGR---KYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAE 587
Query: 411 LFNAMIMGLAVNGEGEDALRLFYKMPEFGLQP-NAGTFLGALSACSHSGFLE---RGRQI 466
++ A++ G V+G E + K+ FGL P + GT++ + + +G E R R++
Sbjct: 588 IWEALLSGCRVHGNMELGIIAADKL--FGLIPEHDGTYMLLSNMHAATGQWEEVARVRKL 645
Query: 467 FRD 469
RD
Sbjct: 646 MRD 648
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 2/159 (1%)
Query: 81 VFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKD 140
+F + NI + +I LAE G LF+ +K P D+ FS +K C
Sbjct: 373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432
Query: 141 ARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLI 200
+Q HA + K+G+ + S N L+ +YA+ V AR+VF +P V+ W +LI
Sbjct: 433 YCNGQQYHAQLLKIGFDSSLSAGNALITMYAK-CGVVEEARQVFRTMPCLDSVS-WNALI 490
Query: 201 TGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACS 239
Q GHG E + ++ M+++ +RP T+++VL+ACS
Sbjct: 491 AALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACS 529
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 171/546 (31%), Positives = 289/546 (52%), Gaps = 47/546 (8%)
Query: 91 FPFNAIIR--VLAEQGHVSHV---FSLFNDLKHRVLAPNDFTFSF--------LLKVCFR 137
F N +IR VL + + S + S+ ++P ++ F +L++C R
Sbjct: 14 FTVNFLIRCKVLPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCAR 73
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYAR-GFRNVVFARKVFDEIPDRSEVTCW 196
+ A+ H I ++ D ++ N L+ Y++ GF V AR+VFD + +RS V+ W
Sbjct: 74 NGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGF--VELARQVFDGMLERSLVS-W 130
Query: 197 TSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSAC----SSLEISKIERWVYF 252
++I Y ++ E L +F M + + T+ SVLSAC +LE K+ +
Sbjct: 131 NTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKL----HC 186
Query: 253 LSELIDDSTSNGESCHD---SVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAM 309
LS ++C D V T L+ L+ K G ++ + + F+ + + V W++M
Sbjct: 187 LSV---------KTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ---DKSSVTWSSM 234
Query: 310 ISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIG 369
++ YVQ+ E L L+R + + N T+ SV+ AC+ + L GK +H +
Sbjct: 235 VAGYVQNKNYEEALLLYR-RAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIC--- 290
Query: 370 HKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDAL 429
K GSN +A+S +DMY+KCG L + +F K++ L+N +I G A + ++ +
Sbjct: 291 -KSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVM 349
Query: 430 RLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDL 487
LF KM + G+ PN TF LS C H+G +E GR+ F+ M ++ S + HY+C +D+
Sbjct: 350 ILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDI 409
Query: 488 LARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGY 547
L R G + EA E++ S+PF P +WG+LL C ++ +ELA+ +++L E++P ++G +
Sbjct: 410 LGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNH 469
Query: 548 VMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIY 607
V+L+N A+++QW +++ R +R+ +KK G SWI + VH F VG HP+I I
Sbjct: 470 VLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREIC 529
Query: 608 LTLTGL 613
TL L
Sbjct: 530 STLDNL 535
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 171/567 (30%), Positives = 294/567 (51%), Gaps = 26/567 (4%)
Query: 44 RSHLLQIHARIFQLGAHQDNLLATRLIGHYPPRI-----ALRVFHYLHNPNIFPFNAIIR 98
+ H+ QIHA + G + +R + RI A +VF L + +N++I
Sbjct: 30 KRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIV 89
Query: 99 VLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLN 158
V + + V L++ + + P+ TF+ +K C E V GY N
Sbjct: 90 VYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKN 149
Query: 159 DPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHM 218
D V + ++ +Y + + + A +F ++ R +V CWT+++TG+AQ+G + ++ +
Sbjct: 150 DVFVCSSVLNLYMKCGK-MDEAEVLFGKMAKR-DVICWTTMVTGFAQAGKSLKAVEFYRE 207
Query: 219 MVRQNLRPQNDTMVSVLSACSSLEISKIERWVY-FLSELIDDSTSNGESCHDSVNTVLVY 277
M + M+ +L A L +K+ R V+ +L G + V T LV
Sbjct: 208 MQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYR-------TGLPMNVVVETSLVD 260
Query: 278 LFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRP 337
++ K G +E + F R+ + V W ++IS + Q+G + M G +P
Sbjct: 261 MYAKVGFIEVASRVFSRMMF---KTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGF-QP 316
Query: 338 NHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRA 397
+ VT+V VL AC+Q+G L G+ VH Y++ K ++ +++ AT+L+DMYSKCG L +
Sbjct: 317 DLVTLVGVLVACSQVGSLKTGRLVHCYIL----KRHV-LDRVTATALMDMYSKCGALSSS 371
Query: 398 KEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHS 457
+E+FEH KD+V +N MI ++G G++ + LF KM E ++P+ TF LSA SHS
Sbjct: 372 REIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHS 431
Query: 458 GFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGA 515
G +E+G+ F M + + +HY C IDLLAR G +EEA++++ S +W A
Sbjct: 432 GLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVA 491
Query: 516 LLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGI 575
LL GC+ H + + + ++++++P S G +++N A+ +W +V+ +R MR +
Sbjct: 492 LLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAM 551
Query: 576 KKQPGSSWISVDGVVHEFLVGYLSHPQ 602
+K PG S I V+G + FL+ LSH +
Sbjct: 552 EKVPGYSAIEVNGELRTFLMEDLSHHE 578
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 265 bits (678), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 176/617 (28%), Positives = 314/617 (50%), Gaps = 63/617 (10%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHYPPRI-----ALRVFHYLHNPNIFPFNAIIRVLAEQ 103
QIH+ + Q Q ++ + + R+ A +F + + ++ +N +I A
Sbjct: 248 QIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASN 307
Query: 104 GHVSHVFSLFNDLKHR-VLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYL-NDPS 161
F LF++L H+ ++P+ T +L VC + D +++H++I + YL D S
Sbjct: 308 CEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTS 367
Query: 162 VSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVR 221
V N L++ YAR F + A F + + ++ W +++ +A S + L L H ++
Sbjct: 368 VGNALISFYAR-FGDTSAAYWAFSLMSTK-DIISWNAILDAFADSPKQFQFLNLLHHLLN 425
Query: 222 QNLRPQNDTMVSVLSACSSLE-ISKIERWVYFLSELIDDSTSNGESCHD----SVNTVLV 276
+ + + T++S+L C +++ I K++ + + HD + L+
Sbjct: 426 EAITLDSVTILSLLKFCINVQGIGKVKE--------VHGYSVKAGLLHDEEEPKLGNALL 477
Query: 277 YLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDG------------------- 317
+ K GNVE + + F + + +R +V +N+++S YV G
Sbjct: 478 DAYAKCGNVEYAHKIF--LGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTT 535
Query: 318 ------------CPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYL 365
CP E + +FR + G RPN VT++++L CAQ+ L L + H Y+
Sbjct: 536 WSLMVRIYAESCCPNEAIGVFREIQARGM-RPNTVTIMNLLPVCAQLASLHLVRQCHGYI 594
Query: 366 ISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEG 425
I +G +G ++ T L+D+Y+KCG L A VF+ +D+V+F AM+ G AV+G G
Sbjct: 595 I----RGGLGDIRLKGT-LLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRG 649
Query: 426 EDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSL--TLEHYAC 483
++AL ++ M E ++P+ L+AC H+G ++ G QI+ + + T+E YAC
Sbjct: 650 KEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYAC 709
Query: 484 YIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTS 543
+DL+AR G +++A VT MP +PN +WG LL C ++R++L V+ L++ +
Sbjct: 710 AVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDD 769
Query: 544 SGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQI 603
+G +V+++N A+D +W V LR M++K +KK G SW+ VDG + F+ G SHP+
Sbjct: 770 TGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRR 829
Query: 604 EGIYLTLTGLAKHMKAP 620
+ I+ + L MK P
Sbjct: 830 DSIFDLVNALYLQMKEP 846
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 156/308 (50%), Gaps = 29/308 (9%)
Query: 123 PNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYAR-GFRNVVF-- 179
P+ TF+ +L +C R D+ + +H++I K G D V N LV++YA+ GF +F
Sbjct: 120 PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGF---IFPD 176
Query: 180 ARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACS 239
A FD I D+ +V W ++I G++++ + + F +M+++ P T+ +VL C+
Sbjct: 177 AYTAFDGIADK-DVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCA 235
Query: 240 SLEIS-------KIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERF 292
S++ + +I +V S L H V LV + + G +E++ F
Sbjct: 236 SMDKNIACRSGRQIHSYVVQRSWL---------QTHVFVCNSLVSFYLRVGRIEEAASLF 286
Query: 293 DRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQI 352
R+ G + +V WN +I+ Y + + LF +V +G P+ VT++S+L CAQ+
Sbjct: 287 TRM---GSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQL 343
Query: 353 GDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLF 412
DL+ GK +H Y++ + + + + +LI Y++ G A F +KD++ +
Sbjct: 344 TDLASGKEIHSYILRHSY---LLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISW 400
Query: 413 NAMIMGLA 420
NA++ A
Sbjct: 401 NAILDAFA 408
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 119/535 (22%), Positives = 232/535 (43%), Gaps = 63/535 (11%)
Query: 50 IHARIFQLGAHQDNLLATRLIGHYPP-----RIALRVFHYLHNPNIFPFNAIIRVLAEQG 104
+H+ I + G +D L+ L+ Y A F + + ++ +NAII +E
Sbjct: 144 MHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENN 203
Query: 105 HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCF---RSKDARCAEQVHAHIQKMGYLNDPS 161
++ F F + PN T + +L VC ++ R Q+H+++ + +L
Sbjct: 204 MMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHV 263
Query: 162 -VSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMV 220
V N LV+ Y R R + A +F + + V+ W +I GYA + + QLFH +V
Sbjct: 264 FVCNSLVSFYLRVGR-IEEAASLFTRMGSKDLVS-WNVVIAGYASNCEWFKAFQLFHNLV 321
Query: 221 RQ-NLRPQNDTMVSVLSACSSLEI----SKIERWVYFLSELIDDSTSNGESCHDSVNTVL 275
+ ++ P + T++S+L C+ L +I ++ S L++D+ SV L
Sbjct: 322 HKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDT---------SVGNAL 372
Query: 276 VYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTT 335
+ + ++G+ + F +S + ++ WNA++ A+ + L+L ++ E T
Sbjct: 373 ISFYARFGDTSAAYWAFSLMST---KDIISWNAILDAFADSPKQFQFLNLLHHLLNEAIT 429
Query: 336 RPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLD 395
+ VT++S+L C + + K VH Y + G + + L +L+D Y+KCG ++
Sbjct: 430 L-DSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPK-LGNALLDAYAKCGNVE 487
Query: 396 RAKEVF-EHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEF---------------- 438
A ++F + + +V +N+++ G +G +DA LF +M
Sbjct: 488 YAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESC 547
Query: 439 ---------------GLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEHYAC 483
G++PN T + L C+ L RQ + +
Sbjct: 548 CPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIRLKGT 607
Query: 484 YIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVE 538
+D+ A+ G ++ A V S + + ++ A++ G +H R + A + + E
Sbjct: 608 LLDVYAKCGSLKHAYSVFQS-DARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTE 661
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 165/347 (47%), Gaps = 26/347 (7%)
Query: 128 FSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEI 187
F ++K C D +H + K+G++ VS ++ +YA+ R + +K+F ++
Sbjct: 24 FLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAK-CRRMDDCQKMFRQM 82
Query: 188 PDRSEVTCWTSLITGYAQSGHGEEVLQLFHMM-VRQNLRPQNDTMVSVLSACSSLEISKI 246
D + W ++TG + S G E ++ F M +P + T VL C L S
Sbjct: 83 -DSLDPVVWNIVLTGLSVSC-GRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYN 140
Query: 247 ERWV--YFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNV-EKSRERFDRISAAGKRGV 303
+ + Y + ++ T G + LV ++ K+G + + FD I+ + V
Sbjct: 141 GKSMHSYIIKAGLEKDTLVGNA--------LVSMYAKFGFIFPDAYTAFDGIA---DKDV 189
Query: 304 VPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGD---LSLGKW 360
V WNA+I+ + ++ + F +M+KE T PN+ T+ +VL CA + G+
Sbjct: 190 VSWNAIIAGFSENNMMADAFRSFCLMLKE-PTEPNYATIANVLPVCASMDKNIACRSGRQ 248
Query: 361 VHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLA 420
+H Y++ + + ++ + SL+ Y + GR++ A +F SKD+V +N +I G A
Sbjct: 249 IHSYVV---QRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYA 305
Query: 421 VNGEGEDALRLFYKMPEFG-LQPNAGTFLGALSACSHSGFLERGRQI 466
N E A +LF+ + G + P++ T + L C+ L G++I
Sbjct: 306 SNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEI 352
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 118/260 (45%), Gaps = 16/260 (6%)
Query: 266 SCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSL 325
+C + +VL ++ K ++ ++ F ++ + V WN +++ + C E +
Sbjct: 54 ACSEVSKSVL-NMYAKCRRMDDCQKMFRQMDSLDP---VVWNIVLTG-LSVSCGRETMRF 108
Query: 326 FRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLI 385
F+ M +P+ VT VL C ++GD GK +H Y+I K + + ++ +L+
Sbjct: 109 FKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYII----KAGLEKDTLVGNALV 164
Query: 386 DMYSKCGRL-DRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNA 444
MY+K G + A F+ KDVV +NA+I G + N DA R F M + +PN
Sbjct: 165 SMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNY 224
Query: 445 GTFLGALSACS---HSGFLERGRQIFRDMSFSTSLTLEHYAC--YIDLLARVGCIEEAIE 499
T L C+ + GRQI + + L + C + RVG IEEA
Sbjct: 225 ATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAAS 284
Query: 500 VVTSMPFKPNNFVWGALLGG 519
+ T M K + W ++ G
Sbjct: 285 LFTRMGSK-DLVSWNVVIAG 303
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 177/418 (42%), Gaps = 67/418 (16%)
Query: 23 SCSIVDHTP--TTFTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYP----PR 76
S +I+ P T+L G S++L+ H+ + + D + LI Y
Sbjct: 330 SVTIISILPVCAQLTDLASGKEIHSYILR-HSYLLE-----DTSVGNALISFYARFGDTS 383
Query: 77 IALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCF 136
A F + +I +NAI+ A+ +L + L + + + T LLK C
Sbjct: 384 AAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCI 443
Query: 137 RSKDARCAEQVHAHIQKMGYLND---PSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEV 193
+ ++VH + K G L+D P + N L+ YA+ NV +A K+F + +R +
Sbjct: 444 NVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAK-CGNVEYAHKIFLGLSERRTL 502
Query: 194 TCWTSLITGYAQSGHGEEVLQLF-----------HMMVR--------------------Q 222
+ SL++GY SG ++ LF +MVR +
Sbjct: 503 VSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQAR 562
Query: 223 NLRPQNDTMVSVLSACSSLEISKIERWV--YFLSELIDDSTSNGESCHDSVNTVLVYLFG 280
+RP T++++L C+ L + R Y + + D G L+ ++
Sbjct: 563 GMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIRLKG---------TLLDVYA 613
Query: 281 KWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHV 340
K G+++ + F + +R +V + AM++ Y G E L ++ M E +P+HV
Sbjct: 614 KCGSLKHAYSVF---QSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMT-ESNIKPDHV 669
Query: 341 TMVSVLSACAQIGDLSLGKWVHEYLISI-GHKGNIGSNQILATSLIDMYSKCGRLDRA 397
+ ++L+AC G + G +++ + ++ G K + +D+ ++ GRLD A
Sbjct: 670 FITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQ----YACAVDLIARGGRLDDA 723
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 78/143 (54%), Gaps = 11/143 (7%)
Query: 326 FRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLI 385
FR++ GT +H + V+ ACA + DL+ G+ +H + +GH I +++ + S++
Sbjct: 11 FRLLSGFGT---DHRVFLDVVKACASVSDLTSGRALHGCVFKLGH---IACSEV-SKSVL 63
Query: 386 DMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAG 445
+MY+KC R+D +++F S D V++N ++ GL+V+ G + +R F+K F +P
Sbjct: 64 NMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSC-GRETMR-FFKAMHFADEPKPS 121
Query: 446 --TFLGALSACSHSGFLERGRQI 466
TF L C G G+ +
Sbjct: 122 SVTFAIVLPLCVRLGDSYNGKSM 144
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 265 bits (677), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 155/453 (34%), Positives = 252/453 (55%), Gaps = 21/453 (4%)
Query: 179 FARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSAC 238
+AR +F+ + + ++ + S+ GY++ + EV LF ++ + P N T S+L AC
Sbjct: 81 YARHLFEAMSE-PDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKAC 139
Query: 239 SSLEISKIERWVYFLSELI--DDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRIS 296
+ + + R ++ LS + DD+ V L+ ++ + +V+ +R FDRI
Sbjct: 140 AVAKALEEGRQLHCLSMKLGLDDNVY--------VCPTLINMYTECEDVDSARCVFDRIV 191
Query: 297 AAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLS 356
VV +NAMI+ Y + P E LSLFR M + +PN +T++SVLS+CA +G L
Sbjct: 192 EPC---VVCYNAMITGYARRNRPNEALSLFREM-QGKYLKPNEITLLSVLSSCALLGSLD 247
Query: 357 LGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMI 416
LGKW+H+Y K + + T+LIDM++KCG LD A +FE KD ++AMI
Sbjct: 248 LGKWIHKY----AKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMI 303
Query: 417 MGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFST 474
+ A +G+ E ++ +F +M +QP+ TFLG L+ACSH+G +E GR+ F M F
Sbjct: 304 VAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGI 363
Query: 475 SLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSK 534
+++HY +DLL+R G +E+A E + +P P +W LL C H+ ++LA++VS+
Sbjct: 364 VPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSE 423
Query: 535 RLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFL 594
R+ E+D + G YV+L+N A +++W V +LR M+++ K PG S I V+ VVHEF
Sbjct: 424 RIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFF 483
Query: 595 VGYLSHPQIEGIYLTLTGLAKHMKAPSHCQSVS 627
G ++ L + K +K + S
Sbjct: 484 SGDGVKSATTKLHRALDEMVKELKLSGYVPDTS 516
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 163/325 (50%), Gaps = 15/325 (4%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
A +F + P+I FN++ R + + VFSLF ++ + P+++TF LLK C
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWT 197
+K Q+H K+G ++ V L+ +Y +V AR VFD I + V C+
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTEC-EDVDSARCVFDRIVEPC-VVCYN 199
Query: 198 SLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELI 257
++ITGYA+ E L LF M + L+P T++SVLS+C+ L + +W++ ++
Sbjct: 200 AMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAK-- 257
Query: 258 DDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDG 317
+ + VNT L+ +F K G+++ + F+++ + W+AMI AY G
Sbjct: 258 ----KHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQA---WSAMIVAYANHG 310
Query: 318 CPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSN 377
+ + +F M E +P+ +T + +L+AC+ G + G+ +Y + K I +
Sbjct: 311 KAEKSMLMFERMRSEN-VQPDEITFLGLLNACSHTGRVEEGR---KYFSQMVSKFGIVPS 366
Query: 378 QILATSLIDMYSKCGRLDRAKEVFE 402
S++D+ S+ G L+ A E +
Sbjct: 367 IKHYGSMVDLLSRAGNLEDAYEFID 391
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 265 bits (677), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 174/617 (28%), Positives = 305/617 (49%), Gaps = 75/617 (12%)
Query: 28 DHTPTTFTNLLQGHIPRSHLLQIHARIFQLGAHQD----NLLATRLIGHYPPRIALRVFH 83
D ++ +++G++ S R F + +D N++ + +A R+F+
Sbjct: 90 DRNYFSWNTMIEGYM-NSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFN 148
Query: 84 YLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARC 143
+ ++ N+++ G+ LF +L + + T + +LK C + +C
Sbjct: 149 AMPEKDVVTLNSLLHGYILNGYAEEALRLFKELN---FSADAITLTTVLKACAELEALKC 205
Query: 144 AEQVHAHIQKMGYLNDPSVSNGLVAVYAR---------------------------GFRN 176
+Q+HA I G D +++ LV VYA+ G+ N
Sbjct: 206 GKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYAN 265
Query: 177 ---VVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVS 233
V +R +FD +R V W S+I+GY + E L LF+ M R R + T+ +
Sbjct: 266 CGRVNESRGLFDRKSNRC-VILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAA 323
Query: 234 VLSACSSLEISKIERWVY-------------FLSELIDDSTSNG---ESCH-----DSVN 272
V++AC L + + ++ S L+D + G E+C +S +
Sbjct: 324 VINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYD 383
Query: 273 TVL----VYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRI 328
T+L + ++ G ++ ++ F+RI + ++ WN+M + + Q+GC VE L F
Sbjct: 384 TILLNSMIKVYFSCGRIDDAKRVFERIE---NKSLISWNSMTNGFSQNGCTVETLEYFHQ 440
Query: 329 MVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMY 388
M K + V++ SV+SACA I L LG+ V +G + S+Q++++SLID+Y
Sbjct: 441 MHKLDLP-TDEVSLSSVISACASISSLELGEQVFARATIVG----LDSDQVVSSSLIDLY 495
Query: 389 SKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFL 448
KCG ++ + VF+ V D V +N+MI G A NG+G +A+ LF KM G++P TF+
Sbjct: 496 CKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFM 555
Query: 449 GALSACSHSGFLERGRQIFRDMSFSTSLT--LEHYACYIDLLARVGCIEEAIEVVTSMPF 506
L+AC++ G +E GR++F M EH++C +DLLAR G +EEAI +V MPF
Sbjct: 556 VVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPF 615
Query: 507 KPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSAL 566
+ +W ++L GC+ + + ++ +++++E++P +S YV L+ A+ W + +
Sbjct: 616 DVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALV 675
Query: 567 RLEMREKGIKKQPGSSW 583
R MRE + K PGSSW
Sbjct: 676 RKLMRENNVTKNPGSSW 692
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 343 VSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFE 402
V +L +C+ +L + + L+ KG + S I+A L+ MYS+ G++ A+ +F+
Sbjct: 30 VRLLQSCSSRNRETLWRQTNGLLL---KKGFLSSIVIVANHLLQMYSRSGKMGIARNLFD 86
Query: 403 HAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLER 462
++ +N MI G +GE +LR F MPE + ++ +S + +G L
Sbjct: 87 EMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPE----RDGYSWNVVVSGFAKAGELSV 142
Query: 463 GRQIFRDMSFSTSLTLEHYA-CYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGC 520
R++F M +TL YI G EEA+ + + F + +L C
Sbjct: 143 ARRLFNAMPEKDVVTLNSLLHGYI----LNGYAEEALRLFKELNFSADAITLTTVLKAC 197
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 265 bits (676), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 183/551 (33%), Positives = 276/551 (50%), Gaps = 28/551 (5%)
Query: 77 IALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCF 136
IA ++F + P+ +N +I A+ LF ++ + FT S L+ C
Sbjct: 92 IARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACC 151
Query: 137 RSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARG--FRNVVFARKVFDEIPDRSEVT 194
D +Q+H G+ + SV+N V Y++G R V DE+ R EV+
Sbjct: 152 DRVD--LIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDEL--RDEVS 207
Query: 195 CWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLS 254
W S+I Y Q G + L L+ M+ + + T+ SVL+A +SL+ R F
Sbjct: 208 -WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGR--QFHG 264
Query: 255 ELIDDSTSNGESCHDSVNTVLVYLFGKWGNVE---KSRERFDRISAAGKRGVVPWNAMIS 311
+LI G + V + L+ + K G + S + F I + +V WN MIS
Sbjct: 265 KLI----KAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPD---LVVWNTMIS 317
Query: 312 AY-VQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGH 370
Y + + E + FR M + G RP+ + V V SAC+ + S K +H I
Sbjct: 318 GYSMNEELSEEAVKSFRQMQRIGH-RPDDCSFVCVTSACSNLSSPSQCKQIHGLAI---- 372
Query: 371 KGNIGSNQI-LATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDAL 429
K +I SN+I + +LI +Y K G L A+ VF+ + V FN MI G A +G G +AL
Sbjct: 373 KSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEAL 432
Query: 430 RLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDL 487
L+ +M + G+ PN TF+ LSAC+H G ++ G++ F M +F EHY+C IDL
Sbjct: 433 LLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDL 492
Query: 488 LARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGY 547
L R G +EEA + +MP+KP + W ALLG C H + LA+ + L+ + P ++ Y
Sbjct: 493 LGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPY 552
Query: 548 VMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIY 607
VMLAN A R+W +++++R MR K I+K+PG SWI V H F+ SHP I +
Sbjct: 553 VMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVN 612
Query: 608 LTLTGLAKHMK 618
L + K MK
Sbjct: 613 EYLEEMMKKMK 623
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 138/299 (46%), Gaps = 35/299 (11%)
Query: 33 TFTNLLQGHIPRSHLL---QIHARIFQLGAHQDNLLATRLIGHYPP-------RIALRVF 82
T ++L HL+ Q H ++ + G HQ++ + + LI Y + +VF
Sbjct: 242 TLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVF 301
Query: 83 HYLHNPNIFPFNAIIRVLAEQGHVSH----VFSLFNDLKHRVLAPNDFTFSFLLKVCFRS 138
+ +P++ +N +I + +S F + HR P+D +F + C
Sbjct: 302 QEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHR---PDDCSFVCVTSACSNL 358
Query: 139 KDARCAEQVH-----AHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEV 193
+Q+H +HI N SV+N L+++Y + N+ AR VFD +P+ + V
Sbjct: 359 SSPSQCKQIHGLAIKSHIPS----NRISVNNALISLYYKS-GNLQDARWVFDRMPELNAV 413
Query: 194 TCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFL 253
+ + +I GYAQ GHG E L L+ M+ + P T V+VLSAC+ K++ +
Sbjct: 414 S-FNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACA--HCGKVDEGQEYF 470
Query: 254 SELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISA 312
+ + + E+ H S ++ L G+ G +E++ D + K G V W A++ A
Sbjct: 471 NTMKETFKIEPEAEHYS---CMIDLLGRAGKLEEAERFIDAMPY--KPGSVAWAALLGA 524
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 181/587 (30%), Positives = 286/587 (48%), Gaps = 35/587 (5%)
Query: 50 IHARIFQ-LGAHQDNLLATRLIGHYP----PRIALRVFHYLHNPNIFPFNAIIRVLAEQG 104
+HARI + L + LA LI Y P A V N+ + ++I LA+ G
Sbjct: 28 VHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNG 87
Query: 105 HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSN 164
H S F +++ + PNDFTF K + +Q+HA K G + D V
Sbjct: 88 HFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGC 147
Query: 165 GLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNL 224
+Y + R ARK+FDEIP+R+ T W + I+ G E ++ F R +
Sbjct: 148 SAFDMYCKT-RLRDDARKLFDEIPERNLET-WNAFISNSVTDGRPREAIEAFIEFRRIDG 205
Query: 225 RPQNDTMVSVLSACSSLEISKIERWVYF-----LSELIDDSTSNGESCHDSVNTVLVYLF 279
P + T + L+ACS W++ L L+ +G SV L+ +
Sbjct: 206 HPNSITFCAFLNACSD--------WLHLNLGMQLHGLV---LRSGFDTDVSVCNGLIDFY 254
Query: 280 GKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNH 339
GK + S F + G + V W ++++AYVQ+ E S+ + ++ +
Sbjct: 255 GKCKQIRSSEIIFTEM---GTKNAVSWCSLVAAYVQNH-EDEKASVLYLRSRKDIVETSD 310
Query: 340 VTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKE 399
+ SVLSACA + L LG+ +H + + K + + ++L+DMY KCG ++ +++
Sbjct: 311 FMISSVLSACAGMAGLELGRSIHAHAV----KACVERTIFVGSALVDMYGKCGCIEDSEQ 366
Query: 400 VFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGL--QPNAGTFLGALSACSHS 457
F+ K++V N++I G A G+ + AL LF +M G PN TF+ LSACS +
Sbjct: 367 AFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRA 426
Query: 458 GFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGA 515
G +E G +IF M ++ EHY+C +D+L R G +E A E + MP +P VWGA
Sbjct: 427 GAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGA 486
Query: 516 LLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGI 575
L C +H + +L ++ L ++DP SG +V+L+N A+ +W + + +R E++ GI
Sbjct: 487 LQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGI 546
Query: 576 KKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMKAPSH 622
KK G SWI+V VH F SH + I TL L M+A +
Sbjct: 547 KKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGY 593
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 180/576 (31%), Positives = 279/576 (48%), Gaps = 72/576 (12%)
Query: 101 AEQGHVSHVFSLFNDLKHR-VLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLND 159
A + +S S L + + P D S LL+ C +K + + +H H++ G+
Sbjct: 22 ATKAELSQAVSRLESLTQQGIRLPFDLLAS-LLQQCGDTKSLKQGKWIHRHLKITGFKRP 80
Query: 160 PSV-SNGLVAVYARG--------------FRNV----------------VFARKVFDEIP 188
++ SN L+ +Y + RN+ V AR VFD +P
Sbjct: 81 NTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMP 140
Query: 189 DRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIER 248
+R +V W +++ GYAQ G+ E L + R ++ + +L+AC ++ R
Sbjct: 141 ER-DVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNR 199
Query: 249 WVY-------FLSE------LIDDSTSNGE-----SCHDSVN-------TVLVYLFGKWG 283
+ FLS +ID G+ C D + T L+ + K G
Sbjct: 200 QAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLG 259
Query: 284 NVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMV 343
++E + + F + ++ V W A+I+ YV+ G L LFR M+ G +P T
Sbjct: 260 DMEAAEKLFCEMP---EKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGV-KPEQFTFS 315
Query: 344 SVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEH 403
S L A A I L GK +H Y+I + N+ N I+ +SLIDMYSK G L+ ++ VF
Sbjct: 316 SCLCASASIASLRHGKEIHGYMI----RTNVRPNAIVISSLIDMYSKSGSLEASERVFRI 371
Query: 404 AVSK-DVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLER 462
K D V +N MI LA +G G ALR+ M +F +QPN T + L+ACSHSG +E
Sbjct: 372 CDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEE 431
Query: 463 GRQIFRDMSFSTSLT--LEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGC 520
G + F M+ + EHYAC IDLL R GC +E + + MPF+P+ +W A+LG C
Sbjct: 432 GLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVC 491
Query: 521 LLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPG 580
+H EL ++ + L+++DP SS Y++L++ A +W V LR M+++ + K+
Sbjct: 492 RIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKA 551
Query: 581 SSWISVDGVVHEFLV--GYLSHPQIEGIYLTLTGLA 614
SWI ++ V F V G +H + E IY L LA
Sbjct: 552 VSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLA 587
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 167/378 (44%), Gaps = 46/378 (12%)
Query: 81 VFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKD 140
VF + ++ +N ++ A+ G++ + + + + N+F+F+ LL C +S+
Sbjct: 135 VFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQ 194
Query: 141 ARCAEQVHAHIQKMGYLNDPSVSNGLVAVYAR---------------------------- 172
+ Q H + G+L++ +S ++ YA+
Sbjct: 195 LQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISG 254
Query: 173 --GFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDT 230
++ A K+F E+P+++ V+ WT+LI GY + G G L LF M+ ++P+ T
Sbjct: 255 YAKLGDMEAAEKLFCEMPEKNPVS-WTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFT 313
Query: 231 MVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRE 290
S L C+S I+ + +I + + V + L+ ++ K G++E S E
Sbjct: 314 FSSCL--CASASIASLRHGKEIHGYMIRTNVRP----NAIVISSLIDMYSKSGSLEAS-E 366
Query: 291 RFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACA 350
R RI K V WN MISA Q G + L + M+K +PN T+V +L+AC+
Sbjct: 367 RVFRI-CDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIK-FRVQPNRTTLVVILNACS 424
Query: 351 QIGDLSLG-KWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDR-AKEVFEHAVSKD 408
G + G +W + G I +Q LID+ + G +++ E D
Sbjct: 425 HSGLVEEGLRWFESMTVQHG----IVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPD 480
Query: 409 VVLFNAMIMGLAVNGEGE 426
++NA++ ++G E
Sbjct: 481 KHIWNAILGVCRIHGNEE 498
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 122/290 (42%), Gaps = 41/290 (14%)
Query: 295 ISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGD 354
IS KR + + +S + + +S + ++G P + + S+L C
Sbjct: 3 ISNPRKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDL-LASLLQQCGDTKS 61
Query: 355 LSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGR--------------------- 393
L GKW+H +L G K N +L+ LI MY KCG+
Sbjct: 62 LKQGKWIHRHLKITGFKR---PNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNN 118
Query: 394 ----------LDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPN 443
L RA+ VF+ +DVV +N M++G A +G +AL + + G++ N
Sbjct: 119 MVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFN 178
Query: 444 AGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEHYAC-YIDLLARVGCIEEAIEVVT 502
+F G L+AC S L+ RQ + + L+ +C ID A+ G +E A
Sbjct: 179 EFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFD 238
Query: 503 SMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTS----SGGYV 548
M K + +W L+ G +E A+++ + E +P S GYV
Sbjct: 239 EMTVK-DIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYV 287
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 96/221 (43%), Gaps = 17/221 (7%)
Query: 23 SCSIVDHTPTTFTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPP----RIA 78
SCSI+D + Q ++ R F +D + T LI Y A
Sbjct: 217 SCSIID----AYAKCGQ--------MESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAA 264
Query: 79 LRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRS 138
++F + N + A+I QG + LF + + P FTFS L
Sbjct: 265 EKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASI 324
Query: 139 KDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTS 198
R +++H ++ + + V + L+ +Y++ ++ + +VF D+ + W +
Sbjct: 325 ASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKS-GSLEASERVFRICDDKHDCVFWNT 383
Query: 199 LITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACS 239
+I+ AQ G G + L++ M++ ++P T+V +L+ACS
Sbjct: 384 MISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACS 424
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 262 bits (669), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 166/533 (31%), Positives = 276/533 (51%), Gaps = 61/533 (11%)
Query: 76 RIALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVC 135
+ A ++F + P++ N ++R A+ SL+ +++ R ++P+ +TF+F+LK C
Sbjct: 63 KYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKAC 122
Query: 136 FRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTC 195
+ + H + + G++ + V N L+ +A ++ A ++FD+ +V
Sbjct: 123 SKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHA-NCGDLGIASELFDDSAKAHKVA- 180
Query: 196 WTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSE 255
W+S+ +GYA+ G +E ++LF M P D + W
Sbjct: 181 WSSMTSGYAKRGKIDEAMRLFDEM------PYKDQVA----------------W------ 212
Query: 256 LIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQ 315
V++ K ++ +RE FDR + ++ VV WNAMIS YV
Sbjct: 213 -----------------NVMITGCLKCKEMDSARELFDRFT---EKDVVTWNAMISGYVN 252
Query: 316 DGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGH-KGNI 374
G P E L +F+ M ++ P+ VT++S+LSACA +GDL GK +H Y++ +I
Sbjct: 253 CGYPKEALGIFKEM-RDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSI 311
Query: 375 GSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYK 434
+ +LIDMY+KCG +DRA EVF +D+ +N +I+GLA++ E ++ +F +
Sbjct: 312 YVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEE 370
Query: 435 MPEFGLQPNAGTFLGALSACSHSGFLERGRQIF---RDMSFSTSLTLEHYACYIDLLARV 491
M + PN TF+G + ACSHSG ++ GR+ F RDM ++ ++HY C +D+L R
Sbjct: 371 MQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDM-YNIEPNIKHYGCMVDMLGRA 429
Query: 492 GCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLA 551
G +EEA V SM +PN VW LLG C ++ VEL + +++L+ + SG YV+L+
Sbjct: 430 GQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLS 489
Query: 552 NALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYL--SHPQ 602
N AS QW+ V +R + +KK G S I D + ++ YL S P+
Sbjct: 490 NIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEEDD--DKLMMRYLLSSEPE 540
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 117/269 (43%), Gaps = 18/269 (6%)
Query: 283 GNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTM 342
G ++ + + FD I K V N ++ Q P + +SL+ M K G + P+ T
Sbjct: 60 GALKYAHKLFDEIP---KPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVS-PDRYTF 115
Query: 343 VSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFE 402
VL AC+++ S G H ++ G N+ + +LI ++ CG L A E+F+
Sbjct: 116 TFVLKACSKLEWRSNGFAFHGKVVRHG----FVLNEYVKNALILFHANCGDLGIASELFD 171
Query: 403 HAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLER 462
+ V +++M G A G+ ++A+RLF +MP + + ++ C ++
Sbjct: 172 DSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMP----YKDQVAWNVMITGCLKCKEMDS 227
Query: 463 GRQIFRDMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFK---PNNFVWGALLGG 519
R++F + +T + I G +EA+ + M P+ +LL
Sbjct: 228 ARELFDRFTEKDVVT---WNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSA 284
Query: 520 CLLHSRVELAQEVSKRLVEVDPTSSGGYV 548
C + +E + + ++E SS YV
Sbjct: 285 CAVLGDLETGKRLHIYILETASVSSSIYV 313
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 262 bits (669), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 163/601 (27%), Positives = 312/601 (51%), Gaps = 70/601 (11%)
Query: 33 TFTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHY----PPRIALRVFHYLHNP 88
T+T+++ G+I + + ++ + ++ + T ++ Y IA +F +
Sbjct: 79 TWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER 138
Query: 89 NIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVH 148
N+ +N +I A+ G + LF+++ R N +++ ++K + A +
Sbjct: 139 NVVSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLF 194
Query: 149 AHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGH 208
+ + ++ ++ +GL A+ + V AR++FD +P+R+ + W ++ITGYAQ+
Sbjct: 195 ERMPRRDVVSWTAMVDGL----AKNGK-VDEARRLFDCMPERN-IISWNAMITGYAQNNR 248
Query: 209 GEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCH 268
+E QLF +M P+ D W ++ I + N
Sbjct: 249 IDEADQLFQVM------PERD----------------FASWNTMITGFIRNREMN----- 281
Query: 269 DSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRI 328
K+ FDR+ ++ V+ W MI+ YV++ E L++F
Sbjct: 282 ------------------KACGLFDRMP---EKNVISWTTMITGYVENKENEEALNVFSK 320
Query: 329 MVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMY 388
M+++G+ +PN T VS+LSAC+ + L G+ +H+ + H+ N+I+ ++L++MY
Sbjct: 321 MLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQ----KNEIVTSALLNMY 376
Query: 389 SKCGRLDRAKEVFEHAV--SKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGT 446
SK G L A+++F++ + +D++ +N+MI A +G G++A+ ++ +M + G +P+A T
Sbjct: 377 SKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVT 436
Query: 447 FLGALSACSHSGFLERGRQIFRDMSFSTSLTL--EHYACYIDLLARVGCIEEAIEVVTSM 504
+L L ACSH+G +E+G + F+D+ SL L EHY C +DL R G +++ +
Sbjct: 437 YLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCD 496
Query: 505 PFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVS 564
+ + +GA+L C +H+ V +A+EV K+++E +G YV+++N A++ + + +
Sbjct: 497 DARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAA 556
Query: 565 ALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMKAPSHCQ 624
+R++M+EKG+KKQPG SW+ V H F+VG SHPQ E + L+ L M+ +
Sbjct: 557 EMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMRKNKNVT 616
Query: 625 S 625
S
Sbjct: 617 S 617
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 176/431 (40%), Gaps = 101/431 (23%)
Query: 177 VVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMM-VRQNLRPQNDTMVSVL 235
+ ARK+FD +P+R VT WT +ITGY + G E +LF + R+N+ MVS
Sbjct: 62 IAEARKLFDGLPERDVVT-WTHVITGYIKLGDMREARELFDRVDSRKNVVTWT-AMVSGY 119
Query: 236 SACSSLEISKI------ERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSR 289
L I+++ ER V + +ID + + G ++K+
Sbjct: 120 LRSKQLSIAEMLFQEMPERNVVSWNTMIDG-------------------YAQSGRIDKAL 160
Query: 290 ERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVK----------EGTTRPNH 339
E FD + +R +V WN+M+ A VQ G E ++LF M + +G +
Sbjct: 161 ELFDEMP---ERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGK 217
Query: 340 VTMVSVLSAC----------AQIGDLSLGKWVHE--YLISIGHKGNIGSNQILATSLI-- 385
V L C A I + + E L + + + S + T I
Sbjct: 218 VDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRN 277
Query: 386 -DMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFG-LQPN 443
+M CG DR E K+V+ + MI G N E E+AL +F KM G ++PN
Sbjct: 278 REMNKACGLFDRMPE-------KNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPN 330
Query: 444 AGTFLGALSACSHSGFLERGRQIFRDMSFS--------TSLTLEHYA------------- 482
GT++ LSACS L G+QI + +S S TS L Y+
Sbjct: 331 VGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFD 390
Query: 483 ----CYIDLLARVGCI---------EEAIEVVTSMP---FKPNNFVWGALLGGCLLHSRV 526
C DL++ I +EAIE+ M FKP+ + LL C V
Sbjct: 391 NGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLV 450
Query: 527 ELAQEVSKRLV 537
E E K LV
Sbjct: 451 EKGMEFFKDLV 461
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 143/324 (44%), Gaps = 69/324 (21%)
Query: 281 KWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHV 340
K G + ++R+ FD + +R VV W +I+ Y++ G E LF + +R N V
Sbjct: 58 KVGKIAEARKLFDGLP---ERDVVTWTHVITGYIKLGDMREARELFDRV----DSRKNVV 110
Query: 341 TMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEV 400
T +++S + LS+ + + + + N + ++ID Y++ GR+D+A E+
Sbjct: 111 TWTAMVSGYLRSKQLSIAEMLFQEMPE--------RNVVSWNTMIDGYAQSGRIDKALEL 162
Query: 401 FEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFL 460
F+ +++V +N+M+ L G ++A+ LF +MP
Sbjct: 163 FDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPR----------------------- 199
Query: 461 ERGRQIFRDMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGC 520
RD+ T++ +D LA+ G ++EA + MP + N W A++ G
Sbjct: 200 -------RDVVSWTAM--------VDGLAKNGKVDEARRLFDCMPER-NIISWNAMITGY 243
Query: 521 LLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPG 580
++R++ A ++ + + E D S + + +R+ N L M EK +
Sbjct: 244 AQNNRIDEADQLFQVMPERDFAS---WNTMITGFIRNREMNKACGLFDRMPEKNV----- 295
Query: 581 SSWISVDGVVHEFLVGYLSHPQIE 604
SW ++ + GY+ + + E
Sbjct: 296 ISWTTM-------ITGYVENKENE 312
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 161/510 (31%), Positives = 266/510 (52%), Gaps = 15/510 (2%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
A VF + P+++ +N++IR + + + ++ + +P+ FTF ++LK C
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSG 119
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWT 197
+D + VH + K G+ + VS L+ +Y V + +VF++IP + V W
Sbjct: 120 LRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYM-CCGEVNYGLRVFEDIP-QWNVVAWG 177
Query: 198 SLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVY-FLSEL 256
SLI+G+ + + ++ F M ++ MV +L AC + +W + FL L
Sbjct: 178 SLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGL 237
Query: 257 IDDSTSNGESCHDSV-NTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQ 315
D + + + T L+ ++ K G++ +R FD + +R +V WN++I+ Y Q
Sbjct: 238 GFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMP---ERTLVSWNSIITGYSQ 294
Query: 316 DGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIG 375
+G E L +F M+ G P+ VT +SV+ A G LG+ +H Y+ G
Sbjct: 295 NGDAEEALCMFLDMLDLGIA-PDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFV---- 349
Query: 376 SNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKM 435
+ + +L++MY+K G + AK+ FE KD + + +I+GLA +G G +AL +F +M
Sbjct: 350 KDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRM 409
Query: 436 PEFG-LQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSL--TLEHYACYIDLLARVG 492
E G P+ T+LG L ACSH G +E G++ F +M L T+EHY C +D+L+R G
Sbjct: 410 QEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAG 469
Query: 493 CIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLAN 552
EEA +V +MP KPN +WGALL GC +H +EL + + E + SG YV+L+N
Sbjct: 470 RFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSN 529
Query: 553 ALASDRQWNDVSALRLEMREKGIKKQPGSS 582
A +W DV +R M+ K + K G S
Sbjct: 530 IYAKAGRWADVKLIRESMKSKRVDKVLGHS 559
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 194/415 (46%), Gaps = 49/415 (11%)
Query: 176 NVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVL 235
N+ +AR VF+ I D V W S+I GY+ S + ++ L + M+R+ P T VL
Sbjct: 56 NLSYARSVFESI-DCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVL 114
Query: 236 SACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRI 295
ACS L R + F S + G + V+T L++++ G V F+ I
Sbjct: 115 KACSGL------RDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDI 168
Query: 296 SAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDL 355
+ VV W ++IS +V + + + FR M G + N MV +L AC + D+
Sbjct: 169 P---QWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGV-KANETIMVDLLVACGRCKDI 224
Query: 356 SLGKWVHEYLISIGH----KGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVL 411
GKW H +L +G + +G N ILATSLIDMY+KCG L A+ +F+ + +V
Sbjct: 225 VTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVS 284
Query: 412 FNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMS 471
+N++I G + NG+ E+AL +F M + G+ P+ TFL + A G + G+ I +S
Sbjct: 285 WNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVS 344
Query: 472 FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQE 531
+ G +++A V AL+ ++++ A+
Sbjct: 345 ------------------KTGFVKDAAIVC-------------ALVN---MYAKTGDAES 370
Query: 532 VSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISV 586
K +++ + + ++ LAS N+ ++ M+EKG G +++ V
Sbjct: 371 AKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGV 425
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 101/209 (48%), Gaps = 9/209 (4%)
Query: 55 FQLGAHQDNLLATRLIGHYPPRIALRVFHYLHNP----NIFPFNAIIRVLAEQGHVSHVF 110
FQ + +LAT LI Y LR YL + + +N+II ++ G
Sbjct: 243 FQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEAL 302
Query: 111 SLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVY 170
+F D+ +AP+ TF +++ ++ + +HA++ K G++ D ++ LV +Y
Sbjct: 303 CMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMY 362
Query: 171 ARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFH-MMVRQNLRPQND 229
A+ + A+K F+++ ++ + WT +I G A GHG E L +F M + N P
Sbjct: 363 AKT-GDAESAKKAFEDL-EKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGI 420
Query: 230 TMVSVLSACSSLEISKIERWVYFLSELID 258
T + VL ACS I +E + +E+ D
Sbjct: 421 TYLGVLYACS--HIGLVEEGQRYFAEMRD 447
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/401 (37%), Positives = 227/401 (56%), Gaps = 28/401 (6%)
Query: 230 TMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSR 289
+++++ S+C L ++ + DDS S +SV V + K G ++ +R
Sbjct: 102 SLLNMYSSCGDLRSAQ---------RVFDDSGSKDLPAWNSV----VNAYAKAGLIDDAR 148
Query: 290 ERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMV----KEGTTRPNHVTMVSV 345
+ FD + +R V+ W+ +I+ YV G E L LFR M E RPN TM +V
Sbjct: 149 KLFDEMP---ERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTV 205
Query: 346 LSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAV 405
LSAC ++G L GKWVH Y+ K ++ + +L T+LIDMY+KCG L+RAK VF
Sbjct: 206 LSACGRLGALEQGKWVHAYI----DKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG 261
Query: 406 SK-DVVLFNAMIMGLAVNGEGEDALRLFYKMPEF-GLQPNAGTFLGALSACSHSGFLERG 463
SK DV ++AMI LA+ G ++ +LF +M + PN+ TF+G L AC H G + G
Sbjct: 262 SKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEG 321
Query: 464 RQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCL 521
+ F+ M F + +++HY C +DL R G I+EA + SMP +P+ +WG+LL G
Sbjct: 322 KSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSR 381
Query: 522 LHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGS 581
+ ++ + KRL+E+DP +SG YV+L+N A +W +V +R EM KGI K PG
Sbjct: 382 MLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGC 441
Query: 582 SWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMKAPSH 622
S++ V+GVVHEF+VG S + E IY L + + ++ +
Sbjct: 442 SYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGY 482
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 169/393 (43%), Gaps = 70/393 (17%)
Query: 81 VFHYLH-NPNIFPFNAIIRVL-----AEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKV 134
+FH H F +N IIR + + Q H S++ +++ ++P+ TF FLL
Sbjct: 14 IFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSP--ISVYLRMRNHRVSPDFHTFPFLLPS 71
Query: 135 CFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYA---------RGFRN--------- 176
++ HA I G DP V L+ +Y+ R F +
Sbjct: 72 FHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAW 131
Query: 177 ------------VVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQN- 223
+ ARK+FDE+P+R+ V W+ LI GY G +E L LF M
Sbjct: 132 NSVVNAYAKAGLIDDARKLFDEMPERN-VISWSCLINGYVMCGKYKEALDLFREMQLPKP 190
Query: 224 ----LRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLF 279
+RP TM +VLSAC L + +WV+ ID + + T L+ ++
Sbjct: 191 NEAFVRPNEFTMSTVLSACGRLGALEQGKWVH---AYIDKYHVEIDIV---LGTALIDMY 244
Query: 280 GKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNH 339
K G++E+++ F+ + + K+ V ++AMI G E LF M PN
Sbjct: 245 AKCGSLERAKRVFNALGS--KKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNS 302
Query: 340 VTMVSVLSACAQIGDLSLGKWVHEYLI-------SIGHKGNIGSNQILATSLIDMYSKCG 392
VT V +L AC G ++ GK + +I SI H G ++D+Y + G
Sbjct: 303 VTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYG----------CMVDLYGRSG 352
Query: 393 RLDRAKE-VFEHAVSKDVVLFNAMIMGLAVNGE 424
+ A+ + + DV+++ +++ G + G+
Sbjct: 353 LIKEAESFIASMPMEPDVLIWGSLLSGSRMLGD 385
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 100/239 (41%), Gaps = 44/239 (18%)
Query: 41 HIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAI 96
H+P + HA+I G +D + T L+ Y R A RVF + ++ +N++
Sbjct: 77 HLPLGQ--RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSV 134
Query: 97 IRVLAEQGHVSHVFSLFNDLKHR------------------------------------V 120
+ A+ G + LF+++ R
Sbjct: 135 VNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAF 194
Query: 121 LAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFA 180
+ PN+FT S +L C R + VHA+I K D + L+ +YA+ ++ A
Sbjct: 195 VRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKC-GSLERA 253
Query: 181 RKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLF-HMMVRQNLRPQNDTMVSVLSAC 238
++VF+ + + +V ++++I A G +E QLF M N+ P + T V +L AC
Sbjct: 254 KRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGAC 312
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 106/251 (42%), Gaps = 43/251 (17%)
Query: 306 WNAMISAYVQDGCPVEGLSLFRIMVKEGTTR--PNHVTMVSVLSACAQIGDLSLGKWVHE 363
WN +I A V + + S + ++ R P+ T +L + L LG+ H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 364 YLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNG 423
++ G + + + TSL++MYS CG L A+ VF+ + SKD+ +N+++ A G
Sbjct: 87 QILLFG----LDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 424 EGEDALRLFYKMPEFG------------------------------------LQPNAGTF 447
+DA +LF +MPE ++PN T
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 448 LGALSACSHSGFLERGRQIFRDMS-FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPF 506
LSAC G LE+G+ + + + + + ID+ A+ G +E A V ++
Sbjct: 203 STVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS 262
Query: 507 KPNNFVWGALL 517
K + + A++
Sbjct: 263 KKDVKAYSAMI 273
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 182/657 (27%), Positives = 309/657 (47%), Gaps = 60/657 (9%)
Query: 7 HFTQKFKHCYLLPFRSSCSIVDHTPT-TFTNLLQGHIP-RSHL--LQIHARIFQLGAHQD 62
H FK LL +SS ++ D + +LL + R+ L +Q+HA G
Sbjct: 18 HLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYH 77
Query: 63 NLLATRLIGHYPP-RIALRVFHYLHNPNIF---PFNAIIRVLAEQGHVSHVFSLFNDLKH 118
++L +L+ Y + + N +I P+N +I A+ V + + +
Sbjct: 78 SVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVS 137
Query: 119 RVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVV 178
+ + P+ FT+ +LK C + D VH I+ Y + V N L+++Y R FRN+
Sbjct: 138 KGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKR-FRNMG 196
Query: 179 FARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMM---------VRQNL----- 224
AR++FD + +R V+ W ++I YA G E +LF M + N+
Sbjct: 197 IARRLFDRMFERDAVS-WNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGC 255
Query: 225 --------------RPQN-------DTMVSVLSACSSLEISKIERWVYFLSELIDDSTSN 263
R +N M+ L ACS + ++ + ++ L+
Sbjct: 256 LQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAI-------- 307
Query: 264 GESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGL 323
S +D ++ V L + + R + + WN++IS Y Q E
Sbjct: 308 -HSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEAS 366
Query: 324 SLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATS 383
L R M+ G +PN +T+ S+L CA+I +L GK H Y++ + +L S
Sbjct: 367 HLLREMLVAGF-QPNSITLASILPLCARIANLQHGKEFHCYIL---RRKCFKDYTMLWNS 422
Query: 384 LIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPN 443
L+D+Y+K G++ AK+V + +D V + ++I G GEG AL LF +M G++P+
Sbjct: 423 LVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPD 482
Query: 444 AGTFLGALSACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVV 501
T + LSACSHS + G ++F M + L+H++C +DL R G + +A +++
Sbjct: 483 HVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDII 542
Query: 502 TSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWN 561
+MP+KP+ W LL C +H ++ + +++L+E+ P + G YV++AN A+ W+
Sbjct: 543 HNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWS 602
Query: 562 DVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMK 618
++ +R MR+ G+KK PG +WI D F VG S P+ Y L GL + MK
Sbjct: 603 KLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMK 659
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 130/521 (24%), Positives = 199/521 (38%), Gaps = 97/521 (18%)
Query: 100 LAEQGHVSHVFSLFN--DLKHRVLAPNDFTF---SFLLKVCFRSKDARCAEQVHAHIQKM 154
LA GH+ F F+ L+ +D + LL C + QVHAH
Sbjct: 13 LASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISS 72
Query: 155 GYLNDPSVSNGLVAVYA-----RGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHG 209
G + LV Y+ ++++ + +P W LI YA++
Sbjct: 73 GVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLP-------WNVLIASYAKNELF 125
Query: 210 EEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHD 269
EEV+ + MV + +RP T SVL AC R V+ E+ +S S +
Sbjct: 126 EEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEV----SSYKSSLY- 180
Query: 270 SVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIM 329
V L+ ++ ++ N+ +R FDR+ +R V WNA+I+ Y +G E LF M
Sbjct: 181 -VCNALISMYKRFRNMGIARRLFDRMF---ERDAVSWNAVINCYASEGMWSEAFELFDKM 236
Query: 330 VKEGT----------------------------------TRPNHVTMVSVLSACAQIGDL 355
G T + V M+ L AC+ IG +
Sbjct: 237 WFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAI 296
Query: 356 SLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAM 415
LGK +H I H G + + T LI MYSKC L A VF + +N++
Sbjct: 297 RLGKEIHGLAI---HSSYDGIDNVRNT-LITMYSKCKDLRHALIVFRQTEENSLCTWNSI 352
Query: 416 IMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTS 475
I G A + E+A L +M G QPN+ T L C+ L+ G++
Sbjct: 353 ISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKE---------- 402
Query: 476 LTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKR 535
+ CYI R C FK +W +L+ ++ A++VS
Sbjct: 403 -----FHCYI---LRRKC------------FKDYTMLWNSLVDVYAKSGKIVAAKQVSDL 442
Query: 536 LVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIK 576
+ + D + Y L + + + AL EM GIK
Sbjct: 443 MSKRDEVT---YTSLIDGYGNQGEGGVALALFKEMTRSGIK 480
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 175/555 (31%), Positives = 291/555 (52%), Gaps = 29/555 (5%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
A RVF+++ + + +N++I L + G + ++ + P FT L C
Sbjct: 368 ARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCAS 427
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYAR-GFRNVVFARKVFDEIPDRSEVTCW 196
K A+ +Q+H K+G + SVSN L+ +YA G+ N RK+F +P+ +V+ W
Sbjct: 428 LKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNE--CRKIFSSMPEHDQVS-W 484
Query: 197 TSLITGYAQSGHG-EEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLS- 254
S+I A+S E + F R + T SVLSA SSL ++ + ++ L+
Sbjct: 485 NSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLAL 544
Query: 255 --ELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISA 312
+ D++T+ L+ +GK G ++ + F R+ A +R V WN+MIS
Sbjct: 545 KNNIADEATTE---------NALIACYGKCGEMDGCEKIFSRM--AERRDNVTWNSMISG 593
Query: 313 YVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKG 372
Y+ + + L L M++ G R + +VLSA A + L G VH + +
Sbjct: 594 YIHNELLAKALDLVWFMLQTGQ-RLDSFMYATVLSAFASVATLERGMEVHACSV----RA 648
Query: 373 NIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLF 432
+ S+ ++ ++L+DMYSKCGRLD A F ++ +N+MI G A +G+GE+AL+LF
Sbjct: 649 CLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLF 708
Query: 433 YKMPEFG-LQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLT--LEHYACYIDLLA 489
M G P+ TF+G LSACSH+G LE G + F MS S L +EH++C D+L
Sbjct: 709 ETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLG 768
Query: 490 RVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHS--RVELAQEVSKRLVEVDPTSSGGY 547
R G +++ + + MP KPN +W +LG C + + EL ++ ++ L +++P ++ Y
Sbjct: 769 RAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNY 828
Query: 548 VMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIY 607
V+L N A+ +W D+ R +M++ +KK+ G SW+++ VH F+ G SHP + IY
Sbjct: 829 VLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIY 888
Query: 608 LTLTGLAKHMKAPSH 622
L L + M+ +
Sbjct: 889 KKLKELNRKMRDAGY 903
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 123/505 (24%), Positives = 221/505 (43%), Gaps = 26/505 (5%)
Query: 26 IVDHTPTTFTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHY----PPRIALRV 81
+ + P +F GH R H+R+++ +D L LI Y A +V
Sbjct: 1 MTNCVPLSFVQSCVGH--RGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKV 58
Query: 82 FHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVC--FRSK 139
F + N + I+ + G D+ + N + F +L+ C S
Sbjct: 59 FDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
Query: 140 DARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSL 199
Q+H + K+ Y D VSN L+++Y + +V +A F +I ++ V+ W S+
Sbjct: 119 GILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVS-WNSI 177
Query: 200 ITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDD 259
I+ Y+Q+G ++F M RP T S+++ SL E V L +++
Sbjct: 178 ISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSL----TEPDVRLLEQIMCT 233
Query: 260 STSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCP 319
+G V + LV F K G++ +R+ F+++ R V N ++ V+
Sbjct: 234 IQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMET---RNAVTLNGLMVGLVRQKWG 290
Query: 320 VEGLSLFRIMVKEGTTRP-NHVTMVSVL---SACAQIGDLSLGKWVHEYLISIGHKGNIG 375
E LF M P ++V ++S S ++G L G+ VH ++I+ G +
Sbjct: 291 EEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVG-LKKGREVHGHVITTGL---VD 346
Query: 376 SNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKM 435
+ L++MY+KCG + A+ VF KD V +N+MI GL NG +A+ + M
Sbjct: 347 FMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSM 406
Query: 436 PEFGLQPNAGTFLGALSACSHSGFLERGRQIF-RDMSFSTSLTLEHYACYIDLLARVGCI 494
+ P + T + +LS+C+ + + G+QI + L + + L A G +
Sbjct: 407 RRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYL 466
Query: 495 EEAIEVVTSMPFKPNNFVWGALLGG 519
E ++ +SMP + + W +++G
Sbjct: 467 NECRKIFSSMP-EHDQVSWNSIIGA 490
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 167/582 (28%), Positives = 296/582 (50%), Gaps = 56/582 (9%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQG 104
Q HA G DN+L T L+ Y A VF + ++ +N II +QG
Sbjct: 295 QSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQG 354
Query: 105 HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSN 164
V + ++ L + T + L+ R+++ + ++V + + + +D +++
Sbjct: 355 LVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLAS 414
Query: 165 GLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNL 224
++ +YA+ ++V A+KVFD ++ ++ W +L+ YA+SG E L+LF+ M + +
Sbjct: 415 TVMDMYAK-CGSIVDAKKVFDSTVEK-DLILWNTLLAAYAESGLSGEALRLFYGMQLEGV 472
Query: 225 RPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGN 284
P T W N +++ L + G
Sbjct: 473 PPNVIT------------------W----------------------NLIILSLL-RNGQ 491
Query: 285 VEKSRERFDRISAAGK-RGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMV 343
V+++++ F ++ ++G ++ W M++ VQ+GC E + R M +E RPN ++
Sbjct: 492 VDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKM-QESGLRPNAFSIT 550
Query: 344 SVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEH 403
LSACA + L +G+ +H Y+I ++ S + TSL+DMY+KCG +++A++VF
Sbjct: 551 VALSACAHLASLHIGRTIHGYIIRNLQHSSLVS---IETSLVDMYAKCGDINKAEKVFGS 607
Query: 404 AVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERG 463
+ ++ L NAMI A+ G ++A+ L+ + GL+P+ T LSAC+H+G + +
Sbjct: 608 KLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQA 667
Query: 464 RQIFRDMSFSTSLT--LEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCL 521
+IF D+ S+ LEHY +DLLA G E+A+ ++ MPFKP+ + +L+ C
Sbjct: 668 IEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCN 727
Query: 522 LHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGS 581
+ EL +S++L+E +P +SG YV ++NA A + W++V +R M+ KG+KK+PG
Sbjct: 728 KQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGC 787
Query: 582 SWISVDGV--VHEFLVGYLSHPQIEGIYLTLTGLAKHMKAPS 621
SWI + G VH F+ +H +I I + L L M S
Sbjct: 788 SWIQITGEEGVHVFVANDKTHTRINEIQMMLALLLYDMGTGS 829
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 151/504 (29%), Positives = 255/504 (50%), Gaps = 31/504 (6%)
Query: 31 PTTFTNLLQGHIPRSHL---LQIHARIFQLGAH--QDNLLATRLIGHYPPRIALRV---- 81
P + +LQG + L QIHARI + G ++ + T+L+ Y AL +
Sbjct: 70 PEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVL 129
Query: 82 FHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDA 141
F L N+F + AII V G F ++ + P++F + K C K +
Sbjct: 130 FSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWS 189
Query: 142 RCAEQVHAHIQKMGYLNDPSVSNGLVAVYAR-GFRNVVFARKVFDEIPDRSEVTCWTSLI 200
R VH ++ K G + V++ L +Y + G + A KVFDEIPDR+ V W +L+
Sbjct: 190 RFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLD--DASKVFDEIPDRNAVA-WNALM 246
Query: 201 TGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDS 260
GY Q+G EE ++LF M +Q + P T+ + LSA +++ + + + ++
Sbjct: 247 VGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIA------ 300
Query: 261 TSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPV 320
NG + + T L+ + K G +E + FDR+ ++ VV WN +IS YVQ G
Sbjct: 301 IVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMF---EKDVVTWNLIISGYVQQGLVE 357
Query: 321 EGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQIL 380
+ + + ++M E + + VT+ +++SA A+ +L LGK V Y I + + S+ +L
Sbjct: 358 DAIYMCQLMRLE-KLKYDCVTLATLMSAAARTENLKLGKEVQCYCI----RHSFESDIVL 412
Query: 381 ATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGL 440
A++++DMY+KCG + AK+VF+ V KD++L+N ++ A +G +ALRLFY M G+
Sbjct: 413 ASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGV 472
Query: 441 QPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSL-TLEHYACYIDLLARVGCIEEAIE 499
PN T+ + + +G ++ + +F M S + L + ++ + + GC EEAI
Sbjct: 473 PPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAIL 532
Query: 500 VVTSMP---FKPNNFVWGALLGGC 520
+ M +PN F L C
Sbjct: 533 FLRKMQESGLRPNAFSITVALSAC 556
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 162/354 (45%), Gaps = 30/354 (8%)
Query: 185 DEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEIS 244
DE T + ++ ++G +E L L M +NLR + +L C
Sbjct: 27 DEQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCV----- 81
Query: 245 KIERWVYFLSELIDDSTSNGE--SCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRG 302
ER + ++ NG+ + ++ + T LV + K +E + F ++ R
Sbjct: 82 -YERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRV---RN 137
Query: 303 VVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVH 362
V W A+I + G EG + + + E P++ + +V AC + G+ VH
Sbjct: 138 VFSWAAIIGVKCRIGL-CEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVH 196
Query: 363 EYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVN 422
Y++ G + + +A+SL DMY KCG LD A +VF+ ++ V +NA+++G N
Sbjct: 197 GYVVKSGLEDCV----FVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQN 252
Query: 423 GEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQ-----IFRDMSFSTSL- 476
G+ E+A+RLF M + G++P T LSA ++ G +E G+Q I M L
Sbjct: 253 GKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILG 312
Query: 477 -TLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELA 529
+L ++ C +VG IE A E+V F+ + W ++ G + VE A
Sbjct: 313 TSLLNFYC------KVGLIEYA-EMVFDRMFEKDVVTWNLIISGYVQQGLVEDA 359
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 159/547 (29%), Positives = 275/547 (50%), Gaps = 23/547 (4%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
A +VF + N+ + +I + G F D+ + FT S + C
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRN--VVFARKVFDEIPDRSEVTC 195
++ +Q+H+ + G ++D S LV +YA+ + V RKVFD + D S V
Sbjct: 282 LENLSLGKQLHSWAIRSGLVDDVECS--LVDMYAKCSADGSVDDCRKVFDRMEDHS-VMS 338
Query: 196 WTSLITGYAQSGH-GEEVLQLFHMMVRQ-NLRPQNDTMVSVLSACSSLEISKIERWVYFL 253
WT+LITGY ++ + E + LF M+ Q ++ P + T S AC +L ++ +
Sbjct: 339 WTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGK----- 393
Query: 254 SELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAY 313
+++ + G + + SV ++ +F K +E ++ F+ +S ++ +V +N +
Sbjct: 394 -QVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLS---EKNLVSYNTFLDGT 449
Query: 314 VQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGN 373
++ + L + E + T S+LS A +G + G+ +H ++ +G
Sbjct: 450 CRNLNFEQAFKLLS-EITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLG---- 504
Query: 374 IGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFY 433
+ NQ + +LI MYSKCG +D A VF +++V+ + +MI G A +G L F
Sbjct: 505 LSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFN 564
Query: 434 KMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLT--LEHYACYIDLLARV 491
+M E G++PN T++ LSACSH G + G + F M + +EHYAC +DLL R
Sbjct: 565 QMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRA 624
Query: 492 GCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLA 551
G + +A E + +MPF+ + VW LG C +HS EL + +++++E+DP Y+ L+
Sbjct: 625 GLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLS 684
Query: 552 NALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLT 611
N A +W + + +R +M+E+ + K+ G SWI V +H+F VG +HP IY L
Sbjct: 685 NIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELD 744
Query: 612 GLAKHMK 618
L +K
Sbjct: 745 RLITEIK 751
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 139/527 (26%), Positives = 233/527 (44%), Gaps = 43/527 (8%)
Query: 33 TFTNLLQGHI-PRSHLLQ--IHARIFQLGAHQDNLLATRLIGHYPPR----IALRVFHYL 85
TF++LL+ I R L +HAR+ + D++L LI Y A VF +
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 86 H---NPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDAR 142
++ ++A++ G +F + L PND+ ++ +++ C S
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 143 CAEQVHAHIQKMGYL-NDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLIT 201
+ K G+ +D V L+ ++ +G + A KVFD++ + + VT WT +IT
Sbjct: 184 VGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVT-WTLMIT 242
Query: 202 GYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEI----SKIERWVYFLSELI 257
Q G E ++ F MV T+ SV SAC+ LE ++ W S L+
Sbjct: 243 RCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWA-IRSGLV 301
Query: 258 DDSTSNGESCHDSVNTVLVYLFGKW---GNVEKSRERFDRISAAGKRGVVPWNAMISAYV 314
DD V LV ++ K G+V+ R+ FDR+ V+ W A+I+ Y+
Sbjct: 302 DD-----------VECSLVDMYAKCSADGSVDDCRKVFDRME---DHSVMSWTALITGYM 347
Query: 315 QD-GCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGN 373
++ E ++LF M+ +G PNH T S AC + D +GK V + K
Sbjct: 348 KNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQV----LGQAFKRG 403
Query: 374 IGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFY 433
+ SN +A S+I M+ K R++ A+ FE K++V +N + G N E A +L
Sbjct: 404 LASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLS 463
Query: 434 KMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEHYAC--YIDLLARV 491
++ E L +A TF LS ++ G + +G QI + L+ C I + ++
Sbjct: 464 EITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQV-VKLGLSCNQPVCNALISMYSKC 522
Query: 492 GCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVE 538
G I+ A V M + N W +++ G H E +++E
Sbjct: 523 GSIDTASRVFNFMENR-NVISWTSMITGFAKHGFAIRVLETFNQMIE 568
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 147/326 (45%), Gaps = 17/326 (5%)
Query: 199 LITGYAQSGHGEEVLQLFHMMVRQNLRPQND-TMVSVLSACSSLEISKIERWVYFLSELI 257
LI + +G + +M R +RP + T S+L +C ++ + V+ + LI
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVH--ARLI 89
Query: 258 DDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDG 317
+ ++S L+ L+ K G+ K+ + F+ + GKR VV W+AM++ Y +G
Sbjct: 90 EFDIEPDSVLYNS----LISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNG 145
Query: 318 CPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSN 377
++ + +F ++ G PN +V+ AC+ + +G+ +L+ GH S+
Sbjct: 146 RELDAIKVFVEFLELGLV-PNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGH---FESD 201
Query: 378 QILATSLIDMYSKC-GRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMP 436
+ SLIDM+ K + A +VF+ +VV + MI G +A+R F M
Sbjct: 202 VCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMV 261
Query: 437 EFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEHYACYIDLLARV---GC 493
G + + T SAC+ L G+Q+ + + L + +D+ A+ G
Sbjct: 262 LSGFESDKFTLSSVFSACAELENLSLGKQL-HSWAIRSGLVDDVECSLVDMYAKCSADGS 320
Query: 494 IEEAIEVVTSMPFKPNNFVWGALLGG 519
+++ +V M + W AL+ G
Sbjct: 321 VDDCRKVFDRME-DHSVMSWTALITG 345
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 172/582 (29%), Positives = 300/582 (51%), Gaps = 34/582 (5%)
Query: 49 QIHARIFQLGAHQDNL-LATRLIGHYP-----PRIALRVFHYLHNPNIFPFNAIIRVLAE 102
+IHA + + H L + LI Y P+ A R+ ++N ++ +N++I+ +
Sbjct: 305 EIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQ-AERILRQMNNADVVTWNSLIKGYVQ 363
Query: 103 QGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSV 162
F+D+ ++ + + ++ R + ++HA++ K G+ ++ V
Sbjct: 364 NLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQV 423
Query: 163 SNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQ 222
N L+ +Y++ R F + D+ ++ WT++I GYAQ+ E L+LF + ++
Sbjct: 424 GNTLIDMYSKCNLTCYMGR-AFLRMHDKDLIS-WTTVIAGYAQNDCHVEALELFRDVAKK 481
Query: 223 NLRPQNDTMVSVLSACSSLEISKIERWVY--FLSELIDDSTSNGESCHDSVNTVLVYLFG 280
+ + S+L A S L+ I + ++ L + + D+ E LV ++G
Sbjct: 482 RMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNE---------LVDVYG 532
Query: 281 KWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHV 340
K N+ + F+ I + VV W +MIS+ +G E + LFR MV+ G + + V
Sbjct: 533 KCRNMGYATRVFESIKG---KDVVSWTSMISSSALNGNESEAVELFRRMVETGLS-ADSV 588
Query: 341 TMVSVLSACAQIGDLSLGKWVHEYLISIGH--KGNIGSNQILATSLIDMYSKCGRLDRAK 398
++ +LSA A + L+ G+ +H YL+ G +G+I A +++DMY+ CG L AK
Sbjct: 589 ALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSI------AVAVVDMYACCGDLQSAK 642
Query: 399 EVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSG 458
VF+ K ++ + +MI ++G G+ A+ LF KM + P+ +FL L ACSH+G
Sbjct: 643 AVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAG 702
Query: 459 FLERGRQIFRDMSFSTSLTL--EHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGAL 516
L+ GR + M L EHY C +D+L R C+ EA E V M +P VW AL
Sbjct: 703 LLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCAL 762
Query: 517 LGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIK 576
L C HS E+ + ++RL+E++P + G V+++N A +WNDV +R +M+ G++
Sbjct: 763 LAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGME 822
Query: 577 KQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMK 618
K PG SWI +DG VH+F SHP+ + IY L+ + + ++
Sbjct: 823 KHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLE 864
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 196/389 (50%), Gaps = 19/389 (4%)
Query: 49 QIHARIFQ-LGAHQDNLLATRLIGHYPPRIAL----RVFHYLHNPNIFPFNAIIRVLAEQ 103
Q+H+RIF+ + + + LA +L+ Y +L +VF + + F +N +I
Sbjct: 101 QLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSN 160
Query: 104 GHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVS 163
G + +L+ +++ + +F LLK C + +D R ++H+ + K+GY + +
Sbjct: 161 GEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIV 220
Query: 164 NGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQN 223
N LV++YA+ ++ AR++FD ++ + W S+++ Y+ SG E L+LF M
Sbjct: 221 NALVSMYAKN-DDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTG 279
Query: 224 LRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWG 283
P + T+VS L+AC +K+ + ++ + ++ ST + E V L+ ++ + G
Sbjct: 280 PAPNSYTIVSALTACDGFSYAKLGKEIH--ASVLKSSTHSSEL---YVCNALIAMYTRCG 334
Query: 284 NVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMV 343
+ ++ +++ A VV WN++I YVQ+ E L F M+ G + + V+M
Sbjct: 335 KMPQAERILRQMNNA---DVVTWNSLIKGYVQNLMYKEALEFFSDMIAAG-HKSDEVSMT 390
Query: 344 SVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEH 403
S+++A ++ +L G +H Y+I G N+ + +LIDMYSKC F
Sbjct: 391 SIIAASGRLSNLLAGMELHAYVIKHGWDSNLQ----VGNTLIDMYSKCNLTCYMGRAFLR 446
Query: 404 AVSKDVVLFNAMIMGLAVNGEGEDALRLF 432
KD++ + +I G A N +AL LF
Sbjct: 447 MHDKDLISWTTVIAGYAQNDCHVEALELF 475
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 159/333 (47%), Gaps = 25/333 (7%)
Query: 127 TFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPS-----VSNGLVAVYARGFRNVVFAR 181
F+++L++C + + Q+H+ I K PS ++ LV +Y + ++ A
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFK----TFPSFELDFLAGKLVFMYGK-CGSLDDAE 136
Query: 182 KVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSL 241
KVFDE+PDR+ W ++I Y +G L L+ M + + + ++L AC+ L
Sbjct: 137 KVFDEMPDRTAFA-WNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKL 195
Query: 242 EISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKR 301
R + SEL G + LV ++ K ++ +R FD G
Sbjct: 196 ------RDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGD- 248
Query: 302 GVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWV 361
V WN+++S+Y G +E L LFR M G PN T+VS L+AC LGK +
Sbjct: 249 -AVLWNSILSSYSTSGKSLETLELFREMHMTGPA-PNSYTIVSALTACDGFSYAKLGKEI 306
Query: 362 HEYLISIGHKGNIGSNQI-LATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLA 420
H ++ K + S+++ + +LI MY++CG++ +A+ + + DVV +N++I G
Sbjct: 307 HASVL----KSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYV 362
Query: 421 VNGEGEDALRLFYKMPEFGLQPNAGTFLGALSA 453
N ++AL F M G + + + ++A
Sbjct: 363 QNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 128/248 (51%), Gaps = 12/248 (4%)
Query: 275 LVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGT 334
LV+++GK G+++ + + FD + R WN MI AYV +G P L+L+ M EG
Sbjct: 122 LVFMYGKCGSLDDAEKVFDEMP---DRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGV 178
Query: 335 TRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRL 394
+ ++L ACA++ D+ G +H L+ +G+ S + +L+ MY+K L
Sbjct: 179 PL-GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYH----STGFIVNALVSMYAKNDDL 233
Query: 395 DRAKEVFEHAVSK-DVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSA 453
A+ +F+ K D VL+N+++ + +G+ + L LF +M G PN+ T + AL+A
Sbjct: 234 SAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTA 293
Query: 454 CSHSGFLERGRQIFRDMSFSTSLTLEHYAC--YIDLLARVGCIEEAIEVVTSMPFKPNNF 511
C + + G++I + S++ + E Y C I + R G + +A ++ M +
Sbjct: 294 CDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVV 352
Query: 512 VWGALLGG 519
W +L+ G
Sbjct: 353 TWNSLIKG 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 345 VLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHA 404
VL C + +S G+ +H + + LA L+ MY KCG LD A++VF+
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFEL---DFLAGKLVFMYGKCGSLDDAEKVFDEM 142
Query: 405 VSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGR 464
+ +N MI NGE AL L++ M G+ +F L AC+ + G
Sbjct: 143 PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGS 202
Query: 465 QI 466
++
Sbjct: 203 EL 204
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 155/462 (33%), Positives = 254/462 (54%), Gaps = 20/462 (4%)
Query: 162 VSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGH-GEEVLQLFHMMV 220
+ + LV Y R +V A K+FDE+P+R V+ W SLI+GY+ G+ G+ L MM+
Sbjct: 68 IGDQLVGCYLRLGHDVC-AEKLFDEMPERDLVS-WNSLISGYSGRGYLGKCFEVLSRMMI 125
Query: 221 RQ-NLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLF 279
+ RP T +S++SAC + R ++ L G V + +
Sbjct: 126 SEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLV------MKFGVLEEVKVVNAFINWY 179
Query: 280 GKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNH 339
GK G++ S + F+ +S + +V WN MI ++Q+G +GL+ F + + G P+
Sbjct: 180 GKTGDLTSSCKLFEDLSI---KNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGH-EPDQ 235
Query: 340 VTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKE 399
T ++VL +C +G + L + +H ++ G GN + + T+L+D+YSK GRL+ +
Sbjct: 236 ATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGN----KCITTALLDLYSKLGRLEDSST 291
Query: 400 VFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGF 459
VF S D + + AM+ A +G G DA++ F M +G+ P+ TF L+ACSHSG
Sbjct: 292 VFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGL 351
Query: 460 LERGRQIFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALL 517
+E G+ F MS + L+HY+C +DLL R G +++A ++ MP +P++ VWGALL
Sbjct: 352 VEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALL 411
Query: 518 GGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKK 577
G C ++ +L + ++RL E++P YVML+N ++ W D S +R M++KG+ +
Sbjct: 412 GACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVR 471
Query: 578 QPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMKA 619
G S+I +H+F+VG SHP+ E I L + K MK+
Sbjct: 472 ASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKS 513
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 102/465 (21%), Positives = 201/465 (43%), Gaps = 62/465 (13%)
Query: 1 MLPLSLHFTQKFKHCYLLPFRSSCSIVDHTPTTFTNLLQG-----HIPRSHLLQIHARIF 55
M+ +++ KF+ Y F S S V ++L+ I LL H ++
Sbjct: 1 MIKANVYSCSKFRFLYRRRFLSQSSFVHSLDANVSSLIAAVKSCVSIELCRLL--HCKVV 58
Query: 56 QLGAHQDNLLATRLIGHY----PPRIALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFS 111
+ +++ + +L+G Y A ++F + ++ +N++I + +G++ F
Sbjct: 59 KSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFE 118
Query: 112 LFNDLKHRVLA--PNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAV 169
+ + + + PN+ TF ++ C +H + K G L + V N +
Sbjct: 119 VLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINW 178
Query: 170 YARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQND 229
Y + ++ + K+F+++ ++ V+ W ++I + Q+G E+ L F+M R P
Sbjct: 179 YGKT-GDLTSSCKLFEDLSIKNLVS-WNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQA 236
Query: 230 TMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSR 289
T ++VL +C + + ++ + ++ LI +G C + T L+ L+ K G +E S
Sbjct: 237 TFLAVLRSCEDMGVVRLAQGIH---GLIMFGGFSGNKC---ITTALLDLYSKLGRLEDSS 290
Query: 290 ERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSAC 349
F I++ + W AM++AY G + + F +MV G + P+HVT +L+AC
Sbjct: 291 TVFHEITSPDS---MAWTAMLAAYATHGFGRDAIKHFELMVHYGIS-PDHVTFTHLLNAC 346
Query: 350 AQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDV 409
+ G + GK E ++ Y RLD
Sbjct: 347 SHSGLVEEGKHYFE-------------------TMSKRYRIDPRLDH------------- 374
Query: 410 VLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSAC 454
++ M+ L +G +DA L +MP ++P++G + L AC
Sbjct: 375 --YSCMVDLLGRSGLLQDAYGLIKEMP---MEPSSGVWGALLGAC 414
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 176/577 (30%), Positives = 286/577 (49%), Gaps = 24/577 (4%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQG 104
QIH + ++G H D + T L+ Y A VF + + + +NA++ AE
Sbjct: 293 QIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAEND 352
Query: 105 HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSN 164
+ LF ++ + + P+ FT S ++ C + VHA + K + ++ +
Sbjct: 353 YGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIES 412
Query: 165 GLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQN- 223
L+ +Y++ + A VF + ++ ++ W SLI+G ++G +E L++F M +
Sbjct: 413 ALLTLYSKCGCDPD-AYLVFKSMEEK-DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDD 470
Query: 224 -LRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKW 282
L+P +D M SV +AC+ LE + V+ G + V + L+ L+ K
Sbjct: 471 SLKPDSDIMTSVTNACAGLEALRFGLQVH------GSMIKTGLVLNVFVGSSLIDLYSKC 524
Query: 283 GNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTM 342
G E + + F +S +V WN+MIS Y ++ P + LF +M+ +G P+ V++
Sbjct: 525 GLPEMALKVFTSMST---ENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIF-PDSVSI 580
Query: 343 VSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFE 402
SVL A + L GK +H Y + +G I S+ L +LIDMY KCG A+ +F+
Sbjct: 581 TSVLVAISSTASLLKGKSLHGYTLRLG----IPSDTHLKNALIDMYVKCGFSKYAENIFK 636
Query: 403 HAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLER 462
K ++ +N MI G +G+ AL LF +M + G P+ TFL +SAC+HSGF+E
Sbjct: 637 KMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEE 696
Query: 463 GRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGC 520
G+ IF M + +EHYA +DLL R G +EEA + +MP + ++ +W LL
Sbjct: 697 GKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSAS 756
Query: 521 LLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPG 580
H VEL +++L+ ++P YV L N N+ + L M+EKG+ KQPG
Sbjct: 757 RTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPG 816
Query: 581 SSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHM 617
SWI V + F G S P I+ L L +M
Sbjct: 817 CSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNM 853
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 133/505 (26%), Positives = 229/505 (45%), Gaps = 37/505 (7%)
Query: 33 TFTNLLQGHIPRSHL---LQIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYL 85
TF +LL+ ++L IH + LG D +AT L+ Y A++VF
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 86 HNP-------NIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRS 138
++ +N++I + F + + P+ F+ S ++ V +
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 139 KDARCAE--QVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCW 196
+ R E Q+H + + D + L+ +Y + F + A +VF EI D+S V W
Sbjct: 182 GNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFK-FGLSIDAWRVFVEIEDKSNVVLW 240
Query: 197 TSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSEL 256
+I G+ SG E L L+ + +++ + + L ACS E S R ++
Sbjct: 241 NVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHC---- 296
Query: 257 IDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQD 316
D G V T L+ ++ K G V ++ F S + + WNAM++AY ++
Sbjct: 297 --DVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVF---SCVVDKRLEIWNAMVAAYAEN 351
Query: 317 GCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGS 376
L LF M ++ + P+ T+ +V+S C+ +G + GK VH L K I S
Sbjct: 352 DYGYSALDLFGFM-RQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELF----KRPIQS 406
Query: 377 NQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMP 436
+ ++L+ +YSKCG A VF+ KD+V + ++I GL NG+ ++AL++F M
Sbjct: 407 TSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMK 466
Query: 437 --EFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEHY--ACYIDLLARVG 492
+ L+P++ +AC+ L G Q+ M T L L + + IDL ++ G
Sbjct: 467 DDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSM-IKTGLVLNVFVGSSLIDLYSKCG 525
Query: 493 CIEEAIEVVTSMPFKPNNFVWGALL 517
E A++V TSM N W +++
Sbjct: 526 LPEMALKVFTSMS-TENMVAWNSMI 549
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 210/437 (48%), Gaps = 27/437 (6%)
Query: 39 QGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHY----PPRIALRVFHYLHNP-NIFPF 93
+G+ R QIH + + D+ L T LI Y A RVF + + N+ +
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLW 240
Query: 94 NAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQK 153
N +I G L+ K+ + +F+ L C +S+++ Q+H + K
Sbjct: 241 NVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK 300
Query: 154 MGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVL 213
MG NDP V L+++Y++ V A VF + D+ + W +++ YA++ +G L
Sbjct: 301 MGLHNDPYVCTSLLSMYSK-CGMVGEAETVFSCVVDK-RLEIWNAMVAAYAENDYGYSAL 358
Query: 214 QLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELID---DSTSNGESCHDS 270
LF M ++++ P + T+ +V+S CS L + + V+ +EL STS +
Sbjct: 359 DLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVH--AELFKRPIQSTS-------T 409
Query: 271 VNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMV 330
+ + L+ L+ K G + F + ++ +V W ++IS ++G E L +F M
Sbjct: 410 IESALLTLYSKCGCDPDAYLVFKSME---EKDMVAWGSLISGLCKNGKFKEALKVFGDMK 466
Query: 331 KEGTT-RPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYS 389
+ + +P+ M SV +ACA + L G VH +I G N+ + +SLID+YS
Sbjct: 467 DDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNV----FVGSSLIDLYS 522
Query: 390 KCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLG 449
KCG + A +VF ++++V +N+MI + N E ++ LF M G+ P++ +
Sbjct: 523 KCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITS 582
Query: 450 ALSACSHSGFLERGRQI 466
L A S + L +G+ +
Sbjct: 583 VLVAISSTASLLKGKSL 599
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 212/464 (45%), Gaps = 35/464 (7%)
Query: 94 NAIIRVLAEQGHVSHVFSLFNDLKHRVLAP---NDFTFSFLLKVCFRSKDARCAEQVHAH 150
N+ IR L ++G L++ KH +P + FTF LLK C + + +H
Sbjct: 28 NSGIRALIQKGEYLQALHLYS--KHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 151 IQKMGYLNDPSVSNGLVAVYAR-GFRNVVFARKVFDEIPDRS------EVTCWTSLITGY 203
+ +G+ DP ++ LV +Y + GF + +A +VFD +VT W S+I GY
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLD--YAVQVFDGWSQSQSGVSARDVTVWNSMIDGY 143
Query: 204 AQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSA-CSSLEISKIERWVYFLSELIDDSTS 262
+ +E + F M+ +RP ++ V+S C + E ++
Sbjct: 144 FKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEG-----KQIHGFMLR 198
Query: 263 NGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEG 322
N + T L+ ++ K+G + F I K VV WN MI + G
Sbjct: 199 NSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIE--DKSNVVLWNVMIVGFGGSGICESS 256
Query: 323 LSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILAT 382
L L+ ++ K + + + L AC+Q + G+ +H ++ +G + ++ + T
Sbjct: 257 LDLY-MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMG----LHNDPYVCT 311
Query: 383 SLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQP 442
SL+ MYSKCG + A+ VF V K + ++NAM+ A N G AL LF M + + P
Sbjct: 312 SLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLP 371
Query: 443 NAGTFLGALSACSHSGFLERGR----QIFRDMSFSTSLTLEHYACYIDLLARVGCIEEAI 498
++ T +S CS G G+ ++F+ STS T+E + + L ++ GC +A
Sbjct: 372 DSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTS-TIE--SALLTLYSKCGCDPDAY 428
Query: 499 EVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPT 542
V SM K + WG+L+ G + + + A +V + + D +
Sbjct: 429 LVFKSMEEK-DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDS 471
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 122/258 (47%), Gaps = 23/258 (8%)
Query: 307 NAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLI 366
N+ I A +Q G ++ L L+ + T S+L AC+ + +LS GK +H ++
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVV 87
Query: 367 SIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFE-------HAVSKDVVLFNAMIMGL 419
+G + + +ATSL++MY KCG LD A +VF+ ++DV ++N+MI G
Sbjct: 88 VLGWR----YDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGY 143
Query: 420 AVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSA-CSHSGF-LERGRQIFRDMSFSTSLT 477
++ + F +M FG++P+A + +S C F E G+QI M SL
Sbjct: 144 FKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFM-LRNSLD 202
Query: 478 LEHY--ACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALL----GGCLLHSRVE---L 528
+ + ID+ + G +A V + K N +W ++ G + S ++ L
Sbjct: 203 TDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYML 262
Query: 529 AQEVSKRLVEVDPTSSGG 546
A+ S +LV T + G
Sbjct: 263 AKNNSVKLVSTSFTGALG 280
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 160/540 (29%), Positives = 287/540 (53%), Gaps = 22/540 (4%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQG 104
+IH ++ ++ + DN++ T L+ Y + A +VF+ + N+ + ++I +
Sbjct: 163 KIHCQLVKVPSF-DNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKND 221
Query: 105 HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSN 164
LFN ++ + N++T+ L+ C + + H + K G +
Sbjct: 222 LCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVT 281
Query: 165 GLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNL 224
L+ +Y + ++ AR+VF+E ++ WT++I GY +G E L LF M +
Sbjct: 282 SLLDMYVK-CGDISNARRVFNE-HSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEI 339
Query: 225 RPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGN 284
+P T+ SVLS C +E ++ R V+ LS + +N V LV+++ K
Sbjct: 340 KPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN-------VANALVHMYAKCYQ 392
Query: 285 VEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVS 344
++ F+ S ++ +V WN++IS + Q+G E L LF M E T PN VT+ S
Sbjct: 393 NRDAKYVFEMES---EKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVT-PNGVTVAS 448
Query: 345 VLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHA 404
+ SACA +G L++G +H Y + +G + S+ + T+L+D Y+KCG A+ +F+
Sbjct: 449 LFSACASLGSLAVGSSLHAYSVKLGFLAS--SSVHVGTALLDFYAKCGDPQSARLIFDTI 506
Query: 405 VSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGR 464
K+ + ++AMI G G+ +L LF +M + +PN TF LSAC H+G + G+
Sbjct: 507 EEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGK 566
Query: 465 QIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLL 522
+ F M ++ + + +HY C +D+LAR G +E+A++++ MP +P+ +GA L GC +
Sbjct: 567 KYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGM 626
Query: 523 HSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSS 582
HSR +L + V K+++++ P + YV+++N ASD +WN +R M+++G+ K G S
Sbjct: 627 HSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHS 686
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 145/480 (30%), Positives = 227/480 (47%), Gaps = 26/480 (5%)
Query: 47 LLQIHARIFQLGAHQDNLLATRLIGHYP----PRIALRVFHYLHNPNIFPFNAIIRVLAE 102
L Q H + G D +AT+L+ Y + A VF + P+ + + ++R
Sbjct: 60 LRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCL 119
Query: 103 QGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSV 162
V L++ L +D FS LK C +D +++H + K+ D V
Sbjct: 120 NKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSF-DNVV 178
Query: 163 SNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQ 222
GL+ +YA+ + A KVF++I R+ V CWTS+I GY ++ EE L LF+ M
Sbjct: 179 LTGLLDMYAK-CGEIKSAHKVFNDITLRN-VVCWTSMIAGYVKNDLCEEGLVLFNRMREN 236
Query: 223 NLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKW 282
N+ T +++ AC+ L +W F L+ +G + T L+ ++ K
Sbjct: 237 NVLGNEYTYGTLIMACTKLSALHQGKW--FHGCLV----KSGIELSSCLVTSLLDMYVKC 290
Query: 283 GNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTM 342
G++ +R F+ S +V W AMI Y +G E LSLF+ M K +PN VT+
Sbjct: 291 GDISNARRVFNEHSHV---DLVMWTAMIVGYTHNGSVNEALSLFQKM-KGVEIKPNCVTI 346
Query: 343 VSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFE 402
SVLS C I +L LG+ VH I +G I + A +L+ MY+KC + AK VFE
Sbjct: 347 ASVLSGCGLIENLELGRSVHGLSIKVG----IWDTNV-ANALVHMYAKCYQNRDAKYVFE 401
Query: 403 HAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLER 462
KD+V +N++I G + NG +AL LF++M + PN T SAC+ G L
Sbjct: 402 MESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAV 461
Query: 463 GRQIFR---DMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGG 519
G + + F S ++ +D A+ G + A + ++ K N W A++GG
Sbjct: 462 GSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEK-NTITWSAMIGG 520
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 160/413 (38%), Gaps = 80/413 (19%)
Query: 253 LSELIDDSTSNGESCH-----------------------------------DSVNTVLVY 277
+ ELI ++G S H S+ T LV
Sbjct: 25 IKELILTEENDGSSLHYAASSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVS 84
Query: 278 LFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRP 337
L+G +G + +R FD+I + W M+ Y + VE + L+ +++K G R
Sbjct: 85 LYGFFGYTKDARLVFDQIP---EPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHG-FRY 140
Query: 338 NHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRA 397
+ + L AC ++ DL GK +H L+ + N ++ T L+DMY+KCG + A
Sbjct: 141 DDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDN-----VVLTGLLDMYAKCGEIKSA 195
Query: 398 KEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHS 457
+VF ++VV + +MI G N E+ L LF +M E + N T+ + AC+
Sbjct: 196 HKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKL 255
Query: 458 GFLERGR---------QIFRDMSFSTSLTLEHYAC--------------YIDLL------ 488
L +G+ I TSL + C ++DL+
Sbjct: 256 SALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMI 315
Query: 489 ---ARVGCIEEAIEVVTSMP---FKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPT 542
G + EA+ + M KPN ++L GC L +EL + V ++V
Sbjct: 316 VGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW 375
Query: 543 SSGGYVMLANALASDRQWNDVS-ALRLEMREKGIKKQPGSSWISVDGVVHEFL 594
+ L + A Q D +E + + S S +G +HE L
Sbjct: 376 DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEAL 428
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 258 bits (659), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 167/544 (30%), Positives = 283/544 (52%), Gaps = 29/544 (5%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
AL +F + ++ +N++I E G ++ LF+++ R + +++ ++ CFR
Sbjct: 85 ALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVV----SWTAMVNGCFR 140
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWT 197
S AE++ + + D + N +V Y + F V A K+F ++P ++ V WT
Sbjct: 141 SGKVDQAERLFYQMP----VKDTAAWNSMVHGYLQ-FGKVDDALKLFKQMPGKN-VISWT 194
Query: 198 SLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELI 257
++I G Q+ E L LF M+R ++ + V++AC++ + V+ L +
Sbjct: 195 TMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKL 254
Query: 258 DDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDG 317
G + V+ L+ + + SR+ FD V W A++S Y +
Sbjct: 255 ------GFLYEEYVSASLITFYANCKRIGDSRKVFDE---KVHEQVAVWTALLSGYSLNK 305
Query: 318 CPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSN 377
+ LS+F M++ + PN T S L++C+ +G L GK +H + +G + ++
Sbjct: 306 KHEDALSIFSGMLRN-SILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLG----LETD 360
Query: 378 QILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPE 437
+ SL+ MYS G ++ A VF K +V +N++I+G A +G G+ A +F +M
Sbjct: 361 AFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIR 420
Query: 438 FGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTS---LTLEHYACYIDLLARVGCI 494
+P+ TF G LSACSH GFLE+GR++F MS + ++HY C +D+L R G +
Sbjct: 421 LNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKL 480
Query: 495 EEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANAL 554
+EA E++ M KPN VW ALL C +HS V+ ++ + + +D SS YV+L+N
Sbjct: 481 KEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIY 540
Query: 555 ASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLA 614
AS +W++VS LR++M++ GI K+PGSSW+ + G HEF G P IY L L
Sbjct: 541 ASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSG--DQPHCSRIYEKLEFLR 598
Query: 615 KHMK 618
+ +K
Sbjct: 599 EKLK 602
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 189/391 (48%), Gaps = 42/391 (10%)
Query: 175 RNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSV 234
R + AR+VF+++P V+ +T +ITGY +S + L LF M +++ N +M+S
Sbjct: 49 RRIDEAREVFNQVPS-PHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWN-SMISG 106
Query: 235 LSACSSLEIS-KI-----ERWVYFLSELIDDSTSNGE-----------SCHDSVN-TVLV 276
C + + K+ ER V + +++ +G+ D+ +V
Sbjct: 107 CVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMV 166
Query: 277 YLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVK---EG 333
+ + ++G V+ + + F ++ + V+ W MI Q+ E L LF+ M++ +
Sbjct: 167 HGYLQFGKVDDALKLFKQMPG---KNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKS 223
Query: 334 TTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGR 393
T+RP V++ACA +G VH +I +G + ++ SLI Y+ C R
Sbjct: 224 TSRP----FTCVITACANAPAFHMGIQVHGLIIKLG----FLYEEYVSASLITFYANCKR 275
Query: 394 LDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSA 453
+ +++VF+ V + V ++ A++ G ++N + EDAL +F M + PN TF L++
Sbjct: 276 IGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNS 335
Query: 454 CSHSGFLERGRQIFRDMSFSTSLTLEHYA----CYIDLLARVGCIEEAIEVVTSMPFKPN 509
CS G L+ G+++ + L LE A + + + G + +A+ V + FK +
Sbjct: 336 CSALGTLDWGKEMH---GVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKS 391
Query: 510 NFVWGALLGGCLLHSRVELAQEVSKRLVEVD 540
W +++ GC H R + A + +++ ++
Sbjct: 392 IVSWNSIIVGCAQHGRGKWAFVIFGQMIRLN 422
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 182/584 (31%), Positives = 289/584 (49%), Gaps = 46/584 (7%)
Query: 49 QIHARIFQLGAHQDNLLATRLI-------GHYPPRIALRVFHYLHN--------PNIFPF 93
QIH R+ + G +++ L TR++ Y A VFH H + F +
Sbjct: 30 QIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVEDPFLW 89
Query: 94 NAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQK 153
NA+I+ + L + ++ + F+ S +LK C R + Q+H ++K
Sbjct: 90 NAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKK 149
Query: 154 MGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVL 213
G +D + N L+ +Y + + +R++FD +P R V+ + S+I GY + G
Sbjct: 150 TGLWSDLFLQNCLIGLYLK-CGCLGLSRQMFDRMPKRDSVS-YNSMIDGYVKCGLIVSAR 207
Query: 214 QLFHMMVRQ--NLRPQNDTMVSVLSACSSLEI-SKI-----ERWVYFLSELIDDSTSNGE 265
+LF +M + NL N + ++I SK+ E+ + + +ID +G
Sbjct: 208 ELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGR 267
Query: 266 -----------SCHDSVN-TVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAY 313
D V ++ + K G V ++ FD++ R VV +N+M++ Y
Sbjct: 268 IEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMP---HRDVVAYNSMMAGY 324
Query: 314 VQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGN 373
VQ+ +E L +F M KE P+ T+V VL A AQ+G LS +H Y++ +
Sbjct: 325 VQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVE--KQFY 382
Query: 374 IGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFY 433
+G L +LIDMYSKCG + A VFE +K + +NAMI GLA++G GE A +
Sbjct: 383 LGGK--LGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLL 440
Query: 434 KMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLT--LEHYACYIDLLARV 491
++ L+P+ TF+G L+ACSHSG ++ G F M + L+HY C +D+L+R
Sbjct: 441 QIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRS 500
Query: 492 GCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLA 551
G IE A ++ MP +PN+ +W L C H E + V+K L+ + YV+L+
Sbjct: 501 GSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLS 560
Query: 552 NALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLV 595
N AS W DV +R M+E+ I+K PG SWI +DG VHEF V
Sbjct: 561 NMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 174/555 (31%), Positives = 279/555 (50%), Gaps = 31/555 (5%)
Query: 45 SHLLQIHARIFQLGAHQDNLLATRLIGHY--PPRIALRVFHYLHNP----NIFPFNAIIR 98
+H Q+HA++ G + +L + L Y R+ + P N +N I+
Sbjct: 21 NHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILS 80
Query: 99 VLAEQGHV--SHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGY 156
++ S V L+N ++ + F F +K C +H K G
Sbjct: 81 GYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGL 140
Query: 157 LNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLF 216
D V+ LV +YA+ + A+KVFDEIP R+ V W L+ GY + EV +LF
Sbjct: 141 DKDDYVAPSLVEMYAQ-LGTMESAQKVFDEIPVRNSVL-WGVLMKGYLKYSKDPEVFRLF 198
Query: 217 HMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLS---ELIDDSTSNGESCHDSVNT 273
+M L T++ ++ AC ++ K+ + V+ +S ID S D +
Sbjct: 199 CLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQS--------DYLQA 250
Query: 274 VLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEG 333
++ ++ K ++ +R+ F+ + R VV W +IS + + VE LFR M++E
Sbjct: 251 SIIDMYVKCRLLDNARKLFE---TSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRE- 306
Query: 334 TTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGR 393
+ PN T+ ++L +C+ +G L GK VH Y+I G I + + TS IDMY++CG
Sbjct: 307 SILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNG----IEMDAVNFTSFIDMYARCGN 362
Query: 394 LDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSA 453
+ A+ VF+ ++V+ +++MI +NG E+AL F+KM + PN+ TF+ LSA
Sbjct: 363 IQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSA 422
Query: 454 CSHSGFLERGRQIFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNF 511
CSHSG ++ G + F M+ + EHYAC +DLL R G I EA + +MP KP
Sbjct: 423 CSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMAS 482
Query: 512 VWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMR 571
WGALL C +H V+LA E++++L+ ++P S YV+L+N A W V+ +R +M
Sbjct: 483 AWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMG 542
Query: 572 EKGIKKQPGSSWISV 586
KG +K G S V
Sbjct: 543 IKGYRKHVGQSATEV 557
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 183/393 (46%), Gaps = 19/393 (4%)
Query: 131 LLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPD- 189
LL + ++K +QVHA + G+ ++ + + L Y + R + FA F+ IP
Sbjct: 10 LLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNR-LDFATSSFNRIPCW 68
Query: 190 RSEVTCWTSLITGYAQSGHG--EEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIE 247
+ W ++++GY++S +VL L++ M R + +V + AC L + +
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 248 RWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWN 307
++ L + NG D V LV ++ + G +E +++ FD I R V W
Sbjct: 129 ILIHGL------AMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPV---RNSVLWG 179
Query: 308 AMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLIS 367
++ Y++ E LF +M G + +T++ ++ AC + +GK VH I
Sbjct: 180 VLMKGYLKYSKDPEVFRLFCLMRDTGLA-LDALTLICLVKACGNVFAGKVGKCVHGVSI- 237
Query: 368 IGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGED 427
+ I + L S+IDMY KC LD A+++FE +V ++VV++ +I G A +
Sbjct: 238 --RRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVE 295
Query: 428 ALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM-SFSTSLTLEHYACYID 486
A LF +M + PN T L +CS G L G+ + M + ++ +ID
Sbjct: 296 AFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFID 355
Query: 487 LLARVGCIEEAIEVVTSMPFKPNNFVWGALLGG 519
+ AR G I+ A V MP + N W +++
Sbjct: 356 MYARCGNIQMARTVFDMMP-ERNVISWSSMINA 387
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 183/578 (31%), Positives = 285/578 (49%), Gaps = 28/578 (4%)
Query: 42 IPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPPRIAL----RVFHYLHNPNIFPFNAII 97
I RS QI ++F L D L L+ Y L R+F + N + A+I
Sbjct: 220 IARSVHGQITRKMFDL----DETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMI 275
Query: 98 RVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAH-IQKMGY 156
F+++ + PN T +L C R + VH +++
Sbjct: 276 SSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELD 335
Query: 157 LNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLF 216
N S+S LV +YA + + V + DR+ + W SLI+ YA G + L LF
Sbjct: 336 PNYESLSLALVELYAECGK-LSDCETVLRVVSDRN-IVAWNSLISLYAHRGMVIQALGLF 393
Query: 217 HMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLV 276
MV Q ++P T+ S +SAC + + + + ++ +I S+ + V L+
Sbjct: 394 RQMVTQRIKPDAFTLASSISACENAGLVPLGKQIH--GHVIRTDVSD-----EFVQNSLI 446
Query: 277 YLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTR 336
++ K G+V+ + F++I R VV WN+M+ + Q+G VE +SLF M
Sbjct: 447 DMYSKSGSVDSASTVFNQIK---HRSVVTWNSMLCGFSQNGNSVEAISLFDYMY-HSYLE 502
Query: 337 PNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDR 396
N VT ++V+ AC+ IG L GKWVH LI G K + T+LIDMY+KCG L+
Sbjct: 503 MNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-----DLFTDTALIDMYAKCGDLNA 557
Query: 397 AKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSH 456
A+ VF S+ +V +++MI ++G A+ F +M E G +PN F+ LSAC H
Sbjct: 558 AETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGH 617
Query: 457 SGFLERGRQIFRDM-SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGA 515
SG +E G+ F M SF S EH+AC+IDLL+R G ++EA + MPF + VWG+
Sbjct: 618 SGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGS 677
Query: 516 LLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGI 575
L+ GC +H ++++ + + L ++ +G Y +L+N A + +W + LR M+ +
Sbjct: 678 LVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNL 737
Query: 576 KKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGL 613
KK PG S I +D V F G + Q + IY L L
Sbjct: 738 KKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNL 775
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 235/482 (48%), Gaps = 32/482 (6%)
Query: 49 QIHARIFQLGA-HQDNLLATRLIGHYP----PRIALRVFHYLHNPNIFPFNAIIRVLAEQ 103
Q+HA + G +D L T+LI Y P + VF P+ F + +I+
Sbjct: 19 QLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKC---- 74
Query: 104 GHVSHVFSLFNDLKHRVLAP----NDFTFSFLLKVCFRSKD-ARCAEQVHAHIQKMGYLN 158
H+ DL HR+++ + F F +L+ C S++ +VH I K G +
Sbjct: 75 NVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDD 134
Query: 159 DPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHM 218
D + L+ +Y + N+ A KVFD +P R ++ W++L++ ++G + L++F
Sbjct: 135 DAVIETSLLCMYGQT-GNLSDAEKVFDGMPVR-DLVAWSTLVSSCLENGEVVKALRMFKC 192
Query: 219 MVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYL 278
MV + P TM+SV+ C+ L +I R V+ T +++ L+ +
Sbjct: 193 MVDDGVEPDAVTMISVVEGCAELGCLRIARSVH------GQITRKMFDLDETLCNSLLTM 246
Query: 279 FGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPN 338
+ K G++ S F++I+ K+ V W AMIS+Y + + L F M+K G PN
Sbjct: 247 YSKCGDLLSSERIFEKIA---KKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSG-IEPN 302
Query: 339 HVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAK 398
VT+ SVLS+C IG + GK VH + + N S L+ +L+++Y++CG+L +
Sbjct: 303 LVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYES---LSLALVELYAECGKLSDCE 359
Query: 399 EVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSG 458
V +++V +N++I A G AL LF +M ++P+A T ++SAC ++G
Sbjct: 360 TVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAG 419
Query: 459 FLERGRQIFRDMSFSTSLTLEHYA-CYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALL 517
+ G+QI + T ++ E ID+ ++ G ++ A V + + + W ++L
Sbjct: 420 LVPLGKQIHGHV-IRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHR-SVVTWNSML 477
Query: 518 GG 519
G
Sbjct: 478 CG 479
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 182/602 (30%), Positives = 300/602 (49%), Gaps = 37/602 (6%)
Query: 33 TFTNLLQGHIPRSHLL----QIHARIFQLGAHQDNLLATRLIGHYPPRIAL----RVFHY 84
TFT+LL SH L Q H+ I + ++ + L+ Y AL ++F
Sbjct: 430 TFTSLLST-CAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFER 488
Query: 85 LHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCA 144
+ + + +N II + + S F LF + + + + LK C
Sbjct: 489 MCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG 548
Query: 145 EQVHAHIQKMGYLNDPSVSNGLVAVYAR-GFRNVVFARKVFDEIPDRSEVTCWTSLITGY 203
+QVH K G D + L+ +Y++ G + ARKVF +P+ S V +LI GY
Sbjct: 549 KQVHCLSVKCGLDRDLHTGSSLIDMYSKCGI--IKDARKVFSSLPEWS-VVSMNALIAGY 605
Query: 204 AQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDS-TS 262
+Q+ + EE + LF M+ + + P T +++ AC E + F ++ +S
Sbjct: 606 SQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPE--SLTLGTQFHGQITKRGFSS 662
Query: 263 NGESCHDSVNTVLVYLFGKWGNVEKSRER---FDRISAAGKRGVVPWNAMISAYVQDGCP 319
GE + + L G + N E F +S+ + +V W M+S + Q+G
Sbjct: 663 EGE-------YLGISLLGMYMNSRGMTEACALFSELSSP--KSIVLWTGMMSGHSQNGFY 713
Query: 320 VEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQI 379
E L ++ M +G P+ T V+VL C+ + L G+ +H + + H +++
Sbjct: 714 EEALKFYKEMRHDGVL-PDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHD----LDEL 768
Query: 380 LATSLIDMYSKCGRLDRAKEVFEHAVSK-DVVLFNAMIMGLAVNGEGEDALRLFYKMPEF 438
+ +LIDMY+KCG + + +VF+ + +VV +N++I G A NG EDAL++F M +
Sbjct: 769 TSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQS 828
Query: 439 GLQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEE 496
+ P+ TFLG L+ACSH+G + GR+IF M + ++H AC +DLL R G ++E
Sbjct: 829 HIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQE 888
Query: 497 AIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALAS 556
A + + + KP+ +W +LLG C +H + +++L+E++P +S YV+L+N AS
Sbjct: 889 ADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYAS 948
Query: 557 DRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKH 616
W +ALR MR++G+KK PG SWI V+ H F G SH +I I + L L
Sbjct: 949 QGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDL 1008
Query: 617 MK 618
MK
Sbjct: 1009 MK 1010
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 149/542 (27%), Positives = 237/542 (43%), Gaps = 97/542 (17%)
Query: 38 LQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPPR---IALRVFHYLHNPNIFPF- 93
+ GH+ SH QIH R+ ++ Q L +R + P+ +ALR+ +H+ ++
Sbjct: 33 IYGHVLPSHD-QIHQRLLEICLGQCKLFKSRKVFDEMPQRLALALRIGKAVHSKSLILGI 91
Query: 94 -------NAIIRVLAEQGHVSHVFSLFNDLKHRVLA------------------------ 122
NAI+ + A+ VS+ F+ L+ V A
Sbjct: 92 DSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSL 151
Query: 123 ------PNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRN 176
PN FTFS +L C R + Q+H + KMG + LV +YA+ R
Sbjct: 152 FENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDR- 210
Query: 177 VVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLS 236
+ AR+VF+ I D + V CWT L +GY ++G EE + +F M + RP + V+V
Sbjct: 211 ISDARRVFEWIVDPNTV-CWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTV-- 267
Query: 237 ACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRIS 296
+NT + + G ++ +R F +S
Sbjct: 268 ----------------------------------INTYI-----RLGKLKDARLLFGEMS 288
Query: 297 AAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLS 356
+ VV WN MIS + + GC + F M ++ + + T+ SVLSA + +L
Sbjct: 289 SPD---VVAWNVMISGHGKRGCETVAIEYFFNM-RKSSVKSTRSTLGSVLSAIGIVANLD 344
Query: 357 LGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMI 416
LG VH I +G + SN + +SL+ MYSKC +++ A +VFE K+ V +NAMI
Sbjct: 345 LGLVVHAEAIKLG----LASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMI 400
Query: 417 MGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSL 476
G A NGE + LF M G + TF LS C+ S LE G Q F + L
Sbjct: 401 RGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKL 459
Query: 477 TLEHYA--CYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSK 534
+ +D+ A+ G +E+A ++ M + +N W ++G + A ++ K
Sbjct: 460 AKNLFVGNALVDMYAKCGALEDARQIFERMCDR-DNVTWNTIIGSYVQDENESEAFDLFK 518
Query: 535 RL 536
R+
Sbjct: 519 RM 520
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 220/486 (45%), Gaps = 38/486 (7%)
Query: 48 LQIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQ 103
L +HA +LG + + + L+ Y A +VF L N +NA+IR A
Sbjct: 347 LVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHN 406
Query: 104 GHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVS 163
G V LF D+K +DFTF+ LL C S D Q H+ I K + V
Sbjct: 407 GESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVG 466
Query: 164 NGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQN 223
N LV +YA+ + AR++F+ + DR VT W ++I Y Q + E LF M
Sbjct: 467 NALVDMYAK-CGALEDARQIFERMCDRDNVT-WNTIIGSYVQDENESEAFDLFKRMNLCG 524
Query: 224 LRPQNDTMVSVLSACSSLEISKIERWVYFLSEL--IDDSTSNGESCHDSVNTVLVYLFGK 281
+ + S L AC+ + + V+ LS +D G S L+ ++ K
Sbjct: 525 IVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSS--------LIDMYSK 576
Query: 282 WGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVT 341
G ++ +R+ F S+ + VV NA+I+ Y Q+ E + LF+ M+ G P+ +T
Sbjct: 577 CGIIKDARKVF---SSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVN-PSEIT 631
Query: 342 MVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVF 401
+++ AC + L+LG H I +G + L SL+ MY + A +F
Sbjct: 632 FATIVEACHKPESLTLGTQFHG---QITKRGFSSEGEYLGISLLGMYMNSRGMTEACALF 688
Query: 402 -EHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFL 460
E + K +VL+ M+ G + NG E+AL+ + +M G+ P+ TF+ L CS L
Sbjct: 689 SELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSL 748
Query: 461 ERGRQIF-------RDMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVW 513
GR I D+ TS TL ID+ A+ G ++ + +V M + N W
Sbjct: 749 REGRAIHSLIFHLAHDLDELTSNTL------IDMYAKCGDMKGSSQVFDEMRRRSNVVSW 802
Query: 514 GALLGG 519
+L+ G
Sbjct: 803 NSLING 808
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 127/505 (25%), Positives = 218/505 (43%), Gaps = 85/505 (16%)
Query: 17 LLPFRSSCSIVDHTPTTFTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPP- 75
+ P + + SIV T TN+ G QIH + ++G +++ L+ Y
Sbjct: 156 IFPNKFTFSIVLSTCARETNVEFGR-------QIHCSMIKMGLERNSYCGGALVDMYAKC 208
Query: 76 -RI--ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLL 132
RI A RVF ++ +PN + + + G +F ++ P+ F ++
Sbjct: 209 DRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVI 268
Query: 133 KVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEI--PDR 190
R +G L D AR +F E+ PD
Sbjct: 269 NTYIR----------------LGKLKD--------------------ARLLFGEMSSPD- 291
Query: 191 SEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWV 250
V W +I+G+ + G ++ F M + +++ T+ SVLSA ++ ++ +
Sbjct: 292 --VVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGI--VANLDLGL 347
Query: 251 YFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMI 310
+E I G + + V + LV ++ K +E + + F+ A ++ V WNAMI
Sbjct: 348 VVHAEAI----KLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE---ALEEKNDVFWNAMI 400
Query: 311 SAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGH 370
Y +G + + LF M G + T S+LS CA DL +G H +I
Sbjct: 401 RGYAHNGESHKVMELFMDMKSSGYN-IDDFTFTSLLSTCAASHDLEMGSQFHSIII---- 455
Query: 371 KGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGE-DAL 429
K + N + +L+DMY+KCG L+ A+++FE +D V +N I+G V E E +A
Sbjct: 456 KKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNT-IIGSYVQDENESEAF 514
Query: 430 RLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIF---------RDMSFSTSLTLEH 480
LF +M G+ + L AC+H L +G+Q+ RD+ +SL
Sbjct: 515 DLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSL---- 570
Query: 481 YACYIDLLARVGCIEEAIEVVTSMP 505
ID+ ++ G I++A +V +S+P
Sbjct: 571 ----IDMYSKCGIIKDARKVFSSLP 591
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 168/560 (30%), Positives = 269/560 (48%), Gaps = 65/560 (11%)
Query: 47 LLQIHARIFQLGAHQDNLLATRLIGHYPPRI------ALRVFHYLHNPNIFPFNAIIRVL 100
L QIH + G D+ +LI H I A R+ P+ F FN ++R
Sbjct: 21 LTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLVRGY 80
Query: 101 AEQGHVSHVFSLFNDLKHR-VLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLND 159
+E + ++F ++ + + P+ F+F+F++K + R Q+H K G +
Sbjct: 81 SESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESH 140
Query: 160 PSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMM 219
V L+ +Y G V FARKVFDE+ + + W ++IT + ++F M
Sbjct: 141 LFVGTTLIGMYG-GCGCVEFARKVFDEM-HQPNLVAWNAVITACFRGNDVAGAREIFDKM 198
Query: 220 VRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLF 279
+ +N H S N +L +
Sbjct: 199 LVRN--------------------------------------------HTSWNVMLAG-Y 213
Query: 280 GKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNH 339
K G +E ++ F + R V W+ MI +G E FR + + G + PN
Sbjct: 214 IKAGELESAKRIFSEMP---HRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS-PNE 269
Query: 340 VTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKE 399
V++ VLSAC+Q G GK +H ++ G+ + N +LIDMYS+CG + A+
Sbjct: 270 VSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNN----ALIDMYSRCGNVPMARL 325
Query: 400 VFEHAVSKD-VVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSG 458
VFE K +V + +MI GLA++G+GE+A+RLF +M +G+ P+ +F+ L ACSH+G
Sbjct: 326 VFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAG 385
Query: 459 FLERGRQIFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGAL 516
+E G F +M + +EHY C +DL R G +++A + + MP P VW L
Sbjct: 386 LIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTL 445
Query: 517 LGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIK 576
LG C H +ELA++V +RL E+DP +SG V+L+NA A+ +W DV+++R M + IK
Sbjct: 446 LGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIK 505
Query: 577 KQPGSSWISVDGVVHEFLVG 596
K S + V +++F G
Sbjct: 506 KTTAWSLVEVGKTMYKFTAG 525
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 254 bits (650), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 162/585 (27%), Positives = 287/585 (49%), Gaps = 32/585 (5%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHYPPR----IALRVFHYLHNPNIFPFNAIIRVLAEQG 104
Q+H +LG ++ LI Y A VF + ++ +N++I +A+ G
Sbjct: 336 QVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNG 395
Query: 105 HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDA-RCAEQVHAHIQKMGYLNDPSVS 163
LF L L P+ +T + +LK + ++QVH H K+ ++D VS
Sbjct: 396 LEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVS 455
Query: 164 NGLVAVYARGF----RNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMM 219
L+ Y+R ++F R FD + W +++ GY QS G + L+LF +M
Sbjct: 456 TALIDAYSRNRCMKEAEILFERHNFD-------LVAWNAMMAGYTQSHDGHKTLKLFALM 508
Query: 220 VRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLF 279
+Q R + T+ +V C L + V+ + +G V++ ++ ++
Sbjct: 509 HKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYA------IKSGYDLDLWVSSGILDMY 562
Query: 280 GKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNH 339
K G++ ++ FD I V W MIS +++G +F M G P+
Sbjct: 563 VKCGDMSAAQFAFDSIPVPDD---VAWTTMISGCIENGEEERAFHVFSQMRLMGVL-PDE 618
Query: 340 VTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKE 399
T+ ++ A + + L G+ +H + + N ++ + TSL+DMY+KCG +D A
Sbjct: 619 FTIATLAKASSCLTALEQGRQIHANALKL----NCTNDPFVGTSLVDMYAKCGSIDDAYC 674
Query: 400 VFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGF 459
+F+ ++ +NAM++GLA +GEG++ L+LF +M G++P+ TF+G LSACSHSG
Sbjct: 675 LFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGL 734
Query: 460 LERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALL 517
+ + R M + +EHY+C D L R G +++A ++ SM + + ++ LL
Sbjct: 735 VSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLL 794
Query: 518 GGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKK 577
C + E + V+ +L+E++P S YV+L+N A+ +W+++ R M+ +KK
Sbjct: 795 AACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKK 854
Query: 578 QPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMKAPSH 622
PG SWI V +H F+V S+ Q E IY + + + +K +
Sbjct: 855 DPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGY 899
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 122/423 (28%), Positives = 203/423 (47%), Gaps = 22/423 (5%)
Query: 104 GHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVS 163
G S + F D+ + + TF +L + +QVH K+G +VS
Sbjct: 294 GQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVS 353
Query: 164 NGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQN 223
N L+ +Y + R FAR VFD + +R ++ W S+I G AQ+G E + LF ++R
Sbjct: 354 NSLINMYCK-LRKFGFARTVFDNMSERDLIS-WNSVIAGIAQNGLEVEAVCLFMQLLRCG 411
Query: 224 LRPQNDTMVSVLSACSSL-EISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKW 282
L+P TM SVL A SSL E + + V+ + I++ + + V+T L+ + +
Sbjct: 412 LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDS------FVSTALIDAYSRN 465
Query: 283 GNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTM 342
++++ F+R +V WNAM++ Y Q + L LF +M K+G R + T+
Sbjct: 466 RCMKEAEILFER----HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQG-ERSDDFTL 520
Query: 343 VSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFE 402
+V C + ++ GK VH Y I G+ ++ +++ ++DMY KCG + A+ F+
Sbjct: 521 ATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLW----VSSGILDMYVKCGDMSAAQFAFD 576
Query: 403 HAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLER 462
D V + MI G NGE E A +F +M G+ P+ T A S LE+
Sbjct: 577 SIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQ 636
Query: 463 GRQIFRDMSFSTSLTLEHY--ACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGC 520
GRQI + + + T + + +D+ A+ G I++A + + N W A+L G
Sbjct: 637 GRQIHAN-ALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGL 694
Query: 521 LLH 523
H
Sbjct: 695 AQH 697
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 140/567 (24%), Positives = 239/567 (42%), Gaps = 88/567 (15%)
Query: 51 HARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQG-- 104
HARI + + L LI Y A RVF + + ++ +N+I+ A+
Sbjct: 62 HARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSEC 121
Query: 105 ---HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPS 161
++ F LF L+ V+ + T S +LK+C S +E H + K+G D
Sbjct: 122 VVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEF 181
Query: 162 VSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVR 221
V+ LV +Y + F V + +F+E+P R +V W ++ Y + G EE + L
Sbjct: 182 VAGALVNIYLK-FGKVKEGKVLFEEMPYR-DVVLWNLMLKAYLEMGFKEEAIDLSSAFHS 239
Query: 222 QNLRPQNDTM----------------------------------------------VSVL 235
L P T+ S L
Sbjct: 240 SGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSAL 299
Query: 236 SAC------SSLEISKIERWVYFLSELIDDSTSNGESCH--------DSVNTVLVYLFGK 281
C S +E ++ + + + DS + G+ H D + TV L
Sbjct: 300 LKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINM 359
Query: 282 WGNVEK---SRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPN 338
+ + K +R FD +S +R ++ WN++I+ Q+G VE + LF +++ G +P+
Sbjct: 360 YCKLRKFGFARTVFDNMS---ERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCG-LKPD 415
Query: 339 HVTMVSVLSACAQIGD-LSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRA 397
TM SVL A + + + LSL K VH + I I N S+ ++T+LID YS+ + A
Sbjct: 416 QYTMTSVLKAASSLPEGLSLSKQVHVHAIKI----NNVSDSFVSTALIDAYSRNRCMKEA 471
Query: 398 KEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHS 457
+ +FE + D+V +NAM+ G + +G L+LF M + G + + T C
Sbjct: 472 EILFERH-NFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFL 530
Query: 458 GFLERGRQIFR-DMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGAL 516
+ +G+Q+ + L L + +D+ + G + A S+P P++ W +
Sbjct: 531 FAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTM 589
Query: 517 LGGCLLHSRVELAQEV--SKRLVEVDP 541
+ GC+ + E A V RL+ V P
Sbjct: 590 ISGCIENGEEERAFHVFSQMRLMGVLP 616
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 164/499 (32%), Positives = 261/499 (52%), Gaps = 32/499 (6%)
Query: 130 FLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYA--RGFRNVV-FARKVFDE 186
+LLK C + + QVHA K+ S S V G+ N + +A +F
Sbjct: 35 YLLKRCHNIDEFK---QVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRG 91
Query: 187 IPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSL----E 242
I D + ++I GY EE L ++ M+++ P N T +L AC+ L E
Sbjct: 92 IDDPCTFD-FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIRE 150
Query: 243 ISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRG 302
+I V+ L D N L+ ++G+ G +E S F+++ + +
Sbjct: 151 GKQIHGQVFKLGLEADVFVQNS----------LINMYGRCGEMELSSAVFEKLES---KT 197
Query: 303 VVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVH 362
W++M+SA G E L LFR M E + MVS L ACA G L+LG +H
Sbjct: 198 AASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIH 257
Query: 363 EYLISIGHKGNIGS-NQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAV 421
+L+ NI N I+ TSL+DMY KCG LD+A +F+ ++ + ++AMI GLA+
Sbjct: 258 GFLLR-----NISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLAL 312
Query: 422 NGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSL--TLE 479
+GEGE ALR+F KM + GL+P+ ++ L+ACSHSG ++ GR++F +M + T E
Sbjct: 313 HGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAE 372
Query: 480 HYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEV 539
HY C +DLL R G +EEA+E + S+P + N+ +W L C + +EL Q ++ L+++
Sbjct: 373 HYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKL 432
Query: 540 DPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLS 599
+ G Y++++N + + W+DV+ R E+ KG+K+ PG S + + G H F+ S
Sbjct: 433 SSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRS 492
Query: 600 HPQIEGIYLTLTGLAKHMK 618
HP+ + IY L + +K
Sbjct: 493 HPKCKEIYKMLHQMEWQLK 511
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 163/342 (47%), Gaps = 19/342 (5%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
A +F + +P F FN +IR +N++ R P++FT+ LLK C R
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWT 197
K R +Q+H + K+G D V N L+ +Y R + + VF+++ ++ + W+
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGR-CGEMELSSAVFEKLESKTAAS-WS 202
Query: 198 SLITGYAQSGHGEEVLQLFHMMVRQ-NLRPQNDTMVSVLSACSSLEISKIERWVY-FLSE 255
S+++ A G E L LF M + NL+ + MVS L AC++ + ++ FL
Sbjct: 203 SMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLR 262
Query: 256 LIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQ 315
I + + V T LV ++ K G ++K+ F ++ KR + ++AMIS
Sbjct: 263 NISE-------LNIIVQTSLVDMYVKCGCLDKALHIFQKME---KRNNLTYSAMISGLAL 312
Query: 316 DGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIG 375
G L +F M+KEG P+HV VSVL+AC+ G + G+ V ++ +G +
Sbjct: 313 HGEGESALRMFSKMIKEG-LEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLK---EGKVE 368
Query: 376 SNQILATSLIDMYSKCGRLDRAKEVFEH-AVSKDVVLFNAMI 416
L+D+ + G L+ A E + + K+ V++ +
Sbjct: 369 PTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFL 410
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 161/506 (31%), Positives = 267/506 (52%), Gaps = 29/506 (5%)
Query: 121 LAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFA 180
+A N + +++ R K +QVHAH+ GY S+ L+ + A R + +
Sbjct: 5 VAANSAAYEAIVRAGPRVKQL---QQVHAHLIVTGYGRSRSLLTKLITL-ACSARAIAYT 60
Query: 181 RKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSS 240
+F +P + + S+I ++ + + M+ N+ P N T SV+ +C+
Sbjct: 61 HLLFLSVPLPDDFL-FNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCAD 119
Query: 241 LEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGK 300
L +I + V+ + +G V LV + K G++E +R+ FDR+ +
Sbjct: 120 LSALRIGKGVHC------HAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMP---E 170
Query: 301 RGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKW 360
+ +V WN+++S + Q+G E + +F M +E P+ T VS+LSACAQ G +SLG W
Sbjct: 171 KSIVAWNSLVSGFEQNGLADEAIQVFYQM-RESGFEPDSATFVSLLSACAQTGAVSLGSW 229
Query: 361 VHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLA 420
VH+Y+IS G N+ L T+LI++YS+CG + +A+EVF+ +V + AMI
Sbjct: 230 VHQYIISEGLDLNVK----LGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYG 285
Query: 421 VNGEGEDALRLFYKMPE-FGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLT-- 477
+G G+ A+ LF KM + G PN TF+ LSAC+H+G +E GR +++ M+ S L
Sbjct: 286 THGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPG 345
Query: 478 LEHYACYIDLLARVGCIEEAIEVV-----TSMPFKPNNFVWGALLGGCLLHSRVELAQEV 532
+EH+ C +D+L R G ++EA + + T P +W A+LG C +H +L E+
Sbjct: 346 VEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPA--LWTAMLGACKMHRNYDLGVEI 403
Query: 533 SKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHE 592
+KRL+ ++P + G +VML+N A + ++VS +R M ++KQ G S I V+ +
Sbjct: 404 AKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYM 463
Query: 593 FLVGYLSHPQIEGIYLTLTGLAKHMK 618
F +G SH + IY L L K
Sbjct: 464 FSMGDESHQETGEIYRYLETLISRCK 489
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 183/367 (49%), Gaps = 33/367 (8%)
Query: 43 PR-SHLLQIHARIFQLGAHQDNLLATRLIGHYPPRIALRVFHYLHN----PNIFPFNAII 97
PR L Q+HA + G + L T+LI A+ H L P+ F FN++I
Sbjct: 20 PRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVI 79
Query: 98 RVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYL 157
+ ++ H + + + ++P+++TF+ ++K C R + VH H G+
Sbjct: 80 KSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFG 139
Query: 158 NDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFH 217
D V LV Y++ ++ AR+VFD +P++S + W SL++G+ Q+G +E +Q+F+
Sbjct: 140 LDTYVQAALVTFYSK-CGDMEGARQVFDRMPEKS-IVAWNSLVSGFEQNGLADEAIQVFY 197
Query: 218 MMVRQNLRPQNDTMVSVLSACSSLEISKIERWV--YFLSELIDDSTSNGESCHDSVNTVL 275
M P + T VS+LSAC+ + WV Y +SE +D + G T L
Sbjct: 198 QMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLG--------TAL 249
Query: 276 VYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTT 335
+ L+ + G+V K+RE FD++ + V W AMISAY G + + LF M +
Sbjct: 250 INLYSRCGDVGKAREVFDKMK---ETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGP 306
Query: 336 RPNHVTMVSVLSACAQIGDLSLGKWVHE-----YLISIGHKGNIGSNQILATSLIDMYSK 390
PN+VT V+VLSACA G + G+ V++ Y + G + ++ ++DM +
Sbjct: 307 IPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHV--------CMVDMLGR 358
Query: 391 CGRLDRA 397
G LD A
Sbjct: 359 AGFLDEA 365
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/442 (32%), Positives = 250/442 (56%), Gaps = 19/442 (4%)
Query: 159 DPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVT--CWTSLITGYAQSGHGEEVLQLF 216
+P + + L+ +++ R + ARK+FD++ D S +T W ++ GY+++G + L ++
Sbjct: 166 NPKLLSKLITLFSV-CRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVY 224
Query: 217 HMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLV 276
M+ + P N ++ L AC L+ ++ R ++ ++++ E V VL+
Sbjct: 225 VDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIH--AQIV----KRKEKVDQVVYNVLL 278
Query: 277 YLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTR 336
L+ + G + +R+ FD +S +R VV WN++IS + E +LFR M +E
Sbjct: 279 KLYMESGLFDDARKVFDGMS---ERNVVTWNSLISVLSKKVRVHEMFNLFRKM-QEEMIG 334
Query: 337 PNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDR 396
+ T+ ++L AC+++ L GK +H ++ K ++ L SL+DMY KCG ++
Sbjct: 335 FSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVP----LLNSLMDMYGKCGEVEY 390
Query: 397 AKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSH 456
++ VF+ ++KD+ +N M+ A+NG E+ + LF M E G+ P+ TF+ LS CS
Sbjct: 391 SRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSD 450
Query: 457 SGFLERGRQIFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWG 514
+G E G +F M F S LEHYAC +D+L R G I+EA++V+ +MPFKP+ +WG
Sbjct: 451 TGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWG 510
Query: 515 ALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKG 574
+LL C LH V + + +K L ++P + G YVM++N A + W++V +R M+++G
Sbjct: 511 SLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRG 570
Query: 575 IKKQPGSSWISVDGVVHEFLVG 596
+KK+ G SW+ V + F+ G
Sbjct: 571 VKKEAGCSWVQVKDKIQIFVAG 592
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 172/388 (44%), Gaps = 34/388 (8%)
Query: 30 TPTTFTNLLQGHIPRS---HLLQIHARIFQLGAHQDN-LLATRLIGHYPP----RIALRV 81
TP +T+LL I H ++I + I + + N L ++LI + +A ++
Sbjct: 130 TPEAYTDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKI 189
Query: 82 FHYLHNPNIFP---FNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRS 138
F + + ++ + A+ + G ++ D+ + P +F+ S LK C
Sbjct: 190 FDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDL 249
Query: 139 KDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARG--FRNVVFARKVFDEIPDRSEVTCW 196
KD R +HA I K D V N L+ +Y F + ARKVFD + +R+ VT W
Sbjct: 250 KDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDD---ARKVFDGMSERNVVT-W 305
Query: 197 TSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSEL 256
SLI+ ++ E+ LF M + + T+ ++L ACS + + E+
Sbjct: 306 NSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAA------LLTGKEI 359
Query: 257 IDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQD 316
+ E + L+ ++GK G VE SR FD + + + WN M++ Y +
Sbjct: 360 HAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLT---KDLASWNIMLNCYAIN 416
Query: 317 GCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGS 376
G E ++LF M++ G P+ +T V++LS C+ G G + E + K
Sbjct: 417 GNIEEVINLFEWMIESGVA-PDGITFVALLSGCSDTGLTEYGLSLFERM-----KTEFRV 470
Query: 377 NQILA--TSLIDMYSKCGRLDRAKEVFE 402
+ L L+D+ + G++ A +V E
Sbjct: 471 SPALEHYACLVDILGRAGKIKEAVKVIE 498
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 191/687 (27%), Positives = 315/687 (45%), Gaps = 115/687 (16%)
Query: 35 TNLLQGHIPRSH----LLQIHARIFQLGAHQDNLLATRLIGHYPPRI----ALRVFHYLH 86
TNLLQ + +S+ +H R+ + G L L+ Y A ++F +
Sbjct: 17 TNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMP 76
Query: 87 NPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRV-------------------------- 120
F +N ++ +++G + F+ L R
Sbjct: 77 LRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGD 136
Query: 121 -----LAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARG-- 173
+ P FT + +L ++ ++VH+ I K+G + SVSN L+ +YA+
Sbjct: 137 MVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGD 196
Query: 174 --FRNVVFARKV--------------------------FDEIPDRSEVTCWTSLITGYAQ 205
VF R V F+++ +R VT W S+I+G+ Q
Sbjct: 197 PMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVT-WNSMISGFNQ 255
Query: 206 SGHGEEVLQLFHMMVRQNL-RPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNG 264
G+ L +F M+R +L P T+ SVLSAC++LE I + ++ S ++ + G
Sbjct: 256 RGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIH--SHIV----TTG 309
Query: 265 ESCHDSVNTVLVYLFGKWGNVEKSRERFDR------------------------------ 294
V L+ ++ + G VE +R ++
Sbjct: 310 FDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNI 369
Query: 295 ISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGD 354
+ R VV W AMI Y Q G E ++LFR MV G RPN T+ ++LS + +
Sbjct: 370 FVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVG-GGQRPNSYTLAAMLSVASSLAS 428
Query: 355 LSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHA-VSKDVVLFN 413
LS GK +H + G ++ ++ +LI MY+K G + A F+ +D V +
Sbjct: 429 LSHGKQIHGSAVKSGEIYSVS----VSNALITMYAKAGNITSASRAFDLIRCERDTVSWT 484
Query: 414 AMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFS 473
+MI+ LA +G E+AL LF M GL+P+ T++G SAC+H+G + +GRQ F M
Sbjct: 485 SMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDV 544
Query: 474 TSL--TLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQE 531
+ TL HYAC +DL R G ++EA E + MP +P+ WG+LL C +H ++L +
Sbjct: 545 DKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKV 604
Query: 532 VSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVH 591
++RL+ ++P +SG Y LAN ++ +W + + +R M++ +KK+ G SWI V VH
Sbjct: 605 AAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVH 664
Query: 592 EFLVGYLSHPQIEGIYLTLTGLAKHMK 618
F V +HP+ IY+T+ + +K
Sbjct: 665 VFGVEDGTHPEKNEIYMTMKKIWDEIK 691
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 122/509 (23%), Positives = 216/509 (42%), Gaps = 107/509 (21%)
Query: 122 APNDFTFSFLLKVCF--------RSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYAR- 172
AP + S LL++C +S A+ VH + K G + + N L+ VY++
Sbjct: 3 APVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKT 62
Query: 173 GFRNVVFARKVFDEIPDRS-----------------EVTC-------------WTSLITG 202
G+ + ARK+FDE+P R+ + TC WT++I G
Sbjct: 63 GY--ALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVG 120
Query: 203 YAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVY-FLSELIDDST 261
Y G + +++ MV++ + P T+ +VL++ ++ + + V+ F+ +L
Sbjct: 121 YKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKL----- 175
Query: 262 SNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRI-------------------------- 295
G + SV+ L+ ++ K G+ ++ FDR+
Sbjct: 176 --GLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMA 233
Query: 296 --SAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIG 353
+R +V WN+MIS + Q G + L +F M+++ P+ T+ SVLSACA +
Sbjct: 234 QFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLE 293
Query: 354 DLSLGKWVHEYLISIGHK-GNIGSNQILA----------------------------TSL 384
L +GK +H ++++ G I N +++ T+L
Sbjct: 294 KLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTAL 353
Query: 385 IDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNA 444
+D Y K G +++AK +F +DVV + AMI+G +G +A+ LF M G +PN+
Sbjct: 354 LDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNS 413
Query: 445 GTFLGALSACSHSGFLERGRQIFRDMSFSTSL-TLEHYACYIDLLARVGCIEEAIEVVTS 503
T LS S L G+QI S + ++ I + A+ G I A
Sbjct: 414 YTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDL 473
Query: 504 MPFKPNNFVWGALLGGCLLHSRVELAQEV 532
+ + + W +++ H E A E+
Sbjct: 474 IRCERDTVSWTSMIIALAQHGHAEEALEL 502
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 252 bits (644), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 168/583 (28%), Positives = 294/583 (50%), Gaps = 41/583 (7%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQG 104
++H + + G D + LI Y + A +F + +I +NA+I E G
Sbjct: 217 EVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENG 276
Query: 105 HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSN 164
LF ++ + P+ T + ++ C D R +HA++ G+ D SV N
Sbjct: 277 MCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCN 336
Query: 165 GLVAVY--ARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQ 222
L +Y A +R A K+F + +R ++ WT++I+GY + ++ + + MM +
Sbjct: 337 SLTQMYLNAGSWRE---AEKLFSRM-ERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQD 392
Query: 223 NLRPQNDTMVSVLSACSSL-------EISKIERWVYFLSELIDDSTSNGESCHDSVNTVL 275
+++P T+ +VLSAC++L E+ K+ +S +I V L
Sbjct: 393 SVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVI-------------VANNL 439
Query: 276 VYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTT 335
+ ++ K ++K+ + F I ++ V+ W ++I+ + E L R M + T
Sbjct: 440 INMYSKCKCIDKALDIFHNIP---RKNVISWTSIIAGLRLNNRCFEALIFLRQM--KMTL 494
Query: 336 RPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLD 395
+PN +T+ + L+ACA+IG L GK +H +++ G +G + L +L+DMY +CGR++
Sbjct: 495 QPNAITLTAALAACARIGALMCGKEIHAHVLRTG----VGLDDFLPNALLDMYVRCGRMN 550
Query: 396 RAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACS 455
A F ++ KDV +N ++ G + G+G + LF +M + ++P+ TF+ L CS
Sbjct: 551 TAWSQF-NSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCS 609
Query: 456 HSGFLERGRQIFRDM-SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWG 514
S + +G F M + + L+HYAC +DLL R G ++EA + + MP P+ VWG
Sbjct: 610 KSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWG 669
Query: 515 ALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKG 574
ALL C +H +++L + ++ + E+D S G Y++L N A +W +V+ +R M+E G
Sbjct: 670 ALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENG 729
Query: 575 IKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHM 617
+ G SW+ V G VH FL HPQ + I L G + M
Sbjct: 730 LTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKM 772
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 140/471 (29%), Positives = 237/471 (50%), Gaps = 37/471 (7%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVL-----APNDFTFSFLL 132
A VF + N+F +N ++ A+QG+ L+ HR+L P+ +TF +L
Sbjct: 148 AWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLY----HRMLWVGGVKPDVYTFPCVL 203
Query: 133 KVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSE 192
+ C D ++VH H+ + GY D V N L+ +Y + +V AR +FD +P R +
Sbjct: 204 RTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVK-CGDVKSARLLFDRMP-RRD 261
Query: 193 VTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYF 252
+ W ++I+GY ++G E L+LF M ++ P T+ SV+SAC L ++ R ++
Sbjct: 262 IISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321
Query: 253 LSELIDDSTSNGESCHDSVNTVLVYLF---GKWGNVEKSRERFDRISAAGKRGVVPWNAM 309
+ G + SV L ++ G W EK R +R + +V W M
Sbjct: 322 Y------VITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMER------KDIVSWTTM 369
Query: 310 ISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIG 369
IS Y + P + + +R+M + + +P+ +T+ +VLSACA +GDL G +H+ I
Sbjct: 370 ISGYEYNFLPDKAIDTYRMM-DQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAI--- 425
Query: 370 HKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDAL 429
K + S I+A +LI+MYSKC +D+A ++F + K+V+ + ++I GL +N +AL
Sbjct: 426 -KARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL 484
Query: 430 RLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEHY--ACYIDL 487
+F + + LQPNA T AL+AC+ G L G++I + T + L+ + +D+
Sbjct: 485 -IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHV-LRTGVGLDDFLPNALLDM 542
Query: 488 LARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVE 538
R G + A S K + W LL G + + E+ R+V+
Sbjct: 543 YVRCGRMNTAWSQFNSQ--KKDVTSWNILLTGYSERGQGSMVVELFDRMVK 591
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 251 bits (642), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 165/501 (32%), Positives = 266/501 (53%), Gaps = 38/501 (7%)
Query: 159 DPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHM 218
+P VS L +V +A K ++ D W +I G++ S + E+ + ++
Sbjct: 40 EPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYG-WNFVIRGFSNSRNPEKSISVYIQ 98
Query: 219 MVRQNLRPQNDTMVSVLSACSSLEISKIE------------RWVYFLSELI--------D 258
M+R L P + T ++ + S L K+ W F+ + D
Sbjct: 99 MLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRD 158
Query: 259 DSTSN---GESCHDSVNT--VLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAY 313
+++ E H ++ T ++ + K G+V +R FD +S +R VV W++MI Y
Sbjct: 159 QASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMS---ERDVVTWSSMIDGY 215
Query: 314 VQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGN 373
V+ G + L +F M++ G+++ N VTMVSV+ ACA +G L+ GK VH Y++ + +
Sbjct: 216 VKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDV----H 271
Query: 374 IGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSK--DVVLFNAMIMGLAVNGEGEDALRL 431
+ IL TSLIDMY+KCG + A VF A K D +++NA+I GLA +G ++L+L
Sbjct: 272 LPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQL 331
Query: 432 FYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFS-TSLTLEHYACYIDLLAR 490
F+KM E + P+ TFL L+ACSH G ++ F+ + S EHYAC +D+L+R
Sbjct: 332 FHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSR 391
Query: 491 VGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVML 550
G +++A + ++ MP KP + GALL GC+ H +ELA+ V K+L+E+ P + G YV L
Sbjct: 392 AGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGL 451
Query: 551 ANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIY--L 608
AN A ++Q+ ++R M +KG+KK G S + +DG H F+ +H + IY L
Sbjct: 452 ANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVL 511
Query: 609 TLTGLAKHMKAPSHCQSVSCY 629
LTG ++ Q C+
Sbjct: 512 QLTGAWMNLDVDYDDQDNHCF 532
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 189/455 (41%), Gaps = 76/455 (16%)
Query: 45 SHLLQIHARIFQLGAHQDNLLATRLIGHYP------PRIALRVFHYLHNPNIFPFNAIIR 98
S L +IH + LG ++ ++ + A + L +P + +N +IR
Sbjct: 22 SELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIR 81
Query: 99 VLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLN 158
+ + S++ + L P+ T+ FL+K R + + +H + K G
Sbjct: 82 GFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEW 141
Query: 159 DPSVSNGLVAVYARGFRNVVFARKVFDEIPDRS--------------------------- 191
D + N L+ +Y FR+ ARK+FDE+P ++
Sbjct: 142 DLFICNTLIHMYG-SFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEM 200
Query: 192 ---EVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQND-TMVSVLSACSSLEISKIE 247
+V W+S+I GY + G + L++F M+R N+ TMVSV+ AC+ L
Sbjct: 201 SERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHL------ 254
Query: 248 RWVYFLSELIDDSTSNGESCHDSV-----------NTVLVYLFGKWGNVEKSRERFDRIS 296
+ + G++ H + T L+ ++ K G++ + F R S
Sbjct: 255 -----------GALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRAS 303
Query: 297 AAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLS 356
++ WNA+I G E L LF M +E P+ +T + +L+AC+ G
Sbjct: 304 VKETDALM-WNAIIGGLASHGFIRESLQLFHKM-RESKIDPDEITFLCLLAACSHGG--- 358
Query: 357 LGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKE-VFEHAVSKDVVLFNAM 415
L K + S+ G ++ A ++D+ S+ G + A + + E + + A+
Sbjct: 359 LVKEAWHFFKSLKESGAEPKSEHYAC-MVDVLSRAGLVKDAHDFISEMPIKPTGSMLGAL 417
Query: 416 IMGLAVNGEGEDALRLFYKMPEFGLQP-NAGTFLG 449
+ G +G E A + K+ E LQP N G ++G
Sbjct: 418 LNGCINHGNLELAETVGKKLIE--LQPHNDGRYVG 450
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 184/669 (27%), Positives = 314/669 (46%), Gaps = 90/669 (13%)
Query: 34 FTNLLQGHIPRSHLLQIHAR------IFQLGAHQDNLLA--TRLIGHYPPRIALRVFHYL 85
F +LL + Q+HA+ IF+ G+ NL++ RL R +
Sbjct: 59 FDHLLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLV 118
Query: 86 HNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAE 145
++ +N+I++ G + L+ ++ R L + + +L+ C
Sbjct: 119 LLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCR 178
Query: 146 QVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQ 205
H + ++G + V N L+ +Y + R + A +F E+P R+ ++ W +I G++Q
Sbjct: 179 AFHTQVIQIGLKENLHVVNELLTLYPKAGR-MGDAYNLFVEMPVRNRMS-WNVMIKGFSQ 236
Query: 206 SGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSA---CSSLE---------------ISKIE 247
E +++F M R+ +P T SVLS C E +S
Sbjct: 237 EYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEA 296
Query: 248 RWVYFLSELIDDSTSNGESCHDSV-----------NTVLVYLFGKWGNVEKSRERFDRIS 296
V+F ++ S E H V L++++GK G V+ + F +I
Sbjct: 297 LAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIR 356
Query: 297 AAGKRGVVPWNAMISAYVQ----------------------------------DGCPVEG 322
+G+ WN++I+++V GC V+G
Sbjct: 357 ---NKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQG 413
Query: 323 -----LSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSN 377
L FR M + N VT+ +LS CA++ L+LG+ +H ++I + ++ N
Sbjct: 414 RGDDSLEYFRQM-QFSKVLANSVTICCILSICAELPALNLGREIHGHVI----RTSMSEN 468
Query: 378 QILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPE 437
++ +L++MY+KCG L VFE KD++ +N++I G ++G E AL +F +M
Sbjct: 469 ILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMIS 528
Query: 438 FGLQPNAGTFLGALSACSHSGFLERGRQIFRDMS--FSTSLTLEHYACYIDLLARVGCIE 495
G P+ + LSACSH+G +E+GR+IF MS F EHYAC +DLL RVG ++
Sbjct: 529 SGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLK 588
Query: 496 EAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALA 555
EA E+V +MP +P V GALL C +H V++A+ ++ +L ++P +G Y++L+N +
Sbjct: 589 EASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYS 648
Query: 556 SDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAK 615
+ +W + + +R ++K +KK GSSWI V ++F G + + E IY L L
Sbjct: 649 AGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVS 708
Query: 616 HM--KAPSH 622
HM K P+H
Sbjct: 709 HMLKKGPTH 717
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 177/635 (27%), Positives = 291/635 (45%), Gaps = 82/635 (12%)
Query: 46 HLLQIHARIFQLGAHQDNLLATRLIGHYP----PRIALRVFHYLHNPNIFPFNAIIRVLA 101
++ IH I + + + L ++ Y A RVF + PN+F +N ++ +
Sbjct: 24 YVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYS 83
Query: 102 EQGHVSHVFSLFNDLKHR---------------------VLAPN----DF-------TFS 129
+ G +S + S F L R V A N DF T
Sbjct: 84 KAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLM 143
Query: 130 FLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPD 189
+LK+ + +Q+H + K+G+ + V + L+ +YA + A+KVF + D
Sbjct: 144 TMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYAN-VGCISDAKKVFYGLDD 202
Query: 190 RSEV-----------------------------TCWTSLITGYAQSGHGEEVLQLFHMMV 220
R+ V W ++I G AQ+G +E ++ F M
Sbjct: 203 RNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMK 262
Query: 221 RQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFG 280
Q L+ SVL AC L I + +I + + H V + L+ ++
Sbjct: 263 VQGLKMDQYPFGSVLPACGGL--GAINEGKQIHACIIRTNFQD----HIYVGSALIDMYC 316
Query: 281 KWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHV 340
K + ++ FDR+ ++ VV W AM+ Y Q G E + +F M + G P+H
Sbjct: 317 KCKCLHYAKTVFDRMK---QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID-PDHY 372
Query: 341 TMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEV 400
T+ +SACA + L G H I+ G + ++ SL+ +Y KCG +D + +
Sbjct: 373 TLGQAISACANVSSLEEGSQFHGKAITSGLIHYV----TVSNSLVTLYGKCGDIDDSTRL 428
Query: 401 FEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFL 460
F +D V + AM+ A G + ++LF KM + GL+P+ T G +SACS +G +
Sbjct: 429 FNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLV 488
Query: 461 ERGRQIFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLG 518
E+G++ F+ M+ + ++ HY+C IDL +R G +EEA+ + MPF P+ W LL
Sbjct: 489 EKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
Query: 519 GCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQ 578
C +E+ + ++ L+E+DP GY +L++ AS +W+ V+ LR MREK +KK+
Sbjct: 549 ACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKE 608
Query: 579 PGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGL 613
PG SWI G +H F S P ++ IY L L
Sbjct: 609 PGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEEL 643
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 159/546 (29%), Positives = 262/546 (47%), Gaps = 61/546 (11%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHYPPRIALR----VFHYLHNPNIFPFNAIIRVLAEQG 104
QIH +LG D L L+ Y + +F + N+ +N +I ++
Sbjct: 270 QIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEY 329
Query: 105 HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSN 164
++ PN+ T +L CFRS D
Sbjct: 330 RSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGD------------------------ 365
Query: 165 GLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNL 224
V R++F IP S V+ W ++++GY+ H EE + F M QNL
Sbjct: 366 ------------VETGRRIFSSIPQPS-VSAWNAMLSGYSNYEHYEEAISNFRQMQFQNL 412
Query: 225 RPQNDTMVSVLSACSSL---EISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGK 281
+P T+ +LS+C+ L E K V +E+ +S + + L+ ++ +
Sbjct: 413 KPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNS---------HIVSGLIAVYSE 463
Query: 282 WGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVT 341
+E S FD + + WN+MIS + + + L LFR M + PN +
Sbjct: 464 CEKMEISECIFD--DCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETS 521
Query: 342 MVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVF 401
+VLS+C+++ L G+ H ++ G+ S+ + T+L DMY KCG +D A++ F
Sbjct: 522 FATVLSSCSRLCSLLHGRQFHGLVVKSGYV----SDSFVETALTDMYCKCGEIDSARQFF 577
Query: 402 EHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLE 461
+ + K+ V++N MI G NG G++A+ L+ KM G +P+ TF+ L+ACSHSG +E
Sbjct: 578 DAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVE 637
Query: 462 RGRQIFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGG 519
G +I M L+HY C +D L R G +E+A ++ + P+K ++ +W LL
Sbjct: 638 TGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSS 697
Query: 520 CLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQP 579
C +H V LA+ V+++L+ +DP SS YV+L+N +S RQW+D +AL+ M + + K P
Sbjct: 698 CRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTP 757
Query: 580 GSSWIS 585
G SW +
Sbjct: 758 GQSWTT 763
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 188/443 (42%), Gaps = 88/443 (19%)
Query: 135 CFRSKDARC---AEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEI---- 187
C+R D RC + +H I +MG +D + N L+ +Y + +ARKVFDE+
Sbjct: 15 CYR--DERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIE-CGDGDYARKVFDEMSVRD 71
Query: 188 ---------------------------PDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMV 220
P+R +V W ++I+ + G E+ L ++ MV
Sbjct: 72 VYSWNAFLTFRCKVGDLGEACEVFDGMPER-DVVSWNNMISVLVRKGFEEKALVVYKRMV 130
Query: 221 RQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFG 280
P T+ SVLSACS K+ V+ + + G + V L+ ++
Sbjct: 131 CDGFLPSRFTLASVLSACS-----KVLDGVFGM-RCHGVAVKTGLDKNIFVGNALLSMYA 184
Query: 281 KWGNVEKSRER-FDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNH 339
K G + R F+ +S + V + A+I ++ +E + +FR+M ++G + +
Sbjct: 185 KCGFIVDYGVRVFESLSQPNE---VSYTAVIGGLARENKVLEAVQMFRLMCEKGV-QVDS 240
Query: 340 VTMVSVLS------ACAQIGDL---SLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSK 390
V + ++LS C + ++ LGK +H + +G G++ N SL+++Y+K
Sbjct: 241 VCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNN----SLLEIYAK 296
Query: 391 CGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGA 450
++ A+ +F +VV +N MI+G + ++ +M + G QPN T +
Sbjct: 297 NKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISV 356
Query: 451 LSACSHSGFLERGRQIFRDMS----------FSTSLTLEHYACYIDLLARVGCIEEAIEV 500
L AC SG +E GR+IF + S EHY EEAI
Sbjct: 357 LGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHY-------------EEAISN 403
Query: 501 VTSMPF---KPNNFVWGALLGGC 520
M F KP+ +L C
Sbjct: 404 FRQMQFQNLKPDKTTLSVILSSC 426
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 183/461 (39%), Gaps = 94/461 (20%)
Query: 50 IHARIFQLGAHQDNLLATRLI--------GHYPPRI------------------------ 77
IH I ++G D L RL+ G Y ++
Sbjct: 28 IHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGD 87
Query: 78 ---ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKV 134
A VF + ++ +N +I VL +G ++ + P+ FT + +L
Sbjct: 88 LGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSA 147
Query: 135 CFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVT 194
C + D + H K G + V N L+++YA+ V + +VF+ + +EV+
Sbjct: 148 CSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVS 207
Query: 195 CWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLS------ACSSL-EI--SK 245
+T++I G A+ E +Q+F +M + ++ + + ++LS C SL EI ++
Sbjct: 208 -YTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNE 266
Query: 246 IERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVP 305
+ + ++ L+ + G H +N L+ ++ K ++ + F + VV
Sbjct: 267 LGKQIHCLALRL----GFGGDLH--LNNSLLEIYAKNKDMNGAELIFAEMPEV---NVVS 317
Query: 306 WNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYL 365
WN MI + Q+ + + M G +PN VT +SVL AC + GD+ G
Sbjct: 318 WNIMIVGFGQEYRSDKSVEFLTRMRDSG-FQPNEVTCISVLGACFRSGDVETG------- 369
Query: 366 ISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEG 425
+ +F V +NAM+ G +
Sbjct: 370 --------------------------------RRIFSSIPQPSVSAWNAMLSGYSNYEHY 397
Query: 426 EDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQI 466
E+A+ F +M L+P+ T LS+C+ FLE G+QI
Sbjct: 398 EEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQI 438
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 166/509 (32%), Positives = 264/509 (51%), Gaps = 54/509 (10%)
Query: 145 EQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYA 204
+Q+HAH + G + L+ + N+V+ARK+FD S + LI Y
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLLLI-----PNLVYARKLFDH-HQNSCTFLYNKLIQAYY 58
Query: 205 QSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNG 264
E + L++++ LRP + T + +A +S ++ R ++ S+ +
Sbjct: 59 VHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLH--SQFFRSGFESD 116
Query: 265 ESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAY----------- 313
C T L+ + K G + +R FD +S KR V WNAMI+ Y
Sbjct: 117 SFC----CTTLITAYAKLGALCCARRVFDEMS---KRDVPVWNAMITGYQRRGDMKAAME 169
Query: 314 --------------------VQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIG 353
Q+G E L +F M K+ + +PNH+T+VSVL ACA +G
Sbjct: 170 LFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLG 229
Query: 354 DLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEH-AVSKDVVLF 412
+L +G+ + Y G NI + + I+MYSKCG +D AK +FE +++ +
Sbjct: 230 ELEIGRRLEGYARENGFFDNI----YVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSW 285
Query: 413 NAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMS- 471
N+MI LA +G+ ++AL LF +M G +P+A TF+G L AC H G + +G+++F+ M
Sbjct: 286 NSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEE 345
Query: 472 -FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQ 530
S LEHY C IDLL RVG ++EA +++ +MP KP+ VWG LLG C H VE+A+
Sbjct: 346 VHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAE 405
Query: 531 EVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGV- 589
S+ L +++PT+ G V+++N A++ +W+ V +R M+++ + K G S+ GV
Sbjct: 406 IASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVD 465
Query: 590 VHEFLVGYLSHPQIEGIYLTLTGLAKHMK 618
VH+F V SHP+ IY L + + MK
Sbjct: 466 VHKFTVEDKSHPRSYEIYQVLEEIFRRMK 494
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 92/192 (47%), Gaps = 8/192 (4%)
Query: 53 RIFQLGAHQDNLLATRLIGHYPPR----IALRVFHYLHNPNIFPFNAIIRVLAEQGHVSH 108
R+F + +D + +I Y R A+ +F + N+ + +I ++ G+ S
Sbjct: 138 RVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSE 197
Query: 109 VFSLFNDL-KHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLV 167
+F + K + + PN T +L C + ++ + ++ G+ ++ V N +
Sbjct: 198 ALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATI 257
Query: 168 AVYAR-GFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRP 226
+Y++ G +V A+++F+E+ ++ + W S+I A G +E L LF M+R+ +P
Sbjct: 258 EMYSKCGMIDV--AKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKP 315
Query: 227 QNDTMVSVLSAC 238
T V +L AC
Sbjct: 316 DAVTFVGLLLAC 327
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 144/432 (33%), Positives = 223/432 (51%), Gaps = 54/432 (12%)
Query: 175 RNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSV 234
+++V AR+ FD P+R ++ W ++I+GY + G+ E LF M P D M
Sbjct: 73 KDLVSARRYFDLSPER-DIVLWNTMISGYIEMGNMLEARSLFDQM------PCRDVM--- 122
Query: 235 LSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDR 294
S NTVL + G++E FD
Sbjct: 123 -----------------------------------SWNTVLEG-YANIGDMEACERVFDD 146
Query: 295 ISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGD 354
+ +R V WN +I Y Q+G E L F+ MV EG+ PN TM VLSACA++G
Sbjct: 147 MP---ERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGA 203
Query: 355 LSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNA 414
GKWVH+Y ++G+ + N + +LIDMY KCG ++ A EVF+ +D++ +N
Sbjct: 204 FDFGKWVHKYGETLGYN-KVDVN--VKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNT 260
Query: 415 MIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM--SF 472
MI GLA +G G +AL LF++M G+ P+ TF+G L AC H G +E G F M F
Sbjct: 261 MINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDF 320
Query: 473 STSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEV 532
S +EH C +DLL+R G + +A+E + MP K + +W LLG ++ +V++ +
Sbjct: 321 SIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVA 380
Query: 533 SKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHE 592
+ L++++P + +VML+N +++D + L++ MR+ G KK+ G SWI D + +
Sbjct: 381 LEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVK 440
Query: 593 FLVGYLSHPQIE 604
F HP+ E
Sbjct: 441 FYSSGEKHPRTE 452
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 114/272 (41%), Gaps = 41/272 (15%)
Query: 24 CSIVDHTPTTFTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHY---------- 73
C +V+ +T+++ G++ L+ R F L +D +L +I Y
Sbjct: 52 CEMVEKNVVLWTSMINGYLLNKDLVSAR-RYFDLSPERDIVLWNTMISGYIEMGNMLEAR 110
Query: 74 ------PPRIAL-------------------RVFHYLHNPNIFPFNAIIRVLAEQGHVSH 108
P R + RVF + N+F +N +I+ A+ G VS
Sbjct: 111 SLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSE 170
Query: 109 VFSLFNDL-KHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLN-DPSVSNGL 166
V F + + PND T + +L C + + VH + + +GY D +V N L
Sbjct: 171 VLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNAL 230
Query: 167 VAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRP 226
+ +Y + + A +VF I R ++ W ++I G A GHG E L LFH M + P
Sbjct: 231 IDMYGK-CGAIEIAMEVFKGIK-RRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISP 288
Query: 227 QNDTMVSVLSACSSLEISKIERWVYFLSELID 258
T V VL AC + + + + YF S D
Sbjct: 289 DKVTFVGVLCACKHMGLVE-DGLAYFNSMFTD 319
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 155/457 (33%), Positives = 243/457 (53%), Gaps = 56/457 (12%)
Query: 191 SEVTC-WTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERW 249
SE T WTS I ++G E + F M + P + T +++LS C
Sbjct: 33 SETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSG----- 87
Query: 250 VYFLSELIDDSTSNGESC-------HDSVNTVLVYLFGKWGNVEKSRERFD--------- 293
SE + D +G +C H V T ++ ++ K G +K+R FD
Sbjct: 88 ----SEALGDLL-HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVT 142
Query: 294 ------------RISAAGK-------RGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGT 334
++ A K R ++ W AMI+ +V+ G E L FR M G
Sbjct: 143 WNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGV 202
Query: 335 TRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRL 394
+P++V +++ L+AC +G LS G WVH Y++S K N+ ++ SLID+Y +CG +
Sbjct: 203 -KPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVR----VSNSLIDLYCRCGCV 257
Query: 395 DRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSAC 454
+ A++VF + + VV +N++I+G A NG ++L F KM E G +P+A TF GAL+AC
Sbjct: 258 EFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTAC 317
Query: 455 SHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFV 512
SH G +E G + F+ M + S +EHY C +DL +R G +E+A+++V SMP KPN V
Sbjct: 318 SHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVV 377
Query: 513 WGALLGGCLLH-SRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMR 571
G+LL C H + + LA+ + K L +++ S YV+L+N A+D +W S +R +M+
Sbjct: 378 IGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMK 437
Query: 572 EKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYL 608
G+KKQPG S I +D +H F+ G +H +E Y+
Sbjct: 438 GLGLKKQPGFSSIEIDDCMHVFMAGDNAH--VETTYI 472
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 174/404 (43%), Gaps = 99/404 (24%)
Query: 97 IRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVC--FRSKDARCAEQVHAHIQKM 154
I +L G ++ F+D+ + PN TF LL C F S + +H + K+
Sbjct: 43 INLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKL 102
Query: 155 GY-LNDPSVSNGLVAVYARGFR----NVVF--------------------------ARKV 183
G N V ++ +Y++ R +VF A K+
Sbjct: 103 GLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKM 162
Query: 184 FDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEI 243
FD++P+R ++ WT++I G+ + G+ EE L F M ++P +++ L+AC++L
Sbjct: 163 FDKMPER-DLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGA 221
Query: 244 SKIERWV--YFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKR 301
WV Y LS+ ++ V+ L+ L+ + G VE +R+ F + KR
Sbjct: 222 LSFGLWVHRYVLSQDFKNNV--------RVSNSLIDLYCRCGCVEFARQVFYNME---KR 270
Query: 302 GVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLG-KW 360
VV WN++I + +G E L FR M ++G +P+ VT L+AC+ +G + G ++
Sbjct: 271 TVVSWNSVIVGFAANGNAHESLVYFRKMQEKG-FKPDAVTFTGALTACSHVGLVEEGLRY 329
Query: 361 VH----EYLIS--IGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNA 414
+Y IS I H G L+D+YS+ GRL
Sbjct: 330 FQIMKCDYRISPRIEHYG----------CLVDLYSRAGRL-------------------- 359
Query: 415 MIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSG 458
EDAL+L MP ++PN L+ACS+ G
Sbjct: 360 -----------EDALKLVQSMP---MKPNEVVIGSLLAACSNHG 389
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 89/226 (39%), Gaps = 38/226 (16%)
Query: 50 IHARIFQLGAHQDNLL-ATRLIGHYPPRIALR----VFHYLHNPNIFPFNAIIRVLAEQG 104
+H +LG +++++ T +IG Y R + VF Y+ + N +N +I G
Sbjct: 95 LHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSG 154
Query: 105 HVSHVFSLFNDLKHRVL-------------------------------APNDFTFSFLLK 133
V + +F+ + R L P+ L
Sbjct: 155 QVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALN 214
Query: 134 VCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEV 193
C VH ++ + N+ VSN L+ +Y R V FAR+VF + R+ V
Sbjct: 215 ACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCR-CGCVEFARQVFYNMEKRT-V 272
Query: 194 TCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACS 239
W S+I G+A +G+ E L F M + +P T L+ACS
Sbjct: 273 VSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACS 318
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 165/542 (30%), Positives = 277/542 (51%), Gaps = 61/542 (11%)
Query: 130 FLLKVCFRSKDARCAEQVHAHIQKMGYLNDPS--VSNGLVAVYARGFRNVVFARKVFDEI 187
LL+ C R +++HA + G P +SN L YA +V A+K+FDEI
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASS-GEMVTAQKLFDEI 69
Query: 188 P-DRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLE---- 242
P + WT+L++ +++ G ++LF M R+ + + ++V + C+ LE
Sbjct: 70 PLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGF 129
Query: 243 --------------------------------ISKIERWVYFLSELIDDSTSNGESCHDS 270
+S+++R EL + S +
Sbjct: 130 AQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKR---IFEELEEKSVVSW------ 180
Query: 271 VNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMV 330
TV++ KW +E+ RE F + +R V W M++ Y+ G E L L MV
Sbjct: 181 --TVVLDTVVKWEGLERGREVFHEMP---ERNAVAWTVMVAGYLGAGFTREVLELLAEMV 235
Query: 331 KEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLIS----IGHKGNIGSNQILATSLID 386
N VT+ S+LSACAQ G+L +G+WVH Y + +G + + + ++ T+L+D
Sbjct: 236 FRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASY-DDVMVGTALVD 294
Query: 387 MYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGT 446
MY+KCG +D + VF ++VV +NA+ GLA++G+G + +F +M ++P+ T
Sbjct: 295 MYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR-EVKPDDLT 353
Query: 447 FLGALSACSHSGFLERGRQIFRDMSF-STSLTLEHYACYIDLLARVGCIEEAIEVVTSMP 505
F LSACSHSG ++ G + F + F ++HYAC +DLL R G IEEA ++ MP
Sbjct: 354 FTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMP 413
Query: 506 FKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSA 565
PN V G+LLG C +H +VE+A+ + + L+++ P ++ ++++N ++ + +
Sbjct: 414 VPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADG 473
Query: 566 LRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMKAPSHCQS 625
LR +R++GI+K PG S I V+ VH F G SHP+ + IYL L + + +++ +
Sbjct: 474 LRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPD 533
Query: 626 VS 627
VS
Sbjct: 534 VS 535
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 184/424 (43%), Gaps = 59/424 (13%)
Query: 43 PRSHLLQIHARIFQLGAHQDNLL-ATRLIGHYPPRIALRVFHYLHNPNIFPFNAIIRVLA 101
PRS+L +FQ A ++ A +L P L + + ++ +
Sbjct: 41 PRSYLSNA---LFQFYASSGEMVTAQKLFDEIP----------LSEKDNVDWTTLLSSFS 87
Query: 102 EQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPS 161
G + + LF +++ + + +D + L VC + +D A+Q H KMG L
Sbjct: 88 RYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVK 147
Query: 162 VSNGLVAVYAR------------------------------GFRNVVFARKVFDEIPDRS 191
V N L+ +Y + + + R+VF E+P+R+
Sbjct: 148 VCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERN 207
Query: 192 EVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQN-DTMVSVLSACSSLEISKIERWV 250
V WT ++ GY +G EVL+L MV + N T+ S+LSAC+ + RWV
Sbjct: 208 AVA-WTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWV 266
Query: 251 YFLSELIDDSTSNGESCHDS--VNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNA 308
+ + L + E+ +D V T LV ++ K GN++ S F + KR VV WNA
Sbjct: 267 HVYA-LKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMR---KRNVVTWNA 322
Query: 309 MISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISI 368
+ S G + +F M++E +P+ +T +VLSAC+ G + G L
Sbjct: 323 LFSGLAMHGKGRMVIDMFPQMIRE--VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFY 380
Query: 369 GHKGNIGSNQILATSLIDMYSKCGRLDRAKEVF-EHAVSKDVVLFNAMIMGLAVNGEGED 427
G + + ++D+ + G ++ A+ + E V + V+ +++ +V+G+ E
Sbjct: 381 GLEPKVDH----YACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEI 436
Query: 428 ALRL 431
A R+
Sbjct: 437 AERI 440
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 161/487 (33%), Positives = 254/487 (52%), Gaps = 24/487 (4%)
Query: 145 EQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYA 204
+++HA + + G+ S+ L+ ++ +AR+VFDE+ + + W +L GY
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVV-IGDMCYARQVFDEM-HKPRIFLWNTLFKGYV 85
Query: 205 QSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNG 264
++ E L L+ M +RP T V+ A IS++ + + L G
Sbjct: 86 RNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKA-----ISQLGDFSCGFA-LHAHVVKYG 139
Query: 265 ESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLS 324
C V T LV ++ K+G + + F+ + + +V WNA ++ VQ G L
Sbjct: 140 FGCLGIVATELVMMYMKFGELSSAEFLFESMQV---KDLVAWNAFLAVCVQTGNSAIALE 196
Query: 325 LFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSL 384
F M + + + T+VS+LSAC Q+G L +G+ +++ K I N I+ +
Sbjct: 197 YFNKMCADAV-QFDSFTVVSMLSACGQLGSLEIGEEIYDR----ARKEEIDCNIIVENAR 251
Query: 385 IDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNA 444
+DM+ KCG + A+ +FE ++VV ++ MI+G A+NG+ +AL LF M GL+PN
Sbjct: 252 LDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNY 311
Query: 445 GTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLE----HYACYIDLLARVGCIEEAIEV 500
TFLG LSACSH+G + G++ F M S LE HYAC +DLL R G +EEA E
Sbjct: 312 VTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEF 371
Query: 501 VTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQW 560
+ MP +P+ +WGALLG C +H + L Q+V+ LVE P +V+L+N A+ +W
Sbjct: 372 IKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKW 431
Query: 561 NDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMK-- 618
+ V +R +MR+ G KK S + +G +H F G SHPQ + IY L + K ++
Sbjct: 432 DCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKM 491
Query: 619 --APSHC 623
P C
Sbjct: 492 GYVPDTC 498
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 192/409 (46%), Gaps = 28/409 (6%)
Query: 26 IVDHTPTT---FTNLLQGHIPR-SHLLQIHARIFQLGAHQDNLLATRLIGHY----PPRI 77
+ TP T + LL+ + L +IHA + + G + N L T+L+ +
Sbjct: 2 LAKQTPLTKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCY 61
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
A +VF +H P IF +N + + L+ ++ + P++FT+ F++K +
Sbjct: 62 ARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQ 121
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWT 197
D C +HAH+ K G+ V+ LV +Y + F + A +F+ + + ++ W
Sbjct: 122 LGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMK-FGELSSAEFLFESMQVK-DLVAWN 179
Query: 198 SLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSAC---SSLEISKIERWVYFLS 254
+ + Q+G+ L+ F+ M ++ + T+VS+LSAC SLEI +
Sbjct: 180 AFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGE--------- 230
Query: 255 ELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYV 314
E+ D + C+ V + + K GN E +R F+ + +R VV W+ MI Y
Sbjct: 231 EIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMK---QRNVVSWSTMIVGYA 287
Query: 315 QDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNI 374
+G E L+LF M EG RPN+VT + VLSAC+ G ++ GK ++ K N+
Sbjct: 288 MNGDSREALTLFTTMQNEG-LRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDK-NL 345
Query: 375 GSNQILATSLIDMYSKCGRLDRAKEVFEH-AVSKDVVLFNAMIMGLAVN 422
+ ++D+ + G L+ A E + V D ++ A++ AV+
Sbjct: 346 EPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVH 394
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 249 bits (636), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 164/556 (29%), Positives = 281/556 (50%), Gaps = 24/556 (4%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
A +VF + +I +N++I L + ++ + + P+++T S + K
Sbjct: 118 ARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSD 177
Query: 138 SKDARCAEQVHAHIQKMGY-LNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCW 196
+ A++ H +G +++ V + LV +Y + F A+ V D + ++ +V
Sbjct: 178 LSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVK-FGKTREAKLVLDRVEEK-DVVLI 235
Query: 197 TSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSEL 256
T+LI GY+Q G E ++ F M+ + ++P T SVL +C +L+ + ++ L
Sbjct: 236 TALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLM-- 293
Query: 257 IDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQD 316
+G + T L+ ++ + V+ S F I + V W ++IS VQ+
Sbjct: 294 ----VKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQ---VSWTSLISGLVQN 346
Query: 317 GCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGS 376
G L FR M+++ + +PN T+ S L C+ + G+ +H + G
Sbjct: 347 GREEMALIEFRKMMRD-SIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYG----FDR 401
Query: 377 NQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMP 436
++ + LID+Y KCG D A+ VF+ DV+ N MI A NG G +AL LF +M
Sbjct: 402 DKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMI 461
Query: 437 EFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTS---LTLEHYACYIDLLARVGC 493
GLQPN T L L AC++S +E G ++F SF LT +HYAC +DLL R G
Sbjct: 462 NLGLQPNDVTVLSVLLACNNSRLVEEGCELFD--SFRKDKIMLTNDHYACMVDLLGRAGR 519
Query: 494 IEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANA 553
+EEA E++T+ P+ +W LL C +H +VE+A+ ++++++E++P G ++++N
Sbjct: 520 LEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNL 578
Query: 554 LASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYL-SHPQIEGIYLTLTG 612
AS +WN V ++ +M++ +KK P SW+ ++ H F+ G L SHP E I L
Sbjct: 579 YASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEE 638
Query: 613 LAKHMKAPSHCQSVSC 628
L K K + + SC
Sbjct: 639 LIKKSKDLGYVEDKSC 654
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 181/373 (48%), Gaps = 19/373 (5%)
Query: 127 TFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDE 186
FS LL+ C + + + AH+ K G+ + S S + A G ++ +AR+VFD
Sbjct: 67 NFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEISGSKLVDASLKCG--DIDYARQVFDG 124
Query: 187 IPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKI 246
+ +R VT W SLI + +E ++++ +M+ N+ P T+ SV A S L + K
Sbjct: 125 MSERHIVT-WNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKE 183
Query: 247 ERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPW 306
+ + L+ ++ SN V + LV ++ K+G +++ DR+ ++ VV
Sbjct: 184 AQRSHGLAVILGLEVSNV-----FVGSALVDMYVKFGKTREAKLVLDRVE---EKDVVLI 235
Query: 307 NAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLI 366
A+I Y Q G E + F+ M+ E +PN T SVL +C + D+ GK +H ++
Sbjct: 236 TALIVGYSQKGEDTEAVKAFQSMLVE-KVQPNEYTYASVLISCGNLKDIGNGKLIHGLMV 294
Query: 367 SIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGE 426
G + + S TSL+ MY +C +D + VF+ + V + ++I GL NG E
Sbjct: 295 KSGFESALASQ----TSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREE 350
Query: 427 DALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEHYA--CY 484
AL F KM ++PN+ T AL CS+ E GRQI + + YA
Sbjct: 351 MALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQI-HGIVTKYGFDRDKYAGSGL 409
Query: 485 IDLLARVGCIEEA 497
IDL + GC + A
Sbjct: 410 IDLYGKCGCSDMA 422
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 198/424 (46%), Gaps = 34/424 (8%)
Query: 34 FTNL-LQGHIPRSHLLQIHARIFQLGAHQDNL-LATRLIGHY----PPRIALRVFHYLHN 87
F++L L+ RSH L + LG N+ + + L+ Y R A V +
Sbjct: 175 FSDLSLEKEAQRSHGLAV-----ILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEE 229
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
++ A+I +++G + F + + PN++T++ +L C KD + +
Sbjct: 230 KDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLI 289
Query: 148 HAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSG 207
H + K G+ + + L+ +Y R V + +VF I ++V+ WTSLI+G Q+G
Sbjct: 290 HGLMVKSGFESALASQTSLLTMYLR-CSLVDDSLRVFKCIEYPNQVS-WTSLISGLVQNG 347
Query: 208 HGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESC 267
E L F M+R +++P + T+ S L CS+L + + R ++ + T G
Sbjct: 348 REEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGI------VTKYGFDR 401
Query: 268 HDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFR 327
+ L+ L+GK G + +R FD +S V+ N MI +Y Q+G E L LF
Sbjct: 402 DKYAGSGLIDLYGKCGCSDMARLVFDTLSEV---DVISLNTMIYSYAQNGFGREALDLFE 458
Query: 328 IMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHE--YLISIGHKGNIGSNQILATSLI 385
M+ G +PN VT++SVL AC + V E L K I ++
Sbjct: 459 RMINLG-LQPNDVTVLSVLLACNN------SRLVEEGCELFDSFRKDKIMLTNDHYACMV 511
Query: 386 DMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQP-NA 444
D+ + GRL+ A+ + ++ D+VL+ ++ V+ + E A R+ K+ E ++P +
Sbjct: 512 DLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILE--IEPGDE 569
Query: 445 GTFL 448
GT +
Sbjct: 570 GTLI 573
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 167/553 (30%), Positives = 282/553 (50%), Gaps = 23/553 (4%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHYPP---RIALR-VFHYLHNPNIFPFNAIIRVLAEQG 104
Q+H + GA D +++ LI Y + A+R VF + + + + +II + G
Sbjct: 68 QLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDG 127
Query: 105 HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR-SKDARCAEQVHAHIQKMGYLNDPSV- 162
+ L ++ P + LL +C R ++ A HA + + + +
Sbjct: 128 LLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLL 187
Query: 163 SNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQ 222
S LV +Y + F + A VFD++ ++EV+ WT++I+G + + E + LF M R+
Sbjct: 188 STALVDMYLK-FDDHAAAFHVFDQMEVKNEVS-WTAMISGCVANQNYEMGVDLFRAMQRE 245
Query: 223 NLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKW 282
NLRP T++SVL AC L + E+ S +G + + + ++ +
Sbjct: 246 NLRPNRVTLLSVLPACVELNYGS-----SLVKEIHGFSFRHGCHADERLTAAFMTMYCRC 300
Query: 283 GNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTM 342
GNV SR F+ + R VV W++MIS Y + G E ++L M KEG N VT+
Sbjct: 301 GNVSLSRVLFE---TSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGI-EANSVTL 356
Query: 343 VSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFE 402
++++SAC LS VH ++ G +I +L +LIDMY+KCG L A+EVF
Sbjct: 357 LAIVSACTNSTLLSFASTVHSQILKCGFMSHI----LLGNALIDMYAKCGSLSAAREVFY 412
Query: 403 HAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLER 462
KD+V +++MI ++G G +AL +F M + G + + FL LSAC+H+G +E
Sbjct: 413 ELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEE 472
Query: 463 GRQIFRDM-SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCL 521
+ IF + +TLEHYACYI+LL R G I++A EV +MP KP+ +W +LL C
Sbjct: 473 AQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACE 532
Query: 522 LHSRVELAQE-VSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPG 580
H R+++A + ++ L++ +P + YV+L+ ++ +R M+ + + K G
Sbjct: 533 THGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYG 592
Query: 581 SSWISVDGVVHEF 593
S I + + ++
Sbjct: 593 FSKIEPELQIEDY 605
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 128/439 (29%), Positives = 216/439 (49%), Gaps = 34/439 (7%)
Query: 116 LKHRVLAPNDFT--FSFLLKVC-FRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYAR 172
LK L N FT ++K C F+ + Q+H K G D VSN L+++YA+
Sbjct: 35 LKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAK 94
Query: 173 GFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMV 232
F RKVFDE+ R V+ + S+I Q G E ++L M P+++ +
Sbjct: 95 -FSRKYAVRKVFDEMLHRDTVS-YCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVA 152
Query: 233 SVLSACSSL-EISKIERWVYFLSELIDDSTSNGESCHDSV--NTVLVYLFGKWGNVEKSR 289
S+L+ C+ + SK+ R + L L+D E +SV +T LV ++ K+ + +
Sbjct: 153 SLLALCTRMGSSSKVARMFHALV-LVD------ERMQESVLLSTALVDMYLKFDDHAAAF 205
Query: 290 ERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSAC 349
FD++ + V W AMIS V + G+ LFR M +E RPN VT++SVL AC
Sbjct: 206 HVFDQMEVKNE---VSWTAMISGCVANQNYEMGVDLFRAMQRE-NLRPNRVTLLSVLPAC 261
Query: 350 AQIG-DLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKD 408
++ SL K +H + G +++ L + + MY +CG + ++ +FE + +D
Sbjct: 262 VELNYGSSLVKEIHGFSFRHG----CHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRD 317
Query: 409 VVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFR 468
VV++++MI G A G+ + + L +M + G++ N+ T L +SAC++S L +
Sbjct: 318 VVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHS 377
Query: 469 DM---SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSR 525
+ F + + L + ID+ A+ G + A EV + K + W +++ LH
Sbjct: 378 QILKCGFMSHILLGN--ALIDMYAKCGSLSAAREVFYELTEK-DLVSWSSMINAYGLHGH 434
Query: 526 VELAQEVSKRLV----EVD 540
A E+ K ++ EVD
Sbjct: 435 GSEALEIFKGMIKGGHEVD 453
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 158/506 (31%), Positives = 269/506 (53%), Gaps = 43/506 (8%)
Query: 136 FRSKDARCA-----EQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDR 190
R D +C+ +Q+HA + K G ++D ++ ++A ++ +A VF I +
Sbjct: 28 LRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHK 87
Query: 191 SEVTCWTSLITGYAQSGHGEEVLQLFHMMV--RQNLRPQNDTMVSVLSACSSLEISKIER 248
+ W ++I G+++S E + +F M+ +++PQ T SV A L ++ R
Sbjct: 88 NPFV-WNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGR 146
Query: 249 WVYFL---SELIDDSTSNGESCHDSVN----------------------TVLVYLFGKWG 283
++ + L DDS H V ++ F K G
Sbjct: 147 QLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCG 206
Query: 284 NVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMV 343
+++++ FD + +R V WN+MIS +V++G + L +FR M +E +P+ TMV
Sbjct: 207 LIDQAQNLFDEMP---QRNGVSWNSMISGFVRNGRFKDALDMFREM-QEKDVKPDGFTMV 262
Query: 344 SVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEH 403
S+L+ACA +G G+W+HEY++ + N I+ T+LIDMY KCG ++ VFE
Sbjct: 263 SLLNACAYLGASEQGRWIHEYIV----RNRFELNSIVVTALIDMYCKCGCIEEGLNVFEC 318
Query: 404 AVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERG 463
A K + +N+MI+GLA NG E A+ LF ++ GL+P++ +F+G L+AC+HSG + R
Sbjct: 319 APKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRA 378
Query: 464 RQIFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCL 521
+ FR M + +++HY +++L G +EEA ++ +MP + + +W +LL C
Sbjct: 379 DEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACR 438
Query: 522 LHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGS 581
VE+A+ +K L ++DP + GYV+L+NA AS + + RL M+E+ ++K+ G
Sbjct: 439 KIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGC 498
Query: 582 SWISVDGVVHEFLVGYLSHPQIEGIY 607
S I VD VHEF+ +HP+ IY
Sbjct: 499 SSIEVDFEVHEFISCGGTHPKSAEIY 524
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 205/458 (44%), Gaps = 52/458 (11%)
Query: 46 HLLQIHARIFQLGAHQDNLLATRLIGH---YPPRI--ALRVFHYLHNPNIFPFNAIIRVL 100
L QIHA + + G D + A+R++ P + A VF +++ N F +N IIR
Sbjct: 40 ELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGF 99
Query: 101 AEQGHVSHVFSLFNDL--KHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLN 158
+ S+F D+ + P T+ + K R AR Q+H + K G +
Sbjct: 100 SRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLED 159
Query: 159 DPSVSNGLVAVYAR---------------GFRNVVF---------------ARKVFDEIP 188
D + N ++ +Y GF V + A+ +FDE+P
Sbjct: 160 DSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMP 219
Query: 189 DRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIER 248
R+ V+ W S+I+G+ ++G ++ L +F M ++++P TMVS+L+AC+ L S+ R
Sbjct: 220 QRNGVS-WNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGR 278
Query: 249 WVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNA 308
W++ E I N + V T L+ ++ K G +E+ F+ A K+ + WN+
Sbjct: 279 WIH---EYI---VRNRFELNSIVVTALIDMYCKCGCIEEGLNVFE---CAPKKQLSCWNS 329
Query: 309 MISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISI 368
MI +G + LF + + G P+ V+ + VL+ACA G++ E+ +
Sbjct: 330 MILGLANNGFEERAMDLFSELERSG-LEPDSVSFIGVLTACAHSGEVHRA---DEFFRLM 385
Query: 369 GHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEH-AVSKDVVLFNAMIMGLAVNGEGED 427
K I + T ++++ G L+ A+ + ++ V +D V++++++ G E
Sbjct: 386 KEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEM 445
Query: 428 ALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQ 465
A R + + G L + + S+ F E Q
Sbjct: 446 AKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQ 483
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 158/519 (30%), Positives = 267/519 (51%), Gaps = 44/519 (8%)
Query: 132 LKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRS 191
L++C R++ A+ +HAHI K+G + ++N LV VY + A +VFDE+P R
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGK-CGAASHALQVFDEMPHRD 68
Query: 192 EVTCWTSLITGYAQSG-HGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWV 250
+ W S++T Q+ G+ + + LRP + +++ AC++L R V
Sbjct: 69 HIA-WASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQV 127
Query: 251 ---YFLSELIDDST---------------SNGESCHDSVN-------TVLVYLFGKWGNV 285
+ +SE +D ++ ++ DS+ T +V + K G
Sbjct: 128 HCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRK 187
Query: 286 EKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSV 345
E++ E F + + + W A+IS +VQ G +E S+F M +E + + + S+
Sbjct: 188 EEALELFRILPV---KNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSI 244
Query: 346 LSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAV 405
+ ACA + G+ VH +I++G S ++ +LIDMY+KC + AK++F
Sbjct: 245 VGACANLAASIAGRQVHGLVIALG----FDSCVFISNALIDMYAKCSDVIAAKDIFSRMR 300
Query: 406 SKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQ 465
+DVV + ++I+G+A +G+ E AL L+ M G++PN TF+G + ACSH GF+E+GR+
Sbjct: 301 HRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRE 360
Query: 466 IFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLH 523
+F+ M+ + +L+HY C +DLL R G ++EA ++ +MPF P+ W ALL C
Sbjct: 361 LFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQ 420
Query: 524 SRVELAQEVSKRLVEV----DPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQP 579
R ++ ++ LV DP++ Y++L+N AS W VS R ++ E ++K P
Sbjct: 421 GRGQMGIRIADHLVSSFKLKDPST---YILLSNIYASASLWGKVSEARRKLGEMEVRKDP 477
Query: 580 GSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMK 618
G S + V F G SHP E I+ L L + M+
Sbjct: 478 GHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMR 516
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 190/422 (45%), Gaps = 57/422 (13%)
Query: 50 IHARIFQLGAHQDNLLATRLIGHY----PPRIALRVFHYLHNPNIFPFNAIIRVLAEQGH 105
+HA I +LG Q LA L+ Y AL+VF + + + + +++ L Q +
Sbjct: 25 LHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTAL-NQAN 83
Query: 106 VS--HVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVS 163
+S + + L P+DF FS L+K C QVH H Y ND V
Sbjct: 84 LSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVK 143
Query: 164 NGLVAVYAR-GFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQ 222
+ LV +YA+ G N A+ VFD I ++ ++ WT++++GYA+SG EE L+LF ++ +
Sbjct: 144 SSLVDMYAKCGLLNS--AKAVFDSIRVKNTIS-WTAMVSGYAKSGRKEEALELFRILPVK 200
Query: 223 NL---------------------------RPQND-----TMVSVLSACSSLEISKIERWV 250
NL R + D + S++ AC++L S R V
Sbjct: 201 NLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQV 260
Query: 251 YFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMI 310
+ L + +SC ++ L+ ++ K +V +++ F R+ R VV W ++I
Sbjct: 261 HGLVIAL-----GFDSC-VFISNALIDMYAKCSDVIAAKDIFSRMR---HRDVVSWTSLI 311
Query: 311 SAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGH 370
Q G + L+L+ MV G +PN VT V ++ AC+ +G + G+ E S+
Sbjct: 312 VGMAQHGQAEKALALYDDMVSHG-VKPNEVTFVGLIYACSHVGFVEKGR---ELFQSMTK 367
Query: 371 KGNIGSNQILATSLIDMYSKCGRLDRAKE-VFEHAVSKDVVLFNAMIMGLAVNGEGEDAL 429
I + T L+D+ + G LD A+ + D + A++ G G+ +
Sbjct: 368 DYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGI 427
Query: 430 RL 431
R+
Sbjct: 428 RI 429
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 142/337 (42%), Gaps = 56/337 (16%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDL-KHRVLAPNDFTFSFLLKVCF 136
AL +F L N++ + A+I + G FS+F ++ + RV + S ++ C
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 137 RSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCW 196
+ QVH + +G+ + +SN L+ +YA+ +V+ A+ +F + R +V W
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAK-CSDVIAAKDIFSRMRHR-DVVSW 307
Query: 197 TSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSEL 256
TSLI G AQ G E+ L L+ MV ++P T V ++ ACS +
Sbjct: 308 TSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHV--------------- 352
Query: 257 IDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVP----WNAMISA 312
G VEK RE F S G+ P + ++
Sbjct: 353 --------------------------GFVEKGRELFQ--SMTKDYGIRPSLQHYTCLLDL 384
Query: 313 YVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKG 372
+ G E +L M P+ T ++LSAC + G +G + ++L+S K
Sbjct: 385 LGRSGLLDEAENLIHTM----PFPPDEPTWAALLSACKRQGRGQMGIRIADHLVS-SFKL 439
Query: 373 NIGSNQILATSLIDMYSKCGRLDRA-KEVFEHAVSKD 408
S IL +++ S G++ A +++ E V KD
Sbjct: 440 KDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKD 476
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 168/594 (28%), Positives = 294/594 (49%), Gaps = 33/594 (5%)
Query: 23 SCSIVDHT--------PTTFTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYP 74
+CS+V+ P T +L G + + L +H G D + ++ Y
Sbjct: 131 ACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYC 190
Query: 75 P----RIALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSF 130
A +F + ++ +N +I A G++S + L ++ L P+ TF
Sbjct: 191 KCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGA 250
Query: 131 LLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDR 190
L V D +H I K G+ D + L+ +Y + + + +V + IP++
Sbjct: 251 SLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEA-SYRVLETIPNK 309
Query: 191 SEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWV 250
+V CWT +I+G + G E+ L +F M++ ++ + SV+++C+ L + V
Sbjct: 310 -DVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASV 368
Query: 251 --YFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNA 308
Y L +G + L+ ++ K G+++KS F+R++ +R +V WNA
Sbjct: 369 HGYVLR--------HGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN---ERDLVSWNA 417
Query: 309 MISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISI 368
+IS Y Q+ + L LF M + + + T+VS+L AC+ G L +GK +H +I
Sbjct: 418 IISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVI-- 475
Query: 369 GHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDA 428
+ I ++ T+L+DMYSKCG L+ A+ F+ KDVV + +I G +G+G+ A
Sbjct: 476 --RSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIA 533
Query: 429 LRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYID 486
L ++ + G++PN FL LS+CSH+G +++G +IF M F EH AC +D
Sbjct: 534 LEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVD 593
Query: 487 LLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGG 546
LL R IE+A + +P+ V G +L C + + E+ + + ++E+ P +G
Sbjct: 594 LLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGH 653
Query: 547 YVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSH 600
YV L ++ A+ ++W+DVS +MR G+KK PG S I ++G F + + SH
Sbjct: 654 YVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSH 707
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 210/428 (49%), Gaps = 21/428 (4%)
Query: 93 FNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQ 152
FN+ I L+ G V S F+ + L P+ FTF LLK C + +H +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 153 KMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEV 212
G+ +D +S+ LV +YA+ F + ARKVF+E+ +R +V WT++I Y+++G E
Sbjct: 74 VNGFSSDFYISSSLVNLYAK-FGLLAHARKVFEEMRER-DVVHWTAMIGCYSRAGIVGEA 131
Query: 213 LQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVN 272
L + M Q ++P T++ +LS LEI++++ L D + G C +V
Sbjct: 132 CSLVNEMRFQGIKPGPVTLLEMLSGV--LEITQLQC-------LHDFAVIYGFDCDIAVM 182
Query: 273 TVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKE 332
++ L+ K +V +++ FD++ +R +V WN MIS Y G E L L M +
Sbjct: 183 NSMLNLYCKCDHVGDAKDLFDQME---QRDMVSWNTMISGYASVGNMSEILKLLYRMRGD 239
Query: 333 GTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCG 392
G RP+ T + LS + DL +G+ +H ++ G ++ L T+LI MY KCG
Sbjct: 240 G-LRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMH----LKTALITMYLKCG 294
Query: 393 RLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALS 452
+ + + V E +KDVV + MI GL G E AL +F +M + G ++ ++
Sbjct: 295 KEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVA 354
Query: 453 ACSHSGFLERGRQIF-RDMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNF 511
+C+ G + G + + +L I + A+ G +++++ + M + +
Sbjct: 355 SCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLV 413
Query: 512 VWGALLGG 519
W A++ G
Sbjct: 414 SWNAIISG 421
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 159/543 (29%), Positives = 265/543 (48%), Gaps = 22/543 (4%)
Query: 80 RVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSK 139
RVF + N + AII L G + F+++ + +TF+ LK C +
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLR 223
Query: 140 DARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSL 199
+ + +H H+ G++ V+N L +Y + +F+ + +R +V WTSL
Sbjct: 224 QVKYGKAIHTHVIVRGFVTTLCVANSLATMYTE-CGEMQDGLCLFENMSER-DVVSWTSL 281
Query: 200 ITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDD 259
I Y + G + ++ F M + P T S+ SAC+SL R V+ +L +
Sbjct: 282 IVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLS-----RLVWG-EQLHCN 335
Query: 260 STSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCP 319
S G + SV+ ++ ++ GN+ + F + R ++ W+ +I Y Q G
Sbjct: 336 VLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRC---RDIISWSTIIGGYCQAGFG 392
Query: 320 VEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQI 379
EG F M + GT +P + S+LS + + G+ VH + G + N
Sbjct: 393 EEGFKYFSWMRQSGT-KPTDFALASLLSVSGNMAVIEGGRQVHALALCFG----LEQNST 447
Query: 380 LATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFG 439
+ +SLI+MYSKCG + A +F D+V AMI G A +G+ ++A+ LF K + G
Sbjct: 448 VRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVG 507
Query: 440 LQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEA 497
+P++ TF+ L+AC+HSG L+ G F M +++ EHY C +DLL R G + +A
Sbjct: 508 FRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDA 567
Query: 498 IEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASD 557
+++ M +K ++ VW LL C +E + ++R++E+DPT + V LAN +S
Sbjct: 568 EKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSST 627
Query: 558 RQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIY----LTLTGL 613
+ + +R M+ KG+ K+PG S I + V F+ G HPQ E IY L ++G
Sbjct: 628 GNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILELAVSGA 687
Query: 614 AKH 616
H
Sbjct: 688 EAH 690
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 221/488 (45%), Gaps = 42/488 (8%)
Query: 23 SCSIVDHTPTTFTNLLQGHIPRSHLLQIHARI---FQLGAHQDNLLATRLIGHYPPRIAL 79
+C + TT +LLQ + ++++I ++ F +H +L I R A
Sbjct: 7 NCGTIQRFCTTSISLLQKPVEE-NIVRISNQVMVKFDPNSHLRSL-----INAGNLRAAR 60
Query: 80 RVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLK--HRVLAPNDFTFSFLLKVCFR 137
+VF + + +I + +II+ + LF+ ++ ++P+ S +LK C +
Sbjct: 61 QVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQ 120
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWT 197
S + E +HA+ K L+ V + L+ +Y R + + +VF E+P R+ VT WT
Sbjct: 121 SSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKR-VGKIDKSCRVFSEMPFRNAVT-WT 178
Query: 198 SLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVY------ 251
++ITG +G +E L F M R T L AC+ L K + ++
Sbjct: 179 AIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVR 238
Query: 252 -FLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMI 310
F++ L V L ++ + G ++ F+ +S +R VV W ++I
Sbjct: 239 GFVTTLC-------------VANSLATMYTECGEMQDGLCLFENMS---ERDVVSWTSLI 282
Query: 311 SAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGH 370
AY + G V+ + F I ++ PN T S+ SACA + L G+ +H ++S+G
Sbjct: 283 VAYKRIGQEVKAVETF-IKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGL 341
Query: 371 KGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALR 430
++ ++ S++ MYS CG L A +F+ +D++ ++ +I G G GE+ +
Sbjct: 342 NDSLS----VSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFK 397
Query: 431 LFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFR-DMSFSTSLTLEHYACYIDLLA 489
F M + G +P LS + +E GRQ+ + F + I++ +
Sbjct: 398 YFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYS 457
Query: 490 RVGCIEEA 497
+ G I+EA
Sbjct: 458 KCGSIKEA 465
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 189/410 (46%), Gaps = 19/410 (4%)
Query: 63 NLLATRLIGHYPPRIALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLA 122
N LAT + L +F + ++ + ++I G F +++ +
Sbjct: 248 NSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVP 307
Query: 123 PNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARK 182
PN+ TF+ + C EQ+H ++ +G + SVSN ++ +Y+ N+V A
Sbjct: 308 PNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYST-CGNLVSASV 366
Query: 183 VFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLE 242
+F + R ++ W+++I GY Q+G GEE + F M + +P + + S+LS ++
Sbjct: 367 LFQGMRCR-DIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMA 425
Query: 243 ISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRG 302
+ + R V+ L+ G + +V + L+ ++ K G+++++ F +
Sbjct: 426 VIEGGRQVHALALCF------GLEQNSTVRSSLINMYSKCGSIKEASMIFGETD---RDD 476
Query: 303 VVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVH 362
+V AMI+ Y + G E + LF +K G RP+ VT +SVL+AC G L LG
Sbjct: 477 IVSLTAMINGYAEHGKSKEAIDLFEKSLKVG-FRPDSVTFISVLTACTHSGQLDLG---F 532
Query: 363 EYLISIGHKGNIGSNQILATSLIDMYSKCGRL-DRAKEVFEHAVSKDVVLFNAMIMGLAV 421
Y + N+ + ++D+ + GRL D K + E + KD V++ +++
Sbjct: 533 HYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKA 592
Query: 422 NGEGEDALRLFYKMPEFGLQPNAGTFLGALSAC-SHSGFLERGRQIFRDM 470
G+ E R ++ E L P T L L+ S +G LE + ++M
Sbjct: 593 KGDIERGRRAAERILE--LDPTCATALVTLANIYSSTGNLEEAANVRKNM 640
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 7/137 (5%)
Query: 392 GRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMP--EFGLQPNAGTFLG 449
G L A++VF+ D+V + ++I ++AL LF M + + P+
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 450 ALSACSHSGFLERGRQIFRDMSFSTSLTLEHY--ACYIDLLARVGCIEEAIEVVTSMPFK 507
L AC S + G + + TSL Y + +D+ RVG I+++ V + MPF+
Sbjct: 114 VLKACGQSSNIAYGESL-HAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFR 172
Query: 508 PNNFVWGALLGGCLLHS 524
N W A++ G L+H+
Sbjct: 173 -NAVTWTAIITG-LVHA 187
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 173/547 (31%), Positives = 272/547 (49%), Gaps = 28/547 (5%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGH---YPPRIALRVFHYLHNPNIFPFNAIIRVLAEQGH 105
+IH + + G +D+ ++L+ R A +F ++ N N+F FN +IR +
Sbjct: 46 RIHGYMVKTGLDKDDFAVSKLLAFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDE 105
Query: 106 VSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNG 165
FS+FN L+ + L + F+F LK C R E +H + G++ + N
Sbjct: 106 PERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNA 165
Query: 166 LVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLR 225
L+ Y + + ARKVFDE+P + +++L+ GY Q L LF +M + +
Sbjct: 166 LIHFYCVCGK-ISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVV 224
Query: 226 PQNDTMVSVLSACSSL-EISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGN 284
T++S LSA S L ++S E ++ G + T L+ ++GK G
Sbjct: 225 VNVSTLLSFLSAISDLGDLSGAESAHVLCIKI-------GLDLDLHLITALIGMYGKTGG 277
Query: 285 VEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVS 344
+ +R FD A ++ VV WN MI Y + G E + L R M E +PN T V
Sbjct: 278 ISSARRIFD---CAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYE-KMKPNSSTFVG 333
Query: 345 VLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHA 404
+LS+CA +G+ V + L + I + IL T+L+DMY+K G L++A E+F
Sbjct: 334 LLSSCAYSEAAFVGRTVADLL----EEERIALDAILGTALVDMYAKVGLLEKAVEIFNRM 389
Query: 405 VSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFG--LQPNAGTFLGALSACSHSGFLER 462
KDV + AMI G +G +A+ LF KM E ++PN TFL L+ACSH G +
Sbjct: 390 KDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVME 449
Query: 463 GRQIFRDMSFSTSLT--LEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGC 520
G + F+ M + S T +EHY C +DLL R G +EEA E++ ++P ++ W ALL C
Sbjct: 450 GIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAAC 509
Query: 521 LLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPG 580
++ +L + V RL E+ T ++LA A N +L E+ KG +K+ G
Sbjct: 510 RVYGNADLGESVMMRLAEMGETHPADAILLAGTHAV--AGNPEKSLDNEL-NKG-RKEAG 565
Query: 581 SSWISVD 587
S I ++
Sbjct: 566 YSAIEIE 572
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 176/577 (30%), Positives = 297/577 (51%), Gaps = 42/577 (7%)
Query: 25 SIVDHTPTTFTNLLQGH---IPRSHLLQIHARIFQLGAHQDNLLATRLIGHY-----PPR 76
S + TP + +LLQ H +Q HA + + G D + L+ Y R
Sbjct: 55 SEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMR 114
Query: 77 IALRVFHYLHNPNIFPFNAIIRVLAEQGHVS---HVFSL--FNDLKHRVLAPNDFTFSFL 131
RVF F +AI G+V+ HV +L F ++ L N+FT S
Sbjct: 115 ETRRVF-----DGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSA 169
Query: 132 LKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRS 191
+K C + R H + G+ + +S+ L +Y R V AR+VFDE+P+
Sbjct: 170 VKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVN-REPVDARRVFDEMPE-P 227
Query: 192 EVTCWTSLITGYAQSGHGEEVLQLFHMMVR-QNLRPQNDTMVSVLSACSSLEISKIERWV 250
+V CWT++++ ++++ EE L LF+ M R + L P T +VL+AC +L K + +
Sbjct: 228 DVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEI 287
Query: 251 YFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMI 310
+ +LI +NG + V + L+ ++GK G+V ++R+ F+ +S K+ V W+A++
Sbjct: 288 H--GKLI----TNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMS---KKNSVSWSALL 338
Query: 311 SAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGH 370
Y Q+G + + +FR M ++ + +VL ACA + + LGK +H + G
Sbjct: 339 GGYCQNGEHEKAIEIFREMEEK-----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGC 393
Query: 371 KGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALR 430
GN+ I+ ++LID+Y K G +D A V+ ++++ +NAM+ LA NG GE+A+
Sbjct: 394 FGNV----IVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVS 449
Query: 431 LFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDLL 488
F M + G++P+ +F+ L+AC H+G ++ GR F M S+ EHY+C IDLL
Sbjct: 450 FFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLL 509
Query: 489 ARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRV-ELAQEVSKRLVEVDPTSSGGY 547
R G EEA ++ + + +WG LLG C ++ +A+ ++KR++E++P Y
Sbjct: 510 GRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSY 569
Query: 548 VMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWI 584
V+L+N + + D +R M +G+ K G SWI
Sbjct: 570 VLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWI 606
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 245 bits (625), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 173/608 (28%), Positives = 281/608 (46%), Gaps = 75/608 (12%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
A +VF + + +N ++ + G +LF L+ P+D++F+ +L C
Sbjct: 23 ARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCAS 82
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEI--PDRSEVT- 194
+ + ++ + + + G+ V+N L+ +Y + + + A KVF ++ R+EVT
Sbjct: 83 LGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGK-CSDTLSANKVFRDMCCDSRNEVTW 141
Query: 195 -----------------------------CWTSLITGYAQSGHGEEVLQLFHMMVRQNLR 225
W +I+G+A G E L LF M+ +
Sbjct: 142 CSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFK 201
Query: 226 PQNDTMVSVLSACS---------------------SLEISKIERWVYFLSEL--IDDSTS 262
P T S+++ACS S + + F ++L DD+
Sbjct: 202 PDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMR 261
Query: 263 NGES----CHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGC 318
ES S N+++ K G EK+ E F A ++ +V W MI+ Y ++G
Sbjct: 262 ELESIEVLTQVSWNSIIDACM-KIGETEKALEVF---HLAPEKNIVTWTTMITGYGRNGD 317
Query: 319 PVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQ 378
+ L F M+K G +H +VL AC+ + L GK +H LI G +G
Sbjct: 318 GEQALRFFVEMMKSGVD-SDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGY----A 372
Query: 379 ILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEF 438
+ +L+++Y+KCG + A F +KD+V +N M+ V+G + AL+L+ M
Sbjct: 373 YVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIAS 432
Query: 439 GLQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEE 496
G++P+ TF+G L+ CSHSG +E G IF M + L ++H C ID+ R G + E
Sbjct: 433 GIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAE 492
Query: 497 AIEVVTS----MPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLAN 552
A ++ T+ + NN W LLG C H EL +EVSK L +P+ +V+L+N
Sbjct: 493 AKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSN 552
Query: 553 ALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTG 612
S +W + +R EM E+G+KK PG SWI V V F+VG SHP++E + TL
Sbjct: 553 LYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNC 612
Query: 613 LAKHMKAP 620
L M+ P
Sbjct: 613 LQHEMRNP 620
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 154/352 (43%), Gaps = 55/352 (15%)
Query: 167 VAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRP 226
+A A+ R + AR+VFD +P+ V W +++T Y++ G +E + LF + + +P
Sbjct: 11 IASLAKSGR-IASARQVFDGMPELDTVA-WNTMLTSYSRLGLHQEAIALFTQLRFSDAKP 68
Query: 227 QNDTMVSVLSACSSLEISKIERWVYFL-------------SELID------DSTSNG--- 264
+ + ++LS C+SL K R + L + LID D+ S
Sbjct: 69 DDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVF 128
Query: 265 -ESCHDSVNTVL-VYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEG 322
+ C DS N V L + N E+ D KR WN MIS + G
Sbjct: 129 RDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESC 188
Query: 323 LSLFRIMVKEGTTRPNHVTMVSVLSAC-AQIGDLSLGKWVHEYLISIGHKG--------- 372
LSLF+ M+ E +P+ T S+++AC A ++ G+ VH ++ G
Sbjct: 189 LSLFKEML-ESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVL 247
Query: 373 ----NIGS--------------NQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNA 414
+GS Q+ S+ID K G ++A EVF A K++V +
Sbjct: 248 SFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTT 307
Query: 415 MIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQI 466
MI G NG+GE ALR F +M + G+ + + L ACS L G+ I
Sbjct: 308 MITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMI 359
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 244 bits (624), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 167/588 (28%), Positives = 289/588 (49%), Gaps = 31/588 (5%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHYPPR----IALRVFHYLHNPNIFPFNAIIRVLAEQG 104
+IHA + +LG D + LI Y A +VF + +I +N++I G
Sbjct: 151 KIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALG 210
Query: 105 HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAH-IQKMGYLNDPSVS 163
LF ++ P+ F+ L C + +++H H ++ D V
Sbjct: 211 DGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVM 270
Query: 164 NGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQN 223
++ +Y++ + V +A ++F+ + R+ + W +I YA++G + F M QN
Sbjct: 271 TSILDMYSK-YGEVSYAERIFNGMIQRN-IVAWNVMIGCYARNGRVTDAFLCFQKMSEQN 328
Query: 224 -LRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKW 282
L+P T +++L A + LE I + + G H + T L+ ++G+
Sbjct: 329 GLQPDVITSINLLPASAILEGRTIHGY----------AMRRGFLPHMVLETALIDMYGEC 378
Query: 283 GNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTM 342
G ++ + FDR++ ++ V+ WN++I+AYVQ+G L LF+ + + + P+ T+
Sbjct: 379 GQLKSAEVIFDRMA---EKNVISWNSIIAAYVQNGKNYSALELFQELW-DSSLVPDSTTI 434
Query: 343 VSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFE 402
S+L A A+ LS G+ +H Y++ K SN I+ SL+ MY+ CG L+ A++ F
Sbjct: 435 ASILPAYAESLSLSEGREIHAYIV----KSRYWSNTIILNSLVHMYAMCGDLEDARKCFN 490
Query: 403 HAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLER 462
H + KDVV +N++IM AV+G G ++ LF +M + PN TF L+ACS SG ++
Sbjct: 491 HILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDE 550
Query: 463 GRQIFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGC 520
G + F M + +EHY C +DL+ R G A + MPF P +WG+LL
Sbjct: 551 GWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNAS 610
Query: 521 LLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPG 580
H + +A+ ++++ +++ ++G YV+L N A +W DV+ ++L M KGI +
Sbjct: 611 RNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSS 670
Query: 581 SSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMKAPS---HCQS 625
S + G H F G SH IY L +++ + HC S
Sbjct: 671 RSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVS 718
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 132/532 (24%), Positives = 252/532 (47%), Gaps = 39/532 (7%)
Query: 61 QDNLLATRLIGHYPPRI---ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLK 117
D L L G R+ AL++F ++ + F +N +I+ G ++ +
Sbjct: 63 NDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV 122
Query: 118 HRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNV 177
+ + FT+ F++K +++HA + K+G+++D V N L+++Y +
Sbjct: 123 FAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMK-LGCA 181
Query: 178 VFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSA 237
A KVF+E+P+R ++ W S+I+GY G G L LF M++ +P + +S L A
Sbjct: 182 WDAEKVFEEMPER-DIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGA 240
Query: 238 CSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISA 297
CS + K+ + ++ S E+ V T ++ ++ K+G V + F+ +
Sbjct: 241 CSHVYSPKMGKEIH-----CHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMI- 294
Query: 298 AGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSL 357
+R +V WN MI Y ++G + F+ M ++ +P+ +T +++L A A +
Sbjct: 295 --QRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE---- 348
Query: 358 GKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIM 417
G+ +H Y + G ++ +L T+LIDMY +CG+L A+ +F+ K+V+ +N++I
Sbjct: 349 GRTIHGYAMRRGFLPHM----VLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIA 404
Query: 418 GLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQ----IFRDMSFS 473
NG+ AL LF ++ + L P++ T L A + S L GR+ I + +S
Sbjct: 405 AYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWS 464
Query: 474 TSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVS 533
++ L + + A G +E+A + + K + W +++ +H ++ +
Sbjct: 465 NTIILNS---LVHMYAMCGDLEDARKCFNHILLK-DVVSWNSIIMAYAVHGFGRISVWLF 520
Query: 534 KRLV--EVDPTSSGGYVMLANALAS---DRQWNDVSALRLEMREKGIKKQPG 580
++ V+P S +LA S D W +++ RE GI PG
Sbjct: 521 SEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMK---REYGI--DPG 567
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 153/489 (31%), Positives = 250/489 (51%), Gaps = 20/489 (4%)
Query: 146 QVHAHIQKMGYLNDPSVSNGLVAVYARGF--RNVVFARKVFDEIPDRSEVTCWTSLITGY 203
Q+HA + + + + V + ++ A R++ ++ +VF + + + C T +I +
Sbjct: 29 QIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNT-MIRAF 87
Query: 204 AQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSN 263
+ S E +LF + R + P N S C ++ + + ++ D
Sbjct: 88 SLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCC-IKSGDLLGGLQIHGKIFSD---- 142
Query: 264 GESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGL 323
G + T L+ L+ N + + FD I KR V WN + S Y+++ + L
Sbjct: 143 GFLSDSLLMTTLMDLYSTCENSTDACKVFDEIP---KRDTVSWNVLFSCYLRNKRTRDVL 199
Query: 324 SLFRIMVKE--GTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILA 381
LF M + G +P+ VT + L ACA +G L GK VH+++ G G + L+
Sbjct: 200 VLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALN----LS 255
Query: 382 TSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQ 441
+L+ MYS+CG +D+A +VF ++VV + A+I GLA+NG G++A+ F +M +FG+
Sbjct: 256 NTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGIS 315
Query: 442 PNAGTFLGALSACSHSGFLERGRQIFRDM---SFSTSLTLEHYACYIDLLARVGCIEEAI 498
P T G LSACSHSG + G F M F L HY C +DLL R +++A
Sbjct: 316 PEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAY 375
Query: 499 EVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDR 558
++ SM KP++ +W LLG C +H VEL + V L+E+ +G YV+L N ++
Sbjct: 376 SLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVG 435
Query: 559 QWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMK 618
+W V+ LR M+EK I +PG S I + G VHEF+V +SHP+ E IY L + + +K
Sbjct: 436 KWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLK 495
Query: 619 APSHCQSVS 627
+ ++
Sbjct: 496 IAGYVAEIT 504
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 206/457 (45%), Gaps = 39/457 (8%)
Query: 22 SSCSIVDHTPTTFTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPPRIAL-- 79
SS S DH +L+ + HL QIHA + + ++ + + H+ R+AL
Sbjct: 6 SSSSGDDH----LLSLIVSSTGKLHLRQIHALLLRTSLIRN----SDVFHHFLSRLALSL 57
Query: 80 ---------RVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAP-NDFTFS 129
RVF NP + N +IR + F LF L+ P N + S
Sbjct: 58 IPRDINYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSS 117
Query: 130 FLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPD 189
F LK C +S D Q+H I G+L+D + L+ +Y+ N A KVFDEIP
Sbjct: 118 FALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYST-CENSTDACKVFDEIPK 176
Query: 190 RSEVTCWTSLITGYAQSGHGEEVLQLFHMM---VRQNLRPQNDTMVSVLSACSSLEISKI 246
R V+ W L + Y ++ +VL LF M V ++P T + L AC++L
Sbjct: 177 RDTVS-WNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDF 235
Query: 247 ERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPW 306
+ V+ + ID+ NG S +++ LV ++ + G+++K+ + F +R VV W
Sbjct: 236 GKQVH---DFIDE---NGLSGALNLSNTLVSMYSRCGSMDKAYQVF---YGMRERNVVSW 286
Query: 307 NAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLI 366
A+IS +G E + F M+K G + P T+ +LSAC+ G ++ G + +
Sbjct: 287 TALISGLAMNGFGKEAIEAFNEMLKFGIS-PEEQTLTGLLSACSHSGLVAEGMMFFDRMR 345
Query: 367 SIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSK-DVVLFNAMIMGLAVNGEG 425
S K I N ++D+ + LD+A + + K D ++ ++ V+G+
Sbjct: 346 SGEFK--IKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDV 403
Query: 426 EDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLER 462
E R+ + E + AG ++ L+ S G E+
Sbjct: 404 ELGERVISHLIELKAE-EAGDYVLLLNTYSTVGKWEK 439
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 171/552 (30%), Positives = 276/552 (50%), Gaps = 42/552 (7%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHYPPR----IALRVFHYLHN---PNIFPFNAIIRVLA 101
Q+HA +F+ G + D+ +A LI Y ++ +VF L + NI N +I +
Sbjct: 372 QVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFS 429
Query: 102 EQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKV--CFRSKDARCAEQVHAHIQKMGYLND 159
+ LF + L ++F+ LL V C +QVH + K G + D
Sbjct: 430 QSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLN-----LGKQVHGYTLKSGLVLD 484
Query: 160 PSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMM 219
+V + L +Y++ ++ + K+F IP + CW S+I+G+ + G+ E + LF M
Sbjct: 485 LTVGSSLFTLYSKC-GSLEESYKLFQGIPFKDN-ACWASMISGFNEYGYLREAIGLFSEM 542
Query: 220 VRQNLRPQNDTMVSVLSACSS---LEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLV 276
+ P T+ +VL+ CSS L K E Y L ID G + LV
Sbjct: 543 LDDGTSPDESTLAAVLTVCSSHPSLPRGK-EIHGYTLRAGIDKGMDLG--------SALV 593
Query: 277 YLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTR 336
++ K G+++ +R+ +DR+ + V +++IS Y Q G +G LFR MV G T
Sbjct: 594 NMYSKCGSLKLARQVYDRLP---ELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTM 650
Query: 337 PNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDR 396
+ + S+L A A + SLG VH Y+ IG + + + +SL+ MYSK G +D
Sbjct: 651 -DSFAISSILKAAALSDESSLGAQVHAYITKIG----LCTEPSVGSSLLTMYSKFGSIDD 705
Query: 397 AKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSH 456
+ F D++ + A+I A +G+ +AL+++ M E G +P+ TF+G LSACSH
Sbjct: 706 CCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSH 765
Query: 457 SGFLERGRQIFRDMSFSTSLTLE--HYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWG 514
G +E M + E HY C +D L R G + EA + +M KP+ VWG
Sbjct: 766 GGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWG 825
Query: 515 ALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKG 574
LL C +H VEL + +K+ +E++P+ +G Y+ L+N LA +W++V R M+ G
Sbjct: 826 TLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTG 885
Query: 575 IKKQPGSSWISV 586
++K+PG W SV
Sbjct: 886 VQKEPG--WSSV 895
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 195/393 (49%), Gaps = 27/393 (6%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
A +VF + N++ +N II + VF LF+++ P+ +T+S +L C
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACAS 263
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWT 197
+ R + V A + K G D V +V +YA+ ++ A +VF IP+ S V+ WT
Sbjct: 264 LEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKC-GHMAEAMEVFSRIPNPSVVS-WT 320
Query: 198 SLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSS----LEISKIERWVYFL 253
+++GY +S L++F M + N T+ SV+SAC E S++ WV+
Sbjct: 321 VMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVF-- 378
Query: 254 SELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAY 313
+G SV L+ ++ K G+++ S + F+ + ++ +V N MI+++
Sbjct: 379 --------KSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSF 428
Query: 314 VQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGN 373
Q P + + LF M++EG R + ++ S+LS + L+LGK VH Y + K
Sbjct: 429 SQSKKPGKAIRLFTRMLQEG-LRTDEFSVCSLLSV---LDCLNLGKQVHGYTL----KSG 480
Query: 374 IGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFY 433
+ + + +SL +YSKCG L+ + ++F+ KD + +MI G G +A+ LF
Sbjct: 481 LVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFS 540
Query: 434 KMPEFGLQPNAGTFLGALSACSHSGFLERGRQI 466
+M + G P+ T L+ CS L RG++I
Sbjct: 541 EMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEI 573
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 121/495 (24%), Positives = 230/495 (46%), Gaps = 27/495 (5%)
Query: 50 IHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQGH 105
+ AR+ + GA +D + T ++ Y A+ VF + NP++ + ++ +
Sbjct: 273 VQARVIKCGA-EDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSND 331
Query: 106 VSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNG 165
+F +++H + N+ T + ++ C R A QVHA + K G+ D SV+
Sbjct: 332 AFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAA 391
Query: 166 LVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLR 225
L+++Y++ ++ + +VF+++ D +IT ++QS + ++LF M+++ LR
Sbjct: 392 LISMYSKS-GDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLR 450
Query: 226 PQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNV 285
++ S+LS L + K S L+ D T V + L L+ K G++
Sbjct: 451 TDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLT---------VGSSLFTLYSKCGSL 501
Query: 286 EKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSV 345
E+S + F I + W +MIS + + G E + LF M+ +GT+ P+ T+ +V
Sbjct: 502 EESYKLFQGIPF---KDNACWASMISGFNEYGYLREAIGLFSEMLDDGTS-PDESTLAAV 557
Query: 346 LSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAV 405
L+ C+ L GK +H Y + G I L ++L++MYSKCG L A++V++
Sbjct: 558 LTVCSSHPSLPRGKEIHGYTLRAG----IDKGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Query: 406 SKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQ 465
D V +++I G + +G +D LF M G ++ L A + S G Q
Sbjct: 614 ELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQ 673
Query: 466 IFRDMSFSTSLTLEHY--ACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLH 523
+ ++ L E + + + ++ G I++ + + + P+ W AL+ H
Sbjct: 674 VHAYIT-KIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQIN-GPDLIAWTALIASYAQH 731
Query: 524 SRVELAQEVSKRLVE 538
+ A +V + E
Sbjct: 732 GKANEALQVYNLMKE 746
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 133/289 (46%), Gaps = 20/289 (6%)
Query: 180 ARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACS 239
A K+FD IP V+C +I+GY Q EE L+ F M + SV+SACS
Sbjct: 103 AAKLFDTIPQPDVVSC-NIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACS 161
Query: 240 SLEISKIERWVYFLSELIDDST-SNGESCHDSVNTVLVYLFGKWGNVEKSRERF-DRISA 297
+L+ SEL+ T G ++ V + L+ +F K E + + F D +SA
Sbjct: 162 ALQAP-------LFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSA 214
Query: 298 AGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSL 357
V WN +I+ +++ LF M G +P+ T SVL+ACA + L
Sbjct: 215 ----NVYCWNTIIAGALRNQNYGAVFDLFHEMCV-GFQKPDSYTYSSVLAACASLEKLRF 269
Query: 358 GKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIM 417
GK V +I G + + T+++D+Y+KCG + A EVF + VV + M+
Sbjct: 270 GKVVQARVIKCG-----AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLS 324
Query: 418 GLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQI 466
G + + AL +F +M G++ N T +SAC + Q+
Sbjct: 325 GYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQV 373
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 167/617 (27%), Positives = 303/617 (49%), Gaps = 30/617 (4%)
Query: 15 CYLLPFRSSCSIVDHTPTTFTNLLQG--HIPRSHL-LQIHARIFQLGAHQDNLLATRLIG 71
C + S S VD +F+ LL+G + R L Q+H + + G + + + L+
Sbjct: 87 CLFTCMKRSGSDVD--GYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVD 144
Query: 72 HYPP--RI--ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDF- 126
Y R+ A F + PN +NA+I + + F L ++ + D
Sbjct: 145 MYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAG 204
Query: 127 TFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDE 186
TF+ LL + +QVHA + K+G ++ ++ N +++ YA +V A++VFD
Sbjct: 205 TFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYA-DCGSVSDAKRVFDG 263
Query: 187 IPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKI 246
+ ++ W S+I G+++ E +LF M R + T +LSACS
Sbjct: 264 LGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSG------ 317
Query: 247 ERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKW--GNVEKSRERFDRISAAGKRGVV 304
E F L G S L+ ++ ++ G +E + F+ + + + ++
Sbjct: 318 EEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKS---KDLI 374
Query: 305 PWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEY 364
WN++I+ + Q G + + F + + + + ++L +C+ + L LG+ +H
Sbjct: 375 SWNSIITGFAQKGLSEDAVKFFSYL-RSSEIKVDDYAFSALLRSCSDLATLQLGQQIH-- 431
Query: 365 LISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSK-DVVLFNAMIMGLAVNG 423
++ K SN+ + +SLI MYSKCG ++ A++ F+ SK V +NAMI+G A +G
Sbjct: 432 --ALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHG 489
Query: 424 EGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMS--FSTSLTLEHY 481
G+ +L LF +M ++ + TF L+ACSH+G ++ G ++ M + +EHY
Sbjct: 490 LGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHY 549
Query: 482 ACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDP 541
A +DLL R G + +A E++ SMP P+ V LG C +E+A +V+ L+E++P
Sbjct: 550 AAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEP 609
Query: 542 TSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHP 601
YV L++ + ++W + ++++ M+E+G+KK PG SWI + V F S+P
Sbjct: 610 EDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNP 669
Query: 602 QIEGIYLTLTGLAKHMK 618
+ IY+ + L + M+
Sbjct: 670 LCQDIYMMIKDLTQEMQ 686
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 172/379 (45%), Gaps = 24/379 (6%)
Query: 147 VHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQS 206
H + K G ++D VSN ++ Y + F + +A +FDE+P R V+ W ++I+GY
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIK-FGFLGYANMLFDEMPKRDSVS-WNTMISGYTSC 79
Query: 207 GHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGES 266
G E+ LF M R + +L +S++ + V+ L G
Sbjct: 80 GKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGL------VIKGGYE 133
Query: 267 CHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLF 326
C+ V + LV ++ K VE + E F IS V WNA+I+ +VQ L
Sbjct: 134 CNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNS---VSWNALIAGFVQVRDIKTAFWLL 190
Query: 327 RIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLID 386
+M + + T +L+ +L K VH ++ +G + I + ++I
Sbjct: 191 GLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEI----TICNAMIS 246
Query: 387 MYSKCGRLDRAKEVFEH-AVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAG 445
Y+ CG + AK VF+ SKD++ +N+MI G + + E A LF +M ++ +
Sbjct: 247 SYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIY 306
Query: 446 TFLGALSACS---HSGFLER--GRQIFRDMSFSTSLTLEHYACYIDLLARVGCIEEAIEV 500
T+ G LSACS H F + G I + + TS T + YI G +E+A+ +
Sbjct: 307 TYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQF--PTGTMEDALSL 364
Query: 501 VTSMPFKPNNFVWGALLGG 519
S+ K + W +++ G
Sbjct: 365 FESLKSK-DLISWNSIITG 382
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 118/275 (42%), Gaps = 20/275 (7%)
Query: 281 KWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHV 340
K+G + + FD + KR V WN MIS Y G + LF M + G+ +
Sbjct: 47 KFGFLGYANMLFDEMP---KRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGY- 102
Query: 341 TMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEV 400
+ +L A + LG+ VH +I G++ N+ + +SL+DMY+KC R++ A E
Sbjct: 103 SFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNV----YVGSSLVDMYAKCERVEDAFEA 158
Query: 401 FEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMP-EFGLQPNAGTFLGALSACSHSGF 459
F+ + V +NA+I G + + A L M + + +AGTF L+ F
Sbjct: 159 FKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMF 218
Query: 460 LERGRQIFRDMSFSTSLTLEHYA----CYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGA 515
+Q+ + L L+H I A G + +A V + + W +
Sbjct: 219 CNLLKQVHAKV---LKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNS 275
Query: 516 LLGGCLLH----SRVELAQEVSKRLVEVDPTSSGG 546
++ G H S EL ++ + VE D + G
Sbjct: 276 MIAGFSKHELKESAFELFIQMQRHWVETDIYTYTG 310
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 150/467 (32%), Positives = 240/467 (51%), Gaps = 39/467 (8%)
Query: 179 FARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLR-PQNDTMVSVLSA 237
+A ++F+++ + V + S+I Y + +V++++ ++R++ P T + +
Sbjct: 60 YATRLFNQVSN-PNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKS 118
Query: 238 CSSL------------------------EISKIERWVYFLSELIDDSTSNGESCHDSVNT 273
C+SL E + I+ ++ F +L+D E V +
Sbjct: 119 CASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKF-DDLVDAHKVFDEMYERDVIS 177
Query: 274 --VLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVK 331
L+ + + G ++K++ F + + +V W AMIS Y GC VE + FR M
Sbjct: 178 WNSLLSGYARLGQMKKAKGLFHLML---DKTIVSWTAMISGYTGIGCYVEAMDFFREMQL 234
Query: 332 EGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKC 391
G P+ ++++SVL +CAQ+G L LGKW+H Y G G + +LI+MYSKC
Sbjct: 235 AGI-EPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTG----VCNALIEMYSKC 289
Query: 392 GRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGAL 451
G + +A ++F KDV+ ++ MI G A +G A+ F +M ++PN TFLG L
Sbjct: 290 GVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLL 349
Query: 452 SACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPN 509
SACSH G + G + F M + +EHY C ID+LAR G +E A+E+ +MP KP+
Sbjct: 350 SACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPD 409
Query: 510 NFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLE 569
+ +WG+LL C +++A LVE++P G YV+LAN A +W DVS LR
Sbjct: 410 SKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKM 469
Query: 570 MREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKH 616
+R + +KK PG S I V+ +V EF+ G S P I + L H
Sbjct: 470 IRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQLFTSH 516
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 181/404 (44%), Gaps = 53/404 (13%)
Query: 34 FTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPPRI-----ALRVFHYLHNP 88
F LQ R+ +I+A I G Q + + T+++ + +I A R+F+ + NP
Sbjct: 13 FIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMV-DFCDKIEDMDYATRLFNQVSNP 71
Query: 89 NIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLA-PNDFTFSFLLKVCFRSKDARCAEQV 147
N+F +N+IIR V ++ L + P+ FTF F+ K C +QV
Sbjct: 72 NVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQV 131
Query: 148 HAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSG 207
H H+ K G N L+ +Y + F ++V A KVFDE+ +R +V W SL++GYA+ G
Sbjct: 132 HGHLCKFGPRFHVVTENALIDMYMK-FDDLVDAHKVFDEMYER-DVISWNSLLSGYARLG 189
Query: 208 HGEEVLQLFHMMVRQN-------------------------------LRPQNDTMVSVLS 236
++ LFH+M+ + + P +++SVL
Sbjct: 190 QMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLP 249
Query: 237 ACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRIS 296
+C+ L ++ +W++ +E G V L+ ++ K G + ++ + F ++
Sbjct: 250 SCAQLGSLELGKWIHLYAE------RRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQME 303
Query: 297 AAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLS 356
+ V+ W+ MIS Y G + F M + +PN +T + +LSAC+ +G
Sbjct: 304 G---KDVISWSTMISGYAYHGNAHGAIETFNEM-QRAKVKPNGITFLGLLSACSHVGMWQ 359
Query: 357 LGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEV 400
G Y + I LID+ ++ G+L+RA E+
Sbjct: 360 EGL---RYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEI 400
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 127/296 (42%), Gaps = 48/296 (16%)
Query: 273 TVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKE 332
T +V K +++ + F+++S V +N++I AY + + + +++ ++++
Sbjct: 46 TKMVDFCDKIEDMDYATRLFNQVSNPN---VFLYNSIIRAYTHNSLYCDVIRIYKQLLRK 102
Query: 333 GTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCG 392
P+ T + +CA +G LGK VH +L G + ++ + +LIDMY K
Sbjct: 103 SFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHV----VTENALIDMYMKFD 158
Query: 393 RLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGE-------------------------- 426
L A +VF+ +DV+ +N+++ G A G+ +
Sbjct: 159 DLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTG 218
Query: 427 -----DALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIF-----RDMSFSTSL 476
+A+ F +M G++P+ + + L +C+ G LE G+ I R T +
Sbjct: 219 IGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGV 278
Query: 477 TLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEV 532
I++ ++ G I +AI++ M K + W ++ G H A E
Sbjct: 279 C----NALIEMYSKCGVISQAIQLFGQMEGK-DVISWSTMISGYAYHGNAHGAIET 329
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 184/604 (30%), Positives = 290/604 (48%), Gaps = 71/604 (11%)
Query: 29 HTPTTFTN------LLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPP--RI--A 78
TP F + LL G++ R+ R+FQ A ++ + + ++ Y RI A
Sbjct: 169 ETPVKFRDSVASNVLLSGYL-RAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDA 227
Query: 79 LRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHR-VLAPNDFTFSFLLKVCFR 137
+F + N+ + A+I + G F LF ++ + N T + + K C
Sbjct: 228 RSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRD 287
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYAR-GFRNVVFARKVFDEIPDRSEVTCW 196
R Q+H + +M D + N L+++Y++ G+ A+ VF + ++ V+ W
Sbjct: 288 FVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGE--AKAVFGVMKNKDSVS-W 344
Query: 197 TSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSEL 256
SLITG Q E +LF M P D MVS W
Sbjct: 345 NSLITGLVQRKQISEAYELFEKM------PGKD-MVS---------------W------- 375
Query: 257 IDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQD 316
T ++ F G + K E F + ++ + W AMISA+V +
Sbjct: 376 ----------------TDMIKGFSGKGEISKCVELFGMMP---EKDNITWTAMISAFVSN 416
Query: 317 GCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGS 376
G E L F M+++ PN T SVLSA A + DL G +H ++ K NI +
Sbjct: 417 GYYEEALCWFHKMLQKEVC-PNSYTFSSVLSATASLADLIEGLQIHGRVV----KMNIVN 471
Query: 377 NQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMP 436
+ + SL+ MY KCG + A ++F ++V +N MI G + NG G+ AL+LF +
Sbjct: 472 DLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLE 531
Query: 437 EFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCI 494
G +PN TFL LSAC H G+++ G + F+ M S++ +HYAC +DLL R G +
Sbjct: 532 SSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLL 591
Query: 495 EEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANAL 554
++A ++++MP KP++ VWG+LL H RV+LA+ +K+L+E++P S+ YV+L+
Sbjct: 592 DDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLY 651
Query: 555 ASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLA 614
+ + D + + K IKK PGSSWI + G VH FL G S +E I TL +
Sbjct: 652 SIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGFTLKMIR 711
Query: 615 KHMK 618
K M+
Sbjct: 712 KEME 715
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 128/317 (40%), Gaps = 62/317 (19%)
Query: 283 GNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTM 342
GN++++ F ++S R +V W AMISAY ++G + +F M TT N +
Sbjct: 64 GNLQEAEAIFRQMS---NRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMIT 120
Query: 343 VSVLSACAQ----------------------IGDLSLGKWVH-EYLIS---IGHKGNIGS 376
+ + C G + G++ E+L + + + ++ S
Sbjct: 121 AMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVAS 180
Query: 377 NQILA--------------------------TSLIDMYSKCGRLDRAKEVFEHAVSKDVV 410
N +L+ +S++ Y K GR+ A+ +F+ ++V+
Sbjct: 181 NVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVI 240
Query: 411 LFNAMIMGLAVNGEGEDALRLFYKMPEFG-LQPNAGTFLGALSACSHSGFLERGRQI--- 466
+ AMI G G ED LF +M + G ++ N+ T AC G QI
Sbjct: 241 TWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGL 300
Query: 467 FRDMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRV 526
M L L + + + +++G + EA V M K ++ W +L+ G + ++
Sbjct: 301 VSRMPLEFDLFLGN--SLMSMYSKLGYMGEAKAVFGVMKNK-DSVSWNSLITGLVQRKQI 357
Query: 527 ELAQEVSKRLVEVDPTS 543
A E+ +++ D S
Sbjct: 358 SEAYELFEKMPGKDMVS 374
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 158/532 (29%), Positives = 273/532 (51%), Gaps = 32/532 (6%)
Query: 80 RVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSK 139
R+ + + F + ++R L++ ++ D+ + + P+ + +L+ C + +
Sbjct: 59 RILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKME 118
Query: 140 DARCAEQVHAHIQKMGYLNDPSVSNGLVAVYAR-GFRNVVFARKVFDEIPDRSEVTCWTS 198
+ + +HA K G V GLV +Y+R G+ + A+K FD+I +++ V+ W S
Sbjct: 119 NMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGY--IELAKKAFDDIAEKNTVS-WNS 175
Query: 199 LITGYAQSGHGEEVLQLFHMMVRQNLRPQN---------DTMVSVLSACSSLEISKIERW 249
L+ GY +SG +E ++F + ++ N M + S S++ + W
Sbjct: 176 LLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASW 235
Query: 250 VYFLSELID-DSTSNGESCHDSV---NTV----LVYLFGKWGNVEKSRERFDRISAAGKR 301
+ ++ + D++ N V ++ + K G+V+ + E F +S K+
Sbjct: 236 NILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMS---KK 292
Query: 302 GVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGT-TRPNHVTMVSVLSACAQIGDLSLGKW 360
+ ++AMI+ Y Q+G P + L LF M++ + +P+ +T+ SV+SA +Q+G+ S G W
Sbjct: 293 DKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTW 352
Query: 361 VHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLA 420
V Y+ G I + +L+TSLID+Y K G +A ++F + KD V ++AMIMG
Sbjct: 353 VESYITEHG----IKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCG 408
Query: 421 VNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM-SFSTSLTLE 479
+NG +A LF M E + PN TF G LSA SHSG ++ G + F M + + +
Sbjct: 409 INGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSAD 468
Query: 480 HYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEV 539
HY +D+L R G +EEA E++ SMP +PN VWGALL LH+ VE + V++
Sbjct: 469 HYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKL 528
Query: 540 DPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVH 591
+ +G LA +S +W+D +R ++EK + K G SW V+G H
Sbjct: 529 ETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSW--VEGSYH 578
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 102/459 (22%), Positives = 194/459 (42%), Gaps = 81/459 (17%)
Query: 125 DFTFSFLLKVCFRSKDARCAEQVHAH--IQKMGYLNDPSVSNGLVAVYARGFRNVV-FAR 181
D F L+ C + A+ QVHA + + +L +P + + + RN+V + +
Sbjct: 3 DSKLRFFLQRCVVLEQAK---QVHAQLVVNRYNHL-EPILVHQTLHFTKEFSRNIVTYVK 58
Query: 182 KVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSL 241
++ + W L+ +Q +E + ++ M + P + + SVL AC +
Sbjct: 59 RILKGFNGHDSFS-WGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKM 117
Query: 242 EISKIERWVYFLSELIDDSTSNGESCHDS------VNTVLVYLFGKWGNVEKSRERFDRI 295
E ++D + ++ + V T LV L+ + G +E +++ FD I
Sbjct: 118 E------------NMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDI 165
Query: 296 SAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDL 355
+ ++ V WN+++ Y++ G E +F + + V+ ++S+ A+ GD+
Sbjct: 166 A---EKNTVSWNSLLHGYLESGELDEARRVF-----DKIPEKDAVSWNLIISSYAKKGDM 217
Query: 356 SLG---------KWVHEYLISIGHKGNIGSNQILAT--------------SLIDMYSKCG 392
K + I IG N ++ T ++I Y+K G
Sbjct: 218 GNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLG 277
Query: 393 RLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFG--LQPNAGTFLGA 450
+ A+E+F KD ++++AMI NG+ +DAL+LF +M E +QP+ T
Sbjct: 278 DVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSV 337
Query: 451 LSACSHSG-----------FLERGRQIFRDMSFSTSLTLEHYACYIDLLARVGCIEEAIE 499
+SA S G E G +I D STSL IDL + G +A +
Sbjct: 338 VSANSQLGNTSFGTWVESYITEHGIKI--DDLLSTSL--------IDLYMKGGDFAKAFK 387
Query: 500 VVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVE 538
+ +++ K + + A++ GC ++ A + ++E
Sbjct: 388 MFSNLN-KKDTVSYSAMIMGCGINGMATEANSLFTAMIE 425
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 152/335 (45%), Gaps = 42/335 (12%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
A RVF + + +N II A++G + + SLF+ + + A + + C
Sbjct: 189 ARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVN-CRE 247
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWT 197
K AR + ++ +++ Y + +V A ++F + + ++ +
Sbjct: 248 MKLARTYFDAMPQKNGVSWIT-------MISGYTK-LGDVQSAEELFRLMSKKDKLV-YD 298
Query: 198 SLITGYAQSGHGEEVLQLFHMMVRQN--LRPQNDTMVSVLSACSSLEISKIERWV-YFLS 254
++I Y Q+G ++ L+LF M+ +N ++P T+ SV+SA S L + WV +++
Sbjct: 299 AMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYIT 358
Query: 255 ELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYV 314
E +G D ++T L+ L+ K G+ K+ + F ++ K+ V ++AMI
Sbjct: 359 E-------HGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLN---KKDTVSYSAMIMGCG 408
Query: 315 QDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKG-N 373
+G E SLF M+ E PN VT +LSA + H L+ G+K N
Sbjct: 409 INGMATEANSLFTAMI-EKKIPPNVVTFTGLLSA-----------YSHSGLVQEGYKCFN 456
Query: 374 IGSNQILATS------LIDMYSKCGRLDRAKEVFE 402
+ L S ++DM + GRL+ A E+ +
Sbjct: 457 SMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIK 491
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 158/524 (30%), Positives = 270/524 (51%), Gaps = 21/524 (4%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDL--KHRVLAPNDFTFSFLLKVC 135
A +F +N N+ +N ++ + +G F + + + ++ T + VC
Sbjct: 346 AQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVC 405
Query: 136 FRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTC 195
F +++H + K ++ + V+N VA YA+ ++ +A++VF I ++ V
Sbjct: 406 FHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAK-CGSLSYAQRVFHGIRSKT-VNS 463
Query: 196 WTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSE 255
W +LI G+AQS L M L P + T+ S+LSACS L+ ++ + V+
Sbjct: 464 WNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGF-- 521
Query: 256 LIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQ 315
+I + + SV ++ ++ G + + FD A + +V WN +I+ Y+Q
Sbjct: 522 IIRNWLERDLFVYLSVLSLYIHC----GELCTVQALFD---AMEDKSLVSWNTVITGYLQ 574
Query: 316 DGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIG 375
+G P L +FR MV G ++M+ V AC+ + L LG+ H Y + K +
Sbjct: 575 NGFPDRALGVFRQMVLYGIQLCG-ISMMPVFGACSLLPSLRLGREAHAYAL----KHLLE 629
Query: 376 SNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKM 435
+ +A SLIDMY+K G + ++ +VF K +NAMIMG ++G ++A++LF +M
Sbjct: 630 DDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEM 689
Query: 436 PEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGC 493
G P+ TFLG L+AC+HSG + G + M SF L+HYAC ID+L R G
Sbjct: 690 QRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQ 749
Query: 494 IEEAIEVVT-SMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLAN 552
+++A+ VV M + + +W +LL C +H +E+ ++V+ +L E++P YV+L+N
Sbjct: 750 LDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSN 809
Query: 553 ALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVG 596
A +W DV +R M E ++K G SWI ++ V F+VG
Sbjct: 810 LYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVG 853
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 204/453 (45%), Gaps = 47/453 (10%)
Query: 37 LLQGHIPRSHLLQIHARIFQLGA-----HQDNLLATRLIGHYP----PRIALRVFHYLHN 87
LLQ R + ++ +I QL + D++L TR+I Y P + VF L +
Sbjct: 90 LLQASGKRKDI-EMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRS 148
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRV-LAPNDFTFSFLLKVCFRSKDARCAEQ 146
N+F +NA+I + V F ++ L P+ FT+ ++K C D
Sbjct: 149 KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 208
Query: 147 VHAHIQKMGYLNDPSVSNGLVAVYA-RGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQ 205
VH + K G + D V N LV+ Y GF V A ++FD +P+R+ V+ W S+I ++
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGF--VTDALQLFDIMPERNLVS-WNSMIRVFSD 265
Query: 206 SGHGEEVLQLFHMMVRQN----LRPQNDTMVSVLSACS---SLEISK-IERWVYFL---S 254
+G EE L M+ +N P T+V+VL C+ + + K + W L
Sbjct: 266 NGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDK 325
Query: 255 ELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYV 314
EL+ +N L+ ++ K G + ++ F + VV WN M+ +
Sbjct: 326 ELV-------------LNNALMDMYSKCGCITNAQMIF---KMNNNKNVVSWNTMVGGFS 369
Query: 315 QDGCPVEGLSLFRIMVKEG-TTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGN 373
+G + R M+ G + + VT+++ + C L K +H Y + K
Sbjct: 370 AEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSL----KQE 425
Query: 374 IGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFY 433
N+++A + + Y+KCG L A+ VF SK V +NA+I G A + + +L
Sbjct: 426 FVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL 485
Query: 434 KMPEFGLQPNAGTFLGALSACSHSGFLERGRQI 466
+M GL P++ T LSACS L G+++
Sbjct: 486 QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEV 518
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 190/408 (46%), Gaps = 38/408 (9%)
Query: 127 TFSFLLKVCFRSKDARCAEQVHAHIQKMGYL-NDPSVSNGLVAVYARGFRNVVFARKVFD 185
LL+ + KD ++H + L ND + ++ +YA + +R VFD
Sbjct: 86 ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAM-CGSPDDSRFVFD 144
Query: 186 EIPDRSEVTCWTSLITGYAQSGHGEEVLQLF-HMMVRQNLRPQNDTMVSVLSACSSLEIS 244
+ ++ + W ++I+ Y+++ +EVL+ F M+ +L P + T V+ AC+ +
Sbjct: 145 ALRSKN-LFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDV 203
Query: 245 KIERWVYFL---SELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKR 301
I V+ L + L++D V LV +G G V + + FD + +R
Sbjct: 204 GIGLAVHGLVVKTGLVEDVF---------VGNALVSFYGTHGFVTDALQLFDIMP---ER 251
Query: 302 GVVPWNAMISAYVQDGCPVEGLSLFRIMVKE---GTTRPNHVTMVSVLSACAQIGDLSLG 358
+V WN+MI + +G E L M++E G P+ T+V+VL CA+ ++ LG
Sbjct: 252 NLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG 311
Query: 359 KWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMG 418
K VH + + + + +L +L+DMYSKCG + A+ +F+ +K+VV +N M+ G
Sbjct: 312 KGVHGWAVKL----RLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGG 367
Query: 419 LAVNGEGEDALRLFYKMPEFG--LQPNAGTFLGALSACSHSGFLERGRQIF-----RDMS 471
+ G+ + +M G ++ + T L A+ C H FL +++ ++
Sbjct: 368 FSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFV 427
Query: 472 FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGG 519
++ + A Y A+ G + A V + K N W AL+GG
Sbjct: 428 YNELVANAFVASY----AKCGSLSYAQRVFHGIRSKTVN-SWNALIGG 470
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 200/346 (57%), Gaps = 12/346 (3%)
Query: 273 TVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKE 332
T ++ + + G++ + F+ + +R V WNA+++A Q+G +E +SLFR M+ E
Sbjct: 197 TAMLSGYARSGDISNAVALFEDMP---ERDVPSWNAILAACTQNGLFLEAVSLFRRMINE 253
Query: 333 GTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCG 392
+ RPN VT+V VLSACAQ G L L K +H + ++ ++ S+ ++ SL+D+Y KCG
Sbjct: 254 PSIRPNEVTVVCVLSACAQTGTLQLAKGIHAF----AYRRDLSSDVFVSNSLVDLYGKCG 309
Query: 393 RLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGL---QPNAGTFLG 449
L+ A VF+ A K + +N+MI A++G E+A+ +F +M + + +P+ TF+G
Sbjct: 310 NLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIG 369
Query: 450 ALSACSHSGFLERGRQIFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFK 507
L+AC+H G + +GR F M+ F +EHY C IDLL R G +EA+EV+++M K
Sbjct: 370 LLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMK 429
Query: 508 PNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALR 567
+ +WG+LL C +H ++LA+ K LV ++P + G M+AN W + R
Sbjct: 430 ADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRAR 489
Query: 568 LEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGL 613
++ + K PG S I +D VH+F SHP+ E IY+ L L
Sbjct: 490 KMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 199/458 (43%), Gaps = 72/458 (15%)
Query: 45 SHLLQIHARIFQLGAHQDNLLATRLIGHYPPRI-----ALRVFHYLHNPNIFPFNAIIRV 99
+HL Q+ + + G + L +L+ R+ A +F PN + A++
Sbjct: 38 NHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTA 97
Query: 100 LAEQG--HVSHVFSLFNDLKHR-VLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGY 156
+ H S FS F + +R V PN F + +LK A VH H+ K G+
Sbjct: 98 YSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGF 157
Query: 157 LNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGE------ 210
V L+ YA ++ AR++FDE+ +R+ V WT++++GYA+SG
Sbjct: 158 HLYVVVQTALLHSYASSVSHITLARQLFDEMSERN-VVSWTAMLSGYARSGDISNAVALF 216
Query: 211 -------------------------EVLQLFHMMVRQ-NLRPQNDTMVSVLSACSSLEIS 244
E + LF M+ + ++RP T+V VLSAC+
Sbjct: 217 EDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTL 276
Query: 245 KIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVV 304
++ + ++ + D S+ V+ LV L+GK GN+E++ F A K+ +
Sbjct: 277 QLAKGIHAFAYRRDLSSD------VFVSNSLVDLYGKCGNLEEASSVFK---MASKKSLT 327
Query: 305 PWNAMISAYVQDGCPVEGLSLFRIMVKEGTT--RPNHVTMVSVLSACAQIGDLSLGKWVH 362
WN+MI+ + G E +++F M+K +P+H+T + +L+AC G +S G+
Sbjct: 328 AWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYF 387
Query: 363 EYLIS-------IGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSK-DVVLFNA 414
+ + + I H G LID+ + GR D A EV K D ++ +
Sbjct: 388 DLMTNRFGIEPRIEHYG----------CLIDLLGRAGRFDEALEVMSTMKMKADEAIWGS 437
Query: 415 MIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALS 452
++ ++G + A + L PN G ++ ++
Sbjct: 438 LLNACKIHGHLDLAEVAVKNL--VALNPNNGGYVAMMA 473
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 125/298 (41%), Gaps = 54/298 (18%)
Query: 284 NVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPV---EGLSLFRIMVKEGTTRPNHV 340
N+ +R FDR S + A+++AY P+ S FR+MV RPNH
Sbjct: 72 NLSYARFIFDRFSFPNTH---LYAAVLTAY-SSSLPLHASSAFSFFRLMVNRSVPRPNHF 127
Query: 341 TMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMY-SKCGRLDRAKE 399
VL + + VH +L G + ++ T+L+ Y S + A++
Sbjct: 128 IYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYV----VVQTALLHSYASSVSHITLARQ 183
Query: 400 VFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEF--------------------- 438
+F+ ++VV + AM+ G A +G+ +A+ LF MPE
Sbjct: 184 LFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEA 243
Query: 439 -----------GLQPNAGTFLGALSACSHSGFLERGRQIF-----RDMSFSTSLTLEHYA 482
++PN T + LSAC+ +G L+ + I RD+S ++
Sbjct: 244 VSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVS----N 299
Query: 483 CYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVD 540
+DL + G +EEA V M K + W +++ LH R E A V + +++++
Sbjct: 300 SLVDLYGKCGNLEEASSVF-KMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLN 356
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 162/590 (27%), Positives = 301/590 (51%), Gaps = 40/590 (6%)
Query: 48 LQIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQ 103
LQ+ + + + G D ++ I Y R A RVF + ++ +N+++ L+++
Sbjct: 194 LQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQE 253
Query: 104 GHVS-HVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSV 162
G +F D+ + + +F+ ++ C D + A Q+H K GY + V
Sbjct: 254 GTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEV 313
Query: 163 SNGLVAVYAR-GFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVR 221
N L++ Y++ G V + VF ++ +R+ V WT++I S + ++ + +F M
Sbjct: 314 GNILMSRYSKCGVLEAV--KSVFHQMSERN-VVSWTTMI-----SSNKDDAVSIFLNMRF 365
Query: 222 QNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGK 281
+ P T V +++A E K ++ L G SV + L+ K
Sbjct: 366 DGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLC------IKTGFVSEPSVGNSFITLYAK 419
Query: 282 WGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVT 341
+ +E +++ F+ I+ R ++ WNAMIS + Q+G E L +F E T PN T
Sbjct: 420 FEALEDAKKAFEDITF---REIISWNAMISGFAQNGFSHEALKMFLSAAAE--TMPNEYT 474
Query: 342 MVSVLSACAQIGDLSL--GKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKE 399
SVL+A A D+S+ G+ H +L+ +G + S +++++L+DMY+K G +D +++
Sbjct: 475 FGSVLNAIAFAEDISVKQGQRCHAHLLKLG----LNSCPVVSSALLDMYAKRGNIDESEK 530
Query: 400 VFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGF 459
VF K+ ++ ++I + +G+ E + LF+KM + + P+ TFL L+AC+ G
Sbjct: 531 VFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGM 590
Query: 460 LERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALL 517
+++G +IF M ++ + EHY+C +D+L R G ++EA E+++ +P P + ++L
Sbjct: 591 VDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSML 650
Query: 518 GGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKK 577
G C LH V++ +V++ +E+ P SG YV + N A +W+ + +R MR+K + K
Sbjct: 651 GSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSK 710
Query: 578 QPGSSWISVDG-----VVHEFLVGYLSHPQIEGIY--LTLTGLAKHMKAP 620
+ G SWI V + F G SHP+ + IY + + GL +++
Sbjct: 711 EAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLEGK 760
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 177/403 (43%), Gaps = 39/403 (9%)
Query: 124 NDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARG--FRNVVFAR 181
++ T LK C D + Q+H G+ + VSN ++ +Y + F N A
Sbjct: 77 DEVTLCLALKAC--RGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDN---AL 131
Query: 182 KVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSL 241
+F+ + D +V W ++++G+ + + L M + T + LS C
Sbjct: 132 CIFENLVD-PDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGS 187
Query: 242 EISKIERWVYFLSELIDDST--SNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG 299
E FL L ST G V + ++ + G+ +R FD +S
Sbjct: 188 E--------GFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSF-- 237
Query: 300 KRGVVPWNAMISAYVQDGC-PVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLG 358
+ ++ WN+++S Q+G E + +FR M++EG +HV+ SV++ C DL L
Sbjct: 238 -KDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREG-VELDHVSFTSVITTCCHETDLKLA 295
Query: 359 KWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMG 418
+ +H I G++ + I L+ YSKCG L+ K VF ++VV + MI
Sbjct: 296 RQIHGLCIKRGYESLLEVGNI----LMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-- 349
Query: 419 LAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTL 478
+ +DA+ +F M G+ PN TF+G ++A + ++ G +I + T
Sbjct: 350 ---SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKI-HGLCIKTGFVS 405
Query: 479 EHYA--CYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGG 519
E +I L A+ +E+A + + F+ W A++ G
Sbjct: 406 EPSVGNSFITLYAKFEALEDAKKAFEDITFRE-IISWNAMISG 447
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 17/228 (7%)
Query: 297 AAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEG--TTRPNHVTMVSVLSACAQIGD 354
++ + N IS ++ P LS+F+ ++ G + VT+ L AC GD
Sbjct: 34 SSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKACR--GD 91
Query: 355 LSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNA 414
L G +H + + G + ++ +++ MY K GR D A +FE+ V DVV +N
Sbjct: 92 LKRGCQIHGFSTTSGFTSFV----CVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNT 147
Query: 415 MIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHS-GFLERGRQIFRDMSFS 473
++ G N + AL +M G+ +A T+ ALS C S GFL G Q+ +
Sbjct: 148 ILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFL-LGLQL-QSTVVK 202
Query: 474 TSLTLEHYA--CYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGG 519
T L + +I + +R G A V M FK + W +LL G
Sbjct: 203 TGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFK-DMISWNSLLSG 249
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 170/579 (29%), Positives = 283/579 (48%), Gaps = 48/579 (8%)
Query: 64 LLATRLIGHYPPR----IALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHR 119
+LAT LI Y + A +F + + ++ + A+I A + + + F+++ +
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 120 VLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVF 179
+PN+FT S +LK C K VH + K+G V N ++ +YA +
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 180 ARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACS 239
A +F +I +++VT WT+LITG+ G G L+++ M+ +N + + A +
Sbjct: 166 ACLIFRDIKVKNDVT-WTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASA 224
Query: 240 SLEISKIERWVYFLSELIDDSTSNGESCHDSV------------NTVLVYLFGKWGNVEK 287
S+ DS + G+ H SV N++L L+ + G + +
Sbjct: 225 SI-----------------DSVTTGKQIHASVIKRGFQSNLPVMNSILD-LYCRCGYLSE 266
Query: 288 SRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLS 347
++ F + + ++ WN +IS ++ E L +F+ +G PN T S+++
Sbjct: 267 AKHYFHEME---DKDLITWNTLISE-LERSDSSEALLMFQRFESQGFV-PNCYTFTSLVA 321
Query: 348 ACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSK 407
ACA I L+ G+ +H + G N+ LA +LIDMY+KCG + ++ VF V +
Sbjct: 322 ACANIAALNCGQQLHGRIFRRGFNKNVE----LANALIDMYAKCGNIPDSQRVFGEIVDR 377
Query: 408 -DVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQI 466
++V + +M++G +G G +A+ LF KM G++P+ F+ LSAC H+G +E+G +
Sbjct: 378 RNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKY 437
Query: 467 FRDMSFSTSLTLEH--YACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHS 524
F M + + Y C +DLL R G I EA E+V MPFKP+ WGA+LG C H
Sbjct: 438 FNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHK 497
Query: 525 RVELAQEVSKRLV-EVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSW 583
L ++ R V E+ P G YVML+ A++ +W D + +R MR G KK+ G SW
Sbjct: 498 HNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSW 557
Query: 584 ISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMKAPSH 622
I V+ V F V P +Y L L + + +
Sbjct: 558 ILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGY 596
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 130/269 (48%), Gaps = 15/269 (5%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHYPPRI-----ALRVFHYLHNPNIFPFNAIIRVLAEQ 103
QIHA + + G Q NL I R A FH + + ++ +N +I L E+
Sbjct: 234 QIHASVIKRG-FQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISEL-ER 291
Query: 104 GHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVS 163
S +F + + PN +TF+ L+ C C +Q+H I + G+ + ++
Sbjct: 292 SDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELA 351
Query: 164 NGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQN 223
N L+ +YA+ N+ +++VF EI DR + WTS++ GY G+G E ++LF MV
Sbjct: 352 NALIDMYAK-CGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSG 410
Query: 224 LRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWG 283
+RP ++VLSAC + +E+ + + + + + N + D N V V L G+ G
Sbjct: 411 IRPDRIVFMAVLSACRHAGL--VEKGLKYFNVMESEYGINPD--RDIYNCV-VDLLGRAG 465
Query: 284 NVEKSRERFDRISAAGKRGVVPWNAMISA 312
+ ++ E +R+ K W A++ A
Sbjct: 466 KIGEAYELVERMPF--KPDESTWGAILGA 492
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 179/692 (25%), Positives = 303/692 (43%), Gaps = 126/692 (18%)
Query: 48 LQIHARIFQLG-AHQDNLLATRLIGHYPPRIAL----RVFHYLHNPNIFPFNAIIRVLAE 102
L IH + + G + D + + +G Y ++L ++F + + +N I+ V
Sbjct: 7 LTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLR 66
Query: 103 QGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSV 162
G+ LF +++ D T LL+VC + Q+H ++ ++G ++ S+
Sbjct: 67 SGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSM 126
Query: 163 SNGLVAVYARGFRNVVFARKVFDEIPDRS------------------------------- 191
N L+ +Y+R + + +RKVF+ + DR+
Sbjct: 127 CNSLIVMYSRNGK-LELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 192 ---EVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSS---LEISK 245
++ W SL++GYA G ++ + + M L+P ++ S+L A + L++ K
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Query: 246 IERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG------ 299
++L D V T L+ ++ K G + +R FD + A
Sbjct: 246 AIHGYILRNQLWYDVY---------VETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNS 296
Query: 300 ----------------------KRGVVP----WNAMISAYVQDGCPVEGLSLFRIMVKEG 333
K G+ P WN++ S Y G P + L + M ++G
Sbjct: 297 LVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKG 356
Query: 334 TTRPNHVTMVSVLSACAQIGD--------------------------------LSL---G 358
PN V+ ++ S C++ G+ LSL G
Sbjct: 357 VA-PNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSG 415
Query: 359 KWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMG 418
K VH + + + N+ + +AT+L+DMY K G L A E+F +K + +N M+MG
Sbjct: 416 KEVHGFCL----RKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMG 471
Query: 419 LAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMS--FSTSL 476
A+ G GE+ + F M E G++P+A TF LS C +SG ++ G + F M +
Sbjct: 472 YAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIP 531
Query: 477 TLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRL 536
T+EH +C +DLL R G ++EA + + +M KP+ +WGA L C +H +ELA+ KRL
Sbjct: 532 TIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRL 591
Query: 537 VEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVG 596
++P +S Y+M+ N ++ +W DV +R MR ++ Q SWI +D VH F
Sbjct: 592 QVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAE 651
Query: 597 YLSHPQIEGIYLTLTGLAKHMKAPSHCQSVSC 628
+HP IY L L MK + SC
Sbjct: 652 GKTHPDEGDIYFELYKLVSEMKKSGYVPDTSC 683
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 239 bits (610), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 171/592 (28%), Positives = 291/592 (49%), Gaps = 58/592 (9%)
Query: 31 PTTFTNLLQGHIPRSHLL---QIHARIFQLGAHQDNLLATRLIGHYPPRIAL---RVFHY 84
P T T +L H RS +IH + + G + + ++ Y +L ++F
Sbjct: 125 PNTSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLSARKLFDE 184
Query: 85 LHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRV-LAPNDFTFSFLLKVCFRSKDARC 143
+ ++ ++ +IR + LF ++ H P+ T + +LK C +D
Sbjct: 185 MSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDV 244
Query: 144 AEQVHAHIQKMGY-LNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITG 202
VH + G+ L D V N L+ +Y++GF +V A +VFDE R+ V+ W S++ G
Sbjct: 245 GRSVHGFSIRRGFDLADVFVCNSLIDMYSKGF-DVDSAFRVFDETTCRNIVS-WNSILAG 302
Query: 203 YAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEI--------SKIERWVY--- 251
+ + +E L++FH+MV++ + T+VS+L C E I R Y
Sbjct: 303 FVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESN 362
Query: 252 --FLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAM 309
LS LID TS S D TVL + + VV + M
Sbjct: 363 EVALSSLIDAYTSC--SLVDDAGTVL--------------------DSMTYKDVVSCSTM 400
Query: 310 ISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIG 369
IS G E +S+F M PN +T++S+L+AC+ DL KW H I
Sbjct: 401 ISGLAHAGRSDEAISIFCHM----RDTPNAITVISLLNACSVSADLRTSKWAH----GIA 452
Query: 370 HKGNIGSNQI-LATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDA 428
+ ++ N I + TS++D Y+KCG ++ A+ F+ K+++ + +I A+NG + A
Sbjct: 453 IRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKA 512
Query: 429 LRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFST-SLTLEHYACYIDL 487
L LF +M + G PNA T+L ALSAC+H G +++G IF+ M +L+HY+C +D+
Sbjct: 513 LALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDM 572
Query: 488 LARVGCIEEAIEVVTSMP--FKPNNFVWGALLGGCL-LHSRVELAQEVSKRLVEVDPTSS 544
L+R G I+ A+E++ ++P K WGA+L GC ++ + EV ++E++P S
Sbjct: 573 LSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCS 632
Query: 545 GGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVG 596
GY++ ++ A+++ W DV+ +R ++E+ ++ G S + + FL G
Sbjct: 633 SGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAG 684
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 164/370 (44%), Gaps = 50/370 (13%)
Query: 184 FDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEI 243
FD + R V+ W ++ G G EE L F + P T+V V+ AC SL
Sbjct: 84 FDCMNSRDSVS-WNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSL-- 140
Query: 244 SKIERWVYFLSELIDDSTSNGESCH-DSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRG 302
+F E I C SV ++ ++ ++ +R+ FD +S +R
Sbjct: 141 -------WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMS---ERD 189
Query: 303 VVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVH 362
V+ W+ +I +YVQ PV GL LF+ MV E T P+ VT+ SVL AC + D+ +G+ VH
Sbjct: 190 VISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVH 249
Query: 363 EYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVN 422
+ I +G ++ + SLIDMYSK +D A VF+ +++V +N+++ G N
Sbjct: 250 GFSI---RRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHN 306
Query: 423 GEGEDALRLFYKMPEFGLQPNAGTFLGALSACS-----------HSGFLERGRQ------ 465
++AL +F+ M + ++ + T + L C H + RG +
Sbjct: 307 QRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVAL 366
Query: 466 -IFRDMSFSTSL-----TLEHYACYIDL---------LARVGCIEEAIEVVTSMPFKPNN 510
D S SL T+ Y D+ LA G +EAI + M PN
Sbjct: 367 SSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNA 426
Query: 511 FVWGALLGGC 520
+LL C
Sbjct: 427 ITVISLLNAC 436
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 157/510 (30%), Positives = 260/510 (50%), Gaps = 46/510 (9%)
Query: 131 LLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAV------YARGFRNVVFARKVF 184
LL+ C D + +H + + ++D V++ L+A+ + + + +A +F
Sbjct: 18 LLQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIF 74
Query: 185 DEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEI- 243
+I + + + LI ++ + + M++ + P N T ++ A S +E
Sbjct: 75 SQIQN-PNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECV 133
Query: 244 -------SKIERW-----VYFLSELIDDSTSNG-----------ESCHDSVN-TVLVYLF 279
S+I R+ VY + L+ + G D V+ T +V +
Sbjct: 134 LVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGY 193
Query: 280 GKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNH 339
K G VE +RE FD + R + W+ MI+ Y ++ C + + LF M +EG N
Sbjct: 194 CKCGMVENAREMFDEMP---HRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV-ANE 249
Query: 340 VTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKE 399
MVSV+S+CA +G L G+ +EY++ K ++ N IL T+L+DM+ +CG +++A
Sbjct: 250 TVMVSVISSCAHLGALEFGERAYEYVV----KSHMTVNLILGTALVDMFWRCGDIEKAIH 305
Query: 400 VFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGF 459
VFE D + ++++I GLAV+G A+ F +M G P TF LSACSH G
Sbjct: 306 VFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGL 365
Query: 460 LERGRQIFRDMSFSTSLT--LEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALL 517
+E+G +I+ +M + LEHY C +D+L R G + EA + M KPN + GALL
Sbjct: 366 VEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALL 425
Query: 518 GGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKK 577
G C ++ E+A+ V L++V P SG YV+L+N A QW+ + +LR M+EK +KK
Sbjct: 426 GACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKK 485
Query: 578 QPGSSWISVDGVVHEFLVG-YLSHPQIEGI 606
PG S I +DG +++F +G HP++ I
Sbjct: 486 PPGWSLIEIDGKINKFTMGDDQKHPEMGKI 515
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 199/450 (44%), Gaps = 75/450 (16%)
Query: 9 TQKFKHCYLLPFRSSCSIVDHTPTTFTNLLQGHIPRSHLLQ---IHARIFQLGAHQDNL- 64
T +FKH L +S S D ++ G + R+HL+ + +R+ L
Sbjct: 8 TLRFKHPKLALLQSCSSFSD------LKIIHGFLLRTHLISDVFVASRLLALCVDDSTFN 61
Query: 65 LATRLIGHYPPRIALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPN 124
T L+G+ A +F + NPN+F FN +IR + S F + + + P+
Sbjct: 62 KPTNLLGY-----AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPD 116
Query: 125 DFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYAR------------ 172
+ TF FL+K + EQ H+ I + G+ ND V N LV +YA
Sbjct: 117 NITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFG 176
Query: 173 --GFRNVVF----------------ARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQ 214
GFR+VV AR++FDE+P R+ T W+ +I GYA++ E+ +
Sbjct: 177 QMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFT-WSIMINGYAKNNCFEKAID 235
Query: 215 LFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVN-- 272
LF M R+ + MVSV+S+C+ L + Y E + S H +VN
Sbjct: 236 LFEFMKREGVVANETVMVSVISSCAHLGALEFGERAY---EYVVKS-------HMTVNLI 285
Query: 273 --TVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMV 330
T LV +F + G++EK+ F+ + + W+++I G + + F M+
Sbjct: 286 LGTALVDMFWRCGDIEKAIHVFEGLPETDS---LSWSSIIKGLAVHGHAHKAMHYFSQMI 342
Query: 331 KEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILA--TSLIDMY 388
G P VT +VLSAC+ G + G ++E + K + G L ++DM
Sbjct: 343 SLGFI-PRDVTFTAVLSACSHGGLVEKGLEIYENM-----KKDHGIEPRLEHYGCIVDML 396
Query: 389 SKCGRLDRAKEVFEHAVSKDVVLFNAMIMG 418
+ G+L A E+ + K V NA I+G
Sbjct: 397 GRAGKLAEA----ENFILKMHVKPNAPILG 422
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/348 (19%), Positives = 143/348 (41%), Gaps = 59/348 (16%)
Query: 232 VSVLSACSSLEISKIERWVYFLSELIDD--------STSNGESCHDSVNTVLVYLFGKWG 283
+++L +CSS KI + LI D + +S + +L Y +G +
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 284 NVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMV 343
++ + +N +I + P + + M+K P+++T
Sbjct: 76 QIQNPN-------------LFVFNLLIRCFSTGAEPSKAFGFYTQMLKS-RIWPDNITFP 121
Query: 344 SVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYS-------------- 389
++ A +++ + +G+ H ++ G + ++ + SL+ MY+
Sbjct: 122 FLIKASSEMECVLVGEQTHSQIVRFGFQNDV----YVENSLVHMYANCGFIAAAGRIFGQ 177
Query: 390 -----------------KCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLF 432
KCG ++ A+E+F+ +++ ++ MI G A N E A+ LF
Sbjct: 178 MGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLF 237
Query: 433 YKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFS-TSLTLEHYACYIDLLARV 491
M G+ N + +S+C+H G LE G + + + S ++ L +D+ R
Sbjct: 238 EFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRC 297
Query: 492 GCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEV 539
G IE+AI V +P + ++ W +++ G +H A +++ +
Sbjct: 298 GDIEKAIHVFEGLP-ETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISL 344
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 124/334 (37%), Positives = 202/334 (60%), Gaps = 8/334 (2%)
Query: 279 FGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPN 338
+GK G ++++R + + R V W +IS Y + G E + +F+ M+ E P+
Sbjct: 192 YGKVGEMDEARSLLEMMPC-WVRNEVSWTCVISGYAKSGRASEAIEVFQRMLME-NVEPD 249
Query: 339 HVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAK 398
VT+++VLSACA +G L LG+ + Y + H+G + L ++IDMY+K G + +A
Sbjct: 250 EVTLLAVLSACADLGSLELGERICSY---VDHRG-MNRAVSLNNAVIDMYAKSGNITKAL 305
Query: 399 EVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSG 458
+VFE ++VV + +I GLA +G G +AL +F +M + G++PN TF+ LSACSH G
Sbjct: 306 DVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVG 365
Query: 459 FLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGAL 516
+++ G+++F M + +EHY C IDLL R G + EA EV+ SMPFK N +WG+L
Sbjct: 366 WVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSL 425
Query: 517 LGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIK 576
L +H +EL + L++++P +SG Y++LAN ++ +W++ +R M+ G+K
Sbjct: 426 LAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVK 485
Query: 577 KQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTL 610
K G S I V+ V++F+ G L+HPQ+E I+ L
Sbjct: 486 KMAGESSIEVENRVYKFISGDLTHPQVERIHEIL 519
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 135/476 (28%), Positives = 222/476 (46%), Gaps = 80/476 (16%)
Query: 47 LLQIHARIFQLGAHQDNLLATRLI------GHYPPRIALRVFHYLHNPNIFPFNAIIRVL 100
L Q H + G ++DNL + I GH R A VF + PN + N +IR L
Sbjct: 31 LKQSHCYMIITGLNRDNLNVAKFIEACSNAGHL--RYAYSVFTHQPCPNTYLHNTMIRAL 88
Query: 101 A---EQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYL 157
+ E S +++ L P+ FTF F+LK+ R D Q+H + G+
Sbjct: 89 SLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFD 148
Query: 158 NDPSVSNGLVAVY--ARGFRNVVFARKVFDE--IPD------------------------ 189
+ V GL+ +Y G + ARK+FDE + D
Sbjct: 149 SSVHVVTGLIQMYFSCGGLGD---ARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLL 205
Query: 190 -------RSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACS--- 239
R+EV+ WT +I+GYA+SG E +++F M+ +N+ P T+++VLSAC+
Sbjct: 206 EMMPCWVRNEVS-WTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLG 264
Query: 240 SLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG 299
SLE+ ER ++ G + S+N ++ ++ K GN+ K+ + F+ ++
Sbjct: 265 SLELG--ERICSYVDH-------RGMNRAVSLNNAVIDMYAKSGNITKALDVFECVN--- 312
Query: 300 KRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGK 359
+R VV W +I+ G E L++F MVK G RPN VT +++LSAC+ +G + LGK
Sbjct: 313 ERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAG-VRPNDVTFIAILSACSHVGWVDLGK 371
Query: 360 WVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSK-DVVLFNAMIMG 418
S+ K I N +ID+ + G+L A EV + K + ++ +++
Sbjct: 372 ---RLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAA 428
Query: 419 LAVNGE---GEDALRLFYKMPEFGLQP-NAGTFLGALSACSHSGFLERGRQIFRDM 470
V+ + GE AL K L+P N+G ++ + S+ G + R + R+M
Sbjct: 429 SNVHHDLELGERALSELIK-----LEPNNSGNYMLLANLYSNLGRWDESR-MMRNM 478
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 140/305 (45%), Gaps = 23/305 (7%)
Query: 89 NIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVH 148
N + +I A+ G S +F + + P++ T +L C E++
Sbjct: 214 NEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERIC 273
Query: 149 AHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGH 208
+++ G S++N ++ +YA+ N+ A VF+ + +R+ VT WT++I G A GH
Sbjct: 274 SYVDHRGMNRAVSLNNAVIDMYAKS-GNITKALDVFECVNERNVVT-WTTIIAGLATHGH 331
Query: 209 GEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCH 268
G E L +F+ MV+ +RP + T +++LSACS + WV L +S + H
Sbjct: 332 GAEALAMFNRMVKAGVRPNDVTFIAILSACSHVG------WVDLGKRLF-NSMRSKYGIH 384
Query: 269 DSVN--TVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAY-VQDGCPVEGLSL 325
++ ++ L G+ G + ++ E S K W ++++A V + +L
Sbjct: 385 PNIEHYGCMIDLLGRAGKLREADEVIK--SMPFKANAAIWGSLLAASNVHHDLELGERAL 442
Query: 326 FRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLI 385
++ E N++ + ++ S +LG+W ++ KG IG ++ S I
Sbjct: 443 SELIKLEPNNSGNYMLLANLYS--------NLGRWDESRMMRNMMKG-IGVKKMAGESSI 493
Query: 386 DMYSK 390
++ ++
Sbjct: 494 EVENR 498
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 159/484 (32%), Positives = 254/484 (52%), Gaps = 19/484 (3%)
Query: 146 QVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVF-ARKVFDEIPDRSEVTCWTSLITGYA 204
Q+H ++ K G P V+N L+ Y++ + F +R+ F++ P +S T +S+I+ +A
Sbjct: 36 QLHGYVVKSGLSLIPLVANNLINFYSKS--QLPFDSRRAFEDSPQKSSTTW-SSIISCFA 92
Query: 205 QSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNG 264
Q+ L+ M+ NLRP + + S +C+ L I R V+ LS G
Sbjct: 93 QNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLS------MKTG 146
Query: 265 ESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLS 324
V + LV ++ K G + +R+ FD + +R VV W+ M+ Y Q G E L
Sbjct: 147 YDADVFVGSSLVDMYAKCGEIVYARKMFDEMP---QRNVVTWSGMMYGYAQMGENEEALW 203
Query: 325 LFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSL 384
LF+ + E N + SV+S CA L LG+ +H + K + S+ + +SL
Sbjct: 204 LFKEALFENLA-VNDYSFSSVISVCANSTLLELGRQIH----GLSIKSSFDSSSFVGSSL 258
Query: 385 IDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNA 444
+ +YSKCG + A +VF K++ ++NAM+ A + + + LF +M G++PN
Sbjct: 259 VSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNF 318
Query: 445 GTFLGALSACSHSGFLERGRQIFRDMSFS-TSLTLEHYACYIDLLARVGCIEEAIEVVTS 503
TFL L+ACSH+G ++ GR F M S T +HYA +D+L R G ++EA+EV+T+
Sbjct: 319 ITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITN 378
Query: 504 MPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDV 563
MP P VWGALL C +H ELA + ++ E+ P SSG ++ L+NA A+D ++ D
Sbjct: 379 MPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDA 438
Query: 564 SALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMKAPSHC 623
+ R +R++G KK+ G SW+ VH F G H + + IY L L + M+ +
Sbjct: 439 AKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYI 498
Query: 624 QSVS 627
S
Sbjct: 499 ADTS 502
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 195/431 (45%), Gaps = 27/431 (6%)
Query: 48 LQIHARIFQLGAHQDNLLATRLIGHYP----PRIALRVFHYLHNPNIFPFNAIIRVLAEQ 103
LQ+H + + G L+A LI Y P + R F + +++II A+
Sbjct: 35 LQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQN 94
Query: 104 GHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVS 163
+ L P+D K C VH K GY D V
Sbjct: 95 ELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVG 154
Query: 164 NGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQN 223
+ LV +YA+ +V+ARK+FDE+P R+ VT W+ ++ GYAQ G EE L LF + +N
Sbjct: 155 SSLVDMYAK-CGEIVYARKMFDEMPQRNVVT-WSGMMYGYAQMGENEEALWLFKEALFEN 212
Query: 224 LRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWG 283
L + + SV+S C++ + ++ R ++ LS +S+ V + LV L+ K G
Sbjct: 213 LAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSS------FVGSSLVSLYSKCG 266
Query: 284 NVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMV 343
E + + F+ + + + WNAM+ AY Q + + LF+ M G +PN +T +
Sbjct: 267 VPEGAYQVFNEVPV---KNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSG-MKPNFITFL 322
Query: 344 SVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEH 403
+VL+AC+ G + G++ + + + I SL+DM + GRL A EV +
Sbjct: 323 NVLNACSHAGLVDEGRYYFDQM----KESRIEPTDKHYASLVDMLGRAGRLQEALEVITN 378
Query: 404 -AVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQP-NAGTFLGALSACSHSGFLE 461
+ ++ A++ V+ E L F F L P ++G + +A + G E
Sbjct: 379 MPIDPTESVWGALLTSCTVHKNTE--LAAFAADKVFELGPVSSGMHISLSNAYAADGRFE 436
Query: 462 ---RGRQIFRD 469
+ R++ RD
Sbjct: 437 DAAKARKLLRD 447
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/360 (20%), Positives = 161/360 (44%), Gaps = 21/360 (5%)
Query: 50 IHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQGH 105
+H + G D + + L+ Y A ++F + N+ ++ ++ A+ G
Sbjct: 138 VHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGE 197
Query: 106 VSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNG 165
LF + LA ND++FS ++ VC S Q+H K + + V +
Sbjct: 198 NEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSS 257
Query: 166 LVAVYAR-GFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNL 224
LV++Y++ G + +VF+E+P ++ + W +++ YAQ H ++V++LF M +
Sbjct: 258 LVSLYSKCGVPEGAY--QVFNEVPVKN-LGIWNAMLKAYAQHSHTQKVIELFKRMKLSGM 314
Query: 225 RPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGN 284
+P T ++VL+ACS + ++ Y+ ++ + + + S LV + G+ G
Sbjct: 315 KPNFITFLNVLNACSHAGL--VDEGRYYFDQMKESRIEPTDKHYAS----LVDMLGRAGR 368
Query: 285 VEKSRERFDRISAAGKRGVVPWNAMI-SAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMV 343
++++ E + V W A++ S V + + ++ + H+++
Sbjct: 369 LQEALEVITNMPIDPTESV--WGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLS 426
Query: 344 SVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRL-DRAKEVFE 402
+ +A + D + + + L G K G + + + + ++ R +++KE++E
Sbjct: 427 NAYAADGRFEDAAKAR---KLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYE 483
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 235 bits (600), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 159/492 (32%), Positives = 249/492 (50%), Gaps = 36/492 (7%)
Query: 135 CFRSKDARCA------------EQVHAHIQKMGYLNDPSVSNGLVAVYARGF-RNVVFAR 181
CF+S+ +C Q+H I ND + + LV V + +++ FAR
Sbjct: 8 CFKSRKHQCLIFLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFAR 67
Query: 182 KVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSL 241
+ D + T W L GY+ S E + ++ M R+ ++P T +L AC+S
Sbjct: 68 TLLLHSSDSTPST-WNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASF 126
Query: 242 EISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKR 301
R + + +G V L++L+G +R+ FD ++ +R
Sbjct: 127 LGLTAGRQIQV------EVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMT---ER 177
Query: 302 GVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWV 361
VV WN++++A V++G F M+ + P+ TMV +LSAC G+LSLGK V
Sbjct: 178 NVVSWNSIMTALVENGKLNLVFECFCEMIGKRFC-PDETTMVVLLSACG--GNLSLGKLV 234
Query: 362 HEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAV 421
H ++ + N L T+L+DMY+K G L+ A+ VFE V K+V ++AMI+GLA
Sbjct: 235 HSQVMV----RELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQ 290
Query: 422 NGEGEDALRLFYKM-PEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMS--FSTSLTL 478
G E+AL+LF KM E ++PN TFLG L ACSH+G ++ G + F +M +
Sbjct: 291 YGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMM 350
Query: 479 EHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVE---LAQEVSKR 535
HY +D+L R G + EA + + MPF+P+ VW LL C +H + + ++V KR
Sbjct: 351 IHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKR 410
Query: 536 LVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLV 595
L+E++P SG V++AN A R W + + +R M+E +KK G S + + G H F
Sbjct: 411 LIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFS 470
Query: 596 GYLSHPQIEGIY 607
GY + IY
Sbjct: 471 GYDPRSEYVSIY 482
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 184/391 (47%), Gaps = 27/391 (6%)
Query: 46 HLLQIHARIFQLGAHQDNLLATRLIG----HYPPRIALRVFHYLHNPNIFP--FNAIIRV 99
HLLQIH +I D+ + + L+ +A LH+ + P +N + R
Sbjct: 28 HLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRG 87
Query: 100 LAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLND 159
+ +++++K R + PN TF FLLK C Q+ + K G+ D
Sbjct: 88 YSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFD 147
Query: 160 PSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMM 219
V N L+ +Y + ARKVFDE+ +R+ V W S++T ++G V + F M
Sbjct: 148 VYVGNNLIHLYGTC-KKTSDARKVFDEMTERN-VVSWNSIMTALVENGKLNLVFECFCEM 205
Query: 220 VRQNLRPQNDTMVSVLSAC-SSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYL 278
+ + P TMV +LSAC +L + K+ + EL + + T LV +
Sbjct: 206 IGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVREL---------ELNCRLGTALVDM 256
Query: 279 FGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPN 338
+ K G +E +R F+R+ + V W+AMI Q G E L LF M+KE + RPN
Sbjct: 257 YAKSGGLEYARLVFERMV---DKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPN 313
Query: 339 HVTMVSVLSACAQIGDLSLG-KWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRA 397
+VT + VL AC+ G + G K+ HE + HK I I +++D+ + GRL+ A
Sbjct: 314 YVTFLGVLCACSHTGLVDDGYKYFHE--MEKIHK--IKPMMIHYGAMVDILGRAGRLNEA 369
Query: 398 KEVFEHA-VSKDVVLFNAMIMGLAVNGEGED 427
+ + D V++ ++ +++ + +D
Sbjct: 370 YDFIKKMPFEPDAVVWRTLLSACSIHHDEDD 400
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/426 (33%), Positives = 221/426 (51%), Gaps = 17/426 (3%)
Query: 162 VSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVR 221
+SN R +F ++ D+ P W +++ Y + + +Q++ MVR
Sbjct: 54 LSNCTSLARVRRIHGDIFRSRILDQYPI---AFLWNNIMRSYIRHESPLDAIQVYLGMVR 110
Query: 222 QNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGK 281
+ P ++ V+ A + + + EL + G + + + L+ K
Sbjct: 111 STVLPDRYSLPIVIKAAVQIHDFTLGK------ELHSVAVRLGFVGDEFCESGFITLYCK 164
Query: 282 WGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVT 341
G E +R+ FD +R + WNA+I G E + +F M + G P+ T
Sbjct: 165 AGEFENARKVFDE---NPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGL-EPDDFT 220
Query: 342 MVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVF 401
MVSV ++C +GDLSL +H+ ++ K S+ ++ SLIDMY KCGR+D A +F
Sbjct: 221 MVSVTASCGGLGDLSLAFQLHKCVLQA--KTEEKSDIMMLNSLIDMYGKCGRMDLASHIF 278
Query: 402 EHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLE 461
E ++VV +++MI+G A NG +AL F +M EFG++PN TF+G LSAC H G +E
Sbjct: 279 EEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVE 338
Query: 462 RGRQIFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGG 519
G+ F M F L HY C +DLL+R G ++EA +VV MP KPN VWG L+GG
Sbjct: 339 EGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGG 398
Query: 520 CLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQP 579
C VE+A+ V+ +VE++P + G YV+LAN A W DV +R M+ K + K P
Sbjct: 399 CEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIP 458
Query: 580 GSSWIS 585
S+ S
Sbjct: 459 AYSYAS 464
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 184/403 (45%), Gaps = 45/403 (11%)
Query: 22 SSCSIVDHTPTT----FTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPPRI 77
SS S+ +P LL + + +IH IF+ +R++ YP I
Sbjct: 34 SSSSVTPLSPQDRNKLLATLLSNCTSLARVRRIHGDIFR----------SRILDQYP--I 81
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
A F +N I+R ++ + + P+ ++ ++K +
Sbjct: 82 A------------FLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQ 129
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARG--FRNVVFARKVFDEIPDRSEVTC 195
D +++H+ ++G++ D +G + +Y + F N ARKVFDE P+R ++
Sbjct: 130 IHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFEN---ARKVFDENPER-KLGS 185
Query: 196 WTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSE 255
W ++I G +G E +++F M R L P + TMVSV ++C L + + L +
Sbjct: 186 WNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSL---AFQLHK 242
Query: 256 LIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQ 315
+ + + +S +N+ L+ ++GK G ++ + F+ + +R VV W++MI Y
Sbjct: 243 CVLQAKTEEKSDIMMLNS-LIDMYGKCGRMDLASHIFEEMR---QRNVVSWSSMIVGYAA 298
Query: 316 DGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIG 375
+G +E L FR M +E RPN +T V VLSAC G + GK Y + + +
Sbjct: 299 NGNTLEALECFRQM-REFGVRPNKITFVGVLSACVHGGLVEEGK---TYFAMMKSEFELE 354
Query: 376 SNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMG 418
++D+ S+ G+L AK+V E K V+ +MG
Sbjct: 355 PGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMG 397
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 162/531 (30%), Positives = 269/531 (50%), Gaps = 46/531 (8%)
Query: 90 IFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHA 149
IF F +I + H S F L ++ L+P + + L+ S + +++HA
Sbjct: 3 IFRFTSISPRILPSNHYS-TFPLKQNVSS--LSPAKY-IAGALQEHINSPAPKAGKKIHA 58
Query: 150 HIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHG 209
I K G+ D ++S L+ ++ + + +AR+VFDE+P + ++ + +I+GY + G
Sbjct: 59 DIIKTGFQPDLNISIKLLILHLK-CGCLSYARQVFDELP-KPTLSAYNYMISGYLKHGLV 116
Query: 210 EEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIE-----RWVY------------- 251
+E+L L M + T+ VL A +S + I R V+
Sbjct: 117 KELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDV 176
Query: 252 FLSELIDDSTSNG---------ESCHDS---VNTVLVYLFGKWGNVEKSRERFDRISAAG 299
++ L+D +G E+ D T ++ + G VE + E F+
Sbjct: 177 LITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKV-- 234
Query: 300 KRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGK 359
+ +V +NAM+ + + G + I ++ PN T SV+ AC+ + +G+
Sbjct: 235 -KDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQ 293
Query: 360 WVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGL 419
VH ++ G +I + +SL+DMY+KCG ++ A+ VF+ K+V + +MI G
Sbjct: 294 QVHAQIMKSGVYTHIK----MGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGY 349
Query: 420 AVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFSTSLT 477
NG E+AL LF +M EF ++PN TFLGALSACSHSG +++G +IF M +S
Sbjct: 350 GKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPK 409
Query: 478 LEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLV 537
+EHYAC +DL+ R G + +A E +MP +P++ +W ALL C LH VELA + L
Sbjct: 410 MEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELF 469
Query: 538 EVDPTSS-GGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVD 587
+++ G Y+ L+N AS+ +W++VS +R M+ + I K G SW S D
Sbjct: 470 KLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWTSED 520
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 148/466 (31%), Positives = 244/466 (52%), Gaps = 16/466 (3%)
Query: 145 EQVHAHIQKMGYLNDPSVSNGLVAVYA-RGFRNVVFARKVFDEIPDRSEVTCWTSLITGY 203
+Q+ +H G+ + + L+ A F ++ FA ++F IP + W ++I G+
Sbjct: 20 KQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIP-KPLTNDWNAIIRGF 78
Query: 204 AQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSN 263
A S H + M++Q+ V L+ +L+ + +L
Sbjct: 79 AGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQINRR 138
Query: 264 GESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGL 323
G S + T L+ + K G++ + + FD + R V WNA+I+ V E +
Sbjct: 139 GLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPV---RDVASWNALIAGLVSGNRASEAM 195
Query: 324 SLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATS 383
L++ M EG R + VT+V+ L AC+ +GD+ G+ +I H G N I++ +
Sbjct: 196 ELYKRMETEGIRR-SEVTVVAALGACSHLGDVKEGE-------NIFH-GYSNDNVIVSNA 246
Query: 384 LIDMYSKCGRLDRAKEVFEHAV-SKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQP 442
IDMYSKCG +D+A +VFE K VV +N MI G AV+GE AL +F K+ + G++P
Sbjct: 247 AIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKP 306
Query: 443 NAGTFLGALSACSHSGFLERGRQIFRDMSFS-TSLTLEHYACYIDLLARVGCIEEAIEVV 501
+ ++L AL+AC H+G +E G +F +M+ ++HY C +DLL+R G + EA +++
Sbjct: 307 DDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDII 366
Query: 502 TSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWN 561
SM P+ +W +LLG ++S VE+A+ S+ + E+ + G +V+L+N A+ +W
Sbjct: 367 CSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWK 426
Query: 562 DVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIY 607
DV +R +M K +KK PG S+I G +HEF SH Q IY
Sbjct: 427 DVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIY 472
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 192/426 (45%), Gaps = 33/426 (7%)
Query: 36 NLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGH--YPP----RIALRVFHYLHNPN 89
++Q + S + Q+ + G Q + L +RL+ P A+++F Y+ P
Sbjct: 8 TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPL 67
Query: 90 IFPFNAIIRVLAEQGHVSHVFSLFNDL------KHRVLAPNDFTFSFLLKVCFRSKDARC 143
+NAIIR A H S FS + + + + T SF LK C R+ +
Sbjct: 68 TNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127
Query: 144 AEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGY 203
+Q+H I + G D + L+ Y++ +++ A K+FDE+P R +V W +LI G
Sbjct: 128 MDQLHCQINRRGLSADSLLCTTLLDAYSKN-GDLISAYKLFDEMPVR-DVASWNALIAGL 185
Query: 204 AQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSN 263
E ++L+ M + +R T+V+ L ACS L K E I SN
Sbjct: 186 VSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVK-------EGENIFHGYSN 238
Query: 264 GESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGL 323
V+ + ++ K G V+K+ + F++ + GK+ VV WN MI+ + G L
Sbjct: 239 DNVI---VSNAAIDMYSKCGFVDKAYQVFEQFT--GKKSVVTWNTMITGFAVHGEAHRAL 293
Query: 324 SLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATS 383
+F + G +P+ V+ ++ L+AC G + G V + G + N
Sbjct: 294 EIFDKLEDNG-IKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKG----VERNMKHYGC 348
Query: 384 LIDMYSKCGRLDRAKEVF-EHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQP 442
++D+ S+ GRL A ++ ++ D VL+ +++ + + E A ++ E G+
Sbjct: 349 VVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVN- 407
Query: 443 NAGTFL 448
N G F+
Sbjct: 408 NDGDFV 413
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 155/462 (33%), Positives = 245/462 (53%), Gaps = 37/462 (8%)
Query: 147 VHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQS 206
+H+ K G +D V + L+++Y + VV ARKVFDE+P+R+ V W ++I GY +
Sbjct: 68 LHSESIKFGVCSDVMVGSSLISMYGK-CGCVVSARKVFDEMPERN-VATWNAMIGGYMSN 125
Query: 207 GHGEEVLQLFHM------------MVRQNLRPQNDTMVSVLSACSSLEISKIERW----- 249
G LF M++ + L E+ ++ W
Sbjct: 126 GDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLG 185
Query: 250 VYFLSELIDDSTSNGESCHDS---VNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPW 306
VY + ++D+ E + V ++++ + + G+V ++R F R+ A R +V W
Sbjct: 186 VYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFA---RDLVIW 242
Query: 307 NAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLI 366
N +I+ Y Q+G + + F M EG P+ VT+ S+LSACAQ G L +G+ VH
Sbjct: 243 NTLIAGYAQNGYSDDAIDAFFNMQGEGY-EPDAVTVSSILSACAQSGRLDVGREVHSL-- 299
Query: 367 SIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGE 426
I H+G I NQ ++ +LIDMY+KCG L+ A VFE + V N+MI LA++G+G+
Sbjct: 300 -INHRG-IELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGK 357
Query: 427 DALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM-SFSTSLTLEHYACYI 485
+AL +F M L+P+ TF+ L+AC H GFL G +IF +M + ++H+ C I
Sbjct: 358 EALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLI 417
Query: 486 DLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSG 545
LL R G ++EA +V M KPN+ V GALLG C +H E+A++V K ++E + +
Sbjct: 418 HLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMK-IIETAGSITN 476
Query: 546 GY-----VMLANALASDRQWNDVSALRLEMREKGIKKQPGSS 582
Y ++N A +W ALR+EM ++G++K PG S
Sbjct: 477 SYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 111/233 (47%), Gaps = 12/233 (5%)
Query: 309 MISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACA-QIGDLSLGKWVHEYLIS 367
+I ++ G P++ L L+ + + G P V + +L ACA + + LGK +H I
Sbjct: 17 LIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPL--ILRACACVVPRVVLGKLLHSESIK 74
Query: 368 IGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGED 427
G + S+ ++ +SLI MY KCG + A++VF+ ++V +NAMI G NG+
Sbjct: 75 FG----VCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVL 130
Query: 428 ALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEHYACYIDL 487
A LF E + N T++ + +E+ R++F M F ++ ++ + +
Sbjct: 131 ASGLF---EEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELK-NVKAWSVMLGV 186
Query: 488 LARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVD 540
+E+A + +P K N FVW ++ G V A+ + R+ D
Sbjct: 187 YVNNRKMEDARKFFEDIPEK-NAFVWSLMMSGYFRIGDVHEARAIFYRVFARD 238
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 2/161 (1%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
A +F+ + ++ +N +I A+ G+ F +++ P+ T S +L C +
Sbjct: 227 ARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQ 286
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWT 197
S +VH+ I G + VSN L+ +YA+ ++ A VF+ I RS V C
Sbjct: 287 SGRLDVGREVHSLINHRGIELNQFVSNALIDMYAK-CGDLENATSVFESISVRS-VACCN 344
Query: 198 SLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSAC 238
S+I+ A G G+E L++F M +L+P T ++VL+AC
Sbjct: 345 SMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTAC 385
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 232 bits (591), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 122/334 (36%), Positives = 191/334 (57%), Gaps = 16/334 (4%)
Query: 271 VNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMV 330
+ T LV + G+V+ +R+ FD K+ +V W AMISAY ++ VE + LF+ M
Sbjct: 102 IQTSLVGFYSSVGDVDYARQVFD--ETPEKQNIVLWTAMISAYTENENSVEAIELFKRME 159
Query: 331 KEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSK 390
E + V + LSACA +G + +G+ + Y SI K + + L SL++MY K
Sbjct: 160 AE-KIELDGVIVTVALSACADLGAVQMGEEI--YSRSIKRKRRLAMDLTLRNSLLNMYVK 216
Query: 391 CGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFG------LQPNA 444
G ++A+++F+ ++ KDV + +MI G A+NG+ +++L LF KM + PN
Sbjct: 217 SGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPND 276
Query: 445 GTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLE--HYACYIDLLARVGCIEEAIEVVT 502
TF+G L ACSHSG +E G++ F+ M +L H+ C +DL R G +++A E +
Sbjct: 277 VTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFIN 336
Query: 503 SMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWND 562
MP KPN +W LLG C LH VEL +EV +R+ E+D G YV L+N AS W++
Sbjct: 337 QMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDE 396
Query: 563 VSALRLEMREKGIKKQPGSSWISVDGVVHEFLVG 596
S +R +R+ ++ PG SWI + +++EF+ G
Sbjct: 397 KSKMRDRVRK---RRMPGKSWIELGSIINEFVSG 427
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 157/335 (46%), Gaps = 25/335 (7%)
Query: 115 DLKHRVLAPNDFTFSFLLKVCFRSKDARCA-----EQVHAHIQKMGYLNDPSVSNGLVAV 169
D +HR F SF + + A+ A Q+HA ++K+G+ + LV
Sbjct: 50 DFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGF 109
Query: 170 YARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQND 229
Y+ +V +AR+VFDE P++ + WT++I+ Y ++ + E ++LF M + +
Sbjct: 110 YS-SVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGV 168
Query: 230 TMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSR 289
+ LSAC+ L ++ +Y S + + +S L+ ++ K G EK+R
Sbjct: 169 IVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNS----LLNMYVKSGETEKAR 224
Query: 290 ERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIM-----VKEGTTRPNHVTMVS 344
+ FD + ++ V + +MI Y +G E L LF+ M ++ PN VT +
Sbjct: 225 KLFDE---SMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIG 281
Query: 345 VLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKE-VFEH 403
VL AC+ G + GK + S+ N+ + ++D++ + G L A E + +
Sbjct: 282 VLMACSHSGLVEEGK---RHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQM 338
Query: 404 AVSKDVVLFNAMIMGLAVNGE---GEDALRLFYKM 435
+ + V++ ++ +++G GE+ R +++
Sbjct: 339 PIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFEL 373
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 131/308 (42%), Gaps = 24/308 (7%)
Query: 20 FRSSCSIVDHTPTTFTNLLQGHIPRSHL--LQIHARIFQLGAHQDNLLATRLIGHYPP-- 75
FR S S VD F + S L QIHA + +LG + + T L+G Y
Sbjct: 55 FRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVG 114
Query: 76 --RIALRVFHYL-HNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLL 132
A +VF NI + A+I E + LF ++ + + + L
Sbjct: 115 DVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVAL 174
Query: 133 KVCFRSKDARCAEQVHAH--IQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDR 190
C + E++++ +K D ++ N L+ +Y + ARK+FDE R
Sbjct: 175 SACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEK-ARKLFDE-SMR 232
Query: 191 SEVTCWTSLITGYAQSGHGEEVLQLFHMM--VRQN----LRPQNDTMVSVLSACSSLEIS 244
+VT +TS+I GYA +G +E L+LF M + Q+ + P + T + VL ACS +
Sbjct: 233 KDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGL- 291
Query: 245 KIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVV 304
+E +I D H +V LF + G+++ + E +++ K V
Sbjct: 292 -VEEGKRHFKSMIMDYNLKPREAHFG---CMVDLFCRSGHLKDAHEFINQMPI--KPNTV 345
Query: 305 PWNAMISA 312
W ++ A
Sbjct: 346 IWRTLLGA 353
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/324 (37%), Positives = 183/324 (56%), Gaps = 9/324 (2%)
Query: 298 AGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSL 357
A + V+ WN MI YV++ E L + M+ +PN + S L+ACA++GDL
Sbjct: 124 ASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHH 183
Query: 358 GKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIM 417
KWVH +I G I N IL+++L+D+Y+KCG + ++EVF DV ++NAMI
Sbjct: 184 AKWVHSLMIDSG----IELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMIT 239
Query: 418 GLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMS--FSTS 475
G A +G +A+R+F +M + P++ TFLG L+ CSH G LE G++ F MS FS
Sbjct: 240 GFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQ 299
Query: 476 LTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKR 535
LEHY +DLL R G ++EA E++ SMP +P+ +W +LL + EL + +
Sbjct: 300 PKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQN 359
Query: 536 LVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLV 595
L SG YV+L+N +S ++W +R M ++GI+K G SW+ G++H F
Sbjct: 360 L---SKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKA 416
Query: 596 GYLSHPQIEGIYLTLTGLAKHMKA 619
G SH + + IY L GL + K+
Sbjct: 417 GDTSHIETKAIYKVLEGLIQKTKS 440
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 153/343 (44%), Gaps = 59/343 (17%)
Query: 131 LLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVV------------ 178
+L+ C +++C Q HA I K+GY PS+ VA Y R R+ +
Sbjct: 36 VLESCKAPSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLS 95
Query: 179 --------------------FARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQ-LFH 217
A+KV D++ +T W +I GY ++ EE L+ L +
Sbjct: 96 PGVCNINLIIESLMKIGESGLAKKVLRNASDQNVIT-WNLMIGGYVRNVQYEEALKALKN 154
Query: 218 MMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVY 277
M+ +++P + S L+AC+ L +WV+ L +ID +G + +++ LV
Sbjct: 155 MLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSL--MID----SGIELNAILSSALVD 208
Query: 278 LFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRP 337
++ K G++ SRE F + + V WNAMI+ + G E + +F M E + P
Sbjct: 209 VYAKCGDIGTSREVFYSVK---RNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVS-P 264
Query: 338 NHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRA 397
+ +T + +L+ C+ G L GK EY + + +I +++D+ + GR+ A
Sbjct: 265 DSITFLGLLTTCSHCGLLEEGK---EYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEA 321
Query: 398 KEVFEHA-VSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFG 439
E+ E + DVV++ +++ YK PE G
Sbjct: 322 YELIESMPIEPDVVIWRSLLSSSRT-----------YKNPELG 353
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 93/183 (50%), Gaps = 13/183 (7%)
Query: 63 NLLATRLIGHYPPRIALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHV------FSLFNDL 116
NL+ L+ +A +V + N+ +N +I G+V +V +L N L
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMI-----GGYVRNVQYEEALKALKNML 156
Query: 117 KHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRN 176
+ PN F+F+ L C R D A+ VH+ + G + +S+ LV VYA+ +
Sbjct: 157 SFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAK-CGD 215
Query: 177 VVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLS 236
+ +R+VF + R++V+ W ++ITG+A G E +++F M +++ P + T + +L+
Sbjct: 216 IGTSREVFYSVK-RNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLT 274
Query: 237 ACS 239
CS
Sbjct: 275 TCS 277
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 161/575 (28%), Positives = 267/575 (46%), Gaps = 30/575 (5%)
Query: 50 IHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQGH 105
+H + G Q L LI Y A+ +F + +N++I G
Sbjct: 170 LHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGA 229
Query: 106 VSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQ---VHAHIQKMGYLNDPSV 162
+L + L + +LK C + + E+ +H + K+G D V
Sbjct: 230 AEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVV 289
Query: 163 SNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGH-----GEEVLQLFH 217
L+ +YA+ ++ A K+F +P ++ VT + ++I+G+ Q E +LF
Sbjct: 290 RTALLDMYAKN-GSLKEAIKLFSLMPSKNVVT-YNAMISGFLQMDEITDEASSEAFKLFM 347
Query: 218 MMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVY 277
M R+ L P T VL ACS+ + + R ++ L N + + + L+
Sbjct: 348 DMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALI------CKNNFQSDEFIGSALIE 401
Query: 278 LFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRP 337
L+ G+ E + F ++ K+ + W +MI +VQ+ LFR + RP
Sbjct: 402 LYALMGSTEDGMQCF---ASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFS-SHIRP 457
Query: 338 NHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRA 397
T+ ++SACA LS G+ + Y I K I + + TS I MY+K G + A
Sbjct: 458 EEYTVSLMMSACADFAALSSGEQIQGYAI----KSGIDAFTSVKTSSISMYAKSGNMPLA 513
Query: 398 KEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHS 457
+VF + DV ++AMI LA +G +AL +F M G++PN FLG L AC H
Sbjct: 514 NQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHG 573
Query: 458 GFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGA 515
G + +G + F+ M + + +H+ C +DLL R G + +A ++ S F+ + W A
Sbjct: 574 GLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRA 633
Query: 516 LLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGI 575
LL C ++ + + V++RL+E++P +SG YV+L N + +R MR++G+
Sbjct: 634 LLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGV 693
Query: 576 KKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTL 610
KK+P SWI + H F V LSHP + IY L
Sbjct: 694 KKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTML 728
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 201/426 (47%), Gaps = 42/426 (9%)
Query: 128 FSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEI 187
+ L + +S + H H+ K + N L+ +Y + R + FAR++FD +
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKC-RELGFARQLFDRM 108
Query: 188 PDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIE 247
P+R+ + + SLI+GY Q G E+ ++LF NL+ T L C E
Sbjct: 109 PERN-IISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCG-------E 160
Query: 248 RWVYFLSELIDD-STSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPW 306
R L EL+ NG S + VL+ ++ K G ++++ FDR +R V W
Sbjct: 161 RCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD---ERDQVSW 217
Query: 307 NAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACA---QIGDLSLGKWVHE 363
N++IS YV+ G E L+L M ++G + + SVL AC G + G +H
Sbjct: 218 NSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYA-LGSVLKACCINLNEGFIEKGMAIHC 276
Query: 364 YLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNG 423
Y +G + +I ++ T+L+DMY+K G L A ++F SK+VV +NAMI G
Sbjct: 277 YTAKLGMEFDI----VVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMD 332
Query: 424 EGED-----ALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQI--------FRDM 470
E D A +LF M GL+P+ TF L ACS + LE GRQI F+
Sbjct: 333 EITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSD 392
Query: 471 SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQ 530
F S +E YA +G E+ ++ S K + W +++ + + ++E A
Sbjct: 393 EFIGSALIELYAL-------MGSTEDGMQCFASTS-KQDIASWTSMIDCHVQNEQLESAF 444
Query: 531 EVSKRL 536
++ ++L
Sbjct: 445 DLFRQL 450
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 180/398 (45%), Gaps = 26/398 (6%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
A ++F + NI FN++I + G LF + + L + FT++ L C
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGE 160
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWT 197
D E +H + G + N L+ +Y++ + + A +FD +R +V+ W
Sbjct: 161 RCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGK-LDQAMSLFDRCDERDQVS-WN 218
Query: 198 SLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACS-SLEISKIERWVY---FL 253
SLI+GY + G EE L L M R L + SVL AC +L IE+ + +
Sbjct: 219 SLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYT 278
Query: 254 SELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAY 313
++L G V T L+ ++ K G+++++ + F + + + VV +NAMIS +
Sbjct: 279 AKL-------GMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPS---KNVVTYNAMISGF 328
Query: 314 VQ-----DGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISI 368
+Q D E LF M + G P+ T VL AC+ L G+ +H +
Sbjct: 329 LQMDEITDEASSEAFKLFMDMQRRG-LEPSPSTFSVVLKACSAAKTLEYGRQIHALIC-- 385
Query: 369 GHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDA 428
K N S++ + ++LI++Y+ G + + F +D+ + +MI N + E A
Sbjct: 386 --KNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESA 443
Query: 429 LRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQI 466
LF ++ ++P T +SAC+ L G QI
Sbjct: 444 FDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQI 481
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 164/562 (29%), Positives = 268/562 (47%), Gaps = 74/562 (13%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
AL++F + + + +I+ A+ S LF ++++ + N+ T + ++ C
Sbjct: 126 ALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSH 185
Query: 138 SK---DARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVT 194
D R + + ++ G + VS L+ +Y + ARK+FDE+P+R+ VT
Sbjct: 186 LGGIWDCRMLQSLAIKLKLEGRV---FVSTNLLHMYCLCL-CLKDARKLFDEMPERNLVT 241
Query: 195 ------------------------------CWTSLITGYAQSGHGEEVLQLFHMMVRQNL 224
W ++I G + +E L + M+R +
Sbjct: 242 WNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGM 301
Query: 225 RPQNDTMVSVLSACS-SLEISK--------IERW-------------VYFLSELIDDSTS 262
+P MV +LSA + S+ SK ++R Y +S I +
Sbjct: 302 KPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQ 361
Query: 263 NGESC---HDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCP 319
E+ H + L+ F K G VE++RE FD+ + + WNAMIS Y Q P
Sbjct: 362 QFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTH---DKDIFSWNAMISGYAQSLSP 418
Query: 320 VEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQI 379
L LFR M+ +P+ +TMVSV SA + +G L GK H+YL + I N
Sbjct: 419 QLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL----NFSTIPPNDN 474
Query: 380 LATSLIDMYSKCGRLDRAKEVF---EHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMP 436
L ++IDMY+KCG ++ A +F ++ S + +NA+I G A +G + AL L+ +
Sbjct: 475 LTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQ 534
Query: 437 EFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSL--TLEHYACYIDLLARVGCI 494
++PN+ TF+G LSAC H+G +E G+ F M + ++HY C +DLL + G +
Sbjct: 535 SLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRL 594
Query: 495 EEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANAL 554
EEA E++ MP K + +WG LL H VE+A+ + L +DP+ G VML+N
Sbjct: 595 EEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVY 654
Query: 555 ASDRQWNDVSALRLEMREKGIK 576
A +W DV+ +R EMR + ++
Sbjct: 655 ADAGRWEDVALVREEMRTRDVE 676
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 133/504 (26%), Positives = 224/504 (44%), Gaps = 101/504 (20%)
Query: 132 LKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYAR------------------- 172
L C S D C Q+H + K G ++ + N ++ +YA+
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 107
Query: 173 --------GF---RNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVR 221
G+ R + A K+FD +P+RS V+ +T+LI GYAQ+ E ++LF M
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMPERSCVS-YTTLIKGYAQNNQWSEAMELFREMRN 166
Query: 222 QNLRPQNDTMVSVLSACS------------SLEIS-KIERWVYFLSELI----------D 258
+ T+ +V+SACS SL I K+E V+ + L+ D
Sbjct: 167 LGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKD 226
Query: 259 DSTSNGESCHDSVNT--VLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQD 316
E ++ T V++ + K G +E++ E FD+I+ ++ +V W MI ++
Sbjct: 227 ARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQIT---EKDIVSWGTMIDGCLRK 283
Query: 317 GCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIG------- 369
E L + M++ G +P+ V MV +LSA A+ S G +H ++ G
Sbjct: 284 NQLDEALVYYTEMLRCG-MKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFL 342
Query: 370 -----HKGNIGSNQILA---------------TSLIDMYSKCGRLDRAKEVFEHAVSKDV 409
H + ++ LA +LI + K G +++A+EVF+ KD+
Sbjct: 343 QATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDI 402
Query: 410 VLFNAMIMGLAVNGEGEDALRLFYKM-PEFGLQPNAGTFLGALSACSHSGFLERGRQIFR 468
+NAMI G A + + AL LF +M ++P+A T + SA S G LE G++
Sbjct: 403 FSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHD 462
Query: 469 DMSFSTSLTLEHY-ACYIDLLARVGCIEEAIEV------VTSMPFKPNNFVWGALLGGCL 521
++FST ++ A ID+ A+ G IE A+ + ++S P W A++ G
Sbjct: 463 YLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISP----WNAIICGSA 518
Query: 522 LHSRVELAQEVSKRL--VEVDPTS 543
H +LA ++ L + + P S
Sbjct: 519 THGHAKLALDLYSDLQSLPIKPNS 542
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 102/251 (40%), Gaps = 43/251 (17%)
Query: 333 GTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCG 392
G + +VS L +CA D++ G+ +H ++ K + SN + S+++MY+KC
Sbjct: 35 GESSDTERALVSALGSCASSNDVTCGRQIHCRVL----KSGLDSNGYICNSVLNMYAKCR 90
Query: 393 RLDRAKEVFEHAVSKDVVLFNAM-------------------------------IMGLAV 421
L A+ VF D FN M I G A
Sbjct: 91 LLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQ 150
Query: 422 NGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEHY 481
N + +A+ LF +M G+ N T +SACSH G + R + S + L LE
Sbjct: 151 NNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRML---QSLAIKLKLEGR 207
Query: 482 ----ACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLV 537
+ + C+++A ++ MP + N W +L G +E A+E+ ++
Sbjct: 208 VFVSTNLLHMYCLCLCLKDARKLFDEMP-ERNLVTWNVMLNGYSKAGLIEQAEELFDQIT 266
Query: 538 EVDPTSSGGYV 548
E D S G +
Sbjct: 267 EKDIVSWGTMI 277
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 152/551 (27%), Positives = 263/551 (47%), Gaps = 21/551 (3%)
Query: 81 VFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKD 140
VF + ++ +N+++ G L + + N TF+ L CF
Sbjct: 318 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 377
Query: 141 ARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLI 200
+H + G + + N LV++Y + + +R+V ++P R +V W +LI
Sbjct: 378 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGK-IGEMSESRRVLLQMP-RRDVVAWNALI 435
Query: 201 TGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDS 260
GYA+ ++ L F M + + T+VSVLSAC L +ER + ++
Sbjct: 436 GGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL-LPGDLLERGKPLHAYIV--- 491
Query: 261 TSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPV 320
S G + V L+ ++ K G++ S++ F+ + R ++ WNAM++A G
Sbjct: 492 -SAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD---NRNIITWNAMLAANAHHGHGE 547
Query: 321 EGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQIL 380
E L L M G + + + LSA A++ L G+ +H + +G + + +
Sbjct: 548 EVLKLVSKMRSFGVSL-DQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFE----HDSFI 602
Query: 381 ATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGL 440
+ DMYSKCG + ++ +V++ + +N +I L +G E+ F++M E G+
Sbjct: 603 FNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGI 662
Query: 441 QPNAGTFLGALSACSHSGFLERG----RQIFRDMSFSTSLTLEHYACYIDLLARVGCIEE 496
+P TF+ L+ACSH G +++G I RD F +EH C IDLL R G + E
Sbjct: 663 KPGHVTFVSLLTACSHGGLVDKGLAYYDMIARD--FGLEPAIEHCICVIDLLGRSGRLAE 720
Query: 497 AIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALAS 556
A ++ MP KPN+ VW +LL C +H ++ ++ ++ L +++P YV+ +N A+
Sbjct: 721 AETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFAT 780
Query: 557 DRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKH 616
+W DV +R +M K IKK+ SW+ + V F +G +HPQ IY L + K
Sbjct: 781 TGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKL 840
Query: 617 MKAPSHCQSVS 627
+K + S
Sbjct: 841 IKESGYVADTS 851
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 209/445 (46%), Gaps = 21/445 (4%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
A +F + N +N ++ + G F + + P+ F + L+ C R
Sbjct: 11 ARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGR 70
Query: 138 SKDA-RCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCW 196
S R QVH + K G L+D VS ++ +Y + V +RKVF+E+PDR+ V W
Sbjct: 71 SGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGV-YGLVSCSRKVFEEMPDRN-VVSW 128
Query: 197 TSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSEL 256
TSL+ GY+ G EEV+ ++ M + + ++M V+S+C L+ + R ++
Sbjct: 129 TSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR------QI 182
Query: 257 IDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQD 316
I +G +V L+ + G GNV+ + FD++S +R + WN++ +AY Q+
Sbjct: 183 IGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS---ERDTISWNSIAAAYAQN 239
Query: 317 GCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGS 376
G E +F +M + N T+ ++LS + G+ +H ++ +G +
Sbjct: 240 GHIEESFRIFSLM-RRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV-- 296
Query: 377 NQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMP 436
+ +L+ MY+ GR A VF+ +KD++ +N+++ +G DAL L M
Sbjct: 297 --CVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI 354
Query: 437 EFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEHYA--CYIDLLARVGCI 494
G N TF AL+AC F E+GR I + + L + + ++G +
Sbjct: 355 SSGKSVNYVTFTSALAACFTPDFFEKGR-ILHGLVVVSGLFYNQIIGNALVSMYGKIGEM 413
Query: 495 EEAIEVVTSMPFKPNNFVWGALLGG 519
E+ V+ MP + + W AL+GG
Sbjct: 414 SESRRVLLQMP-RRDVVAWNALIGG 437
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 163/353 (46%), Gaps = 32/353 (9%)
Query: 174 FRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVS 233
F V AR +FD +P R+EV+ W ++++G + G E ++ F M ++P + + S
Sbjct: 5 FGRVKPARHLFDIMPVRNEVS-WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIAS 63
Query: 234 VLSACSS-----LEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKS 288
+++AC E ++ +V S L+ D V+T +++L+G +G V S
Sbjct: 64 LVTACGRSGSMFREGVQVHGFVA-KSGLLSDVY---------VSTAILHLYGVYGLVSCS 113
Query: 289 RERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSA 348
R+ F+ + R VV W +++ Y G P E + +++ M EG N +M V+S+
Sbjct: 114 RKVFEEMP---DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVG-CNENSMSLVISS 169
Query: 349 CAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKD 408
C + D SLG+ + ++ K + S + SLI M G +D A +F+ +D
Sbjct: 170 CGLLKDESLGRQIIGQVV----KSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERD 225
Query: 409 VVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFR 468
+ +N++ A NG E++ R+F M F + N+ T LS H + GR I
Sbjct: 226 TISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIH- 284
Query: 469 DMSFSTSLTLEHYACYIDLLARV----GCIEEAIEVVTSMPFKPNNFVWGALL 517
+ + C + L R+ G EA V MP K + W +L+
Sbjct: 285 --GLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLM 334
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 152/551 (27%), Positives = 263/551 (47%), Gaps = 21/551 (3%)
Query: 81 VFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKD 140
VF + ++ +N+++ G L + + N TF+ L CF
Sbjct: 301 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 360
Query: 141 ARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLI 200
+H + G + + N LV++Y + + +R+V ++P R +V W +LI
Sbjct: 361 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGK-IGEMSESRRVLLQMP-RRDVVAWNALI 418
Query: 201 TGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDS 260
GYA+ ++ L F M + + T+VSVLSAC L +ER + ++
Sbjct: 419 GGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL-LPGDLLERGKPLHAYIV--- 474
Query: 261 TSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPV 320
S G + V L+ ++ K G++ S++ F+ + R ++ WNAM++A G
Sbjct: 475 -SAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD---NRNIITWNAMLAANAHHGHGE 530
Query: 321 EGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQIL 380
E L L M G + + + LSA A++ L G+ +H + +G + + +
Sbjct: 531 EVLKLVSKMRSFGVSL-DQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFE----HDSFI 585
Query: 381 ATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGL 440
+ DMYSKCG + ++ +V++ + +N +I L +G E+ F++M E G+
Sbjct: 586 FNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGI 645
Query: 441 QPNAGTFLGALSACSHSGFLERG----RQIFRDMSFSTSLTLEHYACYIDLLARVGCIEE 496
+P TF+ L+ACSH G +++G I RD F +EH C IDLL R G + E
Sbjct: 646 KPGHVTFVSLLTACSHGGLVDKGLAYYDMIARD--FGLEPAIEHCICVIDLLGRSGRLAE 703
Query: 497 AIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALAS 556
A ++ MP KPN+ VW +LL C +H ++ ++ ++ L +++P YV+ +N A+
Sbjct: 704 AETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFAT 763
Query: 557 DRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKH 616
+W DV +R +M K IKK+ SW+ + V F +G +HPQ IY L + K
Sbjct: 764 TGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKL 823
Query: 617 MKAPSHCQSVS 627
+K + S
Sbjct: 824 IKESGYVADTS 834
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 214/426 (50%), Gaps = 24/426 (5%)
Query: 81 VFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKD 140
+F + + +N+I A+ GH+ F +F+ ++ N T S LL V
Sbjct: 200 IFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDH 259
Query: 141 ARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLI 200
+ +H + KMG+ + V N L+ +YA R+V A VF ++P + ++ W SL+
Sbjct: 260 QKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVE-ANLVFKQMPTK-DLISWNSLM 317
Query: 201 TGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDS 260
+ G + L L M+ T S L+AC + + + R ++ L +
Sbjct: 318 ASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVV---- 373
Query: 261 TSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPV 320
+G + + LV ++GK G + +SR ++ +R VV WNA+I Y +D P
Sbjct: 374 --SGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP---RRDVVAWNALIGGYAEDEDPD 428
Query: 321 EGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGD-LSLGKWVHEYLISIGHKGNIGSNQI 379
+ L+ F+ M EG + N++T+VSVLSAC GD L GK +H Y++S G + S++
Sbjct: 429 KALAAFQTMRVEGVS-SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFE----SDEH 483
Query: 380 LATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFG 439
+ SLI MY+KCG L ++++F +++++ +NAM+ A +G GE+ L+L KM FG
Sbjct: 484 VKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFG 543
Query: 440 LQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEH----YACYIDLLARVGCIE 495
+ + +F LSA + LE G+Q+ + L EH + D+ ++ G I
Sbjct: 544 VSLDQFSFSEGLSAAAKLAVLEEGQQLH---GLAVKLGFEHDSFIFNAAADMYSKCGEIG 600
Query: 496 EAIEVV 501
E ++++
Sbjct: 601 EVVKML 606
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 205/434 (47%), Gaps = 21/434 (4%)
Query: 89 NIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDA-RCAEQV 147
N +N ++ + G F + + P+ F + L+ C RS R QV
Sbjct: 5 NEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQV 64
Query: 148 HAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSG 207
H + K G L+D VS ++ +Y + V +RKVF+E+PDR+ V WTSL+ GY+ G
Sbjct: 65 HGFVAKSGLLSDVYVSTAILHLYGV-YGLVSCSRKVFEEMPDRN-VVSWTSLMVGYSDKG 122
Query: 208 HGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESC 267
EEV+ ++ M + + ++M V+S+C L+ + R ++I +G
Sbjct: 123 EPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR------QIIGQVVKSGLES 176
Query: 268 HDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFR 327
+V L+ + G GNV+ + FD++S +R + WN++ +AY Q+G E +F
Sbjct: 177 KLAVENSLISMLGSMGNVDYANYIFDQMS---ERDTISWNSIAAAYAQNGHIEESFRIFS 233
Query: 328 IMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDM 387
+M + N T+ ++LS + G+ +H ++ +G + + +L+ M
Sbjct: 234 LM-RRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV----CVCNTLLRM 288
Query: 388 YSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTF 447
Y+ GR A VF+ +KD++ +N+++ +G DAL L M G N TF
Sbjct: 289 YAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTF 348
Query: 448 LGALSACSHSGFLERGRQIFRDMSFSTSLTLEHYA--CYIDLLARVGCIEEAIEVVTSMP 505
AL+AC F E+GR I + + L + + ++G + E+ V+ MP
Sbjct: 349 TSALAACFTPDFFEKGR-ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 407
Query: 506 FKPNNFVWGALLGG 519
+ + W AL+GG
Sbjct: 408 -RRDVVAWNALIGG 420
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 111/231 (48%), Gaps = 12/231 (5%)
Query: 301 RGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDL-SLGK 359
R V WN M+S V+ G +EG+ FR M G +P+ + S+++AC + G + G
Sbjct: 4 RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLG-IKPSSFVIASLVTACGRSGSMFREGV 62
Query: 360 WVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGL 419
VH ++ K + S+ ++T+++ +Y G + +++VFE ++VV + ++++G
Sbjct: 63 QVHGFVA----KSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGY 118
Query: 420 AVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM---SFSTSL 476
+ GE E+ + ++ M G+ N + +S+C GRQI + + L
Sbjct: 119 SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKL 178
Query: 477 TLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVE 527
+E+ I +L +G ++ A + M + + W ++ + +E
Sbjct: 179 AVEN--SLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQNGHIE 226
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 143/448 (31%), Positives = 242/448 (54%), Gaps = 35/448 (7%)
Query: 179 FARKVFD--EIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQ---NLRPQNDT--- 230
+A +FD EIP+ + ++I ++S L+ F +MV++ ++ P T
Sbjct: 65 YASSIFDSIEIPNS---FVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHF 121
Query: 231 -MVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSR 289
+V+ L AC +I WV + DS H + +Y+ K + +R
Sbjct: 122 LIVACLKACFFSVGKQIHCWVVKNGVFLSDS-------HVQTGVLRIYVEDKL--LLDAR 172
Query: 290 ERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSAC 349
+ FD I + VV W+ +++ YV+ G EGL +FR M+ +G P+ ++ + L+AC
Sbjct: 173 KVFDEIP---QPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGL-EPDEFSVTTALTAC 228
Query: 350 AQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDV 409
AQ+G L+ GKW+HE+ + K I S+ + T+L+DMY+KCG ++ A EVF+ ++V
Sbjct: 229 AQVGALAQGKWIHEF---VKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNV 285
Query: 410 VLFNAMIMGLAVNGEGEDALRLFYKMP-EFGLQPNAGTFLGALSACSHSGFLERGRQIFR 468
+ A+I G A G + A+ ++ E G++P++ LG L+AC+H GFLE GR +
Sbjct: 286 FSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLE 345
Query: 469 DMSFSTSLTL--EHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRV 526
+M +T EHY+C +DL+ R G +++A+ ++ MP KP VWGALL GC H V
Sbjct: 346 NMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNV 405
Query: 527 ELAQEVSKRLVEVDP----TSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSS 582
EL + K L++++ V L+N S ++ + S +R + ++G++K PG S
Sbjct: 406 ELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWS 465
Query: 583 WISVDGVVHEFLVGYLSHPQIEGIYLTL 610
+ VDG V +F+ G +SHP + I+ +
Sbjct: 466 VLEVDGNVTKFVSGDVSHPNLLQIHTVI 493
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 172/350 (49%), Gaps = 21/350 (6%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAE--QGHVS-HVFSLFNDLKHRVLAPNDFTFSFLLKV 134
A +F + PN F ++ +IR+ + Q H+ F L + +AP+ TF FL+
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVA 125
Query: 135 CFRSKDARCAEQVHAHIQKMG-YLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEV 193
C ++ +Q+H + K G +L+D V G++ +Y + ++ ARKVFDEIP + +V
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVED-KLLLDARKVFDEIP-QPDV 183
Query: 194 TCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFL 253
W L+ GY + G G E L++F M+ + L P ++ + L+AC+ + +W++
Sbjct: 184 VKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIH-- 241
Query: 254 SELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAY 313
E + + V T LV ++ K G +E + E F +++ +R V W A+I Y
Sbjct: 242 -EFVKKKSWIESDVF--VGTALVDMYAKCGCIETAVEVFKKLT---RRNVFSWAALIGGY 295
Query: 314 VQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGN 373
G + ++ + +E +P+ V ++ VL+ACA G L G+ + E ++ +
Sbjct: 296 AAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLE---NMEARYE 352
Query: 374 IGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNG 423
I + ++D+ + GRLD A + E K + A + G +NG
Sbjct: 353 ITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPL----ASVWGALLNG 398
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 143/511 (27%), Positives = 247/511 (48%), Gaps = 21/511 (4%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
A+ +FH + PN+ +N +I ++G ++ L + F LK C
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLKACSF 250
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVF--DEIPDRSEVTC 195
+Q+H + K G + P + L+ +Y+ ++++A VF +++ S V
Sbjct: 251 GGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSN-CGSLIYAADVFHQEKLAVNSSVAV 309
Query: 196 WTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSE 255
W S+++G+ + E L L + + +L + T+ L C + ++ V+ L
Sbjct: 310 WNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLV- 368
Query: 256 LIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQ 315
+G V ++LV L GN++ + + F R+ + ++ ++ +I V+
Sbjct: 369 -----VVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLP---NKDIIAFSGLIRGCVK 420
Query: 316 DGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIG 375
G LFR ++K G + + ++L C+ + L GK +H I G++
Sbjct: 421 SGFNSLAFYLFRELIKLGLD-ADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYE---- 475
Query: 376 SNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKM 435
S + AT+L+DMY KCG +D +F+ + +DVV + +I+G NG E+A R F+KM
Sbjct: 476 SEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKM 535
Query: 436 PEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLT--LEHYACYIDLLARVGC 493
G++PN TFLG LSAC HSG LE R M L LEHY C +DLL + G
Sbjct: 536 INIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGL 595
Query: 494 IEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANA 553
+EA E++ MP +P+ +W +LL C H L ++++L++ P Y L+NA
Sbjct: 596 FQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNA 655
Query: 554 LASDRQWNDVSALRLEMREKGIKKQPGSSWI 584
A+ W+ +S +R ++ G K+ G SWI
Sbjct: 656 YATLGMWDQLSKVREAAKKLG-AKESGMSWI 685
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 133/492 (27%), Positives = 231/492 (46%), Gaps = 53/492 (10%)
Query: 132 LKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRS 191
L+ C + + + E + AH+ K G + ++N ++++Y FR + A KVFDE+ +R+
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVD-FRLLSDAHKVFDEMSERN 70
Query: 192 EVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVS-VLSACS-----SLEISK 245
VT WT++++GY G + ++L+ M+ N+ M S VL AC L I
Sbjct: 71 IVT-WTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILV 129
Query: 246 IERW--------VYFLSELIDDSTSNG-------------ESCHDSVNTVLVYLFGKWGN 284
ER V ++ ++D NG S NT L+ + K G
Sbjct: 130 YERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNT-LISGYCKAGL 188
Query: 285 VEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVS 344
++++ F R+ + VV WN +IS +V G P L M +EG + +
Sbjct: 189 MDEAVTLFHRMP---QPNVVSWNCLISGFVDKGSP-RALEFLVRMQREGLVL-DGFALPC 243
Query: 345 VLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEH- 403
L AC+ G L++GK +H ++ K + S+ ++LIDMYS CG L A +VF
Sbjct: 244 GLKACSFGGLLTMGKQLHCCVV----KSGLESSPFAISALIDMYSNCGSLIYAADVFHQE 299
Query: 404 --AVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLE 461
AV+ V ++N+M+ G +N E E AL L ++ + L ++ T GAL C + L
Sbjct: 300 KLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLR 359
Query: 462 RGRQIFRDMSFSTSLTLEHY--ACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGG 519
G Q+ + + L++ + +DL A VG I++A ++ +P K + + L+ G
Sbjct: 360 LGLQV-HSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNK-DIIAFSGLIRG 417
Query: 520 CLLHSRVELA----QEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGI 575
C+ LA +E+ K ++ D + + ++LAS + L + +KG
Sbjct: 418 CVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCI---KKGY 474
Query: 576 KKQPGSSWISVD 587
+ +P ++ VD
Sbjct: 475 ESEPVTATALVD 486
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 115/523 (21%), Positives = 218/523 (41%), Gaps = 44/523 (8%)
Query: 50 IHARIFQLGAHQDNLLATRLIGHYPP-RI---ALRVFHYLHNPNIFPFNAIIRVLAEQGH 105
I A + + G Q+ +A +I Y R+ A +VF + NI + ++ G
Sbjct: 27 IQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGK 86
Query: 106 VSHVFSLFND-LKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSN 164
+ L+ L A N+F +S +LK C D + V+ I K D + N
Sbjct: 87 PNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMN 146
Query: 165 GLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNL 224
+V +Y + R ++ A F EI R T W +LI+GY ++G +E + LFH M + N+
Sbjct: 147 SVVDMYVKNGR-LIEANSSFKEIL-RPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNV 204
Query: 225 RPQNDTMVSVLSACS--SLE-ISKIERWVYFLSEL----------IDDSTSNGESCHDSV 271
N + + S +LE + +++R L + G+ H V
Sbjct: 205 VSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCV 264
Query: 272 N-----------TVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPV 320
+ L+ ++ G++ + + F + A V WN+M+S ++ +
Sbjct: 265 VKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENE 324
Query: 321 EGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQIL 380
L L + + + + T+ L C +L LG VH ++ G++ + I+
Sbjct: 325 AALWLL-LQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYE----LDYIV 379
Query: 381 ATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGL 440
+ L+D+++ G + A ++F +KD++ F+ +I G +G A LF ++ + GL
Sbjct: 380 GSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGL 439
Query: 441 QPNAGTFLGALSACSHSGFLERGRQI----FRDMSFSTSLTLEHYACYIDLLARVGCIEE 496
+ L CS L G+QI + S +T +D+ + G I+
Sbjct: 440 DADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTA---TALVDMYVKCGEIDN 496
Query: 497 AIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEV 539
+ + M + + W ++ G + RVE A +++ +
Sbjct: 497 GVVLFDGM-LERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINI 538
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 168/555 (30%), Positives = 272/555 (49%), Gaps = 37/555 (6%)
Query: 45 SHLLQIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIR-V 99
S + Q H + + G + L +L+ Y A ++F + NI +N +I V
Sbjct: 53 SDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGV 112
Query: 100 LAEQGHVSHV----FSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMG 155
+ G +H F + + ++ + +F L+++C S + + Q+H + K G
Sbjct: 113 IQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQG 172
Query: 156 YLNDPSVSNGLVAVYAR-GFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQ 214
+ S LV Y + G +V AR+VF+ + DR ++ W +L++ Y +G +E
Sbjct: 173 LESSCFPSTSLVHFYGKCGL--IVEARRVFEAVLDR-DLVLWNALVSSYVLNGMIDEAFG 229
Query: 215 LFHMMVRQNLRPQND--TMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVN 272
L +M R + D T S+LSAC + +I ++ +S D V
Sbjct: 230 LLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHAILFKVSYQFDIP----------VA 279
Query: 273 TVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKE 332
T L+ ++ K ++ +RE F+ + R VV WNAMI + Q+G E + LF M+ E
Sbjct: 280 TALLNMYAKSNHLSDARECFESMVV---RNVVSWNAMIVGFAQNGEGREAMRLFGQMLLE 336
Query: 333 GTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCG 392
+P+ +T SVLS+CA+ + K V + G + +A SLI YS+ G
Sbjct: 337 -NLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLS----VANSLISSYSRNG 391
Query: 393 RLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALS 452
L A F D+V + ++I LA +G E++L++F M + LQP+ TFL LS
Sbjct: 392 NLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQ-KLQPDKITFLEVLS 450
Query: 453 ACSHSGFLERGRQIFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNN 510
ACSH G ++ G + F+ M+ + EHY C IDLL R G I+EA +V+ SMP +P+
Sbjct: 451 ACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPST 510
Query: 511 FVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEM 570
A GGC +H + E + +K+L+E++PT Y +L+NA S+ WN + LR
Sbjct: 511 HALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRE 570
Query: 571 REKGIK-KQPGSSWI 584
R K PG SW+
Sbjct: 571 RRNCYNPKTPGCSWL 585
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 153/509 (30%), Positives = 252/509 (49%), Gaps = 33/509 (6%)
Query: 116 LKHRVLAPNDF---TFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYAR 172
L R+L F T + +L VC + + +HA GY + SV N L+ Y +
Sbjct: 143 LLKRMLGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFK 202
Query: 173 GFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMV 232
+V R VFD + R+ +T T++I+G ++ E+ L+LF +M R + P + T +
Sbjct: 203 CGCSVS-GRGVFDGMSHRNVITL-TAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYL 260
Query: 233 SVLSACSS----LEISKIER--WVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVE 286
S L+ACS +E +I W Y + E C + + L+ ++ K G++E
Sbjct: 261 SALAACSGSQRIVEGQQIHALLWKYGI---------ESELC---IESALMDMYSKCGSIE 308
Query: 287 KSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVL 346
+ F+ + + V ++ Q+G E + F M++ G +V + +VL
Sbjct: 309 DAWTIFESTTEVDE---VSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANV-VSAVL 364
Query: 347 SACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVS 406
L LGK +H +I K N + LI+MYSKCG L ++ VF
Sbjct: 365 GVSFIDNSLGLGKQLHSLVI----KRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPK 420
Query: 407 KDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQI 466
++ V +N+MI A +G G AL+L+ +M ++P TFL L ACSH G +++GR++
Sbjct: 421 RNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGREL 480
Query: 467 FRDMSFSTSLT--LEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHS 524
+M + EHY C ID+L R G ++EA + S+P KP+ +W ALLG C H
Sbjct: 481 LNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHG 540
Query: 525 RVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWI 584
E+ + +++L + P SS ++++AN +S +W + + M+ G+ K+ G S I
Sbjct: 541 DTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSI 600
Query: 585 SVDGVVHEFLVGYLSHPQIEGIYLTLTGL 613
++ H F+V HPQ E IY L+GL
Sbjct: 601 EIEHKTHSFVVEDKLHPQAEAIYDVLSGL 629
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 178/393 (45%), Gaps = 24/393 (6%)
Query: 81 VFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKD 140
VF + + N+ A+I L E LF+ ++ ++ PN T+ L C S+
Sbjct: 212 VFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQR 271
Query: 141 ARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLI 200
+Q+HA + K G ++ + + L+ +Y++ ++ A +F+ + EV+ T ++
Sbjct: 272 IVEGQQIHALLWKYGIESELCIESALMDMYSK-CGSIEDAWTIFESTTEVDEVS-MTVIL 329
Query: 201 TGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDS 260
G AQ+G EE +Q F M++ + + + +VL +S I+ + +L
Sbjct: 330 VGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLG------VSFIDNSLGLGKQLHSLV 383
Query: 261 TSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPV 320
S + VN L+ ++ K G++ S+ F R+ KR V WN+MI+A+ + G +
Sbjct: 384 IKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP---KRNYVSWNSMIAAFARHGHGL 440
Query: 321 EGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQIL 380
L L+ M +P VT +S+L AC+ +G + G+ E L + I
Sbjct: 441 AALKLYEEMTTL-EVKPTDVTFLSLLHACSHVGLIDKGR---ELLNEMKEVHGIEPRTEH 496
Query: 381 ATSLIDMYSKCGRLDRAKEVFEH-AVSKDVVLFNAMIMGLAVNGEGE----DALRLFYKM 435
T +IDM + G L AK + + D ++ A++ + +G+ E A +LF
Sbjct: 497 YTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTA 556
Query: 436 PEFGLQPNAGTFLGALSACSHSGFLERGRQIFR 468
P+ ++ L A S + ER + I R
Sbjct: 557 PD----SSSAHILIANIYSSRGKWKERAKTIKR 585
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 179/604 (29%), Positives = 287/604 (47%), Gaps = 119/604 (19%)
Query: 63 NLLATRLIGHYPPRIALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLA 122
N L T LI + A +VF + + ++ +NA+I+ E + LF D+ +
Sbjct: 173 NTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEK--- 229
Query: 123 PNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARK 182
N T++ +V Y R + +V A +
Sbjct: 230 -NVVTWT-----------------------------------SMVYGYCR-YGDVREAYR 252
Query: 183 VFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVR--QNLRPQNDTMVSVLSACSS 240
+F E+P+R+ V+ WT++I+G+A + E L LF M + + P +T++S+ AC
Sbjct: 253 LFCEMPERNIVS-WTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGG 311
Query: 241 L---------------------------EISKIERWVYFLSELIDDSTS------NGESC 267
L ++K +Y S LI + S + +SC
Sbjct: 312 LGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSC 371
Query: 268 HDSVNTVLVYLFGKWGNVEKSRERFDRISA----------------AG------------ 299
+ +N L K G++E++ F+R+ + AG
Sbjct: 372 NIIINRYL-----KNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKL 426
Query: 300 -KRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLG 358
+ V W MIS VQ+ E SL MV+ G +P + T +LS+ +L G
Sbjct: 427 HDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCG-LKPLNSTYSVLLSSAGATSNLDQG 485
Query: 359 KWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMG 418
K +H + + IL SL+ MY+KCG ++ A E+F V KD V +N+MIMG
Sbjct: 486 KHIH--CVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMG 543
Query: 419 LAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFSTSL 476
L+ +G + AL LF +M + G +PN+ TFLG LSACSHSG + RG ++F+ M ++S
Sbjct: 544 LSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQP 603
Query: 477 TLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVE----LAQEV 532
++HY IDLL R G ++EA E ++++PF P++ V+GALLG C L+ R + +A+
Sbjct: 604 GIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERA 663
Query: 533 SKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHE 592
+ RL+E+DP ++ G+V L N A + + +R EM KG+KK PG SW+ V+G +
Sbjct: 664 AMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANV 723
Query: 593 FLVG 596
FL G
Sbjct: 724 FLSG 727
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 143/349 (40%), Gaps = 87/349 (24%)
Query: 170 YARGFRN-------------VVFARKVFDEIPDR---SEVTCWTSLITGYAQSGHGEEVL 213
Y RGF N +V AR + D+IP R + V WTSL++ YA++G+ +E
Sbjct: 38 YRRGFSNEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEAR 97
Query: 214 QLFHMMVRQNLRPQNDTMVSVLSACSSL--------EISK-IERWVYFLSELIDDSTSNG 264
LF +M +N+ N M++ C + E+ K + W L+ L DD S
Sbjct: 98 VLFEVMPERNIVTCN-AMLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSED 156
Query: 265 ---------ESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQ 315
E S NT++ L + G++EK+++ FD A R VV WNAMI Y++
Sbjct: 157 AVELFDEMPERNVVSWNTLVTGLI-RNGDMEKAKQVFD---AMPSRDVVSWNAMIKGYIE 212
Query: 316 DGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIG 375
+ E LF GD+S
Sbjct: 213 NDGMEEAKLLF--------------------------GDMS------------------E 228
Query: 376 SNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKM 435
N + TS++ Y + G + A +F +++V + AMI G A N +AL LF +M
Sbjct: 229 KNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEM 288
Query: 436 PE--FGLQPNAGTFLGALSACSHSG--FLERGRQIFRDMSFSTSLTLEH 480
+ + PN T + AC G F G Q+ + + T++H
Sbjct: 289 KKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDH 337
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 12/178 (6%)
Query: 355 LSLGKWVHE--YLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLF 412
LS G VH L I +G+I + + TSL+ Y+K G LD A+ +FE +++V
Sbjct: 53 LSEGGLVHARHLLDKIPQRGSI-NRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTC 111
Query: 413 NAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSF 472
NAM+ G +A LF +MP+ N ++ L+A G E ++F +M
Sbjct: 112 NAMLTGYVKCRRMNEAWTLFREMPK-----NVVSWTVMLTALCDDGRSEDAVELFDEMPE 166
Query: 473 STSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQ 530
++ + + L R G +E+A +V +MP + + W A++ G + + +E A+
Sbjct: 167 RNVVS---WNTLVTGLIRNGDMEKAKQVFDAMPSR-DVVSWNAMIKGYIENDGMEEAK 220
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 222 bits (565), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 144/487 (29%), Positives = 245/487 (50%), Gaps = 36/487 (7%)
Query: 159 DPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHM 218
D N ++A Y R ++ A VF P+ ++ W +LI GYAQ+G+ EE L++
Sbjct: 192 DSVARNAMIAAYCRE-GDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVS 250
Query: 219 MVRQNLRPQNDTMVSVLSACSSLEISKIERWVY------------FLSELIDDSTSNGES 266
M L+ + +VL+ SSL+ KI + V+ F+S I D +
Sbjct: 251 MEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGN 310
Query: 267 CHDSVNTVLVYLFGKW-------------GNVEKSRERFDRISAAGKRGVVPWNAMISAY 313
+ + L+Y FG G + +++ FD +S ++ +V W AM Y
Sbjct: 311 MKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLS---EKNLVVWTAMFLGY 367
Query: 314 VQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGN 373
+ P L L R + T P+ + MVSVL AC+ + GK +H + + G
Sbjct: 368 LNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTG---- 423
Query: 374 IGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFY 433
I ++ L T+ +DMYSKCG ++ A+ +F+ + +D V++NAMI G A +G + + F
Sbjct: 424 ILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFE 483
Query: 434 KMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARV 491
M E G +P+ TF+ LSAC H G + G + F+ M +++ S HY C IDL +
Sbjct: 484 DMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKA 543
Query: 492 GCIEEAIEVVTSMP-FKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVML 550
+++AIE++ + + + + GA L C + EL +EV ++L+ ++ ++ Y+ +
Sbjct: 544 YRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQI 603
Query: 551 ANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTL 610
ANA AS +W+++ +R +MR K ++ G SW ++D H F +SH + E IY L
Sbjct: 604 ANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAML 663
Query: 611 TGLAKHM 617
+ K +
Sbjct: 664 HFVTKDL 670
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 171/385 (44%), Gaps = 52/385 (13%)
Query: 78 ALRVFHYLHNPNI---FPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKV 134
AL VF NP + +N +I A+ G+ + ++ L ++ +F +L V
Sbjct: 212 ALSVF--WRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNV 269
Query: 135 CFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYAR--------------GFRNV--- 177
K + ++VHA + K G ++ VS+G+V VY + GF N+
Sbjct: 270 LSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSA 329
Query: 178 -------------VFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMV-RQN 223
V A+++FD + +++ V WT++ GY + VL+L + +
Sbjct: 330 SSMIVGYSSQGKMVEAKRLFDSLSEKNLVV-WTAMFLGYLNLRQPDSVLELARAFIANET 388
Query: 224 LRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWG 283
P + MVSVL ACS ++ ++ E+ S G + T V ++ K G
Sbjct: 389 NTPDSLVMVSVLGACS------LQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCG 442
Query: 284 NVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMV 343
NVE + FD ++ +R V +NAMI+ G + F M EG +P+ +T +
Sbjct: 443 NVEYAERIFD---SSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMT-EGGFKPDEITFM 498
Query: 344 SVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFE- 402
++LSAC G + G+ +Y S+ NI T +ID+Y K RLD+A E+ E
Sbjct: 499 ALLSACRHRGLVLEGE---KYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEG 555
Query: 403 -HAVSKDVVLFNAMIMGLAVNGEGE 426
V KD V+ A + + N E
Sbjct: 556 IDQVEKDAVILGAFLNACSWNKNTE 580
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 89/171 (52%), Gaps = 11/171 (6%)
Query: 273 TVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQ-DGCPVEGLSLFRIMVK 331
++ + K+ NV+++RE F+ S +R ++ +N ++S + + DGC E + +F M +
Sbjct: 58 NAVIAAYVKFNNVKEARELFE--SDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHR 115
Query: 332 EGTTRP--NHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYS 389
+ + T+ +++ A++ ++ G+ +H L+ G+ G + +SLI MYS
Sbjct: 116 KEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGT----KFAVSSLIHMYS 171
Query: 390 KCGRLDRAKEVFEHAVSK--DVVLFNAMIMGLAVNGEGEDALRLFYKMPEF 438
KCG+ +F + + D V NAMI G+ + AL +F++ PE
Sbjct: 172 KCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPEL 222
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 158/578 (27%), Positives = 273/578 (47%), Gaps = 26/578 (4%)
Query: 50 IHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQGH 105
IH+ I G + +L T L+ Y A+RV + ++F + +++
Sbjct: 246 IHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLR 305
Query: 106 VSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNG 165
F +++ L PN+FT+S +L +C + +Q+H+ K+G+ + V N
Sbjct: 306 AKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNA 365
Query: 166 LVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLR 225
LV +Y + + V A +VF + V WT+LI G G ++ L MV++ +
Sbjct: 366 LVDMYMKCSASEVEASRVFGAMVS-PNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVE 424
Query: 226 PQNDTMVSVLSACSSLEISK--IERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWG 283
P T+ VL ACS L + +E Y L +D G S D+ +
Sbjct: 425 PNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDA-----------YA 473
Query: 284 NVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMV 343
+ K ++ I + +R + + ++++ + + G LS+ M +G R + +++
Sbjct: 474 SSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGI-RMDQLSLP 532
Query: 344 SVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEH 403
+SA A +G L GK +H Y + G G + SL+DMYSKCG L+ AK+VFE
Sbjct: 533 GFISASANLGALETGKHLHCYSVKSGFSGAAS----VLNSLVDMYSKCGSLEDAKKVFEE 588
Query: 404 AVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERG 463
+ DVV +N ++ GLA NG AL F +M +P++ TFL LSACS+ + G
Sbjct: 589 IATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLG 648
Query: 464 RQIFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCL 521
+ F+ M ++ +EHY + +L R G +EEA VV +M KPN ++ LL C
Sbjct: 649 LEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACR 708
Query: 522 LHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGS 581
+ L ++++ + + + P+ Y++LA+ + R M EK + K+ G
Sbjct: 709 YRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGK 768
Query: 582 SWISVDGVVHEFLVGYLSH-PQIEGIYLTLTGLAKHMK 618
S + V G VH F+ ++ + GIY + + + +K
Sbjct: 769 STVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEIK 806
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 205/454 (45%), Gaps = 38/454 (8%)
Query: 131 LLKVCFR------SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYAR--GFRNVVFARK 182
L K C R S +R +H + K G L + + N L+++Y + G N ARK
Sbjct: 23 LQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWN---ARK 79
Query: 183 VFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLE 242
+FDE+ R+ V WT +I+ + +S L LF M+ P T SV+ +C+ L
Sbjct: 80 LFDEMSHRT-VFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGL- 137
Query: 243 ISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRG 302
R + + + G + V + L L+ K G +++ E F + A
Sbjct: 138 -----RDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNA---D 189
Query: 303 VVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVH 362
+ W MIS+ V E L + MVK G PN T V +L A + +G L GK +H
Sbjct: 190 TISWTMMISSLVGARKWREALQFYSEMVKAGVP-PNEFTFVKLLGASSFLG-LEFGKTIH 247
Query: 363 EYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVN 422
+I G I N +L TSL+D YS+ +++ A V + +DV L+ +++ G N
Sbjct: 248 SNIIVRG----IPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRN 303
Query: 423 GEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRD---MSFSTSLTLE 479
++A+ F +M GLQPN T+ LS CS L+ G+QI + F S +
Sbjct: 304 LRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVG 363
Query: 480 HYACYIDLLARVGCIE-EAIEVVTSMPFKPNNFVWGALLGGCLLHSRVE----LAQEVSK 534
+ +D+ + E EA V +M PN W L+ G + H V+ L E+ K
Sbjct: 364 N--ALVDMYMKCSASEVEASRVFGAM-VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVK 420
Query: 535 RLVEVDPTSSGGYVMLANALASDRQWNDVSALRL 568
R VE + + G + + L R+ ++ A L
Sbjct: 421 REVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLL 454
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 192/415 (46%), Gaps = 26/415 (6%)
Query: 48 LQIHARIFQLGAHQDNLLATRLIGHYPPRIAL----RVFHYLHNPNIFPFNAIIRVLAEQ 103
L IH + + G ++ L L+ Y + ++F + + +F + +I +
Sbjct: 43 LHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKS 102
Query: 104 GHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVS 163
+ SLF ++ PN+FTFS +++ C +D +VH + K G+ + V
Sbjct: 103 QEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVG 162
Query: 164 NGLVAVYAR--GFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVR 221
+ L +Y++ F+ A ++F + + ++ WT +I+ + E LQ + MV+
Sbjct: 163 SSLSDLYSKCGQFKE---ACELFSSLQNADTIS-WTMMISSLVGARKWREALQFYSEMVK 218
Query: 222 QNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGK 281
+ P T V +L A S L + F + + G + + T LV + +
Sbjct: 219 AGVPPNEFTFVKLLGASSFLGLE-------FGKTIHSNIIVRGIPLNVVLKTSLVDFYSQ 271
Query: 282 WGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVT 341
+ +E + ++++G++ V W +++S +V++ E + F M G +PN+ T
Sbjct: 272 FSKMEDA---VRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLG-LQPNNFT 327
Query: 342 MVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLD-RAKEV 400
++LS C+ + L GK +H I +G + + + +L+DMY KC + A V
Sbjct: 328 YSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTD----VGNALVDMYMKCSASEVEASRV 383
Query: 401 FEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACS 455
F VS +VV + +I+GL +G +D L +M + ++PN T G L ACS
Sbjct: 384 FGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACS 438
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 159/574 (27%), Positives = 274/574 (47%), Gaps = 44/574 (7%)
Query: 17 LLPFRSSCSIVDHTPTTFTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPPR 76
LLPF C V QG +H + G D+ + LI Y
Sbjct: 157 LLPFCGQCGFVS----------QGR-------SVHGVAAKSGLELDSQVKNALISFYSKC 199
Query: 77 IALR----VFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLL 132
L +F + + + +N +I ++ G ++F ++ + + + T LL
Sbjct: 200 AELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLL 259
Query: 133 KVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSE 192
E +H + K G +ND SV LV Y+R +V A +++ S
Sbjct: 260 SAHVSH------EPLHCLVVKCGMVNDISVVTSLVCAYSR-CGCLVSAERLYASAKQDSI 312
Query: 193 VTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYF 252
V TS+++ YA+ G + + F + ++ +V +L C K +
Sbjct: 313 VG-LTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGC------KKSSHIDI 365
Query: 253 LSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISA 312
L + +G V L+ ++ K+ +VE F+++ + ++ WN++IS
Sbjct: 366 GMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQ---ETPLISWNSVISG 422
Query: 313 YVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKG 372
VQ G +F M+ G P+ +T+ S+L+ C+Q+ L+LGK +H Y + +
Sbjct: 423 CVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTL----RN 478
Query: 373 NIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLF 432
N + + T+LIDMY+KCG +A+ VF+ + +N+MI G +++G AL +
Sbjct: 479 NFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCY 538
Query: 433 YKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDLLAR 490
+M E GL+P+ TFLG LSAC+H GF++ G+ FR M F S TL+HYA + LL R
Sbjct: 539 LEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGR 598
Query: 491 VGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVML 550
EA+ ++ M KP++ VWGALL C++H +E+ + V++++ +D + G YV++
Sbjct: 599 ACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLM 658
Query: 551 ANALASDRQWNDVSALRLEMREKGIKKQPGSSWI 584
+N A++ W+DV +R M++ G G S I
Sbjct: 659 SNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 190/430 (44%), Gaps = 28/430 (6%)
Query: 107 SHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDA--RCAEQVHAHIQKMGYLNDPSVSN 164
S ++F DL L PN FT S L+ S ++ EQV H+ K G V
Sbjct: 30 SSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKT 89
Query: 165 GLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNL 224
L+ +Y + V A+ +FDE+P+R V W +LI GY+++G+ + +LF +M++Q
Sbjct: 90 SLLNLYLKK-GCVTSAQMLFDEMPERDTVV-WNALICGYSRNGYECDAWKLFIVMLQQGF 147
Query: 225 RPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGN 284
P T+V++L C R V+ + + +G V L+ + K
Sbjct: 148 SPSATTLVNLLPFCGQCGFVSQGRSVHGV------AAKSGLELDSQVKNALISFYSKCAE 201
Query: 285 VEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVS 344
+ + F + + V WN MI AY Q G E +++F+ M E + VT+++
Sbjct: 202 LGSAEVLFREMK---DKSTVSWNTMIGAYSQSGLQEEAITVFKNMF-EKNVEISPVTIIN 257
Query: 345 VLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHA 404
+LSA HE L + K + ++ + TSL+ YS+CG L A+ ++ A
Sbjct: 258 LLSAHVS----------HEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASA 307
Query: 405 VSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGR 464
+V +++ A G+ + A+ F K + ++ +A +G L C S ++ G
Sbjct: 308 KQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGM 367
Query: 465 QIFRDMSFSTSLTLEHYAC--YIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLL 522
+ + + L + I + ++ +E + + + P W +++ GC+
Sbjct: 368 SL-HGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETP-LISWNSVISGCVQ 425
Query: 523 HSRVELAQEV 532
R A EV
Sbjct: 426 SGRASTAFEV 435
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 178/597 (29%), Positives = 285/597 (47%), Gaps = 40/597 (6%)
Query: 36 NLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIF 91
NLL G H+L H + Q+ +LA LI Y A +VF + N+
Sbjct: 74 NLLDGINLHHHMLS-HPYCYS----QNVILANFLINMYAKCGNILYARQVFDTMPERNVV 128
Query: 92 PFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHI 151
+ A+I + G+ F LF+ + PN+FT S +L C +QVH
Sbjct: 129 SWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCRYEP----GKQVHGLA 183
Query: 152 QKMGYLNDPSVSNGLVAVYARGFRNVVF--ARKVFDEIPDRSEVTCWTSLITGYAQSGHG 209
K+G V+N ++++Y R A VF+ I ++ VT W S+I + G
Sbjct: 184 LKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVT-WNSMIAAFQCCNLG 242
Query: 210 EEVLQLFHMMVRQNLRPQNDTMVSVLSA---CSSLEISKIERWVYFLSELIDDSTSNGES 266
++ + +F M + T++++ S+ S L +++ + L L + +G
Sbjct: 243 KKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSL---TVKSGLV 299
Query: 267 CHDSVNTVLVYLFGKW-GNVEKSRERFDRISAAGKRGVVPWNAMISAY-VQDGCPVEGLS 324
V T L+ ++ + + + F +S R +V WN +I+A+ V D P +
Sbjct: 300 TQTEVATALIKVYSEMLEDYTDCYKLFMEMSHC--RDIVAWNGIITAFAVYD--PERAIH 355
Query: 325 LFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSL 384
LF + +E + P+ T SVL ACA + +H +I KG ++ +L SL
Sbjct: 356 LFGQLRQEKLS-PDWYTFSSVLKACAGLVTARHALSIHAQVI----KGGFLADTVLNNSL 410
Query: 385 IDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNA 444
I Y+KCG LD VF+ S+DVV +N+M+ +++G+ + L +F KM + P++
Sbjct: 411 IHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDS 467
Query: 445 GTFLGALSACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVT 502
TF+ LSACSH+G +E G +IFR M T L HYAC ID+L+R EA EV+
Sbjct: 468 ATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIK 527
Query: 503 SMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVE-VDPTSSGGYVMLANALASDRQWN 561
MP P+ VW ALLG C H L + + +L E V+PT+S Y+ ++N ++ +N
Sbjct: 528 QMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFN 587
Query: 562 DVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMK 618
+ + EM ++K+P SW + VHEF G P E +Y L L +K
Sbjct: 588 EANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLK 644
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 145/469 (30%), Positives = 236/469 (50%), Gaps = 35/469 (7%)
Query: 180 ARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACS 239
A KVFDEIP+ +V T++I + + E Q F ++ +RP T +V+ + +
Sbjct: 46 AHKVFDEIPEL-DVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSST 104
Query: 240 SLEISKIERW-------------VYFLSELID-----DSTSNGESCHDSV---NTV-LVY 277
+ K+ + V+ S +++ + ++ C D N V +
Sbjct: 105 TSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITN 164
Query: 278 LFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRP 337
L + + E A +R VV WNA+I + Q G E ++ F M++EG P
Sbjct: 165 LISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIP 224
Query: 338 NHVTMVSVLSACAQIGDLSLGKWVHEYLIS-IGHKGNIGSNQILATSLIDMYSKCGRLDR 396
N T ++A + I GK +H I +G + N+ + SLI YSKCG ++
Sbjct: 225 NESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNV----FVWNSLISFYSKCGNMED 280
Query: 397 AKEVFE--HAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKM-PEFGLQPNAGTFLGALSA 453
+ F +++V +N+MI G A NG GE+A+ +F KM + L+PN T LG L A
Sbjct: 281 SLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFA 340
Query: 454 CSHSGFLERGRQIFR----DMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPN 509
C+H+G ++ G F D L LEHYAC +D+L+R G +EA E++ SMP P
Sbjct: 341 CNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPG 400
Query: 510 NFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLE 569
W ALLGGC +HS LA+ + +++E+DP YVML+NA ++ W +VS +R +
Sbjct: 401 IGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRK 460
Query: 570 MREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMK 618
M+E G+K+ G SWI V + F+ ++ + +Y L +++H++
Sbjct: 461 MKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHLE 509
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 168/374 (44%), Gaps = 71/374 (18%)
Query: 76 RIALRVFHYLHNPNIFPFNAII-RVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKV 134
R A +VF + ++ A+I R + E HV F L + PN+FTF ++
Sbjct: 44 RNAHKVFDEIPELDVISATAVIGRFVKESRHV-EASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 135 CFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDE-------- 186
S+D + +Q+H + KMG ++ V + ++ Y + + AR+ FD+
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVK-LSTLTDARRCFDDTRDPNVVS 161
Query: 187 -----------------------IPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQN 223
+P+RS VT W ++I G++Q+G EE + F M+R+
Sbjct: 162 ITNLISGYLKKHEFEEALSLFRAMPERSVVT-WNAVIGGFSQTGRNEEAVNTFVDMLREG 220
Query: 224 LR-PQNDTMVSVLSACSSLEISKIERWVY-----FLSELIDDSTSNGESCHDSVNTVLVY 277
+ P T ++A S++ + ++ FL G+ + V L+
Sbjct: 221 VVIPNESTFPCAITAISNIASHGAGKSIHACAIKFL----------GKRFNVFVWNSLIS 270
Query: 278 LFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRP 337
+ K GN+E S F+++ +R +V WN+MI Y +G E +++F MVK+ RP
Sbjct: 271 FYSKCGNMEDSLLAFNKLEEE-QRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRP 329
Query: 338 NHVTMVSVLSAC-----AQIGDLSLGKWVHEY----LISIGHKGNIGSNQILATSLIDMY 388
N+VT++ VL AC Q G + K V++Y L+ + H ++DM
Sbjct: 330 NNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYA----------CMVDML 379
Query: 389 SKCGRLDRAKEVFE 402
S+ GR A+E+ +
Sbjct: 380 SRSGRFKEAEELIK 393
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 155/516 (30%), Positives = 235/516 (45%), Gaps = 94/516 (18%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRV--LAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVC 135
A VF ++ NP+ F FN IIR+ L E +S F +++ R + P+ TF F+ K C
Sbjct: 67 ATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSK-RFFVEMRRRSVPPDFHTFPFVFKAC 125
Query: 136 FRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTC 195
K+ H Q + + GL+ S++
Sbjct: 126 AAKKNGDLTLVKTLHCQALRF--------GLL-----------------------SDLFT 154
Query: 196 WTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSE 255
+LI Y+ + LQLF + PQ D +
Sbjct: 155 LNTLIRVYSLIAPIDSALQLF------DENPQRDVVTY---------------------- 186
Query: 256 LIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQ 315
VL+ K + ++RE FD + R +V WN++IS Y Q
Sbjct: 187 -----------------NVLIDGLVKAREIVRARELFDSMPL---RDLVSWNSLISGYAQ 226
Query: 316 DGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIG 375
E + LF MV G +P++V +VS LSACAQ GD GK +H+Y + +
Sbjct: 227 MNHCREAIKLFDEMVALGL-KPDNVAIVSTLSACAQSGDWQKGKAIHDYT----KRKRLF 281
Query: 376 SNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKM 435
+ LAT L+D Y+KCG +D A E+FE K + +NAMI GLA++G GE + F KM
Sbjct: 282 IDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKM 341
Query: 436 PEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMS--FSTSLTLEHYACYIDLLARVGC 493
G++P+ TF+ L CSHSG ++ R +F M + + ++HY C DLL R G
Sbjct: 342 VSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGL 401
Query: 494 IEEAIEVVTSMPFKPNN----FVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVM 549
IEEA E++ MP N W LLGGC +H +E+A++ + R+ + P G Y +
Sbjct: 402 IEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKV 461
Query: 550 LANALASDRQWNDVSALR-LEMREKGIKKQPGSSWI 584
+ A+ +W +V +R + R+K +KK G S +
Sbjct: 462 MVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 161/593 (27%), Positives = 283/593 (47%), Gaps = 23/593 (3%)
Query: 40 GHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPPRIALRVFHYLHNPNIFPFNAIIRV 99
G +HL+ + A+Q N L + A ++F + N+ + A+++
Sbjct: 50 GESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKG 109
Query: 100 LAEQGHVSHVFSLFNDLKHRVLA-PNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLN 158
G V LF + + PN+F + + K C S +Q H K G ++
Sbjct: 110 YQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLIS 169
Query: 159 DPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHM 218
V N LV +Y+ N A +V D++P +++ ++S ++GY + G +E L +
Sbjct: 170 HEFVRNTLVYMYSLCSGNGE-AIRVLDDLP-YCDLSVFSSALSGYLECGAFKEGLDVLRK 227
Query: 219 MVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELID-DSTSNGESCHDSVNTVLVY 277
++ N T +S L S+L + V+ S ++ + E+C L+
Sbjct: 228 TANEDFVWNNLTYLSSLRLFSNLRDLNLALQVH--SRMVRFGFNAEVEAC-----GALIN 280
Query: 278 LFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIM-VKEGTTR 336
++GK G V ++ FD A + + ++ AY QD E L+LF M KE
Sbjct: 281 MYGKCGKVLYAQRVFDDTHA---QNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKE--VP 335
Query: 337 PNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDR 396
PN T +L++ A++ L G +H ++ G++ ++ ++ +L++MY+K G ++
Sbjct: 336 PNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHV----MVGNALVNMYAKSGSIED 391
Query: 397 AKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSH 456
A++ F +D+V +N MI G + +G G +AL F +M G PN TF+G L ACSH
Sbjct: 392 ARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSH 451
Query: 457 SGFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWG 514
GF+E+G F + F ++HY C + LL++ G ++A + + + P + + W
Sbjct: 452 IGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWR 511
Query: 515 ALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKG 574
LL C + L ++V++ +E P SG YV+L+N A R+W V+ +R M +G
Sbjct: 512 TLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRG 571
Query: 575 IKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMKAPSHCQSVS 627
+KK+PG SWI + H FL HP+I IY + + +K + V+
Sbjct: 572 VKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVA 624
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 189/415 (45%), Gaps = 28/415 (6%)
Query: 131 LLKVCFRSKDARCAEQVHAHI---QKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEI 187
LLKVC S R E +HAH+ + D N L+ +Y + R V ARK+FD +
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKC-RETVRARKLFDLM 95
Query: 188 PDRSEVTCWTSLITGYAQSGHGEEVLQLFH-MMVRQNLRPQNDTMVSVLSACSSLEISKI 246
P+R+ V W +++ GY SG EVL+LF M RP V +CS+ +I
Sbjct: 96 PERN-VVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSN--SGRI 152
Query: 247 ERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKW-GNVEKSRERFDRISAAGKRGVVP 305
E F + G H+ V LVY++ GN E R D +
Sbjct: 153 EEGKQFHGCFL----KYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYC----DLSV 204
Query: 306 WNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYL 365
+++ +S Y++ G EGL + R E N++T +S L + + DL+L VH +
Sbjct: 205 FSSALSGYLECGAFKEGLDVLRKTANEDFVW-NNLTYLSSLRLFSNLRDLNLALQVHSRM 263
Query: 366 ISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEG 425
+ G + + +LI+MY KCG++ A+ VF+ ++++ L ++ +
Sbjct: 264 VRFGFNAEVEA----CGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSF 319
Query: 426 EDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERG---RQIFRDMSFSTSLTLEHYA 482
E+AL LF KM + PN TF L++ + L++G + + + + +
Sbjct: 320 EEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGN-- 377
Query: 483 CYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLV 537
+++ A+ G IE+A + + M F+ + W ++ GC H A E R++
Sbjct: 378 ALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHHGLGREALEAFDRMI 431
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 219 bits (557), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 141/445 (31%), Positives = 239/445 (53%), Gaps = 35/445 (7%)
Query: 179 FARKVFD--EIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQ---NLRPQNDT--- 230
+A +FD EIP+ + ++I ++S L+ F +MV++ ++ P T
Sbjct: 65 YASSIFDSIEIPNS---FVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHF 121
Query: 231 -MVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSR 289
+V+ L AC +I WV + D H + +Y+ K + +R
Sbjct: 122 LIVACLKACFFSVGKQIHCWVVKNGVFLSDG-------HVQTGVLRIYVEDKL--LFDAR 172
Query: 290 ERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSAC 349
+ FD I + VV W+ +++ YV+ G EGL +F+ M+ G P+ ++ + L+AC
Sbjct: 173 KVFDEIP---QPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGI-EPDEFSVTTALTAC 228
Query: 350 AQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDV 409
AQ+G L+ GKW+HE+ + K I S+ + T+L+DMY+KCG ++ A EVFE ++V
Sbjct: 229 AQVGALAQGKWIHEF---VKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNV 285
Query: 410 VLFNAMIMGLAVNGEGEDALRLFYKMP-EFGLQPNAGTFLGALSACSHSGFLERGRQIFR 468
+ A+I G A G + A ++ E G++P++ LG L+AC+H GFLE GR +
Sbjct: 286 FSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLE 345
Query: 469 DMSFSTSLTL--EHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRV 526
+M +T EHY+C +DL+ R G +++A++++ MP KP VWGALL GC H V
Sbjct: 346 NMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNV 405
Query: 527 ELAQEVSKRLVEVDP----TSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSS 582
EL + + L++++ V L+N S ++ + +R + ++GI+K PG S
Sbjct: 406 ELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWS 465
Query: 583 WISVDGVVHEFLVGYLSHPQIEGIY 607
+ VDG+V +F+ G +SHP + I+
Sbjct: 466 LLEVDGIVTKFVSGDVSHPNLLQIH 490
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 170/350 (48%), Gaps = 21/350 (6%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAE--QGHVS-HVFSLFNDLKHRVLAPNDFTFSFLLKV 134
A +F + PN F ++ +IR+ + Q H+ F L + + P+ TF FL+
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVA 125
Query: 135 CFRSKDARCAEQVHAHIQKMG-YLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEV 193
C ++ +Q+H + K G +L+D V G++ +Y + + ARKVFDEIP + +V
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVED-KLLFDARKVFDEIP-QPDV 183
Query: 194 TCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFL 253
W L+ GY + G G E L++F M+ + + P ++ + L+AC+ + +W++
Sbjct: 184 VKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIH-- 241
Query: 254 SELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAY 313
E + V T LV ++ K G +E + E F++++ +R V W A+I Y
Sbjct: 242 -EFVKKKRWIESDVF--VGTALVDMYAKCGCIETAVEVFEKLT---RRNVFSWAALIGGY 295
Query: 314 VQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGN 373
G + + + +E +P+ V ++ VL+ACA G L G+ + E ++ +
Sbjct: 296 AAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLE---NMEARYG 352
Query: 374 IGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNG 423
I + ++D+ + GRLD A ++ E K + A + G +NG
Sbjct: 353 ITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPL----ASVWGALLNG 398
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 219 bits (557), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 148/493 (30%), Positives = 249/493 (50%), Gaps = 21/493 (4%)
Query: 108 HVFSLFNDLKHRV-LAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGL 166
F LF L+ R T+ L++ C R K RC ++V+ + G+ + + N +
Sbjct: 105 EAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRI 164
Query: 167 VAVYAR-GFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLR 225
+ ++ + G ++ AR++FDEIP+R+ + + S+I+G+ G+ E +LF MM +
Sbjct: 165 LLMHVKCGM--IIDARRLFDEIPERN-LYSYYSIISGFVNFGNYVEAFELFKMMWEELSD 221
Query: 226 PQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNV 285
+ T +L A + L +Y +L + G + V+ L+ ++ K G++
Sbjct: 222 CETHTFAVMLRASAGLGS------IYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDI 275
Query: 286 EKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSV 345
E +R F+ + ++ V WN +I+ Y G E L L M G + + T+ +
Sbjct: 276 EDARCAFECMP---EKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVS-IDQFTLSIM 331
Query: 346 LSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAV 405
+ ++ L L K H LI G + I +N T+L+D YSK GR+D A+ VF+
Sbjct: 332 IRISTKLAKLELTKQAHASLIRNGFESEIVAN----TALVDFYSKWGRVDTARYVFDKLP 387
Query: 406 SKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQ 465
K+++ +NA++ G A +G G DA++LF KM + PN TFL LSAC++SG E+G +
Sbjct: 388 RKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWE 447
Query: 466 IFRDMSFSTSLTLE--HYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLH 523
IF MS + HYAC I+LL R G ++EAI + P K +W ALL C +
Sbjct: 448 IFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQ 507
Query: 524 SRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSW 583
+EL + V+++L + P G YV++ N S + + + + + KG+ P +W
Sbjct: 508 ENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTW 567
Query: 584 ISVDGVVHEFLVG 596
+ V H FL G
Sbjct: 568 VEVGDQTHSFLSG 580
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 156/336 (46%), Gaps = 21/336 (6%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
A R+F + N++ + +II G+ F LF + + TF+ +L+
Sbjct: 177 ARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAG 236
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWT 197
+Q+H K+G +++ VS GL+ +Y++ ++ AR F+ +P+++ V W
Sbjct: 237 LGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSK-CGDIEDARCAFECMPEKTTVA-WN 294
Query: 198 SLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDT---MVSVLSACSSLEISKIERWVYFLS 254
++I GYA G+ EE L L + M + T M+ + + + LE++K +
Sbjct: 295 NVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAH-----A 349
Query: 255 ELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYV 314
LI NG NT LV + KWG V+ +R FD++ ++ ++ WNA++ Y
Sbjct: 350 SLI----RNGFESEIVANTALVDFYSKWGRVDTARYVFDKLP---RKNIISWNALMGGYA 402
Query: 315 QDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNI 374
G + + LF M+ PNHVT ++VLSACA G LS W E +S+ I
Sbjct: 403 NHGRGTDAVKLFEKMIA-ANVAPNHVTFLAVLSACAYSG-LSEQGW--EIFLSMSEVHGI 458
Query: 375 GSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVV 410
+ +I++ + G LD A A K V
Sbjct: 459 KPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTV 494
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 156/545 (28%), Positives = 263/545 (48%), Gaps = 34/545 (6%)
Query: 48 LQIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQ 103
+ IH Q G D +AT L+ Y IA ++F + + ++ ++A+I +
Sbjct: 320 IAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQA 379
Query: 104 GHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVS 163
G SLF D+ + PN T + +L+ C +R + +H + K ++ +
Sbjct: 380 GQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETA 439
Query: 164 NGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQN 223
++++YA+ R A K F+ +P + V + +L GY Q G + ++ M
Sbjct: 440 TAVISMYAKCGR-FSPALKAFERLPIKDAVA-FNALAQGYTQIGDANKAFDVYKNMKLHG 497
Query: 224 LRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWG 283
+ P + TMV +L C+ S R ++I + CH V L+ +F K
Sbjct: 498 VCPDSRTMVGMLQTCAF--CSDYARGSCVYGQIIKHGFDS--ECH--VAHALINMFTKCD 551
Query: 284 NVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMV 343
+ + FD+ ++ V WN M++ Y+ G E ++ FR M E +PN VT V
Sbjct: 552 ALAAAIVLFDK--CGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVE-KFQPNAVTFV 608
Query: 344 SVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEH 403
+++ A A++ L +G VH LI G S + SL+DMY+KCG ++ +++ F
Sbjct: 609 NIVRAAAELSALRVGMSVHSSLIQCG----FCSQTPVGNSLVDMYAKCGMIESSEKCFIE 664
Query: 404 AVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERG 463
+K +V +N M+ A +G A+ LF M E L+P++ +FL LSAC H+G +E G
Sbjct: 665 ISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEG 724
Query: 464 RQIFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCL 521
++IF +M +EHYAC +DLL + G EA+E++ M K + VWGALL
Sbjct: 725 KRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSR 784
Query: 522 LHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGS 581
+H + L+ +LV+++P + Y + DR+ +V+ + IKK P
Sbjct: 785 MHCNLWLSNAALCQLVKLEPLNPSHY-------SQDRRLGEVNNV------SRIKKVPAC 831
Query: 582 SWISV 586
SWI V
Sbjct: 832 SWIEV 836
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 228/484 (47%), Gaps = 27/484 (5%)
Query: 31 PTTFTNLLQGHIPRSH---LLQIHARIFQLGAHQDNLLATRLIGHYPPRIALRVFHYLHN 87
P +TNLL + LLQ+H + G N L ++ +F + +
Sbjct: 2 PINYTNLLLMLRECKNFRCLLQVHGSLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRD 61
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDL-KHRVLAPNDFTFSFLLKVCFRSKDARCAEQ 146
P + +N++IR G F + + + + P+ ++F+F LK C S D + +
Sbjct: 62 PGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLR 121
Query: 147 VHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQS 206
+H I +MG +D + LV +Y + R++V AR+VFD++ + VT W ++++G AQ+
Sbjct: 122 IHDLIAEMGLESDVYIGTALVEMYCKA-RDLVSARQVFDKMHVKDVVT-WNTMVSGLAQN 179
Query: 207 GHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVY--FLSELIDDSTSNG 264
G L LFH M + + ++ +++ A S LE S + R ++ + + + S+G
Sbjct: 180 GCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSG 239
Query: 265 ESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLS 324
L+ ++ ++ + F+ + ++ W M++AY +G E L
Sbjct: 240 ----------LIDMYCNCADLYAAESVFEEV---WRKDESSWGTMMAAYAHNGFFEEVLE 286
Query: 325 LFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSL 384
LF +M + R N V S L A A +GDL G +H+Y + G G++ +ATSL
Sbjct: 287 LFDLM-RNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVS----VATSL 341
Query: 385 IDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNA 444
+ MYSKCG L+ A+++F + +DVV ++AMI G+ ++A+ LF M ++PNA
Sbjct: 342 MSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNA 401
Query: 445 GTFLGALSACSHSGFLERGRQIF-RDMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTS 503
T L C+ G+ I + LE I + A+ G A++
Sbjct: 402 VTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFER 461
Query: 504 MPFK 507
+P K
Sbjct: 462 LPIK 465
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 117/455 (25%), Positives = 197/455 (43%), Gaps = 60/455 (13%)
Query: 126 FTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFD 185
++ LL + K+ RC QVH + G P N L+ Y+ F+ +R +FD
Sbjct: 3 INYTNLLLMLRECKNFRCLLQVHGSLIVSGL--KPH--NQLINAYSL-FQRQDLSRVIFD 57
Query: 186 EIPDRSEVTCWTSLITGYAQSGHGEEVLQLF-HMMVRQNLRPQNDTMVSVLSACS-SLEI 243
+ D V W S+I GY ++G E L F +M + + P + L AC+ S++
Sbjct: 58 SVRDPG-VVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDF 116
Query: 244 SKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGV 303
K R ++E+ G + T LV ++ K ++ +R+ FD++ + V
Sbjct: 117 KKGLRIHDLIAEM-------GLESDVYIGTALVEMYCKARDLVSARQVFDKMHV---KDV 166
Query: 304 VPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHE 363
V WN M+S Q+GC L LF M + +HV++ +++ A +++ + + +H
Sbjct: 167 VTWNTMVSGLAQNGCSSAALLLFHDM-RSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHG 225
Query: 364 YLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNG 423
+I KG I + ++ LIDMY C L A+ VFE KD + M+ A NG
Sbjct: 226 LVIK---KGFIFA---FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNG 279
Query: 424 EGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERG---------RQIFRDMSFST 474
E+ L LF M + ++ N AL A ++ G L +G + + D+S +T
Sbjct: 280 FFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVAT 339
Query: 475 SLTLEHYAC---------YIDLLAR--------------VGCIEEAIEVVTSMP---FKP 508
SL + C +I++ R G +EAI + M KP
Sbjct: 340 SLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKP 399
Query: 509 NNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTS 543
N ++L GC + L + + ++ D S
Sbjct: 400 NAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIES 434
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 165/590 (27%), Positives = 266/590 (45%), Gaps = 72/590 (12%)
Query: 34 FTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHY--------PPRIALRVFHYL 85
F +L+ + L +HA+I + G +L++R+ P +L +F
Sbjct: 32 FISLIHACKDTASLRHVHAQILRRG-----VLSSRVAAQLVSCSSLLKSPDYSLSIFRNS 86
Query: 86 HNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAE 145
N F NA+IR L E F + + P+ TF F+LK +
Sbjct: 87 EERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGR 146
Query: 146 QVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDR---SEVTCWTSLITG 202
+HA K D V LV +YA+ + + A +VF+E PDR + W LI G
Sbjct: 147 ALHAATLKNFVDCDSFVRLSLVDMYAKTGQ-LKHAFQVFEESPDRIKKESILIWNVLING 205
Query: 203 YAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTS 262
Y ++ LF M +N W + +D
Sbjct: 206 YCRAKDMHMATTLFRSMPERNSGS----------------------WSTLIKGYVDS--- 240
Query: 263 NGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEG 322
G + ++++ F+ + ++ VV W +I+ + Q G
Sbjct: 241 --------------------GELNRAKQLFELMP---EKNVVSWTTLINGFSQTGDYETA 277
Query: 323 LSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILAT 382
+S + M+++G +PN T+ +VLSAC++ G L G +H Y++ G I ++ + T
Sbjct: 278 ISTYFEMLEKGL-KPNEYTIAAVLSACSKSGALGSGIRIHGYILDNG----IKLDRAIGT 332
Query: 383 SLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQP 442
+L+DMY+KCG LD A VF + KD++ + AMI G AV+G A++ F +M G +P
Sbjct: 333 ALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKP 392
Query: 443 NAGTFLGALSACSHSGFLERGRQIFRDMSFSTSL--TLEHYACYIDLLARVGCIEEAIEV 500
+ FL L+AC +S ++ G F M ++ TL+HY +DLL R G + EA E+
Sbjct: 393 DEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHEL 452
Query: 501 VTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQW 560
V +MP P+ W AL C H A+ VS+ L+E+DP G Y+ L AS
Sbjct: 453 VENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNI 512
Query: 561 NDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTL 610
DV RL ++++ ++ G S+I +DG +++F G SH + I L L
Sbjct: 513 QDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKL 562
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 148/491 (30%), Positives = 249/491 (50%), Gaps = 35/491 (7%)
Query: 131 LLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLV---AVYARGFRNVVFARKVFDEI 187
+L+ C K R ++H+H+ G + PS+ N L+ AV G ++ A+ +FD
Sbjct: 11 MLQGCNSMKKLR---KIHSHVIINGLQHHPSIFNHLLRFCAVSVTG--SLSHAQLLFDHF 65
Query: 188 PDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNL-RPQNDTMVSVLSACSSLEISKI 246
+ W LI G++ S + ++ M+ ++ RP T L +C I I
Sbjct: 66 DSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCE--RIKSI 123
Query: 247 ERWV-----YFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKR 301
+ + S +DD+ V T LV + G+VE + + FD + R
Sbjct: 124 PKCLEIHGSVIRSGFLDDAI---------VATSLVRCYSANGSVEIASKVFDEMPV---R 171
Query: 302 GVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWV 361
+V WN MI + G + LS+++ M EG ++ T+V++LS+CA + L++G +
Sbjct: 172 DLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSY-TLVALLSSCAHVSALNMGVML 230
Query: 362 HEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAV 421
H I S ++ +LIDMY+KCG L+ A VF +DV+ +N+MI+G V
Sbjct: 231 HRIACDI----RCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGV 286
Query: 422 NGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLT--LE 479
+G G +A+ F KM G++PNA TFLG L CSH G ++ G + F MS LT ++
Sbjct: 287 HGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVK 346
Query: 480 HYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEV 539
HY C +DL R G +E ++E++ + + +W LLG C +H +EL + K+LV++
Sbjct: 347 HYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQL 406
Query: 540 DPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLS 599
+ ++G YV++ + ++ +++R +R ++ PG SWI + VH+F+V
Sbjct: 407 EAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKM 466
Query: 600 HPQIEGIYLTL 610
HP+ IY L
Sbjct: 467 HPESAVIYSEL 477
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 180/371 (48%), Gaps = 24/371 (6%)
Query: 83 HYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFND-LKHRVLAPNDFTFSFLLKVCFRSKDA 141
H+ +P+ +N +IR + + +N L V P+ FTF+F LK C R K
Sbjct: 64 HFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSI 123
Query: 142 RCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLIT 201
++H + + G+L+D V+ LV Y+ +V A KVFDE+P R V+ W +I
Sbjct: 124 PKCLEIHGSVIRSGFLDDAIVATSLVRCYSAN-GSVEIASKVFDEMPVRDLVS-WNVMIC 181
Query: 202 GYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDST 261
++ G + L ++ M + + + T+V++LS+C+ +S + V D
Sbjct: 182 CFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCA--HVSALNMGVMLHRIACDIRC 239
Query: 262 SNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVE 321
ESC V+ L+ ++ K G++E + F+ + KR V+ WN+MI Y G VE
Sbjct: 240 ---ESC-VFVSNALIDMYAKCGSLENAIGVFNGMR---KRDVLTWNSMIIGYGVHGHGVE 292
Query: 322 GLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILA 381
+S FR MV G RPN +T + +L C+ G + G E + S H + N
Sbjct: 293 AISFFRKMVASG-VRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFH---LTPNVKHY 348
Query: 382 TSLIDMYSKCGRLDRAKE-VFEHAVSKDVVLFNAMIMGLAVNGE---GEDALRLFYKMPE 437
++D+Y + G+L+ + E ++ + +D VL+ ++ ++ GE A++ ++
Sbjct: 349 GCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEA 408
Query: 438 FGLQPNAGTFL 448
F NAG ++
Sbjct: 409 F----NAGDYV 415
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 119/324 (36%), Positives = 180/324 (55%), Gaps = 17/324 (5%)
Query: 268 HDS-VNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQD---GCPVEGL 323
HD V LV + G + ++R F+RI + + WN +++AY E L
Sbjct: 148 HDRFVQAALVGFYANCGKLREARSLFERIR---EPDLATWNTLLAAYANSEEIDSDEEVL 204
Query: 324 SLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATS 383
LF M RPN +++V+++ +CA +G+ G W H Y++ K N+ NQ + TS
Sbjct: 205 LLFMRM----QVRPNELSLVALIKSCANLGEFVRGVWAHVYVL----KNNLTLNQFVGTS 256
Query: 384 LIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPN 443
LID+YSKCG L A++VF+ +DV +NAMI GLAV+G G++ + L+ + GL P+
Sbjct: 257 LIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPD 316
Query: 444 AGTFLGALSACSHSGFLERGRQIFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVV 501
+ TF+ +SACSHSG ++ G QIF M + +EHY C +DLL R G +EEA E +
Sbjct: 317 SATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECI 376
Query: 502 TSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWN 561
MP KPN +W + LG H E + K L+ ++ +SG YV+L+N A +W
Sbjct: 377 KKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWT 436
Query: 562 DVSALRLEMREKGIKKQPGSSWIS 585
DV R M++ + K PG S ++
Sbjct: 437 DVEKTRELMKDHRVNKSPGISTLN 460
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 138/323 (42%), Gaps = 34/323 (10%)
Query: 48 LQIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQ 103
L H F + D + L+G Y R A +F + P++ +N ++ A
Sbjct: 135 LHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANS 194
Query: 104 GHVS---HVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDP 160
+ V LF ++ R PN+ + L+K C + H ++ K +
Sbjct: 195 EEIDSDEEVLLLFMRMQVR---PNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQ 251
Query: 161 SVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMV 220
V L+ +Y++ + FARKVFDE+ R +V+C+ ++I G A G G+E ++L+ ++
Sbjct: 252 FVGTSLIDLYSKC-GCLSFARKVFDEMSQR-DVSCYNAMIRGLAVHGFGQEGIELYKSLI 309
Query: 221 RQNLRPQNDTMVSVLSACS-------SLEISKIERWVYFLSELIDDSTSNGESCHDSVNT 273
Q L P + T V +SACS L+I + VY + ++
Sbjct: 310 SQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHY------------G 357
Query: 274 VLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEG-LSLFRIMVKE 332
LV L G+ G +E++ E ++ K W + + + G G ++L ++ E
Sbjct: 358 CLVDLLGRSGRLEEAEECIKKMPV--KPNATLWRSFLGSSQTHGDFERGEIALKHLLGLE 415
Query: 333 GTTRPNHVTMVSVLSACAQIGDL 355
N+V + ++ + + D+
Sbjct: 416 FENSGNYVLLSNIYAGVNRWTDV 438
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 112/248 (45%), Gaps = 22/248 (8%)
Query: 303 VVPWNAMISAYVQDGCPVE---GLSLFRIMV--KEGTTRPNHVTMVSVLSACAQIGDLSL 357
V +N +IS+ V + + SL+ ++ + RPN T S+ A
Sbjct: 71 VFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHR 130
Query: 358 -GKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMI 416
G+ +H +++ + ++ + +L+ Y+ CG+L A+ +FE D+ +N ++
Sbjct: 131 HGRALHAHVLKFLEP--VNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLL 188
Query: 417 MGLAVNGE---GEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERG--RQIFRDMS 471
A + E E+ L LF +M ++PN + + + +C++ G RG ++
Sbjct: 189 AAYANSEEIDSDEEVLLLFMRMQ---VRPNELSLVALIKSCANLGEFVRGVWAHVY---V 242
Query: 472 FSTSLTLEHY--ACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELA 529
+LTL + IDL ++ GC+ A +V M + + + A++ G +H +
Sbjct: 243 LKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMS-QRDVSCYNAMIRGLAVHGFGQEG 301
Query: 530 QEVSKRLV 537
E+ K L+
Sbjct: 302 IELYKSLI 309
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 180/600 (30%), Positives = 286/600 (47%), Gaps = 56/600 (9%)
Query: 26 IVDHTPTTFT--NLLQGHIPRSHLLQ---IHARIFQLGAHQDNLLATRLIGHYPP----R 76
I+ H+P FT LL+ ++Q +HA++ + G D AT L+ Y
Sbjct: 24 ILSHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVT 83
Query: 77 IALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCF 136
AL+V + I NA + L E G F +F D + N T + +L C
Sbjct: 84 DALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC- 142
Query: 137 RSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCW 196
D Q+H K G+ + V LV++Y+R V+ AR +F+++P +S VT +
Sbjct: 143 --GDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAAR-MFEKVPHKSVVT-Y 198
Query: 197 TSLITGYAQSGHGEEVLQLFHMMVRQNLRPQND-TMVSVLSACSSLEISKIERWVYFL-- 253
+ I+G ++G V +F++M + + ND T V+ ++AC+SL + R ++ L
Sbjct: 199 NAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVM 258
Query: 254 -----------SELIDDSTSNGESCHDSVNTVLVYL-----FGKWGNV----------EK 287
+ LID + C S V L W +V E
Sbjct: 259 KKEFQFETMVGTALIDMYSKC--RCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHET 316
Query: 288 SRERFDRISAAG-KRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVL 346
+ E F+++ + G K WN++IS + Q G +E F M+ P+ + S+L
Sbjct: 317 AVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSV-VMVPSLKCLTSLL 375
Query: 347 SACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFE--HA 404
SAC+ I L GK +H ++I + +I + TSLIDMY KCG A+ +F+
Sbjct: 376 SACSDIWTLKNGKEIHGHVIKAAAERDI----FVLTSLIDMYMKCGLSSWARRIFDRFEP 431
Query: 405 VSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGR 464
KD V +N MI G +GE E A+ +F + E ++P+ TF LSACSH G +E+G
Sbjct: 432 KPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGS 491
Query: 465 QIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLL 522
QIFR M + + EH C IDLL R G + EA EV+ M ++ +LLG C
Sbjct: 492 QIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQ 550
Query: 523 HSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSS 582
H L +E + +L E++P + +V+L++ A+ +W DV ++R + +K + K PG S
Sbjct: 551 HLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 142/425 (33%), Positives = 235/425 (55%), Gaps = 17/425 (4%)
Query: 162 VSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVR 221
+S+ LV Y++ + VF +P R+ + W +I +++SG + + LF M R
Sbjct: 68 LSSKLVLAYSKLNHLFPTSLSVFWHMPYRN-IFSWNIIIGEFSRSGFASKSIDLFLRMWR 126
Query: 222 QN-LRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFG 280
++ +RP + T+ +L ACS+ +K ++ L + S+S V++ LV ++
Sbjct: 127 ESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSL------FVSSALVIMYV 180
Query: 281 KWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHV 340
G + +R+ FD + R V + AM YVQ G + GL++FR M G + V
Sbjct: 181 DMGKLLHARKLFDDMPV---RDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFAL-DSV 236
Query: 341 TMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEV 400
MVS+L AC Q+G L GK VH + I +G N L ++ DMY KC LD A V
Sbjct: 237 VMVSLLMACGQLGALKHGKSVHGWCIR--RCSCLGLN--LGNAITDMYVKCSILDYAHTV 292
Query: 401 FEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFL 460
F + +DV+ ++++I+G ++G+ + +LF +M + G++PNA TFLG LSAC+H G +
Sbjct: 293 FVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLV 352
Query: 461 ERGRQIFRDM-SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGG 519
E+ FR M ++ L+HYA D ++R G +EEA + + MP KP+ V GA+L G
Sbjct: 353 EKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSG 412
Query: 520 CLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQP 579
C ++ VE+ + V++ L+++ P + YV LA ++ ++++ +LR M+EK I K P
Sbjct: 413 CKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVP 472
Query: 580 GSSWI 584
G S I
Sbjct: 473 GCSSI 477
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 195/425 (45%), Gaps = 29/425 (6%)
Query: 60 HQDNLLATRLIGHYPPR-----IALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFN 114
+ + +L+++L+ Y +L VF ++ NIF +N II + G S LF
Sbjct: 63 YSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFL 122
Query: 115 DL-KHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARG 173
+ + + P+DFT +L+ C S++A+ + +H K+G+ + VS+ LV +Y
Sbjct: 123 RMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYV-D 181
Query: 174 FRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVS 233
++ ARK+FD++P R V +T++ GY Q G L +F M + MVS
Sbjct: 182 MGKLLHARKLFDDMPVRDSVL-YTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVS 240
Query: 234 VLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFD 293
+L AC L K + V+ I + G + +++ + V K ++ + F
Sbjct: 241 LLMACGQLGALKHGKSVH--GWCIRRCSCLGLNLGNAITDMYV----KCSILDYAHTVFV 294
Query: 294 RISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIG 353
+S +R V+ W+++I Y DG V LF M+KEG PN VT + VLSACA G
Sbjct: 295 NMS---RRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEG-IEPNAVTFLGVLSACAH-G 349
Query: 354 DLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEH-AVSKDVVLF 412
L W++ L+ + NI S+ D S+ G L+ A++ E V D +
Sbjct: 350 GLVEKSWLYFRLM---QEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVM 406
Query: 413 NAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAG----TFLGALSACSHSGFLERGRQIFR 468
A++ G V G E R+ ++ + L+P T G SA E RQ +
Sbjct: 407 GAVLSGCKVYGNVEVGERVARELIQ--LKPRKASYYVTLAGLYSAAGRFDEAESLRQWMK 464
Query: 469 DMSFS 473
+ S
Sbjct: 465 EKQIS 469
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 149/499 (29%), Positives = 246/499 (49%), Gaps = 28/499 (5%)
Query: 92 PFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHI 151
FN +I LA + +F + L P D TF ++ C A QVH
Sbjct: 259 TFNVVIDGLAGFKRDESLL-VFRKMLEASLRPTDLTFVSVMGSC---SCAAMGHQVHGLA 314
Query: 152 QKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEE 211
K GY VSN + +Y+ F + A KVF+ + ++ VT W ++I+ Y Q+ G+
Sbjct: 315 IKTGYEKYTLVSNATMTMYS-SFEDFGAAHKVFESLEEKDLVT-WNTMISSYNQAKLGKS 372
Query: 212 VLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSV 271
+ ++ M ++P T S+L+ +SL++ +E + + G S +
Sbjct: 373 AMSVYKRMHIIGVKPDEFTFGSLLA--TSLDLDVLEMVQACIIKF-------GLSSKIEI 423
Query: 272 NTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVK 331
+ L+ + K G +EK+ F+R + ++ ++ WNA+IS + +G P EGL F +++
Sbjct: 424 SNALISAYSKNGQIEKADLLFER---SLRKNLISWNAIISGFYHNGFPFEGLERFSCLLE 480
Query: 332 -EGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSK 390
E P+ T+ ++LS C L LG H Y++ G ++ +LI+MYS+
Sbjct: 481 SEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQ----FKETLIGNALINMYSQ 536
Query: 391 CGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFG-LQPNAGTFLG 449
CG + + EVF KDVV +N++I + +GEGE+A+ + M + G + P+A TF
Sbjct: 537 CGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSA 596
Query: 450 ALSACSHSGFLERGRQIFRDM-SFSTSL-TLEHYACYIDLLARVGCIEEAIEVV--TSMP 505
LSACSH+G +E G +IF M F + ++H++C +DLL R G ++EA +V +
Sbjct: 597 VLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKT 656
Query: 506 FKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSA 565
VW AL C H ++L + V+K L+E + YV L+N A W +
Sbjct: 657 IGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEE 716
Query: 566 LRLEMREKGIKKQPGSSWI 584
R + G KQ G SW+
Sbjct: 717 TRRAINMIGAMKQRGCSWM 735
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 119/501 (23%), Positives = 210/501 (41%), Gaps = 90/501 (17%)
Query: 86 HNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHR--VLAPNDFTFSFLLKVCFRSKDARC 143
++ + N + L G + LF D+ HR L P+ ++ S + +D
Sbjct: 17 NSTTLLNLNRRLTGLTRSGENRNALKLFADV-HRCTTLRPDQYSVSLAITTARHLRDTIF 75
Query: 144 AEQVHAHIQKMGYLNDPSVSNGLVAVYAR----------------------------GFR 175
QVH + + G L VSN L+++Y R F+
Sbjct: 76 GGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFK 135
Query: 176 --NVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVS 233
++ +A +VFD++P+R +V W ++ITG +SG+ E ++LF M + +R +
Sbjct: 136 LGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFAT 195
Query: 234 VLSACS--SLEISK------IERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNV 285
+LS C SL+ K I+ + S +++ + +C V+ LV+
Sbjct: 196 ILSMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVF-------- 247
Query: 286 EKSRERFDRISAAGKRGVVPWNAMI---SAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTM 342
E D R V +N +I + + +D E L +FR M+ E + RP +T
Sbjct: 248 ----EETD----VAVRDQVTFNVVIDGLAGFKRD----ESLLVFRKML-EASLRPTDLTF 294
Query: 343 VSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFE 402
VSV+ +C+ ++G VH I G++ +++ + + MYS A +VFE
Sbjct: 295 VSVMGSCSCA---AMGHQVHGLAIKTGYE----KYTLVSNATMTMYSSFEDFGAAHKVFE 347
Query: 403 HAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLER 462
KD+V +N MI G+ A+ ++ +M G++P+ TF L+ LE
Sbjct: 348 SLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEM 407
Query: 463 GRQIFRDMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGG--- 519
+ + F S +E I ++ G IE+A +++ + N W A++ G
Sbjct: 408 VQACI--IKFGLSSKIEISNALISAYSKNGQIEKA-DLLFERSLRKNLISWNAIISGFYH 464
Query: 520 ------------CLLHSRVEL 528
CLL S V +
Sbjct: 465 NGFPFEGLERFSCLLESEVRI 485
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 117/309 (37%), Positives = 170/309 (55%), Gaps = 7/309 (2%)
Query: 301 RGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKW 360
R ++PWNAMIS YVQ G EGL ++ M ++ P+ T SV AC+ + L GK
Sbjct: 172 RDLIPWNAMISGYVQKGLEQEGLFIYYDM-RQNRIVPDQYTFASVFRACSALDRLEHGKR 230
Query: 361 VHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLA 420
H +I K I SN I+ ++L+DMY KC VF+ +++V+ + ++I G
Sbjct: 231 AHAVMI----KRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYG 286
Query: 421 VNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLE- 479
+G+ + L+ F KM E G +PN TFL L+AC+H G +++G + F M + E
Sbjct: 287 YHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEG 346
Query: 480 -HYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVE 538
HYA +D L R G ++EA E V P K + VWG+LLG C +H V+L + + + +E
Sbjct: 347 QHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLE 406
Query: 539 VDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYL 598
+DPT+ G YV+ AN AS S +R +M G+KK PG S I + G VH F+
Sbjct: 407 LDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDT 466
Query: 599 SHPQIEGIY 607
SH E IY
Sbjct: 467 SHRLSEKIY 475
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 13/218 (5%)
Query: 31 PTTFTNLLQGHIPRSHLLQ---IHARIFQLGAHQDNLLATRLIGHYPPRIALR----VFH 83
P T+ LLQ R + IHA++F +G + L +L+ Y L+ +F
Sbjct: 108 PETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFR 167
Query: 84 YLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARC 143
L ++ P+NA+I ++G ++ D++ + P+ +TF+ + + C
Sbjct: 168 SLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEH 227
Query: 144 AEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFA--RKVFDEIPDRSEVTCWTSLIT 201
++ HA + K ++ V + LV +Y F+ F+ +VFD++ R+ +T WTSLI+
Sbjct: 228 GKRAHAVMIKRCIKSNIIVDSALVDMY---FKCSSFSDGHRVFDQLSTRNVIT-WTSLIS 283
Query: 202 GYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACS 239
GY G EVL+ F M + RP T + VL+AC+
Sbjct: 284 GYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACN 321
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 212 bits (540), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 195/350 (55%), Gaps = 10/350 (2%)
Query: 271 VNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMV 330
+ + LV L+ G VE + + F+ + +R VV W AMIS + Q+ L L+ M
Sbjct: 157 LGSSLVVLYRDSGEVENAYKVFEEMP---ERNVVSWTAMISGFAQEWRVDICLKLYSKM- 212
Query: 331 KEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSK 390
++ T+ PN T ++LSAC G L G+ VH + +G K + ++ SLI MY K
Sbjct: 213 RKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLH----ISNSLISMYCK 268
Query: 391 CGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLF-YKMPEFGLQPNAGTFLG 449
CG L A +F+ +KDVV +N+MI G A +G A+ LF MP+ G +P+A T+LG
Sbjct: 269 CGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLG 328
Query: 450 ALSACSHSGFLERGRQIFRDMS-FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKP 508
LS+C H+G ++ GR+ F M+ L HY+C +DLL R G ++EA+E++ +MP KP
Sbjct: 329 VLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKP 388
Query: 509 NNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRL 568
N+ +WG+LL C +H V ++ + ++P + +V LAN AS W + + +R
Sbjct: 389 NSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRK 448
Query: 569 EMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMK 618
M++KG+K PG SWI ++ V F S+ ++ I L L HM+
Sbjct: 449 LMKDKGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVLHCLIDHME 498
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 154/306 (50%), Gaps = 16/306 (5%)
Query: 126 FTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFD 185
+ S ++ C ++D R H K G+++D + + LV +Y R V A KVF+
Sbjct: 121 YGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLY-RDSGEVENAYKVFE 179
Query: 186 EIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISK 245
E+P+R+ V+ WT++I+G+AQ + L+L+ M + P + T ++LSAC+
Sbjct: 180 EMPERNVVS-WTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 246 IERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVP 305
R V+ + G + ++ L+ ++ K G+++ + FD+ S + VV
Sbjct: 239 QGRSVHC------QTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS---NKDVVS 289
Query: 306 WNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYL 365
WN+MI+ Y Q G ++ + LF +M+ + T+P+ +T + VLS+C G + G+ +
Sbjct: 290 WNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLM 349
Query: 366 ISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSK-DVVLFNAMIMGLAVNGE 424
G K + + L+D+ + G L A E+ E+ K + V++ +++ V+G+
Sbjct: 350 AEHGLKPELNH----YSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGD 405
Query: 425 GEDALR 430
+R
Sbjct: 406 VWTGIR 411
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 143/315 (45%), Gaps = 19/315 (6%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
A +VF + N+ + A+I A++ V L++ ++ PND+TF+ LL C
Sbjct: 174 AYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTG 233
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWT 197
S VH MG + +SN L+++Y + ++ A ++FD+ ++ +V W
Sbjct: 234 SGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCK-CGDLKDAFRIFDQFSNK-DVVSWN 291
Query: 198 SLITGYAQSGHGEEVLQLFH-MMVRQNLRPQNDTMVSVLSACSSLEISKIERWVY-FLSE 255
S+I GYAQ G + ++LF MM + +P T + VLS+C + K R + ++E
Sbjct: 292 SMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAE 351
Query: 256 LIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQ 315
N SC LV L G++G ++++ E + + K V W +++ +
Sbjct: 352 HGLKPELNHYSC-------LVDLLGRFGLLQEALELIENMPM--KPNSVIWGSLLFSCRV 402
Query: 316 DGCPVEGLSLF--RIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGN 373
G G+ R+M+ E HV + ++ A +G V + + G K N
Sbjct: 403 HGDVWTGIRAAEERLML-EPDCAATHVQLANLY---ASVGYWKEAATVRKLMKDKGLKTN 458
Query: 374 IGSNQILATSLIDMY 388
G + I + + M+
Sbjct: 459 PGCSWIEINNYVFMF 473
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 6/183 (3%)
Query: 342 MVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVF 401
+ S + +C D G H + KG S+ L +SL+ +Y G ++ A +VF
Sbjct: 123 LSSAVRSCGLNRDFRTGSGFH----CLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 402 EHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLE 461
E ++VV + AMI G A + L+L+ KM + PN TF LSAC+ SG L
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 462 RGRQIF-RDMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGC 520
+GR + + + L I + + G +++A + K + W +++ G
Sbjct: 239 QGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNK-DVVSWNSMIAGY 297
Query: 521 LLH 523
H
Sbjct: 298 AQH 300
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 165/561 (29%), Positives = 276/561 (49%), Gaps = 34/561 (6%)
Query: 34 FTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPPRIAL----RVFHYLHNPN 89
FT +Q R + ++H+ + + +D AT+L Y L ++F +
Sbjct: 14 FTRKIQ---TRLNTQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERS 70
Query: 90 IFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLK---VCFRSKDARCAEQ 146
+F +N+IIR A+ + V SLF+ + P++FT++ L + F +K RC
Sbjct: 71 VFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHG 130
Query: 147 VHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQS 206
+ A + +G+ D + +V Y++ +V A K+F IPD ++ W +I GY
Sbjct: 131 I-AIVSGLGF--DQICGSAIVKAYSKAGL-IVEASKLFCSIPD-PDLALWNVMILGYGCC 185
Query: 207 GHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVY-FLSELIDDSTSNGE 265
G ++ + LF++M + +P TMV++ S + + V+ F ++ DS
Sbjct: 186 GFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDS----- 240
Query: 266 SCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSL 325
H V LV ++ + + + F+ IS + +V +++I+ Y + G E L L
Sbjct: 241 --HSYVGCALVNMYSRCMCIASACSVFNSIS---EPDLVACSSLITGYSRCGNHKEALHL 295
Query: 326 FRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLI 385
F + G +P+ V + VL +CA++ D GK VH Y+I +G + +I + ++LI
Sbjct: 296 FAELRMSGK-KPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIK----VCSALI 350
Query: 386 DMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAG 445
DMYSKCG L A +F K++V FN++I+GL ++G A F ++ E GL P+
Sbjct: 351 DMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEI 410
Query: 446 TFLGALSACSHSGFLERGRQIFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTS 503
TF L C HSG L +G++IF M F EHY + L+ G +EEA E V S
Sbjct: 411 TFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMS 470
Query: 504 MPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGY-VMLANALASDRQWND 562
+ ++ + GALL C +H LA+ V++ + + Y VML+N A +W++
Sbjct: 471 LQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDE 530
Query: 563 VSALRLEMREKGIKKQPGSSW 583
V LR + E K PG SW
Sbjct: 531 VERLRDGISESYGGKLPGISW 551
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 153/627 (24%), Positives = 285/627 (45%), Gaps = 58/627 (9%)
Query: 26 IVDHTPTTFTNLLQGHIPRSHL---LQIHARIFQLGAHQDNLLATRLIGHYPPRIA---- 78
+V TF +L + S +QIH I + G ++ L+ Y
Sbjct: 176 LVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCD 235
Query: 79 --LRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRV--LAPNDFTFSFLLKV 134
L++F + ++ +N ++ L ++G F LF ++ +RV + FT S LL
Sbjct: 236 DVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEM-NRVEGFGVDSFTLSTLLSS 294
Query: 135 CFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYAR---------------------- 172
C S ++H ++G + + SV+N L+ Y++
Sbjct: 295 CTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTF 354
Query: 173 --------GFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNL 224
F V A ++F + +++ +T + +L+ G+ ++GHG + L+LF M+++ +
Sbjct: 355 TEMITAYMSFGMVDSAVEIFANVTEKNTIT-YNALMAGFCRNGHGLKALKLFTDMLQRGV 413
Query: 225 RPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGN 284
+ ++ S + AC + K+ ++ G + + + T L+ + +
Sbjct: 414 ELTDFSLTSAVDACGLVSEKKVSEQIHGFC------IKFGTAFNPCIQTALLDMCTRCER 467
Query: 285 VEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVS 344
+ + E FD+ + ++I Y ++G P + +SLF + E + V++
Sbjct: 468 MADAEEMFDQWPSNLDSSKAT-TSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTL 526
Query: 345 VLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHA 404
+L+ C +G +G +H Y + G+ +I L SLI MY+KC D A ++F
Sbjct: 527 ILAVCGTLGFREMGYQIHCYALKAGYFSDIS----LGNSLISMYAKCCDSDDAIKIFNTM 582
Query: 405 VSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSA--CSHSGFLER 462
DV+ +N++I + G++AL L+ +M E ++P+ T +SA + S L
Sbjct: 583 REHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSS 642
Query: 463 GRQIFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGC 520
R +F M + T EHY ++ +L G +EEA + + SMP +P V ALL C
Sbjct: 643 CRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSC 702
Query: 521 LLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPG 580
+HS +A+ V+K ++ P + Y++ +N ++ W+ +R EMRE+G +K P
Sbjct: 703 RIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPA 762
Query: 581 SSWISVDGVVHEFLVGYLSHPQIEGIY 607
SWI + +H F SHPQ + IY
Sbjct: 763 KSWIIHENKIHSFHARDTSHPQEKDIY 789
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 127/533 (23%), Positives = 238/533 (44%), Gaps = 63/533 (11%)
Query: 50 IHARIFQLGAHQDNLLATRLIGHYP----PRIALRVFHYLHNPNIFPFNAIIRVLAEQG- 104
+HA +L + L LI Y PR A+ VF L +P + + A+I +
Sbjct: 102 VHASFLKL-REEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNL 160
Query: 105 HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSN 164
+ + F K ++ PN++TF +L C R Q+H I K G+LN VSN
Sbjct: 161 EIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSN 220
Query: 165 GLVAVYARGF-RNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVR-Q 222
L+++Y + + K+FDEIP R +V W ++++ + G + LF+ M R +
Sbjct: 221 SLMSLYDKDSGSSCDDVLKLFDEIPQR-DVASWNTVVSSLVKEGKSHKAFDLFYEMNRVE 279
Query: 223 NLRPQNDTMVSVLSACSS--------------------LEISKIERWVYFLSELID---- 258
+ T+ ++LS+C+ E+S + F S+ D
Sbjct: 280 GFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKV 339
Query: 259 DSTSNGESCHDSVN-TVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDG 317
+S D+V T ++ + +G V+ + E F ++ ++ + +NA+++ + ++G
Sbjct: 340 ESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVT---EKNTITYNALMAGFCRNG 396
Query: 318 CPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSN 377
++ L LF M++ G + ++ S + AC + + + + +H + I G N
Sbjct: 397 HGLKALKLFTDMLQRGVELTD-FSLTSAVDACGLVSEKKVSEQIHGFCIKFG----TAFN 451
Query: 378 QILATSLIDMYSKCGRLDRAKEVFEHAVSK--DVVLFNAMIMGLAVNGEGEDALRLFYK- 434
+ T+L+DM ++C R+ A+E+F+ S ++I G A NG + A+ LF++
Sbjct: 452 PCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRT 511
Query: 435 MPEFGLQPNAGTFLGALSACSHSGFLERGRQI---------FRDMSFSTSLTLEHYACYI 485
+ E L + + L+ C GF E G QI F D+S SL I
Sbjct: 512 LCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSL--------I 563
Query: 486 DLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVE 538
+ A+ ++AI++ +M + + W +L+ +L + A + R+ E
Sbjct: 564 SMYAKCCDSDDAIKIFNTMR-EHDVISWNSLISCYILQRNGDEALALWSRMNE 615
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 155/357 (43%), Gaps = 42/357 (11%)
Query: 128 FSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYAR-GF-RNVVFARKVFD 185
F +LL++ + D + VHA K+ + N L++ Y + GF R + VF
Sbjct: 83 FFYLLRLSAQYHDVEVTKAVHASFLKLRE-EKTRLGNALISTYLKLGFPREAIL---VFV 138
Query: 186 EIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNL-RPQNDTMVSVLSACSSLEIS 244
+ + V +T+LI+G+++ E L++F M + L +P T V++L+AC + +S
Sbjct: 139 SLSSPT-VVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTAC--VRVS 195
Query: 245 KIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVV 304
+ + ++ N +S+ ++ Y + + + FD I +R V
Sbjct: 196 RFSLGIQIHGLIVKSGFLNSVFVSNSLMSL--YDKDSGSSCDDVLKLFDEIP---QRDVA 250
Query: 305 PWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEY 364
WN ++S+ V++G + LF M + + T+ ++LS+C L G+ +H
Sbjct: 251 SWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGR 310
Query: 365 LISIGHKGNIGSNQILA---------------------------TSLIDMYSKCGRLDRA 397
I IG + N L T +I Y G +D A
Sbjct: 311 AIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSA 370
Query: 398 KEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSAC 454
E+F + K+ + +NA++ G NG G AL+LF M + G++ + A+ AC
Sbjct: 371 VEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDAC 427
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 161/547 (29%), Positives = 265/547 (48%), Gaps = 48/547 (8%)
Query: 27 VDHTPTTFTNLLQ--GHIPRSHLL-QIHARIFQLGAHQDNLLATRLIGHYPP-RI---AL 79
V T T+F +L+ G I LL Q+H + + G + L T ++ Y R+ A
Sbjct: 158 VRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDAR 217
Query: 80 RVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSK 139
RVF + NP+ +N I+R E G +F + + P + T S ++ C RS
Sbjct: 218 RVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSL 277
Query: 140 DARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSL 199
+ +HA K+ + D VS + +Y + R + AR+VFD+ + ++ WTS
Sbjct: 278 ALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDR-LESARRVFDQTRSK-DLKSWTSA 335
Query: 200 ITGYAQSGHGEEVLQLFHMMVRQNLRPQN------------DTMVSVLSACSSLEISKIE 247
++GYA SG E +LF +M +N+ N D + L+ EI I+
Sbjct: 336 MSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQ-EIENID 394
Query: 248 R----WVYFLSELIDDSTSNGESCH--------DS---VNTVLVYLFGKWGNVEKSRERF 292
W+ + I D G+ H D+ V L+ ++GK G ++ + F
Sbjct: 395 NVTLVWILNVCSGISD-VQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWF 453
Query: 293 DRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQI 352
++S R V WNA+++ + G + LS F M E +P+ T+ ++L+ CA I
Sbjct: 454 RQMSEL--RDEVSWNALLTGVARVGRSEQALSFFEGMQVEA--KPSKYTLATLLAGCANI 509
Query: 353 GDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLF 412
L+LGK +H +LI G+K ++ ++ +++DMYSKC D A EVF+ A ++D++L+
Sbjct: 510 PALNLGKAIHGFLIRDGYKIDV----VIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILW 565
Query: 413 NAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMS- 471
N++I G NG ++ LF + G++P+ TFLG L AC G +E G Q F MS
Sbjct: 566 NSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMST 625
Query: 472 -FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQ 530
+ S +EHY C I+L + GC+ + E + MPF P + + C + +L
Sbjct: 626 KYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGA 685
Query: 531 EVSKRLV 537
+KRL+
Sbjct: 686 WAAKRLM 692
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 219/469 (46%), Gaps = 57/469 (12%)
Query: 93 FNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQ 152
+NA+I A+ G VF +F + + + +F+ +LK C D R Q+H +
Sbjct: 130 WNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVV 189
Query: 153 KMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEV 212
K GY + + +V VY + R + AR+VFDEI + S+V+ W ++ Y + G +E
Sbjct: 190 KYGYSGNVDLETSIVDVYGKC-RVMSDARRVFDEIVNPSDVS-WNVIVRRYLEMGFNDEA 247
Query: 213 LQLFHMMVRQNLRPQNDTMVSVLSACS---SLEISKIERWVYFLSELIDDSTSNGESCHD 269
+ +F M+ N+RP N T+ SV+ ACS +LE+ K+ + ++ D+
Sbjct: 248 VVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTV-------- 299
Query: 270 SVNTVLVYLFGKWGNVEKSRERFDRISAAG----------------------------KR 301
V+T + ++ K +E +R FD+ + +R
Sbjct: 300 -VSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPER 358
Query: 302 GVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWV 361
+V WNAM+ YV E L +M +E ++VT+V +L+ C+ I D+ +GK
Sbjct: 359 NIVSWNAMLGGYVHAHEWDEALDFLTLMRQE-IENIDNVTLVWILNVCSGISDVQMGKQA 417
Query: 362 HEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVS-KDVVLFNAMIMGLA 420
H ++ G+ N+ I+A +L+DMY KCG L A F +D V +NA++ G+A
Sbjct: 418 HGFIYRHGYDTNV----IVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVA 473
Query: 421 VNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQI----FRDMSFSTSL 476
G E AL F M + +P+ T L+ C++ L G+ I RD + +
Sbjct: 474 RVGRSEQALSFFEGM-QVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRD-GYKIDV 531
Query: 477 TLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSR 525
+ +D+ ++ C + AIEV + + +W +++ GC + R
Sbjct: 532 VIR--GAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSIIRGCCRNGR 577
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 170/340 (50%), Gaps = 27/340 (7%)
Query: 102 EQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARC----AEQVHAHIQKMGYL 157
E G+VS S+ +P ++ +L + FRS ++ A +V +H+ L
Sbjct: 41 EGGNVSKAVSVL------FASPEPVSY-WLYERLFRSCSSKALVVQARKVQSHLVTFSPL 93
Query: 158 NDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFH 217
+ N + Y + V AR++F+E+P+R + W ++IT AQ+G +EV ++F
Sbjct: 94 PPIFLLNRAIEAYGKC-GCVDDARELFEEMPERDGGS-WNAVITACAQNGVSDEVFRMFR 151
Query: 218 MMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVY 277
M R +R + VL +C + ++ L +L G S + + T +V
Sbjct: 152 RMNRDGVRATETSFAGVLKSCGLILDLRL------LRQLHCAVVKYGYSGNVDLETSIVD 205
Query: 278 LFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRP 337
++GK + +R FD I V WN ++ Y++ G E + +F M+ E RP
Sbjct: 206 VYGKCRVMSDARRVFDEIVNPSD---VSWNVIVRRYLEMGFNDEAVVMFFKML-ELNVRP 261
Query: 338 NHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRA 397
+ T+ SV+ AC++ L +GK +H +I K ++ ++ +++TS+ DMY KC RL+ A
Sbjct: 262 LNHTVSSVMLACSRSLALEVGKVIH----AIAVKLSVVADTVVSTSVFDMYVKCDRLESA 317
Query: 398 KEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPE 437
+ VF+ SKD+ + + + G A++G +A LF MPE
Sbjct: 318 RRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPE 357
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 125/273 (45%), Gaps = 41/273 (15%)
Query: 279 FGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPN 338
+GK G V+ +RE F+ + +R WNA+I+A Q+G E +FR M ++G R
Sbjct: 106 YGKCGCVDDARELFEEMP---ERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGV-RAT 161
Query: 339 HVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAK 398
+ VL +C I DL L + +H ++ G+ GN+ L TS++D+Y KC + A+
Sbjct: 162 ETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVD----LETSIVDVYGKCRVMSDAR 217
Query: 399 EVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSG 458
VF+ V+ V +N ++ G ++A+ +F+KM E ++P T + ACS S
Sbjct: 218 RVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSL 277
Query: 459 FLERGR---------QIFRDMSFSTSL-----------------------TLEHYACYID 486
LE G+ + D STS+ L+ + +
Sbjct: 278 ALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMS 337
Query: 487 LLARVGCIEEAIEVVTSMPFKPNNFVWGALLGG 519
A G EA E+ MP + N W A+LGG
Sbjct: 338 GYAMSGLTREARELFDLMP-ERNIVSWNAMLGG 369
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 6/141 (4%)
Query: 380 LATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFG 439
L I+ Y KCG +D A+E+FE +D +NA+I A NG ++ R+F +M G
Sbjct: 98 LLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDG 157
Query: 440 LQPNAGTFLGALSACSHSGFLERGRQI---FRDMSFSTSLTLEHYACYIDLLARVGCIEE 496
++ +F G L +C L RQ+ +S ++ LE +D+ + + +
Sbjct: 158 VRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLE--TSIVDVYGKCRVMSD 215
Query: 497 AIEVVTSMPFKPNNFVWGALL 517
A V + P++ W ++
Sbjct: 216 ARRVFDEI-VNPSDVSWNVIV 235
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 142/439 (32%), Positives = 222/439 (50%), Gaps = 40/439 (9%)
Query: 176 NVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVL 235
N +A +VF I + V + ++I Y+ G E L F M + + T +L
Sbjct: 51 NSDYANRVFSHIQN-PNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLL 109
Query: 236 SACSSLEISKIERWVYFLSELIDDS---------------TSNG-----ESCHDSVN--- 272
+CSSL + + V+ ELI TS G + D ++
Sbjct: 110 KSCSSLSDLRFGKCVH--GELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERN 167
Query: 273 ----TVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRI 328
+++ F G+VE+ F ++S +R +V WN+MIS+ + G E L LF
Sbjct: 168 VVVWNLMIRGFCDSGDVERGLHLFKQMS---ERSIVSWNSMISSLSKCGRDREALELFCE 224
Query: 329 MVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMY 388
M+ +G P+ T+V+VL A +G L GKW+H S G + + + +L+D Y
Sbjct: 225 MIDQGFD-PDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFIT---VGNALVDFY 280
Query: 389 SKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFG-LQPNAGTF 447
K G L+ A +F ++VV +N +I G AVNG+GE + LF M E G + PN TF
Sbjct: 281 CKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATF 340
Query: 448 LGALSACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMP 505
LG L+ CS++G +ERG ++F M F EHY +DL++R G I EA + + +MP
Sbjct: 341 LGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMP 400
Query: 506 FKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSA 565
N +WG+LL C H V+LA+ + LV+++P +SG YV+L+N A + +W DV
Sbjct: 401 VNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEK 460
Query: 566 LRLEMREKGIKKQPGSSWI 584
+R M++ ++K G S I
Sbjct: 461 VRTLMKKNRLRKSTGQSTI 479
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/451 (25%), Positives = 206/451 (45%), Gaps = 56/451 (12%)
Query: 37 LLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIG----HYPPRIALRVFHYLHNPNIFP 92
LL GH R+ L +IHA + + H NLL I A RVF ++ NPN+
Sbjct: 10 LLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLV 69
Query: 93 FNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQ 152
FNA+I+ + G S F+ +K R + +++T++ LLK C D R + VH +
Sbjct: 70 FNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELI 129
Query: 153 KMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRS--------------------- 191
+ G+ + G+V +Y G R + A+KVFDE+ +R+
Sbjct: 130 RTGFHRLGKIRIGVVELYTSGGR-MGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGL 188
Query: 192 ---------EVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLE 242
+ W S+I+ ++ G E L+LF M+ Q P T+V+VL +SL
Sbjct: 189 HLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLG 248
Query: 243 ISKIERWVYFLSE---LIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG 299
+ +W++ +E L D +V LV + K G++E + F ++
Sbjct: 249 VLDTGKWIHSTAESSGLFKDFI--------TVGNALVDFYCKSGDLEAATAIFRKMQ--- 297
Query: 300 KRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGK 359
+R VV WN +IS +G G+ LF M++EG PN T + VL+ C+ G + G+
Sbjct: 298 RRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGE 357
Query: 360 WVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHA-VSKDVVLFNAMIMG 418
+ ++ + + + +++D+ S+ GR+ A + ++ V+ + ++ +++
Sbjct: 358 ELFGLMM---ERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLS- 413
Query: 419 LAVNGEGEDALRLFYKMPEFGLQP-NAGTFL 448
A G+ L M ++P N+G ++
Sbjct: 414 -ACRSHGDVKLAEVAAMELVKIEPGNSGNYV 443
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 138/454 (30%), Positives = 232/454 (51%), Gaps = 27/454 (5%)
Query: 128 FSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYAR-GFRNVVFARKVFDE 186
F+ LL+ C+ + +VH I N+ +S+ LV +YA G+ V A +VFD
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEV--AHEVFDR 152
Query: 187 IPDR-SEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISK 245
+ R S W SLI+GYA+ G E+ + L+ M ++P T VL AC + +
Sbjct: 153 MSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQ 212
Query: 246 IERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVP 305
I ++ D G V LV ++ K G++ K+R FD I + V
Sbjct: 213 IGEAIH------RDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIP---HKDYVS 263
Query: 306 WNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYL 365
WN+M++ Y+ G E L +FR+MV+ G P+ V + SVL A++ G+ +H ++
Sbjct: 264 WNSMLTGYLHHGLLHEALDIFRLMVQNGI-EPDKVAISSVL---ARVLSFKHGRQLHGWV 319
Query: 366 ISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEG 425
I G + + +A +LI +YSK G+L +A +F+ + +D V +NA+I + N G
Sbjct: 320 IRRGMEWELS----VANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNG 375
Query: 426 EDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMS--FSTSLTLEHYAC 483
L+ F +M +P+ TF+ LS C+++G +E G ++F MS + +EHYAC
Sbjct: 376 ---LKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYAC 432
Query: 484 YIDLLARVGCIEEAIE-VVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPT 542
++L R G +EEA +V M + VWGALL C LH ++ + ++RL E++P
Sbjct: 433 MVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPD 492
Query: 543 SSGGYVMLANALASDRQWNDVSALRLEMREKGIK 576
+ + +L + ++ DV +R M ++G++
Sbjct: 493 NEHNFELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 184/408 (45%), Gaps = 35/408 (8%)
Query: 77 IALRVFHYLHNPNIFPF--NAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKV 134
+A VF + + PF N++I AE G +L+ + + P+ FTF +LK
Sbjct: 145 VAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKA 204
Query: 135 CFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVT 194
C + E +H + K G+ D V N LV +YA+ ++V AR VFD IP + V+
Sbjct: 205 CGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAK-CGDIVKARNVFDMIPHKDYVS 263
Query: 195 CWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISK-IERWVYFL 253
W S++TGY G E L +F +MV+ + P + SVL+ S + + + WV
Sbjct: 264 -WNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWV--- 319
Query: 254 SELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAY 313
G SV L+ L+ K G + ++ FD++ +R V WNA+ISA+
Sbjct: 320 -------IRRGMEWELSVANALIVLYSKRGQLGQACFIFDQML---ERDTVSWNAIISAH 369
Query: 314 VQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKG- 372
++ GL F M + +P+ +T VSVLS CA G + G E L S+ K
Sbjct: 370 SKNS---NGLKYFEQMHR-ANAKPDGITFVSVLSLCANTGMVEDG----ERLFSLMSKEY 421
Query: 373 NIGSNQILATSLIDMYSKCGRLDRAKE--VFEHAVSKDVVLFNAMIMGLAVNGEGE---- 426
I ++++Y + G ++ A V E + ++ A++ ++G +
Sbjct: 422 GIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEV 481
Query: 427 DALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFST 474
A RLF P+ + N + S + +ER RQ+ D T
Sbjct: 482 AAQRLFELEPDN--EHNFELLIRIYSKAKRAEDVERVRQMMVDRGLET 527
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/329 (36%), Positives = 181/329 (55%), Gaps = 20/329 (6%)
Query: 271 VNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQ-----DGCPVEGLSL 325
+ T L++ + K G++ +R+ FD + +R V WNAMI Y + + + L
Sbjct: 149 IGTTLLHFYAKNGDLRYARKVFDEMP---ERTSVTWNAMIGGYCSHKDKGNHNARKAMVL 205
Query: 326 FRIMVKEGT-TRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSL 384
FR G+ RP TMV VLSA +Q G L +G VH Y+ +G + + + T+L
Sbjct: 206 FRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEV--DVFIGTAL 263
Query: 385 IDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNA 444
+DMYSKCG L+ A VFE K+V + +M GLA+NG G + L +M E G++PN
Sbjct: 264 VDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNE 323
Query: 445 GTFLGALSACSHSGFLERGRQIFRDMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVT 502
TF LSA H G +E G ++F+ M F + +EHY C +DLL + G I+EA + +
Sbjct: 324 ITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFIL 383
Query: 503 SMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEV---DPTSSGG----YVMLANALA 555
+MP KP+ + +L C ++ + +E+ K L+E+ D SG YV L+N LA
Sbjct: 384 AMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLA 443
Query: 556 SDRQWNDVSALRLEMREKGIKKQPGSSWI 584
+W +V LR EM+E+ IK +PG S++
Sbjct: 444 HKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 186/399 (46%), Gaps = 41/399 (10%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHYPPRIA---------LRVFHYLHNPNIFPFNAIIRV 99
QIHA++ G H DN L +LIGHY + + L VF +P+ F FN +++
Sbjct: 26 QIHAQLVINGCH-DNSLFGKLIGHYCSKPSTESSSKLAHLLVFPRFGHPDKFLFNTLLKC 84
Query: 100 LAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDA---RCAEQVHAHIQKMGY 156
+ + +F+ + K +L N+ TF F+L C RS + R VH ++K+G+
Sbjct: 85 SKPEDSI-RIFANYAS-KSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMVKKLGF 142
Query: 157 LNDPS-VSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQ-----SGHGE 210
L + + L+ YA+ ++ +ARKVFDE+P+R+ VT W ++I GY + +
Sbjct: 143 LYESELIGTTLLHFYAKN-GDLRYARKVFDEMPERTSVT-WNAMIGGYCSHKDKGNHNAR 200
Query: 211 EVLQLFHMM--VRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCH 268
+ + LF +RP + TMV VLSA S + +I V+ E + +
Sbjct: 201 KAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTP----EVD 256
Query: 269 DSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRI 328
+ T LV ++ K G + + F+ + + V W +M + +G E +L
Sbjct: 257 VFIGTALVDMYSKCGCLNNAFSVFELMKV---KNVFTWTSMATGLALNGRGNETPNLLNR 313
Query: 329 MVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILA--TSLID 386
M + G +PN +T S+LSA IG + G + + + K G ++ ++D
Sbjct: 314 MAESG-IKPNEITFTSLLSAYRHIGLVEEGIELFKSM-----KTRFGVTPVIEHYGCIVD 367
Query: 387 MYSKCGRLDRAKE-VFEHAVSKDVVLFNAMIMGLAVNGE 424
+ K GR+ A + + + D +L ++ ++ GE
Sbjct: 368 LLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGE 406
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 162/524 (30%), Positives = 257/524 (49%), Gaps = 32/524 (6%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFL--LKVC 135
AL +F + ++ +N +I L G + +F D++ + P +FTFS L L C
Sbjct: 89 ALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTC 148
Query: 136 FRSKDARCAEQVHAHIQKMGYLN-DPSVSNGLVAVYAR-GFRNVVFARKVFDEIPDRSEV 193
R EQ+H + G + V N ++ +Y R G + +A VF + DR +V
Sbjct: 149 VRH-----GEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFD--YALSVFLTMEDR-DV 200
Query: 194 TCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSL-EISKIERWVYF 252
W LI + SG+ E L F +M ++P T+ V+S CS L E+SK ++ +
Sbjct: 201 VSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALAL 260
Query: 253 LSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISA 312
++ G + V + +F K ++ S + F + K V N+MI +
Sbjct: 261 CIKM-------GFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELE---KWDSVLCNSMIGS 310
Query: 313 YVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKG 372
Y C + L LF I+ + RP+ T SVLS+ + L G VH +I +G
Sbjct: 311 YSWHCCGEDALRLF-ILAMTQSVRPDKFTFSSVLSSMNAVM-LDHGADVHSLVIKLGFDL 368
Query: 373 NIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLF 432
+ +ATSL++MY K G +D A VF KD++ +N +IMGLA N ++L +F
Sbjct: 369 DTA----VATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIF 424
Query: 433 YKM-PEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTL--EHYACYIDLLA 489
++ L+P+ T +G L AC ++GF+ G QIF M + + EHYAC I+LL
Sbjct: 425 NQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLC 484
Query: 490 RVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVM 549
RVG I EA ++ +PF+P++ +W +L L LA+ V+K ++E +P SS Y++
Sbjct: 485 RVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLV 544
Query: 550 LANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEF 593
L +W + LR M E +K GSS IS++ V F
Sbjct: 545 LIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSF 588
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 194/435 (44%), Gaps = 52/435 (11%)
Query: 123 PNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARK 182
P+ FS L+ SK A+ VHA + + G++ N + +Y + +V+ A +
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKS-GSVINALQ 60
Query: 183 VFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLE 242
+FD+IPD++ +T W + G ++G+ L LF M +++ N TM+S L +C E
Sbjct: 61 LFDDIPDKNTIT-WNVCLKGLFKNGYLNNALDLFDEMPERDVVSWN-TMISGLVSCGFHE 118
Query: 243 IS-----KIERW--------VYFLSELIDDSTSNGESCHDSV--NTVLVYLFGKWGNVEK 287
++RW L+ L+ +GE H + + V Y W +V
Sbjct: 119 YGIRVFFDMQRWEIRPTEFTFSILASLV-TCVRHGEQIHGNAICSGVSRYNLVVWNSVMD 177
Query: 288 SRERFDRISAA-------GKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHV 340
R A R VV WN +I + G L F +M +E +P+
Sbjct: 178 MYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLM-REMEIQPDEY 236
Query: 341 TMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEV 400
T+ V+S C+ + +LS GK I +G SN I+ + IDM+SKC RLD + ++
Sbjct: 237 TVSMVVSICSDLRELSKGKQALALCIKMGFL----SNSIVLGAGIDMFSKCNRLDDSVKL 292
Query: 401 FEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACS----- 455
F D VL N+MI + + GEDALRLF ++P+ TF LS+ +
Sbjct: 293 FRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVMLD 352
Query: 456 -----HSGFLERGRQIFRDMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNN 510
HS ++ G + D + +TSL +++ + G ++ A+ V K
Sbjct: 353 HGADVHSLVIKLGFDL--DTAVATSL--------MEMYFKTGSVDLAMGVFAKTDGKDLI 402
Query: 511 FVWGALLGGCLLHSR 525
F W ++ G +SR
Sbjct: 403 F-WNTVIMGLARNSR 416
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 8/156 (5%)
Query: 390 KCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTF-- 447
K G L+ A ++F+ +DVV +N MI GL G E +R+F+ M + ++P TF
Sbjct: 82 KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSI 141
Query: 448 LGALSACSHSGFLERGRQIFRDMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFK 507
L +L C G G I +S L + +D+ R+G + A+ V +M +
Sbjct: 142 LASLVTCVRHGEQIHGNAICSGVS---RYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDR 198
Query: 508 PNNFVWGALLGGCLL--HSRVELAQEVSKRLVEVDP 541
+ W L+ C + V L Q R +E+ P
Sbjct: 199 -DVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQP 233
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 160/576 (27%), Positives = 277/576 (48%), Gaps = 51/576 (8%)
Query: 33 TFTNLLQGHIPRS--HLLQIHARIFQLGAHQDNLLATRLIGHYPP--RI--ALRVFHYLH 86
T+ ++ G++ L+ ++F +D+ +I Y RI AL +F +
Sbjct: 104 TWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMP 163
Query: 87 NPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQ 146
N ++A+I + G V LF + + +P + L+K S+ A Q
Sbjct: 164 ERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQ 223
Query: 147 VHAHIQKMGYLNDPSVSNGLVAVYA-RGFRNVVFARKVFDEIPDR--------------S 191
+ + G + N L+ Y RG V AR +FD+IPD
Sbjct: 224 YGSLVS--GREDLVYAYNTLIVGYGQRG--QVEAARCLFDQIPDLCGDDHGGEFRERFCK 279
Query: 192 EVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVY 251
V W S+I Y + G LF M ++ N TM+ + +S++E
Sbjct: 280 NVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWN-TMID-----GYVHVSRMEDAFA 333
Query: 252 FLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMIS 311
SE+ + + ++V + GNVE +R F++ ++ V WN++I+
Sbjct: 334 LFSEMPNRDAHSW--------NMMVSGYASVGNVELARHYFEKTP---EKHTVSWNSIIA 382
Query: 312 AYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHK 371
AY ++ E + LF M EG +P+ T+ S+LSA + +L LG +H+ ++
Sbjct: 383 AYEKNKDYKEAVDLFIRMNIEGE-KPDPHTLTSLLSASTGLVNLRLGMQMHQIVVK---- 437
Query: 372 GNIGSNQILATSLIDMYSKCGRLDRAKEVF-EHAVSKDVVLFNAMIMGLAVNGEGEDALR 430
+ + + +LI MYS+CG + ++ +F E + ++V+ +NAMI G A +G +AL
Sbjct: 438 -TVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALN 496
Query: 431 LFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMS--FSTSLTLEHYACYIDLL 488
LF M G+ P+ TF+ L+AC+H+G ++ + F M + +EHY+ +++
Sbjct: 497 LFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVT 556
Query: 489 ARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYV 548
+ G EEA+ ++TSMPF+P+ VWGALL C +++ V LA ++ + ++P SS YV
Sbjct: 557 SGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYV 616
Query: 549 MLANALASDRQWNDVSALRLEMREKGIKKQPGSSWI 584
+L N A W++ S +R+ M K IKK+ GSSW+
Sbjct: 617 LLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWV 652
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 110/468 (23%), Positives = 195/468 (41%), Gaps = 63/468 (13%)
Query: 93 FNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQ 152
N +IR G+++ +F L+ R N T++ ++ + ++ A ++ +
Sbjct: 47 LNQMIR----SGYIAEARDIFEKLEAR----NTVTWNTMISGYVKRREMNQARKLFDVMP 98
Query: 153 KMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEV 212
K + ++ +G V+ G R + ARK+FDE+P R + W ++I+GYA++ E
Sbjct: 99 KRDVVTWNTMISGYVS--CGGIRFLEEARKLFDEMPSRDSFS-WNTMISGYAKNRRIGEA 155
Query: 213 LQLFHMMVRQNLRP---------QNDTMVSVLSACSSLEISKIERWVYFLSELIDDS--- 260
L LF M +N QN + S + + + ++ LI +
Sbjct: 156 LLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLS 215
Query: 261 ------------TSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRI------SAAGK-- 300
S E + NT++V +G+ G VE +R FD+I G+
Sbjct: 216 EAAWVLGQYGSLVSGREDLVYAYNTLIVG-YGQRGQVEAARCLFDQIPDLCGDDHGGEFR 274
Query: 301 ----RGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGD-L 355
+ VV WN+MI AY++ G V LF M T N TM+ +++ D
Sbjct: 275 ERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWN--TMIDGYVHVSRMEDAF 332
Query: 356 SLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAM 415
+L E H N+ ++ Y+ G ++ A+ FE K V +N++
Sbjct: 333 AL---FSEMPNRDAHSWNM---------MVSGYASVGNVELARHYFEKTPEKHTVSWNSI 380
Query: 416 IMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTS 475
I N + ++A+ LF +M G +P+ T LSA + L G Q+ + + +
Sbjct: 381 IAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI 440
Query: 476 LTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLH 523
+ + I + +R G I E+ + M K W A++GG H
Sbjct: 441 PDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFH 488
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 15/177 (8%)
Query: 390 KCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLG 449
+ G + A+++FE +++ V +N MI G E A +LF MP+ + T +
Sbjct: 52 RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDV-VTWNTMIS 110
Query: 450 ALSACSHSGFLERGRQIFRDM----SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMP 505
+C FLE R++F +M SFS + + YA R+G EA+ + MP
Sbjct: 111 GYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKN----RRIG---EALLLFEKMP 163
Query: 506 FKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYV--MLANALASDRQW 560
+ N W A++ G + V+ A + +++ D + V ++ N S+ W
Sbjct: 164 ER-NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAW 219
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 202 bits (513), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 139/435 (31%), Positives = 210/435 (48%), Gaps = 47/435 (10%)
Query: 187 IPDRSEVTC-WTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVL-SACSSLEIS 244
+ R + C + +LI Y +G + L LF M+ +++P N T S++ +ACSS +S
Sbjct: 44 VASRWKTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVS 103
Query: 245 KIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRI--------- 295
+ L + G V T V +G+ G++E SR+ FD I
Sbjct: 104 -------YGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACN 156
Query: 296 ---SAAGKRG----------------VVPWNAMISAYVQDGCPVEGLSLFRIMVK--EGT 334
A G+ G VV W +I+ + + G + L +F M++
Sbjct: 157 SLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAV 216
Query: 335 TRPNHVTMVSVLSACAQI--GDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCG 392
PN T VSVLS+CA G + LGK +H Y++S I L T+L+DMY K G
Sbjct: 217 ITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMS----KEIILTTTLGTALLDMYGKAG 272
Query: 393 RLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALS 452
L+ A +F+ K V +NA+I LA NG + AL +F M + PN T L L+
Sbjct: 273 DLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILT 332
Query: 453 ACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNN 510
AC+ S ++ G Q+F + + T EHY C +DL+ R G + +A + S+PF+P+
Sbjct: 333 ACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDA 392
Query: 511 FVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEM 570
V GALLG C +H EL V K+L+ + P G YV L+ A D W++ +R M
Sbjct: 393 SVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAM 452
Query: 571 REKGIKKQPGSSWIS 585
E GI+K P S ++
Sbjct: 453 IEAGIRKIPAYSVLT 467
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 135/303 (44%), Gaps = 50/303 (16%)
Query: 93 FNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQ 152
+N +IR G +LF + + PN+ TF L+K S +H
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 153 KMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTC----------------- 195
K G+L DP V V Y ++ +RK+FD+I + V C
Sbjct: 114 KRGFLWDPFVQTSFVRFYGE-VGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 196 -------------WTSLITGYAQSGHGEEVLQLFHMMV---RQNLRPQNDTMVSVLSACS 239
WT++I G+++ G + L +F M+ R + P T VSVLS+C+
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 240 SLEISKIERWV----YFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRI 295
+ + I Y +S+ I +T+ G + D ++GK G++E + FD+I
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLD--------MYGKAGDLEMALTIFDQI 284
Query: 296 SAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDL 355
+ V WNA+ISA +G P + L +F +M K PN +T++++L+ACA+ +
Sbjct: 285 R---DKKVCAWNAIISALASNGRPKQALEMFEMM-KSSYVHPNGITLLAILTACARSKLV 340
Query: 356 SLG 358
LG
Sbjct: 341 DLG 343
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 144/513 (28%), Positives = 243/513 (47%), Gaps = 45/513 (8%)
Query: 81 VFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKV---CFR 137
+F + ++ +N++I ++ G +LF ++ + + F+ S +L + C
Sbjct: 451 LFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSE-YSCSKFSLSTVLAILTSCDS 509
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWT 197
S + VH +QK+G L F R + + + ++T W
Sbjct: 510 SDSLIFGKSVHCWLQKLGDLTSA------------------FLR--LETMSETRDLTSWN 549
Query: 198 SLITGYAQSGHGEEVLQLFHMMVRQ-NLRPQNDTMVSVLSACSSLEISKIERWVYFLSEL 256
S+I+G A SGH E L+ F M R+ +R T++ +SA +L + R + L+
Sbjct: 550 SVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLA-- 607
Query: 257 IDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQD 316
+ + L+ ++G+ ++E + + F IS + WN +ISA Q+
Sbjct: 608 ----IKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPN---LCSWNCVISALSQN 660
Query: 317 GCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGS 376
E LFR + E PN +T V +LSA Q+G S G H +LI G + +
Sbjct: 661 KAGREVFQLFRNLKLE----PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQ----A 712
Query: 377 NQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMP 436
N ++ +L+DMYS CG L+ +VF ++ + +N++I +G GE A+ LF ++
Sbjct: 713 NPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELS 772
Query: 437 EFG-LQPNAGTFLGALSACSHSGFLERGRQIFRDMS--FSTSLTLEHYACYIDLLARVGC 493
++PN +F+ LSACSHSGF++ G ++ M F EH +D+L R G
Sbjct: 773 SNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGK 832
Query: 494 IEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANA 553
+ EA E +T + VWGALL C H +L +EV++ L E++P ++ Y+ LAN
Sbjct: 833 LREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANT 892
Query: 554 LASDRQWNDVSALRLEMREKGIKKQPGSSWISV 586
W + LR + + +KK PG S I V
Sbjct: 893 YVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 181/404 (44%), Gaps = 38/404 (9%)
Query: 109 VFSLFNDLKHRVLAPNDFTFSFL---LKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNG 165
V +LF++L R + +F FL L+ + VH K G L D + S+
Sbjct: 68 VHNLFDELPERENRTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSK 127
Query: 166 LVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQN-- 223
L+ Y R +V + +FDE+ ++ +V W S+IT Q+G + LF M+ +
Sbjct: 128 LLTFYGRT-GELVSSSCLFDELKEK-DVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNE 185
Query: 224 -------LRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLV 276
L + + + CS L IE + L+ DS S+ L+
Sbjct: 186 FDSTTLLLAASALSSLHLSRKCSMLHCLAIE------TGLVGDS---------SLCNALM 230
Query: 277 YLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTR 336
L+ K N+ + F + R +V WN +++ + +G P + L F+ M G
Sbjct: 231 NLYAKGENLSSAECVFTHME---HRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQ-E 286
Query: 337 PNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDR 396
+ VT V+SAC+ I +L+LG+ +H +I G+ ++ + S+I MYSKCG +
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPE--AHVSVGNSIISMYSKCGDTEA 344
Query: 397 AKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFG-LQPNAGTFLGALSACS 455
A+ VFE V +DV+ NA++ G A NG E+A + +M +QP+ T + S C
Sbjct: 345 AETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICG 404
Query: 456 HSGFLERGRQI--FRDMSFSTSLTLEHYACYIDLLARVGCIEEA 497
F GR + + S LE ID+ + G +A
Sbjct: 405 DLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQA 448
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 116/479 (24%), Positives = 217/479 (45%), Gaps = 45/479 (9%)
Query: 50 IHARIFQLGAHQDNLLATRLIGHYPPRIALR----VFHYLHNPNIFPFNAIIRVLAEQGH 105
+H + G D+ L L+ Y L VF ++ + +I +N I+ GH
Sbjct: 210 LHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGH 269
Query: 106 VSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDP--SVS 163
F + + TFS ++ C ++ E +H + K GY + SV
Sbjct: 270 PRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVG 329
Query: 164 NGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVR-Q 222
N ++++Y++ + A VF+E+ R +V +++ G+A +G EE + + M
Sbjct: 330 NSIISMYSK-CGDTEAAETVFEELVCR-DVISSNAILNGFAANGMFEEAFGILNQMQSVD 387
Query: 223 NLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKW 282
++P T+VS+ S C L S+ R V+ + ++ + E +N+V + ++GK
Sbjct: 388 KIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALE----VINSV-IDMYGKC 442
Query: 283 GNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKE-GTTRPNHVT 341
G ++ F + R +V WN+MISA+ Q+G + +LF+ +V E ++ + T
Sbjct: 443 GLTTQAELLFKTTT---HRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLST 499
Query: 342 MVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVF 401
++++L++C L GK VH +L +G D+ S RL+ E
Sbjct: 500 VLAILTSCDSSDSLIFGKSVHCWLQKLG----------------DLTSAFLRLETMSE-- 541
Query: 402 EHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFG-LQPNAGTFLGALSACSHSGFL 460
++D+ +N++I G A +G ++LR F M G ++ + T LG +SA + G +
Sbjct: 542 ----TRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLV 597
Query: 461 ERGRQIFRDMSFST--SLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALL 517
+GR F ++ + L + I + R IE A++V + PN W ++
Sbjct: 598 LQGR-CFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVF-GLISDPNLCSWNCVI 654
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 111/245 (45%), Gaps = 31/245 (12%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFR 137
A++VF + +PN+ +N +I L++ VF LF +LK L PN+ TF LL +
Sbjct: 635 AVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK---LEPNEITFVGLLSASTQ 691
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYAR-GFRNVVFARKVFDEIPDRSEVTCW 196
Q H H+ + G+ +P VS LV +Y+ G KVF S ++ W
Sbjct: 692 LGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLET--GMKVFRNSGVNS-ISAW 748
Query: 197 TSLITGYAQSGHGEEVLQLF-HMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSE 255
S+I+ + G GE+ ++LF + + P + +S+LSACS S
Sbjct: 749 NSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSH-------------SG 795
Query: 256 LIDDSTSNGESCHDS-----VNTVLVYLFGKWGNVEKSRERFDRISAAG---KRGVVPWN 307
ID+ S + + V V++ G K RE ++ I+ G K GV W
Sbjct: 796 FIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGV--WG 853
Query: 308 AMISA 312
A++SA
Sbjct: 854 ALLSA 858
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 198 bits (504), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 147/542 (27%), Positives = 251/542 (46%), Gaps = 55/542 (10%)
Query: 50 IHARIFQLGAHQDNLLATRLIGHY----PPRIALRVFHYLHNPNIFPFNAIIRVLAEQGH 105
+HA + G + +A +L+ Y A +VF + +I +I A G+
Sbjct: 38 LHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGY 97
Query: 106 VSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNG 165
F ++ L + F LLK D + +H + K Y +D + +
Sbjct: 98 YQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSS 157
Query: 166 LVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLR 225
L+ +Y++ F V ARKVF ++ ++ ++ + ++I+GYA + +E L L M ++
Sbjct: 158 LIDMYSK-FGEVGNARKVFSDLGEQ-DLVVFNAMISGYANNSQADEALNLVKDMKLLGIK 215
Query: 226 PQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNV 285
P T +++S S + N
Sbjct: 216 PDVITWNALISGFSHMR-----------------------------------------NE 234
Query: 286 EKSRERFDRISAAG-KRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVS 344
EK E + + G K VV W ++IS V + + F+ M+ G PN T+++
Sbjct: 235 EKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGL-YPNSATIIT 293
Query: 345 VLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHA 404
+L AC + + GK +H Y + G + + + ++L+DMY KCG + A +F
Sbjct: 294 LLPACTTLAYMKHGKEIHGYSVVTG----LEDHGFVRSALLDMYGKCGFISEAMILFRKT 349
Query: 405 VSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGR 464
K V FN+MI A +G + A+ LF +M G + + TF L+ACSH+G + G+
Sbjct: 350 PKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQ 409
Query: 465 QIFRDMSFSTSLT--LEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLL 522
+F M + LEHYAC +DLL R G + EA E++ +M +P+ FVWGALL C
Sbjct: 410 NLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRN 469
Query: 523 HSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSS 582
H +ELA+ +K L E++P +SG ++L + A+ W V ++ +++K ++ GSS
Sbjct: 470 HGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSS 529
Query: 583 WI 584
W+
Sbjct: 530 WV 531
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 152/582 (26%), Positives = 261/582 (44%), Gaps = 62/582 (10%)
Query: 32 TTFTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPPRIALRVFHYLHN---- 87
T+ LL+G QIH + G D + L+ Y + YL
Sbjct: 136 TSLVLLLRGE-------QIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEG 188
Query: 88 -PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQ 146
N + +++ ++ G F DL+ N +TF +L C R Q
Sbjct: 189 EKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQ 248
Query: 147 VHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQS 206
VH I K G+ + V + L+ +YA+ R + AR + + + + +V W S+I G +
Sbjct: 249 VHCCIVKSGFKTNIYVQSALIDMYAK-CREMESARALLEGM-EVDDVVSWNSMIVGCVRQ 306
Query: 207 GHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGES 266
G E L +F M ++++ + T+ S+L+ +S+ E + + + T G +
Sbjct: 307 GLIGEALSMFGRMHERDMKIDDFTIPSILNC---FALSRTEMKIASSAHCLIVKT--GYA 361
Query: 267 CHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLF 326
+ VN LV ++ K G ++ + + F+ + ++ V+ W A+++ +G E L LF
Sbjct: 362 TYKLVNNALVDMYAKRGIMDSALKVFEGMI---EKDVISWTALVTGNTHNGSYDEALKLF 418
Query: 327 RIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLID 386
M G T P+ + SVLSA A++ L G+ VH I G ++ N SL+
Sbjct: 419 CNMRVGGIT-PDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNN----SLVT 473
Query: 387 MYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPE-FGLQPNAG 445
MY+KCG L+ A +F +D++ + +I+G A NG EDA R F M +G+ P
Sbjct: 474 MYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGP- 532
Query: 446 TFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMP 505
EHYAC IDL R G + +++ M
Sbjct: 533 ---------------------------------EHYACMIDLFGRSGDFVKVEQLLHQME 559
Query: 506 FKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSA 565
+P+ VW A+L H +E + +K L+E++P ++ YV L+N ++ + ++ +
Sbjct: 560 VEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAAN 619
Query: 566 LRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIY 607
+R M+ + I K+PG SW+ G VH F+ HP++ IY
Sbjct: 620 VRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIY 661
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 140/524 (26%), Positives = 252/524 (48%), Gaps = 30/524 (5%)
Query: 17 LLPFRSSC--SIVDHTPTTFTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYP 74
L PF SC S D T +NLL G + +S + ++F +D +I Y
Sbjct: 13 LKPF-GSCIHSYADRTKL-HSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYS 70
Query: 75 P--RIALRVFHYLHNP--NIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSF 130
R++ + NP N +NA+I + G F+LF +++ + PN++T
Sbjct: 71 NSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGS 130
Query: 131 LLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDR 190
+L++C EQ+H H K G+ D +V NGL+A+YA+ R + A +F+ +
Sbjct: 131 VLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKR-ISEAEYLFETMEGE 189
Query: 191 SEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWV 250
WTS++TGY+Q+G + ++ F + R+ + T SVL+AC+S+ ++ V
Sbjct: 190 KNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQV 249
Query: 251 YFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMI 310
+ +G + V + L+ ++ K +E +R + + VV WN+MI
Sbjct: 250 HCCI------VKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEV---DDVVSWNSMI 300
Query: 311 SAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACA-QIGDLSLGKWVHEYLISIG 369
V+ G E LS+F M E + + T+ S+L+ A ++ + H ++ G
Sbjct: 301 VGCVRQGLIGEALSMFGRM-HERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTG 359
Query: 370 HKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDAL 429
+ + +++ +L+DMY+K G +D A +VFE + KDV+ + A++ G NG ++AL
Sbjct: 360 Y----ATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEAL 415
Query: 430 RLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQI---FRDMSFSTSLTLEHYACYID 486
+LF M G+ P+ LSA + LE G+Q+ + F +SL++ + +
Sbjct: 416 KLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNN--SLVT 473
Query: 487 LLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQ 530
+ + G +E+A + SM + + W L+ G + +E AQ
Sbjct: 474 MYTKCGSLEDANVIFNSMEIR-DLITWTCLIVGYAKNGLLEDAQ 516
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 150/591 (25%), Positives = 290/591 (49%), Gaps = 33/591 (5%)
Query: 27 VDHTPTTFTNLLQGHIPRSHLL---QIHARIFQLGAHQDNLLATRLIGHYPP----RIAL 79
V +TFT+L+Q +L ++++I +LG + ++ T ++G Y A
Sbjct: 195 VKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESAR 254
Query: 80 RVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSK 139
R+F ++N + +N +I + + F ++ + P FT+S +L C +
Sbjct: 255 RIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLG 314
Query: 140 DARCAEQVHAHIQKMGYLNDPSVSNGLVAVYAR--GFRNVVFARKVFDEIPDRSEVTCWT 197
+ +HA I L D + N L+ +Y R + VF I + + V+ W
Sbjct: 315 SYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFY---VFGRIHNPNLVS-WN 370
Query: 198 SLITGYAQSGHGEEVLQLFHMMVRQNL-RPQNDTMVSVLSACSSLEISKIERWVYFLSEL 256
S+I+G +++G GE+ + ++ ++R + RP T + +SA ++ ER+V+ +L
Sbjct: 371 SIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISA-----TAEPERFVH--GKL 423
Query: 257 IDDSTSN-GESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQ 315
+ + G V T L+ ++ K E +++ FD + +R VV W MI + +
Sbjct: 424 LHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMK---ERDVVLWTEMIVGHSR 480
Query: 316 DGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIG 375
G + F M +E R + ++ SV+ AC+ + L G+ H I G +
Sbjct: 481 LGNSELAVQFFIEMYRE-KNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMS 539
Query: 376 SNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKM 435
+ +L+DMY K G+ + A+ +F A + D+ +N+M+ + +G E AL F ++
Sbjct: 540 ----VCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQI 595
Query: 436 PEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFS-TSLTLEHYACYIDLLARVGCI 494
E G P+A T+L L+ACSH G +G+ ++ M +HY+C ++L+++ G +
Sbjct: 596 LENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLV 655
Query: 495 EEAIEVVTSMPFKPNNF-VWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANA 553
+EA+E++ P N +W LL C+ +++ +++++++DP + +++L+N
Sbjct: 656 DEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNL 715
Query: 554 LASDRQWNDVSALRLEMREKGIKKQPGSSWISV-DGVVHEFLVGYLSHPQI 603
A + +W DV+ +R ++R K PG SWI V + F G S+P++
Sbjct: 716 YAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPEV 766
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 134/547 (24%), Positives = 252/547 (46%), Gaps = 44/547 (8%)
Query: 49 QIHARIFQLGA-------HQDNLLATRLIGHYPPRIALRVFHYLHNPNIFPFNAIIRVLA 101
QIHA + GA + +N L + + A +VF + + N+ +NA+ +
Sbjct: 115 QIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYS 174
Query: 102 EQ-GHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDP 160
S+ F L + + PN TF+ L++VC +D +++ I K+GY ++
Sbjct: 175 RNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNV 234
Query: 161 SVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMV 220
V ++ +Y+ ++ AR++FD + +R V W ++I G ++ E+ L F M+
Sbjct: 235 VVQTSVLGMYS-SCGDLESARRIFDCVNNRDAVA-WNTMIVGSLKNDKIEDGLMFFRNML 292
Query: 221 RQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHD-SVNTVLVYLF 279
+ P T VL+ CS L Y L +LI +S D ++ L+ ++
Sbjct: 293 MSGVDPTQFTYSIVLNGCSKL-------GSYSLGKLIHARIIVSDSLADLPLDNALLDMY 345
Query: 280 GKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNH 339
G++ ++ F RI +V WN++IS ++G + + ++R +++ T RP+
Sbjct: 346 CSCGDMREAFYVFGRIH---NPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDE 402
Query: 340 VTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKE 399
T + +SA A+ GK +H + +G++ ++ + T+L+ MY K + A++
Sbjct: 403 YTFSAAISATAEPERFVHGKLLHGQVTKLGYERSV----FVGTTLLSMYFKNREAESAQK 458
Query: 400 VFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGF 459
VF+ +DVVL+ MI+G + G E A++ F +M + + + + ACS
Sbjct: 459 VFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAM 518
Query: 460 LERGRQIFRDMSFSTSLTLEHYAC--YIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALL 517
L +G ++F ++ T C +D+ + G E A E + S+ P+ W ++L
Sbjct: 519 LRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETA-ETIFSLASNPDLKCWNSML 576
Query: 518 GGCLLHSRVELAQEVSKRLVEVD--PTSSGGYVMLA------NALASDRQWNDVSALRLE 569
G H VE A ++++E P + +LA + L WN +
Sbjct: 577 GAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWN-------Q 629
Query: 570 MREKGIK 576
M+E+GIK
Sbjct: 630 MKEQGIK 636
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 194/399 (48%), Gaps = 20/399 (5%)
Query: 160 PSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCW-TSLITGYAQSGHG--EEVLQL- 215
P +N L+++Y R ++ ARKVFD++P R+ VT + S + Y G ++++L
Sbjct: 22 PYANNNLISMYVR-CSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLG 80
Query: 216 -FHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTV 274
F M+ L ++V + C S+ + K R ++ L L + + ES + N
Sbjct: 81 SFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALV-LTAGAGAATESPY--ANNN 137
Query: 275 LVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQD-GCPVEGLSLFRIMVKEG 333
L+ ++ + G++E++R+ FD++ R VV +NA+ SAY ++ L M E
Sbjct: 138 LISMYVRCGSLEQARKVFDKMP---HRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFE- 193
Query: 334 TTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGR 393
+PN T S++ CA + D+ +G ++ +I +G+ N+ ++ TS++ MYS CG
Sbjct: 194 YVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNV----VVQTSVLGMYSSCGD 249
Query: 394 LDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSA 453
L+ A+ +F+ ++D V +N MI+G N + ED L F M G+ P T+ L+
Sbjct: 250 LESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNG 309
Query: 454 CSHSGFLERGRQIFRDMSFSTSLT-LEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFV 512
CS G G+ I + S SL L +D+ G + EA V + PN
Sbjct: 310 CSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRI-HNPNLVS 368
Query: 513 WGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLA 551
W +++ GC + E A + +RL+ + Y A
Sbjct: 369 WNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSA 407
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 151/554 (27%), Positives = 265/554 (47%), Gaps = 31/554 (5%)
Query: 44 RSHLLQIHARIFQLGAHQDNLLATRLIGHY----PPRIALRVFHYLHNPNIFPFNAIIRV 99
+ LL IH G + L LI Y + A ++F + ++ + A+I
Sbjct: 28 KKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISR 87
Query: 100 LAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAE---QVHAHIQKMGY 156
+ G+ LF ++ + N FT+ +LK C KD C + Q+H ++K
Sbjct: 88 FSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSC---KDLGCLKEGMQIHGSVEKGNC 144
Query: 157 LNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLF 216
+ V + L+++YAR + + AR FD + +R V+ W ++I GY + + LF
Sbjct: 145 AGNLIVRSALLSLYARCGK-MEEARLQFDSMKERDLVS-WNAMIDGYTANACADTSFSLF 202
Query: 217 HMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLV 276
+M+ + +P T S+L A S + + + +SEL + G ++ LV
Sbjct: 203 QLMLTEGKKPDCFTFGSLLRA------SIVVKCLEIVSELHGLAIKLGFGRSSALIRSLV 256
Query: 277 YLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQ-DGCPVEGLSLFRIMVKEGTT 335
+ K G++ + + + KR ++ A+I+ + Q + C + +F+ M++ T
Sbjct: 257 NAYVKCGSLANAWKLHE---GTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRM-KT 312
Query: 336 RPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLD 395
+ + V + S+L C I +++G+ +H + + I + L SLIDMY+K G ++
Sbjct: 313 KMDEVVVSSMLKICTTIASVTIGRQIHGFALK---SSQIRFDVALGNSLIDMYAKSGEIE 369
Query: 396 RAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACS 455
A FE KDV + ++I G +G E A+ L+ +M ++PN TFL LSACS
Sbjct: 370 DAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACS 429
Query: 456 HSGFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMP--FKPNNF 511
H+G E G +I+ M EH +C ID+LAR G +EEA ++ S ++
Sbjct: 430 HTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSS 489
Query: 512 VWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMR 571
WGA L C H V+L++ + +L+ ++P Y+ LA+ A++ W++ R M+
Sbjct: 490 TWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMK 549
Query: 572 EKG-IKKQPGSSWI 584
E G K PG S +
Sbjct: 550 ESGSCNKAPGYSLV 563
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 148/571 (25%), Positives = 257/571 (45%), Gaps = 55/571 (9%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHYPPRIALRVFHYL-HNPNIF---PFNAIIRVLAEQG 104
Q+HA G D++L +L+ Y L + N I P+N +I
Sbjct: 104 QLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNK 163
Query: 105 HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSN 164
S++ + + + ++FT+ ++K C D VH I+ + + V N
Sbjct: 164 RFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCN 223
Query: 165 GLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQ-- 222
L+++Y R F V AR++FD + +R V+ W ++I Y E +L M
Sbjct: 224 ALISMYKR-FGKVDVARRLFDRMSERDAVS-WNAIINCYTSEEKLGEAFKLLDRMYLSGV 281
Query: 223 ---------------------------------NLRPQNDTMVSVLSACSSLEISKIERW 249
N+R + M++ L ACS + K W
Sbjct: 282 EASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALK---W 338
Query: 250 VYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAM 309
L+ S S D+V L+ ++ + ++ + F ++ A + WN++
Sbjct: 339 GKVFHCLVIRSCSFSHDI-DNVRNSLITMYSRCSDLRHAFIVFQQVEA---NSLSTWNSI 394
Query: 310 ISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIG 369
IS + + E L + M+ G PNH+T+ S+L A++G+L GK H Y++
Sbjct: 395 ISGFAYNERSEETSFLLKEMLLSGF-HPNHITLASILPLFARVGNLQHGKEFHCYIL--- 450
Query: 370 HKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDAL 429
+ + IL SL+DMY+K G + AK VF+ +D V + ++I G G+GE AL
Sbjct: 451 RRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVAL 510
Query: 430 RLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMS--FSTSLTLEHYACYIDL 487
F M G++P+ T + LSACSHS + G +F M F L LEHY+C +DL
Sbjct: 511 AWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDL 570
Query: 488 LARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQ-EVSKRLVEVDPTSSGG 546
R G +++A ++ ++P++P++ + LL CL+H + + K L+E P G
Sbjct: 571 YCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGH 630
Query: 547 YVMLANALASDRQWNDVSALRLEMREKGIKK 577
Y++LA+ A W+ + ++ + + G++K
Sbjct: 631 YMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 121/475 (25%), Positives = 195/475 (41%), Gaps = 73/475 (15%)
Query: 93 FNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTF---SFLLKVCFRSKDARCAEQVHA 149
FN+ R G + F F+ L+++ ++F + LL C + +Q+HA
Sbjct: 50 FNSF-RHCISHGQLYEAFRTFSLLRYQS-GSHEFVLYSSASLLSTCVGFNEFVPGQQLHA 107
Query: 150 HIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDE---IPDRSEVT---CWTSLITGY 203
H G D + LV Y+ A + DE I + SE+ W LI Y
Sbjct: 108 HCISSGLEFDSVLVPKLVTFYS--------AFNLLDEAQTITENSEILHPLPWNVLIGSY 159
Query: 204 AQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSN 263
++ +E + ++ M+ + +R T SV+ AC++L R V+ E+ +
Sbjct: 160 IRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEV------S 213
Query: 264 GESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGL 323
C+ V L+ ++ ++G V+ +R FDR+S +R V WNA+I+ Y + E
Sbjct: 214 SHRCNLYVCNALISMYKRFGKVDVARRLFDRMS---ERDAVSWNAIINCYTSEEKLGEAF 270
Query: 324 SLFRIMVKEG----------------------------------TTRPNHVTMVSVLSAC 349
L M G R V M++ L AC
Sbjct: 271 KLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKAC 330
Query: 350 AQIGDLSLGKWVHEYLI-SIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKD 408
+ IG L GK H +I S +I + + SLI MYS+C L A VF+ +
Sbjct: 331 SHIGALKWGKVFHCLVIRSCSFSHDIDN---VRNSLITMYSRCSDLRHAFIVFQQVEANS 387
Query: 409 VVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQ--- 465
+ +N++I G A N E+ L +M G PN T L + G L+ G++
Sbjct: 388 LSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHC 447
Query: 466 -IFRDMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGG 519
I R S+ L L + +D+ A+ G I A V SM K + + +L+ G
Sbjct: 448 YILRRQSYKDCLIL--WNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDG 499
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 148/571 (25%), Positives = 257/571 (45%), Gaps = 55/571 (9%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHYPPRIALRVFHYL-HNPNIF---PFNAIIRVLAEQG 104
Q+HA G D++L +L+ Y L + N I P+N +I
Sbjct: 104 QLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNK 163
Query: 105 HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSN 164
S++ + + + ++FT+ ++K C D VH I+ + + V N
Sbjct: 164 RFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCN 223
Query: 165 GLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQ-- 222
L+++Y R F V AR++FD + +R V+ W ++I Y E +L M
Sbjct: 224 ALISMYKR-FGKVDVARRLFDRMSERDAVS-WNAIINCYTSEEKLGEAFKLLDRMYLSGV 281
Query: 223 ---------------------------------NLRPQNDTMVSVLSACSSLEISKIERW 249
N+R + M++ L ACS + K W
Sbjct: 282 EASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALK---W 338
Query: 250 VYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAM 309
L+ S S D+V L+ ++ + ++ + F ++ A + WN++
Sbjct: 339 GKVFHCLVIRSCSFSHDI-DNVRNSLITMYSRCSDLRHAFIVFQQVEA---NSLSTWNSI 394
Query: 310 ISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIG 369
IS + + E L + M+ G PNH+T+ S+L A++G+L GK H Y++
Sbjct: 395 ISGFAYNERSEETSFLLKEMLLSGF-HPNHITLASILPLFARVGNLQHGKEFHCYIL--- 450
Query: 370 HKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDAL 429
+ + IL SL+DMY+K G + AK VF+ +D V + ++I G G+GE AL
Sbjct: 451 RRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVAL 510
Query: 430 RLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMS--FSTSLTLEHYACYIDL 487
F M G++P+ T + LSACSHS + G +F M F L LEHY+C +DL
Sbjct: 511 AWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDL 570
Query: 488 LARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQ-EVSKRLVEVDPTSSGG 546
R G +++A ++ ++P++P++ + LL CL+H + + K L+E P G
Sbjct: 571 YCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGH 630
Query: 547 YVMLANALASDRQWNDVSALRLEMREKGIKK 577
Y++LA+ A W+ + ++ + + G++K
Sbjct: 631 YMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 121/475 (25%), Positives = 195/475 (41%), Gaps = 73/475 (15%)
Query: 93 FNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTF---SFLLKVCFRSKDARCAEQVHA 149
FN+ R G + F F+ L+++ ++F + LL C + +Q+HA
Sbjct: 50 FNSF-RHCISHGQLYEAFRTFSLLRYQS-GSHEFVLYSSASLLSTCVGFNEFVPGQQLHA 107
Query: 150 HIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDE---IPDRSEVT---CWTSLITGY 203
H G D + LV Y+ A + DE I + SE+ W LI Y
Sbjct: 108 HCISSGLEFDSVLVPKLVTFYS--------AFNLLDEAQTITENSEILHPLPWNVLIGSY 159
Query: 204 AQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSN 263
++ +E + ++ M+ + +R T SV+ AC++L R V+ E+ +
Sbjct: 160 IRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEV------S 213
Query: 264 GESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGL 323
C+ V L+ ++ ++G V+ +R FDR+S +R V WNA+I+ Y + E
Sbjct: 214 SHRCNLYVCNALISMYKRFGKVDVARRLFDRMS---ERDAVSWNAIINCYTSEEKLGEAF 270
Query: 324 SLFRIMVKEG----------------------------------TTRPNHVTMVSVLSAC 349
L M G R V M++ L AC
Sbjct: 271 KLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKAC 330
Query: 350 AQIGDLSLGKWVHEYLI-SIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKD 408
+ IG L GK H +I S +I + + SLI MYS+C L A VF+ +
Sbjct: 331 SHIGALKWGKVFHCLVIRSCSFSHDIDN---VRNSLITMYSRCSDLRHAFIVFQQVEANS 387
Query: 409 VVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQ--- 465
+ +N++I G A N E+ L +M G PN T L + G L+ G++
Sbjct: 388 LSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHC 447
Query: 466 -IFRDMSFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGG 519
I R S+ L L + +D+ A+ G I A V SM K + + +L+ G
Sbjct: 448 YILRRQSYKDCLIL--WNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDG 499
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/411 (32%), Positives = 210/411 (51%), Gaps = 23/411 (5%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHYPPRI-----ALRVFHYLHNPNIFPFNAIIRVLAEQ 103
Q+H + ++G NL+ + ++ + ALR F + ++ + A+I + +
Sbjct: 205 QVHGNMVKVGV--GNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRK 262
Query: 104 GHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVS 163
GH +F + + PN+FT +LK C K R QVH+ + K D V
Sbjct: 263 GHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVG 322
Query: 164 NGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQN 223
L+ +YA+ + RKVFD + +R+ VT WTS+I +A+ G GEE + LF +M R++
Sbjct: 323 TSLMDMYAKC-GEISDCRKVFDGMSNRNTVT-WTSIIAAHAREGFGEEAISLFRIMKRRH 380
Query: 224 LRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWG 283
L N T+VS+L AC S+ + + ++ +++I +S + + + LV+L+ K G
Sbjct: 381 LIANNLTVVSILRACGSVGALLLGKELH--AQIIKNSIEK----NVYIGSTLVWLYCKCG 434
Query: 284 NVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMV 343
+SR+ F+ + R VV W AMIS G E L + M++EG PN T
Sbjct: 435 ---ESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGV-EPNPFTYS 490
Query: 344 SVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEH 403
S L ACA L +G+ +H SI K + SN + ++LI MY+KCG + A VF+
Sbjct: 491 SALKACANSESLLIGRSIH----SIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDS 546
Query: 404 AVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSAC 454
K++V + AMIMG A NG +AL+L Y+M G + + F LS C
Sbjct: 547 MPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 182 bits (461), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 139/446 (31%), Positives = 224/446 (50%), Gaps = 24/446 (5%)
Query: 78 ALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFND-LKHRVLAPNDFTFSFLLKVCF 136
A +VF + N + A+I + G F+LF D +KH + N+ F LL +C
Sbjct: 136 ARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCS 195
Query: 137 RSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCW 196
R + QVH ++ K+G + + V + LV YA+ + A + FD + ++ +V W
Sbjct: 196 RRAEFELGRQVHGNMVKVG-VGNLIVESSLVYFYAQC-GELTSALRAFDMMEEK-DVISW 252
Query: 197 TSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFL--S 254
T++I+ ++ GHG + + +F M+ P T+ S+L ACS + + R V+ L
Sbjct: 253 TAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVK 312
Query: 255 ELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYV 314
+I G S D ++ K G + R+ FD +S R V W ++I+A+
Sbjct: 313 RMIKTDVFVGTSLMD--------MYAKCGEISDCRKVFDGMS---NRNTVTWTSIIAAHA 361
Query: 315 QDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNI 374
++G E +SLFRIM K N++T+VS+L AC +G L LGK +H +I K +I
Sbjct: 362 REGFGEEAISLFRIM-KRRHLIANNLTVVSILRACGSVGALLLGKELHAQII----KNSI 416
Query: 375 GSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYK 434
N + ++L+ +Y KCG A V + S+DVV + AMI G + G +AL +
Sbjct: 417 EKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKE 476
Query: 435 MPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEHY-ACYIDLLARVGC 493
M + G++PN T+ AL AC++S L GR I + +L+ + I + A+ G
Sbjct: 477 MIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGF 536
Query: 494 IEEAIEVVTSMPFKPNNFVWGALLGG 519
+ EA V SMP K N W A++ G
Sbjct: 537 VSEAFRVFDSMPEK-NLVSWKAMIMG 561
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 210/426 (49%), Gaps = 31/426 (7%)
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSV--SNGLVAVYARGFRNVVFARKVFDEIPDRSEVTC 195
S R +++HA K +D + N L++ R ++V+ARKVFD +P+++ VT
Sbjct: 95 SNGMRLIKRIHAMALKC--FDDQVIYFGNNLISSCVR-LGDLVYARKVFDSMPEKNTVT- 150
Query: 196 WTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTM-VSVLSACSSLEISKIERWVYFLS 254
WT++I GY + G +E LF V+ +R N+ M V +L+ CS ++ R V+
Sbjct: 151 WTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVH--G 208
Query: 255 ELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYV 314
++ N V + LVY + + G + + FD + ++ V+ W A+ISA
Sbjct: 209 NMVKVGVGNL-----IVESSLVYFYAQCGELTSALRAFDMME---EKDVISWTAVISACS 260
Query: 315 QDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNI 374
+ G ++ + +F M+ PN T+ S+L AC++ L G+ VH ++ K I
Sbjct: 261 RKGHGIKAIGMFIGMLNHWFL-PNEFTVCSILKACSEEKALRFGRQVHSLVV----KRMI 315
Query: 375 GSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYK 434
++ + TSL+DMY+KCG + ++VF+ +++ V + ++I A G GE+A+ LF
Sbjct: 316 KTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRI 375
Query: 435 MPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEHY--ACYIDLLARVG 492
M L N T + L AC G L G+++ + S+ Y + + L + G
Sbjct: 376 MKRRHLIANNLTVVSILRACGSVGALLLGKELHAQI-IKNSIEKNVYIGSTLVWLYCKCG 434
Query: 493 CIEEAIEVVTSMPFKPNNFVWGALLGGC--LLHSR--VELAQEVSKRLVEVDP-TSSGGY 547
+A V+ +P + + W A++ GC L H ++ +E+ + VE +P T S
Sbjct: 435 ESRDAFNVLQQLPSR-DVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSAL 493
Query: 548 VMLANA 553
AN+
Sbjct: 494 KACANS 499
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 101/202 (50%), Gaps = 8/202 (3%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHY----PPRIALRVFHYLHNPNIFPFNAIIRVLAEQG 104
++HA+I + ++ + + L+ Y R A V L + ++ + A+I + G
Sbjct: 406 ELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLG 465
Query: 105 HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSN 164
H S ++ + PN FT+S LK C S+ +H+ +K L++ V +
Sbjct: 466 HESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGS 525
Query: 165 GLVAVYAR-GFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQN 223
L+ +YA+ GF + F +VFD +P+++ V+ W ++I GYA++G E L+L + M +
Sbjct: 526 ALIHMYAKCGFVSEAF--RVFDSMPEKNLVS-WKAMIMGYARNGFCREALKLMYRMEAEG 582
Query: 224 LRPQNDTMVSVLSACSSLEISK 245
+ ++LS C +E+ +
Sbjct: 583 FEVDDYIFATILSTCGDIELDE 604
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 130/428 (30%), Positives = 212/428 (49%), Gaps = 48/428 (11%)
Query: 191 SEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSV-LSACSSLEISKIERW 249
+++ T ++ YA G+ E+ L LF M P + + S+ L +C++ R
Sbjct: 10 TKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAA-----AFRP 64
Query: 250 VYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAM 309
V S SN S + V L+ ++GK +V +R+ FD I +R V WNAM
Sbjct: 65 VLGGSVHAHSVKSNFLS-NPFVGCALLDMYGKCLSVSHARKLFDEIP---QRNAVVWNAM 120
Query: 310 ISAYVQDGCPVEGLSLFRIM------------------VKEGTTR--------------P 337
IS Y G E + L+ M ++G+ R P
Sbjct: 121 ISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKP 180
Query: 338 NHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRA 397
N +T+++++SAC+ IG L K +H Y + I + L + L++ Y +CG +
Sbjct: 181 NLITLLALVSACSAIGAFRLIKEIHSY----AFRNLIEPHPQLKSGLVEAYGRCGSIVYV 236
Query: 398 KEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHS 457
+ VF+ +DVV ++++I A++G+ E AL+ F +M + P+ FL L ACSH+
Sbjct: 237 QLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHA 296
Query: 458 GFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGA 515
G + F+ M + + +HY+C +D+L+RVG EEA +V+ +MP KP WGA
Sbjct: 297 GLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGA 356
Query: 516 LLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGI 575
LLG C + +ELA+ ++ L+ V+P + YV+L S + + LRL+M+E G+
Sbjct: 357 LLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGV 416
Query: 576 KKQPGSSW 583
K PGSSW
Sbjct: 417 KVSPGSSW 424
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 116/268 (43%), Gaps = 22/268 (8%)
Query: 2 LPLSLH-FTQKFKHCYLLPFRSSCSIVDHTPTTFTNLLQGHIPRSHLLQI--------HA 52
LPL H F+ K C FR H + +N L LL + HA
Sbjct: 44 LPLDAHVFSLALKSC-AAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHA 102
Query: 53 R-IFQLGAHQDNLLATRLIGHY----PPRIALRVFHYLH-NPNIFPFNAIIRVL--AEQG 104
R +F ++ ++ +I HY + A+ ++ + PN FNAII+ L E G
Sbjct: 103 RKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDG 162
Query: 105 HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSN 164
+ + + PN T L+ C R +++H++ + P + +
Sbjct: 163 SYRAI-EFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKS 221
Query: 165 GLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNL 224
GLV Y R ++V+ + VFD + DR +V W+SLI+ YA G E L+ F M +
Sbjct: 222 GLVEAYGRC-GSIVYVQLVFDSMEDR-DVVAWSSLISAYALHGDAESALKTFQEMELAKV 279
Query: 225 RPQNDTMVSVLSACSSLEISKIERWVYF 252
P + ++VL ACS ++ E VYF
Sbjct: 280 TPDDIAFLNVLKACSHAGLAD-EALVYF 306
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 142/519 (27%), Positives = 240/519 (46%), Gaps = 36/519 (6%)
Query: 30 TPTTFTNLLQGHIPRSHL---LQIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVF 82
T ++F +L+G L Q+H + G + + LI Y +A R+F
Sbjct: 214 TESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMF 273
Query: 83 HYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDAR 142
+ +I +NAII A+ + LF + +PN T+ +L V +
Sbjct: 274 QDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLS 333
Query: 143 CAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITG 202
C Q+H + K G + N L+ YA+ N+ +R FD I D++ + CW +L++G
Sbjct: 334 CGRQIHGMLIKNGCETGIVLGNALIDFYAK-CGNLEDSRLCFDYIRDKN-IVCWNALLSG 391
Query: 203 YAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWV---------YFL 253
YA G L LF M++ RP T + L +C E+ ++ + Y L
Sbjct: 392 YANK-DGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVL 450
Query: 254 SELIDDSTSNGESCHDSVNTV-----------LVYLFGKWGNVEKSRERFDRISAAGKRG 302
S L+ N + +D++ + L + G + + E IS +
Sbjct: 451 SSLMRSYAKN-QLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPD 509
Query: 303 VVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVH 362
V WN I+A + E + LF+ M+ + RP+ T VS+LS C+++ DL+LG +H
Sbjct: 510 TVSWNIAIAACSRSDYHEEVIELFKHML-QSNIRPDKYTFVSILSLCSKLCDLTLGSSIH 568
Query: 363 EYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVN 422
+ ++ + LIDMY KCG + +VFE K+++ + A+I L ++
Sbjct: 569 GLITKTDFSC---ADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIH 625
Query: 423 GEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM-SFSTSLTLEHY 481
G G++AL F + G +P+ +F+ L+AC H G ++ G +F+ M + ++HY
Sbjct: 626 GYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHY 685
Query: 482 ACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGC 520
C +DLLAR G ++EA ++ MPF + VW L GC
Sbjct: 686 RCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/382 (30%), Positives = 186/382 (48%), Gaps = 26/382 (6%)
Query: 77 IALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCF 136
+A +VF + N FN II+ ++ G V + +F+++++ PN T S LL
Sbjct: 67 LAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSC-- 124
Query: 137 RSKDARCAEQVHAHIQKMG-YLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTC 195
S D R Q+H K G ++ D V L+ +Y R + A +VF+++P +S T
Sbjct: 125 ASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGR-LDLLEMAEQVFEDMPFKSLET- 182
Query: 196 WTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACS---SLEISKIERWVYF 252
W +++ G +E + F +VR + + VL S L+ISK
Sbjct: 183 WNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISK------- 235
Query: 253 LSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISA 312
+L +T G C SV L+ +GK GN + F AG +V WNA+I A
Sbjct: 236 --QLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQD---AGSWDIVSWNAIICA 290
Query: 313 YVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKG 372
+ P++ L LF M + G + PN T VSVL + + LS G+ +H LI G +
Sbjct: 291 TAKSENPLKALKLFVSMPEHGFS-PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCET 349
Query: 373 NIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLF 432
I +L +LID Y+KCG L+ ++ F++ K++V +NA++ G A N +G L LF
Sbjct: 350 GI----VLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLF 404
Query: 433 YKMPEFGLQPNAGTFLGALSAC 454
+M + G +P TF AL +C
Sbjct: 405 LQMLQMGFRPTEYTFSTALKSC 426
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 189/402 (47%), Gaps = 28/402 (6%)
Query: 124 NDFTFSFLLKVCFRSKDARCAEQVHA-HIQKMGYLNDPS-VSNGLVAVYARGFRNVVFAR 181
ND S LL VC ++ + +HA I L P V N ++++Y + V A
Sbjct: 12 NDRVVS-LLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEK-LGEVSLAG 69
Query: 182 KVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSL 241
KVFD++P+R++V+ + ++I GY++ G ++ +F M P N + VS L +C+SL
Sbjct: 70 KVFDQMPERNKVS-FNTIIKGYSKYGDVDKAWGVFSEMRYFGYLP-NQSTVSGLLSCASL 127
Query: 242 EISKIERWVYFLSELIDDSTSNGESCHDS-VNTVLVYLFGKWGNVEKSRERFDRISAAGK 300
++ ++L S G D+ V T L+ L+G+ +E + + F+ +
Sbjct: 128 DVRAG-------TQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPF--- 177
Query: 301 RGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKW 360
+ + WN M+S G E + FR +V+ G + + + VL + + DL + K
Sbjct: 178 KSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTES-SFLGVLKGVSCVKDLDISKQ 236
Query: 361 VHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLA 420
+H S KG + + SLI Y KCG A+ +F+ A S D+V +NA+I A
Sbjct: 237 LH---CSATKKG-LDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATA 292
Query: 421 VNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQI---FRDMSFSTSLT 477
+ AL+LF MPE G PN GT++ L S L GRQI T +
Sbjct: 293 KSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIV 352
Query: 478 LEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGG 519
L + ID A+ G +E++ + K N W ALL G
Sbjct: 353 LGN--ALIDFYAKCGNLEDSRLCFDYIRDK-NIVCWNALLSG 391
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 146/541 (26%), Positives = 264/541 (48%), Gaps = 61/541 (11%)
Query: 82 FHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLA--------------PNDF- 126
F L N + N ++R + + +H LF++L R L+ PND
Sbjct: 10 FIRLGNVTVKSTNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTL 69
Query: 127 ----------------TFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVY 170
TF+ +L C QVHA + K G L+ +Y
Sbjct: 70 ALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMY 129
Query: 171 ARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDT 230
++ + ++V + +VF+ + ++ V+ W +L++G+ ++G G+E L +F M R+ + T
Sbjct: 130 SK-YGHLVDSVRVFESVEEKDLVS-WNALLSGFLRNGKGKEALGVFAAMYRERVEISEFT 187
Query: 231 MVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRE 290
+ SV+ C+SL+I + + V+ + + + T ++ + G + ++ +
Sbjct: 188 LSSVVKTCASLKILQQGKQVHAMVVVTGRDLV-------VLGTAMISFYSSVGLINEAMK 240
Query: 291 RFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACA 350
++ ++ V N++IS +++ E F +M ++ RPN + S L+ C+
Sbjct: 241 VYNSLNVHTDE--VMLNSLISGCIRNRNYKEA---FLLMSRQ---RPNVRVLSSSLAGCS 292
Query: 351 QIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVV 410
DL +GK +H + + S+ L L+DMY KCG++ +A+ +F SK VV
Sbjct: 293 DNSDLWIGKQIH----CVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVV 348
Query: 411 LFNAMIMGLAVNGEGEDALRLFYKMPE--FGLQPNAGTFLGALSACSHSGFLERGRQIFR 468
+ +MI AVNG+G AL +F +M E G+ PN+ TFL +SAC+H+G ++ G++ F
Sbjct: 349 SWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFG 408
Query: 469 DMSFSTSLT--LEHYACYIDLLARVGCIEEAIEVVTSMPFKPNN----FVWGALLGGCLL 522
M L EHY C+ID+L++ G EE +V M N +W A+L C L
Sbjct: 409 MMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSL 468
Query: 523 HSRVELAQEVSKRLV-EVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGS 581
+ + + V++RL+ E P ++ YV+++N A+ +W+ V LR +++ KG+ K G
Sbjct: 469 NMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGH 528
Query: 582 S 582
S
Sbjct: 529 S 529
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 165/370 (44%), Gaps = 34/370 (9%)
Query: 49 QIHARIFQLGAHQDNLLATRLIGHYPPR----IALRVFHYLHNPNIFPFNAIIRVLAEQG 104
Q+HA + + GA + T LI Y ++RVF + ++ +NA++ G
Sbjct: 105 QVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNG 164
Query: 105 HVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSN 164
+F + + ++FT S ++K C K + +QVHA + G + +
Sbjct: 165 KGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR-DLVVLGT 223
Query: 165 GLVAVYAR-GFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQN 223
+++ Y+ G N A KV++ + ++ SLI+G ++ + +E F +M RQ
Sbjct: 224 AMISFYSSVGLINE--AMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEA---FLLMSRQ- 277
Query: 224 LRPQNDTMVSVLSAC---SSLEISKIERWVYFLSELIDDST-SNGESCHDSVNTVLVYLF 279
RP + S L+ C S L I K V + + DS NG L+ ++
Sbjct: 278 -RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNG----------LMDMY 326
Query: 280 GKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGT-TRPN 338
GK G + ++R F I + + VV W +MI AY +G V+ L +FR M +EG+ PN
Sbjct: 327 GKCGQIVQARTIFRAIPS---KSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPN 383
Query: 339 HVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAK 398
VT + V+SACA G + GK E + K + ID+ SK G +
Sbjct: 384 SVTFLVVISACAHAGLVKEGK---ECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIW 440
Query: 399 EVFEHAVSKD 408
+ E + D
Sbjct: 441 RLVERMMEND 450
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 133/512 (25%), Positives = 237/512 (46%), Gaps = 52/512 (10%)
Query: 89 NIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVH 148
++F + A+I L G +F + + PN T + C K +VH
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVH 375
Query: 149 AHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGH 208
+ KMG+++D V N LV +Y++ + + ARKVFD + ++ +V W S+ITGY Q+G+
Sbjct: 376 SIAVKMGFIDDVLVGNSLVDMYSKCGK-LEDARKVFDSVKNK-DVYTWNSMITGYCQAGY 433
Query: 209 GEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCH 268
+ +LF M NLRP I W +S I
Sbjct: 434 CGKAYELFTRMQDANLRPN------------------IITWNTMISGYI----------- 464
Query: 269 DSVNTVLVYLFGKWGNVEKSRERFDRISAAGK--RGVVPWNAMISAYVQDGCPVEGLSLF 326
K G+ ++ + F R+ GK R WN +I+ Y+Q+G E L LF
Sbjct: 465 ------------KNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELF 512
Query: 327 RIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLID 386
R M + PN VT++S+L ACA + + + +H ++ + N+ + + +L D
Sbjct: 513 RKM-QFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVL----RRNLDAIHAVKNALTD 567
Query: 387 MYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGT 446
Y+K G ++ ++ +F +KD++ +N++I G ++G AL LF +M G+ PN GT
Sbjct: 568 TYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGT 627
Query: 447 FLGALSACSHSGFLERGRQIFRDMSFSTSL--TLEHYACYIDLLARVGCIEEAIEVVTSM 504
+ A G ++ G+++F ++ + LEH + + L R +EEA++ + M
Sbjct: 628 LSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEM 687
Query: 505 PFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVS 564
+ +W + L GC +H +++A ++ L ++P ++ +++ A +
Sbjct: 688 NIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSL 747
Query: 565 ALRLEMREKGIKKQPGSSWISVDGVVHEFLVG 596
R+ +KK G SWI V ++H F G
Sbjct: 748 EGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTG 779
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 133/503 (26%), Positives = 229/503 (45%), Gaps = 64/503 (12%)
Query: 32 TTFTNLLQGHIPRS--HLLQI-HARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHY 84
+T+ LL+ I HL +I HAR F L D + T+L+ Y A +VF
Sbjct: 82 STYLKLLESCIDSGSIHLGRILHAR-FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDS 140
Query: 85 LHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCA 144
+ N+F ++A+I + + V LF + + P+DF F +L+ C D
Sbjct: 141 MRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAG 200
Query: 145 EQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYA 204
+ +H+ + K+G + VSN ++AVYA+ + FA K F + +R +V W S++ Y
Sbjct: 201 KVIHSVVIKLGMSSCLRVSNSILAVYAK-CGELDFATKFFRRMRER-DVIAWNSVLLAYC 258
Query: 205 QSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNG 264
Q+G EE ++L M ++ + P + W
Sbjct: 259 QNGKHEEAVELVKEMEKEGISP------------------GLVTW--------------- 285
Query: 265 ESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG-KRGVVPWNAMISAYVQDGCPVEGL 323
+L+ + + G + + + ++ G V W AMIS + +G + L
Sbjct: 286 --------NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQAL 337
Query: 324 SLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATS 383
+FR M G PN VT++S +SAC+ + ++ G VH + +G ++ ++ S
Sbjct: 338 DMFRKMFLAGVV-PNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDV----LVGNS 392
Query: 384 LIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPN 443
L+DMYSKCG+L+ A++VF+ +KDV +N+MI G G A LF +M + L+PN
Sbjct: 393 LVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPN 452
Query: 444 AGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEHYACYIDLLA---RVGCIEEAIEV 500
T+ +S +G +F+ M + + A + ++A + G +EA+E+
Sbjct: 453 IITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQ-RNTATWNLIIAGYIQNGKKDEALEL 511
Query: 501 VTSMPFK---PNNFVWGALLGGC 520
M F PN+ +LL C
Sbjct: 512 FRKMQFSRFMPNSVTILSLLPAC 534
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 148/534 (27%), Positives = 243/534 (45%), Gaps = 106/534 (19%)
Query: 46 HLLQIHARIFQLGA-HQDNLLATRLIG-----HYPPRIALRVFHYLHNPNIFPFNAIIRV 99
L QIHA++ + + + A+R+I P +F + PN+F N++ +
Sbjct: 21 QLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKY 80
Query: 100 LAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLK------VCFRS--------KD----- 140
++ + V L+ + P+ F+F ++K + F++ KD
Sbjct: 81 FSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQALVEKLGFFKDPYVRN 140
Query: 141 -----------ARCAEQVHAHIQKM----------GY-----------LNDPSVSNGLVA 168
A +V I + GY L D N +V+
Sbjct: 141 VIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVS 200
Query: 169 --VYARGF---RNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQN 223
V GF +++ ARK FD +P++S V W ++++GYAQ+G E+ L+LF+ M+R
Sbjct: 201 WTVMITGFAKVKDLENARKYFDRMPEKS-VVSWNAMLSGYAQNGFTEDALRLFNDMLRLG 259
Query: 224 LRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSN------------GESCHDSV 271
+RP T V V+SACS + R L +LID+ C D
Sbjct: 260 VRPNETTWVIVISACSFRADPSLTR---SLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQ 316
Query: 272 N-----------------TVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYV 314
+ ++ + + G++ +R+ FD + KR VV WN++I+ Y
Sbjct: 317 SARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMP---KRNVVSWNSLIAGYA 373
Query: 315 QDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNI 374
+G + F M+ G ++P+ VTM+SVLSAC + DL LG + +Y+ K I
Sbjct: 374 HNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYI----RKNQI 429
Query: 375 GSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYK 434
N SLI MY++ G L AK VF+ +DVV +N + A NG+G + L L K
Sbjct: 430 KLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSK 489
Query: 435 MPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEHYACYIDLL 488
M + G++P+ T+ L+AC+ +G L+ G++IF+ S L +HYAC +DLL
Sbjct: 490 MKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFK--SIRNPLA-DHYAC-MDLL 539
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 155/411 (37%), Gaps = 103/411 (25%)
Query: 179 FARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSAC 238
+ R +FD + V S+ +++ +VL+L+ R + P + V+ +
Sbjct: 58 YTRLIFDSVT-FPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSA 116
Query: 239 SSLEI---SKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRI 295
I + +E+ +F V V++ ++ K +VE +R+ FD+I
Sbjct: 117 GRFGILFQALVEKLGFFKDPY--------------VRNVIMDMYVKHESVESARKVFDQI 162
Query: 296 SAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDL 355
S +R WN MIS Y + G E LF +M +
Sbjct: 163 S---QRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVV-------------------- 199
Query: 356 SLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAM 415
W T +I ++K L+ A++ F+ K VV +NAM
Sbjct: 200 ---SW---------------------TVMITGFAKVKDLENARKYFDRMPEKSVVSWNAM 235
Query: 416 IMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSG----------------- 458
+ G A NG EDALRLF M G++PN T++ +SACS
Sbjct: 236 LSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRV 295
Query: 459 ------------------FLERGRQIFRDMSFSTSLTLEHYACYIDLLARVGCIEEAIEV 500
++ R+IF ++ T L + I R+G + A ++
Sbjct: 296 RLNCFVKTALLDMHAKCRDIQSARRIFNEL--GTQRNLVTWNAMISGYTRIGDMSSARQL 353
Query: 501 VTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLA 551
+MP K N W +L+ G + + LA E + +++ + M++
Sbjct: 354 FDTMP-KRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMIS 403
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 169/317 (53%), Gaps = 11/317 (3%)
Query: 274 VLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEG 333
V++ G+ EK+ +++ R VV W +I Y + P E + LF MV
Sbjct: 194 VMITGLTNLGDFEKALCFLEKMP---NRTVVSWTTIIDGYARVDKPKEAILLFSRMVACD 250
Query: 334 TTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGR 393
+PN +T++++L A +GDL + VH Y +G +G + + + SLID Y+KCG
Sbjct: 251 AIKPNEITILAILPAVWNLGDLKMCGSVHAY---VGKRGFVPCDIRVTNSLIDAYAKCGC 307
Query: 394 LDRAKEVFEHAVS--KDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGAL 451
+ A + F + K++V + MI A++G G++A+ +F M GL+PN T + L
Sbjct: 308 IQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVL 367
Query: 452 SACSHSGFLERG-RQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKP 508
+ACSH G E + F M + + ++HY C +D+L R G +EEA ++ +P +
Sbjct: 368 NACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEE 427
Query: 509 NNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRL 568
VW LLG C ++ ELA+ V+++L+E++ + G YV+++N ++ D R
Sbjct: 428 KAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRK 487
Query: 569 EMREKGIKKQPGSSWIS 585
+M +G+ K PG S ++
Sbjct: 488 QMDVRGVAKLPGHSQVT 504
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 190/419 (45%), Gaps = 53/419 (12%)
Query: 89 NIFPFNAIIRVLAEQGHVSHVFSLFNDLK--------HRVLAPND-FTFSFLLKVCF--R 137
+F FN ++R + H + L++ L+ ++ L P D FT+ FLLK R
Sbjct: 76 KLFLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPR 135
Query: 138 SKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVT--- 194
+H K+G+ + V LV +Y G N++ A KVFDE+P+R+ VT
Sbjct: 136 FPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVG-GNMIDAHKVFDEMPERNPVTWNV 194
Query: 195 ---------------------------CWTSLITGYAQSGHGEEVLQLFHMMVRQN-LRP 226
WT++I GYA+ +E + LF MV + ++P
Sbjct: 195 MITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKP 254
Query: 227 QNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVE 286
T++++L A +L K+ V+ C V L+ + K G ++
Sbjct: 255 NEITILAILPAVWNLGDLKMCGSVHAYV-----GKRGFVPCDIRVTNSLIDAYAKCGCIQ 309
Query: 287 KSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVL 346
+ + F I G++ +V W MISA+ G E +S+F+ M + G +PN VTM+SVL
Sbjct: 310 SAFKFFIEI-PNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLG-LKPNRVTMISVL 367
Query: 347 SACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEV-FEHAV 405
+AC+ G L+ +++ E+ ++ ++ I + L+DM + GRL+ A+++ E +
Sbjct: 368 NACSH-GGLAEEEFL-EFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPI 425
Query: 406 SKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGR 464
+ V++ ++ +V + E A R+ K+ E L + C FL+ R
Sbjct: 426 EEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQR 484
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 141/484 (29%), Positives = 226/484 (46%), Gaps = 31/484 (6%)
Query: 27 VDHTPTTFTNLLQGHIPRSHL---LQIHARIFQLGAHQDNLLATRLIGHY----PPRIAL 79
VD + +N+ + S L L+ HA + G L T L+ Y +A
Sbjct: 210 VDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLAR 269
Query: 80 RVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDL-KHRVLAPNDFTFSFLLKVCFRS 138
RVF + +I + A+I LA LF + + PN + +L V
Sbjct: 270 RVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDV 329
Query: 139 KDARCAEQVHAHIQK-MGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWT 197
K + ++VHAH+ K Y+ P V +GL+ +Y + ++ R+VF R+ ++ WT
Sbjct: 330 KALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKC-GDMASGRRVFYGSKQRNAIS-WT 387
Query: 198 SLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWV--YFLSE 255
+L++GYA +G ++ L+ M ++ RP T+ +VL C+ L K + + Y L
Sbjct: 388 ALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKN 447
Query: 256 LIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQ 315
L + S + T L+ ++ K G E FDR+ +R V W AMI YV+
Sbjct: 448 LFLPNVS--------LVTSLMVMYSKCGVPEYPIRLFDRLE---QRNVKAWTAMIDCYVE 496
Query: 316 DGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIG 375
+ G+ +FR+M+ RP+ VTM VL+ C+ + L LGK +H +++ K
Sbjct: 497 NCDLRAGIEVFRLMLL-SKHRPDSVTMGRVLTVCSDLKALKLGKELHGHIL----KKEFE 551
Query: 376 SNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKM 435
S ++ +I MY KCG L A F+ K + + A+I N DA+ F +M
Sbjct: 552 SIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQM 611
Query: 436 PEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGC 493
G PN TF LS CS +GF++ + F M ++ + EHY+ I+LL R G
Sbjct: 612 VSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGR 671
Query: 494 IEEA 497
+EEA
Sbjct: 672 VEEA 675
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 188/410 (45%), Gaps = 25/410 (6%)
Query: 85 LHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCA 144
LH+ N + + I++ A Q ++ ++ + L+ R + N TFS LL+ C R K
Sbjct: 71 LHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHG 130
Query: 145 EQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYA 204
+QVH HI+ G ++ + LV +Y +V A+KVFDE S V W +L+ G
Sbjct: 131 KQVHVHIRINGLESNEFLRTKLVHMYT-ACGSVKDAQKVFDE-STSSNVYSWNALLRGTV 188
Query: 205 QSGHG--EEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTS 262
SG ++VL F M + ++ +V + + + + L+
Sbjct: 189 ISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALA------IK 242
Query: 263 NGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEG 322
NG + T LV ++ K G V +R FD I +R +V W AMI+ + E
Sbjct: 243 NGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIV---ERDIVVWGAMIAGLAHNKRQWEA 299
Query: 323 LSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILAT 382
L LFR M+ E PN V + ++L + L LGK VH +++ N + +
Sbjct: 300 LGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLK---SKNYVEQPFVHS 356
Query: 383 SLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQP 442
LID+Y KCG + + VF + ++ + + A++ G A NG + ALR M + G +P
Sbjct: 357 GLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRP 416
Query: 443 NAGTFLGALSACSHSGFLERGRQI---------FRDMSFSTSLTLEHYAC 483
+ T L C+ +++G++I ++S TSL + + C
Sbjct: 417 DVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKC 466
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 149/322 (46%), Gaps = 17/322 (5%)
Query: 80 RVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSK 139
RVF+ N + A++ A G ++ P+ T + +L VC +
Sbjct: 373 RVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELR 432
Query: 140 DARCAEQVHAHIQKMGYLNDPSVSNGLVAVYAR-GFRNVVFARKVFDEIPDRSEVTCWTS 198
+ +++H + K +L + S+ L+ +Y++ G + ++FD + R+ V WT+
Sbjct: 433 AIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPE--YPIRLFDRLEQRN-VKAWTA 489
Query: 199 LITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELID 258
+I Y ++ +++F +M+ RP + TM VL+ CS L+ K+ + EL
Sbjct: 490 MIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGK------ELHG 543
Query: 259 DSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGC 318
V+ ++ ++GK G++ + FD A +G + W A+I AY +
Sbjct: 544 HILKKEFESIPFVSARIIKMYGKCGDLRSANFSFD---AVAVKGSLTWTAIIEAYGCNEL 600
Query: 319 PVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQ 378
+ ++ F MV G T PN T +VLS C+Q G + ++ + N+ ++
Sbjct: 601 FRDAINCFEQMVSRGFT-PNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMY---NLQPSE 656
Query: 379 ILATSLIDMYSKCGRLDRAKEV 400
+ +I++ ++CGR++ A+ +
Sbjct: 657 EHYSLVIELLNRCGRVEEAQRL 678
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 127/272 (46%), Gaps = 14/272 (5%)
Query: 263 NGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCP--V 320
NG ++ + T LV+++ G+V+ +++ FD +++ V WNA++ V G
Sbjct: 140 NGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSN---VYSWNALLRGTVISGKKRYQ 196
Query: 321 EGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQIL 380
+ LS F M + G N ++ +V + A L G H I K + ++ L
Sbjct: 197 DVLSTFTEMRELGVDL-NVYSLSNVFKSFAGASALRQGLKTHALAI----KNGLFNSVFL 251
Query: 381 ATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKM-PEFG 439
TSL+DMY KCG++ A+ VF+ V +D+V++ AMI GLA N +AL LF M E
Sbjct: 252 KTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEK 311
Query: 440 LQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEHY--ACYIDLLARVGCIEEA 497
+ PN+ L L+ G+++ + S + + + + IDL + G +
Sbjct: 312 IYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASG 371
Query: 498 IEVVTSMPFKPNNFVWGALLGGCLLHSRVELA 529
V + N W AL+ G + R + A
Sbjct: 372 RRVFYGSK-QRNAISWTALMSGYAANGRFDQA 402
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 132/544 (24%), Positives = 263/544 (48%), Gaps = 34/544 (6%)
Query: 48 LQIHARIFQLGAHQDNLLATRLIGHYPP----RIALRVFHYLHNPNIFPFNAIIRVLAEQ 103
+Q+H R+ LG + + + L+G Y +AL++F + + N+ N ++R +
Sbjct: 132 IQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQT 191
Query: 104 GHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGY-LNDPSV 162
G +F ++ ++ +A N T+ ++++ C + +Q+H+ + K G+ +++ V
Sbjct: 192 GESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFV 251
Query: 163 SNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQ 222
+N LV Y+ ++ + + F+ +P++ +V W S+++ A G + L LF M
Sbjct: 252 ANVLVDYYS-ACGDLSGSMRSFNAVPEK-DVISWNSIVSVCADYGSVLDSLDLFSKMQFW 309
Query: 223 NLRPQNDTMVSVLSACSSLEISKIERWV--YFLSELIDDSTSNGESCHDSVNTVLVYLFG 280
RP +S L+ CS + + + Y L D S+ + V + L+ ++G
Sbjct: 310 GKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLH-------VQSALIDMYG 362
Query: 281 KWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHV 340
K +E S + + + N+++++ + G + + +F +M+ EGT + V
Sbjct: 363 KCNGIENSALLYQSLPCLN---LECCNSLMTSLMHCGITKDIIEMFGLMIDEGTG-IDEV 418
Query: 341 TMVSVLSACAQIGDLSLGKWVHEYLI--SIGHKGNIGSNQILATSLIDMYSKCGRLDRAK 398
T+ +VL A + LSL + +H + K ++ ++ SLID Y+K G+ + ++
Sbjct: 419 TLSTVLKALS----LSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSR 474
Query: 399 EVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSG 458
+VF+ + ++ ++I G A NG G D +++ +M L P+ T L LS CSHSG
Sbjct: 475 KVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSG 534
Query: 459 FLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGAL 516
+E G IF + + S + YAC +DLL R G +E+A ++ + W +L
Sbjct: 535 LVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSL 594
Query: 517 LGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLAN------ALASDRQWNDVSALRLEM 570
L C +H + + ++ L+ ++P + Y+ ++ RQ +++A R M
Sbjct: 595 LQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELM 654
Query: 571 REKG 574
RE G
Sbjct: 655 REIG 658
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 130/541 (24%), Positives = 235/541 (43%), Gaps = 64/541 (11%)
Query: 15 CYLLPFRSSCSIVDHTP-TTFTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHY 73
C L PF + TP F++ L+ + P S L+ H R NLL+
Sbjct: 21 CSLTPFIA-------TPRMDFSSFLEEN-P-SDLVYTHNRRIDELIKSGNLLS------- 64
Query: 74 PPRIALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLK 133
A F + ++ +N +I + G L+ ++ L + TF +L
Sbjct: 65 ----AHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLS 120
Query: 134 VCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEV 193
VC R QVH + +G+ + V + LV +YA R V A K+FDE+ DR+
Sbjct: 121 VCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYA-CLRLVDVALKLFDEMLDRNLA 179
Query: 194 TCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFL 253
C L+ + Q+G + + +++ M + + T ++ CS +R VY
Sbjct: 180 VC-NLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSH------DRLVYEG 232
Query: 254 SELIDDSTSNGESCHDS-VNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISA 312
+L +G + + V VLV + G++ S F+ A ++ V+ WN+++S
Sbjct: 233 KQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFN---AVPEKDVISWNSIVSV 289
Query: 313 YVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKG 372
G ++ L LF M G RP+ +S L+ C++ D+ GK +H Y++ +G
Sbjct: 290 CADYGSVLDSLDLFSKMQFWG-KRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGF-- 346
Query: 373 NIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLF 432
++ S + ++LIDMY KC ++ + +++ ++ N+++ L G +D + +F
Sbjct: 347 DVSSLHV-QSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMF 405
Query: 433 YKMPEFGL---QPNAGTFLGALS--------ACS--HSGFLERGRQIFRDMSFSTSLTLE 479
M + G + T L ALS +C+ H ++ G D++ S SL
Sbjct: 406 GLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAA--DVAVSCSL--- 460
Query: 480 HYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEV 539
ID + G E + +V + PN F +++ G ++R + + K L E+
Sbjct: 461 -----IDAYTKSGQNEVSRKVFDELD-TPNIFCLTSIING---YARNGMGTDCVKMLREM 511
Query: 540 D 540
D
Sbjct: 512 D 512
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 149/558 (26%), Positives = 258/558 (46%), Gaps = 80/558 (14%)
Query: 93 FNAIIRVLAEQGHVS---HVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHA 149
++ I+ LA G + L ND + P+ LL+V Q+H
Sbjct: 24 WSTIVPALARFGSIGVLRAAVELINDGEK----PDASPLVHLLRVSGNYGYVSLCRQLHG 79
Query: 150 HIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHG 209
++ K G++++ +SN L+ Y + ++ A KVFDE+PD +V W SL++GY QSG
Sbjct: 80 YVTKHGFVSNTRLSNSLMRFY-KTSDSLEDAHKVFDEMPD-PDVISWNSLVSGYVQSGRF 137
Query: 210 EEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHD 269
+E + LF + R ++ P + + L+AC+ L +S + ++ S+L+ G
Sbjct: 138 QEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIH--SKLVKLGLEKGNVV-- 193
Query: 270 SVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIM 329
V L+ ++GK G ++ + F + ++ V WNA++++ ++G GL F M
Sbjct: 194 -VGNCLIDMYGKCGFMDDAVLVFQHME---EKDTVSWNAIVASCSRNGKLELGLWFFHQM 249
Query: 330 ---------------VKEGT-----------TRPNHVTMVSVLSA---CAQIGDL----- 355
VK G PN + ++L+ + G+
Sbjct: 250 PNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFT 309
Query: 356 ---SLGKWVHEYLISI--------------------GHKGNIGSNQILATSLIDMYSKCG 392
S G EY +SI HK + S ++A++LIDMYSKCG
Sbjct: 310 KMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCG 369
Query: 393 RLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMP-EFGLQPNAGTFLGAL 451
L A+ +F K+++++N MI G A NG+ +A++LF ++ E L+P+ TFL L
Sbjct: 370 MLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLL 429
Query: 452 SACSHSGF-LERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKP 508
+ CSH +E F M + ++EH I + + G + +A +V+ F
Sbjct: 430 AVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGY 489
Query: 509 NNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGG--YVMLANALASDRQWNDVSAL 566
+ W ALLG C ++ A+ V+ +++E+ Y++++N A +W +V +
Sbjct: 490 DGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQI 549
Query: 567 RLEMREKGIKKQPGSSWI 584
R MRE G+ K+ GSSWI
Sbjct: 550 RKIMRESGVLKEVGSSWI 567
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 132/410 (32%), Positives = 206/410 (50%), Gaps = 42/410 (10%)
Query: 129 SFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIP 188
S+ L+ C + +Q+H I K ND + L++V + F +A VF+++
Sbjct: 24 SYFLRTC---SNFSQLKQIHTKIIKHNLTNDQLLVRQLISV-SSSFGETQYASLVFNQLQ 79
Query: 189 DRSEVTCWTSLITGYAQSGHGEEVLQLF-HMMVRQNLRPQNDTMVSVLSAC---SSLEI- 243
S T W +I + + E L LF MM+ + T V+ AC SS+ +
Sbjct: 80 SPSTFT-WNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLG 138
Query: 244 ---------SKIERWVYFLSELID-----DSTSNGESCHD-----SVNTVLVYLFGKWGN 284
+ V+F + L+D +G D S+ + L+G N
Sbjct: 139 TQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSN 198
Query: 285 --VEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTM 342
++ + F+++ R VV W AMI+AYV++ P E LFR M + +PN T+
Sbjct: 199 SQLDSAEIVFNQMPM---RNVVSWTAMITAYVKNRRPDEAFQLFRRM-QVDDVKPNEFTI 254
Query: 343 VSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFE 402
V++L A Q+G LS+G+WVH+Y HK + L T+LIDMYSKCG L A++VF+
Sbjct: 255 VNLLQASTQLGSLSMGRWVHDY----AHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFD 310
Query: 403 HAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFG-LQPNAGTFLGALSACSHSGFLE 461
K + +N+MI L V+G GE+AL LF +M E ++P+A TF+G LSAC+++G ++
Sbjct: 311 VMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVK 370
Query: 462 RGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPN 509
G + F M + S EH AC I LL + +E+A +V SM P+
Sbjct: 371 DGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 173/380 (45%), Gaps = 50/380 (13%)
Query: 45 SHLLQIHARIFQLGAHQDNLLATRLIG----HYPPRIALRVFHYLHNPNIFPFNAIIRVL 100
S L QIH +I + D LL +LI + A VF+ L +P+ F +N +IR L
Sbjct: 34 SQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSL 93
Query: 101 AEQGHVSHVFSLFNDLKHRVLAPND-FTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLND 159
+ LF + + D FTF F++K C S R QVH K G+ ND
Sbjct: 94 SVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFND 153
Query: 160 PSVSNGLVAVYARGFRNVVFARKVFDEIPDRS---------------------------- 191
N L+ +Y + + RKVFD++P RS
Sbjct: 154 VFFQNTLMDLYFKCGKPDS-GRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMP 212
Query: 192 --EVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERW 249
V WT++IT Y ++ +E QLF M +++P T+V++L A + L + RW
Sbjct: 213 MRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRW 272
Query: 250 VYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAM 309
V+ D + NG + T L+ ++ K G+++ +R+ FD + + + WN+M
Sbjct: 273 VH------DYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQG---KSLATWNSM 323
Query: 310 ISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLG-----KWVHEY 364
I++ GC E LSLF M +E + P+ +T V VLSACA G++ G + + Y
Sbjct: 324 ITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVY 383
Query: 365 LISIGHKGNIGSNQILATSL 384
IS + N Q+L +L
Sbjct: 384 GISPIREHNACMIQLLEQAL 403
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 105/251 (41%), Gaps = 39/251 (15%)
Query: 306 WNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYL 365
WN MI + + P E L LF +M+ ++ + T V+ AC + LG VH
Sbjct: 86 WNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLA 145
Query: 366 ISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGE- 424
I G ++ +L+D+Y KCG+ D ++VF+ + +V + M+ GL N +
Sbjct: 146 IKAGFFNDV----FFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQL 201
Query: 425 ------------------------------GEDALRLFYKMPEFGLQPNAGTFLGALSAC 454
++A +LF +M ++PN T + L A
Sbjct: 202 DSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAS 261
Query: 455 SHSGFLERGRQIFRDMSFSTSLTLEHY--ACYIDLLARVGCIEEAIEVVTSMPFKPNNFV 512
+ G L GR + D + L+ + ID+ ++ G +++A +V M K +
Sbjct: 262 TQLGSLSMGRWV-HDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGK-SLAT 319
Query: 513 WGALLGGCLLH 523
W +++ +H
Sbjct: 320 WNSMITSLGVH 330
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 131/513 (25%), Positives = 235/513 (45%), Gaps = 45/513 (8%)
Query: 98 RVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSF----LLKVCFRSKDARCAEQVHAHIQK 153
+++ + ++H+F + R++ +F S LLK R D+ ++ I K
Sbjct: 27 KLVEDSNSITHLF----QVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGK 82
Query: 154 MGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLI--TGYAQSG---H 208
+ Y +P LV+ + F F +PD S I T SG H
Sbjct: 83 L-YCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCH 141
Query: 209 GEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCH 268
G+ + ++ P ++++ + + C +L+++K F+ D S
Sbjct: 142 GQAIKHGCDQVL-----PVQNSLMHMYTCCGALDLAK----KLFVEIPKRDIVS------ 186
Query: 269 DSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRI 328
N+++ + + G+V + + FD + + ++ WN MISAY+ P +SLFR
Sbjct: 187 --WNSIIAGMV-RNGDVLAAHKLFDEMP---DKNIISWNIMISAYLGANNPGVSISLFRE 240
Query: 329 MVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMY 388
MV+ G + N T+V +L+AC + L G+ VH LI + + S+ ++ T+LIDMY
Sbjct: 241 MVRAGF-QGNESTLVLLLNACGRSARLKEGRSVHASLI----RTFLNSSVVIDTALIDMY 295
Query: 389 SKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFL 448
KC + A+ +F+ ++ V +N MI+ ++G E L LF M L+P+ TF+
Sbjct: 296 GKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFV 355
Query: 449 GALSACSHSGFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMP- 505
G L C+ +G + +G+ + M F H C +L + G EEA E + ++P
Sbjct: 356 GVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPD 415
Query: 506 --FKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDV 563
P + W LL L + ++K L+E DP + Y +L N + +W DV
Sbjct: 416 EDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDV 475
Query: 564 SALRLEMREKGIKKQPGSSWISVDGVVHEFLVG 596
+ +R ++E+ I + PG + + +VH +G
Sbjct: 476 NRVREMVKERKIGRIPGCGLVDLKEIVHGLRLG 508
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 92/223 (41%), Gaps = 19/223 (8%)
Query: 17 LLPFRSSCSIVDHTPTTFTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPPR 76
L+ + C +D F IP+ ++ ++ I + + D L A +L P +
Sbjct: 159 LMHMYTCCGALDLAKKLFV-----EIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDK 213
Query: 77 IALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCF 136
NI +N +I + SLF ++ N+ T LL C
Sbjct: 214 ------------NIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACG 261
Query: 137 RSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCW 196
RS + VHA + + + + L+ +Y + + V AR++FD + R++VT W
Sbjct: 262 RSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGK-CKEVGLARRIFDSLSIRNKVT-W 319
Query: 197 TSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACS 239
+I + G E L+LF M+ LRP T V VL C+
Sbjct: 320 NVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCA 362
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 124/259 (47%), Gaps = 8/259 (3%)
Query: 337 PNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDR 396
P+ V + +CA + L K VH++ + +G+ N ++ I M+ +C +
Sbjct: 234 PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMV----ISMFGECSSITD 289
Query: 397 AKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSH 456
AK VF+H V KD+ ++ M+ + NG G+DAL LF +M + GL+PN TFL AC+
Sbjct: 290 AKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACAT 349
Query: 457 SGFLERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWG 514
G +E F M S EHY + +L + G + EA + + +PF+P W
Sbjct: 350 VGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWE 409
Query: 515 ALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALR--LEMRE 572
A+ LH ++L + + +V+VDP+ + + S ++ N V++ LE R
Sbjct: 410 AMRNYARLHGDIDLEDYMEELMVDVDPSKAVINKIPTPPPKSFKETNMVTSKSRILEFRN 469
Query: 573 KGIKKQPGSSWISVDGVVH 591
K + GVV+
Sbjct: 470 LTFYKDEAKEMAAKKGVVY 488
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Query: 123 PNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARK 182
P+ F L + C K +++VH H + + DP ++N +++++ ++ A++
Sbjct: 234 PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGE-CSSITDAKR 292
Query: 183 VFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSL 241
VFD + D+ ++ W ++ Y+ +G G++ L LF M + L+P +T ++V AC+++
Sbjct: 293 VFDHMVDK-DMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATV 350
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 121/517 (23%), Positives = 222/517 (42%), Gaps = 59/517 (11%)
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
P+I FN ++ +A+ V SL ++ + +T++ L+ R A +
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 148 HAHIQKMGYLNDPSVS--NGLVAVYARGFRNVVFARKVFDEIPD---RSEVTCWTSLITG 202
+ K+GY +PS+ + L+ Y G R + A + D++ + R + +T+LI G
Sbjct: 143 LGKMMKLGY--EPSIVTLSSLLNGYCHGKR-ISDAVALVDQMVEMGYRPDTITFTTLIHG 199
Query: 203 YAQSGHGEEVLQLFHMMVRQNLRP--------------QNDTMVSVLSACSSLEISKIER 248
E + L MV++ +P + DT ++ L+ + +E +KIE
Sbjct: 200 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA-LNLLNKMEAAKIEA 258
Query: 249 WVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKR-GVVPWN 307
V + +ID K+ +V+ + F + G R VV ++
Sbjct: 259 DVVIFNTIIDS-------------------LCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 308 AMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLIS 367
++IS G + L M+ E PN VT +++ A + G + +++ +I
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMI-EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI- 357
Query: 368 IGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKD----VVLFNAMIMGLAVNG 423
K +I + SL++ + RLD+AK++FE VSKD VV +N +I G +
Sbjct: 358 ---KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414
Query: 424 EGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM-SFSTSLTLEHYA 482
ED LF +M GL + T+ + H G + +++F+ M S + Y+
Sbjct: 415 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 474
Query: 483 CYIDLLARVGCIEEAIEVVTSM---PFKPNNFVWGALLGGCLLHSRVELAQEV--SKRLV 537
+D L G +E+A+EV M K + +++ ++ G +V+ ++ S L
Sbjct: 475 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 534
Query: 538 EVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKG 574
V P Y + + L S R + AL +M+E G
Sbjct: 535 GVKPNVV-TYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 109/460 (23%), Positives = 187/460 (40%), Gaps = 72/460 (15%)
Query: 33 TFTNLLQG---HIPRSHLLQIHARIFQLGAHQDNLLA-----TRLIGHYPPRIALRVFHY 84
TFT L+ G H S + + R+ Q G Q NL+ L +AL + +
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGC-QPNLVTYGVVVNGLCKRGDTDLALNLLNK 250
Query: 85 LH----NPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLK-VCFRSK 139
+ ++ FN II L + HV +LF +++ + + PN T+S L+ +C +
Sbjct: 251 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 310
Query: 140 DARCAEQVHAHIQKMGYLNDPSVS-NGLVAVYARGFRNVVFARKVFDEIPDRS---EVTC 195
+ ++ + I+K +N V+ N L+ + + + V A K++D++ RS ++
Sbjct: 311 WSDASQLLSDMIEKK--INPNLVTFNALIDAFVKEGK-FVEAEKLYDDMIKRSIDPDIFT 367
Query: 196 WTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSE 255
+ SL+ G+ ++ Q+F MV ++ P
Sbjct: 368 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP----------------------------- 398
Query: 256 LIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRG-VVPWNAMISAYV 314
D T N L+ F K VE E F +S G G V + +I
Sbjct: 399 --DVVTYN----------TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 315 QDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNI 374
DG +F+ MV +G P+ +T +L G L V +Y+ K I
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVP-PDIMTYSILLDGLCNNGKLEKALEVFDYM----QKSEI 501
Query: 375 GSNQILATSLIDMYSKCGRLDRAKEVF----EHAVSKDVVLFNAMIMGLAVNGEGEDALR 430
+ + T++I+ K G++D ++F V +VV +N MI GL ++A
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561
Query: 431 LFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM 470
L KM E G PN+GT+ + A G ++ R+M
Sbjct: 562 LLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 136/317 (42%), Gaps = 21/317 (6%)
Query: 87 NPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLK-VCFRSKDARCAE 145
NPN+ FNA+I ++G L++D+ R + P+ FT++ L+ C + + A+
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK-AK 385
Query: 146 QVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDR---SEVTCWTSLITG 202
Q+ + D N L+ + + R V ++F E+ R + +T+LI G
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKR-VEDGTELFREMSHRGLVGDTVTYTTLIQG 444
Query: 203 YAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSA-CSSLEISKIERWVYFLSELIDDST 261
G + ++F MV + P T +L C++ K+E+ + E+ D
Sbjct: 445 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN---GKLEKAL----EVFDYMQ 497
Query: 262 SNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG-KRGVVPWNAMISAYVQDGCPV 320
+ + T ++ K G V+ + F +S G K VV +N MIS
Sbjct: 498 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 557
Query: 321 EGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQIL 380
E +L + M KE PN T +++ A + GD + + + S G+ + ++
Sbjct: 558 EAYALLKKM-KEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 616
Query: 381 ATSLIDMYSKCGRLDRA 397
A L D GRLD++
Sbjct: 617 ANMLHD-----GRLDKS 628
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 124/295 (42%), Gaps = 6/295 (2%)
Query: 303 VVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVH 362
+V +++++ Y + ++L MV+ G RP+ +T +++ S +
Sbjct: 155 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGY-RPDTITFTTLIHGLFLHNKASEAVALV 213
Query: 363 EYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVN 422
+ ++ G + N+ + ++ L L+ ++ + DVV+FN +I L
Sbjct: 214 DRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKY 273
Query: 423 GEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM-SFSTSLTLEHY 481
+DAL LF +M G++PN T+ +S G Q+ DM + L +
Sbjct: 274 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 333
Query: 482 ACYIDLLARVGCIEEAIEVVTSM---PFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVE 538
ID + G EA ++ M P+ F + +L+ G +H R++ A+++ + +V
Sbjct: 334 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS 393
Query: 539 VDP-TSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHE 592
D Y L ++ D + L EM +G+ + + G+ H+
Sbjct: 394 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 448
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 121/531 (22%), Positives = 228/531 (42%), Gaps = 58/531 (10%)
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
P+IF FN ++ +A+ V SL ++ ++ N +T++ L+ R A +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 148 HAHIQKMGYLNDPSVS--NGLVAVYARGFRNVVFARKVFDEIPD---RSEVTCWTSLITG 202
+ K+GY +PS+ + L+ Y G R + A + D++ + R + +T+LI G
Sbjct: 68 LGKMMKLGY--EPSIVTLSSLLNGYCHGKR-ISDAVALVDQMVEMGYRPDTITFTTLIHG 124
Query: 203 YAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSAC-------------SSLEISKIERW 249
E + L MV++ +P T V++ + +E +KIE
Sbjct: 125 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD 184
Query: 250 VYFLSELIDDSTSNGESCHDSVN------------TVLVYL--------FGKWGNVEKSR 289
V + +ID S D++N V+ Y +G+W + S+
Sbjct: 185 VVIFNTIID-SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA--SQ 241
Query: 290 ERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSAC 349
D I +V +NA+I A+V++G VE L M+K + P+ T S+++
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR-SIDPDIFTYNSLINGF 300
Query: 350 AQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEH----AV 405
L K + E+++S ++ + +LI + K R++ E+F +
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDT----YNTLIKGFCKSKRVEDGTELFREMSHRGL 356
Query: 406 SKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQ 465
D V + +I GL +G+ ++A ++F +M G+ P+ T+ L ++G LE+ +
Sbjct: 357 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 416
Query: 466 IFRDMSFS-TSLTLEHYACYIDLLARVGCIEEAIEVVTSMPF---KPNNFVWGALLGGCL 521
+F M S L + Y I+ + + G +++ ++ S+ KPN + ++ G
Sbjct: 417 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 476
Query: 522 LHSRVELAQEVSKRLVEVDPT-SSGGYVMLANALASDRQWNDVSALRLEMR 571
++ A + K++ E P SG Y L A D + L EMR
Sbjct: 477 SKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 527
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 135/317 (42%), Gaps = 21/317 (6%)
Query: 87 NPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLK-VCFRSKDARCAE 145
NPN+ FNA+I ++G L +D+ R + P+ FT++ L+ C + + A+
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK-AK 310
Query: 146 QVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDR---SEVTCWTSLITG 202
Q+ + D N L+ + + R V ++F E+ R + +T+LI G
Sbjct: 311 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKR-VEDGTELFREMSHRGLVGDTVTYTTLIQG 369
Query: 203 YAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSA-CSSLEISKIERWVYFLSELIDDST 261
G + ++F MV + P T +L C++ K+E+ + E+ D
Sbjct: 370 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN---GKLEKAL----EVFDYMQ 422
Query: 262 SNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG-KRGVVPWNAMISAYVQDGCPV 320
+ + T ++ K G V+ + F +S G K VV +N MIS
Sbjct: 423 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 482
Query: 321 EGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQIL 380
E +L + M KE P+ T +++ A + GD + + + S G+ + ++
Sbjct: 483 EAYALLKKM-KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 541
Query: 381 ATSLIDMYSKCGRLDRA 397
A L D GRLD++
Sbjct: 542 ANMLHD-----GRLDKS 553
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 126/299 (42%), Gaps = 14/299 (4%)
Query: 303 VVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVH 362
+V +++++ Y + ++L MV+ G RP+ +T +++ S +
Sbjct: 80 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGY-RPDTITFTTLIHGLFLHNKASEAVALV 138
Query: 363 EYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEH----AVSKDVVLFNAMIMG 418
+ ++ G + N+ + ++ L K G +D A + + DVV+FN +I
Sbjct: 139 DRMVQRGCQPNLVTYGVVVNGL----CKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDS 194
Query: 419 LAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM-SFSTSLT 477
L +DAL LF +M G++PN T+ +S G Q+ DM +
Sbjct: 195 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 254
Query: 478 LEHYACYIDLLARVGCIEEAIEVVTSM---PFKPNNFVWGALLGGCLLHSRVELAQEVSK 534
L + ID + G EA ++ M P+ F + +L+ G +H R++ A+++ +
Sbjct: 255 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 314
Query: 535 RLVEVDPTSS-GGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHE 592
+V D Y L ++ D + L EM +G+ + + G+ H+
Sbjct: 315 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 373
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 128/276 (46%), Gaps = 27/276 (9%)
Query: 349 CAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKD 408
C + L K VH + + ++ SN +L ++MYS CG + A VFE K+
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVL----LEMYSNCGLANEAASVFEKMSEKN 319
Query: 409 VVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFR 468
+ + +I A NG GEDA+ +F + E G P+ F G AC G ++ G F
Sbjct: 320 LETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFE 379
Query: 469 DMS--FSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRV 526
MS + + ++E Y +++ A G ++EA+E V MP +PN VW L+ +H +
Sbjct: 380 SMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNL 439
Query: 527 ELAQEVSKRLVEVDPT-----SSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGS 581
EL ++ + +DPT S G++ + ASD + ++ +KK+ G
Sbjct: 440 ELGDYCAEVVEFLDPTRLNKQSREGFIPVK---ASD------------VEKESLKKRSG- 483
Query: 582 SWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHM 617
V + EF G + P+ + ++ L L HM
Sbjct: 484 ILHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHM 519
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 130/288 (45%), Gaps = 36/288 (12%)
Query: 340 VTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKE 399
+ ++ + C + L + VHE +I++ ++G+ ++I+MYS C +D A +
Sbjct: 120 IRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARN----AIIEMYSGCCSVDDALK 175
Query: 400 VFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGF 459
VFE + M+ NG GE+A+ LF + E G +PN F S C+ +G
Sbjct: 176 VFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGD 235
Query: 460 LERGRQIFRDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALL 517
++ G F+ M + ++EHY +LA G ++EA+ V MP +P+ VW L+
Sbjct: 236 VKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLM 295
Query: 518 GGCLLHSRVELAQEVSKRLVEVDPT-----SSGGYVMLANALASDRQWNDVSALRLEMRE 572
+H VEL ++ + ++D T SS G L ASD +E
Sbjct: 296 NLSRVHGDVELGDRCAELVEKLDATRLDKVSSAG---LVATKASD----------FVKKE 342
Query: 573 KGIKKQP--GSSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHMK 618
+ +P S++ VD SHPQ+ IY TL L +K
Sbjct: 343 PSTRSEPYFYSTFRPVDS----------SHPQMNIIYETLMSLRSQLK 380
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 116/503 (23%), Positives = 213/503 (42%), Gaps = 53/503 (10%)
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
P+IF FN ++ +A+ V SL ++ ++ N +T++ L+ R A +
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 148 HAHIQKMGYLNDPSVS--NGLVAVYARGFRNVVFARKVFDEIPD---RSEVTCWTSLITG 202
+ K+GY +PS+ + L+ Y G R + A + D++ + R + +T+LI G
Sbjct: 143 LGKMMKLGY--EPSIVTLSSLLNGYCHGKR-ISDAVALVDQMVEMGYRPDTITFTTLIHG 199
Query: 203 YAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSA-------------CSSLEISKIERW 249
E + L MV++ +P T V++ + +E +KIE
Sbjct: 200 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAN 259
Query: 250 VYFLSELIDDSTSNGESCHDSVN------------TVLVY--LFGKWGNVEK----SRER 291
V S +I DS D++N V+ Y L N E+ SR
Sbjct: 260 VVIYSTVI-DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLL 318
Query: 292 FDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQ 351
D I VV +NA+I A+V++G VE L+ M+K + P+ T S+++
Sbjct: 319 SDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCM 377
Query: 352 IGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVF----EHAVSK 407
L K + E +IS + N + +LI+ + K R+D E+F + +
Sbjct: 378 HDRLDEAKHMFELMIS----KDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG 433
Query: 408 DVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIF 467
+ V + +I G + ++A +F +M G+ PN T+ L +G LE+ +F
Sbjct: 434 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 493
Query: 468 RDMSFST-SLTLEHYACYIDLLARVGCIEEAIEVVTSMPF---KPNNFVWGALLGGCLLH 523
+ S T+ Y I+ + + G +E+ ++ S+ KP+ ++ ++ G
Sbjct: 494 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRK 553
Query: 524 SRVELAQEVSKRLVEVDPTSSGG 546
E A + +++ E P G
Sbjct: 554 GLKEEADALFRKMREDGPLPDSG 576
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 180/435 (41%), Gaps = 70/435 (16%)
Query: 33 TFTNLLQG---HIPRSHLLQIHARIFQLGAHQDNLLATRLIGHYPPRIALRVFHYLHNP- 88
TFT L+ G H S + + R+ Q G + + ++ R + + L N
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 251
Query: 89 -------NIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLK-VCFRSKD 140
N+ ++ +I L + H +LF +++++ + PN T+S L+ +C +
Sbjct: 252 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERW 311
Query: 141 ARCAEQVHAHIQKMGYLNDPSVS-NGLVAVYARGFRNVVFARKVFDEIPDRS---EVTCW 196
+ + + I++ +N V+ N L+ + + + +V A K++DE+ RS ++ +
Sbjct: 312 SDASRLLSDMIERK--INPNVVTFNALIDAFVKEGK-LVEAEKLYDEMIKRSIDPDIFTY 368
Query: 197 TSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSEL 256
+SLI G+ +E +F +M+ ++ P T ++++
Sbjct: 369 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING------------------- 409
Query: 257 IDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRG-VVPWNAMISAYVQ 315
F K +++ E F +S G G V + +I + Q
Sbjct: 410 ----------------------FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Query: 316 DGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIG 375
+F+ MV +G PN +T ++L + G L V EYL + I
Sbjct: 448 ARDCDNAQMVFKQMVSDGV-HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 506
Query: 376 SNQILATSLIDMYSKCGRLDRAKEVF----EHAVSKDVVLFNAMIMGLAVNGEGEDALRL 431
+ I+ I+ K G+++ ++F V DV+++N MI G G E+A L
Sbjct: 507 TYNIM----IEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADAL 562
Query: 432 FYKMPEFGLQPNAGT 446
F KM E G P++GT
Sbjct: 563 FRKMREDGPLPDSGT 577
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 105/463 (22%), Positives = 195/463 (42%), Gaps = 31/463 (6%)
Query: 33 TFTNLLQGHIPRSHL---LQIHARIFQLGAHQDNLLATRLIGHY------PPRIAL--RV 81
++ L+ RS L L + ++ +LG D + + L+ Y +AL ++
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 82 FHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDA 141
F + PN FN +I L S +L + + R P+ FT+ ++ + D
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 142 RCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPD---RSEVTCWTS 198
A + ++K D + ++ ++NV A +F E+ + R V + S
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALC-NYKNVNDALNLFTEMDNKGIRPNVVTYNS 295
Query: 199 LITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELID 258
LI G + +L M+ + + P T +++ A ++ K+ E+I
Sbjct: 296 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA--FVKEGKLVEAEKLYDEMIK 353
Query: 259 DSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFD-RISAAGKRGVVPWNAMISAYVQDG 317
S + S L+ F +++++ F+ IS VV +N +I + +
Sbjct: 354 RSIDPDIFTYSS----LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 318 CPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSN 377
EG+ LFR M + G N VT +++ Q GD + + + + ++S G +I
Sbjct: 410 RVEEGMELFREMSQRGLV-GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI--- 465
Query: 378 QILATSLIDMYSKCGRLDRAKEVFEH----AVSKDVVLFNAMIMGLAVNGEGEDALRLFY 433
I + L+D K G+L++A VFE+ + D+ +N MI G+ G+ ED LF
Sbjct: 466 -ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524
Query: 434 KMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSL 476
+ G++PN + +S G E +FR+M +L
Sbjct: 525 SLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 125/533 (23%), Positives = 222/533 (41%), Gaps = 56/533 (10%)
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
P+I FN ++ +A+ V SL +++ ++ + ++++ L+ R A V
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 148 HAHIQKMGYLNDPSVSNGLVAVYARGFR---NVVFARKVFDEIPDRSEVTCWTSLITGYA 204
+ K+GY D + L+ Y G R V ++F + VT + +LI G
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVT-FNTLIHGLF 196
Query: 205 QSGHGEEVLQLFHMMVRQNLRPQNDTMVSV-------------LSACSSLEISKIERWVY 251
E + L MV + +P T +V LS +E KIE V
Sbjct: 197 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 256
Query: 252 FLSELIDDSTSNGESCHDSVN------------TVLVY--------LFGKWGNVEKSRER 291
+ +I D+ N ++ +D++N V+ Y +G+W + SR
Sbjct: 257 IYTTII-DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA--SRLL 313
Query: 292 FDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQ 351
D I VV ++A+I A+V++G VE L+ M+K + P+ T S+++
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCM 372
Query: 352 IGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVF----EHAVSK 407
L K + E +IS + N + +LI + K R++ E+F + +
Sbjct: 373 HDRLDEAKHMFELMIS----KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 428
Query: 408 DVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIF 467
+ V +N +I GL G+ + A ++F KM G+ P+ T+ L G LE+ +F
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 488
Query: 468 RDMSFST-SLTLEHYACYIDLLARVGCIEEAIEVVTSMPF---KPNNFVWGALLGGCLLH 523
+ S + Y I+ + + G +E+ ++ S+ KPN ++ ++ G
Sbjct: 489 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548
Query: 524 SRVELAQEVSKRLVEVDPT--SSGGYVMLANALASDRQWNDVSALRLEMREKG 574
E A + + + E D T +SG Y L A D + L EMR G
Sbjct: 549 GLKEEADALFREMKE-DGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 140/316 (44%), Gaps = 19/316 (6%)
Query: 87 NPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLK-VCFRSKDARCAE 145
NPN+ F+A+I ++G + L++++ R + P+ FT+S L+ C +
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 381
Query: 146 QVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEV---TCWTSLITG 202
I K + N + N L+ + + R V ++F E+ R V + +LI G
Sbjct: 382 MFELMISKDCFPNVVTY-NTLIKGFCKAKR-VEEGMELFREMSQRGLVGNTVTYNTLIQG 439
Query: 203 YAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTS 262
Q+G + ++F MV + P T +L + K+E+ + L S
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC--KYGKLEKALVVFEYL---QKS 494
Query: 263 NGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG-KRGVVPWNAMISAYVQDGCPVE 321
E + N +++ K G VE + F +S G K V+ + MIS + + G E
Sbjct: 495 KMEPDIYTYN-IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553
Query: 322 GLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILA 381
+LFR M ++GT PN T +++ A + GD + + + + S G G+ + ++
Sbjct: 554 ADALFREMKEDGTL-PNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 612
Query: 382 TSLIDMYSKCGRLDRA 397
L D GRL+++
Sbjct: 613 NMLHD-----GRLEKS 623
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 121/532 (22%), Positives = 217/532 (40%), Gaps = 54/532 (10%)
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
P+I FN ++ +A+ V SL ++ ++ + +T+S + R A V
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 148 HAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPD---RSEVTCWTSLITGYA 204
A + K+GY D + L+ Y R + A + D++ + + + +T+LI G
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKR-ISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 205 QSGHGEEVLQLFHMMVRQNLRPQNDTMVSV-------------LSACSSLEISKIERWVY 251
E + L MV++ +P T +V LS +E KIE V
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 259
Query: 252 FLSELIDDSTSNGESCHDSVN------------TVLVYL--------FGKWGNVEKSRER 291
+ +I D + D++N V Y +G+W + SR
Sbjct: 260 IYNTII-DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA--SRLL 316
Query: 292 FDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQ 351
D I VV ++A+I A+V++G VE L+ M+K + P+ T S+++
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCM 375
Query: 352 IGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVF----EHAVSK 407
L K + E +IS + N + ++LI + K R++ E+F + +
Sbjct: 376 HDRLDEAKHMFELMIS----KDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG 431
Query: 408 DVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIF 467
+ V + +I G + ++A +F +M G+ PN T+ L +G L + +F
Sbjct: 432 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 491
Query: 468 RDMSFST-SLTLEHYACYIDLLARVGCIEEAIEVVTSMPFK---PNNFVWGALLGGCLLH 523
+ ST + Y I+ + + G +E+ E+ ++ K PN + ++ G
Sbjct: 492 EYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRK 551
Query: 524 SRVELAQEVSKRLVEVDP-TSSGGYVMLANALASDRQWNDVSALRLEMREKG 574
E A + K++ E P +SG Y L A D + L EMR G
Sbjct: 552 GSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCG 603
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 138/317 (43%), Gaps = 21/317 (6%)
Query: 87 NPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLK-VCFRSKDARCAE 145
NPN+ F+A+I ++G + L++++ R + P+ FT+S L+ C +
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 384
Query: 146 QVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEV---TCWTSLITG 202
I K + N + S L+ + + R V ++F E+ R V +T+LI G
Sbjct: 385 MFELMISKDCFPNVVTYST-LIKGFCKAKR-VEEGMELFREMSQRGLVGNTVTYTTLIHG 442
Query: 203 YAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSA-CSSLEISKIERWVYFLSELIDDST 261
+ Q+ + +F MV + P T +L C + +++K V F E + ST
Sbjct: 443 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA--MVVF--EYLQRST 498
Query: 262 SNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG-KRGVVPWNAMISAYVQDGCPV 320
+ +++ K G VE E F +S G V+ +N MIS + + G
Sbjct: 499 MEPDI---YTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKE 555
Query: 321 EGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQIL 380
E SL + M KE PN T +++ A + GD + + + S G G+ + ++
Sbjct: 556 EADSLLKKM-KEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 614
Query: 381 ATSLIDMYSKCGRLDRA 397
L D GRLD++
Sbjct: 615 TNMLHD-----GRLDKS 626
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 107/511 (20%), Positives = 204/511 (39%), Gaps = 60/511 (11%)
Query: 71 GHYPPRIALRVFHYLH----NPNIFPFNAIIRVLAEQGHV-SHVFSLFNDLKHRVLAPND 125
G Y R A+ VF + P + +N I+ V + G + + SL +K +AP+
Sbjct: 222 GRY--REAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDA 279
Query: 126 FTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFD 185
+T++ L+ C R + A QV ++ G+ D N L+ VY + R A KV +
Sbjct: 280 YTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE-AMKVLN 338
Query: 186 EIPDRS---EVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLE 242
E+ + + SLI+ YA+ G +E ++L + M + +P T ++LS
Sbjct: 339 EMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFE--R 396
Query: 243 ISKIERWVYFLSELIDDSTSNGESCHDSVNT--VLVYLFGKWGNVEKSRERFDRISAAG- 299
K+E + E+ C ++ T + ++G G + + FD I+ G
Sbjct: 397 AGKVESAMSIFEEM------RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGL 450
Query: 300 KRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEG--TTRPNHVTMVSVLSACAQI----- 352
+V WN +++ + Q+G E +F+ M + G R T++S S C
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510
Query: 353 -----------GDLSL-----------GKWVH-EYLISIGHKGNIGSNQILATSLIDMYS 389
DLS G W E +++ G N++ SL+ Y+
Sbjct: 511 VYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA 570
Query: 390 KCGRL----DRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAG 445
+ A+EV+ + VL +++ + +A R F ++ E G P+
Sbjct: 571 NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDIT 630
Query: 446 TFLGALSACSHSGFLERGRQIF---RDMSFSTSLTLEHYACYI-DLLARVGCIEEAIEVV 501
T +S + + + ++ F+ S+ + Y+ A G EE + +
Sbjct: 631 TLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI 690
Query: 502 TSMPFKPNNFVWGALLGGCLLHSRVELAQEV 532
+ KP+ + ++ ++R+ A +
Sbjct: 691 LAKGIKPDIISYNTVIYAYCRNTRMRDASRI 721
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/384 (20%), Positives = 163/384 (42%), Gaps = 28/384 (7%)
Query: 78 ALRVFHYLHN----PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLK 133
A+ +F + N PNI FNA I++ +G + + +F+++ L+P+ T++ LL
Sbjct: 403 AMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLA 462
Query: 134 VCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYAR--GFRNVVFA-RKVFDE--IP 188
V ++ V +++ G++ + N L++ Y+R F + R++ D P
Sbjct: 463 VFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTP 522
Query: 189 DRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIER 248
D ++ + +++ A+ G E+ ++ M +P L+ CS L +
Sbjct: 523 D---LSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE------LTYCSLLHAYANGK 573
Query: 249 WVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG-KRGVVPWN 307
+ + L ++ S + LV + K + ++ F + G + N
Sbjct: 574 EIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLN 633
Query: 308 AMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLIS 367
+M+S Y + + + M + G T P+ T S++ ++ D + + +++
Sbjct: 634 SMVSIYGRRQMVAKANGVLDYMKERGFT-PSMATYNSLMYMHSRSADFGKSEEILREILA 692
Query: 368 IGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEH----AVSKDVVLFNAMIMGLAVNG 423
G K +I I ++I Y + R+ A +F + DV+ +N I A +
Sbjct: 693 KGIKPDI----ISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADS 748
Query: 424 EGEDALRLFYKMPEFGLQPNAGTF 447
E+A+ + M + G +PN T+
Sbjct: 749 MFEEAIGVVRYMIKHGCRPNQNTY 772
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 190/438 (43%), Gaps = 32/438 (7%)
Query: 52 ARIFQLGAHQDNLLATRLI------GHYPPRIAL--RVFHYLHNPNIFPFNAIIRVLAEQ 103
+I +LG D + + LI G + L R+ H P + NA++ L
Sbjct: 131 GKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLN 190
Query: 104 GHVSHVFSLFNDLKHRVLAPNDFTFSFLLKV-CFRSKDARCAEQVHAHIQKMGYLNDPSV 162
G VS L + + PN+ T+ +LKV C + A E + ++ L+
Sbjct: 191 GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKY 250
Query: 163 SNGLVAVYARGFRNVVFARKVFDEIPDR---SEVTCWTSLITGYAQSGHGEEVLQLFHMM 219
S + + G + F +F+E+ + +++ +T+LI G+ +G ++ +L M
Sbjct: 251 SIIIDGLCKDGSLDNAF--NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308
Query: 220 VRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVN-TVLVYL 278
+++ + P + S L C E K+ E+I S D+V T L+
Sbjct: 309 IKRKITP-DVVAFSALIDCFVKE-GKLREAEELHKEMIQRGIS-----PDTVTYTSLIDG 361
Query: 279 FGKWGNVEKSRERFDRISAAG-KRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRP 337
F K ++K+ D + + G + +N +I+ Y + +GL LFR M G
Sbjct: 362 FCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV-A 420
Query: 338 NHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRA 397
+ VT +++ ++G L + K + + ++S + +I S +IL L D G ++A
Sbjct: 421 DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN----GEPEKA 476
Query: 398 KEVFEH----AVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSA 453
E+FE + D+ ++N +I G+ + +DA LF +P G++P+ T+ +
Sbjct: 477 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGG 536
Query: 454 CSHSGFLERGRQIFRDMS 471
G L +FR M
Sbjct: 537 LCKKGSLSEADLLFRKME 554
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 176/423 (41%), Gaps = 23/423 (5%)
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
P + F+ + V+A V L ++ + +A N +T S ++ C R + A
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 148 HAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFD---EIPDRSEVTCWTSLITGYA 204
I K+GY D + L+ R V A ++ D E+ + + +L+ G
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGR-VSEALELVDRMVEMGHKPTLITLNALVNGLC 188
Query: 205 QSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSA-CSSLEISKIERWVYFLSELIDDSTSN 263
+G + + L MV +P T VL C S + + EL+
Sbjct: 189 LNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA-------LAMELLRKMEER 241
Query: 264 GESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG-KRGVVPWNAMISAYVQDGCPVEG 322
++++ K G+++ + F+ + G K ++ + +I + G +G
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG 301
Query: 323 LSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILAT 382
L R M+K T P+ V +++ + G L + +H+ +I G I + + T
Sbjct: 302 AKLLRDMIKRKIT-PDVVAFSALIDCFVKEGKLREAEELHKEMIQRG----ISPDTVTYT 356
Query: 383 SLIDMYSKCGRLDRAKEVFEHAVSK----DVVLFNAMIMGLAVNGEGEDALRLFYKMPEF 438
SLID + K +LD+A + + VSK ++ FN +I G +D L LF KM
Sbjct: 357 SLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR 416
Query: 439 GLQPNAGTFLGALSACSHSGFLERGRQIFRDM-SFSTSLTLEHYACYIDLLARVGCIEEA 497
G+ + T+ + G LE +++F++M S + Y +D L G E+A
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKA 476
Query: 498 IEV 500
+E+
Sbjct: 477 LEI 479
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 113/545 (20%), Positives = 224/545 (41%), Gaps = 70/545 (12%)
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
PN++ F IRVL G ++ + + + P+ T++ L+ ++ CA++V
Sbjct: 256 PNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEV 315
Query: 148 HAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDE------IPDRSEVTCWTSLIT 201
++ + D L+ ++ R++ ++ + E +PD V +T L+
Sbjct: 316 FEKMKTGRHKPDRVTYITLLDRFSDN-RDLDSVKQFWSEMEKDGHVPD---VVTFTILVD 371
Query: 202 GYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDST 261
++G+ E +M Q + P T +++ C L + +++ + EL +
Sbjct: 372 ALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLI--CGLLRVHRLDDAL----ELFGNME 425
Query: 262 SNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG-KRGVVPWNAMISAYVQDGCPV 320
S G V + +GK G+ + E F+++ G +V NA + + + G
Sbjct: 426 SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDR 485
Query: 321 EGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQIL 380
E +F + G P+ VT ++ +++G++ + ++ G + ++ I+
Sbjct: 486 EAKQIFYGLKDIGLV-PDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDV----IV 540
Query: 381 ATSLIDMYSKCGRLDRAKEVF----EHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMP 436
SLI+ K R+D A ++F E + VV +N ++ GL NG+ ++A+ LF M
Sbjct: 541 VNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMV 600
Query: 437 EFGLQPNAGTFLGALSA-CSHS-----------------------------GFLERGRQI 466
+ G PN TF C + G ++ G Q+
Sbjct: 601 QKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNG-QV 659
Query: 467 FRDMSFSTSLTLEHYACYIDL------LARVGCIEEAIEVVTSMPF----KPNNFVWGAL 516
M F + Y ++ L + + IE+A +++T+ + +P N W L
Sbjct: 660 KEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDL 719
Query: 517 LGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALR--LEMREKG 574
+G L + ++ A S+RLV + G +L + + N+VS R E K
Sbjct: 720 IGSILAEAGIDNAVSFSERLV-ANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKD 778
Query: 575 IKKQP 579
+ QP
Sbjct: 779 LGVQP 783
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 97/467 (20%), Positives = 184/467 (39%), Gaps = 98/467 (20%)
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRS---KDA--- 141
P++F +N II L + G V F+ +K +++ P+ T LL ++ +DA
Sbjct: 641 PDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKI 699
Query: 142 ------RCAEQ---------VHAHIQKMGYLNDPSVSNGLVA---------------VYA 171
CA+Q + + + + G N S S LVA Y+
Sbjct: 700 ITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYS 759
Query: 172 RGFRNVVFARKVFDE------------------------------------------IPD 189
NV AR +F++ IPD
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819
Query: 190 RSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERW 249
V + L+ Y +SG +E+ +L+ M T V+S ++ ++
Sbjct: 820 ---VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGL--VKAGNVDDA 874
Query: 250 VYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKR-GVVPWNA 308
+ +L+ D + +C L+ K G + ++++ F+ + G R +N
Sbjct: 875 LDLYYDLMSDRDFSPTAC---TYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNI 931
Query: 309 MISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISI 368
+I+ + + G +LF+ MVKEG RP+ T ++ +G + G +H Y +
Sbjct: 932 LINGFGKAGEADAACALFKRMVKEGV-RPDLKTYSVLVDCLCMVGRVDEG--LH-YFKEL 987
Query: 369 GHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEH-----AVSKDVVLFNAMIMGLAVNG 423
G + + + +I+ K RL+ A +F ++ D+ +N++I+ L + G
Sbjct: 988 KESG-LNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAG 1046
Query: 424 EGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM 470
E+A +++ ++ GL+PN TF + S SG E +++ M
Sbjct: 1047 MVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 157/370 (42%), Gaps = 37/370 (10%)
Query: 96 IIRVLAEQGHVSHVFSLFNDL-KHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKM 154
IIR + +VS +LF K + P T++ L+ + A+ V ++
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814
Query: 155 GYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLIT------GYAQSGH 208
G + D + N L+ Y + + ++F+ + S C + IT G ++G+
Sbjct: 815 GCIPDVATYNFLLDAYGKSGK----IDELFELYKEMSTHECEANTITHNIVISGLVKAGN 870
Query: 209 GEEVLQLFH-MMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESC 267
++ L L++ +M ++ P T ++ +SK R +Y +L + G
Sbjct: 871 VDDALDLYYDLMSDRDFSPTACTYGPLIDG-----LSKSGR-LYEAKQLFEGMLDYGCRP 924
Query: 268 HDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKR-GVVPWNAMISAYVQDGCPVEGLSLF 326
+ ++ +L+ FGK G + + F R+ G R + ++ ++ G EGL F
Sbjct: 925 NCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYF 984
Query: 327 RIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGK--WVHEYLISIGH-KGNIGSNQILAT- 382
+ + KE P+ V +++ LGK + E L+ K + G L T
Sbjct: 985 KEL-KESGLNPDVVCYNLIING--------LGKSHRLEEALVLFNEMKTSRGITPDLYTY 1035
Query: 383 -SLIDMYSKCGRLDRAKEVFEH----AVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPE 437
SLI G ++ A +++ + +V FNA+I G +++G+ E A ++ M
Sbjct: 1036 NSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVT 1095
Query: 438 FGLQPNAGTF 447
G PN GT+
Sbjct: 1096 GGFSPNTGTY 1105
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 117/258 (45%), Gaps = 14/258 (5%)
Query: 285 VEKSRERFDRISAAG-KRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMV 343
+E +++ F ++ + G V +N ++ AY + G E L++ M N +T
Sbjct: 801 IEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTH-ECEANTITHN 859
Query: 344 SVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFE- 402
V+S + G++ ++ L+S + LID SK GRL AK++FE
Sbjct: 860 IVISGLVKAGNVDDALDLYYDLMS---DRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEG 916
Query: 403 ---HAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGF 459
+ + ++N +I G GE + A LF +M + G++P+ T+ + G
Sbjct: 917 MLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 976
Query: 460 LERGRQIFRDMSFS-TSLTLEHYACYIDLLARVGCIEEAI----EVVTSMPFKPNNFVWG 514
++ G F+++ S + + Y I+ L + +EEA+ E+ TS P+ + +
Sbjct: 977 VDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYN 1036
Query: 515 ALLGGCLLHSRVELAQEV 532
+L+ + VE A ++
Sbjct: 1037 SLILNLGIAGMVEEAGKI 1054
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 177/372 (47%), Gaps = 27/372 (7%)
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
PN+ +N ++ Q ++ +F+++ + L PN++T+S L+ CFR+ D + A +V
Sbjct: 476 PNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEV 535
Query: 148 HAH-----IQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTC--WTSLI 200
H I+ G + ++ NGL V + A + ++ R V+C + S+I
Sbjct: 536 VNHMTSSNIEVNGVVYQ-TIINGLCKVGQTSKARELLANMIEEK---RLCVSCMSYNSII 591
Query: 201 TGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDS 260
G+ + G + + + M + P T S+++ + K R L E+ D+
Sbjct: 592 DGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNG-----LCKNNRMDQAL-EMRDEM 645
Query: 261 TSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVP-WNAMISAYVQDGCP 319
+ G L+ F K N+E + F + G P +N++IS + G
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNM 705
Query: 320 VEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQI 379
V L L++ M+K+G R + T +++ + G+L L ++ + ++G + ++I
Sbjct: 706 VAALDLYKKMLKDG-LRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVG----LVPDEI 760
Query: 380 LATSLIDMYSKCGRLDRAKEVFE----HAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKM 435
+ T +++ SK G+ + ++FE + V+ +V+++NA+I G G ++A RL +M
Sbjct: 761 IYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEM 820
Query: 436 PEFGLQPNAGTF 447
+ G+ P+ TF
Sbjct: 821 LDKGILPDGATF 832
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 117/534 (21%), Positives = 224/534 (41%), Gaps = 63/534 (11%)
Query: 89 NIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVH 148
N+ ++I + + LF+ ++ +PN TFS L++ ++ + A + +
Sbjct: 338 NVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFY 397
Query: 149 AHIQKMGYLNDPSV--SNGLVAVYARGFRNVVFARKVFDEIPDR--SEVTCWTSLITGYA 204
++ +G PSV + ++ + +G ++ A K+FDE + + V ++++
Sbjct: 398 KKMEVLGLT--PSVFHVHTIIQGWLKGQKHEE-ALKLFDESFETGLANVFVCNTILSWLC 454
Query: 205 QSGHGEEVLQLFHMMVRQNLRPQ----NDTMVSVLSAC--SSLEISKI------ERWV-- 250
+ G +E +L M + + P N+ M L C ++++++I E+ +
Sbjct: 455 KQGKTDEATELLSKMESRGIGPNVVSYNNVM---LGHCRQKNMDLARIVFSNILEKGLKP 511
Query: 251 --YFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNA 308
Y S LID N HD N + V N+E + GVV +
Sbjct: 512 NNYTYSILIDGCFRN----HDEQNALEVVNHMTSSNIEVN-------------GVV-YQT 553
Query: 309 MISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISI 368
+I+ + G + L M++E + ++ S++ + G++ +E +
Sbjct: 554 IINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGN 613
Query: 369 GHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSK----DVVLFNAMIMGLAVNGE 424
G I N I TSL++ K R+D+A E+ + +K D+ + A+I G
Sbjct: 614 G----ISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSN 669
Query: 425 GEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM-SFSTSLTLEHYAC 483
E A LF ++ E GL P+ + +S + G + +++ M L Y
Sbjct: 670 MESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTT 729
Query: 484 YIDLLARVGCIEEAIEVVTSMP---FKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVD 540
ID L + G + A E+ T M P+ ++ ++ G L + + + V K E+
Sbjct: 730 LIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNG--LSKKGQFVK-VVKMFEEMK 786
Query: 541 PTSSGGYVMLANALASD--RQWNDVSALRL--EMREKGIKKQPGSSWISVDGVV 590
+ V++ NA+ + R+ N A RL EM +KGI + I V G V
Sbjct: 787 KNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQV 840
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 95/525 (18%), Positives = 216/525 (41%), Gaps = 65/525 (12%)
Query: 33 TFTNLLQGHIPRSHL---LQIHARIFQLGAHQDNLLATRLI-GHYPPR---IALRVFHYL 85
T+T+++ + + ++ +++ + G + + AT LI GH AL +F +
Sbjct: 306 TYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKM 365
Query: 86 H----NPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDA 141
+PN F+ +I + G + + ++ L P+ F +++ +
Sbjct: 366 EKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKG--- 422
Query: 142 RCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVF-----------ARKVFDEIPDR 190
Q H K L D S GL V+ N + A ++ ++ R
Sbjct: 423 ----QKHEEALK---LFDESFETGLANVFVC---NTILSWLCKQGKTDEATELLSKMESR 472
Query: 191 S---EVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSAC--SSLEISK 245
V + +++ G+ + + + +F ++ + L+P N T ++ C + E +
Sbjct: 473 GIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNA 532
Query: 246 IERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGV-- 303
+E +++ TS+ + V ++ K G K+RE + + V
Sbjct: 533 LE--------VVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSC 584
Query: 304 VPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHE 363
+ +N++I + ++G ++ + M G + PN +T S+++ + + + +
Sbjct: 585 MSYNSIIDGFFKEGEMDSAVAAYEEMCGNGIS-PNVITYTSLMNGLCKNNRMDQALEMRD 643
Query: 364 YLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAK----EVFEHAVSKDVVLFNAMIMGL 419
+ + G K +I + +LID + K ++ A E+ E ++ ++N++I G
Sbjct: 644 EMKNKGVKLDIPA----YGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGF 699
Query: 420 AVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLE 479
G AL L+ KM + GL+ + GT+ + G L +++ +M + L +
Sbjct: 700 RNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQ-AVGLVPD 758
Query: 480 H--YACYIDLLARVGCIEEAIEVVTSMP---FKPNNFVWGALLGG 519
Y ++ L++ G + +++ M PN ++ A++ G
Sbjct: 759 EIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAG 803
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 113/498 (22%), Positives = 192/498 (38%), Gaps = 85/498 (17%)
Query: 87 NPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQ 146
NP+ +N I++ ++++G +S + L D+K L PN T++ L+
Sbjct: 237 NPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLV-------------- 282
Query: 147 VHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQS 206
GY S+ V NV +PD + + LI G +
Sbjct: 283 -------YGYCKLGSLKEAFQIVELMKQTNV---------LPD---LCTYNILINGLCNA 323
Query: 207 GHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGES 266
G E L+L M L+P T +++ C L +S R + + ++ +D +
Sbjct: 324 GSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKL--MEQMENDGVKANQV 381
Query: 267 CHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLF 326
H+ + KW E+ RE R V++ + G S
Sbjct: 382 THN--------ISLKWLCKEEKREAVTR------------------KVKELVDMHGFS-- 413
Query: 327 RIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLID 386
P+ VT +++ A ++GDLS E + +G KG I N I +++D
Sbjct: 414 ----------PDIVTYHTLIKAYLKVGDLS---GALEMMREMGQKG-IKMNTITLNTILD 459
Query: 387 MYSKCGRLDRAKEVFEHAVSK----DVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQP 442
K +LD A + A + D V + +IMG + E AL ++ +M + + P
Sbjct: 460 ALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITP 519
Query: 443 NAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEHYACYIDL-LARVGCIEEAIEVV 501
TF + H G E + F +++ S L + I L + G +E+A E
Sbjct: 520 TVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFY 579
Query: 502 TSM---PFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLANALASDR 558
FKP+N+ LL G E A L+E + Y + +A D+
Sbjct: 580 NESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDK 639
Query: 559 QWNDVSALRLEMREKGIK 576
+ + L EM EKG++
Sbjct: 640 KLKEAYDLLSEMEEKGLE 657
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 108/276 (39%), Gaps = 47/276 (17%)
Query: 200 ITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDD 259
++ Y G LQ+F M+R L+P L C++L I + F
Sbjct: 138 LSAYLHEGKPHVALQIFQKMIRLKLKPN-------LLTCNTLLIGLVRYPSSF------- 183
Query: 260 STSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG-KRGVVPWNAMISAYVQDGC 318
++ +RE FD + G V +N +++ Y +G
Sbjct: 184 ------------------------SISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGK 219
Query: 319 PVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQ 378
+ L + MV E P++VT ++L A ++ G LS + E L+ + G + N+
Sbjct: 220 LEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLS---DLKELLLDMKKNG-LVPNR 275
Query: 379 ILATSLIDMYSKCGRLDRAKEVFE----HAVSKDVVLFNAMIMGLAVNGEGEDALRLFYK 434
+ +L+ Y K G L A ++ E V D+ +N +I GL G + L L
Sbjct: 276 VTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDA 335
Query: 435 MPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM 470
M LQP+ T+ + C G R++ M
Sbjct: 336 MKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQM 371
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/406 (19%), Positives = 159/406 (39%), Gaps = 24/406 (5%)
Query: 78 ALRVFHYLHNPNIFP----FNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLK 133
A ++ + N+ P +N +I L G + L + +K L P+ T++ L+
Sbjct: 294 AFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLID 353
Query: 134 VCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPD---- 189
CF + A ++ ++ G + N + + + RKV E+ D
Sbjct: 354 GCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKV-KELVDMHGF 412
Query: 190 RSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERW 249
++ + +LI Y + G L++ M ++ ++ T+ ++L A ER
Sbjct: 413 SPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCK------ERK 466
Query: 250 VYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVP-WNA 308
+ L++ + G + L+ F + VEK+ E +D + V +N+
Sbjct: 467 LDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNS 526
Query: 309 MISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISI 368
+I G + F + + G P+ T S++ + G + K Y SI
Sbjct: 527 LIGGLCHHGKTELAMEKFDELAESGLL-PDDSTFNSIILGYCKEGRVE--KAFEFYNESI 583
Query: 369 GHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSK---DVVLFNAMIMGLAVNGEG 425
H + + L++ K G ++A F + + D V +N MI + +
Sbjct: 584 KH--SFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKL 641
Query: 426 EDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMS 471
++A L +M E GL+P+ T+ +S G L ++ + S
Sbjct: 642 KEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFS 687
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 119/546 (21%), Positives = 219/546 (40%), Gaps = 85/546 (15%)
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
P+I FN ++ +A+ V SL ++ ++ + +T+S + R A V
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 148 HAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPD---RSEVTCWTSLITGYA 204
A + K+GY D + L+ Y R + A + D++ + + + +T+LI G
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKR-ISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 205 QSGHGEEVLQLFHMMVRQNLRPQNDTMVSV-------------LSACSSLEISKIERWVY 251
E + L MV++ +P T +V L+ + +E ++I+ V
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVV 259
Query: 252 FLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKR-GVVPWNAMI 310
+ +ID K+ +VE + + F + G R VV +N++I
Sbjct: 260 IFNTIIDS-------------------LCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300
Query: 311 SAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGH 370
+ G + L M+ E PN VT +++ A + G L + +HE +I
Sbjct: 301 NCLCNYGRWSDASRLLSNML-EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI---- 355
Query: 371 KGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKD----VVLFNAMIMGLAVNGEGE 426
+ +I + I LI+ + RLD AK++F+ VSKD + +N +I G E
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVE 415
Query: 427 DALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM---------------- 470
D + LF +M + GL N T+ + +G + + +F+ M
Sbjct: 416 DGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Query: 471 -------SFSTSLTLEH-------------YACYIDLLARVGCIEEAIEVVTSMPFKPNN 510
T+L + Y I+ + + G + EA ++ S+ KP+
Sbjct: 476 HGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDV 535
Query: 511 FVWGALLGGCLLHSRVELAQEVSKRLVEVDPT--SSGGYVMLANALASDRQWNDVSALRL 568
+ ++ G ++ A ++ +++ E D T +SG Y L A D + L
Sbjct: 536 VTYNTMISGLCSKRLLQEADDLFRKMKE-DGTLPNSGTYNTLIRANLRDCDRAASAELIK 594
Query: 569 EMREKG 574
EMR G
Sbjct: 595 EMRSSG 600
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 137/329 (41%), Gaps = 48/329 (14%)
Query: 87 NPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLK-VCFRSKDARCAE 145
NPN+ FNA+I ++G + L ++ R + P+ T++ L+ C ++ A+
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE-AK 383
Query: 146 QVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEV---TCWTSLITG 202
Q+ + L + N L+ + + R V ++F E+ R V +T++I G
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLINGFCKCKR-VEDGVELFREMSQRGLVGNTVTYTTIIQG 442
Query: 203 YAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVL--SACS------------SLEISKIER 248
+ Q+G + +F MV N P + S+L CS L+ S++E
Sbjct: 443 FFQAGDCDSAQMVFKQMV-SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501
Query: 249 WVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNA 308
++ + +I+ K G V ++ + F +S K VV +N
Sbjct: 502 NIFIYNTMIEG-------------------MCKAGKVGEAWDLFCSLSI--KPDVVTYNT 540
Query: 309 MISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISI 368
MIS E LFR M KE T PN T +++ A + D + + + + S
Sbjct: 541 MISGLCSKRLLQEADDLFRKM-KEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSS 599
Query: 369 GHKGNIGSNQILATSLIDMYSKCGRLDRA 397
G G+ + ++ L D GRLD++
Sbjct: 600 GFVGDASTISLVTNMLHD-----GRLDKS 623
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 121/528 (22%), Positives = 216/528 (40%), Gaps = 52/528 (9%)
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
P+I F+ ++ +A+ V SL +++ ++ N +T+S L+ R A V
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 148 HAHIQKMGYLNDPSVSNGLVAVYARGFR--NVVFARKVFDEIPDRSEVTCWTSLITGYAQ 205
A + K+GY D N L+ + G R + V E+ + + + +LI G +
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 206 SGHGEEVLQLFHMMVRQNLRPQNDTMVSV-------------LSACSSLEISKIERWVYF 252
E + L MV + +P T V LS +E KIE V
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 253 LSELIDDSTSNGESCHDSVN------------TVLVY--------LFGKWGNVEKSRERF 292
+ +I D+ N ++ +D++N V+ Y +G+W + SR
Sbjct: 259 YNTII-DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA--SRLLS 315
Query: 293 DRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQI 352
D I VV ++A+I A+V++G VE L+ M+K + P+ T S+++
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMH 374
Query: 353 GDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVF----EHAVSKD 408
L K + E +IS + N + +LI + K R+D E+F + + +
Sbjct: 375 DRLDEAKHMFELMIS----KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGN 430
Query: 409 VVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFR 468
V + +I G E ++A +F +M G+ P+ T+ L ++G +E +F
Sbjct: 431 TVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFE 490
Query: 469 DMSFST-SLTLEHYACYIDLLARVGCIEEAIEVVTSMPF---KPNNFVWGALLGGCLLHS 524
+ S + Y I+ + + G +E+ ++ S+ KPN + ++ G
Sbjct: 491 YLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 550
Query: 525 RVELAQEVSKRLVEVDP-TSSGGYVMLANALASDRQWNDVSALRLEMR 571
E A + + + E P SG Y L A D + L EMR
Sbjct: 551 LKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 598
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 101/463 (21%), Positives = 191/463 (41%), Gaps = 31/463 (6%)
Query: 27 VDHTPTTFTNLLQGHIPRSHL---LQIHARIFQLGAHQDNLLATRLIGHY--PPRIALRV 81
+ H T++ L+ RS L L + A++ +LG D + L+ + RI+ V
Sbjct: 112 ISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 171
Query: 82 ------FHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVC 135
+ P+ F FN +I L S +L + + + P+ T+ ++
Sbjct: 172 SLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL 231
Query: 136 FRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPD---RSE 192
+ D A + +++ + N ++ ++NV A +F E+ + R
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC-NYKNVNDALNLFTEMDNKGIRPN 290
Query: 193 VTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYF 252
V + SLI G + +L M+ + + P T +++ A ++ K+
Sbjct: 291 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA--FVKEGKLVEAEKL 348
Query: 253 LSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFD-RISAAGKRGVVPWNAMIS 311
E+I S + S L+ F +++++ F+ IS VV +N +I
Sbjct: 349 YDEMIKRSIDPDIFTYSS----LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 404
Query: 312 AYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHK 371
+ + EG+ LFR M + G N VT +++ Q + + V + ++S G
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLV-GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL 463
Query: 372 GNIGSNQILATSLIDMYSKCGRLDRAKEVFEH----AVSKDVVLFNAMIMGLAVNGEGED 427
+I + IL +D G+++ A VFE+ + D+ +N MI G+ G+ ED
Sbjct: 464 PDIMTYSIL----LDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519
Query: 428 ALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM 470
LF + G++PN T+ +S G E +FR+M
Sbjct: 520 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREM 562
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 187/459 (40%), Gaps = 70/459 (15%)
Query: 33 TFTNLLQG---HIPRSHLLQIHARIFQLGAHQD----NLLATRLIGHYPPRIALRVFHYL 85
TF L+ G H S + + R+ G D ++ L +A + + +
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 247
Query: 86 HN----PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLK-VCFRSKD 140
P + +N II L + H+ +LF +++ + + PN T+S L+ +C +
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Query: 141 ARCAEQVHAHIQKMGYLN-DPSVSNGLVAVYARGFRNVVFARKVFDEIPDRS---EVTCW 196
+ + + I++ +N D + L+ + + + +V A K++DE+ RS + +
Sbjct: 308 SDASRLLSDMIERK--INPDVFTFSALIDAFVKEGK-LVEAEKLYDEMVKRSIDPSIVTY 364
Query: 197 TSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSEL 256
+SLI G+ +E Q+F MV ++ P
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFP------------------------------ 394
Query: 257 IDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRG-VVPWNAMISAYVQ 315
D T N L+ F K+ VE+ E F +S G G V +N +I Q
Sbjct: 395 -DVVTYN----------TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 316 DGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIG 375
G +F+ MV +G PN +T ++L + G L V EYL + I
Sbjct: 444 AGDCDMAQEIFKEMVSDGVP-PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502
Query: 376 SNQILATSLIDMYSKCGRLDRAKEVFEH----AVSKDVVLFNAMIMGLAVNGEGEDALRL 431
+ I+ I+ K G+++ ++F + V DVV +N MI G G E+A L
Sbjct: 503 TYNIM----IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 432 FYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM 470
F +M E G PN+G + + A G E ++ ++M
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 121/534 (22%), Positives = 219/534 (41%), Gaps = 58/534 (10%)
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
P+I F+ ++ +A+ V SL +++ + N +T+S L+ R A V
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 148 HAHIQKMGYLNDPSVSNGLVAVYARGFR---NVVFARKVFDEIPDRSEVTCWTSLITGYA 204
+ K+GY + + L+ Y R V ++F + VT + +LI G
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVT-FNTLIHGLF 197
Query: 205 QSGHGEEVLQLFHMMVRQNLRP--------------QNDTMVSVLSACSSLEISKIERWV 250
E + L MV + +P + DT ++ + + +E K+E V
Sbjct: 198 LHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA-FNLLNKMEQGKLEPGV 256
Query: 251 YFLSELIDDSTSNGESCHDSVN------------TVLVYL--------FGKWGNVEKSRE 290
+ +I D + D++N V+ Y +G+W + SR
Sbjct: 257 LIYNTII-DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA--SRL 313
Query: 291 RFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACA 350
D I V ++A+I A+V++G VE L+ MVK + P+ VT S+++
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR-SIDPSIVTYSSLINGFC 372
Query: 351 QIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVF----EHAVS 406
L K + E+++S + + + +LI + K R++ EVF + +
Sbjct: 373 MHDRLDEAKQMFEFMVS----KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 428
Query: 407 KDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQI 466
+ V +N +I GL G+ + A +F +M G+ PN T+ L +G LE+ +
Sbjct: 429 GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV 488
Query: 467 FRDMSFST-SLTLEHYACYIDLLARVGCIEEAIEVVTSMPF---KPNNFVWGALLGGCLL 522
F + S T+ Y I+ + + G +E+ ++ ++ KP+ + ++ G
Sbjct: 489 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548
Query: 523 HSRVELAQEVSKRLVEVDPT--SSGGYVMLANALASDRQWNDVSALRLEMREKG 574
E A + K + E D T +SG Y L A D + L EMR G
Sbjct: 549 KGSKEEADALFKEMKE-DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 116/524 (22%), Positives = 215/524 (41%), Gaps = 81/524 (15%)
Query: 86 HNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAE 145
+ P++ ++ ++ G + V+ L +K + L PN + + ++ + R AE
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 146 QVHAHIQKMGYLNDPSVSNGLVAVYA-RGFRNVVFARKVFDEIPDRS---EVTCWTSLIT 201
+ + + + G L D V L+ + RG ++ A K F E+ R +V +T++I+
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRG--DIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 202 GYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDST 261
G+ Q G E +LFH M + L P + T +ELI
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVT----------------------FTELI---- 428
Query: 262 SNGESCHDSVNTVLVYLFGKWGNVEKS-RERFDRISAAGKRGVVPWNAMISAYVQDGCPV 320
NG + K G+++ + R I A VV + +I ++G
Sbjct: 429 -NG--------------YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 321 EGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLG-KWVHEYLISIGHKGNIGSNQI 379
L M K G +PN T S+++ + G++ K V E+ + ++ +
Sbjct: 474 SANELLHEMWKIGL-QPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-----EAAGLNADTV 527
Query: 380 LATSLIDMYSKCGRLDRAKEVFEHAVSK----DVVLFNAMIMGLAVNGEGEDALRLFYKM 435
T+L+D Y K G +D+A+E+ + + K +V FN ++ G ++G ED +L M
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 436 PEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM-SFSTSLTLEHYACYIDLLARVGCI 494
G+ PNA TF + L+ I++DM S + Y + + +
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Query: 495 EEAIEVVTSMP---FKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLA 551
+EA + M F + + L+ G L + A+EV + M
Sbjct: 648 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ-------------MRR 694
Query: 552 NALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLV 595
LA+D++ D + + + KG K+P + +D ++ +LV
Sbjct: 695 EGLAADKEIFDFFS---DTKYKG--KRPDTIVDPIDEIIENYLV 733
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 116/524 (22%), Positives = 215/524 (41%), Gaps = 81/524 (15%)
Query: 86 HNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAE 145
+ P++ ++ ++ G + V+ L +K + L PN + + ++ + R AE
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 146 QVHAHIQKMGYLNDPSVSNGLVAVYA-RGFRNVVFARKVFDEIPDRS---EVTCWTSLIT 201
+ + + + G L D V L+ + RG ++ A K F E+ R +V +T++I+
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRG--DIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 202 GYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDST 261
G+ Q G E +LFH M + L P + T +ELI
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVT----------------------FTELI---- 428
Query: 262 SNGESCHDSVNTVLVYLFGKWGNVEKS-RERFDRISAAGKRGVVPWNAMISAYVQDGCPV 320
NG + K G+++ + R I A VV + +I ++G
Sbjct: 429 -NG--------------YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 321 EGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLG-KWVHEYLISIGHKGNIGSNQI 379
L M K G +PN T S+++ + G++ K V E+ + ++ +
Sbjct: 474 SANELLHEMWKIGL-QPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-----EAAGLNADTV 527
Query: 380 LATSLIDMYSKCGRLDRAKEVFEHAVSK----DVVLFNAMIMGLAVNGEGEDALRLFYKM 435
T+L+D Y K G +D+A+E+ + + K +V FN ++ G ++G ED +L M
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 436 PEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM-SFSTSLTLEHYACYIDLLARVGCI 494
G+ PNA TF + L+ I++DM S + Y + + +
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Query: 495 EEAIEVVTSMP---FKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLA 551
+EA + M F + + L+ G L + A+EV + M
Sbjct: 648 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ-------------MRR 694
Query: 552 NALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLV 595
LA+D++ D + + + KG K+P + +D ++ +LV
Sbjct: 695 EGLAADKEIFDFFS---DTKYKG--KRPDTIVDPIDEIIENYLV 733
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 116/545 (21%), Positives = 208/545 (38%), Gaps = 95/545 (17%)
Query: 80 RVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSK 139
RV + +PN+F +NA+I L + LF+ + L PND T+S L+ + R
Sbjct: 357 RVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRG 416
Query: 140 DARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRS---EVTCW 196
A + G N L+ + + F ++ A E+ ++ V +
Sbjct: 417 KLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK-FGDISAAEGFMAEMINKKLEPTVVTY 475
Query: 197 TSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSEL 256
TSL+ GY G + L+L+H M + + P T ++LS F + L
Sbjct: 476 TSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSG-------------LFRAGL 522
Query: 257 IDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQD 316
I D+ L +W NV+ +R V +N MI Y ++
Sbjct: 523 IRDAVK------------LFNEMAEW-NVKPNR--------------VTYNVMIEGYCEE 555
Query: 317 GCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGS 376
G + + M ++G P+ + ++ G S K + L HKGN
Sbjct: 556 GDMSKAFEFLKEMTEKGIV-PDTYSYRPLIHGLCLTGQASEAKVFVDGL----HKGNCEL 610
Query: 377 NQILATSLIDMYSKCGRLDRA--------------------------------------- 397
N+I T L+ + + G+L+ A
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLL 670
Query: 398 KEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHS 457
KE+ + + D V++ +MI + G+ ++A ++ M G PN T+ ++ +
Sbjct: 671 KEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA 730
Query: 458 GFLERGRQIFRDMSFSTSLTLE-HYACYIDLLARVGC-IEEAIEVVTSM--PFKPNNFVW 513
GF+ + M +S+ + Y C++D+L + +++A+E+ ++ N +
Sbjct: 731 GFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATY 790
Query: 514 GALLGGCLLHSRVELAQEVSKRLV--EVDPTSSGGYVMLANALASDRQWNDVSALRLEMR 571
L+ G R+E A E+ R++ V P Y + N L L M
Sbjct: 791 NMLIRGFCRQGRIEEASELITRMIGDGVSPDCI-TYTTMINELCRRNDVKKAIELWNSMT 849
Query: 572 EKGIK 576
EKGI+
Sbjct: 850 EKGIR 854
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 105/508 (20%), Positives = 210/508 (41%), Gaps = 37/508 (7%)
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
P + +A++ L + H LFND+ + P+ + ++ +++ KD A+++
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 148 HAHIQKMGYLNDPSVSNGLVAVYARGFR--NVVFARKVFDEIPDRSEVTCWTSLITGYAQ 205
AH++ G + N L+ + + V +K + +V + +L+ G +
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 206 SGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGE 265
E L++ M+ P + S++ + KIE + + ++D G
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLR--KRGKIEEALNLVKRVVD----FGV 363
Query: 266 SCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKR-GVVPWNAMISAYVQDGCPVEGLS 324
S + V L+ K ++ FDR+ G R V ++ +I + + G LS
Sbjct: 364 SPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALS 423
Query: 325 LFRIMVKEG---TTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILA 381
MV G + P + S+++ + GD+S + +I+ + +
Sbjct: 424 FLGEMVDTGLKLSVYPYN----SLINGHCKFGDISAAEGFMAEMIN----KKLEPTVVTY 475
Query: 382 TSLIDMYSKCGRLDRAKEVFEHAVSKDVV----LFNAMIMGLAVNGEGEDALRLFYKMPE 437
TSL+ Y G++++A ++ K + F ++ GL G DA++LF +M E
Sbjct: 476 TSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE 535
Query: 438 FGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEH-YACYIDLLARVGCIEE 496
+ ++PN T+ + G + + + ++M+ + + Y I L G E
Sbjct: 536 WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASE 595
Query: 497 AIEVVTSM---PFKPNNFVWGALLGGCLLHSRVELA----QEVSKRLVEVDPTSSGGYVM 549
A V + + N + LL G ++E A QE+ +R V++D G V+
Sbjct: 596 AKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG--VL 653
Query: 550 LANALA-SDRQWNDVSALRLEMREKGIK 576
+ +L DR+ L EM ++G+K
Sbjct: 654 IDGSLKHKDRKL--FFGLLKEMHDRGLK 679
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/331 (19%), Positives = 143/331 (43%), Gaps = 21/331 (6%)
Query: 199 LITGYAQSGHGEEVLQLFHMMVRQ-NLRPQNDTMVSVLSACSSLEISKIERWVYFLSELI 257
LI Y +S + + +F MM+ + +L P+ T+ ++L R EL
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKF------RHFGLAMELF 215
Query: 258 DDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG-KRGVVPWNAMISAYVQD 316
+D S G + T ++ + ++ +++E + A G +VP+N +I +
Sbjct: 216 NDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKK 275
Query: 317 GCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGS 376
E + + + + + +P+ VT +++ ++ + +G + + ++ +
Sbjct: 276 QKVWEAVGIKKDLAGK-DLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCL----RFSP 330
Query: 377 NQILATSLIDMYSKCGRLDRA----KEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLF 432
++ +SL++ K G+++ A K V + VS ++ ++NA+I L + +A LF
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390
Query: 433 YKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM-SFSTSLTLEHYACYIDLLARV 491
+M + GL+PN T+ + G L+ +M L++ Y I+ +
Sbjct: 391 DRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKF 450
Query: 492 GCIEEAIEVVTSM---PFKPNNFVWGALLGG 519
G I A + M +P + +L+GG
Sbjct: 451 GDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 113/257 (43%), Gaps = 24/257 (9%)
Query: 349 CAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKD 408
C ++ L + VH+ + + + ++I+MYS C D A VF ++
Sbjct: 122 CGEVEALEEARVVHDCITPLDARS--------YHTVIEMYSGCRSTDDALNVFNEMPKRN 173
Query: 409 VVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFR 468
+ MI LA NGEGE A+ +F + E G +P+ F AC G + G F
Sbjct: 174 SETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFE 233
Query: 469 DM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRV 526
M + L++E Y I++LA G ++EA++ V M +P+ +W L+ C + +
Sbjct: 234 SMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYL 293
Query: 527 ELAQEVSKRLVEVDPT--SSGGYVMLANALASDRQWNDVSALR-LEMREKGIKKQPGSSW 583
EL ++ + ++D + S L A ASD + LR +M KK+
Sbjct: 294 ELGDRFAELIKKLDASRMSKESNAGLVAAKASDSAMEKLKELRYCQMIRDDPKKR----- 348
Query: 584 ISVDGVVHEFLVGYLSH 600
+HEF G SH
Sbjct: 349 ------MHEFRAGDTSH 359
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 104/459 (22%), Positives = 188/459 (40%), Gaps = 70/459 (15%)
Query: 33 TFTNLLQG---HIPRSHLLQIHARIFQLGAHQD----NLLATRLIGHYPPRIALRVFHYL 85
TFT L+ G H S + + R+ G D + L P +AL + + +
Sbjct: 172 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 231
Query: 86 HN----PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLK-VCFRSKD 140
++ ++ +I L + HV +LF ++ ++ + P+ FT+S L+ +C +
Sbjct: 232 EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 291
Query: 141 ARCAEQVHAHIQKMGYLNDPSVS-NGLVAVYARGFRNVVFARKVFDEIPDRS---EVTCW 196
+ + + +++ +N V+ N L+ +A+ + ++ A K+FDE+ RS + +
Sbjct: 292 SDASRLLSDMLERK--INPNVVTFNSLIDAFAKEGK-LIEAEKLFDEMIQRSIDPNIVTY 348
Query: 197 TSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSEL 256
SLI G+ +E Q+F +MV ++ P
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKDCLP------------------------------ 378
Query: 257 IDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRG-VVPWNAMISAYVQ 315
D T N L+ F K V E F +S G G V + +I + Q
Sbjct: 379 -DVVTYN----------TLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 316 DGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIG 375
+F+ MV +G PN +T ++L + G L V EYL + +I
Sbjct: 428 ASDCDNAQMVFKQMVSDGV-HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIY 486
Query: 376 SNQILATSLIDMYSKCGRLDRAKEVF----EHAVSKDVVLFNAMIMGLAVNGEGEDALRL 431
+ I++ + K G+++ ++F V DV+ +N MI G G E+A L
Sbjct: 487 TYNIMSEGM----CKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Query: 432 FYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM 470
F KM E G P++GT+ + A G ++ ++M
Sbjct: 543 FIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 102/465 (21%), Positives = 190/465 (40%), Gaps = 50/465 (10%)
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
P+I F+ ++ +A+ V S ++ ++ N +T++ ++ R A +
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 148 HAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPD---RSEVTCWTSLITGYA 204
+ K+GY N L+ + G R + A + D++ + + + +T+L+ G
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNR-ISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 181
Query: 205 QSGHGEEVLQLFHMMVRQNLRPQNDTMVSV-------------LSACSSLEISKIERWVY 251
Q E + L MV + +P T +V L+ + +E KIE V
Sbjct: 182 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 241
Query: 252 FLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKR-GVVPWNAMI 310
S +ID K+ +V+ + F + G R V ++++I
Sbjct: 242 IYSTVIDS-------------------LCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 311 SAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGH 370
S G + L M+ E PN VT S++ A A+ G L + + + +I
Sbjct: 283 SCLCNYGRWSDASRLLSDML-ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI---- 337
Query: 371 KGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSK----DVVLFNAMIMGLAVNGEGE 426
+ +I N + SLI+ + RLD A+++F VSK DVV +N +I G +
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVV 397
Query: 427 DALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM-SFSTSLTLEHYACYI 485
D + LF M GL N T+ + + + + +F+ M S + Y +
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Query: 486 DLLARVGCIEEAI---EVVTSMPFKPNNFVWGALLGGCLLHSRVE 527
D L + G +E+A+ E + +P+ + + + G +VE
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVE 502
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 141/317 (44%), Gaps = 21/317 (6%)
Query: 87 NPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLK-VCFRSKDARCAE 145
NPN+ FN++I A++G + LF+++ R + PN T++ L+ C + A+
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE-AQ 365
Query: 146 QVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEV---TCWTSLITG 202
Q+ + L D N L+ + + + VV ++F ++ R V +T+LI G
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKA-KKVVDGMELFRDMSRRGLVGNTVTYTTLIHG 424
Query: 203 YAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSA-CSSLEISKIERWVYFLSELIDDST 261
+ Q+ + +F MV + P T ++L C + K+E+ + L
Sbjct: 425 FFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN---GKLEKAMVVFEYL---QK 478
Query: 262 SNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG-KRGVVPWNAMISAYVQDGCPV 320
S E + N ++ K G VE + F +S G K V+ +N MIS + + G
Sbjct: 479 SKMEPDIYTYN-IMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKE 537
Query: 321 EGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQIL 380
E +LF I +KE P+ T +++ A + GD + + + + S G+ + ++
Sbjct: 538 EAYTLF-IKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 596
Query: 381 ATSLIDMYSKCGRLDRA 397
L D GRLD+
Sbjct: 597 TDMLHD-----GRLDKG 608
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 134/334 (40%), Gaps = 56/334 (16%)
Query: 303 VVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIG--DLSLGKW 360
V + ++ Q E ++L MV +G +P+ VT +V++ + G DL+L
Sbjct: 170 TVTFTTLVHGLFQHNKASEAVALVERMVVKGC-QPDLVTYGAVINGLCKRGEPDLALN-- 226
Query: 361 VHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSK----DVVLFNAMI 416
L++ KG I ++ ++ +++ID K +D A +F +K DV ++++I
Sbjct: 227 ----LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 417 MGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSL 476
L G DA RL M E + PN TF + A + G L ++F +M
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM------ 336
Query: 477 TLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRL 536
I+ +I+ PN + +L+ G +H R++ AQ++ +
Sbjct: 337 -----------------IQRSID--------PNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Query: 537 VEVDPTSS-GGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDG------- 588
V D Y L N ++ D L +M +G+ + + G
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431
Query: 589 ----VVHEFLVGYLSHPQIEGIYLTLTGLAKHMK 618
+V + +V HP I L GL K+ K
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 112/541 (20%), Positives = 225/541 (41%), Gaps = 90/541 (16%)
Query: 27 VDHTPTTFTNLLQGHIPRSHLL---QIHARIFQLGAHQDNLLATRLI------GHYPPRI 77
++H T T ++ + + LL + R ++LG D + + L+ G +
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160
Query: 78 AL--RVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLL-KV 134
AL R+ P++ + +I L +G VS L + + P++ T+ +L ++
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220
Query: 135 C-----------FRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKV 183
C FR + R + A + + + D +G F + A +
Sbjct: 221 CKSGNSALALDLFRKMEER---NIKASVVQYSIVIDSLCKDG-------SFDD---ALSL 267
Query: 184 FDEIP---DRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSS 240
F+E+ +++V ++SLI G G ++ ++ M+ +N+ P V++ +
Sbjct: 268 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD------VVTFSAL 321
Query: 241 LEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG- 299
+++ E + EL ++ + G + L+ F K + ++ + FD + + G
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381
Query: 300 KRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGK 359
+ +V ++ +I++Y + +G+ LFR + +G PN +T +++ Q G L+ K
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI-PNTITYNTLVLGFCQSGKLNAAK 440
Query: 360 WVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSKDVVL----FNAM 415
+ + ++S G ++ + IL L D G L++A E+FE + L +N +
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDN----GELNKALEIFEKMQKSRMTLGIGIYNII 496
Query: 416 IMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTS 475
I G+ + +DA LF + + G++P+ T+ + G L +FR M
Sbjct: 497 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK---- 552
Query: 476 LTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGAL----LGGCLLHSRVELAQE 531
GC P++F + L LGG L S VEL +E
Sbjct: 553 --------------EDGC-------------TPDDFTYNILIRAHLGGSGLISSVELIEE 585
Query: 532 V 532
+
Sbjct: 586 M 586
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 165/382 (43%), Gaps = 24/382 (6%)
Query: 100 LAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLND 159
L E+G S+FN L P+ T++ L+ R K + + ++K G D
Sbjct: 329 LIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPD 388
Query: 160 PSVSNGLVAVYARGFRNVVFARKVFDEIPD---RSEVTCWTSLITGYAQSGHGEEVLQLF 216
+ N ++ + N+ A K+F+++ + + + + +LI GY + G EE +L
Sbjct: 389 TILFNAIINASSES-GNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLL 447
Query: 217 HMMVRQNLRPQNDTMVSVL--SACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTV 274
MM+R + ND ++L + C+ +I + VY + S G
Sbjct: 448 DMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQ-------SYGVKPDVVTFNT 500
Query: 275 LVYLFGKWGNVEKSRERF--DRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKE 332
L + + G+ + + + K V +++ Y ++G E L F M KE
Sbjct: 501 LAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM-KE 559
Query: 333 GTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCG 392
PN S++ I D+ V + + G K ++ + ++L++ +S G
Sbjct: 560 LGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDV----VTFSTLMNAWSSVG 615
Query: 393 RLDRAKEVF----EHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFL 448
+ R +E++ E + D+ F+ + G A GE E A ++ +M +FG++PN +
Sbjct: 616 DMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYT 675
Query: 449 GALSACSHSGFLERGRQIFRDM 470
+S +G +++ Q+++ M
Sbjct: 676 QIISGWCSAGEMKKAMQVYKKM 697
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 6/176 (3%)
Query: 333 GTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCG 392
GTT + + +++ + G + LI GHK ++ + L T+L
Sbjct: 313 GTTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHS 372
Query: 393 RLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALS 452
L +V ++ + D +LFNA+I + +G + A+++F KM E G +P A TF +
Sbjct: 373 LLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIK 432
Query: 453 ACSHSGFLERGRQIFRDMSFSTSLTLEHYACYIDLLARVGC----IEEAIEVVTSM 504
G LE ++ M L C ++L + C IEEA +V M
Sbjct: 433 GYGKIGKLEESSRLLDMMLRDEMLQPNDRTC--NILVQAWCNQRKIEEAWNIVYKM 486
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 121/528 (22%), Positives = 215/528 (40%), Gaps = 81/528 (15%)
Query: 41 HIPRSHLLQIHARIFQLGAHQDNLLATRLI-GHYPPR---IALRVFHYLHN---PNIFPF 93
+I HLL+ R G + D +L T+LI G + R A+RV L P++F +
Sbjct: 105 YIESLHLLETMVR---KGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAY 161
Query: 94 NAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLL-KVCFRSKDARCAEQVHAHIQ 152
NA+I + + + + ++ + +P+ T++ ++ +C R K
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK------------- 208
Query: 153 KMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPD---RSEVTCWTSLITGYAQSGHG 209
+ A KV +++ + V +T LI G
Sbjct: 209 ------------------------LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGV 244
Query: 210 EEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHD 269
+E L+L M+ + L+P T +++ E V E++ + G C
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCK------EGMVDRAFEMVRNLELKG--CEP 296
Query: 270 SV---NTVLVYLF--GKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLS 324
V N +L L GKW EK + S VV ++ +I+ +DG E ++
Sbjct: 297 DVISYNILLRALLNQGKWEEGEKLMTKM--FSEKCDPNVVTYSILITTLCRDGKIEEAMN 354
Query: 325 LFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNI-GSNQILATS 383
L ++M ++G T P+ + +++A + G L + E +IS G +I N +LAT
Sbjct: 355 LLKLMKEKGLT-PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLAT- 412
Query: 384 LIDMYSKCGRLDRAKEVF----EHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFG 439
K G+ D+A E+F E S + +N M L +G+ AL + +M G
Sbjct: 413 ----LCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG 468
Query: 440 LQPNAGTFLGALSACSHSGFLERGRQIFRDM-SFSTSLTLEHYACYIDLLARVGCIEEAI 498
+ P+ T+ +S G ++ ++ DM S ++ Y + + IE+AI
Sbjct: 469 IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAI 528
Query: 499 EVVTSM---PFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTS 543
V+ SM +PN + L+ G A E++ LV +D S
Sbjct: 529 NVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAIS 576
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 169/373 (45%), Gaps = 33/373 (8%)
Query: 162 VSNGLVAVYARGFRNVVFARKVFDEI---PDRSEVTCWTSLITGYAQSGHGEEVLQLFHM 218
+++ +++ R + V A+++F+ + V +++LI+ Y +SG EE + +F+
Sbjct: 235 LASAMISTLGR-YGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNS 293
Query: 219 MVRQNLRPQNDTMVSVLSACSS--LEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLV 276
M LRP T +V+ AC +E ++ ++ D+ NG L+
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKF-------FDEMQRNGVQPDRITFNSLL 346
Query: 277 YLFGKWGNVEKSRERFDRISAAG-KRGVVPWNAMISAYVQDGCPVEGLSL-FRIMVKEGT 334
+ + G E +R FD ++ ++ V +N ++ A + G + L F I+ +
Sbjct: 347 AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGG----QMDLAFEILAQMPV 402
Query: 335 TR--PNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCG 392
R PN V+ +V+ A+ G + + +G I +++ +L+ +Y+K G
Sbjct: 403 KRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG----IALDRVSYNTLLSIYTKVG 458
Query: 393 R----LDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFL 448
R LD +E+ + KDVV +NA++ G G+ ++ ++F +M + PN T+
Sbjct: 459 RSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYS 518
Query: 449 GALSACSHSGFLERGRQIFRDM-SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMP-- 505
+ S G + +IFR+ S + Y+ ID L + G + A+ ++ M
Sbjct: 519 TLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE 578
Query: 506 -FKPNNFVWGALL 517
PN + +++
Sbjct: 579 GISPNVVTYNSII 591
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 115/501 (22%), Positives = 194/501 (38%), Gaps = 88/501 (17%)
Query: 77 IALRVFHYL----HNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLL 132
IA R+F + ++ F+A+I G S+FN +K L PN T++ ++
Sbjct: 251 IAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVI 310
Query: 133 KVCFRSK-DARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDR- 190
C + + + + +Q+ G D N L+AV +RG AR +FDE+ +R
Sbjct: 311 DACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA-ARNLFDEMTNRR 369
Query: 191 --SEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIER 248
+V + +L+ + G + ++ M P M +V+S
Sbjct: 370 IEQDVFSYNTLLDAICKGGQMDLAFEILAQM------PVKRIMPNVVS------------ 411
Query: 249 WVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG-KRGVVPWN 307
S +ID F K G +++ F + G V +N
Sbjct: 412 ----YSTVIDG-------------------FAKAGRFDEALNLFGEMRYLGIALDRVSYN 448
Query: 308 AMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLIS 367
++S Y + G E L + R M G + + VT ++L + G K V +
Sbjct: 449 TLLSIYTKVGRSEEALDILREMASVGIKK-DVVTYNALLGGYGKQGKYDEVKKVFTEM-- 505
Query: 368 IGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEH----AVSKDVVLFNAMIMGLAVNG 423
+ ++ N + ++LID YSK G A E+F + DVVL++A+I L NG
Sbjct: 506 --KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNG 563
Query: 424 EGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFR--DMSFSTS----LT 477
A+ L +M + G+ PN T+ + A S ++R + FS+S LT
Sbjct: 564 LVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALT 623
Query: 478 LEHYACYIDLLAR-------------------VGCIEEAIEVVTSMPFKPNNFVWGALLG 518
I L + + CI E + + KPN + A+L
Sbjct: 624 ETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILN 683
Query: 519 GCLLHSRVELAQEVSKRLVEV 539
C SR ++ S L E+
Sbjct: 684 AC---SRCNSFEDASMLLEEL 701
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 100/468 (21%), Positives = 193/468 (41%), Gaps = 57/468 (12%)
Query: 76 RIALRVFHYLHN----PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFL 131
++A VF+ + + P +F F +++ + SL D+ PN + L
Sbjct: 199 KVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTL 258
Query: 132 LKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLV-----------------AVYARGF 174
+ + A Q+ + MG + D N ++ + RGF
Sbjct: 259 IHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGF 318
Query: 175 R-----------------NVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFH 217
V A+ +F IP + E+ + +LI G+ G ++ +
Sbjct: 319 APDDITYGYLMNGLCKIGRVDAAKDLFYRIP-KPEIVIFNTLIHGFVTHGRLDDAKAVLS 377
Query: 218 MMVRQ-NLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLV 276
MV + P T S++ E V E++ D + G + T+LV
Sbjct: 378 DMVTSYGIVPDVCTYNSLIYGYWK------EGLVGLALEVLHDMRNKGCKPNVYSYTILV 431
Query: 277 YLFGKWGNVEKSRERFDRISAAG-KRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTT 335
F K G ++++ + +SA G K V +N +ISA+ ++ E + +FR M ++G
Sbjct: 432 DGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG-C 490
Query: 336 RPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLD 395
+P+ T S++S ++ ++ W+ +IS G + +N + +LI+ + + G +
Sbjct: 491 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG----VVANTVTYNTLINAFLRRGEIK 546
Query: 396 RAKEVFEHAVSK----DVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGAL 451
A+++ V + D + +N++I GL GE + A LF KM G P+ + +
Sbjct: 547 EARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILI 606
Query: 452 SACSHSGFLERGRQIFRDMSFSTSL-TLEHYACYIDLLARVGCIEEAI 498
+ SG +E + ++M S + + I+ L R G IE+ +
Sbjct: 607 NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 96/462 (20%), Positives = 179/462 (38%), Gaps = 54/462 (11%)
Query: 84 YLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARC 143
Y P +N ++ +L ++F D+ R + P FTF ++K +
Sbjct: 176 YSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDS 235
Query: 144 AEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGY 203
A + + K G V N ++ + +LI
Sbjct: 236 ALSLLRDMTKHG-----CVPNSVI----------------------------YQTLIHSL 262
Query: 204 AQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSN 263
++ E LQL M P +T V+ L + K +R + +++++
Sbjct: 263 SKCNRVNEALQLLEEMFLMGCVPDAETFNDVI-----LGLCKFDR-INEAAKMVNRMLIR 316
Query: 264 GESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGL 323
G + D L+ K G V+ +++ F RI K +V +N +I +V G +
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP---KPEIVIFNTLIHGFVTHGRLDDAK 373
Query: 324 SLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATS 383
++ MV P+ T S++ + G + L V + + G K N+ S IL
Sbjct: 374 AVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTIL--- 430
Query: 384 LIDMYSKCGRLDRAKEVFEH----AVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFG 439
+D + K G++D A V + + V FN +I +A+ +F +MP G
Sbjct: 431 -VDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 440 LQPNAGTFLGALSACSHSGFLERGRQIFRDM-SFSTSLTLEHYACYIDLLARVGCIEEAI 498
+P+ TF +S ++ + RDM S Y I+ R G I+EA
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 549
Query: 499 EVVTSMPFKP---NNFVWGALLGGCLLHSRVELAQEVSKRLV 537
++V M F+ + + +L+ G V+ A+ + ++++
Sbjct: 550 KLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/382 (19%), Positives = 163/382 (42%), Gaps = 49/382 (12%)
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
P++ +N++I ++G V + +D++++ PN ++++ L+ D C
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILV-------DGFC---- 435
Query: 148 HAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSG 207
K+G +++ N L + A G + P+ C LI+ + +
Sbjct: 436 -----KLGKIDE--AYNVLNEMSADGLK------------PNTVGFNC---LISAFCKEH 473
Query: 208 HGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESC 267
E +++F M R+ +P T S++S E+ +I+ ++ L ++I S G
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLC--EVDEIKHALWLLRDMI----SEGVVA 527
Query: 268 HDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKR-GVVPWNAMISAYVQDGCPVEGLSLF 326
+ L+ F + G ++++R+ + + G + +N++I + G + SLF
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 327 RIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLID 386
M+++G P++++ +++ + G + + ++ G +I + SLI+
Sbjct: 588 EKMLRDGHA-PSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDI----VTFNSLIN 642
Query: 387 MYSKCGRLDRAKEVFE----HAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQP 442
+ GR++ +F + D V FN ++ L G DA L + E G P
Sbjct: 643 GLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVP 702
Query: 443 NAGTFLGALSACSHSGFLERGR 464
N T+ L + L+R R
Sbjct: 703 NHRTWSILLQSIIPQETLDRRR 724
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 123/280 (43%), Gaps = 18/280 (6%)
Query: 77 IALRVFHYLHN----PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLL 132
+AL V H + N PN++ + ++ + G + +++ N++ L PN F+ L+
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI 466
Query: 133 KVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVA--VYARGFRNVVF-ARKVFDEIPD 189
+ A ++ + + G D N L++ ++ ++ R + E
Sbjct: 467 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 526
Query: 190 RSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSA-CSSLEISKIER 248
+ VT + +LI + + G +E +L + MV Q T S++ C + E+ K
Sbjct: 527 ANTVT-YNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARS 585
Query: 249 WVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKR-GVVPWN 307
F L D + SC+ +L+ + G VE++ E + G +V +N
Sbjct: 586 L--FEKMLRDGHAPSNISCN-----ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFN 638
Query: 308 AMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLS 347
++I+ + G +GL++FR + EG P+ VT +++S
Sbjct: 639 SLINGLCRAGRIEDGLTMFRKLQAEGIP-PDTVTFNTLMS 677
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 111/492 (22%), Positives = 202/492 (41%), Gaps = 57/492 (11%)
Query: 70 IGHYPPRIALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFS 129
IG + + R F P+I F+ ++ +A+ V SL +++ ++ N +T+S
Sbjct: 60 IGLFGDMVKSRPF-----PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 130 FLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPD 189
+ R A + + K+GY N L+ + G R + A + D++ +
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR-ISEAVALVDQMVE 173
Query: 190 ---RSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSV------------ 234
+ + +T+L+ G Q E + L MV + +P T +V
Sbjct: 174 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 233
Query: 235 -LSACSSLEISKIERWVYFLSELIDD--STSNGESCHDSVNT---------VLVY----- 277
L+ + +E KIE V + +ID + + D N V Y
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
Query: 278 ---LFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGT 334
+G+W + SR D + +V +NA+I A+V++G VE L+ MVK
Sbjct: 294 CLCNYGRWSDA--SRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351
Query: 335 TRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRL 394
P+ V +++ + + G E + +G +G N + T+LI + +
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEG---MEVFREMSQRGLVG-NTVTYTTLIHGFFQARDC 407
Query: 395 DRAKEVFEHAVSK----DVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGA 450
D A+ VF+ VS D++ +N ++ GL NG E AL +F M + ++ + T+
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 451 LSACSHSGFLERGRQIFRDMSFS-TSLTLEHYACYIDLLARVGCIEEA----IEVVTSMP 505
+ A +G +E G +F +S + Y + R G EEA +E+ P
Sbjct: 468 IEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGP 527
Query: 506 FKPNNFVWGALL 517
PN+ + L+
Sbjct: 528 L-PNSGTYNTLI 538
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 128/301 (42%), Gaps = 19/301 (6%)
Query: 303 VVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVH 362
+V N++++ + E ++L MV+ G +P+ VT +++ Q S +
Sbjct: 145 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGY-QPDTVTFTTLVHGLFQHNKASEAVALV 203
Query: 363 EYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEH----AVSKDVVLFNAMIMG 418
E ++ G + ++ + ++I+ K G D A + + DVV++N +I G
Sbjct: 204 ERMVVKGCQPDL----VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDG 259
Query: 419 LAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM-SFSTSLT 477
L +DA LF KM G++P+ T+ +S + G ++ DM + +
Sbjct: 260 LCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPD 319
Query: 478 LEHYACYIDLLARVGCIEEA----IEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVS 533
L + ID + G + EA E+V S P+ + L+ G + RVE EV
Sbjct: 320 LVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVF 379
Query: 534 KRLVE---VDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVV 590
+ + + V T + Y L + R ++ + +M G+ + I +DG+
Sbjct: 380 REMSQRGLVGNTVT--YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLC 437
Query: 591 H 591
+
Sbjct: 438 N 438
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 149/340 (43%), Gaps = 29/340 (8%)
Query: 273 TVLVYLFGKWGNVEKSRERFDRISAAG-KRGVVPWNAMISAYVQDGCPVEGLSLFRIMVK 331
T L+ + W +E + FD+I G K VV + +I ++ + LF M
Sbjct: 157 TSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGT 216
Query: 332 EGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKC 391
G+ RPN VT ++++ +IG W+ ++ K I N I T+LID + K
Sbjct: 217 NGS-RPNVVTYNALVTGLCEIGRWGDAAWLLRDMM----KRRIEPNVITFTALIDAFVKV 271
Query: 392 GRLDRAKEVF----EHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTF 447
G+L AKE++ + +V DV + ++I GL + G ++A ++FY M G PN +
Sbjct: 272 GKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIY 331
Query: 448 LGALSACSHSGFLERGRQIFRDMS--------FSTSLTLEHYACYIDLLARVGCIEEAIE 499
+ S +E G +IF +MS + ++ ++ Y L+ R +E
Sbjct: 332 TTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYC----LVGRPDVAQEVFN 387
Query: 500 VVTSMPFKPNNFVWGALLGGCLLHSRVELA----QEVSKRLVEVDPTSSGGYVMLANALA 555
++S P+ + LL G + +VE A + + KR ++++ + Y ++ +
Sbjct: 388 QMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVT---YTIIIQGMC 444
Query: 556 SDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLV 595
+ D L + KG+K + + G L+
Sbjct: 445 KLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLI 484
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 188/448 (41%), Gaps = 28/448 (6%)
Query: 80 RVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLK-VCFRS 138
R+ H P+I F ++ V+A+ V SLF ++ + P T + ++ VC S
Sbjct: 73 RMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSS 132
Query: 139 KDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPD---RSEVTC 195
+ R A + K+G+ D L+ Y R + A +FD+I + V
Sbjct: 133 QPCR-ASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNR-IEDAIALFDQILGMGFKPNVVT 190
Query: 196 WTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSE 255
+T+LI ++ H ++LF+ M RP T ++++ + +I RW +
Sbjct: 191 YTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTG-----LCEIGRWGD-AAW 244
Query: 256 LIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFD-RISAAGKRGVVPWNAMISAYV 314
L+ D + T L+ F K G + +++E ++ I + V + ++I+
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLC 304
Query: 315 QDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNI 374
G E +F +M + G PN V +++ + + G + + KG +
Sbjct: 305 MYGLLDEARQMFYLMERNGCY-PNEVIYTTLIHGFCKSKRVEDGMKI---FYEMSQKG-V 359
Query: 375 GSNQILATSLIDMYSKCGRLDRAKEVFEHAVSK----DVVLFNAMIMGLAVNGEGEDALR 430
+N I T LI Y GR D A+EVF S+ D+ +N ++ GL NG+ E AL
Sbjct: 360 VANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALM 419
Query: 431 LFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSL--TLEHYACYIDLL 488
+F M + + N T+ + G +E +F + FS + + Y I
Sbjct: 420 IFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSL-FSKGMKPNVITYTTMISGF 478
Query: 489 ARVGCIEEAIEVVTSMP---FKPNNFVW 513
R G I EA + M F PN V+
Sbjct: 479 CRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 160/411 (38%), Gaps = 61/411 (14%)
Query: 52 ARIFQLGAHQDNLLATRLIGHY------PPRIAL--RVFHYLHNPNIFPFNAIIRVLAEQ 103
++ +LG D + T L+ Y IAL ++ PN+ + +IR L +
Sbjct: 142 GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKN 201
Query: 104 GHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVS 163
H++H LFN + PN T++ L+ + ++G D
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALV----------------TGLCEIGRWGDA--- 242
Query: 164 NGLVAVYARGFRNVVFARKVFDEIPDRSE--VTCWTSLITGYAQSGHGEEVLQLFHMMVR 221
A + D + R E V +T+LI + + G E +L+++M++
Sbjct: 243 ----------------AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
Query: 222 QNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGK 281
++ P T S+++ + R +++L E NG ++ + T L++ F K
Sbjct: 287 MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME------RNGCYPNEVIYTTLIHGFCK 340
Query: 282 WGNVEKSRERFDRISAAG-KRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHV 340
VE + F +S G + + +I Y G P +F M P+
Sbjct: 341 SKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAP-PDIR 399
Query: 341 TMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEV 400
T +L G + + EY+ K + N + T +I K G+++ A ++
Sbjct: 400 TYNVLLDGLCCNGKVEKALMIFEYM----RKREMDINIVTYTIIIQGMCKLGKVEDAFDL 455
Query: 401 FEHAVSK----DVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTF 447
F SK +V+ + MI G G +A LF KM E G PN +
Sbjct: 456 FCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 108/519 (20%), Positives = 216/519 (41%), Gaps = 37/519 (7%)
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
P++ F+ +A + V L+ +A N +T + ++ CF RC +
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN-CF----CRCCKTC 140
Query: 148 HAH-----IQKMGYLNDPSVSNGLV-AVYARGFRNVVFARKVFDEIPD---RSEVTCWTS 198
A+ + K+GY D + N L+ ++ G V A + D + + + +V + S
Sbjct: 141 FAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG--KVSEAVVLVDRMVENGCQPDVVTYNS 198
Query: 199 LITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVL-SACSSLEISKIERWVYFLSELI 257
++ G +SG L L M +N++ T +++ S C I+ + E+
Sbjct: 199 IVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD---GCIDAAISLFKEME 255
Query: 258 DDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDG 317
+ ++S+ L GKW + + D +S V+ +N ++ +V++G
Sbjct: 256 TKGIKSSVVTYNSLVRGLCKA-GKWN--DGALLLKDMVSREIVPNVITFNVLLDVFVKEG 312
Query: 318 CPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSN 377
E L++ M+ G + PN +T +++ LS + + ++ + +
Sbjct: 313 KLQEANELYKEMITRGIS-PNIITYNTLMDGYCMQNRLSEANNMLDLMV----RNKCSPD 367
Query: 378 QILATSLIDMYSKCGRLDRAKEVFEHAVSK----DVVLFNAMIMGLAVNGEGEDALRLFY 433
+ TSLI Y R+D +VF + + + V ++ ++ G +G+ + A LF
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 434 KMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFST-SLTLEHYACYIDLLARVG 492
+M G+ P+ T+ L +G LE+ +IF D+ S L + Y I+ + + G
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487
Query: 493 CIEEAIEVVTSMP---FKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEV-DPTSSGGYV 548
+E+A + S+P KPN + ++ G + A + +++ E + + Y
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYN 547
Query: 549 MLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVD 587
L A D + L EM+ G S + +D
Sbjct: 548 TLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 168/399 (42%), Gaps = 20/399 (5%)
Query: 80 RVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSK 139
+V + P+ FN +I+ L +G VS L + + P+ T++ ++ RS
Sbjct: 148 KVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSG 207
Query: 140 DARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDR---SEVTCW 196
D A + +++ D + ++ R + A +F E+ + S V +
Sbjct: 208 DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD-GCIDAAISLFKEMETKGIKSSVVTY 266
Query: 197 TSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSEL 256
SL+ G ++G + L MV + + P N +VL L++ E + +EL
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREIVP-NVITFNVL-----LDVFVKEGKLQEANEL 320
Query: 257 IDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFD-RISAAGKRGVVPWNAMISAYVQ 315
+ + G S + L+ + + ++ D + +V + ++I Y
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380
Query: 316 DGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIG 375
+G+ +FR + K G N VT ++ Q G + L + + + ++S G ++
Sbjct: 381 VKRVDDGMKVFRNISKRGLV-ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 376 SNQILATSLIDMYSKCGRLDRAKEVFEH----AVSKDVVLFNAMIMGLAVNGEGEDALRL 431
+ IL L D G+L++A E+FE + +V++ +I G+ G+ EDA L
Sbjct: 440 TYGILLDGLCDN----GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495
Query: 432 FYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM 470
F +P G++PN T+ +S G L + R M
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 128/308 (41%), Gaps = 24/308 (7%)
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
PN+ FN ++ V ++G + L+ ++ R ++PN T++ L+ D C +
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM-------DGYCMQNR 348
Query: 148 HAHIQKMGYL---NDPSVSNGLVAVYARGF---RNVVFARKVFDEIPDR---SEVTCWTS 198
+ M L N S +G+ + V KVF I R + ++
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 199 LITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELID 258
L+ G+ QSG + +LF MV + P D M + + K+E+ + E+ +
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLP--DVMTYGILLDGLCDNGKLEKAL----EIFE 462
Query: 259 DSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG-KRGVVPWNAMISAYVQDG 317
D + + T ++ K G VE + F + G K V+ + MIS + G
Sbjct: 463 DLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 522
Query: 318 CPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSN 377
E L R M ++G PN T +++ A + GDL+ + E + S G + S
Sbjct: 523 SLSEANILLRKMEEDGNA-PNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSI 581
Query: 378 QILATSLI 385
+++ L+
Sbjct: 582 KMVIDMLL 589
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 104/264 (39%), Gaps = 14/264 (5%)
Query: 321 EGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQIL 380
+ ++LF+ M++ P+ V SA A+ +L + L G NI + I+
Sbjct: 71 DAIALFQEMIRSRPL-PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 381 ATSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGL 440
C +V + D FN +I GL + G+ +A+ L +M E G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 441 QPNAGTFLGALSACSHSGFLERGRQIFRDM-SFSTSLTLEHYACYIDLLARVGCIEEAIE 499
QP+ T+ ++ SG + R M + + Y+ ID L R GCI+ AI
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 500 VVTSMPFKP--------NNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPTSSGGYVMLA 551
+ M K N+ V G G + L VS+ +V T + +L
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT----FNVLL 305
Query: 552 NALASDRQWNDVSALRLEMREKGI 575
+ + + + + L EM +GI
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGI 329
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 121/277 (43%), Gaps = 34/277 (12%)
Query: 349 CAQIGDLSLGKWVHEYLISIGHKGNIGSNQILA-TSLIDMYSKCGRLDRAKEVFEHAVSK 407
C L K VHE++ S ++G + I A S+I+MYS CG ++ A VF +
Sbjct: 191 CGDAQALQEAKVVHEFITS-----SVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPER 245
Query: 408 DVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIF 467
++ + +I A NG+GEDA+ F + + G +P+ F AC G + G F
Sbjct: 246 NLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHF 305
Query: 468 RDM--SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMPFKPNNFVWGALLGGCLLHSR 525
M + +EHY + +LA G ++EA+ V SM +PN +W L+ +H
Sbjct: 306 ESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGD 363
Query: 526 VELAQEVSKRLVEVDPT-----SSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPG 580
+ L + ++D + S G V + ++ D+ +L+ KG P
Sbjct: 364 LILGDRCQDMVEQLDASRLNKESKAGLVPVKSS--------DLVKEKLQRMAKG----PN 411
Query: 581 SSWISVDGVVHEFLVGYLSHPQIEGIYLTLTGLAKHM 617
+ G +S P+ +Y+ L L +HM
Sbjct: 412 YG-------IRYMAAGDISRPENRELYMALKSLKEHM 441
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 119/548 (21%), Positives = 228/548 (41%), Gaps = 41/548 (7%)
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
P++ +N I+ L + G V +F ++K APN T++ L+ + R+ A ++
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFEL 399
Query: 148 HAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEI------PDRSEVTCWTSLIT 201
+QK G + N +V + + + A +F+E+ PD E+T + SLI
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKS-QKLDEACAMFEEMDYKVCTPD--EIT-FCSLID 455
Query: 202 GYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDST 261
G + G ++ +++ M+ + R + S++ + + E ++I+ +
Sbjct: 456 GLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIK--NFFNHGRKEDGHKIYKDMINQNC 513
Query: 262 SNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVP----WNAMISAYVQDG 317
S +NT + +F K G EK R F+ I A R VP ++ +I ++ G
Sbjct: 514 SPDLQL---LNTYMDCMF-KAGEPEKGRAMFEEIKA---RRFVPDARSYSILIHGLIKAG 566
Query: 318 CPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSN 377
E LF M ++G + + C + G ++ + E + + G + +
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFC-KCGKVNKAYQLLEEMKTKGFEPTV--- 622
Query: 378 QILATSLIDMYSKCGRLDRAKEVFEHAVSK----DVVLFNAMIMGLAVNGEGEDALRLFY 433
+ S+ID +K RLD A +FE A SK +VV+++++I G G ++A +
Sbjct: 623 -VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILE 681
Query: 434 KMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM-SFSTSLTLEHYACYIDLLARVG 492
++ + GL PN T+ L A + + F+ M + Y I+ L +V
Sbjct: 682 ELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741
Query: 493 CIEEAI---EVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRL-VEVDPTSSGGYV 548
+A + + KP+ + ++ G + A + R S Y
Sbjct: 742 KFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYN 801
Query: 549 MLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQIEGIYL 608
+ L++ + D +L E R +G+ + + +D +H+ L I G L
Sbjct: 802 AMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLD-TLHK--NDCLEQAAIVGAVL 858
Query: 609 TLTGLAKH 616
TG A+H
Sbjct: 859 RETGKARH 866
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 109/460 (23%), Positives = 186/460 (40%), Gaps = 36/460 (7%)
Query: 96 IIRVLAEQGHVSHVFSLFNDLKHRVLAPN-DFTFSFLLKVCFRSKDARCAEQVHAHIQKM 154
+I VL V+ F + R P+ +++ LL V R ++ +Q+ +
Sbjct: 68 VIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVA 127
Query: 155 GYLNDPSVSNG----LVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGE 210
G+ PSV+ L V A R ++ + R + +T+LI ++ H +
Sbjct: 128 GF--GPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSD 185
Query: 211 EVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDS 270
+L LF M P +++ +K R LS L+D+ S+
Sbjct: 186 MMLTLFQQMQELGYEPTVHLFTTLIRG-----FAKEGRVDSALS-LLDEMKSSSLDADIV 239
Query: 271 VNTVLVYLFGKWGNVEKSRERFDRISAAG-KRGVVPWNAMISAYVQDGCPVEGLSLFRIM 329
+ V + FGK G V+ + + F I A G K V + +MI + E + +F +
Sbjct: 240 LYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
Query: 330 VKEGTTRPNHV--TMVSVLSACAQIGDLSLGKWVHEY--LISIGHKGNIGSNQILATSLI 385
K + TM+ +G S GK+ Y L KG+I S I ++
Sbjct: 300 EKNRRVPCTYAYNTMI--------MGYGSAGKFDEAYSLLERQRAKGSIPS-VIAYNCIL 350
Query: 386 DMYSKCGRLDRAKEVFEHAVSKDVV----LFNAMIMGLAVNGEGEDALRLFYKMPEFGLQ 441
K G++D A +VFE + KD +N +I L G+ + A L M + GL
Sbjct: 351 TCLRKMGKVDEALKVFEE-MKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLF 409
Query: 442 PNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEHYAC-YIDLLARVGCIEEAIEV 500
PN T + S L+ +F +M + E C ID L +VG +++A +V
Sbjct: 410 PNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKV 469
Query: 501 VTSM---PFKPNNFVWGALLGGCLLHSRVELAQEVSKRLV 537
M + N+ V+ +L+ H R E ++ K ++
Sbjct: 470 YEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI 509
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 120/523 (22%), Positives = 210/523 (40%), Gaps = 89/523 (17%)
Query: 93 FNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQ 152
+N ++ LA G V + ++ ++ + PN +T++ ++ + + A Q + I
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 153 KMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIP----DRSEVTCWTSLITGYAQSGH 208
+ G D L+ Y + +++ A KVF+E+P R+EV +T LI G +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQR-KDLDSAFKVFNEMPLKGCRRNEVA-YTHLIHGLCVARR 303
Query: 209 GEEVLQLFHMMVRQNLRPQNDT-MVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESC 267
+E + LF M P T V + S C S ER L+ L+ + G
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGS------ERKSEALN-LVKEMEETGIKP 356
Query: 268 HDSVNTVLVYLFGKWGNVEKSRERFDRISAAG-KRGVVPWNAMISAYVQDGCPVEGLSLF 326
+ TVL+ EK+RE ++ G V+ +NA+I+ Y + G + + +
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416
Query: 327 RIM---------------------------------VKEGTTRPNHVTMVSVLSACAQIG 353
+M + E P+ VT S++ + G
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSG 476
Query: 354 D-------LSL--------GKWVHEYLI-----------------SIGHKGNIGSNQILA 381
+ LSL +W + +I S+ KG + N ++
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG-VNPNVVMY 535
Query: 382 TSLIDMYSKCGRLDRAKEVFEHAVSKDV----VLFNAMIMGLAVNGEGEDALRLFYKMPE 437
T+LID Y K G++D A + E +SK+ + FNA+I GL +G+ ++A L KM +
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK 595
Query: 438 FGLQPNAGTFLGALSACSHSGFLERGRQIFRDM-SFSTSLTLEHYACYIDLLARVGCIEE 496
GLQP T + G + F+ M S T Y +I R G + +
Sbjct: 596 IGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLD 655
Query: 497 AIEVVTSMP---FKPNNFVWGALLGGCLLHSRVELAQEVSKRL 536
A +++ M P+ F + +L+ G + A +V KR+
Sbjct: 656 AEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 111/465 (23%), Positives = 188/465 (40%), Gaps = 81/465 (17%)
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
PN+ +NA+I ++G + + ++ R L+PN T++ L+K C V
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIK-------GYCKSNV 443
Query: 148 HAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSG 207
H A G N + RKV +PD V + SLI G +SG
Sbjct: 444 HK---------------------AMGVLNKMLERKV---LPD---VVTYNSLIDGQCRSG 476
Query: 208 HGEEVLQLFHMMVRQNLRPQNDTMVSVL-SACSSLEISKIERWVYFLSELIDDSTSNGES 266
+ + +L +M + L P T S++ S C S + + +L D G +
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEA-------CDLFDSLEQKGVN 529
Query: 267 CHDSVNTVLVYLFGKWGNVEKSRERFDR-ISAAGKRGVVPWNAMISAYVQDGCPVEGLSL 325
+ + T L+ + K G V+++ ++ +S + +NA+I DG E L
Sbjct: 530 PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLL 589
Query: 326 FRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLI 385
MVK G +P T ++ + GD + ++S G K + + T+ I
Sbjct: 590 EEKMVKIG-LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHT----YTTFI 644
Query: 386 DMYSKCGRLDRAKEVF----EHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQ 441
Y + GRL A+++ E+ VS D+ ++++I G G+ A + +M + G +
Sbjct: 645 QTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCE 704
Query: 442 PNAGTFLGALSACSHSGFLERGRQIFRD---------MSFSTSLTL-----EH------- 480
P+ TF LS H ++ G+Q + M F T + L EH
Sbjct: 705 PSQHTF---LSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAK 761
Query: 481 -YACYIDLLARVGCIEEAIEVVTSMP----FKPNNFVWGALLGGC 520
Y I + VG + A +V M P+ V+ ALL C
Sbjct: 762 SYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCC 806
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 101/450 (22%), Positives = 191/450 (42%), Gaps = 57/450 (12%)
Query: 152 QKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRS---EVTCWTSLITGYAQSGH 208
Q G++ N ++ R RN+ FA VF E+ + V + LI G+ +G+
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGN 220
Query: 209 GEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCH 268
+ L LF M + P T +++ L KI+ L + + E
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLR--KIDDGFKLLRSM---ALKGLEPNL 275
Query: 269 DSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGV----VPWNAMISAYVQDGCPVEGLS 324
S N V+ L + + +E ++ +RG V +N +I Y ++G + L
Sbjct: 276 ISYNVVINGLCREG----RMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALV 331
Query: 325 LFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSL 384
+ M++ G T P+ +T S++ + + G+++ E+L + +G + N+ T+L
Sbjct: 332 MHAEMLRHGLT-PSVITYTSLIHSMCKAGNMN---RAMEFLDQMRVRG-LCPNERTYTTL 386
Query: 385 IDMYSKCGRLDRA----KEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGL 440
+D +S+ G ++ A +E+ ++ S VV +NA+I G V G+ EDA+ + M E GL
Sbjct: 387 VDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446
Query: 441 QPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEHYACYIDLLARVGCIEEAIEV 500
P+ ++ LS S ++ ++ R+M +E+ I
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREM-----------------------VEKGI-- 481
Query: 501 VTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVEVD-PTSSGGYVMLANALASDRQ 559
KP+ + +L+ G R + A ++ + ++ V P Y L NA +
Sbjct: 482 ------KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD 535
Query: 560 WNDVSALRLEMREKGIKKQPGSSWISVDGV 589
L EM EKG+ + + ++G+
Sbjct: 536 LEKALQLHNEMVEKGVLPDVVTYSVLINGL 565
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 176/406 (43%), Gaps = 60/406 (14%)
Query: 88 PNIFPFNAIIR-VLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLK-VCFRSKDARCAE 145
P + +NA++ + + ++S ++F ++ ++PN FT++ L++ CF + + A
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCF-AGNIDVAL 225
Query: 146 QVHAHIQKMGYLNDPSVSNGLVAVYAR------GFR-----------------NVV---F 179
+ ++ G L + N L+ Y + GF+ NVV
Sbjct: 226 TLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGL 285
Query: 180 ARK--------VFDEIPDR----SEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQ 227
R+ V E+ R EVT + +LI GY + G+ + L + M+R L P
Sbjct: 286 CREGRMKEVSFVLTEMNRRGYSLDEVT-YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPS 344
Query: 228 NDTMVSVL-SACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVE 286
T S++ S C + +++ E +D G ++ T LV F + G +
Sbjct: 345 VITYTSLIHSMCKAGNMNRA-------MEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397
Query: 287 KSRERFDRISAAG-KRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSV 345
++ ++ G VV +NA+I+ + G + +++ M ++G + P+ V+ +V
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS-PDVVSYSTV 456
Query: 346 LSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEH-- 403
LS + D+ V ++ G I + I +SLI + + R A +++E
Sbjct: 457 LSGFCRSYDVDEALRVKREMVEKG----IKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 404 --AVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTF 447
+ D + A+I + G+ E AL+L +M E G+ P+ T+
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTY 558
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/408 (20%), Positives = 159/408 (38%), Gaps = 59/408 (14%)
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
PN+ +N +I L +G + V + ++ R + ++ T++ L+K + + A +
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 148 HAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSG 207
HA + + G PS V +TSLI ++G
Sbjct: 333 HAEMLRHGL--TPS-------------------------------VITYTSLIHSMCKAG 359
Query: 208 HGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESC 267
+ ++ M + L P T +++ S + + L E+ D NG S
Sbjct: 360 NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS--QKGYMNEAYRVLREMND----NGFSP 413
Query: 268 HDSVNTVLVYLFGKWGNVEKSRERFDRISAAG-KRGVVPWNAMISAYVQDGCPVEGLSLF 326
L+ G +E + + + G VV ++ ++S + + E L +
Sbjct: 414 SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVK 473
Query: 327 RIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLID 386
R MV++G +P+ +T S++ + ++E ++ +G + ++ T+LI+
Sbjct: 474 REMVEKG-IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG----LPPDEFTYTALIN 528
Query: 387 MYSKCGRLDRA----KEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQP 442
Y G L++A E+ E V DVV ++ +I GL +A RL K+ P
Sbjct: 529 AYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVP 588
Query: 443 NAGTFLGALSACSH----------SGFLERGRQIFRDMSFSTSLTLEH 480
+ T+ + CS+ GF +G D F + L H
Sbjct: 589 SDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNH 636
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 138/302 (45%), Gaps = 31/302 (10%)
Query: 78 ALRVFHYLHN----PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLK 133
A RV +++ P++ +NA+I G + ++ D+K + L+P+ ++S +L
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 134 VCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGF---RNVVFARKVFDEI--- 187
RS D A +V + + G D + L+ +GF R A +++E+
Sbjct: 459 GFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI----QGFCEQRRTKEACDLYEEMLRV 514
Query: 188 ---PDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACS----S 240
PD E T +T+LI Y G E+ LQL + MV + + P T +++ + +
Sbjct: 515 GLPPD--EFT-YTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 571
Query: 241 LEISKIERWVYFLSELIDDSTSNG--ESCHDSVNTVLVYL---FGKWGNVEKSRERFDRI 295
E ++ +++ + D T + E+C + +V L F G + ++ + F+ +
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM 631
Query: 296 SAAG-KRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGD 354
K +N MI + + G + +L++ MVK G + VT+++++ A + G
Sbjct: 632 LGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLL-HTVTVIALVKALHKEGK 690
Query: 355 LS 356
++
Sbjct: 691 VN 692
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 159/356 (44%), Gaps = 58/356 (16%)
Query: 176 NVVFARKVFDEIPDRS---EVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMV 232
N+ A+KVFDEI RS V + +LI GY + G+ +E +L H M + RP T
Sbjct: 255 NISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYS 314
Query: 233 SVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERF 292
++++A E + L D+ G +D + T L++ + G ++ +E +
Sbjct: 315 ALINALCK------ENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESY 368
Query: 293 DRISAAG-KRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQ 351
++ + G + +V +N +++ + ++G V ++ M++ G RP+ +T
Sbjct: 369 QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGL-RPDKITY--------- 418
Query: 352 IGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRA----KEVFEHAVSK 407
T+LID + + G ++ A KE+ ++ +
Sbjct: 419 ------------------------------TTLIDGFCRGGDVETALEIRKEMDQNGIEL 448
Query: 408 DVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIF 467
D V F+A++ G+ G DA R +M G++P+ T+ + A G + G ++
Sbjct: 449 DRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLL 508
Query: 468 RDMSFSTSL-TLEHYACYIDLLARVGCIEEA---IEVVTSMPFKPNNFVWGALLGG 519
++M + ++ Y ++ L ++G ++ A ++ + ++ P++ + LL G
Sbjct: 509 KEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/387 (18%), Positives = 167/387 (43%), Gaps = 29/387 (7%)
Query: 89 NIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVH 148
N++ FN ++ ++G++S +F+++ R L P +F+ L+ + + ++
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 149 AHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEV---TCWTSLITGYAQ 205
++K D + L+ + + A +FDE+ R + +T+LI G+++
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKE-NKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSR 357
Query: 206 SGHGEEVLQLFHMMVRQNLRPQ---NDTMVSVLSACSSLEISKIERWVYFLSELIDDSTS 262
+G + + + + M+ + L+P +T+V+ L ++ ++D
Sbjct: 358 NGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAAR---------NIVDGMIR 408
Query: 263 NGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG-KRGVVPWNAMISAYVQDGCPVE 321
G T L+ F + G+VE + E + G + V ++A++ ++G ++
Sbjct: 409 RGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVID 468
Query: 322 GLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILA 381
R M++ G +P+ VT ++ A + GD G + + + S GH ++ + +L
Sbjct: 469 AERALREMLRAG-IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLL 527
Query: 382 TSLIDMYSKCGRLDRAKEVFEH----AVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPE 437
L K G++ A + + V D + +N ++ G + ++ + + + PE
Sbjct: 528 NGL----CKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG---HHRHANSSKRYIQKPE 580
Query: 438 FGLQPNAGTFLGALSACSHSGFLERGR 464
G+ + ++ ++ + R R
Sbjct: 581 IGIVADLASYKSIVNELDRASKDHRNR 607
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/324 (18%), Positives = 131/324 (40%), Gaps = 18/324 (5%)
Query: 55 FQLGAHQDNLLATRLIGHYPPRIALRVFHYLHN----PNIFPFNAIIRVLAEQGHVSHVF 110
F L + N+L + A +VF + P + FN +I + G++ F
Sbjct: 236 FPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGF 295
Query: 111 SLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVY 170
L + ++ P+ FT+S L+ + A + + K G + + + L+ +
Sbjct: 296 RLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGH 355
Query: 171 ARGFRNVVFARKVFDEIPDRS---EVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQ 227
+R + ++ + ++ + ++ + +L+ G+ ++G + M+R+ LRP
Sbjct: 356 SRN-GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 228 NDTMVSVLSA-CSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNV- 285
T +++ C ++ E+ + NG + LV K G V
Sbjct: 415 KITYTTLIDGFCRGGDVETA-------LEIRKEMDQNGIELDRVGFSALVCGMCKEGRVI 467
Query: 286 EKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSV 345
+ R + + A K V + M+ A+ + G G L + M +G P+ VT +
Sbjct: 468 DAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV-PSVVTYNVL 526
Query: 346 LSACAQIGDLSLGKWVHEYLISIG 369
L+ ++G + + + +++IG
Sbjct: 527 LNGLCKLGQMKNADMLLDAMLNIG 550
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 190/444 (42%), Gaps = 30/444 (6%)
Query: 45 SHLLQIHARIFQLGAHQDNLLATRLIG--------HYPPRIALRVFHYLHNPNIFPFNAI 96
S+ +I +LG D ++ L+ + R+ H P + N +
Sbjct: 140 SYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTL 199
Query: 97 IRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKV-CFRSKDARCAEQVHAHIQKMG 155
+ L G VS L + + PN+ T+ +L V C + A E + ++
Sbjct: 200 VNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259
Query: 156 YLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPD---RSEVTCWTSLITGYAQSGHGEEV 212
L+ S + + G + F +F+E+ ++++ + +LI G+ +G ++
Sbjct: 260 KLDAVKYSIIIDGLCKDGSLDNAF--NLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDG 317
Query: 213 LQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVN 272
+L M+++ + P N SVL S ++ K+ L E++ + ++S
Sbjct: 318 AKLLRDMIKRKISP-NVVTFSVLID-SFVKEGKLREADQLLKEMMQRGIAPNTITYNS-- 373
Query: 273 TVLVYLFGKWGNVEKSRERFD-RISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVK 331
L+ F K +E++ + D IS ++ +N +I+ Y + +GL LFR M
Sbjct: 374 --LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431
Query: 332 EGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKC 391
G N VT +++ Q G L + K + + ++S + +I S +IL L D
Sbjct: 432 RGVI-ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN---- 486
Query: 392 GRLDRAKEVF----EHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTF 447
G L++A E+F + + D+ ++ +I G+ + +DA LF +P G++ +A +
Sbjct: 487 GELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAY 546
Query: 448 LGALSACSHSGFLERGRQIFRDMS 471
+S L + +FR M+
Sbjct: 547 NIMISELCRKDSLSKADILFRKMT 570
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 100/506 (19%), Positives = 199/506 (39%), Gaps = 68/506 (13%)
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
P + FN + +A+ V +L ++ + +A + +T S ++ R + A
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 148 HAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFD---EIPDRSEVTCWTSLITGYA 204
I K+GY D + N L+ R V A ++ D E+ + + +L+ G
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECR-VSEALELVDRMVEMGHKPTLITLNTLVNGLC 204
Query: 205 QSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSA-CSSLEISKIERWVYFLSELIDDSTSN 263
+G + + L MV +P T VL+ C S + + EL+
Sbjct: 205 LNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA-------LAMELLRKMEER 257
Query: 264 GESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG-KRGVVPWNAMISAYVQDGCPVEG 322
++++ K G+++ + F+ + G K ++ +N +I + G +G
Sbjct: 258 NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDG 317
Query: 323 LSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILAT 382
L R M+K + PN VT +
Sbjct: 318 AKLLRDMIKRKIS-PNVVTF---------------------------------------S 337
Query: 383 SLIDMYSKCGRLDRA----KEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEF 438
LID + K G+L A KE+ + ++ + + +N++I G E+A+++ M
Sbjct: 338 VLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Query: 439 GLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSL-TLEHYACYIDLLARVGCIEEA 497
G P+ TF ++ + ++ G ++FR+MS + Y + + G +E A
Sbjct: 398 GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVA 457
Query: 498 IEVVTSM---PFKPNNFVWGALLGGCLLHSRVELAQE----VSKRLVEVDPTSSGGYVML 550
++ M +P+ + LL G + +E A E + K +E+D G Y+++
Sbjct: 458 KKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDI---GIYMII 514
Query: 551 ANALASDRQWNDVSALRLEMREKGIK 576
+ + + + +D L + KG+K
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVK 540
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 11/192 (5%)
Query: 409 VVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFR 468
++ N ++ GL +NG+ DA+ L +M E G QPN T+ L+ SG ++ R
Sbjct: 193 LITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLR 252
Query: 469 DM-SFSTSLTLEHYACYIDLLARVGCIEEAIEVVTSMP---FKPNNFVWGALLGGCLLHS 524
M + L Y+ ID L + G ++ A + M FK + + L+GG
Sbjct: 253 KMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAG 312
Query: 525 R----VELAQEVSKRLVEVDPTSSGGYVMLANALASDRQWNDVSALRLEMREKGIKKQPG 580
R +L +++ KR + + + + +L ++ + + + L EM ++GI
Sbjct: 313 RWDDGAKLLRDMIKRKISPNVVT---FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 581 SSWISVDGVVHE 592
+ +DG E
Sbjct: 370 TYNSLIDGFCKE 381
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 134/317 (42%), Gaps = 21/317 (6%)
Query: 87 NPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLK-VCFRSKDARCAE 145
+PN+ F+ +I ++G + L ++ R +APN T++ L+ C ++ +
Sbjct: 330 SPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQ 389
Query: 146 QVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDR---SEVTCWTSLITG 202
V I K G D N L+ Y + R + ++F E+ R + + +L+ G
Sbjct: 390 MVDLMISK-GCDPDIMTFNILINGYCKANR-IDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 203 YAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSA-CSSLEISKIERWVYFLSELIDDST 261
+ QSG E +LF MV + +RP + +L C + E+ K E+
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA-------LEIFGKIE 500
Query: 262 SNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG-KRGVVPWNAMISAYVQDGCPV 320
+ + ++++ V+ + + F + G K +N MIS +
Sbjct: 501 KSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLS 560
Query: 321 EGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQIL 380
+ LFR M +EG P+ +T ++ A D + + E + S G ++ + ++
Sbjct: 561 KADILFRKMTEEGHA-PDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKM- 618
Query: 381 ATSLIDMYSKCGRLDRA 397
+I+M S G LD++
Sbjct: 619 ---VINMLSS-GELDKS 631
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 118/575 (20%), Positives = 236/575 (41%), Gaps = 55/575 (9%)
Query: 30 TPTTFTNLLQGHIPRSHL---LQIHARIFQLGAHQDNLLATRLIGHYPPRI----ALRVF 82
+P T+ +++G L I + G + ++ T LI + A+RV
Sbjct: 416 SPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475
Query: 83 HYLHN----PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRS 138
+ P+IF +N++I L++ + S ++ L PN FT+ + +
Sbjct: 476 KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEA 535
Query: 139 KDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRS---EVTC 195
+ A++ +++ G L + + GL+ Y + + V+ A + + D+ +
Sbjct: 536 SEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK-VIEACSAYRSMVDQGILGDAKT 594
Query: 196 WTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSE 255
+T L+ G ++ ++ ++F M + + P + +++ S L +++ S
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL--GNMQK----ASS 648
Query: 256 LIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKR-GVVPWNAMISAYV 314
+ D+ G + + + +L+ F + G +EK++E D +S G V + +I Y
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYC 708
Query: 315 QDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISI--GHKG 372
+ G E LF M +G P+ +++ C ++ D+ E I+I +K
Sbjct: 709 KSGDLAEAFRLFDEMKLKGLV-PDSFVYTTLVDGCCRLNDV-------ERAITIFGTNKK 760
Query: 373 NIGSNQILATSLIDMYSKCGRLDRAKEV--------FEHAVSKDVVLFNAMIMGLAVNGE 424
S+ +LI+ K G+ + EV F+ + V +N MI L G
Sbjct: 761 GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGN 820
Query: 425 GEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEH--YA 482
E A LF++M L P T+ L+ G +F D + + + +H Y+
Sbjct: 821 LEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF-DEAIAAGIEPDHIMYS 879
Query: 483 CYIDLLARVGCIEEAIEVVTSMPFKPNNFVWG---------ALLGGCLLHSRVELAQEVS 533
I+ + G +A+ +V M F N G ALL G +E+A++V
Sbjct: 880 VIINAFLKEGMTTKALVLVDQM-FAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVM 938
Query: 534 KRLVEVD--PTSSGGYVMLANALASDRQWNDVSAL 566
+ +V + P S+ ++ + S Q + A+
Sbjct: 939 ENMVRLQYIPDSATVIELINESCISSNQRVEADAV 973
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 113/528 (21%), Positives = 218/528 (41%), Gaps = 63/528 (11%)
Query: 44 RSHLLQIHARIFQLGAHQDNLLATRLIGHYPPRIALRVFHYL--HNPNIFPF--NAIIRV 99
+S L+++ + L H +LL L+ A + H + H NI P+ + I V
Sbjct: 297 KSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICV 356
Query: 100 LAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLND 159
++++G + +LF+ + L P ++ L++ R K+ R ++ ++K +
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416
Query: 160 P----SVSNGLVAV-YARGFRNVVFARKVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQ 214
P +V G+ + G N+V K R V +T+LI + Q+ + ++
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIV---KEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMR 473
Query: 215 LFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTV 274
+ M Q + P S++ S + +++ FL E++++
Sbjct: 474 VLKEMKEQGIAPDIFCYNSLIIGLS--KAKRMDEARSFLVEMVENGLKPN---------- 521
Query: 275 LVYLFGKW--GNVEKSR-ERFDR-ISAAGKRGVVP----WNAMISAYVQDGCPVEGLSLF 326
+ +G + G +E S D+ + + GV+P +I+ Y + G +E S +
Sbjct: 522 -AFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY 580
Query: 327 RIMVKEGT--TRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSL 384
R MV +G + +++ L ++ D E + KG I + L
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDD------AEEIFREMRGKG-IAPDVFSYGVL 633
Query: 385 IDMYSKCGRLDRAKEVF----EHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGL 440
I+ +SK G + +A +F E ++ +V+++N ++ G +GE E A L +M GL
Sbjct: 634 INGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693
Query: 441 QPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLEH-YACYIDLLARVGCIEEAIE 499
PNA T+ + SG L ++F +M + Y +D R+ +E AI
Sbjct: 694 HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAIT 753
Query: 500 VV---------TSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRLVE 538
+ ++ PF AL+ + EL EV RL++
Sbjct: 754 IFGTNKKGCASSTAPF-------NALINWVFKFGKTELKTEVLNRLMD 794
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 109/528 (20%), Positives = 223/528 (42%), Gaps = 46/528 (8%)
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
P++ FN +I+ L + + D+ L P++ TF+ +++ D A ++
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 148 HAHIQKMGYLNDPSVSNGLVAVYARGF---RNVVFARKVFDEIPDRS----EVTCWTSLI 200
+ + G S SN V V GF V A E+ ++ + + +L+
Sbjct: 247 REQMVEFGC----SWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 201 TGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDS 260
G ++GH + +++ +M+++ P T SV+S L +++ V L ++I
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL--GEVKEAVEVLDQMITRD 360
Query: 261 TSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPV 320
S +++ L+ K VE++ E +++ +G++P ++ +Q C
Sbjct: 361 CSPNTVTYNT----LISTLCKENQVEEATELARVLTS---KGILPDVCTFNSLIQGLCLT 413
Query: 321 E----GLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGS 376
+ LF M +G P+ T ++ + G L + + + G ++
Sbjct: 414 RNHRVAMELFEEMRSKGC-EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV-- 470
Query: 377 NQILATSLIDMYSKCGRLDRAKEVFE----HAVSKDVVLFNAMIMGLAVNGEGEDALRLF 432
I +LID + K + A+E+F+ H VS++ V +N +I GL + EDA +L
Sbjct: 471 --ITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 528
Query: 433 YKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM-SFSTSLTLEHYACYIDLLARV 491
+M G +P+ T+ L+ G +++ I + M S + Y I L +
Sbjct: 529 DQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Query: 492 GCIEEAIEVVTSMPFKPNNFV---WGALLGGCLLHSRVELAQEVSKRLVEVD--PTSSGG 546
G +E A +++ S+ K N + ++ G + A + + ++E + P +
Sbjct: 589 GRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVS 648
Query: 547 YVM----LANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVV 590
Y + L N R+ D +E+ EKG + S ++ +G++
Sbjct: 649 YRIVFRGLCNGGGPIREAVD---FLVELLEKGFVPEFSSLYMLAEGLL 693
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/458 (21%), Positives = 190/458 (41%), Gaps = 64/458 (13%)
Query: 87 NPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQ 146
+PN+ + +I+ L + G + F ++ + R + P+ T+S L+ + + R
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447
Query: 147 VHAHIQKMGYLNDPSVSNGLVAVYARG---FRNVVFARKVFDEIPDRSEVTCWTSLITGY 203
++ + KMGY D + LV ++ + F+ K+ + R V + SLI G+
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ-SIRLNVVVFNSLIDGW 506
Query: 204 AQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSN 263
+ +E L++F +M ++P T +V+ +S +E
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVM------RVSIME---------------- 544
Query: 264 GESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG-KRGVVPWNAMISAYVQDGCPVEG 322
G +E++ F R+ G + + + +I A+ + P G
Sbjct: 545 -------------------GRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIG 585
Query: 323 LSLFRIMVKEGTTRPNHV--TMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQIL 380
L LF +M + + V ++ +L C +I D S K+ + + +G + + +
Sbjct: 586 LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDAS--KFFNNLI-----EGKMEPDIVT 638
Query: 381 ATSLIDMYSKCGRLDRAKEVFE----HAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMP 436
++I Y RLD A+ +FE + V +I L N + + A+R+F M
Sbjct: 639 YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA 698
Query: 437 EFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM-SFSTSLTLEHYACYIDLLARVGCIE 495
E G +PNA T+ + S S +E ++F +M S ++ Y+ ID L + G ++
Sbjct: 699 EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD 758
Query: 496 EAIEV---VTSMPFKPNNFVWGALLGG-CLLHSRVELA 529
EA + P+ + L+ G C + VE A
Sbjct: 759 EATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAA 796
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/429 (21%), Positives = 180/429 (41%), Gaps = 56/429 (13%)
Query: 193 VTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYF 252
V + +LI G+ + G + LF +M ++ + P L A S+L + +
Sbjct: 286 VVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPD-------LIAYSTLIDGYFKAGMLG 338
Query: 253 LS-ELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG-KRGVVPWNAMI 310
+ +L + G V + + ++ K G++ + + R+ G VV + +I
Sbjct: 339 MGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILI 398
Query: 311 SAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGH 370
QDG E ++ ++K G P+ VT S++ + G+L G ++E +I +G+
Sbjct: 399 KGLCQDGRIYEAFGMYGQILKRGM-EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 371 KGN-------------------------------IGSNQILATSLIDMYSKCGRLDRAKE 399
+ I N ++ SLID + + R D A +
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 400 VFE----HAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSA-C 454
VF + + DV F ++ + G E+AL LF++M + GL+P+A + + A C
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFC 577
Query: 455 SHSGFLERGRQIFRDMSFSTSLTLEHYAC--YIDLLARVGCIEEAIEVVTSM---PFKPN 509
H G Q+F D+ ++ + C I LL + IE+A + ++ +P+
Sbjct: 578 KHMK-PTIGLQLF-DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 635
Query: 510 NFVWGALLGGCLLHSRVELAQEVSKRLVEVDP--TSSGGYVMLANALASDRQWNDVSALR 567
+ ++ G R++ A+ + + L++V P ++ +L + L + + +
Sbjct: 636 IVTYNTMICGYCSLRRLDEAERIFE-LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF 694
Query: 568 LEMREKGIK 576
M EKG K
Sbjct: 695 SIMAEKGSK 703
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 150/345 (43%), Gaps = 41/345 (11%)
Query: 195 CWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLS 254
C+ LI+ YA+ G E+ ++ F M + RP T +L E+ + + + +
Sbjct: 129 CFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVY-N 187
Query: 255 ELIDDSTSNGESCHDSVNTVLVYLFG-------KWGNVEKSRERFDRISAAGKRGVVP-- 305
E++ C+ S N +Y FG K G +++ FD ++ RG+ P
Sbjct: 188 EML--------KCNCSPN---LYTFGILMDGLYKKGRTSDAQKMFDDMTG---RGISPNR 233
Query: 306 --WNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHE 363
+ +IS Q G + LF M G P+ V ++L G LG+ V
Sbjct: 234 VTYTILISGLCQRGSADDARKLFYEMQTSGNY-PDSVAHNALLD-----GFCKLGRMVEA 287
Query: 364 Y-LISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSK----DVVLFNAMIMG 418
+ L+ + K +SLID + R +A E++ + + K D++L+ +I G
Sbjct: 288 FELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQG 347
Query: 419 LAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTL 478
L+ G+ EDAL+L MP G+ P+ + + A G LE GR + +MS + S
Sbjct: 348 LSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPD 407
Query: 479 E-HYACYIDLLARVGCIEEAIEVVTSMP---FKPNNFVWGALLGG 519
+ I + R G + EA E+ T + P+ + AL+ G
Sbjct: 408 ACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDG 452
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 164/401 (40%), Gaps = 55/401 (13%)
Query: 87 NPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQ 146
+PN++ F ++ L ++G S +F+D+ R ++PN T++ L+ + A A +
Sbjct: 195 SPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARK 254
Query: 147 VHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFAR--KVFDEIPDRSEVTCWTSLITGYA 204
+ +Q G D N L+ + + R V ++F++ + ++SLI G
Sbjct: 255 LFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLF 314
Query: 205 QSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNG 264
++ + +L+ M+++N++P D ++ + + KIE + LS + S
Sbjct: 315 RARRYTQAFELYANMLKKNIKP--DIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPD 372
Query: 265 ESCHDSV-------------------------------NTVLVYLFGKWGNVEKSRERFD 293
C+++V +T+L+ + G V ++ E F
Sbjct: 373 TYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFT 432
Query: 294 RISAAG-KRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQI 352
I +G V +NA+I + G E L M RP S+ +
Sbjct: 433 EIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM---EVGRP-----ASLFLRLSHS 484
Query: 353 GDLSLGKWVHEYLI-----SIGHKGNIGSNQILAT--SLIDMYSKCGRLDRAKEVFE--- 402
G+ S V I + H + GS+ + + LI+ + + G +D A ++
Sbjct: 485 GNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQ 544
Query: 403 -HAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQP 442
+S D V +N +I GL G E+A +LFY +F P
Sbjct: 545 LKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSP 585
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 135/299 (45%), Gaps = 18/299 (6%)
Query: 180 ARKVFDEIPDRS---EVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLS 236
A K+ D+IP + +V +T+++ Y+++G E+ + LF M P T +L
Sbjct: 194 AAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILD 253
Query: 237 ACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRIS 296
+ S W L ++D+ S G + + ++ + G + +++E F +
Sbjct: 254 VFGKMGRS----WRKILG-VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELK 308
Query: 297 AAG-KRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDL 355
+ G + G V +NA++ + + G E LS+ + M +E + + VT +++A + G
Sbjct: 309 SCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEM-EENSCPADSVTYNELVAAYVRAGFS 367
Query: 356 SLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVF----EHAVSKDVVL 411
V E + G + N I T++ID Y K G+ D A ++F E +
Sbjct: 368 KEAAGVIEMMTKKG----VMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCT 423
Query: 412 FNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM 470
+NA++ L + +++ M G PN T+ L+ C + G + ++FR+M
Sbjct: 424 YNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREM 482
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 117/554 (21%), Positives = 210/554 (37%), Gaps = 91/554 (16%)
Query: 48 LQIHARIFQLGAHQDNLLATRLIGHYPPRIAL--RVFHYLHNPNIFPFNAIIRVLAEQGH 105
+ + + + A+ L A G Y I L R+ +P + +N I+ V + G
Sbjct: 201 IPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGR 260
Query: 106 V-SHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYL------- 157
+ + ++++ + L ++FT S +L C R R A++ A ++ GY
Sbjct: 261 SWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYN 320
Query: 158 ----------------------------NDPSVSNGLVAVYAR-GFRNVVFARKVFDEIP 188
D N LVA Y R GF A V + +
Sbjct: 321 ALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKE--AAGVIEMMT 378
Query: 189 DRS---EVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISK 245
+ +T++I Y ++G +E L+LF+ M P T +VLS + K
Sbjct: 379 KKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSL-----LGK 433
Query: 246 IERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG-KRGVV 304
R + +++ D SNG S + + ++ L G G + F + + G +
Sbjct: 434 KSRSNEMI-KMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRD 492
Query: 305 PWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEY 364
+N +ISAY + G V+ ++ M + G T ++L+A A+ GD G+ V
Sbjct: 493 TFNTLISAYGRCGSEVDASKMYGEMTRAGFN-ACVTTYNALLNALARKGDWRSGENVISD 551
Query: 365 LISIGHK-------------------------------GNIGSNQILATSLIDMYSKCGR 393
+ S G K G I + +L +L+ KC
Sbjct: 552 MKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRA 611
Query: 394 LDRAKEVF----EHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLG 449
L ++ F +H D+V+FN+M+ N + A + + E GL P+ T+
Sbjct: 612 LAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNS 671
Query: 450 ALSACSHSGFLERGRQIFRDMSFST-SLTLEHYACYIDLLARVGCIEEAIEVVTSMP--- 505
+ G + +I + + S L Y I R G ++EA+ +++ M
Sbjct: 672 LMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG 731
Query: 506 FKPNNFVWGALLGG 519
+P F + + G
Sbjct: 732 IRPCIFTYNTFVSG 745
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 145/358 (40%), Gaps = 35/358 (9%)
Query: 182 KVFDEIPDRSEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSL 241
+ FD + T SL+ G SGH E + LF +V +S S L
Sbjct: 125 RFFDSVKSELLRTDLVSLVKGLDDSGHWERAVFLFEWLV-----------LSSNSGALKL 173
Query: 242 EISKIERWVYFL---------SELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERF 292
+ IE +V L ++L+D T +++ + + G EK+ + F
Sbjct: 174 DHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLF 233
Query: 293 DRISAAGKR-GVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQ 351
+R+ G +V +N ++ + + G + ++ + + T +VLSACA+
Sbjct: 234 ERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAR 293
Query: 352 IGDLSLGKWVHEYLISIGHK-GNIGSNQILATSLIDMYSKCGRLDRA----KEVFEHAVS 406
G L K L S G++ G + N +L+ ++ K G A KE+ E++
Sbjct: 294 EGLLREAKEFFAELKSCGYEPGTVTYN-----ALLQVFGKAGVYTEALSVLKEMEENSCP 348
Query: 407 KDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQI 466
D V +N ++ G ++A + M + G+ PNA T+ + A +G + ++
Sbjct: 349 ADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKL 408
Query: 467 FRDMSFSTSL-TLEHYACYIDLLARVGCIEEAIEVVTSMPFK---PNNFVWGALLGGC 520
F M + + Y + LL + E I+++ M PN W +L C
Sbjct: 409 FYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALC 466
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/447 (19%), Positives = 181/447 (40%), Gaps = 65/447 (14%)
Query: 78 ALRVFHYLHN----PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLK 133
AL++F+ + PN +NA++ +L ++ + + + D+K +PN T++ +L
Sbjct: 405 ALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLA 464
Query: 134 VCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPD---R 190
+C + +V ++ G+ D N L++ Y R V A K++ E+
Sbjct: 465 LCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVD-ASKMYGEMTRAGFN 523
Query: 191 SEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWV 250
+ VT + +L+ A+ G + M + +P +T S++ C + +
Sbjct: 524 ACVTTYNALLNALARKGDWRSGENVISDMKSKGFKP-TETSYSLMLQCYA------KGGN 576
Query: 251 YFLSELIDDSTSNGESCHD--SVNTVLVYLFGKWGNVEKSRERFDRISAAG-KRGVVPWN 307
Y E I++ G+ + T+L+ F K + S F G K +V +N
Sbjct: 577 YLGIERIENRIKEGQIFPSWMLLRTLLLANF-KCRALAGSERAFTLFKKHGYKPDMVIFN 635
Query: 308 AMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLIS 367
+M+S + ++ + + + ++G + P+ VT
Sbjct: 636 SMLSIFTRNNMYDQAEGILESIREDGLS-PDLVTY------------------------- 669
Query: 368 IGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVF----EHAVSKDVVLFNAMIMGLAVNG 423
SL+DMY + G +A+E+ + + D+V +N +I G G
Sbjct: 670 --------------NSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRG 715
Query: 424 EGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLTLE-HYA 482
++A+R+ +M E G++P T+ +S + G + M+ + E +
Sbjct: 716 LMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFK 775
Query: 483 CYIDLLARVGCIEEAIEVVTSMP-FKP 508
+D R G EA++ V+ + F P
Sbjct: 776 MVVDGYCRAGKYSEAMDFVSKIKTFDP 802
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 107/514 (20%), Positives = 224/514 (43%), Gaps = 62/514 (12%)
Query: 2 LPLSLHFTQKFKHCYLLPFRSSCSIVDHTPTTFTNLLQ-----GHIPRSHLLQIHARIFQ 56
+PL+LHF + ++ ++ HTP TF +++ G + L ++
Sbjct: 56 VPLALHFFKSI---------ANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQG 106
Query: 57 LGAHQDNLLAT----RLIGHYPPRIAL--RVFHYLHNPNIFPFNAIIRVLAEQGHVSHVF 110
+D ++ R +G + + R+ + +P++ +N ++ L + + ++
Sbjct: 107 FHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIY 166
Query: 111 SLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVY 170
++ D+K PN FT++ LLK ++ A+++ + G D +++
Sbjct: 167 MVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSM 226
Query: 171 ARGFRNVVFARKVFDEIPDRSE--VTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQ- 227
V K E+ +R E V+ + +LI G + + +L MV + + P
Sbjct: 227 CE-----VGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNV 281
Query: 228 --NDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKW--G 283
T+++VL C+S +IE FL++++ CH ++ T+ + G + G
Sbjct: 282 ISYSTLINVL--CNS---GQIELAFSFLTQMLK------RGCHPNIYTLSSLVKGCFLRG 330
Query: 284 NVEKSRERFDR-ISAAG-KRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVT 341
+ + +++ I G + VV +N ++ + G V+ +S+F M + G + PN T
Sbjct: 331 TTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCS-PNIRT 389
Query: 342 MVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVF 401
S+++ A+ G L ++ +++ G N+ ++ T++++ + + A+ +
Sbjct: 390 YGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNV----VVYTNMVEALCRHSKFKEAESLI 445
Query: 402 E----HAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMP-EFGLQPNAGTFLGALSACSH 456
E + V FNA I GL G + A ++F +M + PN T+ L +
Sbjct: 446 EIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAK 505
Query: 457 SGFLERG----RQIFR---DMSFSTSLTLEHYAC 483
+ +E R+IF + S ST TL H +C
Sbjct: 506 ANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSC 539
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 155/377 (41%), Gaps = 32/377 (8%)
Query: 87 NPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCF-RSKDARCAE 145
+PN+ ++ +I VL G + FS + R PN +T S L+K CF R +
Sbjct: 278 SPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALD 337
Query: 146 QVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVF---DEIPDRSEVTCWTSLITG 202
+ I+ G + N LV + N+V A VF +EI + + SLI G
Sbjct: 338 LWNQMIRGFGLQPNVVAYNTLVQGFC-SHGNIVKAVSVFSHMEEIGCSPNIRTYGSLING 396
Query: 203 YAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSA-CSSLEISKIERWVYFLSELIDDST 261
+A+ G + + +++ M+ P +++ A C + + E + +S+
Sbjct: 397 FAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSK------ 450
Query: 262 SNGESCHDSVNTVLVYLFG--KWGNVEKSRERFDRISAAGK--RGVVPWNAMISAYVQDG 317
E+C SV T ++ G G ++ + + F ++ + +V +N ++ +
Sbjct: 451 ---ENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKAN 507
Query: 318 CPVEGLSLFRIMVKEGTTRPNHVTMVSVLSAC-AQIGDLSLGKWVHEYLISIGHKGNIGS 376
E L R + G + + +C A + ++L + V + ++ I
Sbjct: 508 RIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIAL-QLVGKMMVDGKSPDEITM 566
Query: 377 NQILATSLIDMYSKCGRLDRAKEVFE------HAVSKDVVLFNAMIMGLAVNGEGEDALR 430
N I+ Y K G+ +RA ++ + DV+ + +I GL + ED +
Sbjct: 567 NMIILA-----YCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVI 621
Query: 431 LFYKMPEFGLQPNAGTF 447
L +M G+ P+ T+
Sbjct: 622 LLERMISAGIVPSIATW 638
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 119/520 (22%), Positives = 208/520 (40%), Gaps = 71/520 (13%)
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
P FN +I + G + V SL +K AP+ T++ L+ + ++ D A
Sbjct: 331 PTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHC-APDTRTYNILISLHTKNNDIERAGAY 389
Query: 148 HAHIQKMGYLNDPSVSNGLVAVYARGFRNVVF-ARKVFDEIPDRSEVTCWTSLITGYAQS 206
++ G DP L+ YA R++V A + E+ D + I Y QS
Sbjct: 390 FKEMKDDGLKPDPVSYRTLL--YAFSIRHMVEEAEGLIAEMDDDN------VEIDEYTQS 441
Query: 207 GHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLS-ELIDDSTSNGE 265
L M V + LE S W +F + + +S G
Sbjct: 442 A-------LTRMYVEAEM----------------LEKS----WSWFKRFHVAGNMSSEGY 474
Query: 266 SCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAY-VQDGCPVEGLS 324
S + + +G+ G + ++ F KR V+ +N MI AY + C +
Sbjct: 475 SAN-------IDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCE-KACE 526
Query: 325 LFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSL 384
LF M+ G T P+ T +++ A G+ E + G+ S+ I ++
Sbjct: 527 LFESMMSYGVT-PDKCTYNTLVQILASADMPHKGRCYLEKMRETGYV----SDCIPYCAV 581
Query: 385 IDMYSKCGRLDRAKEVF----EHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGL 440
I + K G+L+ A+EV+ E+ + DVV++ +I A G + A+ M E G+
Sbjct: 582 ISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGI 641
Query: 441 QPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSLT----LEHYACYIDLLARVGCIEE 496
N+ + + + G+L+ I+R + S + T + C I+L + + +
Sbjct: 642 PGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRK 701
Query: 497 AIEVVTSMPFK--PNNFVWGALLGGCLLHSRVELAQEVSKRLVEV----DPTSSGGYVML 550
A + SM + N F + +L + R E A +++K++ E+ DP S Y +
Sbjct: 702 AEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLS---YNSV 758
Query: 551 ANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVV 590
A D ++ + EM GI QP S G +
Sbjct: 759 LGLFALDGRFKEAVETFKEMVSSGI--QPDDSTFKSLGTI 796
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 102/487 (20%), Positives = 199/487 (40%), Gaps = 70/487 (14%)
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKV---CFRSKDARCA 144
P+I FN ++ + + V SL ++ + + +TF+ ++ CF+ A
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQ---VSLA 139
Query: 145 EQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFD---EIPDRSEVTCWTSLIT 201
+ + K+GY D LV + R R V A + D EI + ++ + ++I
Sbjct: 140 LSILGKMLKLGYEPDRVTIGSLVNGFCRRNR-VSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 202 GYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSA-CSSLEISKIERWVYFLSELIDDS 260
++ + F + R+ +RP T ++++ C+S RW
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS------SRWS---------- 242
Query: 261 TSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKRGVVPWNAMISAYVQDGCPV 320
+ +R D I V+ ++A++ A+V++G +
Sbjct: 243 -------------------------DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVL 277
Query: 321 EGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQIL 380
E LF MV+ + P+ VT S+++ + + + ++S G ++ S
Sbjct: 278 EAKELFEEMVRM-SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS---- 332
Query: 381 ATSLIDMYSKCGRLDRAKEVF----EHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMP 436
+LI+ + K R++ ++F + + + V +N +I G G+ + A F +M
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392
Query: 437 EFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM-SFSTSLTLEHYACYIDLLARVGCIE 495
FG+ P+ T+ L +G LE+ IF DM L + Y I + + G +E
Sbjct: 393 FFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVE 452
Query: 496 EAIEVVTSMP---FKPNNFVWGALLGGC----LLHSRVELAQEVSKR-LVEVDPTSSGGY 547
EA + S+ KP+ + ++ G LLH L ++ + L++ D T S G
Sbjct: 453 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGD 512
Query: 548 VMLANAL 554
+ L+ L
Sbjct: 513 ITLSAEL 519
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 168/420 (40%), Gaps = 65/420 (15%)
Query: 45 SHLLQIHARIFQLGAHQDNLLATRLIGHYPPR--------IALRVFHYLHNPNIFPFNAI 96
S L I ++ +LG D + L+ + R + ++ + P+I +NAI
Sbjct: 137 SLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAI 196
Query: 97 IRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLK-VCFRSKDARCAEQVHAHIQKMG 155
I L + V+ F F +++ + + PN T++ L+ +C S+ + A + I+K
Sbjct: 197 IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKI 256
Query: 156 YLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRS---EVTCWTSLITGYAQSGHGEEV 212
N + S L A G V+ A+++F+E+ S ++ ++SLI G +E
Sbjct: 257 TPNVITYSALLDAFVKNG--KVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA 314
Query: 213 LQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVN 272
Q+F +MV + C L++++ S N
Sbjct: 315 NQMFDLMVSK--------------GC--------------LADVV------------SYN 334
Query: 273 TVLVYLFGKWGNVEKSRERFDRISAAG-KRGVVPWNAMISAYVQDGCPVEGLSLFRIMVK 331
T L+ F K VE + F +S G V +N +I + Q G + F M
Sbjct: 335 T-LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF 393
Query: 332 EGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKC 391
G + P+ T +L G+L + E + K + + + T++I K
Sbjct: 394 FGIS-PDIWTYNILLGGLCDNGELEKALVIFEDM----QKREMDLDIVTYTTVIRGMCKT 448
Query: 392 GRLDRAKEVF----EHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTF 447
G+++ A +F + D+V + M+ GL G + L+ KM + GL N T
Sbjct: 449 GKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 95/438 (21%), Positives = 187/438 (42%), Gaps = 32/438 (7%)
Query: 52 ARIFQLGAHQDNLLATRLI------GHYPPRIAL--RVFHYLHNPNIFPFNAIIRVLAEQ 103
+I +LG + + + LI G + L R+ H P++ N ++ L
Sbjct: 147 GKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLS 206
Query: 104 GHVSHVFSLFNDLKHRVLAPNDFTFSFLLKV-CFRSKDARCAEQVHAHIQKMGYLNDPSV 162
G + L + + PN T+ +L V C + A E + ++ L+
Sbjct: 207 GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 163 SNGLVAVYARGFRNVVFARKVFDEIPDR---SEVTCWTSLITGYAQSGHGEEVLQLFHMM 219
S + + G + F +F+E+ + + + + LI G+ +G ++ +L M
Sbjct: 267 SIIIDGLCKHGSLDNAF--NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 324
Query: 220 VRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVN-TVLVYL 278
+++ + P N SVL S ++ K+ E+I + D++ T L+
Sbjct: 325 IKRKINP-NVVTFSVLID-SFVKEGKLREAEELHKEMIHRGIA-----PDTITYTSLIDG 377
Query: 279 FGKWGNVEKSRERFDRISAAG-KRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRP 337
F K +++K+ + D + + G + +N +I+ Y + +GL LFR M G
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVV-A 436
Query: 338 NHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRA 397
+ VT +++ ++G L++ K + + ++S NI + +IL L D G ++A
Sbjct: 437 DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN----GESEKA 492
Query: 398 KEVFEH----AVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSA 453
E+FE + D+ ++N +I G+ + +DA LF +P G++P T+ +
Sbjct: 493 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGG 552
Query: 454 CSHSGFLERGRQIFRDMS 471
G L +FR M
Sbjct: 553 LCKKGPLSEAELLFRKME 570
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 111/533 (20%), Positives = 212/533 (39%), Gaps = 71/533 (13%)
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
P + F+ + +A+ V +L ++ + +A N +T S ++ R + A
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 148 HAHIQKMGY----LNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRSEVTCWTSLITGY 203
I K+GY + ++ NGL + R + ++ E+ + ++ +L+ G
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGL-CLEGRVSEALELVDRMV-EMGHKPDLITINTLVNGL 203
Query: 204 AQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSA-CSSLEISKIERWVYFLSELIDDSTS 262
SG E + L MV +P T VL+ C S + + EL+
Sbjct: 204 CLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA-------LAMELLRKMEE 256
Query: 263 NGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG-KRGVVPWNAMISAYVQDGCPVE 321
++++ K G+++ + F+ + G ++ +N +I + G +
Sbjct: 257 RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDD 316
Query: 322 GLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILA 381
G L R M+K PN VT ++ + + G L + +H+ +I H+G I + I
Sbjct: 317 GAKLLRDMIKR-KINPNVVTFSVLIDSFVKEGKLREAEELHKEMI---HRG-IAPDTITY 371
Query: 382 TSLIDMYSKCGRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQ 441
TSLID + K LD+A ++ + VSK G
Sbjct: 372 TSLIDGFCKENHLDKANQMVDLMVSK-------------------------------GCD 400
Query: 442 PNAGTFLGALSACSHSGFLERGRQIFRDMSFS-------TSLTLEHYACYIDLLARVGCI 494
PN TF ++ + ++ G ++FR MS T TL C L ++
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE---LGKLNVA 457
Query: 495 EEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEVSKRL----VEVDPTSSGGYVML 550
+E + + S PN + LL G + E A E+ +++ +E+D G Y ++
Sbjct: 458 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDI---GIYNII 514
Query: 551 ANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDGVVHEFLVGYLSHPQI 603
+ + + + +D L + KG+K + I + G+ + G LS ++
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKK---GPLSEAEL 564
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 179/427 (41%), Gaps = 49/427 (11%)
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
P+I F+ ++ +A+ V S ++ ++ N +T++ L+ R A +
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 148 HAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPD---RSEVTCWTSLITGYA 204
+ K+GY D N L+ + G R + A + D++ + + + +T+LI G
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNR-ISDAVALVDQMVEMGYKPDTVTFTTLIHGLF 194
Query: 205 QSGHGEEVLQLFHMMVRQNLRPQNDTMVSV-------------LSACSSLEISKIERWVY 251
E + L MV++ +P T +V L+ + +E +KIE V
Sbjct: 195 LHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVV 254
Query: 252 FLSELIDDSTSNGESCHDSVN------------TVLVYL--------FGKWGNVEKSRER 291
S +I DS D++N V+ Y +G+W + SR
Sbjct: 255 IYSTVI-DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWS--DASRLL 311
Query: 292 FDRISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQ 351
D I +V ++A+I A+V+ G V+ L+ M+K + PN T S+++
Sbjct: 312 SDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR-SIDPNIFTYSSLINGFCM 370
Query: 352 IGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVF----EHAVSK 407
+ L K + E +I + + N + +LI+ + K R+D+ E+F + +
Sbjct: 371 LDRLGEAKQMLELMI----RKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVG 426
Query: 408 DVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIF 467
+ V + +I G + ++A +F +M G+ PN T+ L +G L + +F
Sbjct: 427 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 486
Query: 468 RDMSFST 474
+ ST
Sbjct: 487 EYLQRST 493
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 138/338 (40%), Gaps = 29/338 (8%)
Query: 303 VVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVH 362
+V N++++ + + ++L MV+ G +P+ VT +++ L L
Sbjct: 148 IVTLNSLLNGFCHGNRISDAVALVDQMVEMGY-KPDTVTFTTLIHG------LFLHNKAS 200
Query: 363 EYLISIGHKGNIGSNQILAT--SLIDMYSKCGRLDRAKEVFEH----AVSKDVVLFNAMI 416
E + I G L T ++++ K G D A + + +VV+++ +I
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 417 MGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM-SFSTS 475
L +DAL LF +M G++PN T+ +S + G ++ DM +
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320
Query: 476 LTLEHYACYIDLLARVGCI---EEAIEVVTSMPFKPNNFVWGALLGGCLLHSRVELAQEV 532
L ++ ID + G + E+ E + PN F + +L+ G + R+ A+++
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQM 380
Query: 533 SKRLVEVDPTSS-GGYVMLANALASDRQWNDVSALRLEMREKGIKKQPGSSWISVDG--- 588
+ ++ D + Y L N ++ + L EM ++G+ + + G
Sbjct: 381 LELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQ 440
Query: 589 --------VVHEFLVGYLSHPQIEGIYLTLTGLAKHMK 618
+V + +V HP I + L GL K+ K
Sbjct: 441 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 478
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 141/309 (45%), Gaps = 17/309 (5%)
Query: 203 YAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDSTS 262
+A G + L+LF M RQ N+ + +++ + + E + E+ D+ S
Sbjct: 115 FAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIM-----ISLLGREGLLDKCLEVFDEMPS 169
Query: 263 NGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG-KRGVVPWNAMISAYVQDGCPVE 321
G S T L+ +G+ G E S E DR+ ++ +N +I+A + G E
Sbjct: 170 QGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWE 229
Query: 322 GL-SLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQIL 380
GL LF M EG +P+ VT ++LSACA G LG E + + G I +
Sbjct: 230 GLLGLFAEMRHEGI-QPDIVTYNTLLSACAIRG---LGDEA-EMVFRTMNDGGIVPDLTT 284
Query: 381 ATSLIDMYSKCGRLDRAKEVFEHAVS----KDVVLFNAMIMGLAVNGEGEDALRLFYKMP 436
+ L++ + K RL++ ++ S D+ +N ++ A +G ++A+ +F++M
Sbjct: 285 YSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ 344
Query: 437 EFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM-SFSTSLTLEHYACYIDLLARVGCIE 495
G PNA T+ L+ SG + RQ+F +M S +T Y I++ G +
Sbjct: 345 AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFK 404
Query: 496 EAIEVVTSM 504
E + + M
Sbjct: 405 EVVTLFHDM 413
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 108/528 (20%), Positives = 198/528 (37%), Gaps = 99/528 (18%)
Query: 24 CSIVDHTPTTFTNLLQGHIPRSHLLQIHARIFQLGAHQDNLLATRLI------GHYPPRI 77
C +H T +LL L++ + G + T LI G Y +
Sbjct: 137 CKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSL 196
Query: 78 AL--RVFHYLHNPNIFPFNAIIRVLAEQG-HVSHVFSLFNDLKHRVLAPNDFTFSFLLKV 134
L R+ + +P+I +N +I A G + LF +++H + P+ T++ LL
Sbjct: 197 ELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSA 256
Query: 135 CFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDRS--- 191
C AE V + G + D + + LV + + R KV D + + +
Sbjct: 257 CAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRR----LEKVCDLLGEMASGG 312
Query: 192 ---EVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIER 248
++T + L+ YA+SG +E + +FH M P +T
Sbjct: 313 SLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTY----------------- 355
Query: 249 WVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERF-DRISAAGKRGVVPWN 307
+VL+ LFG+ G + R+ F + S+ +N
Sbjct: 356 ------------------------SVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYN 391
Query: 308 AMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEY--- 364
+I + + G E ++LF MV+E P+ T ++ AC + G + + +Y
Sbjct: 392 ILIEVFGEGGYFKEVVTLFHDMVEE-NIEPDMETYEGIIFACGKGGLHEDARKILQYMTA 450
Query: 365 --------------------------LISIGHKGNIGSNQILAT--SLIDMYSKCGRLDR 396
L++ +GSN + T SL+ +++ G +
Sbjct: 451 NDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKE 510
Query: 397 AKEVF----EHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALS 452
++ + + + ++ FNA I G+ E+A++ + M + P+ T LS
Sbjct: 511 SEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLS 570
Query: 453 ACSHSGFLERGRQIFRDMSFSTSLTLEHYACYIDLLARVGCIEEAIEV 500
S + ++ R+ F +M S L CY +LA G E +V
Sbjct: 571 VYSFARLVDECREQFEEMKASD--ILPSIMCYCMMLAVYGKTERWDDV 616
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 88/445 (19%), Positives = 177/445 (39%), Gaps = 62/445 (13%)
Query: 74 PPRIAL-RVFHYLHNP-NIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRV-LAPNDFTFSF 130
PPR ++ R N ++ F + + A +G LF ++ ++ PN+ ++
Sbjct: 87 PPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTI 146
Query: 131 LLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNVVFARKVFDEIPDR 190
++ + R +V + G L+ Y R R + ++ D + +
Sbjct: 147 MISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYET-SLELLDRMKNE 205
Query: 191 S---EVTCWTSLITGYAQSG-HGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKI 246
+ + ++I A+ G E +L LF M + ++P T ++LSAC+
Sbjct: 206 KISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAI------ 259
Query: 247 ERWVYFLSELIDDSTSNGESCHD-SVNTVLVYLFGKWGNVEKSRERFDRISAAGK-RGVV 304
R + +E++ + ++G D + + LV FGK +EK + +++ G +
Sbjct: 260 -RGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDIT 318
Query: 305 PWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEY 364
+N ++ AY + G E + +F M G T PN T
Sbjct: 319 SYNVLLEAYAKSGSIKEAMGVFHQMQAAGCT-PNANTY---------------------- 355
Query: 365 LISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFEHAVSK----DVVLFNAMIMGLA 420
+ L++++ + GR D +++F S D +N +I
Sbjct: 356 -----------------SVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFG 398
Query: 421 VNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSL-TLE 479
G ++ + LF+ M E ++P+ T+ G + AC G E R+I + M+ + + + +
Sbjct: 399 EGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSK 458
Query: 480 HYACYIDLLARVGCIEEAIEVVTSM 504
Y I+ + EEA+ +M
Sbjct: 459 AYTGVIEAFGQAALYEEALVAFNTM 483
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 117/259 (45%), Gaps = 14/259 (5%)
Query: 323 LSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILAT 382
L LF+ M ++ +PN ++S + G L V + + S G ++ S T
Sbjct: 125 LRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFS----YT 180
Query: 383 SLIDMYSKCGRLDRAKEVFE----HAVSKDVVLFNAMIMGLAVNG-EGEDALRLFYKMPE 437
+LI+ Y + GR + + E+ + +S ++ +N +I A G + E L LF +M
Sbjct: 181 ALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRH 240
Query: 438 FGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSFSTSL-TLEHYACYIDLLARVGCIEE 496
G+QP+ T+ LSAC+ G + +FR M+ + L Y+ ++ ++ +E+
Sbjct: 241 EGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEK 300
Query: 497 AIEVVTSMPFK---PNNFVWGALLGGCLLHSRVELAQEVSKRLVEVDPT-SSGGYVMLAN 552
+++ M P+ + LL ++ A V ++ T ++ Y +L N
Sbjct: 301 VCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLN 360
Query: 553 ALASDRQWNDVSALRLEMR 571
+++DV L LEM+
Sbjct: 361 LFGQSGRYDDVRQLFLEMK 379
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/474 (21%), Positives = 188/474 (39%), Gaps = 70/474 (14%)
Query: 58 GAHQDNLLATRLIGHYPPRIALRVFHYLHNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLK 117
G QD+L RL+G Y NP+++ NAI+ + + G V+S ++
Sbjct: 177 GMIQDSLEIFRLMGLYG-----------FNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 225
Query: 118 HRVLAPNDFTFSFLLKVCFRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARGFRNV 177
R + P+ TF+ L+ V + + ++K GY N ++ Y + R
Sbjct: 226 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR-F 284
Query: 178 VFARKVFDEIPDR---SEVTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSV 234
A ++ D + + ++V + LI +S + L M ++ + P T ++
Sbjct: 285 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 344
Query: 235 LSACSSLEISKIERWVYFLSELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDR 294
++ S+ E V S+L+++ S G S +
Sbjct: 345 INGFSN------EGKVLIASQLLNEMLSFGLSPNH------------------------- 373
Query: 295 ISAAGKRGVVPWNAMISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGD 354
V +NA+I ++ +G E L +F +M +G T P+ V+ +L + +
Sbjct: 374 ---------VTFNALIDGHISEGNFKEALKMFYMMEAKGLT-PSEVSYGVLLDGLCKNAE 423
Query: 355 LSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRA----KEVFEHAVSKDVV 410
L + + + + + +I T +ID K G LD A E+ + + D+V
Sbjct: 424 FDLARGFYMRM----KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIV 479
Query: 411 LFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM 470
++A+I G G + A + ++ GL PN + + C G L+ +I+ M
Sbjct: 480 TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAM 539
Query: 471 SFSTSLTLEHYA--CYIDLLARVGCIEEAIE---VVTSMPFKPNNFVWGALLGG 519
T +H+ + L + G + EA E +TS PN + L+ G
Sbjct: 540 ILEGH-TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLING 592
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 104/501 (20%), Positives = 194/501 (38%), Gaps = 37/501 (7%)
Query: 27 VDHTPTTFTNLLQGHIPRSHLL---QIHARIFQLGAHQDNLLATRLIGHYPP----RIAL 79
+D T++ L+ G +I RI+++G + ++ + LI + + A+
Sbjct: 474 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 533
Query: 80 RVFHYL----HNPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVC 135
R++ + H + F FN ++ L + G V+ + + PN +F L+
Sbjct: 534 RIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY 593
Query: 136 FRSKDARCAEQVHAHIQKMGYLNDPSVSNGLVAVYARG--FRNVVFARKVFDEIPDRSEV 193
S + A V + K+G+ L+ +G R K +P +
Sbjct: 594 GNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT 653
Query: 194 TCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSA-CSSLEISKIERWVYF 252
+ +L+T +SG+ + + LF MV++++ P + T S++S C K + F
Sbjct: 654 VMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK---GKTVIAILF 710
Query: 253 LSELIDDSTSNGESCHDSVNTVL----VYLFGKWGNVEKSRERFDRISAAGKRGVVPWNA 308
E + + G + V ++ G+W RE+ D + +V NA
Sbjct: 711 AKE----AEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD--IVTTNA 764
Query: 309 MISAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISI 368
MI Y + G +E + + PN T +L ++ D+S ++ +I
Sbjct: 765 MIDGYSRMG-KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN 823
Query: 369 GHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFE----HAVSKDVVLFNAMIMGLAVNGE 424
G I +++ SL+ + L+ ++ + V D FN +I NGE
Sbjct: 824 G----ILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGE 879
Query: 425 GEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDMSF-STSLTLEHYAC 483
A L M G+ + T +S + + + R + +MS S Y
Sbjct: 880 INWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIG 939
Query: 484 YIDLLARVGCIEEAIEVVTSM 504
I+ L RVG I+ A V M
Sbjct: 940 LINGLCRVGDIKTAFVVKEEM 960
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 160/367 (43%), Gaps = 16/367 (4%)
Query: 87 NPNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQ 146
+PN+ + +I+ L + G + F ++ + R + P+ T+S L+ + + R
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447
Query: 147 VHAHIQKMGYLNDPSVSNGLVAVYARG---FRNVVFARKVFDEIPDRSEVTCWTSLITGY 203
++ + KMGY D + LV ++ + F+ K+ + R V + SLI G+
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ-SIRLNVVVFNSLIDGW 506
Query: 204 AQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLS-ELIDDSTS 262
+ +E L++F +M ++P T +V+ S +E + + + +L D
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV-SIMEDAFCKHMKPTIGLQLFDLMQR 565
Query: 263 NGESCHDSVNTVLVYLFGKWGNVEKSRERFDR-ISAAGKRGVVPWNAMISAYVQDGCPVE 321
N S +V V+++L K +E + + F+ I + +V +N MI Y E
Sbjct: 566 NKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDE 625
Query: 322 GLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILA 381
+F ++ K PN VT+ ++ + D+ + + G K N +
Sbjct: 626 AERIFELL-KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK----PNAVTY 680
Query: 382 TSLIDMYSKC----GRLDRAKEVFEHAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPE 437
L+D +SK G +E+ E +S +V ++ +I GL G ++A +F++ +
Sbjct: 681 GCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAID 740
Query: 438 FGLQPNA 444
L P+
Sbjct: 741 AKLLPDV 747
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 110/493 (22%), Positives = 197/493 (39%), Gaps = 60/493 (12%)
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
PN+ F +I ++G + F LF ++ R + P+ +S L+ F++ ++
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 148 HAHIQKMGYLNDPSVSNGLVAVYAR----GFRNVVFARKVFDEIPDRSEVTCWTSLITGY 203
+ G D V + + VY + +VV+ R + I V +T LI G
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS--PNVVTYTILIKGL 401
Query: 204 AQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSA---CSSL--------EISKI--ERWV 250
Q G E ++ ++++ + P T S++ C +L ++ K+ V
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 251 YFLSELIDDSTSNGESCHD---SVN--------TVLVY--LFGKWGNVEKSRERFDRISA 297
L+D + G H SV V+V+ L W + + E
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 298 AGKRGVVPWNA----------MISAYVQDGCPVEGLSLFRIMVKEGTTRPNHV--TMVSV 345
G G+ P A M A+ + P GL LF +M + + V ++ +
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHL 581
Query: 346 LSACAQIGDLSLGKWVHEYLISIGHKGNIGSNQILATSLIDMYSKCGRLDRAKEVFE--- 402
L C +I D S K+ + + +G + + + ++I Y RLD A+ +FE
Sbjct: 582 LFKCHRIEDAS--KFFNNLI-----EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK 634
Query: 403 -HAVSKDVVLFNAMIMGLAVNGEGEDALRLFYKMPEFGLQPNAGTFLGALSACSHSGFLE 461
+ V +I L N + + A+R+F M E G +PNA T+ + S S +E
Sbjct: 635 VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIE 694
Query: 462 RGRQIFRDM-SFSTSLTLEHYACYIDLLARVGCIEEAIEV---VTSMPFKPNNFVWGALL 517
++F +M S ++ Y+ ID L + G ++EA + P+ + L+
Sbjct: 695 GSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 754
Query: 518 GG-CLLHSRVELA 529
G C + VE A
Sbjct: 755 RGYCKVGRLVEAA 767
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/404 (21%), Positives = 178/404 (44%), Gaps = 35/404 (8%)
Query: 193 VTCWTSLITGYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYF 252
V + +LI G+ + G + LF +M ++ + P L A S+L + +
Sbjct: 286 VVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPD-------LIAYSTLIDGYFKAGMLG 338
Query: 253 LS-ELIDDSTSNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAG-KRGVVPWNAMI 310
+ +L + G V + + ++ K G++ + + R+ G VV + +I
Sbjct: 339 MGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILI 398
Query: 311 SAYVQDGCPVEGLSLFRIMVKEGTTRPNHVTMVSVLSACAQIGDLSLGKWVHEYLISIGH 370
QDG E ++ ++K G P+ VT S++ + G+L G ++E +I +G+
Sbjct: 399 KGLCQDGRIYEAFGMYGQILKRGM-EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 371 KGNIGSNQILATSLIDMYSKCGRLDRAK----EVFEHAVSKDVVLFNAMIMGLAVNGEGE 426
++ ++ L+D SK G + A ++ ++ +VV+FN++I G +
Sbjct: 458 PPDV----VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 427 DALRLFYKMPEFGLQPNAGTFLGALSA-------CSHSGFLERGRQIFRDMSFSTSLTLE 479
+AL++F M +G++P+ TF + C H G Q+F D+ ++ +
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMK-PTIGLQLF-DLMQRNKISAD 571
Query: 480 HYAC--YIDLLARVGCIEEAIEVVTSM---PFKPNNFVWGALLGGCLLHSRVELAQEVSK 534
C I LL + IE+A + ++ +P+ + ++ G R++ A+ + +
Sbjct: 572 IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE 631
Query: 535 RLVEVDP--TSSGGYVMLANALASDRQWNDVSALRLEMREKGIK 576
L++V P ++ +L + L + + + M EKG K
Sbjct: 632 -LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 674
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 101/505 (20%), Positives = 207/505 (40%), Gaps = 67/505 (13%)
Query: 88 PNIFPFNAIIRVLAEQGHVSHVFSLFNDLKHRVLAPNDFTFSFLLKVCFRSKDARCAEQV 147
P++F +N +IR E + L N++K + + T+ L+ ++ A
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234
Query: 148 HAHIQKMGYLNDPSVSNGLVAVYARGFRN---VVFARKVFDEIPDRSEVTC---WTSLIT 201
++ MG D V L+ RGF + + + +FDE+ +R + C + +LI
Sbjct: 235 LKEMKFMGLEADLVVYTSLI----RGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIR 290
Query: 202 GYAQSGHGEEVLQLFHMMVRQNLRPQNDTMVSVLSACSSLEISKIERWVYFLSELIDDST 261
G+ + G +E ++F M+ + +RP T ++ + K + + L+ +I+
Sbjct: 291 GFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCG--VGKTKEALQLLNLMIE--- 345
Query: 262 SNGESCHDSVNTVLVYLFGKWGNVEKSRERFDRISAAGKR-GVVPWNAMISAYVQDGCPV 320
E + +++ K G V + E + + R + +N ++ G
Sbjct: 346 -KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLD 404
Query: 321 EGLSLFRIMVKEGT-TRPNHVTMVSVLSACAQIGDLSLGKWVHEYLI-SIGHKGNIGSNQ 378
E L +M+K+ + T P+ ++ +++ + L +++ L+ +G + +N
Sbjct: 405 EASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI 464
Query: 379 ILATSLIDMYSKCGRLDRAKEVFEHAVSKDVV----LFNAMIMGLAVNGEGEDALRLFYK 434
+L ++L K G +++A E+++ +V + AMI G G A L K
Sbjct: 465 LLNSTL-----KAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCK 519
Query: 435 MPEFGLQPNAGTFLGALSACSHSGFLERGRQIFRDM----------SFST---------- 474
M LQP+ + LS+ G L++ ++F +M SF+
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579
Query: 475 ----------------SLTLEHYACYIDLLARVGCIEEAIEVVTSM---PFKPNNFVWGA 515
S L Y+ I+ ++G ++EAI M F+P+ + +
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDS 639
Query: 516 LLGGCLLHSRVELAQEVSKRLVEVD 540
+L C+ + E+ K+LV+ D
Sbjct: 640 VLKYCISQGETDKLTELVKKLVDKD 664