Miyakogusa Predicted Gene
- Lj5g3v2112020.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2112020.1 Non Chatacterized Hit- tr|I1NG04|I1NG04_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,80.88,0,WD40
repeat-like,WD40-repeat-containing domain; RNI-like,NULL; WD40,WD40
repeat; no description,NULL,CUFF.56691.1
(806 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G34280.1 | Symbols: | transducin family protein / WD-40 repe... 777 0.0
AT5G08390.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 63 8e-10
AT1G61210.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 60 6e-09
AT5G23430.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 60 6e-09
AT5G23430.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 60 6e-09
AT1G61210.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 60 7e-09
AT5G64730.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 59 2e-08
AT1G11160.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 56 1e-07
AT3G49660.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 51 3e-06
AT2G43770.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 51 4e-06
>AT4G34280.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr4:16407084-16410644 FORWARD
LENGTH=783
Length = 783
Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/818 (51%), Positives = 533/818 (65%), Gaps = 53/818 (6%)
Query: 3 VDIQTLEDRYIGFCRSHGASPSPAILSSFYKAEVKKSRQELCVLEIVIDDICDFDFAPLL 62
+I TLE++YI C+ HG P+ AILS+F++AEVKKSR + C++ + +D + D+ PLL
Sbjct: 5 TEIATLEEKYIELCKMHGILPNTAILSAFFEAEVKKSRNQRCIMNLYVDRVKYDDYLPLL 64
Query: 63 DTCMNLDASEIEAVDVRNESSCLLNGECAFSLLRAINQKLRVVELQDVSFGNDFLRDISQ 122
+ C ++ SE++ +D+ S+C L A L+R++NQKLRVV L D SFG +F +D+
Sbjct: 65 ELCNEINTSEVQGIDLFVRSACSLEDHYALPLIRSVNQKLRVVHLHD-SFGKNFWQDVFF 123
Query: 123 RGLACQVLTLRSSRFRKLNLMGEFMHMHTLNLDFSSSLTSFDEDCFNCMPNLRCLSMCET 182
+GL+C+VL +RS KLN++GEF +HTL LD + + F EDCF+CMP L LSMC+T
Sbjct: 124 QGLSCKVLNVRSMHIHKLNIVGEFTQLHTLILD-KNRIVGFGEDCFSCMPKLTYLSMCDT 182
Query: 183 RITNLWTTVAALSKLPSLVELRFQYWQYCXXXXXXXXXXXXXXXXTADFN-LLERVPFVG 241
+++LWT+ AAL KLPSL ELRFQ W C D N +E P V
Sbjct: 183 LVSDLWTSAAALLKLPSLKELRFQIWISCSDSSPLNSESSPSSSTKDDINTFIESDPPVE 242
Query: 242 EFCTDTRELTDPN--AEDPLRNFYSFGEEAIDHDIQSMVEDSSD-DSEIGCTRHHHRSWL 298
D E DP+ E+ L + D + + D DS +
Sbjct: 243 ADMWDVAEQMDPSLPVEETLHSM----------DFSYKIPEQDDLDSHVS---------- 282
Query: 299 SDVFPGWNLQVPLQNEF---TLRNEDEEDSSQGSFTGHIADVSMKYMSRHASPICHEKHY 355
V G N +V ++ + + + ++ S +FT +V +KY+S ASPIC EKHY
Sbjct: 283 --VSAGLNGEVLMREKVRRGKMPYQPKDVSPVDTFTRQFGNVGLKYISSKASPICSEKHY 340
Query: 356 REFMIASLPNLKNLDNVPIRKTDKERATGIFSEYFEYLPYRWKHKESVVSILQKREIKSG 415
R +MI SLP L+ LDN+ IRK+D+++A +S FE LPY+ K KESVV +L+ RE +S
Sbjct: 341 RMYMINSLPKLQVLDNLAIRKSDRDKAIETYSANFEDLPYKRK-KESVVRVLENREKRSS 399
Query: 416 HIKVQSSKRSPPYPSGNSQYFYTRSLSAAKLGSSTWPFLHPLSLLGC-----DLGKGFRP 470
G SQ Y RSL AAK+GS P LH L L D P
Sbjct: 400 --------------KGKSQNSYKRSLCAAKMGSPASPLLHSLPFLSSRIQQEDDNSRLCP 445
Query: 471 RQFEYHPSDSSLMVFGTLDGEVVVINHENEHIVSYIPSLGAMNSVLGLCWLKKYPSKLIA 530
RQFEYHP D SLMVFGTLDGEVVV+NHE+ I YIPS G+ +++LGLCWLK YPS +IA
Sbjct: 446 RQFEYHPLDPSLMVFGTLDGEVVVLNHESGKIFRYIPSNGSQSTILGLCWLKIYPSMVIA 505
Query: 531 GSDNGSLKLYDIHQVPRKITSIYGNSGCVT-FDEFDQLTSVHVNATDELFLASGYSKNVA 589
GS NGSLKLYDI + +T+ ++ FDEFDQLTSVH N+TD+LFLASGYSK+VA
Sbjct: 506 GSANGSLKLYDIQKASSTVTTSSHSTSGSVTFDEFDQLTSVHANSTDQLFLASGYSKDVA 565
Query: 590 LYDINSGKRLQVFTDMHQGHINVVKFANHSPSIFATSSFDQDVKMWDLRQKPIHPCFTAS 649
LYDI G RLQVF +MHQ HINVVKF+NHSP +FATSSFD+DVK+WDLRQ+P PC+TAS
Sbjct: 566 LYDIGRGTRLQVFANMHQEHINVVKFSNHSPFLFATSSFDKDVKLWDLRQEPSRPCYTAS 625
Query: 650 SSKGNVMVCFSPDDQYILASAVDNEVRQFLAVDGRLHLVFDIAPTESSQNYTRSYYMNGR 709
S+KGNVMVCFSPDD+Y+LASAVDNEVRQ L VDGRLHL F+I P SS NYTRSYYMNG
Sbjct: 626 STKGNVMVCFSPDDRYLLASAVDNEVRQLLTVDGRLHLNFEIVPRVSSMNYTRSYYMNGN 685
Query: 710 DYIISGSCDEHIVRICCAQTGRRLRDISLEGR-SLGSSMFVQSLRGDPFRDFNMSVLAAY 768
DYIISGSCDE+++R+CCAQTGRRLRD++LEG S S M+VQSLRGDPFRDFNMSVLAAY
Sbjct: 686 DYIISGSCDENVIRVCCAQTGRRLRDVTLEGNGSDFSMMYVQSLRGDPFRDFNMSVLAAY 745
Query: 769 MRPGSKSEIVKVNLLXXXXXXXXXXXXQRPCLSHSMGA 806
R S SEIVKVNLL R S SMG
Sbjct: 746 ARSSSLSEIVKVNLLASRDSTAEESHGLRSYPSSSMGG 783
>AT5G08390.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:2701448-2706910 FORWARD LENGTH=839
Length = 839
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 522 KKYPSKLIAGSDNGSLKLYDIHQVPRKITSIYGNSGCVTFDEFDQLTSVHVNATDELFLA 581
+K L+ G ++ + L+ I + P I S+YG+S + FD A++ L A
Sbjct: 26 RKSSRVLVTGGEDHKVNLWAIGK-PNAILSLYGHSSGIDSVTFD--------ASEGLVAA 76
Query: 582 SGYSKNVALYDINSGKRLQVFTDMHQGHINVVKFANHSP--SIFATSSFDQDVKMWDLRQ 639
S + L+D+ K ++ T GH + N P FA+ S D ++K+WD+R+
Sbjct: 77 GAASGTIKLWDLEEAKVVRTLT----GHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRK 132
Query: 640 KPIHPCFTASSSKGNVMVCFSPDDQYILASAVDNEVRQFLAVDGRL 685
K + + NV+ F+PD ++I++ DN V+ + G+L
Sbjct: 133 KGCIHTYKGHTRGVNVLR-FTPDGRWIVSGGEDNVVKVWDLTAGKL 177
>AT1G61210.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:22564785-22571555 FORWARD LENGTH=1179
Length = 1179
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 522 KKYPSKLIAGSDNGSLKLYDIHQVPRKITSIYGNSGCVTFDEFDQLTSVHVNATDELFLA 581
KK I G D+ + L+ I + P + S+ G++ V SV ++ + L LA
Sbjct: 25 KKTSRLFITGGDDYKVNLWAIGK-PTSLMSLCGHTSAVD--------SVAFDSAEVLVLA 75
Query: 582 SGYSKNVALYDINSGKRLQVFTDMHQGHINVVKFANHSPSIFATSSFDQDVKMWDLRQKP 641
S + L+D+ K ++ FT H+ + + V+F A+ S D ++K+WD+R+K
Sbjct: 76 GASSGVIKLWDVEEAKMVRAFTG-HRSNCSAVEFHPFG-EFLASGSSDANLKIWDIRKKG 133
Query: 642 IHPCFTASSSKGNVMVCFSPDDQYILASAVDNEVRQFLAVDGRL 685
+ S +G + F+PD +++++ +DN V+ + G+L
Sbjct: 134 CIQTYKGHS-RGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKL 176
>AT5G23430.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:7894073-7899862 REVERSE LENGTH=836
Length = 836
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 12/168 (7%)
Query: 522 KKYPSKLIAGSDNGSLKLYDIHQVPRKITSIYGNSGCVTFDEFDQLTSVHVNATDELFLA 581
+K L+ G ++ + L+ I + P I S+YG+S + FD A++ L A
Sbjct: 26 RKSSRVLVTGGEDHKVNLWAIGK-PNAILSLYGHSSGIDSVTFD--------ASEVLVAA 76
Query: 582 SGYSKNVALYDINSGKRLQVFTDMHQGHINVVKFANHSPSIFATSSFDQDVKMWDLRQKP 641
S + L+D+ K ++ T H+ + V F FA+ S D ++K+WD+R+K
Sbjct: 77 GAASGTIKLWDLEEAKIVRTLTG-HRSNCISVDFHPFG-EFFASGSLDTNLKIWDIRKKG 134
Query: 642 IHPCFTASSSKGNVMVCFSPDDQYILASAVDNEVRQFLAVDGRLHLVF 689
+ + NV+ F+PD +++++ DN V+ + G+L F
Sbjct: 135 CIHTYKGHTRGVNVLR-FTPDGRWVVSGGEDNIVKVWDLTAGKLLTEF 181
>AT5G23430.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:7894073-7899862 REVERSE LENGTH=837
Length = 837
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 12/168 (7%)
Query: 522 KKYPSKLIAGSDNGSLKLYDIHQVPRKITSIYGNSGCVTFDEFDQLTSVHVNATDELFLA 581
+K L+ G ++ + L+ I + P I S+YG+S + FD A++ L A
Sbjct: 26 RKSSRVLVTGGEDHKVNLWAIGK-PNAILSLYGHSSGIDSVTFD--------ASEVLVAA 76
Query: 582 SGYSKNVALYDINSGKRLQVFTDMHQGHINVVKFANHSPSIFATSSFDQDVKMWDLRQKP 641
S + L+D+ K ++ T H+ + V F FA+ S D ++K+WD+R+K
Sbjct: 77 GAASGTIKLWDLEEAKIVRTLTG-HRSNCISVDFHPFG-EFFASGSLDTNLKIWDIRKKG 134
Query: 642 IHPCFTASSSKGNVMVCFSPDDQYILASAVDNEVRQFLAVDGRLHLVF 689
+ + NV+ F+PD +++++ DN V+ + G+L F
Sbjct: 135 CIHTYKGHTRGVNVLR-FTPDGRWVVSGGEDNIVKVWDLTAGKLLTEF 181
>AT1G61210.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:22564785-22571555 FORWARD LENGTH=1181
Length = 1181
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 522 KKYPSKLIAGSDNGSLKLYDIHQVPRKITSIYGNSGCVTFDEFDQLTSVHVNATDELFLA 581
KK I G D+ + L+ I + P + S+ G++ V SV ++ + L LA
Sbjct: 25 KKTSRLFITGGDDYKVNLWAIGK-PTSLMSLCGHTSAVD--------SVAFDSAEVLVLA 75
Query: 582 SGYSKNVALYDINSGKRLQVFTDMHQGHINVVKFANHSPSIFATSSFDQDVKMWDLRQKP 641
S + L+D+ K ++ FT H+ + + V+F A+ S D ++K+WD+R+K
Sbjct: 76 GASSGVIKLWDVEEAKMVRAFTG-HRSNCSAVEFHPFG-EFLASGSSDANLKIWDIRKKG 133
Query: 642 IHPCFTASSSKGNVMVCFSPDDQYILASAVDNEVRQFLAVDGRL 685
+ S +G + F+PD +++++ +DN V+ + G+L
Sbjct: 134 CIQTYKGHS-RGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKL 176
>AT5G64730.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:25873146-25875021 FORWARD LENGTH=299
Length = 299
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Query: 566 QLTSVHVNATDELFLASGYSKNVALYDINSGKRLQVFTDMHQGHINVVKFANHSPSIFAT 625
++ VHV + + F + G + V +D+++G+ ++ F H G +N VKF N S S+ +
Sbjct: 62 EVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRG-HDGEVNAVKF-NDSSSVVVS 119
Query: 626 SSFDQDVKMWDLRQKPIHPCFTASSSKGNVMVCFSPDDQYILASAVDNEVRQFLAVDGR 684
+ FD+ +++WD R + P + VM + I+ +VD VR F GR
Sbjct: 120 AGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKTE-IIGGSVDGTVRTFDMRIGR 177
>AT1G11160.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:3733406-3739363 FORWARD LENGTH=1021
Length = 1021
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 522 KKYPSKLIAGSDNGSLKLYDIHQVPRKITSIYGNSGCVTFDEFDQLTSVHVNATDELFLA 581
KK L+ G D+ + L+ I + + S+ G++ V SV N+ + L LA
Sbjct: 25 KKTSRLLLTGGDDYKVNLWSIGKTTSPM-SLCGHTSPVD--------SVAFNSEEVLVLA 75
Query: 582 SGYSKNVALYDINSGKRLQVFTDMHQGHINVVKFANHSPSIFATSSFDQDVKMWDLRQKP 641
S + L+D+ K ++ FT H+ + + V+F A+ S D ++++WD R+K
Sbjct: 76 GASSGVIKLWDLEESKMVRAFTG-HRSNCSAVEFHPFG-EFLASGSSDTNLRVWDTRKKG 133
Query: 642 IHPCFTASSSKGNVMVCFSPDDQYILASAVDNEVRQFLAVDGRL 685
+ + +G + FSPD +++++ +DN V+ + G+L
Sbjct: 134 CIQTYKGHT-RGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKL 176
>AT3G49660.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:18413690-18415223 FORWARD LENGTH=317
Length = 317
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 528 LIAGSDNGSLKLYDIHQVPRKITSIYGNSG---CVTFDEFDQLTSVHVNATDELFLASGY 584
+++ SD+ +LKL+D+ + I ++ G++ CV F N + ++ +
Sbjct: 86 IVSASDDKTLKLWDV-ETGSLIKTLIGHTNYAFCVNF-----------NPQSNMIVSGSF 133
Query: 585 SKNVALYDINSGKRLQVFTDMHQGHINVVKFANHSPSIFATSSFDQDVKMWDLRQKPIHP 644
+ V ++D+ +GK L+V H + V F N S+ +SS+D ++WD
Sbjct: 134 DETVRIWDVTTGKCLKVL-PAHSDPVTAVDF-NRDGSLIVSSSYDGLCRIWDSGTGHCVK 191
Query: 645 CFTASSSKGNVMVCFSPDDQYILASAVDNEVR 676
+ V FSP+ ++IL +DN +R
Sbjct: 192 TLIDDENPPVSFVRFSPNGKFILVGTLDNTLR 223
>AT2G43770.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr2:18134272-18135303 REVERSE LENGTH=343
Length = 343
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 25/167 (14%)
Query: 519 CWLKKYPSKLIAGSDNGSLKLYDIHQVPRKITSIYGNSGCVTFDEFDQLTSVHV-NATDE 577
C ++ P +I+GSD+G+ KL+D+ Q TF + Q+T+V +A D+
Sbjct: 145 CPTRRGPPLIISGSDDGTAKLWDMRQ----------RGAIQTFPDKYQITAVSFSDAADK 194
Query: 578 LFLASGYSKNVALYDINSGKRLQVFTDMHQGHINVVKFANHSP--SIFATSSFDQDVKMW 635
+F G +V ++D+ G+ +GH + + + SP S T+ D + +W
Sbjct: 195 IFTG-GVDNDVKVWDLRKGEATMTL----EGHQDTITGMSLSPDGSYLLTNGMDNKLCVW 249
Query: 636 DLRQ-KPIHPCFTASSS-----KGNVMVC-FSPDDQYILASAVDNEV 675
D+R P + C + N++ C +SPD + A + D V
Sbjct: 250 DMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMV 296