Miyakogusa Predicted Gene

Lj5g3v2112040.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2112040.1 Non Chatacterized Hit- tr|B7FMC0|B7FMC0_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,88.26,0,Thioredoxin,Thioredoxin domain; coiled-coil,NULL; seg,NULL;
Thioredoxin-like,Thioredoxin-like fold; ,CUFF.56695.1
         (213 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G18990.1 | Symbols: TXND9 | thioredoxin domain-containing pro...   304   3e-83
AT3G25580.1 | Symbols:  | Thioredoxin superfamily protein | chr3...   303   4e-83
AT5G66410.1 | Symbols: PLP3b | phosducin-like protein 3 homolog ...   119   2e-27
AT3G50960.1 | Symbols: PLP3a | phosducin-like protein 3 homolog ...   114   3e-26

>AT2G18990.1 | Symbols: TXND9 | thioredoxin domain-containing
           protein 9 homolog | chr2:8238851-8239932 REVERSE
           LENGTH=211
          Length = 211

 Score =  304 bits (778), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 148/208 (71%), Positives = 172/208 (82%), Gaps = 1/208 (0%)

Query: 6   IQEVIEKQVLTVVQAVEDKIDDEISAXXXXXXXXXXXXXXXXXHQMKKMAEKRNRWISLG 65
           IQE++EKQVLTV +A+EDKIDDEI++                  QMKKMAEK+ RWISLG
Sbjct: 5   IQEILEKQVLTVAKAMEDKIDDEIASLEKLDEDDLEVLRERRLKQMKKMAEKKKRWISLG 64

Query: 66  HGDYSELPSEKDFFSVVKASDRVVCHFFRENWPCKVADKHLGVLAKQHIETRFVKINAEK 125
           HG+YSE+ SEKDFFSVVKAS+RVVCHF+RENWPCKV DKH+ +LAKQHIETRFVKI AEK
Sbjct: 65  HGEYSEIHSEKDFFSVVKASERVVCHFYRENWPCKVMDKHMSILAKQHIETRFVKIQAEK 124

Query: 126 SPFLAEKLKITVLPTLALIKNAKVDDYVVGFDELGGTDDFSTEDLEERLAKAQVIFLEGE 185
           SPFLAE+LKI VLPTLALIKN KVDDYVVGF+ELGG DDFSTEDLEER+A+AQVI  +GE
Sbjct: 125 SPFLAERLKIVVLPTLALIKNTKVDDYVVGFNELGGKDDFSTEDLEERIARAQVIHYDGE 184

Query: 186 SSIHQARSTAQSKRSVRQATRADSSDSE 213
           SS  + +ST Q +R+VRQ+ R+D SDSE
Sbjct: 185 SSSLKPKSTTQVRRNVRQSARSD-SDSE 211


>AT3G25580.1 | Symbols:  | Thioredoxin superfamily protein |
           chr3:9292557-9294148 FORWARD LENGTH=210
          Length = 210

 Score =  303 bits (777), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 148/208 (71%), Positives = 173/208 (83%), Gaps = 2/208 (0%)

Query: 6   IQEVIEKQVLTVVQAVEDKIDDEISAXXXXXXXXXXXXXXXXXHQMKKMAEKRNRWISLG 65
           IQE+IEKQVLTV +A+EDKIDDEI++                  QMKKMAEK+ RW+S+G
Sbjct: 5   IQEIIEKQVLTVAKAMEDKIDDEIASLEKLDEDDLEVLRERRLKQMKKMAEKKKRWMSIG 64

Query: 66  HGDYSELPSEKDFFSVVKASDRVVCHFFRENWPCKVADKHLGVLAKQHIETRFVKINAEK 125
           HG+YSE+ SEKDFFSVVK+S+RVVCHF+RENWPCKV DKH+ +LAKQHIETRFVKI AEK
Sbjct: 65  HGEYSEIHSEKDFFSVVKSSERVVCHFYRENWPCKVMDKHMSILAKQHIETRFVKIQAEK 124

Query: 126 SPFLAEKLKITVLPTLALIKNAKVDDYVVGFDELGGTDDFSTEDLEERLAKAQVIFLEGE 185
           SPFLAE+LKI VLPTLALIKN KVDDYVVGF+ELGG DDFSTEDLEER+A+AQVI  EGE
Sbjct: 125 SPFLAERLKIVVLPTLALIKNTKVDDYVVGFNELGGKDDFSTEDLEERIARAQVIHYEGE 184

Query: 186 SSIHQARSTAQSKRSVRQATRADSSDSE 213
           SS+ Q +ST Q +R+VRQ+ R+D SDSE
Sbjct: 185 SSLKQ-KSTTQVRRNVRQSARSD-SDSE 210


>AT5G66410.1 | Symbols: PLP3b | phosducin-like protein 3 homolog |
           chr5:26519909-26521459 FORWARD LENGTH=230
          Length = 230

 Score =  119 bits (297), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/161 (39%), Positives = 95/161 (59%), Gaps = 3/161 (1%)

Query: 51  MKKMAEKRNRWISLGHGDYSELPSEKDFFSVVKASDRVVCHFF-RENWPCKVADKHLGVL 109
           +++  EKR  +   GHG+Y E+ SE DF   V  S++V+CHF+ +E + CK+ DKHL  L
Sbjct: 68  LRREVEKREAFKRQGHGEYREV-SEGDFLGEVTRSEKVICHFYHKEFYRCKIMDKHLKTL 126

Query: 110 AKQHIETRFVKINAEKSPFLAEKLKITVLPTLALIKNAKVDDYVVGFDELGGTDDFSTED 169
           A +H++T+F+K++AE +PF   KL I  LP + L       D +VGF +LG  DDFST  
Sbjct: 127 APRHVDTKFIKMDAENAPFFVTKLAIKTLPCVILFSKGIAMDRLVGFQDLGAKDDFSTTK 186

Query: 170 LEERLAKAQVIFLEGESSIHQARSTAQS-KRSVRQATRADS 209
           LE  L K  ++  + +    +     +S +RSVR +   DS
Sbjct: 187 LENLLVKKGMLSEKRKEEDEEDYEYQESIRRSVRSSANVDS 227


>AT3G50960.1 | Symbols: PLP3a | phosducin-like protein 3 homolog |
           chr3:18938891-18940226 REVERSE LENGTH=230
          Length = 230

 Score =  114 bits (286), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 54/122 (44%), Positives = 78/122 (63%), Gaps = 2/122 (1%)

Query: 51  MKKMAEKRNRWISLGHGDYSELPSEKDFFSVVKASDRVVCHFF-RENWPCKVADKHLGVL 109
           +K+  EKR  +   GHG+Y E+ SE DF   V  S++V+CHF+ +E + CK+ DKHL  L
Sbjct: 68  LKREVEKRESFKRQGHGEYREV-SEGDFLGEVTRSEKVICHFYHKEFYRCKIMDKHLKTL 126

Query: 110 AKQHIETRFVKINAEKSPFLAEKLKITVLPTLALIKNAKVDDYVVGFDELGGTDDFSTED 169
           A +H++T+F+K++AE +PF   KL I  LP + L       D +VGF +LG  DDF+T  
Sbjct: 127 APRHVDTKFIKVDAENAPFFVTKLAIKTLPCVVLFSKGVAMDRLVGFQDLGTKDDFTTNK 186

Query: 170 LE 171
           LE
Sbjct: 187 LE 188