Miyakogusa Predicted Gene
- Lj5g3v2111990.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2111990.1 Non Chatacterized Hit- tr|C5Y420|C5Y420_SORBI
Putative uncharacterized protein Sb05g002040
OS=Sorghu,27,2e-18,TPR-like,NULL; PPR_2,Pentatricopeptide repeat;
PPR_1,Pentatricopeptide repeat; PPR,Pentatricopeptide,CUFF.56684.1
(555 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 813 0.0
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 431 e-121
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 5e-57
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 1e-53
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 206 3e-53
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 8e-53
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 2e-51
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 2e-51
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 199 5e-51
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 199 6e-51
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 199 6e-51
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 8e-51
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 197 1e-50
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 196 3e-50
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 196 3e-50
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 3e-50
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 8e-50
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 194 2e-49
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 2e-49
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 2e-49
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 192 5e-49
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 192 6e-49
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 7e-49
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 9e-49
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 9e-49
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 190 2e-48
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 190 2e-48
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 3e-48
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 3e-48
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 3e-48
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 5e-48
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 188 9e-48
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 1e-47
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 186 3e-47
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 186 4e-47
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 4e-47
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 4e-47
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 5e-47
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 9e-47
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 184 2e-46
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 2e-46
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 183 3e-46
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 4e-46
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 6e-46
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 1e-45
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 181 2e-45
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 178 9e-45
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 1e-44
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 2e-44
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 176 4e-44
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 175 7e-44
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 2e-43
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 2e-43
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 2e-43
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 3e-43
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 4e-43
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 7e-43
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 171 1e-42
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 2e-42
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 2e-42
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 3e-42
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 170 3e-42
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 8e-42
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 167 2e-41
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 5e-41
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 5e-41
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 6e-41
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 165 8e-41
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 1e-40
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 1e-40
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 2e-40
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 6e-40
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 161 1e-39
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 1e-39
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 160 2e-39
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 3e-39
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 3e-39
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 3e-39
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 5e-39
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 7e-39
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 7e-39
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 7e-39
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 155 5e-38
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 7e-38
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 1e-37
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 2e-37
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 154 2e-37
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 2e-37
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 3e-37
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 1e-36
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 150 2e-36
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 150 3e-36
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 150 3e-36
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 3e-36
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 3e-36
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 149 4e-36
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 149 4e-36
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 5e-36
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 6e-36
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 6e-36
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 1e-35
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 143 3e-34
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 143 4e-34
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 143 4e-34
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 4e-34
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 5e-34
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 6e-34
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 8e-34
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 8e-34
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 3e-33
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 139 3e-33
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 4e-33
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 7e-33
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 1e-32
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 136 5e-32
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 9e-32
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 1e-31
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 134 2e-31
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 2e-31
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 5e-31
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 7e-31
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 8e-31
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 9e-31
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 130 2e-30
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 130 3e-30
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 4e-30
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 4e-30
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 4e-30
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 5e-30
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 129 6e-30
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 3e-29
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 4e-29
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 4e-29
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 7e-29
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 8e-29
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 8e-29
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 1e-28
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 123 3e-28
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 3e-28
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 4e-28
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 9e-28
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 9e-28
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 9e-28
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 121 1e-27
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 120 2e-27
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 6e-27
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 6e-27
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 7e-27
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 8e-27
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 9e-27
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 9e-27
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 118 1e-26
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 117 2e-26
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 117 2e-26
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 6e-26
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 115 7e-26
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 114 2e-25
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 113 4e-25
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 4e-25
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 5e-25
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 6e-25
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 7e-25
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 8e-25
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 112 8e-25
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 1e-24
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 111 1e-24
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 2e-24
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 110 3e-24
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 4e-24
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 5e-24
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 5e-24
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 6e-24
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 6e-24
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 108 8e-24
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 9e-24
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 9e-24
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 107 2e-23
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 2e-23
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 107 3e-23
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 107 3e-23
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 6e-23
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 7e-23
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 8e-23
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 8e-23
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 105 8e-23
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 5e-22
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 8e-22
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 9e-22
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 1e-21
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 1e-21
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 2e-21
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 100 2e-21
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 4e-21
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 5e-21
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 6e-21
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 99 6e-21
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 99 6e-21
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 7e-21
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 7e-21
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 9e-21
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 9e-21
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 99 9e-21
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 99 1e-20
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 2e-20
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 97 2e-20
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 97 3e-20
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 3e-20
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 5e-20
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 96 7e-20
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 8e-20
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 8e-20
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 8e-20
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 95 1e-19
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 95 2e-19
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 94 3e-19
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 4e-19
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 4e-19
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 5e-19
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 6e-19
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 6e-19
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 92 6e-19
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 7e-19
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 92 8e-19
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-18
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 91 2e-18
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 90 3e-18
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 89 9e-18
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 88 1e-17
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 88 2e-17
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 2e-17
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 86 5e-17
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 85 1e-16
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT3G42630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 84 4e-16
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 7e-16
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 81 2e-15
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 81 2e-15
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 2e-15
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 80 3e-15
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 5e-15
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 79 8e-15
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 1e-14
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 79 1e-14
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 73 4e-13
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 73 5e-13
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 68 1e-11
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 66 8e-11
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 66 8e-11
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 66 8e-11
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 60 3e-09
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT2G48000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT5G14350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 60 5e-09
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT4G17616.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT3G46870.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G11380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 813 bits (2100), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/549 (71%), Positives = 454/549 (82%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
MKS G+APD T+NTLI+CC+ GSL++EA ++FEE+K AG D VTYNALLDVYGKS R
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
PKEAM+VL +M GF PSIVTY SLISAY RDG+L+EA+ELKNQM EK KPDV+TYTT
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
LLSGF A K E AM +FEEMR AGCKPNICTFNA IKMYG+RG F EM K+F EI C
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG 449
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
SPDIVTWNTLLAVFGQNG+DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF+QA
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
VY+RML+AGVTPDLSTYN VLAALARGG+WEQSEKVL+EME+GRCKPNE+TY SLLHAY
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY 569
Query: 305 ANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDI 364
ANGKE M++LAEE+YSG I AVLLKTLVLV SK D L EAE AF E K+RG DI
Sbjct: 570 ANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDI 629
Query: 365 TTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILRE 424
TTLN+M+S+YGR+++VAK N +L +M E GFT S+ YNSLMY+HSR+ +F KSE ILRE
Sbjct: 630 TTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILRE 689
Query: 425 ILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSM 484
IL KGI+PD+ISYN VIYAYCRN +M +A RI +EM++ VPDV+TYNTF+ +YAA+SM
Sbjct: 690 ILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSM 749
Query: 485 FGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEKGR 544
F EAIGVV+ MIK GC+P+QNTYNSIVD YCKL+ ++EA FV +L +LD H + E R
Sbjct: 750 FEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAPKGEDLR 809
Query: 545 LLERIAEKW 553
LLERI +KW
Sbjct: 810 LLERIVKKW 818
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 145/495 (29%), Positives = 240/495 (48%), Gaps = 40/495 (8%)
Query: 55 LLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKH 114
++ + GK R A + ++ GF + +YTSLISA+ G EA+ + +M E
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 115 IKPDVYTYTTLLSGF--VNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAE 172
KP + TY +L+ F + +++ V E+M++ G P+ T+N LI + E
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLV-EKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 173 MGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLIS 232
+VF+E+KA S D VT+N LL V+G++ E V EM GF P T+N+LIS
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 233 AYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKP 292
AY+R G D+A + +M E G PD+ TY +L+ R G E + + EM N CKP
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 417
Query: 293 NEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAF 352
N T+++ + Y N +F +M + +EI ++ V TL+ V + +E F
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 353 LEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRT 412
E K+ G + T N ++S Y R + + + M ++G T L YN+++ +R
Sbjct: 478 KEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARG 537
Query: 413 RNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGK----------------------- 449
+ +SE +L E+ + +P+ ++Y +++AY NGK
Sbjct: 538 GMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA-NGKEIGLMHSLAEEVYSGVIEPRAVL 596
Query: 450 -------------MTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMI 496
+ EA+R +E+K+ PD+ T N+ V+ Y M +A GV+ M
Sbjct: 597 LKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMK 656
Query: 497 KQGCKPDQNTYNSIV 511
++G P TYNS++
Sbjct: 657 ERGFTPSMATYNSLM 671
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 136/337 (40%), Gaps = 71/337 (21%)
Query: 258 DLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYAN----------- 306
D S +++ L + G + + + ++ + +Y+SL+ A+AN
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 307 -------------------------GKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSK 341
G + K+ +L E++ S I A TL+ +
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKR 291
Query: 342 FDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPG 401
EA F E K G +D T NA+L +YG+ + K+L M +GF+ S+
Sbjct: 292 GSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVT 351
Query: 402 YNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISY------------------------ 437
YNSL+ ++R ++ + ++ EKG +PD+ +Y
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411
Query: 438 -----------NIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFG 486
N I Y GK TE +I +E+ PD+VT+NT +A + N M
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 487 EAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEA 523
E GV + M + G P++ T+N+++ Y + E+A
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 115/258 (44%), Gaps = 15/258 (5%)
Query: 277 QSEKVLSEM-ENGRCKPNEVTYSSLLHAYANGKEFEKMNALA---------EEIYSGKIT 326
Q + VLSE+ E + KP E T S LL A+ G F K LA ++ Y +
Sbjct: 115 QLDSVLSELFEPFKDKP-ESTSSELL-AFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLD 172
Query: 327 THAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKI 386
V + ++ + K ++ A + F ++ G D+ + +++S + + +
Sbjct: 173 NSVVAI--IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNV 230
Query: 387 LKFMYESGFTLSLPGYNSLMYLHSRTRN-FRKSEMILREILEKGIEPDLISYNIVIYAYC 445
K M E G +L YN ++ + + + K ++ ++ GI PD +YN +I
Sbjct: 231 FKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCK 290
Query: 446 RNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQN 505
R EA ++ EMK D VTYN + Y + EA+ V+ M+ G P
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIV 350
Query: 506 TYNSIVDWYCKLHLREEA 523
TYNS++ Y + + +EA
Sbjct: 351 TYNSLISAYARDGMLDEA 368
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 431 bits (1107), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/551 (41%), Positives = 329/551 (59%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +M+S+GL D T +T++S C L EA E F E+K G P VTYNALL V+G
Sbjct: 268 VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K+ EA+ VLK+ME P VTY L++AYVR G +EA + M +K + P+
Sbjct: 328 KAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAI 387
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TYTT++ + A K++ A+++F M+ AGC PN CT+NA++ + G + EM K+ ++
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
K+ CSP+ TWNT+LA+ G G+D V+ VF+EMK GF P+R+TFNTLISAY RCGS
Sbjct: 448 KSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSE 507
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
A +Y M AG ++TYNA+L ALAR G W E V+S+M++ KP E +YS +
Sbjct: 508 VDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLM 567
Query: 301 LHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI 360
L YA G + + + I G+I +LL+TL+L N K LA +E AF FKK G
Sbjct: 568 LQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGY 627
Query: 361 PHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEM 420
D+ N+MLS++ R + + IL+ + E G + L YNSLM ++ R K+E
Sbjct: 628 KPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEE 687
Query: 421 ILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYA 480
IL+ + + ++PDL+SYN VI +CR G M EA R+L+EM + P + TYNTFV+ Y
Sbjct: 688 ILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYT 747
Query: 481 ANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEE 540
A MF E V++CM K C+P++ T+ +VD YC+ EA +FV + + D ++
Sbjct: 748 AMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPCFDDQ 807
Query: 541 EKGRLLERIAE 551
RL R+ E
Sbjct: 808 SIQRLALRVRE 818
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 139/525 (26%), Positives = 252/525 (48%), Gaps = 71/525 (13%)
Query: 28 SLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTY 87
S Y A +L ++I L D+ Y +L Y ++ + ++A+++ ++M+ G P++VTY
Sbjct: 189 SQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTY 248
Query: 88 TSLISAYVRDGL-LEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMR 146
++ + + G + L + ++M K +K D +T +T+LS A F E++
Sbjct: 249 NVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELK 308
Query: 147 TAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDS 206
+ G +P T+NAL++++G G++ E V KE++ C D VT+N L+A + + G
Sbjct: 309 SCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSK 368
Query: 207 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVL 266
E +GV + M + G +P T+ T+I AY + G D+A ++ M EAG P+ TYNAVL
Sbjct: 369 EAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVL 428
Query: 267 AALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKIT 326
+ L + + K+L +M++ C PN T++++L A K +K
Sbjct: 429 SLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDK-------------- 473
Query: 327 THAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKI 386
VN F E K G D T N ++S YGR +K+
Sbjct: 474 ----------FVN----------RVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKM 513
Query: 387 LKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCR 446
M +GF + YN+L+ +R ++R E ++ ++ KG +P SY++++ Y +
Sbjct: 514 YGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAK 573
Query: 447 NGKMTEAKRILNEMKD----PAPV-------------------------------PDVVT 471
G +RI N +K+ P+ + PD+V
Sbjct: 574 GGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVI 633
Query: 472 YNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
+N+ ++ + N+M+ +A G+++ + + G PD TYNS++D Y +
Sbjct: 634 FNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVR 678
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 183/433 (42%), Gaps = 40/433 (9%)
Query: 124 TLLSGFVNAKKDELAMRVFEEM----RTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
+L+ G ++ E A+ +FE + + K + +++ G ++ K+ +
Sbjct: 141 SLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDK 200
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG- 238
I + D+ + T+L + + G + +F+ MK G P T+N ++ + + G
Sbjct: 201 IPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGR 260
Query: 239 SFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYS 298
S+ + V M G+ D T + VL+A AR GL ++++ +E+++ +P VTY+
Sbjct: 261 SWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYN 320
Query: 299 SLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKR 358
+LL + + + ++ +E+ +V LV + F EA K+
Sbjct: 321 ALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKK 380
Query: 359 GI-PHDIT----------------------------------TLNAMLSLYGRKKLVAKT 383
G+ P+ IT T NA+LSL G+K +
Sbjct: 381 GVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEM 440
Query: 384 NKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYA 443
K+L M +G + + +N+++ L + + RE+ G EPD ++N +I A
Sbjct: 441 IKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISA 500
Query: 444 YCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPD 503
Y R G +A ++ EM V TYN + A + V+ M +G KP
Sbjct: 501 YGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPT 560
Query: 504 QNTYNSIVDWYCK 516
+ +Y+ ++ Y K
Sbjct: 561 ETSYSLMLQCYAK 573
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 146/538 (27%), Positives = 254/538 (47%), Gaps = 39/538 (7%)
Query: 5 MKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
++S+G + N LI S R G + E A +++EI +G+ ++ T N +++ K
Sbjct: 191 LRSKGFTVSIDACNALIGSLVRIGWV-ELAWGVYQEISRSGVGINVYTLNIMVNALCKDG 249
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ ++ L Q++ +G P IVTY +LISAY GL+EEA EL N M K P VYTY
Sbjct: 250 KMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYN 309
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
T+++G K E A VF EM +G P+ T+ +L+ +G E KVF ++++
Sbjct: 310 TVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR 369
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
PD+V +++++++F ++G + F +K AG +P+ + LI Y R G A
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVA 429
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEME---------------NG 288
+ ML+ G D+ TYN +L L + + +++K+ +EM +G
Sbjct: 430 MNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDG 489
Query: 289 RCKPNE--------------------VTYSSLLHAYANGKEFEKMNALAEEIYSGKITTH 328
CK VTY++LL + + + + ++ S +I
Sbjct: 490 HCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPT 549
Query: 329 AVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILK 388
+ LV LAEA + E + I + N+M+ Y R + L+
Sbjct: 550 PISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLE 609
Query: 389 FMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEK--GIEPDLISYNIVIYAYCR 446
M GF YN+L+Y R N K+ +++++ E+ G+ PD+ +YN +++ +CR
Sbjct: 610 KMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCR 669
Query: 447 NGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQ 504
+M EA+ +L +M + PD TY + + + EA + M+++G PD
Sbjct: 670 QNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 116/499 (23%), Positives = 225/499 (45%), Gaps = 8/499 (1%)
Query: 51 TYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQM 110
++ L+ Y ++R+ +EA E + S+GF SI +LI + VR G +E A + ++
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 111 VEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMF 170
+ +VYT +++ K E +++ G P+I T+N LI Y +G+
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 171 AEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTL 230
E ++ + SP + T+NT++ ++G VF EM R+G P+ T+ +L
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 231 ISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRC 290
+ + G + V+ M V PDL ++++++ R G +++ + ++
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406
Query: 291 KPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEH 350
P+ V Y+ L+ Y L E+ V T++ K L EA+
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 466
Query: 351 AFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHS 410
F E +R + D TL ++ + + + ++ + M E L + YN+L+
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG 526
Query: 411 RTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVV 470
+ + ++ I +++ K I P ISY+I++ A C G + EA R+ +EM P V+
Sbjct: 527 KVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVM 586
Query: 471 TYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
N+ + Y + + ++ MI +G PD +YN+++ + + +A+ V +
Sbjct: 587 ICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKM 646
Query: 531 SSLDLHVSEEEKGRLLERI 549
EEE+G L+ +
Sbjct: 647 --------EEEQGGLVPDV 657
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 186/438 (42%), Gaps = 53/438 (12%)
Query: 80 FPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAM 139
F + ++ +++I VR G L +A +M+ + + +L S F N
Sbjct: 109 FKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSN-------- 160
Query: 140 RVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVF 199
C N F+ LI+ Y E + F +++ + I N L+
Sbjct: 161 ----------CGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSL 210
Query: 200 GQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDL 259
+ G GV++E+ R+G T N +++A + G ++ ++ E GV PD+
Sbjct: 211 VRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDI 270
Query: 260 STYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEE 319
TYN +++A + GL E++ ++++ M P TY+++++ ++E+ + E
Sbjct: 271 VTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAE 330
Query: 320 IYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKL 379
+ ++ + ++L++ K + E E F + + R + D+ ++M+SL+
Sbjct: 331 MLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLF----- 385
Query: 380 VAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNI 439
+R+ N K+ M + E G+ PD + Y I
Sbjct: 386 ------------------------------TRSGNLDKALMYFNSVKEAGLIPDNVIYTI 415
Query: 440 VIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQG 499
+I YCR G ++ A + NEM DVVTYNT + M GEA + M ++
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475
Query: 500 CKPDQNTYNSIVDWYCKL 517
PD T ++D +CKL
Sbjct: 476 LFPDSYTLTILIDGHCKL 493
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 149/293 (50%), Gaps = 2/293 (0%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M QG A D+ T+NT++ + EA +LF E+ L PD T L+D + K
Sbjct: 435 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLG 494
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ AME+ ++M+ + +VTY +L+ + + G ++ A E+ MV K I P +Y+
Sbjct: 495 NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYS 554
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
L++ + A RV++EM + KP + N++IK Y G ++ +++ +
Sbjct: 555 ILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE 614
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMK--RAGFVPERETFNTLISAYSRCGSFD 241
PD +++NTL+ F + S+ G+ K+M+ + G VP+ T+N+++ + R
Sbjct: 615 GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674
Query: 242 QARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNE 294
+A V ++M+E GV PD STY ++ ++ ++ EM P++
Sbjct: 675 EAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/509 (25%), Positives = 246/509 (48%), Gaps = 2/509 (0%)
Query: 5 MKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M+ G+ D+ T +I+C CR L L KL G PD +T++ L++ +
Sbjct: 96 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKL-GYEPDTITFSTLVNGFCLEG 154
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
R EA+ ++ +M P +VT ++LI+ G + EAL L ++MVE +PD TY
Sbjct: 155 RVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYG 214
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
+L+ + LA+ +F +M K ++ ++ +I G F + +F E++
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
D+VT+++L+ +G + + + +EM +P+ TF+ LI + + G +A
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
+ +Y M+ G+ PD TYN+++ + ++ ++ M + C+P+ VTYS L+++
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
Y K + L EI S + + + TLVL + L A+ F E RG+P
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 454
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILR 423
+ T +L + K +I + M +S TL + YN +++ + +
Sbjct: 455 VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFC 514
Query: 424 EILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANS 483
+ +KG++PD+++YN++I C+ G ++EA + +MK+ PD TYN + + S
Sbjct: 515 SLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGS 574
Query: 484 MFGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
++ +++ M G D +T ++D
Sbjct: 575 GLISSVELIEEMKVCGFSADSSTIKMVID 603
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 214/441 (48%), Gaps = 5/441 (1%)
Query: 2 LMDMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+++MK + PDL T +TLI+ C G + EAL L + + G +PD VTY +L+
Sbjct: 166 MVEMKQR---PDLVTVSTLINGLCLKGRV-SEALVLIDRMVEYGFQPDEVTYGPVLNRLC 221
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
KS A+++ ++ME R S+V Y+ +I + +DG ++AL L N+M K IK DV
Sbjct: 222 KSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVV 281
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY++L+ G N K + ++ EM P++ TF+ALI ++ G E +++ E+
Sbjct: 282 TYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+PD +T+N+L+ F + E + +F M G P+ T++ LI++Y +
Sbjct: 342 ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV 401
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
D +++ + G+ P+ TYN ++ + G ++++ EM + P+ VTY L
Sbjct: 402 DDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGIL 461
Query: 301 LHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI 360
L + E K + E++ ++T + ++ + +A F +G+
Sbjct: 462 LDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV 521
Query: 361 PHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEM 420
D+ T N M+ +K +++ + + + M E G T YN L+ H S
Sbjct: 522 KPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVE 581
Query: 421 ILREILEKGIEPDLISYNIVI 441
++ E+ G D + +VI
Sbjct: 582 LIEEMKVCGFSADSSTIKMVI 602
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 116/480 (24%), Positives = 217/480 (45%), Gaps = 7/480 (1%)
Query: 53 NALLDVYGKSRRPKEAMEVLKQM-ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMV 111
N ++D+ + +A+++ + M +SR P I + L SA R + L M
Sbjct: 44 NGIVDI-----KVNDAIDLFESMIQSRPLPTPI-DFNRLCSAVARTKQYDLVLGFCKGME 97
Query: 112 EKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFA 171
I+ D+YT T +++ + KK A V G +P+ TF+ L+ + G +
Sbjct: 98 LNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVS 157
Query: 172 EMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLI 231
E + + + PD+VT +TL+ G SE + M GF P+ T+ ++
Sbjct: 158 EAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVL 217
Query: 232 SAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCK 291
+ + G+ A ++++M E + + Y+ V+ +L + G ++ + + +EME K
Sbjct: 218 NRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIK 277
Query: 292 PNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHA 351
+ VTYSSL+ N +++ + E+ I V L+ V K L EA+
Sbjct: 278 ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337
Query: 352 FLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSR 411
+ E RGI D T N+++ + ++ + + N++ M G + Y+ L+ + +
Sbjct: 338 YNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 397
Query: 412 TRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVT 471
+ + REI KG+ P+ I+YN ++ +C++GK+ AK + EM P VVT
Sbjct: 398 AKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVT 457
Query: 472 YNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLS 531
Y + N +A+ + + M K YN I+ C ++A++ +LS
Sbjct: 458 YGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLS 517
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 108/485 (22%), Positives = 222/485 (45%)
Query: 32 EALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLI 91
+A++LFE + + P + +N L ++++ + K ME G + T T +I
Sbjct: 53 DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 112
Query: 92 SAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCK 151
+ Y R L A + + + +PD T++TL++GF + A+ + + M +
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 152 PNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGV 211
P++ T + LI +G +E + + PD VT+ +L ++G + +
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 212 FKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALAR 271
F++M+ ++ +I + + GSFD A +++ M G+ D+ TY++++ L
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 272 GGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVL 331
G W+ K+L EM P+ VT+S+L+ + + + L E+ + I +
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 352
Query: 332 LKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMY 391
+L+ K + L EA F +G DI T + +++ Y + K V ++ + +
Sbjct: 353 YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS 412
Query: 392 ESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMT 451
G + YN+L+ ++ ++ + +E++ +G+ P +++Y I++ C NG++
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472
Query: 452 EAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
+A I +M+ + YN + S +A + + +G KPD TYN ++
Sbjct: 473 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Query: 512 DWYCK 516
CK
Sbjct: 533 GGLCK 537
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 151/287 (52%), Gaps = 2/287 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
ML +M + + PD+ TF+ LI + G L E A EL+ E+ G+ PD +TYN+L+D +
Sbjct: 302 MLREMIGRNIIPDVVTFSALIDVFVKEGKLLE-AKELYNEMITRGIAPDTITYNSLIDGF 360
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
K EA ++ M S+G P IVTY+ LI++Y + +++ + L ++ K + P+
Sbjct: 361 CKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 420
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TY TL+ GF + K A +F+EM + G P++ T+ L+ D G + ++F++
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 480
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
++ + + I +N ++ + +F + G P+ T+N +I + GS
Sbjct: 481 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEME 286
+A ++++M E G TPD TYN ++ A G S +++ EM+
Sbjct: 541 LSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMK 587
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 141/268 (52%), Gaps = 2/268 (0%)
Query: 4 DMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
+M ++G+APD T+N+LI C+ L+ EA ++F+ + G PD+VTY+ L++ Y K+
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCKENCLH-EANQMFDLMVSKGCEPDIVTYSILINSYCKA 398
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
+R + M + +++ S+G P+ +TY +L+ + + G L A EL +MV + + P V TY
Sbjct: 399 KRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 458
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
LL G + + A+ +FE+M+ + I +N +I + + +F +
Sbjct: 459 GILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 518
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
PD+VT+N ++ + G SE +F++MK G P+ T+N LI A+
Sbjct: 519 KGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLIS 578
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALA 270
+ + + M G + D ST V+ L+
Sbjct: 579 SVELIEEMKVCGFSADSSTIKMVIDMLS 606
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/464 (21%), Positives = 187/464 (40%), Gaps = 88/464 (18%)
Query: 83 SIVTYTSLISA------YVRDGLLE----EALELKNQMVEKHIKPDVYTYTTLLSGFVNA 132
S++ Y+S+ A +R+G+++ +A++L M++ P + L S
Sbjct: 24 SLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVART 83
Query: 133 KKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRG----MFAEMGKVFKEIKACQCSPD 188
K+ +L + + M G + ++ T +I Y + F+ +G+ +K PD
Sbjct: 84 KQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWK----LGYEPD 139
Query: 189 IVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYK 248
+T++TL+ F G SE + M P+ T +TLI+ G +A +
Sbjct: 140 TITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLID 199
Query: 249 RMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGK 308
RM+E G PD TY VL L + G + + +ME K + V YS ++ +
Sbjct: 200 RMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDG 259
Query: 309 EFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLN 368
F+ +A F E + +GI D+ T
Sbjct: 260 SFD-----------------------------------DALSLFNEMEMKGIKADVVT-- 282
Query: 369 AMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEK 428
Y+SL+ + +LRE++ +
Sbjct: 283 ---------------------------------YSSLIGGLCNDGKWDDGAKMLREMIGR 309
Query: 429 GIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEA 488
I PD+++++ +I + + GK+ EAK + NEM PD +TYN+ + + + EA
Sbjct: 310 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEA 369
Query: 489 IGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSS 532
+ M+ +GC+PD TY+ +++ YCK ++ +SS
Sbjct: 370 NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 115/238 (48%), Gaps = 39/238 (16%)
Query: 5 MKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M S+G PD+ T++ LI S C+A + ++ + LF EI GL P+ +TYN L+ + +S
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRV-DDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 434
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQM------------- 110
+ A E+ ++M SRG PPS+VTY L+ +G L +ALE+ +M
Sbjct: 435 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYN 494
Query: 111 ----------------------VEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTA 148
+K +KPDV TY ++ G A +F +M+
Sbjct: 495 IIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED 554
Query: 149 GCKPNICTFNALIKMY-GDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLD 205
GC P+ T+N LI+ + G G+ + + ++ +E+K C S D T ++ + LD
Sbjct: 555 GCTPDDFTYNILIRAHLGGSGLISSV-ELIEEMKVCGFSADSSTIKMVIDMLSDRRLD 611
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 244/485 (50%), Gaps = 1/485 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ +M+ +G+ PD+ T+NTL+S C L +EA +F + G+ PD+ TY+ L++ +G
Sbjct: 234 LFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFG 293
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K RR ++ ++L +M S G P I +Y L+ AY + G ++EA+ + +QM P+
Sbjct: 294 KLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNAN 353
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY+ LL+ F + + + ++F EM+++ P+ T+N LI+++G+ G F E+ +F ++
Sbjct: 354 TYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDM 413
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
PD+ T+ ++ G+ GL + + + M VP + + +I A+ + +
Sbjct: 414 VEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALY 473
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
++A + M E G P + T++++L + ARGGL ++SE +LS + + N T+++
Sbjct: 474 EEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQ 533
Query: 301 LHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI 360
+ AY G +FE+ ++ + L+ ++ V S + E F E K I
Sbjct: 534 IEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDI 593
Query: 361 PHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYL-HSRTRNFRKSE 419
I ML++YG+ + N++L+ M + + ++ + N++ E
Sbjct: 594 LPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVE 653
Query: 420 MILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATY 479
+L ++ +G + YN ++ A G+ A R+LNE P++ N V +
Sbjct: 654 YVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPELFRKNKLVWSV 713
Query: 480 AANSM 484
+ M
Sbjct: 714 DVHRM 718
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/495 (24%), Positives = 233/495 (47%), Gaps = 37/495 (7%)
Query: 30 YEEALELFEEI-KLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYT 88
++ +L LF+ + + +P+ Y ++ + G+ + +EV +M S+G S+ +YT
Sbjct: 121 WQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYT 180
Query: 89 SLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKD-ELAMRVFEEMRT 147
+LI+AY R+G E +LEL ++M + I P + TY T+++ D E + +F EMR
Sbjct: 181 ALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRH 240
Query: 148 AGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSE 207
G +P+I T+N L+ RG+ E VF+ + PD+ T++ L+ FG+ +
Sbjct: 241 EGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEK 300
Query: 208 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLA 267
V + EM G +P+ ++N L+ AY++ GS +A V+ +M AG TP+ +TY+ +L
Sbjct: 301 VCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLN 360
Query: 268 ALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITT 327
+ G ++ ++ EM++ P+ TY+ L+ + G F+++ L
Sbjct: 361 LFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTL----------- 409
Query: 328 HAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKIL 387
F + + I D+ T ++ G+ L KIL
Sbjct: 410 ------------------------FHDMVEENIEPDMETYEGIIFACGKGGLHEDARKIL 445
Query: 388 KFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRN 447
++M + S Y ++ + + ++ + + E G P + +++ ++Y++ R
Sbjct: 446 QYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARG 505
Query: 448 GKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTY 507
G + E++ IL+ + D + T+N + Y F EA+ M K C PD+ T
Sbjct: 506 GLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTL 565
Query: 508 NSIVDWYCKLHLREE 522
+++ Y L +E
Sbjct: 566 EAVLSVYSFARLVDE 580
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 121/478 (25%), Positives = 219/478 (45%), Gaps = 36/478 (7%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M SQG++ + ++ LI+ YE +LEL + +K + P ++TYN +++ +
Sbjct: 166 EMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGG 225
Query: 64 RPKEA-MEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
E + + +M G P IVTY +L+SA GL +EA + M + I PD+ TY
Sbjct: 226 LDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTY 285
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
+ L+ F ++ E + EM + G P+I ++N L++ Y G E VF +++A
Sbjct: 286 SHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQA 345
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
C+P+ T++ LL +FGQ+G +V +F EMK + P+ T+N LI + G F +
Sbjct: 346 AGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKE 405
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
++ M+E + PD+ TY ++ A +GGL E + K+L M P+ Y+ ++
Sbjct: 406 VVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIE 465
Query: 303 AYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPH 362
A+ +E EA AF + G
Sbjct: 466 AFGQAALYE-----------------------------------EALVAFNTMHEVGSNP 490
Query: 363 DITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMIL 422
I T +++L + R LV ++ IL + +SG + +N+ + + + F ++
Sbjct: 491 SIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTY 550
Query: 423 REILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYA 480
++ + +PD + V+ Y + E + EMK +P ++ Y +A Y
Sbjct: 551 VDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYG 608
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 179/387 (46%), Gaps = 37/387 (9%)
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEI-KACQCSPDIVTWNTLLAVFGQNGLDSEVS 209
K ++ F + K + RG + ++FK + + C P+ + ++++ G+ GL +
Sbjct: 102 KLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCL 161
Query: 210 GVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAAL 269
VF EM G ++ LI+AY R G ++ + + RM ++P + TYN V+ A
Sbjct: 162 EVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINAC 221
Query: 270 ARGGL-WEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTH 328
ARGGL WE + +EM + +P+ VTY++LL A A + L +E
Sbjct: 222 ARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA-------IRGLGDE--------- 265
Query: 329 AVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILK 388
AE F GI D+TT + ++ +G+ + + K +L
Sbjct: 266 -------------------AEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLG 306
Query: 389 FMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNG 448
M G + YN L+ ++++ + +++ + ++ G P+ +Y++++ + ++G
Sbjct: 307 EMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSG 366
Query: 449 KMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYN 508
+ + +++ EMK PD TYN + + F E + + M+++ +PD TY
Sbjct: 367 RYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYE 426
Query: 509 SIVDWYCKLHLREEAYNFVHNLSSLDL 535
I+ K L E+A + +++ D+
Sbjct: 427 GIIFACGKGGLHEDARKILQYMTANDI 453
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 205 bits (521), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 127/529 (24%), Positives = 250/529 (47%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
DM P + FN L+S + +E + L E+++ G+ D+ TY+ ++ + +
Sbjct: 73 DMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRS 132
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ A+ VL +M G+ P IVT +SL++ Y + +A+ L +QMVE KPD +T+T
Sbjct: 133 QLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFT 192
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
TL+ G K A+ + ++M GC+P++ T+ ++ RG + K+++
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKG 252
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
+ D+V +NT++ + + +F EM G P+ T+++LIS G + A
Sbjct: 253 KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA 312
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
+ M+E + P++ T++A++ A + G ++EK+ EM P+ TYSSL++
Sbjct: 313 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 372
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
+ ++ + E + S + V TL+ K + E F E +RG+ +
Sbjct: 373 FCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGN 432
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILR 423
T ++ + + + + K M G ++ YN L+ + K+ ++
Sbjct: 433 TVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFE 492
Query: 424 EILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANS 483
+ +EPD+ +YNI+I C+ GK+ + + + P+V+ YNT ++ +
Sbjct: 493 YLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKG 552
Query: 484 MFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSS 532
EA +++ M + G P+ TYN+++ + RE + + + S
Sbjct: 553 SKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRS 601
Score = 178 bits (452), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 107/476 (22%), Positives = 223/476 (46%), Gaps = 35/476 (7%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L M G PD+ T ++L++ +A+ L +++ G +PD T+ L+
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ EA+ ++ QM RG P +VTY ++++ + G ++ AL L +M + I+ DV
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 259
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
Y T++ G K + A+ +F EM G +P++ T+++LI + G +++ ++ ++
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ +P++VT++ L+ F + G E ++ EM + P+ T+++LI+ +
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
D+A+ +++ M+ P++ TY+ ++ + E+ ++ EM N VTY++L
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439
Query: 301 LHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI 360
+H + ++ + A+ F + G+
Sbjct: 440 IHGFFQARDCD-----------------------------------NAQMVFKQMVSVGV 464
Query: 361 PHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEM 420
+I T N +L + +AK + +++ S + YN ++ +
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWE 524
Query: 421 ILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFV 476
+ + KG+ P++I+YN +I +CR G EA +L +MK+ P+P+ TYNT +
Sbjct: 525 LFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 205/437 (46%), Gaps = 37/437 (8%)
Query: 5 MKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M +G PDL T+ T+++ C+ G + + AL L ++++ + D+V YN ++D K +
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDI-DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYK 272
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+A+ + +M+++G P + TY+SLIS G +A L + M+E+ I P+V T++
Sbjct: 273 HMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFS 332
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
L+ FV K A ++++EM P+I T+++LI + E +F+ + +
Sbjct: 333 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 392
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
C P++VT++TL+ F + E +F+EM + G V T+ TLI + + D A
Sbjct: 393 DCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 452
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
+ V+K+M+ GV P++ TYN +L L + G ++ V ++ +P+ TY+ ++
Sbjct: 453 QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 512
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
+ E + F +G+ +
Sbjct: 513 MCKAGKVE-----------------------------------DGWELFCNLSLKGVSPN 537
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILR 423
+ N M+S + RK + + +LK M E G + YN+L+ R + S +++
Sbjct: 538 VIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIK 597
Query: 424 EILEKGIEPDLISYNIV 440
E+ G D + +V
Sbjct: 598 EMRSCGFAGDASTIGLV 614
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 184/357 (51%), Gaps = 35/357 (9%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L M+ + D+ +NT+I ++AL LF E+ G+RPD+ TY++L+
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
R +A +L M R P++VT+++LI A+V++G L EA +L ++M+++ I PD++
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 364
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYG-----DRGM--FAEM 173
TY++L++GF + + A +FE M + C PN+ T++ LIK + + GM F EM
Sbjct: 365 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424
Query: 174 GK----------------------------VFKEIKACQCSPDIVTWNTLLAVFGQNGLD 205
+ VFK++ + P+I+T+N LL +NG
Sbjct: 425 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 484
Query: 206 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAV 265
++ VF+ ++R+ P+ T+N +I + G + ++ + GV+P++ YN +
Sbjct: 485 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTM 544
Query: 266 LAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYS 322
++ R G E+++ +L +M+ PN TY++L+ A + E L +E+ S
Sbjct: 545 ISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRS 601
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/517 (21%), Positives = 217/517 (41%), Gaps = 71/517 (13%)
Query: 78 RGFPPSIVTYTSLISAYVRDGL-LEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDE 136
R F + Y ++ + D + +++A++L MV+ P + + LLS K E
Sbjct: 41 RSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFE 100
Query: 137 LAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLL 196
L + + E+M+T G ++ T++ I + R + V ++ PDIVT ++LL
Sbjct: 101 LVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLL 160
Query: 197 AVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVT 256
+ + S+ + +M G+ P+ TF TLI +A A+ +M++ G
Sbjct: 161 NGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQ 220
Query: 257 PDLSTYNAVLAALARGG-------LWEQSEK----------------------------V 281
PDL TY V+ L + G L ++ EK +
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNL 280
Query: 282 LSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSK 341
+EM+N +P+ TYSSL+ N + + L ++ KI + V L+ K
Sbjct: 281 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 340
Query: 342 FDFLAEAEHAFLEFKKRGIPHDI-----------------------------------TT 366
L EAE + E KR I DI T
Sbjct: 341 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 400
Query: 367 LNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREIL 426
+ ++ + + K V + ++ + M + G + Y +L++ + R+ ++M+ ++++
Sbjct: 401 YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460
Query: 427 EKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFG 486
G+ P++++YNI++ C+NGK+ +A + ++ PD+ TYN +
Sbjct: 461 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVE 520
Query: 487 EAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEA 523
+ + + +G P+ YN+++ +C+ +EEA
Sbjct: 521 DGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEA 557
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 140/271 (51%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M + + PD+ T+++LI+ +EA +FE + P++VTY+ L+ + K++
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
R +E ME+ ++M RG + VTYT+LI + + + A + QMV + P++ TY
Sbjct: 413 RVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 472
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
LL G K AM VFE ++ + +P+I T+N +I+ G + ++F +
Sbjct: 473 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK 532
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
SP+++ +NT+++ F + G E + K+MK G +P T+NTLI A R G + +
Sbjct: 533 GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREAS 592
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGL 274
+ K M G D ST V L G L
Sbjct: 593 AELIKEMRSCGFAGDASTIGLVTNMLHDGRL 623
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 6/208 (2%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ +M +GL + T+ TLI + A +F+++ G+ P+++TYN LLD
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K+ + +AM V + ++ P I TY +I + G +E+ EL + K + P+V
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI 539
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMY---GDRGMFAEMGKVF 177
Y T++SGF E A + ++M+ G PN T+N LI+ GDR AE+
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAEL---I 596
Query: 178 KEIKACQCSPDIVTWNTLLAVFGQNGLD 205
KE+++C + D T + + LD
Sbjct: 597 KEMRSCGFAGDASTIGLVTNMLHDGRLD 624
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 145/529 (27%), Positives = 246/529 (46%), Gaps = 14/529 (2%)
Query: 5 MKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M +GL P T++ LI C+ L E+A L E+ G+ D TY+ L+D K R
Sbjct: 268 MICKGLVPLKYTYDVLIDGLCKIKRL-EDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGR 326
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
A ++ +M S G Y I ++G++E+A L + M+ + P Y
Sbjct: 327 NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYA 386
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
+L+ G+ K + EM+ + T+ ++K G + KE+ A
Sbjct: 387 SLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS 446
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
C P++V + TL+ F QN + V KEMK G P+ +N+LI S+ D+A
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
R+ M+E G+ P+ TY A ++ + ++K + EM PN+V + L++
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566
Query: 304 YA-NGKEFEKMNA---LAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRG 359
Y GK E +A + ++ G T+ VL+ L N K D +AE F E + +G
Sbjct: 567 YCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL-FKNDKVD---DAEEIFREMRGKG 622
Query: 360 IPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSE 419
I D+ + +++ + + + K + I M E G T ++ YN L+ R+ K++
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 420 MILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATY 479
+L E+ KG+ P+ ++Y +I YC++G + EA R+ +EMK VPD Y T V
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 480 AANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDW---YCKLHLREEAYN 525
+ AI + K+GC +N++++W + K L+ E N
Sbjct: 743 CRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLN 790
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 135/536 (25%), Positives = 250/536 (46%), Gaps = 44/536 (8%)
Query: 1 MLMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L++MK + + T+ T++ C +G L + A + +E+ +G RP++V Y L+ +
Sbjct: 404 LLVEMKKRNIVISPYTYGTVVKGMCSSGDL-DGAYNIVKEMIASGCRPNVVIYTTLIKTF 462
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
++ R +AM VLK+M+ +G P I Y SLI + ++EA +MVE +KP+
Sbjct: 463 LQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNA 522
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
+TY +SG++ A + A + +EMR G PN LI Y +G E ++
Sbjct: 523 FTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRS 582
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+ D T+ L+ +N + +F+EM+ G P+ ++ LI+ +S+ G+
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
+A +++ M+E G+TP++ YN +L R G E+++++L EM PN VTY +
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 300 LLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEF--KK 357
++ Y + + L +E+ + + + TLV + L + E A F K
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR---LNDVERAITIFGTNK 759
Query: 358 RGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRK 417
+G NA++ N + KF G L K
Sbjct: 760 KGCASSTAPFNALI------------NWVFKF-----------GKTEL-----------K 785
Query: 418 SEMILREI---LEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNT 474
+E++ R + ++ +P+ ++YNI+I C+ G + AK + ++M++ +P V+TY +
Sbjct: 786 TEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTS 845
Query: 475 FVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
+ Y E V I G +PD Y+ I++ + K + +A V +
Sbjct: 846 LLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 124/551 (22%), Positives = 225/551 (40%), Gaps = 25/551 (4%)
Query: 9 GLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEA 68
G + D F L A EEA+ +F L P + LLD + R
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205
Query: 69 MEVLKQMESRGFPPSIVTYTSLISAYVRDGLLE---------------------EALELK 107
+V K M R + TY LI A+ R G ++ AL+LK
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265
Query: 108 NQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIK-MYGD 166
M+ K + P YTY L+ G K+ E A + EM + G + T++ LI +
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325
Query: 167 RGMFAEMGKVFKEIK-ACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERE 225
R A G V + + P ++ + V + G+ + +F M +G +P+ +
Sbjct: 326 RNADAAKGLVHEMVSHGINIKP--YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQ 383
Query: 226 TFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM 285
+ +LI Y R + Q + M + + TY V+ + G + + ++ EM
Sbjct: 384 AYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEM 443
Query: 286 ENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFL 345
C+PN V Y++L+ + F + +E+ I +L++ SK +
Sbjct: 444 IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRM 503
Query: 346 AEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSL 405
EA +E + G+ + T A +S Y A +K +K M E G + L
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL 563
Query: 406 MYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAP 465
+ + + ++ R ++++GI D +Y +++ +N K+ +A+ I EM+
Sbjct: 564 INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Query: 466 VPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYN 525
PDV +Y + ++ +A + M+++G P+ YN ++ +C+ E+A
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 526 FVHNLSSLDLH 536
+ +S LH
Sbjct: 684 LLDEMSVKGLH 694
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 158/343 (46%), Gaps = 45/343 (13%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M+ +G+APD+ ++ LI+ ++A +F+E+ GL P+++ YN LL + +S
Sbjct: 617 EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG 676
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
++A E+L +M +G P+ VTY ++I Y + G L EA L ++M K + PD + YT
Sbjct: 677 EIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYT 736
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGC--------------------------------- 150
TL+ G E A+ +F + GC
Sbjct: 737 TLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDG 795
Query: 151 ------KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGL 204
KPN T+N +I G ++F +++ P ++T+ +LL + + G
Sbjct: 796 SFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGR 855
Query: 205 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPD-----L 259
+E+ VF E AG P+ ++ +I+A+ + G +A + +M D +
Sbjct: 856 RAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSI 915
Query: 260 STYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
ST A+L+ A+ G E +EKV+ M + P+ T L++
Sbjct: 916 STCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/510 (24%), Positives = 242/510 (47%), Gaps = 4/510 (0%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV 71
P + F+ L+S ++ + E++++ G+ ++ TYN +++ + + A+ +
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 72 LKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVN 131
L +M G+ PSIVT SL++ + + EA+ L +QMVE +PD T+TTL+ G
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 182
Query: 132 AKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVT 191
K A+ + E M GC+P++ T+ A+I RG + +++ + D+V
Sbjct: 183 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242
Query: 192 WNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRML 251
++T++ + + +F EM G P+ T+++LIS G + A + ML
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 252 EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE 311
E + P++ T+N+++ A A+ G ++EK+ EM PN VTY+SL++ + +
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 312 KMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAML 371
+ + + S V TL+ K + + F + +RG+ + T ++
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Query: 372 SLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIE 431
+ + + K M G ++ YN+L+ + K+ ++ + + +E
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME 482
Query: 432 PDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGV 491
PD+ +YNI+ C+ GK+ + + + PDV+ YNT ++ + + EA +
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Query: 492 VQCMIKQGCKPDQNTYNSIVDWYCKLHLRE 521
M + G PD TYN+++ + HLR+
Sbjct: 543 FIKMKEDGPLPDSGTYNTLI----RAHLRD 568
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 118/509 (23%), Positives = 243/509 (47%), Gaps = 2/509 (0%)
Query: 5 MKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M+ G++ +L T+N +I+C CR L AL + ++ G P +VT N+LL+ +
Sbjct: 91 MEILGVSHNLYTYNIMINCLCRRSQL-SFALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 149
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
R EA+ ++ QM G+ P VT+T+L+ + EA+ L +MV K +PD+ TY
Sbjct: 150 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 209
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
+++G + +LA+ + +M + ++ ++ +I + +F E+
Sbjct: 210 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK 269
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
PD+ T+++L++ G S+ S + +M P TFN+LI A+++ G +A
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
++ M++ + P++ TYN+++ ++++++ + M + C P+ VTY++L++
Sbjct: 330 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
+ K+ L ++ + + V TL+ + A+ F + G+ +
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILR 423
I T N +L + + K + +++ +S + YN + + +
Sbjct: 450 IMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFC 509
Query: 424 EILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANS 483
+ KG++PD+I+YN +I +C+ G EA + +MK+ P+PD TYNT + + +
Sbjct: 510 SLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569
Query: 484 MFGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
+ +++ M D +TY + D
Sbjct: 570 DKAASAELIKEMRSCRFAGDASTYGLVTD 598
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 203/443 (45%), Gaps = 4/443 (0%)
Query: 78 RGFPPSIVTYTSLISAYVRDGLL----EEALELKNQMVEKHIKPDVYTYTTLLSGFVNAK 133
RG S ++Y R+ LL +EA++L +MV+ P + ++ LLS K
Sbjct: 20 RGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMK 79
Query: 134 KDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWN 193
K +L + E+M G N+ T+N +I R + + ++ P IVT N
Sbjct: 80 KFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLN 139
Query: 194 TLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEA 253
+LL F SE + +M G+ P+ TF TL+ + +A A+ +RM+
Sbjct: 140 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 199
Query: 254 GVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKM 313
G PDL TY AV+ L + G + + +L++ME G+ + + V YS+++ + + +
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 314 NALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSL 373
L E+ + I +L+ + ++A + +R I ++ T N+++
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319
Query: 374 YGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPD 433
+ ++ + + K+ M + ++ YNSL+ +++ I ++ K PD
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379
Query: 434 LISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQ 493
+++YN +I +C+ K+ + + +M V + VTY T + + S A V +
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK 439
Query: 494 CMIKQGCKPDQNTYNSIVDWYCK 516
M+ G P+ TYN+++D CK
Sbjct: 440 QMVSDGVHPNIMTYNTLLDGLCK 462
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/501 (21%), Positives = 224/501 (44%), Gaps = 35/501 (6%)
Query: 31 EEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSL 90
+EA++LF E+ + P +V ++ LL K ++ + ++ME G ++ TY +
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 91 ISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
I+ R L AL + +M++ P + T +LL+GF + + A+ + ++M G
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
+P+ TF L+ +E + + + C PD+VT+ ++ + G
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
+ +M++ + ++T+I + + D A ++ M G+ PD+ TY+++++ L
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAV 330
G W + ++LS+M + PN VT++SL+ A+A GK
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAK---------------EGK------ 325
Query: 331 LLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFM 390
L EAE F E +R I +I T N++++ + + + +I M
Sbjct: 326 --------------LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Query: 391 YESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKM 450
+ YN+L+ + + + R++ +G+ + ++Y +I+ + +
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431
Query: 451 TEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSI 510
A+ + +M P+++TYNT + N +A+ V + + K +PD TYN +
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Query: 511 VDWYCKLHLREEAYNFVHNLS 531
+ CK E+ ++ +LS
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLS 512
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 157/308 (50%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L DM + + P++ TFN+LI EA +LF+E+ + P++VTYN+L++ +
Sbjct: 297 LLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC 356
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
R EA ++ M S+ P +VTY +LI+ + + + + +EL M + + +
Sbjct: 357 MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TYTTL+ GF A + A VF++M + G PNI T+N L+ G + VF+ +
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ + PDI T+N + + G + +F + G P+ +NT+IS + + G
Sbjct: 477 QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLK 536
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
++A ++ +M E G PD TYN ++ A R G S +++ EM + R + TY +
Sbjct: 537 EEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 596
Query: 301 LHAYANGK 308
+G+
Sbjct: 597 TDMLHDGR 604
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 145/280 (51%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M + + P++ T+N+LI+ +EA ++F + PD+VTYN L++ + K++
Sbjct: 335 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAK 394
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ + ME+ + M RG + VTYT+LI + + + A + QMV + P++ TY
Sbjct: 395 KVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYN 454
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
TLL G K E AM VFE ++ + +P+I T+N + + G + +F +
Sbjct: 455 TLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLK 514
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
PD++ +NT+++ F + GL E +F +MK G +P+ T+NTLI A+ R G +
Sbjct: 515 GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAAS 574
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLS 283
+ K M D STY V L G L + +VLS
Sbjct: 575 AELIKEMRSCRFAGDASTYGLVTDMLHDGRLDKGFLEVLS 614
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 105/205 (51%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ DM +GL + T+ TLI S + A +F+++ G+ P+++TYN LLD
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K+ + ++AM V + ++ P I TY + + G +E+ +L + K +KPDV
Sbjct: 462 KNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 521
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
Y T++SGF E A +F +M+ G P+ T+N LI+ + G A ++ KE+
Sbjct: 522 AYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLD 205
++C+ + D T+ + + LD
Sbjct: 582 RSCRFAGDASTYGLVTDMLHDGRLD 606
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 143/497 (28%), Positives = 242/497 (48%), Gaps = 11/497 (2%)
Query: 55 LLDVYGKSRRPK---EAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMV 111
+L ++ +S R E++ +L+ M +G+ P ++ T LI + + +A+ + +++
Sbjct: 92 MLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EIL 150
Query: 112 EKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFA 171
EK +PDV+ Y L++GF + + A RV + MR+ P+ T+N +I RG
Sbjct: 151 EKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD 210
Query: 172 EMGKVFKEIKACQCSPDIVTWNTLL-AVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTL 230
KV ++ + C P ++T+ L+ A + G+D E + EM G P+ T+NT+
Sbjct: 211 LALKVLNQLLSDNCQPTVITYTILIEATMLEGGVD-EALKLMDEMLSRGLKPDMFTYNTI 269
Query: 231 ISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRC 290
I + G D+A + + + G PD+ +YN +L AL G WE+ EK++++M + +C
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 291 KPNEVTYSSLLHAYA-NGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAE 349
PN VTYS L+ +GK E MN L G +T A L+ + L A
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG-LTPDAYSYDPLIAAFCREGRLDVAI 388
Query: 350 HAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMY-L 408
G DI N +L+ + + +I + E G + + YN++ L
Sbjct: 389 EFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448
Query: 409 HSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPD 468
S R MIL E++ GI+PD I+YN +I CR G + EA +L +M+ P
Sbjct: 449 WSSGDKIRALHMIL-EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPS 507
Query: 469 VVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVH 528
VVTYN + + +AI V++ M+ GC+P++ TY +++ R EA +
Sbjct: 508 VVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELAN 567
Query: 529 NLSSLDLHVSEEEKGRL 545
+L +D +SE RL
Sbjct: 568 DLVRID-AISEYSFKRL 583
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 223/453 (49%), Gaps = 43/453 (9%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV 71
PD+ +N LI+ + ++A + + ++ PD VTYN ++ + A++V
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 72 LKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVN 131
L Q+ S P+++TYT LI A + +G ++EAL+L ++M+ + +KPD++TY T++ G
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC- 274
Query: 132 AKKDELAMRVFEEMRT---AGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPD 188
K+ + R FE +R GC+P++ ++N L++ ++G + E K+ ++ + +C P+
Sbjct: 275 --KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
Query: 189 IVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYK 248
+VT++ L+ ++G E + K MK G P+ +++ LI+A+ R G D A +
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392
Query: 249 RMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA-YANG 307
M+ G PD+ YN VLA L + G +Q+ ++ ++ C PN +Y+++ A +++G
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Query: 308 KEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTL 367
+K+ AL H LE GI D T
Sbjct: 453 ---DKIRAL---------------------------------HMILEMMSNGIDPDEITY 476
Query: 368 NAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILE 427
N+M+S R+ +V + ++L M F S+ YN ++ + + +L ++
Sbjct: 477 NSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVG 536
Query: 428 KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEM 460
G P+ +Y ++I G EA + N++
Sbjct: 537 NGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 168/331 (50%), Gaps = 7/331 (2%)
Query: 2 LMD-MKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
LMD M S+GL PD+ T+NT+I C+ G + + A E+ ++L G PD+++YN LL
Sbjct: 250 LMDEMLSRGLKPDMFTYNTIIRGMCKEG-MVDRAFEMVRNLELKGCEPDVISYNILLRAL 308
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
+ +E +++ +M S P++VTY+ LI+ RDG +EEA+ L M EK + PD
Sbjct: 309 LNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 368
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
Y+Y L++ F + ++A+ E M + GC P+I +N ++ G + ++F +
Sbjct: 369 YSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGK 428
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+ CSP+ ++NT+ + +G + EM G P+ T+N++IS R G
Sbjct: 429 LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGM 488
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
D+A + M P + TYN VL + E + VL M C+PNE TY+
Sbjct: 489 VDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTV 548
Query: 300 LLHAYANGKEFEKMNALAEEIYSGKITTHAV 330
L+ G F A A E+ + + A+
Sbjct: 549 LIE----GIGFAGYRAEAMELANDLVRIDAI 575
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 141/490 (28%), Positives = 239/490 (48%), Gaps = 8/490 (1%)
Query: 29 LYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYT 88
+ EA +LF ++ G+ P + LLD K+++ + + V + F PS Y
Sbjct: 124 MISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYG 183
Query: 89 SLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTA 148
I A V+ + + LEL N+M I P V+ Y L+ G K+ A ++F+EM
Sbjct: 184 KAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLAR 243
Query: 149 GCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEV 208
P++ T+N LI Y G + KV + +KA P ++T+NTLL + G+ +
Sbjct: 244 RLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDA 303
Query: 209 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAA 268
V KEMK GFVP+ TF+ L YS + A VY+ +++GV + T + +L A
Sbjct: 304 ENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNA 363
Query: 269 LARGGLWEQSEKVLS-EMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITT 327
L + G E++E++L EM G PNEV Y++++ Y + E + +
Sbjct: 364 LCKEGKIEKAEEILGREMAKGLV-PNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKP 422
Query: 328 HAVLLKTLVLVNSKFDFLAEAEHAFLEFKK---RGIPHDITTLNAMLSLYGRKKLVAKTN 384
+ L+ +F L E E+A E K +G+ + T N ++ YGRK K
Sbjct: 423 DHLAYNCLI---RRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479
Query: 385 KILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAY 444
ILK M ++G ++ Y +L+ + +++++ R++ ++G+ P + YN++I
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539
Query: 445 CRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQ 504
C GK+ +A R EM ++VTYNT + + EA ++ + ++G KPD
Sbjct: 540 CSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDV 599
Query: 505 NTYNSIVDWY 514
TYNS++ Y
Sbjct: 600 FTYNSLISGY 609
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 146/555 (26%), Positives = 257/555 (46%), Gaps = 14/555 (2%)
Query: 4 DMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
+M ++ L P L T+NTLI C+AG+ E++ ++ E +K + P ++T+N LL K+
Sbjct: 239 EMLARRLLPSLITYNTLIDGYCKAGN-PEKSFKVRERMKADHIEPSLITFNTLLKGLFKA 297
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
++A VLK+M+ GF P T++ L Y + E AL + V+ +K + YT
Sbjct: 298 GMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTC 357
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
+ LL+ K E A + G PN +N +I Y +G + ++
Sbjct: 358 SILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEK 417
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
PD + +N L+ F + G +MK G P ET+N LI Y R FD+
Sbjct: 418 QGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDK 477
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
+ K M + G P++ +Y ++ L +G +++ V +ME+ P Y+ L+
Sbjct: 478 CFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLID 537
Query: 303 AYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPH 362
+ + E ++E+ I + V TL+ S L+EAE LE ++G+
Sbjct: 538 GCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKP 597
Query: 363 DITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMIL 422
D+ T N+++S YG V + + + M SG +L Y+ L+ L ++ E+
Sbjct: 598 DVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTK----EGIELTE 653
Query: 423 REILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAAN 482
R E ++PDL+ YN V++ Y +G M +A + +M + + D TYN+ +
Sbjct: 654 RLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKV 713
Query: 483 SMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSS----LDLHVS 538
E ++ M + +P+ +TYN IV +C++ AY + + LD+ +
Sbjct: 714 GKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIG 773
Query: 539 EEEKGRLLERIAEKW 553
E L+ + E+W
Sbjct: 774 NE----LVSGLKEEW 784
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 216/477 (45%), Gaps = 4/477 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +MK G PD TF+ L + E AL ++E +G++ + T + LL+
Sbjct: 306 VLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALC 365
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K + ++A E+L + ++G P+ V Y ++I Y R G L A M ++ +KPD
Sbjct: 366 KEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHL 425
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
Y L+ F + E A + +M+ G P++ T+N LI YG + F + + KE+
Sbjct: 426 AYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEM 485
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ P++V++ TL+ + E V ++M+ G P+ +N LI G
Sbjct: 486 EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKI 545
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
+ A K ML+ G+ +L TYN ++ L+ G ++E +L E+ KP+ TY+SL
Sbjct: 546 EDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSL 605
Query: 301 LHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI 360
+ Y ++ AL EE+ I L+ + +K + + E F E +
Sbjct: 606 ISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTK-EGIELTERLFGEM---SL 661
Query: 361 PHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEM 420
D+ N +L Y + K + K M E L YNSL+ + +
Sbjct: 662 KPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRS 721
Query: 421 ILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVA 477
++ E+ + +EP+ +YNI++ +C A EM++ + DV N V+
Sbjct: 722 LIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVS 778
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 111/455 (24%), Positives = 203/455 (44%), Gaps = 41/455 (9%)
Query: 7 SQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRP 65
++GL P+ +NT+I CR G L +++ E ++ G++PD + YN L+ + +
Sbjct: 382 AKGLVPNEVIYNTMIDGYCRKGDLVGARMKI-EAMEKQGMKPDHLAYNCLIRRFCELGEM 440
Query: 66 KEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTL 125
+ A + + +M+ +G PS+ TY LI Y R ++ ++ +M + P+V +Y TL
Sbjct: 441 ENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTL 500
Query: 126 LSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQC 185
++ K A V +M G P + +N LI +G + + KE+
Sbjct: 501 INCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGI 560
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
++VT+NTL+ G SE + E+ R G P+ T+N+LIS Y G+ + A
Sbjct: 561 ELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIA 620
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA 305
+Y+ M +G+ P L TY+ +++ + G+ E +E++ EM KP+ + Y+ +LH YA
Sbjct: 621 LYEEMKRSGIKPTLKTYHLLISLCTKEGI-ELTERLFGEMS---LKPDLLVYNGVLHCYA 676
Query: 306 NGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDIT 365
+ EK L +++ I +L+L K L E E R + +
Sbjct: 677 VHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEAD 736
Query: 366 TLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREI 425
T YN ++ H +++ + + RE+
Sbjct: 737 T-----------------------------------YNIIVKGHCEVKDYMSAYVWYREM 761
Query: 426 LEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEM 460
EKG D+ N ++ + EA+ +++EM
Sbjct: 762 QEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 188/428 (43%)
Query: 99 LLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFN 158
++ EA +L + + I P + T LL V K+ + + VF + + +P+ +
Sbjct: 124 MISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYG 183
Query: 159 ALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRA 218
I+ + ++F +K + P + +N L+ + ++ +F EM
Sbjct: 184 KAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLAR 243
Query: 219 GFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQS 278
+P T+NTLI Y + G+ +++ V +RM + P L T+N +L L + G+ E +
Sbjct: 244 RLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDA 303
Query: 279 EKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLV 338
E VL EM++ P+ T+S L Y++ ++ E + E + +A L+
Sbjct: 304 ENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNA 363
Query: 339 NSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLS 398
K + +AE +G+ + N M+ Y RK + ++ M + G
Sbjct: 364 LCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPD 423
Query: 399 LPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILN 458
YN L+ +E + ++ KG+ P + +YNI+I Y R + + IL
Sbjct: 424 HLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILK 483
Query: 459 EMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLH 518
EM+D +P+VV+Y T + S EA V + M +G P YN ++D C
Sbjct: 484 EMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKG 543
Query: 519 LREEAYNF 526
E+A+ F
Sbjct: 544 KIEDAFRF 551
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 142/287 (49%), Gaps = 7/287 (2%)
Query: 4 DMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
DM+ +G++P + +N LI CC G + E+A +E+ G+ ++VTYN L+D +
Sbjct: 519 DMEDRGVSPKVRIYNMLIDGCCSKGKI-EDAFRFSKEMLKKGIELNLVTYNTLIDGLSMT 577
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
+ EA ++L ++ +G P + TY SLIS Y G ++ + L +M IKP + TY
Sbjct: 578 GKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTY 637
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
L+S + EL R+F EM KP++ +N ++ Y G + + K++
Sbjct: 638 HLLIS-LCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIE 693
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
D T+N+L+ + G EV + EM PE +T+N ++ + +
Sbjct: 694 KSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMS 753
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGR 289
A Y+ M E G D+ N +++ L +++E V+SEM NGR
Sbjct: 754 AYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM-NGR 799
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 133/320 (41%)
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
VF + + F P + + I A + + ++ RM + P + YN ++ L
Sbjct: 166 VFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLC 225
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAV 330
+G +E++ EM R P+ +TY++L+ Y EK + E + + I +
Sbjct: 226 KGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLI 285
Query: 331 LLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFM 390
TL+ K + +AE+ E K G D T + + Y + + +
Sbjct: 286 TFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETA 345
Query: 391 YESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKM 450
+SG ++ + L+ + K+E IL + KG+ P+ + YN +I YCR G +
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405
Query: 451 TEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSI 510
A+ + M+ PD + YN + + A V M +G P TYN +
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNIL 465
Query: 511 VDWYCKLHLREEAYNFVHNL 530
+ Y + + ++ ++ + +
Sbjct: 466 IGGYGRKYEFDKCFDILKEM 485
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 149/349 (42%), Gaps = 18/349 (5%)
Query: 191 TWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRM 250
++ L + ++ + SE + +F ++ G P ++ L+ + F V+ +
Sbjct: 111 SYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNI 170
Query: 251 LEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEF 310
LE+ P Y + A + + ++ + M++ R P+ Y+ L+ GK
Sbjct: 171 LESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRM 230
Query: 311 EKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKR------GIPHDI 364
L +E+ + + LL +L+ N+ D +A + FK R I +
Sbjct: 231 NDAEQLFDEMLARR------LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSL 284
Query: 365 TTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILRE 424
T N +L + +V +LK M + GF ++ L +S + +
Sbjct: 285 ITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYET 344
Query: 425 ILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSM 484
++ G++ + + +I++ A C+ GK+ +A+ IL VP+ V YNT + Y
Sbjct: 345 AVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRK-- 402
Query: 485 FGEAIGV---VQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
G+ +G ++ M KQG KPD YN ++ +C+L E A V+ +
Sbjct: 403 -GDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKM 450
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 2/203 (0%)
Query: 331 LLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFM 390
LL +++L SK ++EA F + GI +L +L + K T + +
Sbjct: 113 LLLSVLLNESKM--ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNI 170
Query: 391 YESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKM 450
ES F S Y + + + K + + I P + YN++I C+ +M
Sbjct: 171 LESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRM 230
Query: 451 TEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSI 510
+A+++ +EM +P ++TYNT + Y ++ V + M +P T+N++
Sbjct: 231 NDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTL 290
Query: 511 VDWYCKLHLREEAYNFVHNLSSL 533
+ K + E+A N + + L
Sbjct: 291 LKGLFKAGMVEDAENVLKEMKDL 313
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 150/535 (28%), Positives = 242/535 (45%), Gaps = 41/535 (7%)
Query: 2 LMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGK 61
L M+ G + ++N LI EA+E++ + L G RP + TY++L+ GK
Sbjct: 176 LRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGK 235
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYT 121
R M +LK+ME+ G P++ T+T I R G + EA E+ +M ++ PDV T
Sbjct: 236 RRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVT 295
Query: 122 YTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK 181
YT L+ A+K + A VFE+M+T KP
Sbjct: 296 YTVLIDALCTARKLDCAKEVFEKMKTGRHKP----------------------------- 326
Query: 182 ACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFD 241
D VT+ TLL F N V + EM++ G VP+ TF L+ A + G+F
Sbjct: 327 ------DRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFG 380
Query: 242 QARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL 301
+A M + G+ P+L TYN ++ L R + + ++ ME+ KP TY +
Sbjct: 381 EAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFI 440
Query: 302 HAYANGKEFEKMNALA--EEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRG 359
Y GK + ++AL E++ + I + V + +K EA+ F K G
Sbjct: 441 DYY--GKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIG 498
Query: 360 IPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLM-YLHSRTRNFRKS 418
+ D T N M+ Y + + + K+L M E+G + NSL+ L+ R
Sbjct: 499 LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAW 558
Query: 419 EMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVAT 478
+M +R + E ++P +++YN ++ +NGK+ EA + M P+ +T+NT
Sbjct: 559 KMFMR-MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDC 617
Query: 479 YAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSL 533
N A+ ++ M+ GC PD TYN+I+ K +EA F H + L
Sbjct: 618 LCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL 672
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 146/569 (25%), Positives = 242/569 (42%), Gaps = 37/569 (6%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L M +G PD+ T+ LI + A E+FE++K +PD VTY LLD +
Sbjct: 280 ILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFS 339
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+R + +ME G P +VT+T L+ A + G EA + + M ++ I P+++
Sbjct: 340 DNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLH 399
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY TL+ G + + + A+ +F M + G KP T+ I YG G + F+++
Sbjct: 400 TYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKM 459
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
K +P+IV N L + G D E +F +K G VP+ T+N ++ YS+ G
Sbjct: 460 KTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEI 519
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
D+A + M+E G PD+ N+++ L + +++ K+ M+ + KP VTY++L
Sbjct: 520 DEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTL 579
Query: 301 LHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI 360
L + ++ L E + + + TL K D + A + G
Sbjct: 580 LAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGC 639
Query: 361 PHDITTLNAMLSLYGRKKLVAKT----NKILKFMYESGFTLS--LPGY------------ 402
D+ T N ++ + V + +++ K +Y TL LPG
Sbjct: 640 VPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKI 699
Query: 403 --NSLMYLHSRTRNFRKSEMILREILEKGIEPDL-ISYNIVIYAYCRNGKM--------- 450
N L + N ++I + E GI+ + S +V CR+G
Sbjct: 700 ITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYS 759
Query: 451 -----TEAKRILNE--MKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPD 503
R L E KD P + TYN + M A V + GC PD
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819
Query: 504 QNTYNSIVDWYCKLHLREEAYNFVHNLSS 532
TYN ++D Y K +E + +S+
Sbjct: 820 VATYNFLLDAYGKSGKIDELFELYKEMST 848
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/502 (26%), Positives = 230/502 (45%), Gaps = 2/502 (0%)
Query: 16 TFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQM 75
T N ++ R EE +F+ ++ ++ D TY + K+A L++M
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM 179
Query: 76 ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKD 135
GF + +Y LI ++ EA+E+ +M+ + +P + TY++L+ G +
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI 239
Query: 136 ELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTL 195
+ M + +EM T G KPN+ TF I++ G G E ++ K + C PD+VT+ L
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 299
Query: 196 L-AVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAG 254
+ A+ LD VF++MK P+R T+ TL+ +S D + + M + G
Sbjct: 300 IDALCTARKLDC-AKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 358
Query: 255 VTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMN 314
PD+ T+ ++ AL + G + ++ L M + PN TY++L+ +
Sbjct: 359 HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 418
Query: 315 ALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLY 374
L + S + A + K A F + K +GI +I NA L
Sbjct: 419 ELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSL 478
Query: 375 GRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDL 434
+ + +I + + G YN +M +S+ ++ +L E++E G EPD+
Sbjct: 479 AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDV 538
Query: 435 ISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQC 494
I N +I + ++ EA ++ MK+ P VVTYNT +A N EAI + +
Sbjct: 539 IVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEG 598
Query: 495 MIKQGCKPDQNTYNSIVDWYCK 516
M+++GC P+ T+N++ D CK
Sbjct: 599 MVQKGCPPNTITFNTLFDCLCK 620
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 141/545 (25%), Positives = 247/545 (45%), Gaps = 35/545 (6%)
Query: 5 MKSQGLAPDLCTFN-TLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
MK++G+AP++ N +L S +AG EA ++F +K GL PD VTYN ++ Y K
Sbjct: 459 MKTKGIAPNIVACNASLYSLAKAGR-DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVG 517
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
EA+++L +M G P ++ SLI+ + ++EA ++ +M E +KP V TY
Sbjct: 518 EIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYN 577
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
TLL+G K + A+ +FE M GC PN TFN L K+ ++
Sbjct: 578 TLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDM 637
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLI----------SA 233
C PD+ T+NT++ +NG E F +MK+ + P+ T TL+ A
Sbjct: 638 GCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCTLLPGVVKASLIEDA 696
Query: 234 YSRCGSF-----DQARAVYKRMLEAGVTPDLSTYNAVLAA--LARGGLWEQSEKVLSEME 286
Y +F DQ ++ L + + NAV + L G+ + +L +
Sbjct: 697 YKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPII 756
Query: 287 NGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLA 346
CK N V+ + L FEK + K+ T+ +L+ L+ + D +
Sbjct: 757 RYSCKHNNVSGARTL--------FEKFTK--DLGVQPKLPTYNLLIGGLL----EADMIE 802
Query: 347 EAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLM 406
A+ FL+ K G D+ T N +L YG+ + + ++ K M + +N ++
Sbjct: 803 IAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVI 862
Query: 407 YLHSRTRNFRKSEMILREIL-EKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAP 465
+ N + + +++ ++ P +Y +I ++G++ EAK++ M D
Sbjct: 863 SGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGC 922
Query: 466 VPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYN 525
P+ YN + + A + + M+K+G +PD TY+ +VD C + +E +
Sbjct: 923 RPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLH 982
Query: 526 FVHNL 530
+ L
Sbjct: 983 YFKEL 987
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 140/596 (23%), Positives = 259/596 (43%), Gaps = 78/596 (13%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
+K GL PD T+N ++ C +EA++L E+ G PD++ N+L++ K+ R
Sbjct: 494 LKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADR 553
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
EA ++ +M+ P++VTY +L++ ++G ++EA+EL MV+K P+ T+ T
Sbjct: 554 VDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNT 613
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA-- 182
L + LA+++ +M GC P++ T+N +I G E F ++K
Sbjct: 614 LFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLV 673
Query: 183 -------CQCSPDIVT--------------------------WNTLL-AVFGQNGLDSEV 208
C P +V W L+ ++ + G+D+ V
Sbjct: 674 YPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAV 733
Query: 209 SGVFKEMKRA-GFVPERETFNTLISAYS-RCGSFDQARAVYKRML-EAGVTPDLSTYNAV 265
S F E A G + ++ I YS + + AR ++++ + GV P L TYN +
Sbjct: 734 S--FSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLL 791
Query: 266 LAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYS--- 322
+ L + E ++ V ++++ C P+ TY+ LL AY + +++ L +E+ +
Sbjct: 792 IGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHEC 851
Query: 323 -GKITTHAVLLKTLV------------------------------LVN--SKFDFLAEAE 349
TH +++ LV L++ SK L EA+
Sbjct: 852 EANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAK 911
Query: 350 HAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLH 409
F G + N +++ +G+ + K M + G L Y+ L+
Sbjct: 912 QLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 971
Query: 410 SRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPV-PD 468
+ +E+ E G+ PD++ YN++I ++ ++ EA + NEMK + PD
Sbjct: 972 CMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPD 1031
Query: 469 VVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAY 524
+ TYN+ + M EA + + + G +P+ T+N+++ Y E AY
Sbjct: 1032 LYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAY 1087
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 167/320 (52%), Gaps = 2/320 (0%)
Query: 6 KSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRP 65
K G+ P L T+N LI + E A ++F ++K G PD+ TYN LLD YGKS +
Sbjct: 777 KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKI 836
Query: 66 KEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALEL-KNQMVEKHIKPDVYTYTT 124
E E+ K+M + + +T+ +IS V+ G +++AL+L + M ++ P TY
Sbjct: 837 DELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGP 896
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
L+ G + + A ++FE M GC+PN +N LI +G G +FK +
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
PD+ T++ L+ G E FKE+K +G P+ +N +I+ + ++A
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016
Query: 245 AVYKRMLEA-GVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
++ M + G+TPDL TYN+++ L G+ E++ K+ +E++ +PN T+++L+
Sbjct: 1017 VLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1076
Query: 304 YANGKEFEKMNALAEEIYSG 323
Y+ + E A+ + + +G
Sbjct: 1077 YSLSGKPEHAYAVYQTMVTG 1096
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 201/450 (44%)
Query: 86 TYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEM 145
T ++ A DG LEE + + M ++ IK D TY T+ + A +M
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM 179
Query: 146 RTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLD 205
R G N ++N LI + E +V++ + P + T+++L+ G+
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI 239
Query: 206 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAV 265
V G+ KEM+ G P TF I R G ++A + KRM + G PD+ TY +
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 299
Query: 266 LAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKI 325
+ AL + +++V +M+ GR KP+ VTY +LL +++ ++ + + E+
Sbjct: 300 IDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGH 359
Query: 326 TTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNK 385
V LV K EA + +GI ++ T N ++ R + +
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 419
Query: 386 ILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYC 445
+ M G + Y + + ++ + + ++ KGI P++++ N +Y+
Sbjct: 420 LFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLA 479
Query: 446 RNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQN 505
+ G+ EAK+I +KD VPD VTYN + Y+ EAI ++ M++ GC+PD
Sbjct: 480 KAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVI 539
Query: 506 TYNSIVDWYCKLHLREEAYNFVHNLSSLDL 535
NS+++ K +EA+ + + L
Sbjct: 540 VVNSLINTLYKADRVDEAWKMFMRMKEMKL 569
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 129/549 (23%), Positives = 228/549 (41%), Gaps = 82/549 (14%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M +G P+ TFNTL C AL++ ++ G PD+ TYN ++ K+ +
Sbjct: 599 MVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQ 658
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQ--------------- 109
KEAM QM+ +P VT +L+ V+ L+E+A ++
Sbjct: 659 VKEAMCFFHQMKKLVYP-DFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWE 717
Query: 110 ------MVEKHIKPDVYTYTTLLSGFVNAKKDEL----------------AMRVFEEM-R 146
+ E I V L++ + D + A +FE+ +
Sbjct: 718 DLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTK 777
Query: 147 TAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDS 206
G +P + T+N LI + M VF ++K+ C PD+ T+N LL +G++G
Sbjct: 778 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKID 837
Query: 207 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRML-EAGVTPDLSTYNAV 265
E+ ++KEM T N +IS + G+ D A +Y ++ + +P TY +
Sbjct: 838 ELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPL 897
Query: 266 LAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNAL----AEEIY 321
+ L++ G +++++ M + C+PN Y+ L++ + E + AL +E
Sbjct: 898 IDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGV 957
Query: 322 SGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVA 381
+ T++VL+ L +V + E H F E K+ G+ D+ N +++ G+ +
Sbjct: 958 RPDLKTYSVLVDCLCMVGR----VDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLE 1013
Query: 382 KTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVI 441
+ + M S +GI PDL +YN +I
Sbjct: 1014 EALVLFNEMKTS----------------------------------RGITPDLYTYNSLI 1039
Query: 442 YAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCK 501
G + EA +I NE++ P+V T+N + Y+ + A V Q M+ G
Sbjct: 1040 LNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFS 1099
Query: 502 PDQNTYNSI 510
P+ TY +
Sbjct: 1100 PNTGTYEQL 1108
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 148/302 (49%), Gaps = 2/302 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ + +KS G PD+ T+N L+ +E EL++E+ + +T+N ++
Sbjct: 807 VFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLV 866
Query: 61 KSRRPKEAMEVLKQ-MESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
K+ +A+++ M R F P+ TY LI + G L EA +L M++ +P+
Sbjct: 867 KAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNC 926
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
Y L++GF A + + A +F+ M G +P++ T++ L+ G E FKE
Sbjct: 927 AIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKE 986
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRA-GFVPERETFNTLISAYSRCG 238
+K +PD+V +N ++ G++ E +F EMK + G P+ T+N+LI G
Sbjct: 987 LKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAG 1046
Query: 239 SFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYS 298
++A +Y + AG+ P++ T+NA++ + G E + V M G PN TY
Sbjct: 1047 MVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYE 1106
Query: 299 SL 300
L
Sbjct: 1107 QL 1108
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 198 bits (504), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 136/554 (24%), Positives = 255/554 (46%), Gaps = 18/554 (3%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
+KS+ L P + FN L+S ++ + L E+++ G+ ++ TYN L++ + + +
Sbjct: 2 VKSRPL-PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
A+ +L +M G+ PSIVT +SL++ Y + +A+ L +QMVE +PD T+TT
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
L+ G K A+ + + M GC+PN+ T+ ++ RG + +++A +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
D+V +NT++ + + +FKEM+ G P T+++LIS G + A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
+ M+E + P+L T+NA++ A + G + ++EK+ +M P+ TY+SL++ +
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 305 ANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDI 364
+K + E + S TL+ K + + F E RG+ D
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 365 TTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILRE 424
T ++ K+ K M G + Y+ L+ K+ +
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 420
Query: 425 ILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSM 484
+ + I+ D+ Y +I C+ GK+ + + + P+VVTYNT ++ + +
Sbjct: 421 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 480
Query: 485 FGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLRE-------------EAYNFVHNLS 531
EA +++ M + G PD TYN+++ + HLR+ + FV + S
Sbjct: 481 LQEAYALLKKMKEDGPLPDSGTYNTLI----RAHLRDGDKAASAELIREMRSCRFVGDAS 536
Query: 532 SLDLHVSEEEKGRL 545
++ L + GRL
Sbjct: 537 TIGLVANMLHDGRL 550
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 174/321 (54%), Gaps = 2/321 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L M++ + D+ FNT+I S C+ + ++AL LF+E++ G+RP++VTY++L+
Sbjct: 172 LLNKMEAAKIEADVVIFNTIIDSLCKYRHV-DDALNLFKEMETKGIRPNVVTYSSLISCL 230
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
R +A ++L M + P++VT+ +LI A+V++G EA +L + M+++ I PD+
Sbjct: 231 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDI 290
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
+TY +L++GF + + A ++FE M + C P++ T+N LIK + + ++F+E
Sbjct: 291 FTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFRE 350
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+ D VT+ TL+ +G VFK+M G P+ T++ L+ G
Sbjct: 351 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 410
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
++A V+ M ++ + D+ Y ++ + + G + + + KPN VTY++
Sbjct: 411 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 470
Query: 300 LLHAYANGKEFEKMNALAEEI 320
++ + + ++ AL +++
Sbjct: 471 MISGLCSKRLLQEAYALLKKM 491
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 165/326 (50%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M+++G+ P++ T+++LISC + + +A +L ++ + P++VT+NAL+D + K
Sbjct: 210 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 269
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ EA ++ M R P I TY SLI+ + L++A ++ MV K PD+ TY
Sbjct: 270 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYN 329
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
TL+ GF +K+ E +F EM G + T+ LI+ G KVFK++ +
Sbjct: 330 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 389
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
PDI+T++ LL NG + VF M+++ + + T+I + G D
Sbjct: 390 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 449
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
++ + GV P++ TYN +++ L L +++ +L +M+ P+ TY++L+ A
Sbjct: 450 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Query: 304 YANGKEFEKMNALAEEIYSGKITTHA 329
+ + L E+ S + A
Sbjct: 510 HLRDGDKAASAELIREMRSCRFVGDA 535
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 191/422 (45%), Gaps = 3/422 (0%)
Query: 110 MVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGM 169
MV+ P ++ + LLS KK +L + + E+M+ G N+ T+N LI + R
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 170 FAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNT 229
+ + ++ P IVT ++LL + S+ + +M G+ P+ TF T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 230 LISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGR 289
LI +A A+ RM++ G P+L TY V+ L + G + + +L++ME +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 290 CKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAE 349
+ + V +++++ + + + L +E+ + I + V +L+ + ++A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 350 HAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLH 409
+ ++ I ++ T NA++ + ++ + K+ M + + YNSL+
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 410 SRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDV 469
K++ + ++ K PDL +YN +I +C++ ++ + + EM V D
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 470 VTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYC---KLHLREEAYNF 526
VTY T + + A V + M+ G PD TY+ ++D C KL E +++
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 420
Query: 527 VH 528
+
Sbjct: 421 MQ 422
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 140/280 (50%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
DM + + PD+ T+N+LI+ ++A ++FE + PD+ TYN L+ + KS+
Sbjct: 280 DMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSK 339
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
R ++ E+ ++M RG VTYT+LI DG + A ++ QMV + PD+ TY+
Sbjct: 340 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 399
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
LL G N K E A+ VF+ M+ + K +I + +I+ G + +F +
Sbjct: 400 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 459
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
P++VT+NT+++ L E + K+MK G +P+ T+NTLI A+ R G +
Sbjct: 460 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAAS 519
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLS 283
+ + M D ST V L G L + +LS
Sbjct: 520 AELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDMLS 559
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 155/316 (49%), Gaps = 3/316 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L DM + + P+L TFN LI + EA +L +++ + PD+ TYN+L++ +
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
R +A ++ + M S+ P + TY +LI + + +E+ EL +M + + D
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TYTTL+ G + + A +VF++M + G P+I T++ L+ + G + +VF +
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ + DI + T++ + G + +F + G P T+NT+IS
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVT---Y 297
+A A+ K+M E G PD TYN ++ A R G S +++ EM + R + T
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 541
Query: 298 SSLLHAYANGKEFEKM 313
+++LH K F M
Sbjct: 542 ANMLHDGRLDKSFLDM 557
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 240/467 (51%), Gaps = 11/467 (2%)
Query: 52 YNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGL-LEEALELKNQM 110
++ ++ Y + +A+ ++ ++ GF P +++Y +++ A +R + A + +M
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 111 VEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMF 170
+E + P+V+TY L+ GF A ++A+ +F++M T GC PN+ T+N LI Y
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 171 AEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTL 230
+ K+ + + P+++++N ++ + G EVS V EM R G+ + T+NTL
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 231 ISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEME-NGR 289
I Y + G+F QA ++ ML G+TP + TY +++ ++ + G ++ + L +M G
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 290 CKPNEVTYSSLLHAYAN----GKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFL 345
C PNE TY++L+ ++ + + + + + +S + T+ L+ + D +
Sbjct: 377 C-PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 346 AEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSL 405
A E + K++G+ D+ + + +LS + R V + ++ + M E G Y+SL
Sbjct: 436 AVLE----DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491
Query: 406 MYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAP 465
+ R +++ + E+L G+ PD +Y +I AYC G + +A ++ NEM +
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Query: 466 VPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
+PDVVTY+ + S EA ++ + + P TY+++++
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 132/535 (24%), Positives = 250/535 (46%), Gaps = 21/535 (3%)
Query: 13 DLC-----TFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKE 67
DLC F+ ++ SL ++AL + + G P +++YNA+LD +S+R
Sbjct: 128 DLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNIS 187
Query: 68 AME-VLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLL 126
E V K+M P++ TY LI + G ++ AL L ++M K P+V TY TL+
Sbjct: 188 FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLI 247
Query: 127 SGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCS 186
G+ +K + ++ M G +PN+ ++N +I G E+ V E+ S
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307
Query: 187 PDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAV 246
D VT+NTL+ + + G + + EM R G P T+ +LI + + G+ ++A
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367
Query: 247 YKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYAN 306
+M G+ P+ TY ++ ++ G ++ +VL EM + P+ VTY++L++ +
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427
Query: 307 GKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITT 366
+ E A+ E++ ++ V T++ + + EA E ++GI D T
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Query: 367 LNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREIL 426
++++ + ++ + + + M G Y +L+ + + K+ + E++
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Query: 427 EKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVAT-------- 478
EKG+ PD+++Y+++I + + EAKR+L ++ VP VTY+T +
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKS 607
Query: 479 -------YAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNF 526
+ M EA V + M+ + KPD YN ++ +C+ +AY
Sbjct: 608 VVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTL 662
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/469 (24%), Positives = 228/469 (48%), Gaps = 17/469 (3%)
Query: 5 MKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M+++G P++ T+NTLI C+ + ++ +L + L GL P++++YN +++ +
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKI-DDGFKLLRSMALKGLEPNLISYNVVINGLCREG 289
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
R KE VL +M RG+ VTY +LI Y ++G +AL + +M+ + P V TYT
Sbjct: 290 RMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYT 349
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
+L+ A AM ++MR G PN T+ L+ + +G E +V +E+
Sbjct: 350 SLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN 409
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
SP +VT+N L+ G + V ++MK G P+ +++T++S + R D+A
Sbjct: 410 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 469
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
V + M+E G+ PD TY++++ +++ + EM P+E TY++L++A
Sbjct: 470 LRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 529
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLE-FKKRGIPH 362
Y + EK L E+ + V L+ +K EA+ L+ F + +P
Sbjct: 530 YCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPS 589
Query: 363 DIT--------------TLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYL 408
D+T ++ +++ + K ++ + +++ + M YN +++
Sbjct: 590 DVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHG 649
Query: 409 HSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRIL 457
H R + RK+ + +E+++ G ++ ++ A + GK+ E ++
Sbjct: 650 HCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVI 698
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 144/572 (25%), Positives = 265/572 (46%), Gaps = 61/572 (10%)
Query: 4 DMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
+M ++P++ T+N LI C AG++ + AL LF++++ G P++VTYN L+D Y K
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNI-DVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
R+ + ++L+ M +G P++++Y +I+ R+G ++E + +M + D TY
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
TL+ G+ A+ + EM G P++ T+ +LI G + +++
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
P+ T+ TL+ F Q G +E V +EM GF P T+N LI+ + G +
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
A AV + M E G++PD+ +Y+ VL+ R +++ +V EM KP+ +TYSSL+
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Query: 303 AYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPH 362
+ + ++ L EE+ + L+ L +A E ++G+
Sbjct: 494 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP 553
Query: 363 DITTLNAMLSLYGRKKLVAKTNK-ILKFMYESGFTLSLPG---YNSLM---------YLH 409
D+ T + +++ ++ + + +LK YE S+P Y++L+ +
Sbjct: 554 DVVTYSVLINGLNKQSRTREAKRLLLKLFYEE----SVPSDVTYHTLIENCSNIEFKSVV 609
Query: 410 SRTRNF------RKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDP 463
S + F +++ + +L K +PD +YNI+I+ +CR G + +A + EM
Sbjct: 610 SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKS 669
Query: 464 APVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEA 523
+ VT I +V+ + K+G N NS++
Sbjct: 670 GFLLHTVT----------------VIALVKALHKEG---KVNELNSVI------------ 698
Query: 524 YNFVHNLSSLDLHVSEEEKGRLLERIAEKWIN 555
VH L S +L SE E+ ++L I + N
Sbjct: 699 ---VHVLRSCEL--SEAEQAKVLVEINHREGN 725
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 201/411 (48%), Gaps = 14/411 (3%)
Query: 138 AMRVFEEMRTAGCKPNICTFNALIK--MYGDRGM-FAEMGKVFKEIKACQCSPDIVTWNT 194
A+ + + G P + ++NA++ + R + FAE VFKE+ Q SP++ T+N
Sbjct: 153 ALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAE--NVFKEMLESQVSPNVFTYNI 210
Query: 195 LLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAG 254
L+ F G +F +M+ G +P T+NTLI Y + D + + M G
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG 270
Query: 255 VTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMN 314
+ P+L +YN V+ L R G ++ VL+EM +EVTY++L+ Y F +
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330
Query: 315 ALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLY 374
+ E+ +T + +L+ K + A + + RG+ + T ++ +
Sbjct: 331 VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGF 390
Query: 375 GRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDL 434
+K + + ++L+ M ++GF+ S+ YN+L+ H T + +L ++ EKG+ PD+
Sbjct: 391 SQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDV 450
Query: 435 ISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQC 494
+SY+ V+ +CR+ + EA R+ EM + PD +TY++ + + EA + +
Sbjct: 451 VSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEE 510
Query: 495 MIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEKGRL 545
M++ G PD+ TY ++++ YC E+A L LH EKG L
Sbjct: 511 MLRVGLPPDEFTYTALINAYCMEGDLEKA---------LQLHNEMVEKGVL 552
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 110/238 (46%), Gaps = 4/238 (1%)
Query: 315 ALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLY 374
A A G ++ +AVL T + SK + ++ AE+ F E + + ++ T N ++ +
Sbjct: 160 AQAHGFMPGVLSYNAVLDAT---IRSKRN-ISFAENVFKEMLESQVSPNVFTYNILIRGF 215
Query: 375 GRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDL 434
+ + M G ++ YN+L+ + + R +LR + KG+EP+L
Sbjct: 216 CFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNL 275
Query: 435 ISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQC 494
ISYN+VI CR G+M E +L EM D VTYNT + Y F +A+ +
Sbjct: 276 ISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAE 335
Query: 495 MIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEKGRLLERIAEK 552
M++ G P TY S++ CK A F+ + L +E L++ ++K
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQK 393
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 121/480 (25%), Positives = 225/480 (46%)
Query: 33 ALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLIS 92
A+ +F E G+ ++ +YN ++ + R KEA +L ME +G+ P +++Y+++++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 93 AYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKP 152
Y R G L++ +L M K +KP+ Y Y +++ K A F EM G P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 153 NICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVF 212
+ + LI + RG K F E+ + +PD++T+ +++ F Q G E +F
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 213 KEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARG 272
EM G P+ TF LI+ Y + G A V+ M++AG +P++ TY ++ L +
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 273 GLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLL 332
G + + ++L EM +PN TY+S+++ E+ L E + + V
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 333 KTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYE 392
TL+ K + +A+ E +G+ I T N +++ + ++ K+L +M
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 393 SGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTE 452
G + +NSL+ + N + + I +++ +G+ PD +Y ++ +C+ M E
Sbjct: 590 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 649
Query: 453 AKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
A + EMK V TY+ + + F EA V M ++G D+ ++ D
Sbjct: 650 AWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 192/392 (48%), Gaps = 2/392 (0%)
Query: 5 MKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
MK +GL P+ + ++I CR L EA E F E+ G+ PD V Y L+D + K
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKL-AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ A + +M SR P ++TYT++IS + + G + EA +L ++M K ++PD T+T
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
L++G+ A + A RV M AGC PN+ T+ LI G ++ E+
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
P+I T+N+++ ++G E + E + AG + T+ TL+ AY + G D+A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
+ + K ML G+ P + T+N ++ G+ E EK+L+ M PN T++SL+
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 605
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
Y + A+ +++ S + + LV + K + EA F E K +G
Sbjct: 606 YCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVS 665
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESGF 395
++T + ++ + ++K + ++ M G
Sbjct: 666 VSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/512 (22%), Positives = 224/512 (43%), Gaps = 36/512 (7%)
Query: 28 SLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS-RRPKEAMEVLKQMESRGFPPSIVT 86
L EA +FE++ GL + + N L K + A+ V ++ G ++ +
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 87 YTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMR 146
Y +I + G ++EA L M K PDV +Y+T+++G+ + + ++ E M+
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 147 TAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDS 206
G KPN + ++I G+ + K+ +
Sbjct: 309 RKGLKPNSYIYGSII------GLLCRICKL-----------------------------A 333
Query: 207 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVL 266
E F EM R G +P+ + TLI + + G A + M +TPD+ TY A++
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 267 AALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKIT 326
+ + G ++ K+ EM +P+ VT++ L++ Y + + + +
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 327 THAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKI 386
+ V TL+ K L A E K G+ +I T N++++ + + + K+
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 387 LKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCR 446
+ +G Y +LM + ++ K++ IL+E+L KG++P ++++N+++ +C
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 447 NGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNT 506
+G + + +++LN M P+ T+N+ V Y + A + + M +G PD T
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 507 YNSIVDWYCKLHLREEAYNFVHNLSSLDLHVS 538
Y ++V +CK +EA+ + VS
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEMKGKGFSVS 665
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 179/365 (49%), Gaps = 10/365 (2%)
Query: 4 DMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
+M QG+ PD + TLI C+ G + A + F E+ + PD++TY A++ + +
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDI-RAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
EA ++ +M +G P VT+T LI+ Y + G +++A + N M++ P+V TY
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
TTL+ G + A + EM G +PNI T+N+++ G E K+ E +A
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
+ D VT+ TL+ + ++G + + KEM G P TFN L++ + G +
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
+ ML G+ P+ +T+N+++ + + + +M + P+ TY +L+
Sbjct: 580 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 639
Query: 303 AYANGKEFEKMNALAEEI----YSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKR 358
+ + ++ L +E+ +S ++T++VL+K L KF EA F + ++
Sbjct: 640 GHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF-LKRKKF---LEAREVFDQMRRE 695
Query: 359 GIPHD 363
G+ D
Sbjct: 696 GLAAD 700
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 129/229 (56%), Gaps = 2/229 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L +M GL P++ T+N++++ C++G++ EEA++L E + AGL D VTY L+D Y
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNI-EEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
KS +A E+LK+M +G P+IVT+ L++ + G+LE+ +L N M+ K I P+
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
T+ +L+ + + A ++++M + G P+ T+ L+K + E +F+E
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 656
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFN 228
+K S + T++ L+ F + E VF +M+R G ++E F+
Sbjct: 657 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 121/480 (25%), Positives = 225/480 (46%)
Query: 33 ALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLIS 92
A+ +F E G+ ++ +YN ++ + R KEA +L ME +G+ P +++Y+++++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 93 AYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKP 152
Y R G L++ +L M K +KP+ Y Y +++ K A F EM G P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 153 NICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVF 212
+ + LI + RG K F E+ + +PD++T+ +++ F Q G E +F
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 213 KEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARG 272
EM G P+ TF LI+ Y + G A V+ M++AG +P++ TY ++ L +
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 273 GLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLL 332
G + + ++L EM +PN TY+S+++ E+ L E + + V
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 333 KTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYE 392
TL+ K + +A+ E +G+ I T N +++ + ++ K+L +M
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 393 SGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTE 452
G + +NSL+ + N + + I +++ +G+ PD +Y ++ +C+ M E
Sbjct: 590 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 649
Query: 453 AKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
A + EMK V TY+ + + F EA V M ++G D+ ++ D
Sbjct: 650 AWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 192/392 (48%), Gaps = 2/392 (0%)
Query: 5 MKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
MK +GL P+ + ++I CR L EA E F E+ G+ PD V Y L+D + K
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKL-AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ A + +M SR P ++TYT++IS + + G + EA +L ++M K ++PD T+T
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
L++G+ A + A RV M AGC PN+ T+ LI G ++ E+
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
P+I T+N+++ ++G E + E + AG + T+ TL+ AY + G D+A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
+ + K ML G+ P + T+N ++ G+ E EK+L+ M PN T++SL+
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 605
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
Y + A+ +++ S + + LV + K + EA F E K +G
Sbjct: 606 YCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVS 665
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESGF 395
++T + ++ + ++K + ++ M G
Sbjct: 666 VSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/512 (22%), Positives = 224/512 (43%), Gaps = 36/512 (7%)
Query: 28 SLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS-RRPKEAMEVLKQMESRGFPPSIVT 86
L EA +FE++ GL + + N L K + A+ V ++ G ++ +
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 87 YTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMR 146
Y +I + G ++EA L M K PDV +Y+T+++G+ + + ++ E M+
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 147 TAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDS 206
G KPN + ++I G+ + K+ +
Sbjct: 309 RKGLKPNSYIYGSII------GLLCRICKL-----------------------------A 333
Query: 207 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVL 266
E F EM R G +P+ + TLI + + G A + M +TPD+ TY A++
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 267 AALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKIT 326
+ + G ++ K+ EM +P+ VT++ L++ Y + + + +
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 327 THAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKI 386
+ V TL+ K L A E K G+ +I T N++++ + + + K+
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 387 LKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCR 446
+ +G Y +LM + ++ K++ IL+E+L KG++P ++++N+++ +C
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 447 NGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNT 506
+G + + +++LN M P+ T+N+ V Y + A + + M +G PD T
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 507 YNSIVDWYCKLHLREEAYNFVHNLSSLDLHVS 538
Y ++V +CK +EA+ + VS
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEMKGKGFSVS 665
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 179/365 (49%), Gaps = 10/365 (2%)
Query: 4 DMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
+M QG+ PD + TLI C+ G + A + F E+ + PD++TY A++ + +
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDI-RAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
EA ++ +M +G P VT+T LI+ Y + G +++A + N M++ P+V TY
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
TTL+ G + A + EM G +PNI T+N+++ G E K+ E +A
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
+ D VT+ TL+ + ++G + + KEM G P TFN L++ + G +
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
+ ML G+ P+ +T+N+++ + + + +M + P+ TY +L+
Sbjct: 580 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 639
Query: 303 AYANGKEFEKMNALAEEI----YSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKR 358
+ + ++ L +E+ +S ++T++VL+K L KF EA F + ++
Sbjct: 640 GHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF-LKRKKF---LEAREVFDQMRRE 695
Query: 359 GIPHD 363
G+ D
Sbjct: 696 GLAAD 700
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 129/229 (56%), Gaps = 2/229 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L +M GL P++ T+N++++ C++G++ EEA++L E + AGL D VTY L+D Y
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNI-EEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
KS +A E+LK+M +G P+IVT+ L++ + G+LE+ +L N M+ K I P+
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
T+ +L+ + + A ++++M + G P+ T+ L+K + E +F+E
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 656
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFN 228
+K S + T++ L+ F + E VF +M+R G ++E F+
Sbjct: 657 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 145/541 (26%), Positives = 247/541 (45%), Gaps = 20/541 (3%)
Query: 2 LMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGK 61
L +M + + PD+ TFN LI+ A +E++ L ++++ +G P +VTYN +L Y K
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYT 121
R K A+E+L M+S+G + TY LI R + + L M ++ I P+ T
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 340
Query: 122 YTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK 181
Y TL++GF N K +A ++ EM + G PN TFNALI + G F E K+F ++
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 400
Query: 182 ACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFD 241
A +P V++ LL +N G + MKR G R T+ +I + G D
Sbjct: 401 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 460
Query: 242 QARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL 301
+A + M + G+ PD+ TY+A++ + G ++ +++++ + PN + YS+L+
Sbjct: 461 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 520
Query: 302 HAYANGKEFEKMNALAE--EIYSGKI----TTHAVLLKTLVLVNSKFDFLAEAEHAFLEF 355
+ +M L E IY I T LV K +AEAE
Sbjct: 521 YNCC------RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 574
Query: 356 KKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNF 415
GI + + + +++ YG K + M + G + Y SL+ + +
Sbjct: 575 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 634
Query: 416 RKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTF 475
R++E L+ + D + YN ++ A C++G + +A + EM + +PD TY +
Sbjct: 635 REAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSL 694
Query: 476 VATYAANSMFGEAIGVVQCMIKQG-CKPDQNTYNSIVD-------WYCKLHLREEAYNFV 527
++ AI + +G P++ Y VD W ++ RE+ N
Sbjct: 695 ISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLG 754
Query: 528 H 528
H
Sbjct: 755 H 755
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 116/508 (22%), Positives = 224/508 (44%)
Query: 9 GLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEA 68
G P + T N ++ +E+ + PD+ T+N L++V +++
Sbjct: 193 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 252
Query: 69 MEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSG 128
++++ME G+ P+IVTY +++ Y + G + A+EL + M K + DV TY L+
Sbjct: 253 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHD 312
Query: 129 FVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPD 188
+ + + +MR PN T+N LI + + G ++ E+ + SP+
Sbjct: 313 LCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN 372
Query: 189 IVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYK 248
VT+N L+ G E +F M+ G P ++ L+ + FD AR Y
Sbjct: 373 HVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYM 432
Query: 249 RMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGK 308
RM GV TY ++ L + G +++ +L+EM P+ VTYS+L++ +
Sbjct: 433 RMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVG 492
Query: 309 EFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLN 368
F+ + IY ++ + ++ TL+ + L EA + G D T N
Sbjct: 493 RFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFN 552
Query: 369 AMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEK 428
+++ + VA+ + ++ M G + ++ L+ + + K+ + E+ +
Sbjct: 553 VLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKV 612
Query: 429 GIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEA 488
G P +Y ++ C+ G + EA++ L + D V YNT + + +A
Sbjct: 613 GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKA 672
Query: 489 IGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
+ + M+++ PD TY S++ C+
Sbjct: 673 VSLFGEMVQRSILPDSYTYTSLISGLCR 700
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 146/567 (25%), Positives = 251/567 (44%), Gaps = 36/567 (6%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +M S GL+P+ TFN LI + ++EAL++F ++ GL P V+Y LLD
Sbjct: 360 LLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 419
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K+ A +M+ G +TYT +I ++G L+EA+ L N+M + I PD+
Sbjct: 420 KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIV 479
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY+ L++GF + + A + + G PN ++ LI G E ++++ +
Sbjct: 480 TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAM 539
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ D T+N L+ + G +E + M G +P +F+ LI+ Y G
Sbjct: 540 ILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEG 599
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
+A +V+ M + G P TY ++L L +GG ++EK L + + V Y++L
Sbjct: 600 LKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTL 659
Query: 301 LHAYANGKEFEKMNALAEEIYSGKI-------------------TTHAVL---------- 331
L A K +L E+ I T A+L
Sbjct: 660 LTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGN 719
Query: 332 -LKTLVLVNSKFD--FLAEAEHAFLEFKKR----GIPHDITTLNAMLSLYGRKKLVAKTN 384
L V+ D F A A + F+++ G DI T NAM+ Y R + KTN
Sbjct: 720 VLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTN 779
Query: 385 KILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAY 444
+L M +L YN L++ +S+ ++ S ++ R I+ GI PD ++ + ++
Sbjct: 780 DLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGI 839
Query: 445 CRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQ 504
C + + +IL D T+N ++ AN A +V+ M G D+
Sbjct: 840 CESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDK 899
Query: 505 NTYNSIVDWYCKLHLREEAYNFVHNLS 531
+T +++V + H +E+ +H +S
Sbjct: 900 DTCDAMVSVLNRNHRFQESRMVLHEMS 926
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 150/586 (25%), Positives = 249/586 (42%), Gaps = 73/586 (12%)
Query: 3 MDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGK 61
M MK G+ T+ +I C+ G L +EA+ L E+ G+ PD+VTY+AL++ + K
Sbjct: 432 MRMKRNGVCVGRITYTGMIDGLCKNGFL-DEAVVLLNEMSKDGIDPDIVTYSALINGFCK 490
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMV-EKH------ 114
R K A E++ ++ G P+ + Y++LI R G L+EA+ + M+ E H
Sbjct: 491 VGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFT 550
Query: 115 ----------------------------IKPDVYTYTTLLSGFVNAKKDELAMRVFEEMR 146
I P+ ++ L++G+ N+ + A VF+EM
Sbjct: 551 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 610
Query: 147 TAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDS 206
G P T+ +L+K G E K K + A + D V +NTLL ++G +
Sbjct: 611 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 670
Query: 207 EVSGVFKEMKRAGFVPERETFNTLISAYSR----------------------------C- 237
+ +F EM + +P+ T+ +LIS R C
Sbjct: 671 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 730
Query: 238 --GSFDQAR---AVYKR--MLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRC 290
G F + +Y R M G TPD+ T NA++ +R G E++ +L EM N
Sbjct: 731 VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG 790
Query: 291 KPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEH 350
PN TY+ LLH Y+ K+ L I I + +LVL + + L
Sbjct: 791 GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLK 850
Query: 351 AFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHS 410
F RG+ D T N ++S + ++K M G +L ++++ + +
Sbjct: 851 ILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLN 910
Query: 411 RTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVV 470
R F++S M+L E+ ++GI P+ Y +I CR G + A + EM P V
Sbjct: 911 RNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNV 970
Query: 471 TYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
+ V A EA +++ M+K P ++ +++ CK
Sbjct: 971 AESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCK 1016
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 143/563 (25%), Positives = 253/563 (44%), Gaps = 48/563 (8%)
Query: 1 MLMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L MKS+G+ D+CT+N LI CR+ + + L L +++ + P+ VTYN L++ +
Sbjct: 290 LLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL-LLRDMRKRMIHPNEVTYNTLINGF 348
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
+ A ++L +M S G P+ VT+ +LI ++ +G +EAL++ M K + P
Sbjct: 349 SNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSE 408
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
+Y LL G + +LA + M+ G T+ +I G E + E
Sbjct: 409 VSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 468
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+ PDIVT++ L+ F + G + + R G P ++TLI R G
Sbjct: 469 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC 528
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
+A +Y+ M+ G T D T+N ++ +L + G ++E+ + M + PN V++
Sbjct: 529 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 588
Query: 300 LLHAYANGKE-------FEKMNALA----------------------------EEIYSGK 324
L++ Y N E F++M + + +++
Sbjct: 589 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 648
Query: 325 ITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTN 384
V+ TL+ K LA+A F E +R I D T +++S RK KT
Sbjct: 649 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK---GKTV 705
Query: 385 KILKFMYESGFTLS-LPGYNSLMYLHSRTRNFR----KSEMILREILEK-GIEPDLISYN 438
+ F E+ + LP N +MY F+ K+ + RE ++ G PD+++ N
Sbjct: 706 IAILFAKEAEARGNVLP--NKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 763
Query: 439 IVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQ 498
+I Y R GK+ + +L EM + P++ TYN + Y+ + + + +I
Sbjct: 764 AMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN 823
Query: 499 GCKPDQNTYNSIVDWYCKLHLRE 521
G PD+ T +S+V C+ ++ E
Sbjct: 824 GILPDKLTCHSLVLGICESNMLE 846
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 115/484 (23%), Positives = 229/484 (47%), Gaps = 2/484 (0%)
Query: 51 TYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQM 110
Y+ L+ VY + ++++E+ + M GF PS+ T +++ + V+ G +M
Sbjct: 165 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 224
Query: 111 VEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMF 170
+++ I PDV T+ L++ E + + ++M +G P I T+N ++ Y +G F
Sbjct: 225 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 284
Query: 171 AEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTL 230
++ +K+ D+ T+N L+ ++ ++ + ++M++ P T+NTL
Sbjct: 285 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 344
Query: 231 ISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRC 290
I+ +S G A + ML G++P+ T+NA++ G ++++ K+ ME
Sbjct: 345 INGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 404
Query: 291 KPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEH 350
P+EV+Y LL EF+ + + + ++ K FL EA
Sbjct: 405 TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 464
Query: 351 AFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHS 410
E K GI DI T +A+++ + + +I+ +Y G + + Y++L+Y
Sbjct: 465 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 524
Query: 411 RTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVV 470
R +++ I ++ +G D ++N+++ + C+ GK+ EA+ + M +P+ V
Sbjct: 525 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 584
Query: 471 TYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK-LHLREEAYNFVHN 529
+++ + Y + +A V M K G P TY S++ CK HLR EA F+ +
Sbjct: 585 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR-EAEKFLKS 643
Query: 530 LSSL 533
L ++
Sbjct: 644 LHAV 647
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 165/374 (44%)
Query: 150 CKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVS 209
C N ++ LI++Y GM + ++F+ + +P + T N +L ++G D V
Sbjct: 159 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 218
Query: 210 GVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAAL 269
KEM + P+ TFN LI+ GSF+++ + ++M ++G P + TYN VL
Sbjct: 219 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 278
Query: 270 ARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHA 329
+ G ++ + ++L M++ + TY+ L+H K L ++ I +
Sbjct: 279 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 338
Query: 330 VLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKF 389
V TL+ S + A E G+ + T NA++ + + + K+
Sbjct: 339 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 398
Query: 390 MYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGK 449
M G T S Y L+ + F + + G+ I+Y +I C+NG
Sbjct: 399 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 458
Query: 450 MTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNS 509
+ EA +LNEM PD+VTY+ + + F A +V + + G P+ Y++
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 518
Query: 510 IVDWYCKLHLREEA 523
++ C++ +EA
Sbjct: 519 LIYNCCRMGCLKEA 532
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 193/433 (44%), Gaps = 12/433 (2%)
Query: 4 DMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
+M + + PD T+ +LIS CR G L E + P+ V Y +D K+
Sbjct: 678 EMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKA 737
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
+ K + +QM++ G P IVT ++I Y R G +E+ +L +M ++ P++ TY
Sbjct: 738 GQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTY 797
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
LL G+ K + ++ + G P+ T ++L+ + M K+ K
Sbjct: 798 NILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFIC 857
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
D T+N L++ NG + + K M G +++T + ++S +R F +
Sbjct: 858 RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQE 917
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
+R V M + G++P+ Y ++ L R G + + V EM + P V S+++
Sbjct: 918 SRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVR 977
Query: 303 AYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPH 362
A A + ++ L + K+ TL+ + K + EA + G+
Sbjct: 978 ALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKL 1037
Query: 363 DITTLNAMLSLYGRKKLVAKTNKILKF-MYE----SGFTLSLPGYNSLMY-LHSRTRNFR 416
D+ + N +++ L AK + L F +YE GF + Y +L+ L +R F
Sbjct: 1038 DLVSYNVLIT-----GLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFS 1092
Query: 417 KSEMILREILEKG 429
+++IL+++L +G
Sbjct: 1093 GADIILKDLLARG 1105
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 105/198 (53%)
Query: 354 EFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTR 413
E KR I D+ T N ++++ + K++ +++ M +SG+ ++ YN++++ + +
Sbjct: 223 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 282
Query: 414 NFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYN 473
F+ + +L + KG++ D+ +YN++I+ CR+ ++ + +L +M+ P+ VTYN
Sbjct: 283 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 342
Query: 474 TFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSL 533
T + ++ A ++ M+ G P+ T+N+++D + +EA + + +
Sbjct: 343 TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAK 402
Query: 534 DLHVSEEEKGRLLERIAE 551
L SE G LL+ + +
Sbjct: 403 GLTPSEVSYGVLLDGLCK 420
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 105/226 (46%), Gaps = 15/226 (6%)
Query: 325 ITTHAV-----------LLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSL 373
ITTH + +LK L L++ K F+ A L R + + + ++ +
Sbjct: 117 ITTHILVRARMYDPARHILKELSLMSGKSSFVFGA----LMTTYRLCNSNPSVYDILIRV 172
Query: 374 YGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPD 433
Y R+ ++ + +I + M GF S+ N+++ ++ L+E+L++ I PD
Sbjct: 173 YLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPD 232
Query: 434 LISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQ 493
+ ++NI+I C G ++ ++ +M+ P +VTYNT + Y F AI ++
Sbjct: 233 VATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLD 292
Query: 494 CMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSE 539
M +G D TYN ++ C+ + + Y + ++ +H +E
Sbjct: 293 HMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 338
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 129/547 (23%), Positives = 257/547 (46%), Gaps = 29/547 (5%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV 71
P + +N L+ C E L++++ L G+ P T+N L+ S A E+
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 72 LKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVN 131
+M +G P+ T+ L+ Y + GL ++ LEL N M + P+ Y T++S F
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 132 AKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ----CSP 187
+++ + ++ E+MR G P+I TFN+ I G + ++F +++ + P
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVY 247
+ +T+N +L F + GL + +F+ ++ + +++N + R G F +A V
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349
Query: 248 KRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEME-NGRCKPNEVTYSSLLHAYAN 306
K+M + G+ P + +YN ++ L + G+ ++ ++ M+ NG C P+ VTY LLH Y +
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVC-PDAVTYGCLLHGYCS 408
Query: 307 GKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITT 366
+ + +L +E+ +A L+ K ++EAE + ++G D T
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVT 468
Query: 367 LNAMLSLYGRKKLVAKTNKILKFM-----------------------YESGFTLSLPGYN 403
N ++ + K +I+K M E+ L Y+
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYS 528
Query: 404 SLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDP 463
+L+ + F +++ + E++ + ++PD ++YNI I+ +C+ GK++ A R+L +M+
Sbjct: 529 TLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKK 588
Query: 464 APVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEA 523
+ TYN+ + + E G++ M ++G P+ TYN+ + + C+ E+A
Sbjct: 589 GCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDA 648
Query: 524 YNFVHNL 530
N + +
Sbjct: 649 TNLLDEM 655
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 214/472 (45%), Gaps = 39/472 (8%)
Query: 89 SLISAYVRDGLLEEALELKNQMVEKHI---KPDVYTYTTLLSGFVNAKKDELAMRVFEEM 145
S++S + + +++A + Q+V KP VY Y LL + ++ E ++++M
Sbjct: 80 SVVSIFAKSNHIDKAFP-QFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDM 138
Query: 146 RTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLD 205
G P TFN LI+ D ++F E+ C P+ T+ L+ + + GL
Sbjct: 139 VLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLT 198
Query: 206 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAV 265
+ + M+ G +P + +NT++S++ R G D + + ++M E G+ PD+ T+N+
Sbjct: 199 DKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSR 258
Query: 266 LAALARGGLWEQSEKVLSEME----NGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIY 321
++AL + G + ++ S+ME G +PN +TY+ +L + E L E I
Sbjct: 259 ISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIR 318
Query: 322 S----GKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRK 377
+ ++ + L+ LV + KF EAE + +GI I + N ++ +
Sbjct: 319 ENDDLASLQSYNIWLQGLVR-HGKF---IEAETVLKQMTDKGIGPSIYSYNILMDGLCKL 374
Query: 378 KLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISY 437
+++ I+ M +G Y L++ + ++ +L+E++ P+ +
Sbjct: 375 GMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTC 434
Query: 438 NIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCM-- 495
NI++++ + G+++EA+ +L +M + D VT N V + +AI +V+ M
Sbjct: 435 NILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRV 494
Query: 496 ---------------------IKQGCKPDQNTYNSIVDWYCKLHLREEAYNF 526
I+ C PD TY+++++ CK EA N
Sbjct: 495 HGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNL 546
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/558 (22%), Positives = 241/558 (43%), Gaps = 30/558 (5%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L M+S G+ P+ +NT++S CR G +++ ++ E+++ GL PD+VT+N+ +
Sbjct: 204 LLNAMESFGVLPNKVIYNTIVSSFCREGR-NDDSEKMVEKMREEGLVPDIVTFNSRISAL 262
Query: 60 GKSRRPKEAMEVLKQMESR---GFP-PSIVTYTSLISAYVRDGLLEEALELKNQMVEKHI 115
K + +A + ME G P P+ +TY ++ + + GLLE+A L + E
Sbjct: 263 CKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDD 322
Query: 116 KPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGK 175
+ +Y L G V K A V ++M G P+I ++N L+ GM ++
Sbjct: 323 LASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKT 382
Query: 176 VFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYS 235
+ +K PD VT+ LL + G + +EM R +P T N L+ +
Sbjct: 383 IVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLW 442
Query: 236 RCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEME--------- 286
+ G +A + ++M E G D T N ++ L G +++ +++ M
Sbjct: 443 KMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGN 502
Query: 287 --------------NGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLL 332
C P+ +TYS+LL+ F + L E+ K+ +V
Sbjct: 503 LGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAY 562
Query: 333 KTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYE 392
+ K ++ A + +K+G + T N+++ G K + + + ++ M E
Sbjct: 563 NIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKE 622
Query: 393 SGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTE 452
G + ++ YN+ + + +L E+++K I P++ S+ +I A+C+
Sbjct: 623 KGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDM 682
Query: 453 AKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
A+ + + + F AA + +A +++ ++ +G + Y +V+
Sbjct: 683 AQEVFETAVSICGQKEGLYSLMFNELLAAGQLL-KATELLEAVLDRGFELGTFLYKDLVE 741
Query: 513 WYCKLHLREEAYNFVHNL 530
CK E A +H +
Sbjct: 742 SLCKKDELEVASGILHKM 759
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 117/529 (22%), Positives = 217/529 (41%), Gaps = 73/529 (13%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLA---GL-RPDMVTYNAL 55
M+ M+ +GL PD+ TFN+ IS C+ G + + A +F +++L GL RP+ +TYN +
Sbjct: 239 MVEKMREEGLVPDIVTFNSRISALCKEGKVLD-ASRIFSDMELDEYLGLPRPNSITYNLM 297
Query: 56 LDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHI 115
L + K ++A + + + S+ +Y + VR G EA + QM +K I
Sbjct: 298 LKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGI 357
Query: 116 KPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGK 175
P +Y+Y L+ G A + M+ G P+ T+ L+ Y G
Sbjct: 358 GPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKS 417
Query: 176 VFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYS 235
+ +E+ C P+ T N LL + G SE + ++M G+ + T N ++
Sbjct: 418 LLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLC 477
Query: 236 RCGSFDQARAVYKRM-----------------------LEAGVTPDLSTYNAVLAALARG 272
G D+A + K M +E PDL TY+ +L L +
Sbjct: 478 GSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKA 537
Query: 273 GLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA-NGK---EFEKMNALAEEIYSGKITTH 328
G + +++ + +EM + +P+ V Y+ +H + GK F + + ++ + T+
Sbjct: 538 GRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETY 597
Query: 329 AVLLKTLVLVNSKFDFLAEAEHAFL-EFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKIL 387
L+ L + N F+ H + E K++GI +I T N + + V +L
Sbjct: 598 NSLILGLGIKNQIFEI-----HGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLL 652
Query: 388 KFMYESGFTLSLPGYNSLMYLHSRTRNFR------------------------------- 416
M + ++ + L+ + +F
Sbjct: 653 DEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAG 712
Query: 417 ---KSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKD 462
K+ +L +L++G E Y ++ + C+ ++ A IL++M D
Sbjct: 713 QLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMID 761
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 112/479 (23%), Positives = 211/479 (44%), Gaps = 42/479 (8%)
Query: 62 SRRPKEAMEVLKQM------ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHI 115
+ P+ A + K++ ES G S+ ++ VR + EE EL N ++ I
Sbjct: 13 TNNPRLAWRIFKRIFSSPSEESHGI--SLDATPTIARILVRAKMHEEIQELHNLILSSSI 70
Query: 116 -KPDVYTYTTLLSGFVNAKKDELAMRVFEEMRT--AGCKPNICTFNALIKMYGDRGMFAE 172
K + + +++S F + + A F+ +R+ KP++ +N L++
Sbjct: 71 QKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEF 130
Query: 173 MGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLIS 232
+ ++K++ C +P T+N L+ + +F EM G P TF L+
Sbjct: 131 VSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVR 190
Query: 233 AYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKP 292
Y + G D+ + M GV P+ YN ++++ R G + SEK++ +M P
Sbjct: 191 GYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVP 250
Query: 293 NEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAF 352
+ VT++S +++AL +E GK+ + + + L +
Sbjct: 251 DIVTFNS------------RISALCKE---GKVLDASRIFSDMEL------------DEY 283
Query: 353 LEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRT 412
L + P+ IT N ML + + L+ + + + E+ SL YN + R
Sbjct: 284 LGLPR---PNSIT-YNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRH 339
Query: 413 RNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTY 472
F ++E +L+++ +KGI P + SYNI++ C+ G +++AK I+ MK PD VTY
Sbjct: 340 GKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTY 399
Query: 473 NTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLS 531
+ Y + A ++Q M++ C P+ T N ++ K+ EA + ++
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMN 458
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 122/266 (45%), Gaps = 9/266 (3%)
Query: 12 PDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAME 70
PDL T++TL++ C+AG + EA LF E+ L+PD V YN + + K + A
Sbjct: 522 PDLITYSTLLNGLCKAGR-FAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFR 580
Query: 71 VLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFV 130
VLK ME +G S+ TY SLI + E L ++M EK I P++ TY T +
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLC 640
Query: 131 NAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFK-EIKACQCSPDI 189
+K E A + +EM PN+ +F LI+ + F +VF+ + C +
Sbjct: 641 EGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL 700
Query: 190 --VTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVY 247
+ +N LLA G + + + + + GF + L+ + + + A +
Sbjct: 701 YSLMFNELLAA----GQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGIL 756
Query: 248 KRMLEAGVTPDLSTYNAVLAALARGG 273
+M++ G D + V+ L + G
Sbjct: 757 HKMIDRGYGFDPAALMPVIDGLGKMG 782
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 101/244 (41%), Gaps = 31/244 (12%)
Query: 291 KPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEH 350
KP+ Y+ LL + + E ++ L +++ I L+ + A
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 351 AFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHS 410
F E ++G + T ++ Y + L K ++L M G + YN+++
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 411 RTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVV 470
R SE ++ ++ E+G+ PD++++N I A C+ GK+ +A RI ++M+
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDME--------- 279
Query: 471 TYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
E +G+ +P+ TYN ++ +CK+ L E+A ++
Sbjct: 280 --------------LDEYLGLP--------RPNSITYNLMLKGFCKVGLLEDAKTLFESI 317
Query: 531 SSLD 534
D
Sbjct: 318 REND 321
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/525 (25%), Positives = 257/525 (48%), Gaps = 12/525 (2%)
Query: 3 MDMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGK 61
M+M + P++ T+N +++ C+ G++ EEA + +I AGL PD TY +L+ Y +
Sbjct: 207 MEMLEDKVCPNIYTYNKMVNGYCKLGNV-EEANQYVSKIVEAGLDPDFFTYTSLIMGYCQ 265
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYT 121
+ A +V +M +G + V YT LI ++EA++L +M + P V T
Sbjct: 266 RKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRT 325
Query: 122 YTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK 181
YT L+ +++ A+ + +EM G KPNI T+ LI + F + ++ ++
Sbjct: 326 YTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQML 385
Query: 182 ACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFD 241
P+++T+N L+ + + G+ + V + M+ P T+N LI Y + +
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVH 444
Query: 242 QARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL 301
+A V +MLE V PD+ TYN+++ R G ++ + ++LS M + P++ TY+S++
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMI 504
Query: 302 HAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLE--FKKRG 359
+ K E+ L + + + + V+ L+ K + EA H LE K
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEA-HLMLEKMLSKNC 563
Query: 360 IPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSE 419
+P+ + T NA++ + + + + M + G ++ L++ + +F +
Sbjct: 564 LPNSL-TFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 420 MILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATY 479
+++L G +PD +Y I YCR G++ +A+ ++ +M++ PD+ TY++ + Y
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY 682
Query: 480 AANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAY 524
A V++ M GC+P Q+T+ S++ HL E Y
Sbjct: 683 GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK-----HLLEMKY 722
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 135/529 (25%), Positives = 243/529 (45%), Gaps = 27/529 (5%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L M +GL P++ T+N LI+ C+ G + E+A+++ E ++ L P+ TYN L+ Y
Sbjct: 380 LLGQMLEKGLMPNVITYNALINGYCKRG-MIEDAVDVVELMESRKLSPNTRTYNELIKGY 438
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
KS K AM VL +M R P +VTY SLI R G + A L + M ++ + PD
Sbjct: 439 CKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQ 497
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
+TYT+++ +K+ E A +F+ + G PN+ + ALI Y G E + ++
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+ + C P+ +T+N L+ +G E + + ++M + G P T LI + G
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGD 617
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
FD A + +++ML +G PD TY + R G +E ++++M P+ TYSS
Sbjct: 618 FDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSS 677
Query: 300 LLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFK--- 356
L+ Y + L + ++ + ++ S+ FL+ +H LE K
Sbjct: 678 LIKGYGD---------LGQTNFAFDVLKR---MRDTGCEPSQHTFLSLIKH-LLEMKYGK 724
Query: 357 KRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFR 416
++G ++ ++ M+ +L+ K M E T + Y L+ N R
Sbjct: 725 QKGSEPELCAMSNMMEFDTVVELLEK-------MVEHSVTPNAKSYEKLILGICEVGNLR 777
Query: 417 KSEMILREILE-KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTF 475
+E + + +GI P + +N ++ C+ K EA +++++M +P + +
Sbjct: 778 VAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVL 837
Query: 476 VATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAY 524
+ V Q +++ G D+ + I+D K L E Y
Sbjct: 838 ICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFY 886
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 122/552 (22%), Positives = 242/552 (43%), Gaps = 26/552 (4%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ + MK P + T+ LI EAL L +E++ G++P++ TY L+D
Sbjct: 310 LFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLC 369
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ ++A E+L QM +G P+++TY +LI+ Y + G++E+A+++ M + + P+
Sbjct: 370 SQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTR 429
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY L+ G+ + + AM V +M P++ T+N+LI G F ++ +
Sbjct: 430 TYNELIKGYCKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM 488
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
PD T+ +++ ++ E +F +++ G P + LI Y + G
Sbjct: 489 NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKV 548
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
D+A + ++ML P+ T+NA++ L G +++ + +M +P T + L
Sbjct: 549 DEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTIL 608
Query: 301 LHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI 360
+H +F+ + +++ S A T + + L +AE + ++ G+
Sbjct: 609 IHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
Query: 361 PHDITTLNAMLSLYGRKKLVAKTN---KILKFMYESGFTLSLPGYNSL------------ 405
D+ T ++++ YG + +TN +LK M ++G S + SL
Sbjct: 669 SPDLFTYSSLIKGYGD---LGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQ 725
Query: 406 ------MYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNE 459
+ S F +L +++E + P+ SY +I C G + A+++ +
Sbjct: 726 KGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDH 785
Query: 460 M-KDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLH 518
M ++ P + +N ++ EA VV MI G P + ++ K
Sbjct: 786 MQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKG 845
Query: 519 LREEAYNFVHNL 530
+E + NL
Sbjct: 846 EKERGTSVFQNL 857
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 217/477 (45%), Gaps = 22/477 (4%)
Query: 5 MKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M+S+ L+P+ T+N LI C++ +A+ + ++ + PD+VTYN+L+D +S
Sbjct: 419 MESRKLSPNTRTYNELIKGYCKSN--VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSG 476
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
A +L M RG P TYTS+I + + +EEA +L + + +K + P+V YT
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYT 536
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
L+ G+ A K + A + E+M + C PN TFNALI G E + +++
Sbjct: 537 ALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
P + T L+ ++G F++M +G P+ T+ T I Y R G A
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL--- 300
+ +M E GV+PDL TY++++ G + VL M + C+P++ T+ SL
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKH 716
Query: 301 ---------------LHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFL 345
L A +N EF+ + L E++ +T +A + L+L + L
Sbjct: 717 LLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNL 776
Query: 346 AEAEHAFLEFKK-RGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNS 404
AE F ++ GI NA+LS + K + K++ M G L
Sbjct: 777 RVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKV 836
Query: 405 LMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMK 461
L+ + + + + +L+ G D +++ I+I + G + + N M+
Sbjct: 837 LICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVME 893
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 185/425 (43%), Gaps = 45/425 (10%)
Query: 101 EEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNAL 160
+E ELK +++ + Y TLL+ + +V+ EM PNI T+N +
Sbjct: 172 DERFELKYKLI-------IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKM 224
Query: 161 IKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQ-NGLDSEVSGVFKEMKRAG 219
+ Y G E + +I PD T+ +L+ + Q LDS VF EM G
Sbjct: 225 VNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFK-VFNEMPLKG 283
Query: 220 FVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSE 279
+ LI D+A ++ +M + P + TY ++ +L ++
Sbjct: 284 CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEAL 343
Query: 280 KVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVN 339
++ EME KPN TY+ L+ + + +FEK L ++
Sbjct: 344 NLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQML------------------ 385
Query: 340 SKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSL 399
++G+ ++ T NA+++ Y ++ ++ +++ M + +
Sbjct: 386 -----------------EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNT 428
Query: 400 PGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNE 459
YN L+ + ++ N K+ +L ++LE+ + PD+++YN +I CR+G A R+L+
Sbjct: 429 RTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487
Query: 460 MKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHL 519
M D VPD TY + + + + EA + + ++G P+ Y +++D YCK
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547
Query: 520 REEAY 524
+EA+
Sbjct: 548 VDEAH 552
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
Query: 379 LVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYN 438
L K NK +F E + L + YN+L+ +R + + + E+LE + P++ +YN
Sbjct: 165 LCRKMNKDERF--ELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYN 222
Query: 439 IVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQ 498
++ YC+ G + EA + ++++ + PD TY + + Y A V M +
Sbjct: 223 KMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLK 282
Query: 499 GCKPDQNTYNSIVDWYCKLHLREEAYNF 526
GC+ ++ Y ++ C +EA +
Sbjct: 283 GCRRNEVAYTHLIHGLCVARRIDEAMDL 310
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 132/547 (24%), Positives = 249/547 (45%), Gaps = 17/547 (3%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV 71
P + FN L+S ++ + L E+++ + + TYN L++ + + + A+ +
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 72 LKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVN 131
L +M G+ PSIVT +SL++ Y + +A+ L +QMVE +PD T+TTL+ G
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 132 AKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVT 191
K A+ + + M GC+PN+ T+ ++ RG + +++A + D+V
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 192 WNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRML 251
+NT++ + + +FKEM+ G P T+++LIS G + A + M+
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 252 EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE 311
E + P+L T+NA++ A + G + ++EK+ +M P+ TY+SL++ + +
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 312 KMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAML 371
K + E + S V TL+ K + + F E RG+ D T ++
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 372 SLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIE 431
K+ K M G + Y+ L+ K+ + + + I+
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502
Query: 432 PDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGV 491
D+ Y +I C+ GK+ + + + P+VVTYNT ++ + + EA +
Sbjct: 503 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 562
Query: 492 VQCMIKQGCKPDQNTYNSIVDWYCKLHLRE-------------EAYNFVHNLSSLDLHVS 538
++ M + G P+ TYN+++ + HLR+ + FV + S++ L +
Sbjct: 563 LKKMKEDGPLPNSGTYNTLI----RAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 618
Query: 539 EEEKGRL 545
GRL
Sbjct: 619 MLHDGRL 625
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 199/421 (47%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M G PD TF TLI + EA+ L + + G +P++VTY +++ K
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
A+ +L +ME+ +V + ++I + + +++AL L +M K I+P+V TY++
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
L+S + + A ++ +M PN+ TFNALI + G F E K++ ++
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
PDI T+N+L+ F + + +F+ M P+ T+NTLI + + +
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
+++ M G+ D TY ++ L G + ++KV +M + P+ +TYS LL
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 305 ANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDI 364
N + EK + + + +I + T++ K + + F +G+ ++
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 540
Query: 365 TTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILRE 424
T N M+S K+L+ + +LK M E G + YN+L+ H R + S ++RE
Sbjct: 541 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIRE 600
Query: 425 I 425
+
Sbjct: 601 M 601
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 174/321 (54%), Gaps = 2/321 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L M++ + D+ FNT+I S C+ + ++AL LF+E++ G+RP++VTY++L+
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHV-DDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
R +A ++L M + P++VT+ +LI A+V++G EA +L + M+++ I PD+
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
+TY +L++GF + + A ++FE M + C P++ T+N LIK + + ++F+E
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+ D VT+ TL+ +G VFK+M G P+ T++ L+ G
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
++A V+ M ++ + D+ Y ++ + + G + + + KPN VTY++
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545
Query: 300 LLHAYANGKEFEKMNALAEEI 320
++ + + ++ AL +++
Sbjct: 546 MISGLCSKRLLQEAYALLKKM 566
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 202/455 (44%), Gaps = 3/455 (0%)
Query: 77 SRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDE 136
R F Y ++ + D L++A+ L MV+ P + + LLS KK +
Sbjct: 43 GRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFD 102
Query: 137 LAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLL 196
+ + + E+M+ + T+N LI + R + + ++ P IVT ++LL
Sbjct: 103 VVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 197 AVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVT 256
+ S+ + +M G+ P+ TF TLI +A A+ RM++ G
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 257 PDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNAL 316
P+L TY V+ L + G + + +L++ME + + + V +++++ + + + L
Sbjct: 223 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 282
Query: 317 AEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGR 376
+E+ + I + V +L+ + ++A + ++ I ++ T NA++ + +
Sbjct: 283 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 342
Query: 377 KKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLIS 436
+ + K+ M + + YNSL+ K++ + ++ K PD+++
Sbjct: 343 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 402
Query: 437 YNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMI 496
YN +I +C++ ++ + + EM V D VTY T + + A V + M+
Sbjct: 403 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462
Query: 497 KQGCKPDQNTYNSIVDWYC---KLHLREEAYNFVH 528
G PD TY+ ++D C KL E ++++
Sbjct: 463 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 497
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 140/280 (50%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
DM + + PD+ T+N+L++ ++A ++FE + PD+VTYN L+ + KS+
Sbjct: 355 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
R ++ E+ ++M RG VTYT+LI DG + A ++ QMV + PD+ TY+
Sbjct: 415 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 474
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
LL G N K E A+ VF+ M+ + K +I + +I+ G + +F +
Sbjct: 475 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 534
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
P++VT+NT+++ L E + K+MK G +P T+NTLI A+ R G +
Sbjct: 535 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAAS 594
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLS 283
+ + M D ST V L G L + +LS
Sbjct: 595 AELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDMLS 634
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 105/205 (51%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ +M +GL D T+ TLI + A ++F+++ G+ PD++TY+ LLD
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ + ++A+EV M+ I YT++I + G +++ +L + K +KP+V
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY T++SG + + + A + ++M+ G PN T+N LI+ + G A ++ +E+
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLD 205
++C+ D T + + LD
Sbjct: 602 RSCRFVGDASTIGLVANMLHDGRLD 626
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/502 (24%), Positives = 240/502 (47%), Gaps = 1/502 (0%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
+KS+ L P + FN L+S ++ + L E+++ G+ ++ TYN L++ + + +
Sbjct: 77 VKSRPL-PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 135
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
A+ +L +M G+ PSIVT +SL++ Y + +A+ L +QMVE +PD T+TT
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
L+ G K A+ + + M GC+PN+ T+ ++ RG + +++A +
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 255
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
++V ++T++ + + + +F EM+ G P T+++LIS + A
Sbjct: 256 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDAS 315
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
+ M+E + P++ T+NA++ A + G ++EK+ EM P+ TYSSL++ +
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 305 ANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDI 364
++ + E + S + V TL+ K + E F E +RG+ +
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Query: 365 TTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILRE 424
T ++ + + + + K M G ++ YN+L+ + K+ ++
Sbjct: 436 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Query: 425 ILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSM 484
+ +EP + +YNI+I C+ GK+ + + + PDV+ YNT ++ + +
Sbjct: 496 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGL 555
Query: 485 FGEAIGVVQCMIKQGCKPDQNT 506
EA + + M + G PD T
Sbjct: 556 KEEADALFRKMREDGPLPDSGT 577
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/494 (21%), Positives = 238/494 (48%), Gaps = 2/494 (0%)
Query: 31 EEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSL 90
++A+ LF + + P + +N LL K ++ + + ++M+ G ++ TY L
Sbjct: 67 DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNIL 126
Query: 91 ISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
I+ + R + AL L +M++ +P + T ++LL+G+ + K+ A+ + ++M G
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
+P+ TF LI +E + + C P++VT+ ++ + G
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
+ +M+ A ++T+I + + D A ++ M GV P++ TY+++++ L
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAV 330
W + ++LS+M + PN VT+++L+ A+ + + L +E+ I
Sbjct: 307 NYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 366
Query: 331 LLKTLVLVNSKFDFLAEAEHAF-LEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKF 389
+L+ D L EA+H F L K P ++ T N +++ + + K + + ++ +
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFELMISKDCFP-NVVTYNTLINGFCKAKRIDEGVELFRE 425
Query: 390 MYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGK 449
M + G + Y +L++ + R+ ++M+ ++++ G+ P++++YN ++ C+NGK
Sbjct: 426 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 485
Query: 450 MTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNS 509
+ +A + ++ P + TYN + + + + +G KPD YN+
Sbjct: 486 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNT 545
Query: 510 IVDWYCKLHLREEA 523
++ +C+ L+EEA
Sbjct: 546 MISGFCRKGLKEEA 559
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 100/468 (21%), Positives = 217/468 (46%), Gaps = 35/468 (7%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L M G P + T ++L++ G +A+ L +++ G RPD +T+ L+
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ EA+ ++ +M RG P++VTY +++ + G ++ A L N+M I+ +V
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVV 261
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
Y+T++ + ++ A+ +F EM G +PN+ T+++LI + +++ ++ ++
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ +P++VT+N L+ F + G E ++ EM + P+ T+++LI+ +
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
D+A+ +++ M+ P++ TYN ++ + ++ ++ EM N VTY++L
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 301 LHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI 360
+H + ++ + A+ F + G+
Sbjct: 442 IHGFFQARDCD-----------------------------------NAQMVFKQMVSDGV 466
Query: 361 PHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEM 420
+I T N +L + + K + +++ S ++ YN ++ +
Sbjct: 467 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 526
Query: 421 ILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPD 468
+ + KG++PD+I YN +I +CR G EA + +M++ P+PD
Sbjct: 527 LFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 140/261 (53%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L DM + + P++ TFN LI EA +L++E+ + PD+ TY++L++ +
Sbjct: 317 LLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 376
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
R EA + + M S+ P++VTY +LI+ + + ++E +EL +M ++ + +
Sbjct: 377 MHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTV 436
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TYTTL+ GF A+ + A VF++M + G PNI T+N L+ G + VF+ +
Sbjct: 437 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 496
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ + P I T+N ++ + G + +F + G P+ +NT+IS + R G
Sbjct: 497 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLK 556
Query: 241 DQARAVYKRMLEAGVTPDLST 261
++A A++++M E G PD T
Sbjct: 557 EEADALFRKMREDGPLPDSGT 577
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 193/424 (45%), Gaps = 39/424 (9%)
Query: 95 VRDGL----LEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
+R+GL L++A+ L MV+ P ++ + LLS KK +L + + E+M+ G
Sbjct: 57 LRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGI 116
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
N+ T+N LI + R + + ++ P IVT ++LL + S+
Sbjct: 117 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
+ +M G+ P+ TF TLI +A A+ RM++ G P+L TY V+
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV---- 232
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAV 330
NG CK ++ + F +N + + KI + V
Sbjct: 233 ----------------NGLCKRGDIDLA-----------FNLLNKME----AAKIEANVV 261
Query: 331 LLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFM 390
+ T++ K+ +A + F E + +G+ ++ T ++++S + + +++L M
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321
Query: 391 YESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKM 450
E ++ +N+L+ + ++E + E++++ I+PD+ +Y+ +I +C + ++
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381
Query: 451 TEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSI 510
EAK + M P+VVTYNT + + E + + + M ++G + TY ++
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 511 VDWY 514
+ +
Sbjct: 442 IHGF 445
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 90/177 (50%), Gaps = 1/177 (0%)
Query: 356 KKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNF 415
K R +P I N +LS + K + + M G + +L YN L+ R
Sbjct: 78 KSRPLP-SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 136
Query: 416 RKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTF 475
+ +L ++++ G EP +++ + ++ YC ++++A ++++M + PD +T+ T
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 196
Query: 476 VATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSS 532
+ ++ EA+ +V M+++GC+P+ TY +V+ CK + A+N ++ + +
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 253
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 132/557 (23%), Positives = 260/557 (46%), Gaps = 21/557 (3%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
DM P + F+ L+S + ++ + L E+++ G+ ++ TY+ L++ + +
Sbjct: 71 DMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRS 130
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ A+ VL +M G+ P IVT SL++ + + +A+ L QMVE +PD +T+
Sbjct: 131 QLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFN 190
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
TL+ G + A+ + + M GC+P++ T+ ++ RG + K+++
Sbjct: 191 TLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQG 250
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
+ P +V +NT++ ++ +F EM G P T+N+LI G + A
Sbjct: 251 KIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA 310
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
+ M+E + P++ T++A++ A + G ++EK+ EM P+ TYSSL++
Sbjct: 311 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 370
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
+ ++ + E + S + V TL+ K + E F E +RG+ +
Sbjct: 371 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGN 430
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFR-KSEMIL 422
T ++ + + + + K M G + Y+ L L N + ++ +++
Sbjct: 431 TVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSIL--LDGLCNNGKVETALVV 488
Query: 423 REILEKG-IEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAA 481
E L++ +EPD+ +YNI+I C+ GK+ + + + P+VVTY T ++ +
Sbjct: 489 FEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548
Query: 482 NSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLRE-------------EAYNFVH 528
+ EA + + M ++G PD TYN+++ + HLR+ + FV
Sbjct: 549 KGLKEEADALFREMKEEGPLPDSGTYNTLI----RAHLRDGDKAASAELIREMRSCRFVG 604
Query: 529 NLSSLDLHVSEEEKGRL 545
+ S++ L + GRL
Sbjct: 605 DASTIGLVTNMLHDGRL 621
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/494 (23%), Positives = 240/494 (48%), Gaps = 2/494 (0%)
Query: 31 EEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSL 90
++A+ LF ++ + P +V ++ LL K + + + +QM++ G ++ TY+ L
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 91 ISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
I+ + R L AL + +M++ +PD+ T +LL+GF + + A+ + +M G
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
+P+ TFN LI +E + + C PD+VT+ ++ + G
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
+ K+M++ P +NT+I A + + A ++ M G+ P++ TYN+++ L
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAV 330
G W + ++LS+M + PN VT+S+L+ A+ + + L +E+ I
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362
Query: 331 LLKTLVLVNSKFDFLAEAEHAF-LEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKF 389
+L+ D L EA+H F L K P ++ T N ++ + + K V + ++ +
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFP-NVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 390 MYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGK 449
M + G + Y +L++ + R ++++ ++++ G+ PD+++Y+I++ C NGK
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 450 MTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNS 509
+ A + ++ PD+ TYN + + + + +G KP+ TY +
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 510 IVDWYCKLHLREEA 523
++ +C+ L+EEA
Sbjct: 542 MMSGFCRKGLKEEA 555
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/476 (24%), Positives = 233/476 (48%), Gaps = 10/476 (2%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L M G PD+ T N+L++ G+ +A+ L ++ G +PD T+N L+
Sbjct: 138 VLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLF 197
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ R EA+ ++ +M +G P +VTY +++ + G ++ AL L +M + I+P V
Sbjct: 198 RHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVV 257
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
Y T++ N K A+ +F EM G +PN+ T+N+LI+ + G +++ ++ ++
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ +P++VT++ L+ F + G E ++ EM + P+ T+++LI+ +
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
D+A+ +++ M+ P++ TYN ++ + ++ ++ EM N VTY++L
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 301 LHAYANGKEFEKMNALAEEIYSG----KITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFK 356
+H + +E + + +++ S I T+++LL L N K E E+
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC-NNGK----VETALVVFEYL 492
Query: 357 KRG-IPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNF 415
+R + DI T N M+ + V + + G ++ Y ++M R
Sbjct: 493 QRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK 552
Query: 416 RKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVT 471
+++ + RE+ E+G PD +YN +I A+ R+G + ++ EM+ V D T
Sbjct: 553 EEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 608
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 197/438 (44%)
Query: 78 RGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDEL 137
R F Y + + D L++A+ L MV+ P + ++ LLS K +L
Sbjct: 40 RDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDL 99
Query: 138 AMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLA 197
+ + E+M+ G N+ T++ LI + R + V ++ PDIVT N+LL
Sbjct: 100 VISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLN 159
Query: 198 VFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTP 257
F S+ + +M G+ P+ TFNTLI R +A A+ RM+ G P
Sbjct: 160 GFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQP 219
Query: 258 DLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALA 317
DL TY V+ L + G + + +L +ME G+ +P V Y++++ A N K L
Sbjct: 220 DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLF 279
Query: 318 EEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRK 377
E+ + I + V +L+ + ++A + +R I ++ T +A++ + ++
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Query: 378 KLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISY 437
+ + K+ M + + Y+SL+ +++ + ++ K P++++Y
Sbjct: 340 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 399
Query: 438 NIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIK 497
N +I +C+ ++ E + EM V + VTY T + + A V + M+
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459
Query: 498 QGCKPDQNTYNSIVDWYC 515
G PD TY+ ++D C
Sbjct: 460 DGVLPDIMTYSILLDGLC 477
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 147/280 (52%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M + + PD+ T+++LI+ +EA +FE + P++VTYN L+ + K++
Sbjct: 351 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
R E ME+ ++M RG + VTYT+LI + + + A + QMV + PD+ TY+
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYS 470
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
LL G N K E A+ VFE ++ + +P+I T+N +I+ G + +F +
Sbjct: 471 ILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 530
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
P++VT+ T+++ F + GL E +F+EMK G +P+ T+NTLI A+ R G +
Sbjct: 531 GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAAS 590
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLS 283
+ + M D ST V L G L + K+LS
Sbjct: 591 AELIREMRSCRFVGDASTIGLVTNMLHDGRLDKSFLKMLS 630
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 123/521 (23%), Positives = 243/521 (46%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV 71
P + F+ L+S + ++ + L E+++ G+ + TY+ L++ + + + A+ V
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 72 LKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVN 131
L +M G+ P+IVT +SL++ Y + EA+ L +QM +P+ T+ TL+ G
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 132 AKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVT 191
K AM + + M GC+P++ T+ ++ RG + +++ + P ++
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 192 WNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRML 251
+NT++ + + +FKEM+ G P T+++LIS G + A + M+
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 252 EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE 311
E + PD+ T++A++ A + G ++EK+ EM P+ VTYSSL++ + +
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 312 KMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAML 371
+ + E + S V TL+ K+ + E F E +RG+ + T N ++
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 372 SLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIE 431
+ +I K M G ++ YN+L+ + K+ ++ + +E
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 432 PDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGV 491
P + +YNI+I C+ GK+ + + + PDVV YNT ++ + EA +
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 492 VQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSS 532
+ M + G P+ YN+++ + RE + + + S
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 599
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 118/495 (23%), Positives = 242/495 (48%), Gaps = 4/495 (0%)
Query: 31 EEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSL 90
++A+ LF E+ + P ++ ++ LL K + + + +QM++ G P + TY+ L
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 91 ISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
I+ + R L AL + +M++ +P++ T ++LL+G+ ++K+ A+ + ++M G
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
+PN TFN LI +E + + A C PD+VT+ ++ + G
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
+ +M++ P +NT+I + D A ++K M G+ P++ TY+++++ L
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAV 330
G W + ++LS+M + P+ T+S+L+ A+ + + L +E+ I V
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Query: 331 LLKTLVLVNSKFDFLAEAEHAFLEF--KKRGIPHDITTLNAMLSLYGRKKLVAKTNKILK 388
+L+ D L EA+ F EF K P D+ T N ++ + + K V + ++ +
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMF-EFMVSKHCFP-DVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 389 FMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNG 448
M + G + YN L+ + + ++ I +E++ G+ P++++YN ++ C+NG
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Query: 449 KMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYN 508
K+ +A + ++ P + TYN + + + + +G KPD YN
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540
Query: 509 SIVDWYCKLHLREEA 523
+++ +C+ +EEA
Sbjct: 541 TMISGFCRKGSKEEA 555
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 116/477 (24%), Positives = 231/477 (48%), Gaps = 10/477 (2%)
Query: 5 MKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M++ G+ + T++ LI+C CR L AL + ++ G P++VT ++LL+ Y S+
Sbjct: 107 MQNLGIPHNHYTYSILINCFCRRSQL-PLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSK 165
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
R EA+ ++ QM G+ P+ VT+ +LI EA+ L ++MV K +PD+ TY
Sbjct: 166 RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYG 225
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
+++G +LA + +M +P + +N +I + +FKE++
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 285
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
P++VT+++L++ G S+ S + +M P+ TF+ LI A+ + G +A
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
+Y M++ + P + TY++++ ++++++ M + C P+ VTY++L+
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 405
Query: 304 YANGKEFEK----MNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRG 359
+ K E+ +++ G T+ +L++ L A+ F E G
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD----CDMAQEIFKEMVSDG 461
Query: 360 IPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSE 419
+P +I T N +L + + K + +++ S ++ YN ++ +
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521
Query: 420 MILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFV 476
+ + KG++PD+++YN +I +CR G EA + EMK+ +P+ YNT +
Sbjct: 522 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 206/437 (47%), Gaps = 37/437 (8%)
Query: 5 MKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M ++G PDL T+ +++ C+ G + A L +++ L P ++ YN ++D K +
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDT-DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK 270
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+A+ + K+ME++G P++VTY+SLIS G +A L + M+E+ I PDV+T++
Sbjct: 271 HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFS 330
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
L+ FV K A ++++EM P+I T+++LI + E ++F+ + +
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 390
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
C PD+VT+NTL+ F + E VF+EM + G V T+N LI + G D A
Sbjct: 391 HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMA 450
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
+ ++K M+ GV P++ TYN +L L + G E++ V ++ + +P TY+ ++
Sbjct: 451 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 510
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
+ E + F +G+ D
Sbjct: 511 MCKAGKVE-----------------------------------DGWDLFCNLSLKGVKPD 535
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILR 423
+ N M+S + RK + + + K M E G + YN+L+ R + S +++
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 595
Query: 424 EILEKGIEPDLISYNIV 440
E+ G D + +V
Sbjct: 596 EMRSCGFAGDASTIGLV 612
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 172/323 (53%), Gaps = 2/323 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+ +M+++G+ P++ T+++LISC C G + +A L ++ + PD+ T++AL+D +
Sbjct: 278 LFKEMETKGIRPNVVTYSSLISCLCNYGR-WSDASRLLSDMIERKINPDVFTFSALIDAF 336
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
K + EA ++ +M R PSIVTY+SLI+ + L+EA ++ MV KH PDV
Sbjct: 337 VKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDV 396
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TY TL+ GF K+ E M VF EM G N T+N LI+ G ++FKE
Sbjct: 397 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 456
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+ + P+I+T+NTLL +NG + VF+ ++R+ P T+N +I + G
Sbjct: 457 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
+ ++ + GV PD+ YN +++ R G E+++ + EM+ PN Y++
Sbjct: 517 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNT 576
Query: 300 LLHAYANGKEFEKMNALAEEIYS 322
L+ A + E L +E+ S
Sbjct: 577 LIRARLRDGDREASAELIKEMRS 599
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 215/466 (46%), Gaps = 2/466 (0%)
Query: 67 EAMEVLKQM-ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTL 125
+A+ + +M +SR FP SI+ ++ L+SA + + + L QM I + YTY+ L
Sbjct: 64 DAVALFGEMVKSRPFP-SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 126 LSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQC 185
++ F + LA+ V +M G +PNI T ++L+ Y +E + ++
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
P+ VT+NTL+ + SE + M G P+ T+ +++ + G D A
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA 305
+ +M + + P + YN ++ L + + + + EME +PN VTYSSL+
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 306 NGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDIT 365
N + + L ++ KI L+ K L EAE + E KR I I
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Query: 366 TLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREI 425
T +++++ + + + ++ +FM + YN+L+ + + + + RE+
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Query: 426 LEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMF 485
++G+ + ++YNI+I + G A+ I EM P+++TYNT + N
Sbjct: 423 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482
Query: 486 GEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLS 531
+A+ V + + + +P TYN +++ CK E+ ++ NLS
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 170/320 (53%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L M+ L P + +NT+I ++AL LF+E++ G+RP++VTY++L+
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
R +A +L M R P + T+++LI A+V++G L EA +L ++MV++ I P +
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY++L++GF + + A ++FE M + C P++ T+N LIK + E +VF+E+
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ VT+N L+ Q G +FKEM G P T+NTL+ + G
Sbjct: 423 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
++A V++ + + + P + TYN ++ + + G E + + KP+ V Y+++
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 542
Query: 301 LHAYANGKEFEKMNALAEEI 320
+ + E+ +AL +E+
Sbjct: 543 ISGFCRKGSKEEADALFKEM 562
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 141/280 (50%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M + + P + T+++LI+ +EA ++FE + PD+VTYN L+ + K +
Sbjct: 351 EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 410
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
R +E MEV ++M RG + VTY LI + G + A E+ +MV + P++ TY
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
TLL G K E AM VFE ++ + +P I T+N +I+ G + +F +
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 530
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
PD+V +NT+++ F + G E +FKEMK G +P +NTLI A R G + +
Sbjct: 531 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLS 283
+ K M G D ST V L G L + +LS
Sbjct: 591 AELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDMLS 630
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 191/447 (42%), Gaps = 80/447 (17%)
Query: 96 RDGL----LEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCK 151
R+GL L++A+ L +MV+ P + ++ LLS K ++ + + E+M+ G
Sbjct: 54 RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 152 PNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGV 211
N T++ LI + R V ++ P+IVT ++LL + + SE +
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 212 FKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALAR 271
+M G+ P TFNTLI +A A+ RM+ G PDL TY V+
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV----- 228
Query: 272 GGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVL 331
NG CK + + F +N + + GK+ ++
Sbjct: 229 ---------------NGLCKRGDTDLA-----------FNLLNKMEQ----GKLEPGVLI 258
Query: 332 LKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSL---YGRKKLVAKTNKILK 388
T++ K+ + +A + F E + +GI ++ T ++++S YGR
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR------------ 306
Query: 389 FMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNG 448
+ + +L +++E+ I PD+ +++ +I A+ + G
Sbjct: 307 --------------------------WSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340
Query: 449 KMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYN 508
K+ EA+++ +EM + P +VTY++ + + + EA + + M+ + C PD TYN
Sbjct: 341 KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYN 400
Query: 509 SIVDWYCKLHLREEAYNFVHNLSSLDL 535
+++ +CK EE +S L
Sbjct: 401 TLIKGFCKYKRVEEGMEVFREMSQRGL 427
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 129/518 (24%), Positives = 236/518 (45%), Gaps = 39/518 (7%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVL 72
D+ + N L R G L EE + E + G PD++ L+ + + + ++A ++L
Sbjct: 102 DVESNNHLRQMVRTGEL-EEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKIL 160
Query: 73 KQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNA 132
+ +E G P ++TY +IS Y + G + AL + ++M + PDV TY T+L ++
Sbjct: 161 EILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDS 217
Query: 133 KKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTW 192
K + AM V + M C P++ T+ LI+ K+ E++ C+PD+VT+
Sbjct: 218 GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTY 277
Query: 193 NTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLE 252
N L+ + G E +M +G P T N ++ + G + A + ML
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 337
Query: 253 AGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEK 312
G +P + T+N ++ L R GL ++ +L +M C+PN ++Y+ LLH + K+ ++
Sbjct: 338 KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDR 397
Query: 313 MNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLS 372
E + S RG DI T N ML+
Sbjct: 398 AIEYLERMVS-----------------------------------RGCYPDIVTYNTMLT 422
Query: 373 LYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEP 432
+ V +IL + G + L YN+++ ++ K+ +L E+ K ++P
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 433 DLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVV 492
D I+Y+ ++ R GK+ EA + +E + P+ VT+N+ + + AI +
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL 542
Query: 493 QCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
MI +GCKP++ +Y +++ + +EA ++ L
Sbjct: 543 VFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 226/458 (49%), Gaps = 42/458 (9%)
Query: 5 MKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
++ G PD+ T+N +IS C+AG + AL + + + ++ PD+VTYN +L S
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEI-NNALSVLDRMSVS---PDVVTYNTILRSLCDSG 218
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ K+AMEVL +M R P ++TYT LI A RD + A++L ++M ++ PDV TY
Sbjct: 219 KLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYN 278
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
L++G + + A++ +M ++GC+PN+ T N +++ G + + K+ ++
Sbjct: 279 VLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK 338
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
SP +VT+N L+ + GL + ++M + G P ++N L+ + + D+A
Sbjct: 339 GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRA 398
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
+RM+ G PD+ TYN +L AL + G E + ++L+++ + C P +TY++++
Sbjct: 399 IEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDG 458
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI-PH 362
A + K L +E+ + + + +LV S+ + EA F EF++ GI P+
Sbjct: 459 LAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPN 518
Query: 363 DITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMIL 422
+T +NS+M ++R ++ L
Sbjct: 519 AVT------------------------------------FNSIMLGLCKSRQTDRAIDFL 542
Query: 423 REILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEM 460
++ +G +P+ SY I+I G EA +LNE+
Sbjct: 543 VFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/442 (25%), Positives = 199/442 (45%), Gaps = 38/442 (8%)
Query: 95 VRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNI 154
VR G LEE + MV PD+ TTL+ GF K A ++ E + +G P++
Sbjct: 113 VRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDV 172
Query: 155 CTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKE 214
T+N +I Y G E+ + SPD+VT+NT+L +G + V
Sbjct: 173 ITYNVMISGYCKAG---EINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 215 MKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGL 274
M + P+ T+ LI A R A + M + G TPD+ TYN ++ + + G
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 275 WEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKT 334
+++ K L++M + C+PN + TH ++L++
Sbjct: 290 LDEAIKFLNDMPSSGCQPN-------------------------------VITHNIILRS 318
Query: 335 LVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESG 394
+ D AE + ++G + T N +++ RK L+ + IL+ M + G
Sbjct: 319 MCSTGRWMD----AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374
Query: 395 FTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAK 454
+ YN L++ + + ++ L ++ +G PD+++YN ++ A C++GK+ +A
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434
Query: 455 RILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWY 514
ILN++ P ++TYNT + A G+AI ++ M + KPD TY+S+V
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Query: 515 CKLHLREEAYNFVHNLSSLDLH 536
+ +EA F H + +
Sbjct: 495 SREGKVDEAIKFFHEFERMGIR 516
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 166/306 (54%), Gaps = 2/306 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L +M+ +G PD+ T+N L++ C+ G L +EA++ ++ +G +P+++T+N +L
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRL-DEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
+ R +A ++L M +GF PS+VT+ LI+ R GLL A+++ +M + +P+
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
+Y LL GF KK + A+ E M + GC P+I T+N ++ G + ++ +
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+ + CSP ++T+NT++ + G + + EM+ P+ T+++L+ SR G
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
D+A + G+ P+ T+N+++ L + +++ L M N CKPNE +Y+
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559
Query: 300 LLHAYA 305
L+ A
Sbjct: 560 LIEGLA 565
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 138/316 (43%), Gaps = 5/316 (1%)
Query: 218 AGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQ 277
+ F E N + R G ++ + M+ G PD+ ++ R G +
Sbjct: 96 SSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRK 155
Query: 278 SEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEK-MNALAEEIYSGKITTHAVLLKTLV 336
+ K+L +E P+ +TY+ ++ Y E ++ L S + T+ +L++L
Sbjct: 156 AAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLC 215
Query: 337 LVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFT 396
L +A +R D+ T ++ R V K+L M + G T
Sbjct: 216 DSGK----LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCT 271
Query: 397 LSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRI 456
+ YN L+ + ++ L ++ G +P++I++NI++ + C G+ +A+++
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331
Query: 457 LNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
L +M P VVT+N + + G AI +++ M + GC+P+ +YN ++ +CK
Sbjct: 332 LADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391
Query: 517 LHLREEAYNFVHNLSS 532
+ A ++ + S
Sbjct: 392 EKKMDRAIEYLERMVS 407
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 69/115 (60%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +M+++ L PD T+++L+ +EA++ F E + G+RP+ VT+N+++
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHI 115
KSR+ A++ L M +RG P+ +YT LI +G+ +EALEL N++ K +
Sbjct: 531 KSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 76/149 (51%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L + S+G +P L T+NT+I +A++L +E++ L+PD +TY++L+
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ + EA++ + E G P+ VT+ S++ + + A++ M+ + KP+
Sbjct: 496 REGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNET 555
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAG 149
+YT L+ G + A+ + E+ G
Sbjct: 556 SYTILIEGLAYEGMAKEALELLNELCNKG 584
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 128/506 (25%), Positives = 235/506 (46%), Gaps = 38/506 (7%)
Query: 8 QGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPK 66
+G+ P+L T+N I C+ G L + A+ + + G +PD++TYN L+ K+ + +
Sbjct: 245 RGVLPNLFTYNLFIQGLCQRGEL-DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQ 303
Query: 67 EAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLL 126
EA L +M + G P TY +LI+ Y + G+++ A + V PD +TY +L+
Sbjct: 304 EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLI 363
Query: 127 SGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCS 186
G + + A+ +F E G KPN+ +N LIK ++GM E ++ E+
Sbjct: 364 DGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLI 423
Query: 187 PDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAV 246
P++ T+N L+ + G S+ G+ K M G+ P+ TFN LI YS + A +
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Query: 247 YKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYAN 306
ML+ GV PD+ TYN++L L + +E + M C PN T++ LL +
Sbjct: 484 LDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543
Query: 307 GKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITT 366
++ ++ L EE+ + + AV TL+ F + + A+ F+K + +++
Sbjct: 544 YRKLDEALGLLEEMKNKSVNPDAVTFGTLI---DGFCKNGDLDGAYTLFRKMEEAYKVSS 600
Query: 367 LNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREIL 426
S P YN +++ + N +E + +E++
Sbjct: 601 -------------------------------STPTYNIIIHAFTEKLNVTMAEKLFQEMV 629
Query: 427 EKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFG 486
++ + PD +Y +++ +C+ G + + L EM + +P + T +
Sbjct: 630 DRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVY 689
Query: 487 EAIGVVQCMIKQGCKPDQNTYNSIVD 512
EA G++ M+++G P+ N+I D
Sbjct: 690 EAAGIIHRMVQKGLVPE--AVNTICD 713
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/501 (23%), Positives = 233/501 (46%), Gaps = 2/501 (0%)
Query: 31 EEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSL 90
+EA+ +FE + P + +YNA++ V S +A +V +M RG P + ++T
Sbjct: 93 QEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIR 152
Query: 91 ISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
+ ++ + AL L N M + + +V Y T++ GF +F +M +G
Sbjct: 153 MKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGV 212
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNG-LDSEVS 209
+ TFN L+++ +G E K+ ++ P++ T+N + Q G LD V
Sbjct: 213 SLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVR 272
Query: 210 GVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAAL 269
V +++ G P+ T+N LI + F +A +M+ G+ PD TYN ++A
Sbjct: 273 MVGCLIEQ-GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGY 331
Query: 270 ARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHA 329
+GG+ + +E+++ + P++ TY SL+ + E + AL E I +
Sbjct: 332 CKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV 391
Query: 330 VLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKF 389
+L TL+ S + EA E ++G+ ++ T N +++ + V+ + ++K
Sbjct: 392 ILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKV 451
Query: 390 MYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGK 449
M G+ + +N L++ +S + IL +L+ G++PD+ +YN ++ C+ K
Sbjct: 452 MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSK 511
Query: 450 MTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNS 509
+ M + P++ T+N + + EA+G+++ M + PD T+ +
Sbjct: 512 FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGT 571
Query: 510 IVDWYCKLHLREEAYNFVHNL 530
++D +CK + AY +
Sbjct: 572 LIDGFCKNGDLDGAYTLFRKM 592
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/503 (23%), Positives = 237/503 (47%), Gaps = 12/503 (2%)
Query: 51 TYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQM 110
Y + YG+ + +EA+ V ++M+ P++ +Y +++S V G ++A ++ +M
Sbjct: 78 VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM 137
Query: 111 VEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMF 170
++ I PDVY++T + F + A+R+ M + GC+ N+ + ++ + +
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197
Query: 171 AEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTL 230
AE ++F ++ A S + T+N LL V + G E + ++ + G +P T+N
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257
Query: 231 ISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRC 290
I + G D A + ++E G PD+ TYN ++ L + ++++E L +M N
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
Query: 291 KPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFL---AE 347
+P+ TY++L+ Y G M LAE I + V S D L E
Sbjct: 318 EPDSYTYNTLIAGYCKG----GMVQLAERIVGDAVFNGFV--PDQFTYRSLIDGLCHEGE 371
Query: 348 AEHAFLEFKK---RGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNS 404
A F + +GI ++ N ++ + ++ + ++ M E G + +N
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNI 431
Query: 405 LMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPA 464
L+ + ++ +++ ++ KG PD+ ++NI+I+ Y KM A IL+ M D
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491
Query: 465 PVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAY 524
PDV TYN+ + S F + + + M+++GC P+ T+N +++ C+ +EA
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEAL 551
Query: 525 NFVHNLSSLDLHVSEEEKGRLLE 547
+ + + ++ G L++
Sbjct: 552 GLLEEMKNKSVNPDAVTFGTLID 574
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 128/565 (22%), Positives = 241/565 (42%), Gaps = 79/565 (13%)
Query: 3 MDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
M M+ +G+ PD+ +F + S AL L + G ++V Y ++ + +
Sbjct: 135 MRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEE 194
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
E E+ +M + G + T+ L+ + G ++E +L ++++++ + P+++TY
Sbjct: 195 NFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTY 254
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAE----MGKVFK 178
+ G + + A+R+ + G KP++ T+N LI F E +GK+
Sbjct: 255 NLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVN 314
Query: 179 EIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 238
E PD T+NTL+A + + G+ + + GFVP++ T+ +LI G
Sbjct: 315 E----GLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEG 370
Query: 239 SFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYS 298
++A A++ L G+ P++ YN ++ L+ G+ ++ ++ +EM P T++
Sbjct: 371 ETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFN 430
Query: 299 SLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKR 358
L++ KM G ++ L+K ++ +
Sbjct: 431 ILVNGLC------KM---------GCVSDADGLVKVMI--------------------SK 455
Query: 359 GIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKS 418
G DI T N ++ Y + + +IL M ++G + YNSL+ +T F
Sbjct: 456 GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDV 515
Query: 419 EMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVAT 478
+ ++EKG P+L ++NI++ + CR K+ EA +L EMK+ + PD VT+ T +
Sbjct: 516 METYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDG 575
Query: 479 YAANS------------------------------MFGEAIGVV------QCMIKQGCKP 502
+ N F E + V Q M+ + P
Sbjct: 576 FCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGP 635
Query: 503 DQNTYNSIVDWYCKLHLREEAYNFV 527
D TY +VD +CK Y F+
Sbjct: 636 DGYTYRLMVDGFCKTGNVNLGYKFL 660
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 191 bits (486), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 139/548 (25%), Positives = 249/548 (45%), Gaps = 45/548 (8%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M+ G+AP++ TFNT+I Y+EA E++ G+ P ++TY+ L+ +++R
Sbjct: 286 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 345
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+A VLK+M +GFPP+++ Y +LI +++ G L +A+E+K+ MV K + TY T
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
L+ G+ + + A R+ +EM + G N +F ++I + MF + E+
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
SP TL++ ++G S+ ++ + GFV + T N L+ G D+A
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
+ K +L G D +YN +++ +++ L EM KP+ TYS L+
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 585
Query: 305 ANGKEFE---------KMNALAEEIY--------------------------SGKITTHA 329
N + E K N + ++Y S + +
Sbjct: 586 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 330 VLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKF 389
V+ L+ + L+ A + K +GI + T +++ V + + +
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 390 MYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGK 449
M G ++ Y +L+ + + K E +LRE+ K + P+ I+Y ++I Y R+G
Sbjct: 706 MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGN 765
Query: 450 MTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNS 509
+TEA R+LNEM++ VPD +TY F+ Y EA D+ Y +
Sbjct: 766 VTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK----------GSDEENYAA 815
Query: 510 IVDWYCKL 517
I++ + KL
Sbjct: 816 IIEGWNKL 823
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 215/455 (47%), Gaps = 4/455 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L +M +G P++ +N LI S AGSL +A+E+ + + GL TYN L+ Y
Sbjct: 352 VLKEMTKKGFPPNVIVYNNLIDSFIEAGSL-NKAIEIKDLMVSKGLSLTSSTYNTLIKGY 410
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
K+ + A +LK+M S GF + ++TS+I + + AL +M+ +++ P
Sbjct: 411 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 470
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TTL+SG K A+ ++ + G + T NAL+ + G E ++ KE
Sbjct: 471 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 530
Query: 180 IKACQCSPDIVTWNTLLA-VFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 238
I C D V++NTL++ G+ LD E EM + G P+ T++ LI
Sbjct: 531 ILGRGCVMDRVSYNTLISGCCGKKKLD-EAFMFLDEMVKRGLKPDNYTYSILICGLFNMN 589
Query: 239 SFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYS 298
++A + G+ PD+ TY+ ++ + E+ ++ EM + +PN V Y+
Sbjct: 590 KVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYN 649
Query: 299 SLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKR 358
L+ AY L E++ I+ ++ +L+ S + EA+ F E +
Sbjct: 650 HLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME 709
Query: 359 GIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKS 418
G+ ++ A++ YG+ + K +L+ M+ + Y ++ ++R N ++
Sbjct: 710 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 769
Query: 419 EMILREILEKGIEPDLISYNIVIYAYCRNGKMTEA 453
+L E+ EKGI PD I+Y IY Y + G + EA
Sbjct: 770 SRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 125/538 (23%), Positives = 241/538 (44%), Gaps = 13/538 (2%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
+ ++G+ P T N L++ + +++ E F+ + G+ PD+ + ++ + K +
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGK 275
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+EA+++ +ME G P++VT+ ++I G +EA K +MVE+ ++P + TY+
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFK--EIKA 182
L+ G AK+ A V +EM G PN+ +N LI F E G + K EIK
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS------FIEAGSLNKAIEIKD 389
Query: 183 CQCSPDIV----TWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 238
S + T+NTL+ + +NG + KEM GF + +F ++I
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 449
Query: 239 SFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYS 298
FD A ML ++P +++ L + G ++ ++ + N + T +
Sbjct: 450 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 509
Query: 299 SLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKR 358
+LLH + ++ + +EI V TL+ L EA E KR
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Query: 359 GIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKS 418
G+ D T + ++ V + + +G + Y+ ++ + +
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 419 EMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVAT 478
+ E++ K ++P+ + YN +I AYCR+G+++ A + +MK P+ TY + +
Sbjct: 630 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Query: 479 YAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLH 536
+ S EA + + M +G +P+ Y +++D Y KL + + + S ++H
Sbjct: 690 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 120/469 (25%), Positives = 208/469 (44%), Gaps = 36/469 (7%)
Query: 68 AMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLS 127
A++V + ++G PS T L+++ VR ++ E + +V K + PDVY +TT ++
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAIN 268
Query: 128 GFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSP 187
F K E A+++F +M AG PN+ TFN +I G G + E +++ P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVY 247
++T++ L+ + + V KEM + GF P +N LI ++ GS ++A +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 248 KRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG 307
M+ G++ STYN ++ + G + +E++L EM + N+ +++S++ +
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448
Query: 308 KEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTL 367
F+ E+ ++ LL TL+ K ++A + +F +G D T
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508
Query: 368 NAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILE 427
NA+L +G + E+G FR I +EIL
Sbjct: 509 NALL--HG--------------LCEAG---------------KLDEAFR----IQKEILG 533
Query: 428 KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGE 487
+G D +SYN +I C K+ EA L+EM PD TY+ + + E
Sbjct: 534 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 488 AIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLH 536
AI + G PD TY+ ++D CK EE F + S ++
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 642
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 138/267 (51%), Gaps = 11/267 (4%)
Query: 1 MLMD-MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
M +D M +GL PD T++ LI + EEA++ +++ K G+ PD+ TY+ ++D
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 620
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
K+ R +E E +M S+ P+ V Y LI AY R G L ALEL+ M K I P+
Sbjct: 621 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNS 680
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TYT+L+ G + E A +FEEMR G +PN+ + ALI YG G ++ + +E
Sbjct: 681 ATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 740
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+ + P+ +T+ ++ + ++G +E S + EM+ G VP+ T+ I Y + G
Sbjct: 741 MHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGG 800
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVL 266
+LEA D Y A++
Sbjct: 801 ----------VLEAFKGSDEENYAAII 817
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 169/394 (42%), Gaps = 9/394 (2%)
Query: 137 LAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ-CSPDIVTWNTL 195
LA+ VF + G P+ T N L+ F + + F + C+ SPD+ + T
Sbjct: 209 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV--CKGVSPDVYLFTTA 266
Query: 196 LAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGV 255
+ F + G E +F +M+ AG P TFNT+I CG +D+A ++M+E G+
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326
Query: 256 TPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNA 315
P L TY+ ++ L R + VL EM PN + Y++L+ ++ K
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 386
Query: 316 LAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYG 375
+ + + S ++ + TL+ K AE E G + + +++ L
Sbjct: 387 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 446
Query: 376 RKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILR---EILEKGIEP 432
+ + L+F+ E PG L L S K L + L KG
Sbjct: 447 SHLMF---DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVV 503
Query: 433 DLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVV 492
D + N +++ C GK+ EA RI E+ V D V+YNT ++ EA +
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563
Query: 493 QCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNF 526
M+K+G KPD TY+ ++ ++ EEA F
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQF 597
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 105/214 (49%), Gaps = 5/214 (2%)
Query: 326 TTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNK 385
TT +LL +LV N +F EA + +G+ D+ ++ + + V + K
Sbjct: 227 TTCNILLTSLVRAN-EFQKCCEA----FDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVK 281
Query: 386 ILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYC 445
+ M E+G ++ +N+++ + ++ M +++E+G+EP LI+Y+I++
Sbjct: 282 LFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLT 341
Query: 446 RNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQN 505
R ++ +A +L EM P+V+ YN + ++ +AI + M+ +G +
Sbjct: 342 RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSS 401
Query: 506 TYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSE 539
TYN+++ YCK + A + + S+ +V++
Sbjct: 402 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 191 bits (486), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 139/548 (25%), Positives = 249/548 (45%), Gaps = 45/548 (8%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M+ G+AP++ TFNT+I Y+EA E++ G+ P ++TY+ L+ +++R
Sbjct: 286 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 345
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+A VLK+M +GFPP+++ Y +LI +++ G L +A+E+K+ MV K + TY T
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
L+ G+ + + A R+ +EM + G N +F ++I + MF + E+
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
SP TL++ ++G S+ ++ + GFV + T N L+ G D+A
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
+ K +L G D +YN +++ +++ L EM KP+ TYS L+
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 585
Query: 305 ANGKEFE---------KMNALAEEIY--------------------------SGKITTHA 329
N + E K N + ++Y S + +
Sbjct: 586 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 330 VLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKF 389
V+ L+ + L+ A + K +GI + T +++ V + + +
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 390 MYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGK 449
M G ++ Y +L+ + + K E +LRE+ K + P+ I+Y ++I Y R+G
Sbjct: 706 MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGN 765
Query: 450 MTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNS 509
+TEA R+LNEM++ VPD +TY F+ Y EA D+ Y +
Sbjct: 766 VTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK----------GSDEENYAA 815
Query: 510 IVDWYCKL 517
I++ + KL
Sbjct: 816 IIEGWNKL 823
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 215/455 (47%), Gaps = 4/455 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L +M +G P++ +N LI S AGSL +A+E+ + + GL TYN L+ Y
Sbjct: 352 VLKEMTKKGFPPNVIVYNNLIDSFIEAGSL-NKAIEIKDLMVSKGLSLTSSTYNTLIKGY 410
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
K+ + A +LK+M S GF + ++TS+I + + AL +M+ +++ P
Sbjct: 411 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 470
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TTL+SG K A+ ++ + G + T NAL+ + G E ++ KE
Sbjct: 471 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 530
Query: 180 IKACQCSPDIVTWNTLLA-VFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 238
I C D V++NTL++ G+ LD E EM + G P+ T++ LI
Sbjct: 531 ILGRGCVMDRVSYNTLISGCCGKKKLD-EAFMFLDEMVKRGLKPDNYTYSILICGLFNMN 589
Query: 239 SFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYS 298
++A + G+ PD+ TY+ ++ + E+ ++ EM + +PN V Y+
Sbjct: 590 KVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYN 649
Query: 299 SLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKR 358
L+ AY L E++ I+ ++ +L+ S + EA+ F E +
Sbjct: 650 HLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME 709
Query: 359 GIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKS 418
G+ ++ A++ YG+ + K +L+ M+ + Y ++ ++R N ++
Sbjct: 710 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 769
Query: 419 EMILREILEKGIEPDLISYNIVIYAYCRNGKMTEA 453
+L E+ EKGI PD I+Y IY Y + G + EA
Sbjct: 770 SRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 125/538 (23%), Positives = 241/538 (44%), Gaps = 13/538 (2%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
+ ++G+ P T N L++ + +++ E F+ + G+ PD+ + ++ + K +
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGK 275
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+EA+++ +ME G P++VT+ ++I G +EA K +MVE+ ++P + TY+
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFK--EIKA 182
L+ G AK+ A V +EM G PN+ +N LI F E G + K EIK
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS------FIEAGSLNKAIEIKD 389
Query: 183 CQCSPDIV----TWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 238
S + T+NTL+ + +NG + KEM GF + +F ++I
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 449
Query: 239 SFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYS 298
FD A ML ++P +++ L + G ++ ++ + N + T +
Sbjct: 450 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 509
Query: 299 SLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKR 358
+LLH + ++ + +EI V TL+ L EA E KR
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Query: 359 GIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKS 418
G+ D T + ++ V + + +G + Y+ ++ + +
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 419 EMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVAT 478
+ E++ K ++P+ + YN +I AYCR+G+++ A + +MK P+ TY + +
Sbjct: 630 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Query: 479 YAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLH 536
+ S EA + + M +G +P+ Y +++D Y KL + + + S ++H
Sbjct: 690 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 120/469 (25%), Positives = 208/469 (44%), Gaps = 36/469 (7%)
Query: 68 AMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLS 127
A++V + ++G PS T L+++ VR ++ E + +V K + PDVY +TT ++
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAIN 268
Query: 128 GFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSP 187
F K E A+++F +M AG PN+ TFN +I G G + E +++ P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVY 247
++T++ L+ + + V KEM + GF P +N LI ++ GS ++A +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 248 KRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG 307
M+ G++ STYN ++ + G + +E++L EM + N+ +++S++ +
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448
Query: 308 KEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTL 367
F+ E+ ++ LL TL+ K ++A + +F +G D T
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508
Query: 368 NAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILE 427
NA+L +G + E+G FR I +EIL
Sbjct: 509 NALL--HG--------------LCEAG---------------KLDEAFR----IQKEILG 533
Query: 428 KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGE 487
+G D +SYN +I C K+ EA L+EM PD TY+ + + E
Sbjct: 534 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 488 AIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLH 536
AI + G PD TY+ ++D CK EE F + S ++
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 642
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 138/267 (51%), Gaps = 11/267 (4%)
Query: 1 MLMD-MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
M +D M +GL PD T++ LI + EEA++ +++ K G+ PD+ TY+ ++D
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 620
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
K+ R +E E +M S+ P+ V Y LI AY R G L ALEL+ M K I P+
Sbjct: 621 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNS 680
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TYT+L+ G + E A +FEEMR G +PN+ + ALI YG G ++ + +E
Sbjct: 681 ATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 740
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+ + P+ +T+ ++ + ++G +E S + EM+ G VP+ T+ I Y + G
Sbjct: 741 MHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGG 800
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVL 266
+LEA D Y A++
Sbjct: 801 ----------VLEAFKGSDEENYAAII 817
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 169/394 (42%), Gaps = 9/394 (2%)
Query: 137 LAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ-CSPDIVTWNTL 195
LA+ VF + G P+ T N L+ F + + F + C+ SPD+ + T
Sbjct: 209 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV--CKGVSPDVYLFTTA 266
Query: 196 LAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGV 255
+ F + G E +F +M+ AG P TFNT+I CG +D+A ++M+E G+
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326
Query: 256 TPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNA 315
P L TY+ ++ L R + VL EM PN + Y++L+ ++ K
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 386
Query: 316 LAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYG 375
+ + + S ++ + TL+ K AE E G + + +++ L
Sbjct: 387 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 446
Query: 376 RKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILR---EILEKGIEP 432
+ + L+F+ E PG L L S K L + L KG
Sbjct: 447 SHLMF---DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVV 503
Query: 433 DLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVV 492
D + N +++ C GK+ EA RI E+ V D V+YNT ++ EA +
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563
Query: 493 QCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNF 526
M+K+G KPD TY+ ++ ++ EEA F
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQF 597
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 105/214 (49%), Gaps = 5/214 (2%)
Query: 326 TTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNK 385
TT +LL +LV N +F EA + +G+ D+ ++ + + V + K
Sbjct: 227 TTCNILLTSLVRAN-EFQKCCEA----FDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVK 281
Query: 386 ILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYC 445
+ M E+G ++ +N+++ + ++ M +++E+G+EP LI+Y+I++
Sbjct: 282 LFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLT 341
Query: 446 RNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQN 505
R ++ +A +L EM P+V+ YN + ++ +AI + M+ +G +
Sbjct: 342 RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSS 401
Query: 506 TYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSE 539
TYN+++ YCK + A + + S+ +V++
Sbjct: 402 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/519 (25%), Positives = 238/519 (45%), Gaps = 48/519 (9%)
Query: 17 FNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQME 76
+N +I + ++A LF E++ +PD TY+AL++ +G++ + + AM ++ M
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 77 SRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDE 136
PS TY +LI+A G EALE+ +M + + PD+ T+ +LS + + ++
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 137 LAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI--KACQCSPDIVTWNT 194
A+ FE M+ A +P+ TFN +I G ++ +F + K +C PD+VT+ +
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 195 LLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAG 254
++ ++ G VF+ M G P ++N L+ AY+ G A +V + + G
Sbjct: 194 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 253
Query: 255 VTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY-ANGKEFEKM 313
+ PD+ +Y +L + R ++++V M R KPN VTY++L+ AY +NG
Sbjct: 254 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNG------ 307
Query: 314 NALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSL 373
FLAEA F + ++ GI ++ ++ +L+
Sbjct: 308 ------------------------------FLAEAVEIFRQMEQDGIKPNVVSVCTLLAA 337
Query: 374 YGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPD 433
R K + +L G L+ YNS + + K+ + + + +K ++ D
Sbjct: 338 CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKAD 397
Query: 434 LISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQ 493
+++ I+I CR K EA L EM+D + Y++ + Y+ EA +
Sbjct: 398 SVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFN 457
Query: 494 CMIKQGCKPDQNTYNSIVDWY---------CKLHLREEA 523
M GC+PD Y S++ Y C+L L EA
Sbjct: 458 QMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEA 496
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 136/533 (25%), Positives = 241/533 (45%), Gaps = 39/533 (7%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ +M+ PD T++ LI+ + A+ L +++ A + P TYN L++ G
Sbjct: 33 LFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACG 92
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAY--------------------VRD--- 97
S +EA+EV K+M G P +VT+ ++SAY VR
Sbjct: 93 SSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTT 152
Query: 98 ------------GLLEEALELKNQMVEKH--IKPDVYTYTTLLSGFVNAKKDELAMRVFE 143
G +AL+L N M EK +PDV T+T+++ + + E VFE
Sbjct: 153 TFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFE 212
Query: 144 EMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNG 203
M G KPNI ++NAL+ Y GM V +IK PD+V++ LL +G++
Sbjct: 213 AMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSR 272
Query: 204 LDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYN 263
+ VF M++ P T+N LI AY G +A ++++M + G+ P++ +
Sbjct: 273 QPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVC 332
Query: 264 AVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSG 323
+LAA +R + VLS ++ N Y+S + +Y N E EK AL + +
Sbjct: 333 TLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKK 392
Query: 324 KITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKT 383
K+ +V L+ + + EA E + IP +++L Y ++ V +
Sbjct: 393 KVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEA 452
Query: 384 NKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYA 443
I M +G + Y S+++ ++ + + K+ + E+ GIEPD I+ + ++ A
Sbjct: 453 ESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRA 512
Query: 444 YCRNGKMTEAKRILNEMKDP-APVPDVVTYNTFVATYAANSMFGEAIGVVQCM 495
+ + G+ + +++ M++ P V + F A + AI ++Q M
Sbjct: 513 FNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQE-WKRAIDLIQMM 564
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 127/474 (26%), Positives = 225/474 (47%), Gaps = 11/474 (2%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M ++GL P++ ++N L+ + AL + +IK G+ PD+V+Y LL+ YG+SR+
Sbjct: 214 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQ 273
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
P +A EV M P++VTY +LI AY +G L EA+E+ QM + IKP+V + T
Sbjct: 274 PGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCT 333
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
LL+ +KK V ++ G N +N+ I Y + + +++ ++ +
Sbjct: 334 LLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKK 393
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
D VT+ L++ + E KEM+ +E +++++ AYS+ G +A
Sbjct: 394 VKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAE 453
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
+++ +M AG PD+ Y ++L A W ++ ++ EME +P+ + S+L+ A+
Sbjct: 454 SIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAF 513
Query: 305 ANGKEFEKMNALAEEIYSGKIT-THAVLLKTLVLVNSKFDFLAEAEHA--FLEFKKRGIP 361
G + + L + + +I T AV + N+ L E + A ++ +P
Sbjct: 514 NKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNT----LQEWKRAIDLIQMMDPYLP 569
Query: 362 H-DITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEM 420
I N ML L+G+ V K+ + SG ++L Y L+ N+RK
Sbjct: 570 SLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIE 629
Query: 421 ILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRI---LNEMKDPAPVPDVVT 471
+L + GI+P Y +I R+ + I L EM++ + D VT
Sbjct: 630 VLEWMSGAGIQPSNQMYRDIISFGERSAGIEFEPLIRQKLGEMREECKINDSVT 683
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 193/405 (47%), Gaps = 2/405 (0%)
Query: 138 AMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLA 197
A +F EM+ CKP+ T++ALI +G G + + ++ +P T+N L+
Sbjct: 30 ARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLIN 89
Query: 198 VFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTP 257
G +G E V K+M G P+ T N ++SAY + +A + ++ M A V P
Sbjct: 90 ACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRP 149
Query: 258 DLSTYNAVLAALARGGLWEQSEKVLSEMENGR--CKPNEVTYSSLLHAYANGKEFEKMNA 315
D +T+N ++ L++ G Q+ + + M R C+P+ VT++S++H Y+ E E A
Sbjct: 150 DTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRA 209
Query: 316 LAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYG 375
+ E + + + + V L+ + A + K+ GI D+ + +L+ YG
Sbjct: 210 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 269
Query: 376 RKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLI 435
R + K ++ M + ++ YN+L+ + ++ I R++ + GI+P+++
Sbjct: 270 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVV 329
Query: 436 SYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCM 495
S ++ A R+ K +L+ + + YN+ + +Y + +AI + Q M
Sbjct: 330 SVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM 389
Query: 496 IKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEE 540
K+ K D T+ ++ C++ EA +++ + L + +++E
Sbjct: 390 RKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKE 434
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 142/321 (44%), Gaps = 37/321 (11%)
Query: 220 FVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSE 279
+ + +N +I ++R DQAR ++ M + PD TY+A++ A R G W +
Sbjct: 7 YCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAM 66
Query: 280 KVLSEM----------------------ENGR-----CK--------PNEVTYSSLLHAY 304
++ +M N R CK P+ VT++ +L AY
Sbjct: 67 NLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAY 126
Query: 305 ANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAF--LEFKKRGIPH 362
+G+++ K + E + K+ ++ SK ++A F + K+
Sbjct: 127 KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRP 186
Query: 363 DITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMIL 422
D+ T +++ LY K + + + M G ++ YN+LM ++ + +L
Sbjct: 187 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 246
Query: 423 REILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAAN 482
+I + GI PD++SY ++ +Y R+ + +AK + M+ P+VVTYN + Y +N
Sbjct: 247 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSN 306
Query: 483 SMFGEAIGVVQCMIKQGCKPD 503
EA+ + + M + G KP+
Sbjct: 307 GFLAEAVEIFRQMEQDGIKPN 327
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Query: 368 NAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILE 427
N M+ L+ R V + + M + Y++L+ H R +R + ++ ++L
Sbjct: 15 NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLR 74
Query: 428 KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGE 487
I P +YN +I A +G EA + +M D PD+VT+N ++ Y + + +
Sbjct: 75 AAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSK 134
Query: 488 AIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEK 542
A+ + M +PD T+N I+ YC L + + +LDL S EK
Sbjct: 135 ALSYFELMKGAKVRPDTTTFNIII--YCLSKLGQSS-------QALDLFNSMREK 180
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/519 (25%), Positives = 238/519 (45%), Gaps = 48/519 (9%)
Query: 17 FNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQME 76
+N +I + ++A LF E++ +PD TY+AL++ +G++ + + AM ++ M
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 77 SRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDE 136
PS TY +LI+A G EALE+ +M + + PD+ T+ +LS + + ++
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 137 LAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI--KACQCSPDIVTWNT 194
A+ FE M+ A +P+ TFN +I G ++ +F + K +C PD+VT+ +
Sbjct: 266 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 325
Query: 195 LLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAG 254
++ ++ G VF+ M G P ++N L+ AY+ G A +V + + G
Sbjct: 326 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 385
Query: 255 VTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY-ANGKEFEKM 313
+ PD+ +Y +L + R ++++V M R KPN VTY++L+ AY +NG
Sbjct: 386 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNG------ 439
Query: 314 NALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSL 373
FLAEA F + ++ GI ++ ++ +L+
Sbjct: 440 ------------------------------FLAEAVEIFRQMEQDGIKPNVVSVCTLLAA 469
Query: 374 YGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPD 433
R K + +L G L+ YNS + + K+ + + + +K ++ D
Sbjct: 470 CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKAD 529
Query: 434 LISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQ 493
+++ I+I CR K EA L EM+D + Y++ + Y+ EA +
Sbjct: 530 SVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFN 589
Query: 494 CMIKQGCKPDQNTYNSIVDWY---------CKLHLREEA 523
M GC+PD Y S++ Y C+L L EA
Sbjct: 590 QMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEA 628
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/533 (25%), Positives = 241/533 (45%), Gaps = 39/533 (7%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ +M+ PD T++ LI+ + A+ L +++ A + P TYN L++ G
Sbjct: 165 LFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACG 224
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAY--------------------VRD--- 97
S +EA+EV K+M G P +VT+ ++SAY VR
Sbjct: 225 SSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTT 284
Query: 98 ------------GLLEEALELKNQMVEKH--IKPDVYTYTTLLSGFVNAKKDELAMRVFE 143
G +AL+L N M EK +PDV T+T+++ + + E VFE
Sbjct: 285 TFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFE 344
Query: 144 EMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNG 203
M G KPNI ++NAL+ Y GM V +IK PD+V++ LL +G++
Sbjct: 345 AMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSR 404
Query: 204 LDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYN 263
+ VF M++ P T+N LI AY G +A ++++M + G+ P++ +
Sbjct: 405 QPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVC 464
Query: 264 AVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSG 323
+LAA +R + VLS ++ N Y+S + +Y N E EK AL + +
Sbjct: 465 TLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKK 524
Query: 324 KITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKT 383
K+ +V L+ + + EA E + IP +++L Y ++ V +
Sbjct: 525 KVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEA 584
Query: 384 NKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYA 443
I M +G + Y S+++ ++ + + K+ + E+ GIEPD I+ + ++ A
Sbjct: 585 ESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRA 644
Query: 444 YCRNGKMTEAKRILNEMKDP-APVPDVVTYNTFVATYAANSMFGEAIGVVQCM 495
+ + G+ + +++ M++ P V + F A + AI ++Q M
Sbjct: 645 FNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQE-WKRAIDLIQMM 696
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 214/443 (48%), Gaps = 14/443 (3%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M ++GL P++ ++N L+ + AL + +IK G+ PD+V+Y LL+ YG+SR+
Sbjct: 346 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQ 405
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
P +A EV M P++VTY +LI AY +G L EA+E+ QM + IKP+V + T
Sbjct: 406 PGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCT 465
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
LL+ +KK V ++ G N +N+ I Y + + +++ ++ +
Sbjct: 466 LLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKK 525
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
D VT+ L++ + E KEM+ +E +++++ AYS+ G +A
Sbjct: 526 VKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAE 585
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
+++ +M AG PD+ Y ++L A W ++ ++ EME +P+ + S+L+ A+
Sbjct: 586 SIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAF 645
Query: 305 ANGKEFEKMNALAEEIYSGKIT-THAVLLKTLVLVNSKFDFLAEAEHA--FLEFKKRGIP 361
G + + L + + +I T AV + N+ L E + A ++ +P
Sbjct: 646 NKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNT----LQEWKRAIDLIQMMDPYLP 701
Query: 362 H-DITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEM 420
I N ML L+G+ V K+ + SG ++L Y L+ N+RK
Sbjct: 702 SLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIE 761
Query: 421 ILREILEKGIEP------DLISY 437
+L + GI+P D+IS+
Sbjct: 762 VLEWMSGAGIQPSNQMYRDIISF 784
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/460 (23%), Positives = 214/460 (46%), Gaps = 7/460 (1%)
Query: 86 TYTSLISAYVRDGLLEEALELKNQM-VEKH--IKPDVYTYTTLLSGFVNAKKDELAMRVF 142
+ LI R G +E + + M ++K+ + D+Y L N + A +F
Sbjct: 109 NFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWV--DQARGLF 166
Query: 143 EEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQN 202
EM+ CKP+ T++ALI +G G + + ++ +P T+N L+ G +
Sbjct: 167 FEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSS 226
Query: 203 GLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTY 262
G E V K+M G P+ T N ++SAY + +A + ++ M A V PD +T+
Sbjct: 227 GNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTF 286
Query: 263 NAVLAALARGGLWEQSEKVLSEMENGR--CKPNEVTYSSLLHAYANGKEFEKMNALAEEI 320
N ++ L++ G Q+ + + M R C+P+ VT++S++H Y+ E E A+ E +
Sbjct: 287 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 346
Query: 321 YSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLV 380
+ + + V L+ + A + K+ GI D+ + +L+ YGR +
Sbjct: 347 VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP 406
Query: 381 AKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIV 440
K ++ M + ++ YN+L+ + ++ I R++ + GI+P+++S +
Sbjct: 407 GKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTL 466
Query: 441 IYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGC 500
+ A R+ K +L+ + + YN+ + +Y + +AI + Q M K+
Sbjct: 467 LAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKV 526
Query: 501 KPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEE 540
K D T+ ++ C++ EA +++ + L + +++E
Sbjct: 527 KADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKE 566
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 144/325 (44%), Gaps = 22/325 (6%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +S+G+ + +N+ I + E+A+ L++ ++ ++ D VT+ L+
Sbjct: 482 VLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSC 541
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ + EA+ LK+ME P + Y+S++ AY + G + EA + NQM +PDV
Sbjct: 542 RMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVI 601
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
YT++L + ++K A +F EM G +P+ +AL++ + G + VF +
Sbjct: 602 AYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG---QPSNVFVLM 658
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRA--------GFVPERET--FNTL 230
+ T +F +E KRA ++P N +
Sbjct: 659 DLMREKEIPFTGAVFFEIF-------SACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQM 711
Query: 231 ISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRC 290
+ + + G + ++ +++ +GV +L TY +L L G W + +VL M
Sbjct: 712 LHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGI 771
Query: 291 KPNEVTYSSLLH--AYANGKEFEKM 313
+P+ Y ++ + G EFE +
Sbjct: 772 QPSNQMYRDIISFGERSAGIEFEPL 796
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Query: 368 NAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILE 427
N M+ L+ R V + + M + Y++L+ H R +R + ++ ++L
Sbjct: 147 NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLR 206
Query: 428 KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGE 487
I P +YN +I A +G EA + +M D PD+VT+N ++ Y + + +
Sbjct: 207 AAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSK 266
Query: 488 AIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEK 542
A+ + M +PD T+N I+ YC L + + +LDL S EK
Sbjct: 267 ALSYFELMKGAKVRPDTTTFNIII--YCLSKLGQSS-------QALDLFNSMREK 312
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 135/526 (25%), Positives = 238/526 (45%), Gaps = 1/526 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +MKS L D+ +N I + A + F EI+ GL+PD VTY +++ V
Sbjct: 225 LLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLC 284
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K+ R EA+E+ + +E P Y ++I Y G +EA L + K P V
Sbjct: 285 KANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVI 344
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
Y +L+ K + A++VFEEM+ PN+ T+N LI M G ++ +
Sbjct: 345 AYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSM 403
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ P++ T N ++ ++ E +F+EM P+ TF +LI + G
Sbjct: 404 QKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRV 463
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
D A VY++ML++ + Y +++ G E K+ +M N C P+ ++
Sbjct: 464 DDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTY 523
Query: 301 LHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI 360
+ E EK A+ EEI + + A L+ K F E F K++G
Sbjct: 524 MDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGC 583
Query: 361 PHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEM 420
D N ++ + + V K ++L+ M GF ++ Y S++ ++ ++ M
Sbjct: 584 VLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYM 643
Query: 421 ILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYA 480
+ E K IE +++ Y+ +I + + G++ EA IL E+ P++ T+N+ +
Sbjct: 644 LFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALV 703
Query: 481 ANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNF 526
EA+ Q M + C P+Q TY +++ CK+ +A+ F
Sbjct: 704 KAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVF 749
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 231/476 (48%), Gaps = 1/476 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +++G P + +N +++C R +EAL++FEE+K P++ TYN L+D+
Sbjct: 330 LLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLC 388
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
++ + A E+ M+ G P++ T ++ + L+EA + +M K PD
Sbjct: 389 RAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEI 448
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
T+ +L+ G + + A +V+E+M + C+ N + +LIK + + G + K++K++
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
CSPD+ NT + + G + +F+E+K FVP+ +++ LI + G
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFA 568
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
++ ++ M E G D YN V+ + G ++ ++L EM+ +P VTY S+
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 301 LHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI 360
+ A ++ L EE S +I + V+ +L+ K + EA E ++G+
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
Query: 361 PHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEM 420
++ T N++L + + + + + M E T + Y L+ + R F K+ +
Sbjct: 689 TPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFV 748
Query: 421 ILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFV 476
+E+ ++G++P ISY +I + G + EA + + K VPD YN +
Sbjct: 749 FWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMI 804
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 128/540 (23%), Positives = 242/540 (44%), Gaps = 9/540 (1%)
Query: 16 TFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQM 75
++N+L+ ++ ++ E+ +AG P + T ++ K+ + +E +V++ M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 76 ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKD 135
F P+ YT+LI A+ + L L QM E +P V+ +TTL+ GF +
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 136 ELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTL 195
+ A+ + +EM+++ +I +N I +G G K F EI+A PD VT+ ++
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 196 LAVFGQ-NGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAG 254
+ V + N LD V +F+ +++ VP +NT+I Y G FD+A ++ +R G
Sbjct: 280 IGVLCKANRLDEAVE-MFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 255 VTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMN 314
P + YN +L L + G +++ KV EM+ PN TY+ L+ + +
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD-AAPNLSTYNILIDMLCRAGKLDTAF 397
Query: 315 ALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLY 374
L + + + + + +V K L EA F E + D T +++
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL 457
Query: 375 GRKKLVAKTNKILKFMYESGFTLSLPGYNSLM---YLHSRTRNFRKSEMILREILEKGIE 431
G+ V K+ + M +S + Y SL+ + H R + K I ++++ +
Sbjct: 458 GKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHK---IYKDMINQNCS 514
Query: 432 PDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGV 491
PDL N + + G+ + + + E+K VPD +Y+ + E +
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYEL 574
Query: 492 VQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEKGRLLERIAE 551
M +QGC D YN ++D +CK +AY + + + + G +++ +A+
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 121/254 (47%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +MK++G P + T+ ++I +EA LFEE K + ++V Y++L+D +G
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K R EA +L+++ +G P++ T+ SL+ A V+ + EAL M E P+
Sbjct: 669 KVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQV 728
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY L++G +K A ++EM+ G KP+ ++ +I G AE G +F
Sbjct: 729 TYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRF 788
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
KA PD +N ++ + +F+E +R G +T L+ +
Sbjct: 789 KANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCL 848
Query: 241 DQARAVYKRMLEAG 254
+QA V + E G
Sbjct: 849 EQAAIVGAVLRETG 862
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/330 (20%), Positives = 136/330 (41%), Gaps = 7/330 (2%)
Query: 225 ETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSE 284
E++N+L+ +RC +FD + M AG P ++T ++ + + V+
Sbjct: 99 ESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQM 158
Query: 285 MENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDF 344
M + +P Y++L+ A++ + M L +++ L TL+ +K
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 345 LAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYE---SGFTLSLPG 401
+ A E K + DI N + +G+ V K + KF +E +G
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGK---VGKVDMAWKFFHEIEANGLKPDEVT 275
Query: 402 YNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMK 461
Y S++ + + ++ + + + P +YN +I Y GK EA +L +
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQR 335
Query: 462 DPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLRE 521
+P V+ YN + EA+ V + M K+ P+ +TYN ++D C+ +
Sbjct: 336 AKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLD 394
Query: 522 EAYNFVHNLSSLDLHVSEEEKGRLLERIAE 551
A+ ++ L + +++R+ +
Sbjct: 395 TAFELRDSMQKAGLFPNVRTVNIMVDRLCK 424
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 210/462 (45%), Gaps = 39/462 (8%)
Query: 40 IKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGL 99
++ + +PD++ +N L+D YG+ + KEA + Q+ + P+ TY LI AY GL
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 100 LEEALELKNQMVEKHIKPD---VYTYTTLLSGFVNAKKD-ELAMRVFEEMRTAGCKPNIC 155
+E A + +M H+ P V Y + G + K + E A+ VF+ M+ CKP
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 156 TFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEM 215
T+N +I +YG K++ E+++ QC P+I T+ L+ F + GL + +F+++
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 347
Query: 216 KRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLW 275
+ G P+ +N L+ +YSR G A ++ M G PD ++YN ++ A R GL
Sbjct: 348 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 407
Query: 276 EQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTL 335
+E V EM+ P ++ LL AY+ ++ K A+ +E+
Sbjct: 408 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM--------------- 452
Query: 336 VLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGF 395
+ G+ D LN+ML+LYGR K KIL M
Sbjct: 453 --------------------SENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPC 492
Query: 396 TLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKR 455
T + YN L+ ++ + + E + E+ EK PD++++ I AY R +
Sbjct: 493 TADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLE 552
Query: 456 ILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIK 497
+ EM D PD T ++ ++ + V++ M K
Sbjct: 553 VFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 594
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 194/395 (49%), Gaps = 6/395 (1%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
++ PD+ FN LI Y+EA L+ ++ + P TY L+ Y +
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYV-----RDGLLEEALELKNQMVEKHIKPDV 119
+ A VL +M++ P + T + +AY+ R G EEA+++ +M KP
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVT-VYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 286
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TY +++ + A K ++ +++ EMR+ CKPNICT+ AL+ + G+ + ++F++
Sbjct: 287 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 346
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
++ PD+ +N L+ + + G + +F M+ G P+R ++N ++ AY R G
Sbjct: 347 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 406
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
A AV++ M G+ P + ++ +L+A ++ + E ++ EM +P+ +S
Sbjct: 407 HSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNS 466
Query: 300 LLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRG 359
+L+ Y +F KM + E+ +G T L+ + K FL E F+E K++
Sbjct: 467 MLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKN 526
Query: 360 IPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESG 394
D+ T + + Y RKKL K ++ + M +SG
Sbjct: 527 FRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 561
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 156/298 (52%), Gaps = 6/298 (2%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M+S P++CT+ L++ L E+A E+FE+++ GL PD+ YNAL++ Y ++
Sbjct: 311 EMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG 370
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
P A E+ M+ G P +Y ++ AY R GL +A + +M I P + ++
Sbjct: 371 YPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHM 430
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
LLS + A+ + +EM G +P+ N+++ +YG G F +M K+ E++
Sbjct: 431 LLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENG 490
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
C+ DI T+N L+ ++G+ G + +F E+K F P+ T+ + I AYSR + +
Sbjct: 491 PCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKC 550
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL 301
V++ M+++G PD T +L+A + EQ VL M G VT SSL+
Sbjct: 551 LEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKG------VTVSSLV 602
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 175/394 (44%), Gaps = 4/394 (1%)
Query: 130 VNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDI 189
+N K D + + +R + +P++ FN LI YG + + E ++ ++ + P
Sbjct: 153 LNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTE 212
Query: 190 VTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPER---ETFNTLISAY-SRCGSFDQARA 245
T+ L+ + GL V EM+ P+ +N I R G+ ++A
Sbjct: 213 DTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAID 272
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA 305
V++RM P TYN ++ + S K+ EM + +CKPN TY++L++A+A
Sbjct: 273 VFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFA 332
Query: 306 NGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDIT 365
EK + E++ + + L+ S+ + A F + G D
Sbjct: 333 REGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRA 392
Query: 366 TLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREI 425
+ N M+ YGR L + + + M G ++ + L+ +S+ R+ K E I++E+
Sbjct: 393 SYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM 452
Query: 426 LEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMF 485
E G+EPD N ++ Y R G+ T+ ++IL EM++ D+ TYN + Y
Sbjct: 453 SENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFL 512
Query: 486 GEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHL 519
+ + ++ +PD T+ S + Y + L
Sbjct: 513 ERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKL 546
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 112/273 (41%), Gaps = 33/273 (12%)
Query: 252 EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE 311
++ PD+ +N ++ A + ++++E + ++ R P E TY+ L+ AY E
Sbjct: 170 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIE 229
Query: 312 KMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAML 371
+ + E+ H V KT+ +T NA +
Sbjct: 230 RAEVVLVEM-----QNHHVSPKTI---------------------------GVTVYNAYI 257
Query: 372 -SLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGI 430
L RK + + + M + YN ++ L+ + S + E+
Sbjct: 258 EGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQC 317
Query: 431 EPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIG 490
+P++ +Y ++ A+ R G +A+ I ++++ PDV YN + +Y+ A
Sbjct: 318 KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAE 377
Query: 491 VVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEA 523
+ M GC+PD+ +YN +VD Y + L +A
Sbjct: 378 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDA 410
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 73/146 (50%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
++ +M G+ PD N++++ + + ++ E++ D+ TYN L+++YG
Sbjct: 448 IVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYG 507
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K+ + E+ +++ + F P +VT+TS I AY R L + LE+ +M++ PD
Sbjct: 508 KAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGG 567
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMR 146
T LLS + ++ E V M
Sbjct: 568 TAKVLLSACSSEEQVEQVTSVLRTMH 593
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 138/548 (25%), Positives = 254/548 (46%), Gaps = 36/548 (6%)
Query: 5 MKSQGLAPDLCTFNTLISCC-RAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M +G+ DL + L+ +AG L EA + F+ + P++VTY AL+D K+
Sbjct: 320 MVVRGIPVDLVVYTVLMDGLFKAGDL-REAEKTFKMLLEDNQVPNVVTYTALVDGLCKAG 378
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
A ++ QM + P++VTY+S+I+ YV+ G+LEEA+ L +M ++++ P+ +TY
Sbjct: 379 DLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYG 438
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
T++ G A K+E+A+ + +EMR G + N +AL+ G E+ + K++ +
Sbjct: 439 TVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSK 498
Query: 184 QCSPDIVTWNTLLAVFGQNG-----------------------LDSEVSGV--------- 211
+ D + + +L+ VF + G + +SG+
Sbjct: 499 GVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGAD 558
Query: 212 --FKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAAL 269
+K M+ G P+ TFN ++++ + G + ++ +M G+ P L + N V+ L
Sbjct: 559 WAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGML 618
Query: 270 ARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHA 329
G E++ +L++M PN TY L + K + + E + S I
Sbjct: 619 CENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSR 678
Query: 330 VLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKF 389
+ TL+ K +A + + RG D T N+++ Y V K
Sbjct: 679 QVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSV 738
Query: 390 MYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGK 449
M E+G + ++ YN+++ S ++ + L E+ +G+ PD +YN +I + G
Sbjct: 739 MMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGN 798
Query: 450 MTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNS 509
M + I EM VP TYN ++ +A +A +++ M K+G P+ +TY +
Sbjct: 799 MKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCT 858
Query: 510 IVDWYCKL 517
++ CKL
Sbjct: 859 MISGLCKL 866
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/553 (24%), Positives = 249/553 (45%), Gaps = 41/553 (7%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY---GK 61
++++ ++ D T+NT+IS L +EA + E+ G+ PD V+YN L+D + G
Sbjct: 152 LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGN 211
Query: 62 SRRPKEAM-------------------------EVLKQMESRGFPPSIVTYTSLISAYVR 96
R K + E + M GF P +VT++S+I+ +
Sbjct: 212 FVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCK 271
Query: 97 DGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICT 156
G + E L +M E + P+ TYTTL+ A A+ ++ +M G ++
Sbjct: 272 GGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVV 331
Query: 157 FNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMK 216
+ L+ G E K FK + P++VT+ L+ + G S + +M
Sbjct: 332 YTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQML 391
Query: 217 RAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWE 276
+P T++++I+ Y + G ++A ++ ++M + V P+ TY V+ L + G E
Sbjct: 392 EKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEE 451
Query: 277 QSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLV 336
+ ++ EM + N +L++ +++ L +++ S +T + +L+
Sbjct: 452 MAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLI 511
Query: 337 LVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLS---LYGRKKLVAKTNKILKFMYES 393
V K A E ++RG+P D+ + N ++S +G+ + K M E
Sbjct: 512 DVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGK----VGADWAYKGMREK 567
Query: 394 GFTLSLPGYNSLMYLHSRTRNFRKSEMILR---EILEKGIEPDLISYNIVIYAYCRNGKM 450
G + +N +M + R SE IL+ ++ GI+P L+S NIV+ C NGKM
Sbjct: 568 GIEPDIATFNIMM---NSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKM 624
Query: 451 TEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSI 510
EA ILN+M P++ TY F+ T + + + ++ G K + YN++
Sbjct: 625 EEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTL 684
Query: 511 VDWYCKLHLREEA 523
+ CKL + ++A
Sbjct: 685 IATLCKLGMTKKA 697
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 140/590 (23%), Positives = 257/590 (43%), Gaps = 83/590 (14%)
Query: 4 DMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
DM G PD+ TF+++I+ C+ G + E L L E++ + P+ VTY L+D K+
Sbjct: 249 DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGL-LLREMEEMSVYPNHVTYTTLVDSLFKA 307
Query: 63 RRPKEAMEVLKQMESRGFPPS-----------------------------------IVTY 87
+ A+ + QM RG P +VTY
Sbjct: 308 NIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTY 367
Query: 88 TSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFV----------------- 130
T+L+ + G L A + QM+EK + P+V TY+++++G+V
Sbjct: 368 TALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMED 427
Query: 131 ------------------NAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAE 172
A K+E+A+ + +EMR G + N +AL+ G E
Sbjct: 428 QNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKE 487
Query: 173 MGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLIS 232
+ + K++ + + D + + +L+ VF + G + +EM+ G + ++N LIS
Sbjct: 488 VKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLIS 547
Query: 233 AYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKP 292
+ G A YK M E G+ PD++T+N ++ + + G E K+ +M++ KP
Sbjct: 548 GMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKP 606
Query: 293 NEVTYSSLLHAYA-NGKEFEKMNALAE----EIYSGKITTHAVLLKTLVLVNSKFDFLAE 347
+ ++ + ++ NGK E ++ L + EI+ +TT+ + L T + + D + +
Sbjct: 607 SLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHP-NLTTYRIFLDT-SSKHKRADAIFK 664
Query: 348 AEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMY 407
L + GI N +++ + + K ++ M GF +NSLM+
Sbjct: 665 THETLLSY---GIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMH 721
Query: 408 LHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVP 467
+ + RK+ ++E GI P++ +YN +I G + E + L+EMK P
Sbjct: 722 GYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRP 781
Query: 468 DVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKL 517
D TYN ++ A ++ + MI G P +TYN ++ + +
Sbjct: 782 DDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANV 831
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/536 (21%), Positives = 219/536 (40%), Gaps = 119/536 (22%)
Query: 59 YGKSRRPK--EAMEVLKQMESRGFPPSIV-----TYTSLISAYVRDGL----LEEALELK 107
+ +RP+ E+ E + R F P + Y SL R L L A
Sbjct: 22 FSSIKRPQIPESEETSLSITQRRFDPDLAPIKTRVYVSLFHTLFRLYLSCERLYGAARTL 81
Query: 108 NQMVEKHIKPDVYTYTTLLSGF-VNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGD 166
+ M + PD + +L+ F VN + ++ +M G P++ N LI
Sbjct: 82 SAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHS--- 138
Query: 167 RGMFAEMGKVFKEIKACQ---CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPE 223
F ++G++ I + S D VT+NT+++ ++GL E EM + G +P+
Sbjct: 139 ---FCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPD 195
Query: 224 RETFNTLISAYSRCGSFDQARAV----------------------------YKRMLEAGV 255
++NTLI + + G+F +A+A+ Y+ M+ +G
Sbjct: 196 TVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGF 255
Query: 256 TPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNA 315
PD+ T+++++ L +GG + +L EME PN VTY++L+
Sbjct: 256 DPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLV-------------- 301
Query: 316 LAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYG 375
+ ++ I HA+ L + ++V RGIP D+ ++
Sbjct: 302 --DSLFKANIYRHALALYSQMVV-------------------RGIPVDLVVYTVLMDGLF 340
Query: 376 RKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLI 435
+ + + K K + E ++ Y +L+ + + +E I+ ++LEK + P+++
Sbjct: 341 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 400
Query: 436 SYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVA------------------ 477
+Y+ +I Y + G + EA +L +M+D VP+ TY T +
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460
Query: 478 --------TYAANSMFG---------EAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
Y +++ E G+V+ M+ +G DQ Y S++D + K
Sbjct: 461 RLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFK 516
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 165/345 (47%), Gaps = 11/345 (3%)
Query: 187 PDIVTWNTLLAVFGQNGL-DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
PD WN+L+ F NGL +VS ++ +M G P+ N LI ++ + G A +
Sbjct: 91 PDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAIS 150
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA 305
+ + + ++ D TYN V++ L GL +++ + LSEM P+ V+Y++L+ +
Sbjct: 151 LLRNRV---ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFC 207
Query: 306 NGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDIT 365
F + AL +EI + TH +LL S + L E A+ + G D+
Sbjct: 208 KVGNFVRAKALVDEISELNLITHTILL-------SSYYNLHAIEEAYRDMVMSGFDPDVV 260
Query: 366 TLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREI 425
T +++++ + V + +L+ M E + Y +L+ + +R + + ++
Sbjct: 261 TFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQM 320
Query: 426 LEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMF 485
+ +GI DL+ Y +++ + G + EA++ + + VP+VVTY V
Sbjct: 321 VVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDL 380
Query: 486 GEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
A ++ M+++ P+ TY+S+++ Y K + EEA + + +
Sbjct: 381 SSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 425
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 143/329 (43%), Gaps = 50/329 (15%)
Query: 5 MKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
MKS G+ P L + N ++ C G + EEA+ + ++ L + P++ TY LD K +
Sbjct: 599 MKSCGIKPSLMSCNIVVGMLCENGKM-EEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHK 657
Query: 64 RP-----------------------------------KEAMEVLKQMESRGFPPSIVTYT 88
R K+A V+ ME+RGF P VT+
Sbjct: 658 RADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFN 717
Query: 89 SLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTA 148
SL+ Y + +AL + M+E I P+V TY T++ G +A + + EM++
Sbjct: 718 SLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSR 777
Query: 149 GCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEV 208
G +P+ T+NALI G ++ E+ A P T+N L++ F G +
Sbjct: 778 GMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQA 837
Query: 209 SGVFKEMKRAGFVPERETFNTLISAYSR-CGSFD-----------QARAVYKRML-EAGV 255
+ KEM + G P T+ T+IS + C D +A+ + K M+ E G
Sbjct: 838 RELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGY 897
Query: 256 TPDLSTYNAVLAALARGGLWEQSEKVLSE 284
P T + AA ++ G+ +E+ L E
Sbjct: 898 IPCNQTIYWISAAFSKPGMKVDAERFLKE 926
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
Query: 420 MILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATY 479
+I +++ G+ PD+ + N++I+++C+ G+++ A +L ++ D VTYNT ++
Sbjct: 115 LIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLL---RNRVISIDTVTYNTVISGL 171
Query: 480 AANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDL 535
+ + EA + M+K G PD +YN+++D +CK+ A V +S L+L
Sbjct: 172 CEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNL 227
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 210/462 (45%), Gaps = 39/462 (8%)
Query: 40 IKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGL 99
++ + +PD++ +N L+D YG+ + KEA + Q+ + P+ TY LI AY GL
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 100 LEEALELKNQMVEKHIKPD---VYTYTTLLSGFVNAKKD-ELAMRVFEEMRTAGCKPNIC 155
+E A + +M H+ P V Y + G + K + E A+ VF+ M+ CKP
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 156 TFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEM 215
T+N +I +YG K++ E+++ QC P+I T+ L+ F + GL + +F+++
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 325
Query: 216 KRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLW 275
+ G P+ +N L+ +YSR G A ++ M G PD ++YN ++ A R GL
Sbjct: 326 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 385
Query: 276 EQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTL 335
+E V EM+ P ++ LL AY+ ++ K A+ +E+
Sbjct: 386 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM--------------- 430
Query: 336 VLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGF 395
+ G+ D LN+ML+LYGR K KIL M
Sbjct: 431 --------------------SENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPC 470
Query: 396 TLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKR 455
T + YN L+ ++ + + E + E+ EK PD++++ I AY R +
Sbjct: 471 TADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLE 530
Query: 456 ILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIK 497
+ EM D PD T ++ ++ + V++ M K
Sbjct: 531 VFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 572
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 194/395 (49%), Gaps = 6/395 (1%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
++ PD+ FN LI Y+EA L+ ++ + P TY L+ Y +
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYV-----RDGLLEEALELKNQMVEKHIKPDV 119
+ A VL +M++ P + T + +AY+ R G EEA+++ +M KP
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVT-VYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 264
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TY +++ + A K ++ +++ EMR+ CKPNICT+ AL+ + G+ + ++F++
Sbjct: 265 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 324
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
++ PD+ +N L+ + + G + +F M+ G P+R ++N ++ AY R G
Sbjct: 325 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 384
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
A AV++ M G+ P + ++ +L+A ++ + E ++ EM +P+ +S
Sbjct: 385 HSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNS 444
Query: 300 LLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRG 359
+L+ Y +F KM + E+ +G T L+ + K FL E F+E K++
Sbjct: 445 MLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKN 504
Query: 360 IPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESG 394
D+ T + + Y RKKL K ++ + M +SG
Sbjct: 505 FRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 539
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 156/298 (52%), Gaps = 6/298 (2%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M+S P++CT+ L++ L E+A E+FE+++ GL PD+ YNAL++ Y ++
Sbjct: 289 EMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG 348
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
P A E+ M+ G P +Y ++ AY R GL +A + +M I P + ++
Sbjct: 349 YPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHM 408
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
LLS + A+ + +EM G +P+ N+++ +YG G F +M K+ E++
Sbjct: 409 LLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENG 468
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
C+ DI T+N L+ ++G+ G + +F E+K F P+ T+ + I AYSR + +
Sbjct: 469 PCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKC 528
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL 301
V++ M+++G PD T +L+A + EQ VL M G VT SSL+
Sbjct: 529 LEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKG------VTVSSLV 580
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 175/394 (44%), Gaps = 4/394 (1%)
Query: 130 VNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDI 189
+N K D + + +R + +P++ FN LI YG + + E ++ ++ + P
Sbjct: 131 LNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTE 190
Query: 190 VTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPER---ETFNTLISAY-SRCGSFDQARA 245
T+ L+ + GL V EM+ P+ +N I R G+ ++A
Sbjct: 191 DTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAID 250
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA 305
V++RM P TYN ++ + S K+ EM + +CKPN TY++L++A+A
Sbjct: 251 VFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFA 310
Query: 306 NGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDIT 365
EK + E++ + + L+ S+ + A F + G D
Sbjct: 311 REGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRA 370
Query: 366 TLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREI 425
+ N M+ YGR L + + + M G ++ + L+ +S+ R+ K E I++E+
Sbjct: 371 SYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM 430
Query: 426 LEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMF 485
E G+EPD N ++ Y R G+ T+ ++IL EM++ D+ TYN + Y
Sbjct: 431 SENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFL 490
Query: 486 GEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHL 519
+ + ++ +PD T+ S + Y + L
Sbjct: 491 ERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKL 524
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 110/268 (41%), Gaps = 33/268 (12%)
Query: 257 PDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNAL 316
PD+ +N ++ A + ++++E + ++ R P E TY+ L+ AY E+ +
Sbjct: 153 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 212
Query: 317 AEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAML-SLYG 375
E+ H V KT+ +T NA + L
Sbjct: 213 LVEM-----QNHHVSPKTI---------------------------GVTVYNAYIEGLMK 240
Query: 376 RKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLI 435
RK + + + M + YN ++ L+ + S + E+ +P++
Sbjct: 241 RKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNIC 300
Query: 436 SYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCM 495
+Y ++ A+ R G +A+ I ++++ PDV YN + +Y+ A + M
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 360
Query: 496 IKQGCKPDQNTYNSIVDWYCKLHLREEA 523
GC+PD+ +YN +VD Y + L +A
Sbjct: 361 QHMGCEPDRASYNIMVDAYGRAGLHSDA 388
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 73/145 (50%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
++ +M G+ PD N++++ + + ++ E++ D+ TYN L+++YG
Sbjct: 426 IVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYG 485
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K+ + E+ +++ + F P +VT+TS I AY R L + LE+ +M++ PD
Sbjct: 486 KAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGG 545
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEM 145
T LLS + ++ E V M
Sbjct: 546 TAKVLLSACSSEEQVEQVTSVLRTM 570
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 226/474 (47%), Gaps = 1/474 (0%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
DM P + F+ L+S + ++ + L E+++ G+ ++ TY+ ++ + +
Sbjct: 65 DMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRS 124
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ A+ +L +M G+ PSIVT SL++ + + EA+ L +QMVE +PD T+T
Sbjct: 125 QLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFT 184
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
TL+ G K A+ + E M GC+P++ T+ A+I RG + +++
Sbjct: 185 TLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG 244
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
+ D+V +NT++ + + +F +M+ G P+ T+N LIS G + A
Sbjct: 245 KIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDA 304
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM-ENGRCKPNEVTYSSLLH 302
+ MLE + PDL +NA++ A + G ++EK+ EM ++ C P+ V Y++L+
Sbjct: 305 SRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIK 364
Query: 303 AYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPH 362
+ K E+ + E+ + + V TL+ + A+ F + G+
Sbjct: 365 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 424
Query: 363 DITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMIL 422
DI T N +L V + ++M + L + Y +++ + +
Sbjct: 425 DIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLF 484
Query: 423 REILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFV 476
+ KG++P++++Y ++ +CR G EA + EMK+ P+P+ TYNT +
Sbjct: 485 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/494 (21%), Positives = 229/494 (46%), Gaps = 36/494 (7%)
Query: 31 EEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSL 90
++A+ LF ++ + P +V ++ LL K + + + +QM++ G ++ TY+
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116
Query: 91 ISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
I+ + R L AL + +M++ P + T +LL+GF + + A+ + ++M G
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
+P+ TF L+ +E + + + C PD+VT+ ++ + G
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
+ +M++ + +NT+I + D A ++ +M G+ PD+ TYN +++ L
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYAN-GKEFEKMNALAEEIYSGKITTHA 329
G W + ++LS+M P+ V +++L+ A+ GK E AE++Y
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVE-----AEKLY-------- 343
Query: 330 VLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKF 389
D + +++H F D+ N ++ + + K V + ++ +
Sbjct: 344 -------------DEMVKSKHCF---------PDVVAYNTLIKGFCKYKRVEEGMEVFRE 381
Query: 390 MYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGK 449
M + G + Y +L++ + R+ ++M+ ++++ G+ PD+++YNI++ C NG
Sbjct: 382 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN 441
Query: 450 MTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNS 509
+ A + M+ D+VTY T + + + + +G KP+ TY +
Sbjct: 442 VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 501
Query: 510 IVDWYCKLHLREEA 523
++ +C+ L+EEA
Sbjct: 502 MMSGFCRKGLKEEA 515
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 198/431 (45%), Gaps = 36/431 (8%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L M G P + T N+L++ G+ EA+ L +++ G +PD VT+ L+
Sbjct: 132 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 191
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ + EA+ ++++M +G P +VTY ++I+ + G + AL L N+M + I+ DV
Sbjct: 192 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 251
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICT------------------------ 156
Y T++ G K + A +F +M T G KP++ T
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Query: 157 -----------FNALIKMYGDRGMFAEMGKVFKE-IKACQCSPDIVTWNTLLAVFGQNGL 204
FNALI + G E K++ E +K+ C PD+V +NTL+ F +
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Query: 205 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNA 264
E VF+EM + G V T+ TLI + + D A+ V+K+M+ GV PD+ TYN
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431
Query: 265 VLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGK 324
+L L G E + V M+ K + VTY++++ A + E L +
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491
Query: 325 ITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTN 384
+ + V T++ + EA+ F+E K+ G + T N ++ R A +
Sbjct: 492 VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASA 551
Query: 385 KILKFMYESGF 395
+++K M GF
Sbjct: 552 ELIKEMRSCGF 562
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 140/284 (49%), Gaps = 1/284 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEE-IKLAGLRPDMVTYNALLDVY 59
+L DM + + PDL FN LI EA +L++E +K PD+V YN L+ +
Sbjct: 307 LLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGF 366
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
K +R +E MEV ++M RG + VTYT+LI + + + A + QMV + PD+
Sbjct: 367 CKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDI 426
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TY LL G N E A+ VFE M+ K +I T+ +I+ G + +F
Sbjct: 427 MTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCS 486
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+ P++VT+ T+++ F + GL E +F EMK G +P T+NTLI A R G
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGD 546
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLS 283
+ + K M G D ST+ V L G L + +LS
Sbjct: 547 EAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDKSFLDMLS 590
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 151/329 (45%), Gaps = 2/329 (0%)
Query: 204 LDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYN 263
LD + G+F +M ++ P F+ L+SA ++ FD ++ ++M G++ +L TY+
Sbjct: 56 LDDAI-GLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 264 AVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSG 323
+ R + +L +M P+ VT +SLL+ + +G + AL +++
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 324 KITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKT 383
V TLV + + +EA +G D+ T A+++ ++
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 384 NKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYA 443
+L M + + YN+++ + ++ + + ++ KGI+PD+ +YN +I
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 444 YCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIK-QGCKP 502
C G+ ++A R+L++M + PD+V +N + + EA + M+K + C P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 503 DQNTYNSIVDWYCKLHLREEAYNFVHNLS 531
D YN+++ +CK EE +S
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMS 383
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 97/208 (46%), Gaps = 4/208 (1%)
Query: 325 ITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTN 384
I + LL + +N KFD + + + GI H++ T + ++ + R+ ++
Sbjct: 75 IVEFSKLLSAIAKMN-KFDLVISLGE---QMQNLGISHNLYTYSIFINYFCRRSQLSLAL 130
Query: 385 KILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAY 444
IL M + G+ S+ NSL+ ++ ++ +++E G +PD +++ +++
Sbjct: 131 AILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGL 190
Query: 445 CRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQ 504
++ K +EA ++ M PD+VTY + A+ ++ M K + D
Sbjct: 191 FQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADV 250
Query: 505 NTYNSIVDWYCKLHLREEAYNFVHNLSS 532
YN+I+D CK ++A++ + + +
Sbjct: 251 VIYNTIIDGLCKYKHMDDAFDLFNKMET 278
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/551 (23%), Positives = 256/551 (46%), Gaps = 12/551 (2%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
DM P + FN L+S + +E + L E+++ G+ D+ TY+ ++ + +
Sbjct: 73 DMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRS 132
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ A+ VL +M G+ P IVT +SL++ Y + +A+ L +QMVE KPD +T+T
Sbjct: 133 QLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFT 192
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
TL+ G K A+ + ++M GC+P++ T+ ++ RG + +++A
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAA 252
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
+ ++V +NT++ + +F EM+ G P T+N+LI+ G + A
Sbjct: 253 RIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDA 312
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
+ MLE + P++ T+NA++ A + G ++EK+ EM P+ +TY+ L++
Sbjct: 313 SRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLING 372
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
+ ++ + + + S + TL+ K + + F E +RG+ +
Sbjct: 373 FCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGN 432
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILR 423
T ++ + + + K M + + Y+ L++ + +I +
Sbjct: 433 TVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFK 492
Query: 424 EILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANS 483
+ + +E ++ YN +I C+ GK+ EA + + + PDVVTYNT ++ +
Sbjct: 493 YLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKR 549
Query: 484 MFGEAIGVVQCMIKQGCKPDQNTYNSIV-------DWYCKLHLREE--AYNFVHNLSSLD 534
+ EA + + M + G P+ TYN+++ D L +E + FV + S++
Sbjct: 550 LLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS 609
Query: 535 LHVSEEEKGRL 545
L + GRL
Sbjct: 610 LVTNMLHDGRL 620
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/493 (22%), Positives = 233/493 (47%), Gaps = 3/493 (0%)
Query: 31 EEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSL 90
++A++LF ++ + P +V +N LL K + + + + +QM++ G + TY+
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 91 ISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
I+ + R L AL + +M++ +PD+ T ++LL+G+ ++K+ A+ + ++M G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
KP+ TF LI +E + ++ C PD+VT+ T++ + G
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
+ +M+ A FNT+I + + + A ++ M G+ P++ TYN+++ L
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAV 330
G W + ++LS M + PN VT+++L+ A+ + + L EE+ I +
Sbjct: 305 NYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTI 364
Query: 331 LLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFM 390
L+ + L EA+ F + +I T N +++ + + K V ++ + M
Sbjct: 365 TYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM 424
Query: 391 YESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKM 450
+ G + Y +++ + + ++M+ ++++ + D+++Y+I+++ C GK+
Sbjct: 425 SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKL 484
Query: 451 TEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSI 510
A I ++ ++ YNT + GEA + + KPD TYN++
Sbjct: 485 DTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTM 541
Query: 511 VDWYCKLHLREEA 523
+ C L +EA
Sbjct: 542 ISGLCSKRLLQEA 554
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 108/471 (22%), Positives = 220/471 (46%), Gaps = 3/471 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L M G PD+ T ++L++ +A+ L +++ G +PD T+ L+
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ EA+ ++ QM RG P +VTY ++++ + G ++ AL L N+M IK +V
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVV 259
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
+ T++ + E+A+ +F EM T G +PN+ T+N+LI + G +++ ++ +
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ +P++VT+N L+ F + G E + +EM + P+ T+N LI+ +
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL 379
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
D+A+ ++K M+ P++ TYN ++ + E ++ EM N VTY+++
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439
Query: 301 LHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI 360
+ + + + + +++ S ++ T + L+ + L A F +K +
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499
Query: 361 PHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEM 420
+I N M+ G K K + + YN+++ R ++++
Sbjct: 500 ELNIFIYNTMIE--GMCK-AGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADD 556
Query: 421 ILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVT 471
+ R++ E G P+ +YN +I A R+ + ++ EM+ V D T
Sbjct: 557 LFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDAST 607
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/441 (22%), Positives = 202/441 (45%), Gaps = 42/441 (9%)
Query: 78 RGFPPSIVTYTSLISAYVRDGL-LEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDE 136
R F + Y ++ + D + +++A++L MV+ P + + LLS K E
Sbjct: 41 RSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFE 100
Query: 137 LAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLL 196
L + + E+M+T G ++ T++ I + R + V ++ PDIVT ++LL
Sbjct: 101 LVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLL 160
Query: 197 AVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVT 256
+ + S+ + +M G+ P+ TF TLI +A A+ +M++ G
Sbjct: 161 NGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQ 220
Query: 257 PDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNAL 316
PDL TY V+ L + G + + +L++ME R K N V +++++ +
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC----------- 269
Query: 317 AEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSL--- 373
K+ + A F E + +GI ++ T N++++
Sbjct: 270 ------------------------KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCN 305
Query: 374 YGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPD 433
YGR + +++L M E ++ +N+L+ + ++E + E++++ I+PD
Sbjct: 306 YGRW---SDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 434 LISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQ 493
I+YN++I +C + ++ EAK++ M +P++ TYNT + + + + + +
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 494 CMIKQGCKPDQNTYNSIVDWY 514
M ++G + TY +I+ +
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGF 443
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 142/280 (50%), Gaps = 3/280 (1%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M + + PD T+N LI+ + +EA ++F+ + P++ TYN L++ + K +
Sbjct: 353 EMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK 412
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
R ++ +E+ ++M RG + VTYT++I + + G + A + QMV + D+ TY+
Sbjct: 413 RVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYS 472
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
LL G + K + A+ +F+ ++ + + NI +N +I+ G E +F +
Sbjct: 473 ILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSI- 531
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
PD+VT+NT+++ L E +F++MK G +P T+NTLI A R +
Sbjct: 532 --KPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAAS 589
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLS 283
+ K M +G D ST + V L G L + +LS
Sbjct: 590 AELIKEMRSSGFVGDASTISLVTNMLHDGRLDKSFLNMLS 629
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/464 (28%), Positives = 234/464 (50%), Gaps = 12/464 (2%)
Query: 20 LISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRG 79
L+ + +AL +F + K +P TYN+++ + + + ++ EV +M + G
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG 227
Query: 80 --FPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDEL 137
FP +I TY++LIS+Y + G + A+ L ++M + ++P YTTLL + K E
Sbjct: 228 DCFPDTI-TYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEK 286
Query: 138 AMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLA 197
A+ +FEEM+ AGC P + T+ LIK G G E +K++ +PD+V N L+
Sbjct: 287 ALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMN 346
Query: 198 VFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISA-YSRCGSFDQARAVYKRMLEAGVT 256
+ G+ G E++ VF EM P ++NT+I A + + + + +M V+
Sbjct: 347 ILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVS 406
Query: 257 PDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNAL 316
P TY+ ++ + E++ +L EM+ P Y SL++A K +E N L
Sbjct: 407 PSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANEL 466
Query: 317 AEEIYS--GKITT--HAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLS 372
+E+ G +++ +AV++K K L+EA F E K +G D+ NA++S
Sbjct: 467 FKELKENFGNVSSRVYAVMIKHF----GKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMS 522
Query: 373 LYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEP 432
+ ++ + N +L+ M E+G + +N ++ +RT R++ + I GI+P
Sbjct: 523 GMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKP 582
Query: 433 DLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFV 476
D ++YN ++ + G EA R++ EMKD D +TY++ +
Sbjct: 583 DGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSIL 626
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 133/513 (25%), Positives = 232/513 (45%), Gaps = 9/513 (1%)
Query: 6 KSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEI---KLAGLRPDMVTYNALLDVYGKS 62
K + D T+ TLI C LY E +E+ + P +++ L+ G++
Sbjct: 118 KRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLS--ELVKALGRA 175
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMV-EKHIKPDVYT 121
+ +A+ V Q + R P+ TY S+I +++G E+ E+ +M E PD T
Sbjct: 176 KMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTIT 235
Query: 122 YTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK 181
Y+ L+S + +++ A+R+F+EM+ +P + L+ +Y G + +F+E+K
Sbjct: 236 YSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMK 295
Query: 182 ACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFD 241
CSP + T+ L+ G+ G E G +K+M R G P+ N L++ + G +
Sbjct: 296 RAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVE 355
Query: 242 QARAVYKRMLEAGVTPDLSTYNAVLAAL--ARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
+ V+ M TP + +YN V+ AL ++ + E S +M+ P+E TYS
Sbjct: 356 ELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSS-WFDKMKADSVSPSEFTYSI 414
Query: 300 LLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRG 359
L+ Y EK L EE+ +L+ K A F E K+
Sbjct: 415 LIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENF 474
Query: 360 IPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSE 419
M+ +G+ +++ + M G + YN+LM + ++
Sbjct: 475 GNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEAN 534
Query: 420 MILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATY 479
+LR++ E G D+ S+NI++ + R G A + +K PD VTYNT + +
Sbjct: 535 SLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCF 594
Query: 480 AANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
A MF EA +++ M +G + D TY+SI+D
Sbjct: 595 AHAGMFEEAARMMREMKDKGFEYDAITYSSILD 627
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 214/444 (48%), Gaps = 10/444 (2%)
Query: 6 KSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAG-LRPDMVTYNALLDVYGKSRR 64
K + P T+N++I +E+ E++ E+ G PD +TY+AL+ Y K R
Sbjct: 189 KGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGR 248
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
A+ + +M+ P+ YT+L+ Y + G +E+AL+L +M P VYTYT
Sbjct: 249 NDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTE 308
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
L+ G A + + A +++M G P++ N L+ + G G E+ VF E+ +
Sbjct: 309 LIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWR 368
Query: 185 CSPDIVTWNTLL-AVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
C+P +V++NT++ A+F SEVS F +MK P T++ LI Y + ++A
Sbjct: 369 CTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKA 428
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
+ + M E G P + Y +++ AL + +E + ++ E++ + Y+ ++
Sbjct: 429 LLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKH 488
Query: 304 YAN-GKEFEKMNALAEEIYSGK---ITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRG 359
+ GK E ++ E G + + L+ +V K + EA + ++ G
Sbjct: 489 FGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMV----KAGMINEANSLLRKMEENG 544
Query: 360 IPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSE 419
DI + N +L+ + R + + ++ + + SG YN+L+ + F ++
Sbjct: 545 CRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAA 604
Query: 420 MILREILEKGIEPDLISYNIVIYA 443
++RE+ +KG E D I+Y+ ++ A
Sbjct: 605 RMMREMKDKGFEYDAITYSSILDA 628
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 156/304 (51%), Gaps = 1/304 (0%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
DM GL PD+ N L++ EE +F E+ + P +V+YN ++ +S+
Sbjct: 328 DMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESK 387
Query: 64 -RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
E +M++ PS TY+ LI Y + +E+AL L +M EK P Y
Sbjct: 388 AHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAY 447
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
+L++ AK+ E A +F+E++ + + +IK +G G +E +F E+K
Sbjct: 448 CSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKN 507
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
PD+ +N L++ + G+ +E + + ++M+ G + + N +++ ++R G +
Sbjct: 508 QGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRR 567
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
A +++ + +G+ PD TYN +L A G++E++ +++ EM++ + + +TYSS+L
Sbjct: 568 AIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILD 627
Query: 303 AYAN 306
A N
Sbjct: 628 AVGN 631
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 175/400 (43%), Gaps = 36/400 (9%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV 71
PD T++ LIS + A+ LF+E+K ++P Y LL +Y K + ++A+++
Sbjct: 231 PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290
Query: 72 LKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVN 131
++M+ G P++ TYT LI + G ++EA M+ + PDV L++
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350
Query: 132 AKKDELAMRVFEEMRTAGCKPNICTFNALIK-MYGDRGMFAEMGKVFKEIKACQCSPDIV 190
+ E VF EM C P + ++N +IK ++ + +E+ F ++KA SP
Sbjct: 351 VGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEF 410
Query: 191 TWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISA----------------- 233
T++ L+ + + + + +EM GF P + +LI+A
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKEL 470
Query: 234 ------------------YSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLW 275
+ +CG +A ++ M G PD+ YNA+++ + + G+
Sbjct: 471 KENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMI 530
Query: 276 EQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTL 335
++ +L +ME C+ + +++ +L+ +A + + E I I V TL
Sbjct: 531 NEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTL 590
Query: 336 VLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYG 375
+ + EA E K +G +D T +++L G
Sbjct: 591 LGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVG 630
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 105/200 (52%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +M +G P + +LI+ YE A ELF+E+K Y ++ +G
Sbjct: 431 LLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFG 490
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K + EA+++ +M+++G P + Y +L+S V+ G++ EA L +M E + D+
Sbjct: 491 KCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADIN 550
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
++ +L+GF A+ +FE ++ +G KP+ T+N L+ + GMF E ++ +E+
Sbjct: 551 SHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREM 610
Query: 181 KACQCSPDIVTWNTLLAVFG 200
K D +T++++L G
Sbjct: 611 KDKGFEYDAITYSSILDAVG 630
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+MK+QG PD+ +N L+S + EA L +++ G R D+ ++N +L+ + ++
Sbjct: 504 EMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTG 563
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
P+ A+E+ + ++ G P VTY +L+ + G+ EEA + +M +K + D TY+
Sbjct: 564 VPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYS 623
Query: 124 TLLS--GFVNAKKDELA 138
++L G V+ +KD+++
Sbjct: 624 SILDAVGNVDHEKDDVS 640
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
M +K G+ PD T+NTL+ C ++EEA + E+K G D +TY+++LD G
Sbjct: 571 MFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVG 630
Query: 61 KSRRPKE 67
K+
Sbjct: 631 NVDHEKD 637
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 110/332 (33%), Positives = 176/332 (53%), Gaps = 5/332 (1%)
Query: 2 LMDMKSQ-GLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+ +M +Q G PD TFNTL++ C+AG + + A+E+ + + G PD+ TYN+++
Sbjct: 282 IQEMSNQDGFFPDQYTFNTLVNGLCKAGHV-KHAIEIMDVMLQEGYDPDVYTYNSVISGL 340
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
K KEA+EVL QM +R P+ VTY +LIS ++ +EEA EL + K I PDV
Sbjct: 341 CKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDV 400
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
T+ +L+ G + +AM +FEEMR+ GC+P+ T+N LI +G E + K+
Sbjct: 401 CTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 460
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
++ C+ ++T+NTL+ F + E +F EM+ G T+NTLI +
Sbjct: 461 MELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRR 520
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
+ A + +M+ G PD TYN++L RGG +++ ++ M + C+P+ VTY +
Sbjct: 521 VEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGT 580
Query: 300 LLHAYANGKEFEKMNALAEEIYSGKI--TTHA 329
L+ E + L I I T HA
Sbjct: 581 LISGLCKAGRVEVASKLLRSIQMKGINLTPHA 612
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 134/505 (26%), Positives = 246/505 (48%), Gaps = 15/505 (2%)
Query: 20 LISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQM-ESR 78
L+ R+GS +++ ++ E++K + T+ L++ Y + E + V+ M +
Sbjct: 90 LLRLGRSGS-FDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEF 148
Query: 79 GFPPSIVTYTSLISAYVRDGLLEEALELKN-QMVEKHIKPDVYTYTTLLSGFVNAKKDEL 137
G P Y +++ V DG + +E+ + +M IKPDV T+ L+ A +
Sbjct: 149 GLKPDTHFYNRMLNLLV-DGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRP 207
Query: 138 AMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLA 197
A+ + E+M + G P+ TF +++ Y + G ++ +++ CS V+ N ++
Sbjct: 208 AILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVH 267
Query: 198 VFGQNGLDSEVSGVFKEMK-RAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVT 256
F + G + +EM + GF P++ TFNTL++ + G A + ML+ G
Sbjct: 268 GFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD 327
Query: 257 PDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNAL 316
PD+ TYN+V++ L + G +++ +VL +M C PN VTY++L+ + E+ L
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387
Query: 317 AEEIYSGKI----TTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAML- 371
A + S I T L++ L L + A F E + +G D T N ++
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRNH----RVAMELFEEMRSKGCEPDEFTYNMLID 443
Query: 372 SLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIE 431
SL + KL N +LK M SG S+ YN+L+ + R++E I E+ G+
Sbjct: 444 SLCSKGKLDEALN-MLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVS 502
Query: 432 PDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGV 491
+ ++YN +I C++ ++ +A +++++M PD TYN+ + + +A +
Sbjct: 503 RNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADI 562
Query: 492 VQCMIKQGCKPDQNTYNSIVDWYCK 516
VQ M GC+PD TY +++ CK
Sbjct: 563 VQAMTSNGCEPDIVTYGTLISGLCK 587
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 137/542 (25%), Positives = 251/542 (46%), Gaps = 8/542 (1%)
Query: 5 MKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M G+ PD+ TFN LI + CRA L A+ + E++ GL PD T+ ++ Y +
Sbjct: 180 MSVWGIKPDVSTFNVLIKALCRAHQL-RPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG 238
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKH-IKPDVYTY 122
A+ + +QM G S V+ ++ + ++G +E+AL +M + PD YT+
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTF 298
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
TL++G A + A+ + + M G P++ T+N++I G E +V ++
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT 358
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
CSP+ VT+NTL++ + E + + + + G +P+ TFN+LI +
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV 418
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
A +++ M G PD TYN ++ +L G +++ +L +ME C + +TY++L+
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Query: 303 AYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPH 362
+ + + + +E+ ++ ++V TL+ K + +A + G
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538
Query: 363 DITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMIL 422
D T N++L+ + R + K I++ M +G + Y +L+ + + +L
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL 598
Query: 423 REILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEM--KDPAPVPDVVTYN-TFVATY 479
R I KGI +YN VI R K TEA + EM ++ AP PD V+Y F
Sbjct: 599 RSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP-PDAVSYRIVFRGLC 657
Query: 480 AANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSE 539
EA+ + ++++G P+ ++ + + L + E V N+ SE
Sbjct: 658 NGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLV-NMVMQKARFSE 716
Query: 540 EE 541
EE
Sbjct: 717 EE 718
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 143/308 (46%), Gaps = 1/308 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L M ++ +P+ T+NTLIS + EEA EL + G+ PD+ T+N+L+
Sbjct: 352 VLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+R + AME+ ++M S+G P TY LI + G L+EAL + QM V
Sbjct: 412 LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI 471
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY TL+ GF A K A +F+EM G N T+N LI + ++ ++
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
PD T+N+LL F + G + + + + M G P+ T+ TLIS + G
Sbjct: 532 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM-ENGRCKPNEVTYSS 299
+ A + + + G+ YN V+ L R ++ + EM E P+ V+Y
Sbjct: 592 EVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRI 651
Query: 300 LLHAYANG 307
+ NG
Sbjct: 652 VFRGLCNG 659
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/382 (20%), Positives = 164/382 (42%), Gaps = 37/382 (9%)
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
SP+ + +L G++G ++ + ++MK + TF LI +Y++ D+ +
Sbjct: 80 SPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILS 139
Query: 246 V----------------YKRMLEA--------------------GVTPDLSTYNAVLAAL 269
V Y RML G+ PD+ST+N ++ AL
Sbjct: 140 VVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKAL 199
Query: 270 ARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHA 329
R + +L +M + P+E T+++++ Y + + + E++ +
Sbjct: 200 CRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSN 259
Query: 330 VLLKTLVLVNSKFDFLAEAEHAFLEFKKR-GIPHDITTLNAMLSLYGRKKLVAKTNKILK 388
V + +V K + +A + E + G D T N +++ + V +I+
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 389 FMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNG 448
M + G+ + YNS++ + +++ +L +++ + P+ ++YN +I C+
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 449 KMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYN 508
++ EA + + +PDV T+N+ + A+ + + M +GC+PD+ TYN
Sbjct: 380 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYN 439
Query: 509 SIVDWYCKLHLREEAYNFVHNL 530
++D C +EA N + +
Sbjct: 440 MLIDSLCSKGKLDEALNMLKQM 461
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 131/286 (45%), Gaps = 12/286 (4%)
Query: 256 TPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNA 315
+P+ + Y +L L R G ++ +K+L +M++ RC+ T+ L+ +YA +FE +
Sbjct: 80 SPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYA---QFELQDE 136
Query: 316 LAEEI------YSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNA 369
+ + + K TH +LV+ L E HA + GI D++T N
Sbjct: 137 ILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHA--KMSVWGIKPDVSTFNV 194
Query: 370 MLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKG 429
++ R + +L+ M G + ++M + + + I +++E G
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 430 IEPDLISYNIVIYAYCRNGKMTEAKRILNEMKD-PAPVPDVVTYNTFVATYAANSMFGEA 488
+S N++++ +C+ G++ +A + EM + PD T+NT V A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314
Query: 489 IGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLD 534
I ++ M+++G PD TYNS++ CKL +EA + + + D
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD 360
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 128/527 (24%), Positives = 234/527 (44%), Gaps = 35/527 (6%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
M+ +M +P ++L+ R EEAL L + + G+ P++ YNAL+D
Sbjct: 319 MMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC 378
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K R+ EA + +M G P+ VTY+ LI + R G L+ AL +MV+ +K VY
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
Y +L++G A EM +P + T+ +L+ Y +G + +++ E+
Sbjct: 439 PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+P I T+ TLL+ + GL + +F EM P R T+N +I Y G
Sbjct: 499 TGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDM 558
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
+A K M E G+ PD +Y ++ L G +++ + + G C+ NE+ Y+ L
Sbjct: 559 SKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGL 618
Query: 301 LHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI 360
LH + + E+ ++ +E+ +RG+
Sbjct: 619 LHGFCREGKLEEALSVCQEMV-----------------------------------QRGV 643
Query: 361 PHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEM 420
D+ ++ + K +LK M++ G Y S++ S+T +F+++
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703
Query: 421 ILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYA 480
I ++ +G P+ ++Y VI C+ G + EA+ + ++M+ + VP+ VTY F+
Sbjct: 704 IWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILT 763
Query: 481 ANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFV 527
+ + + I +G + TYN ++ +C+ EEA +
Sbjct: 764 KGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELI 810
Score = 181 bits (460), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 131/549 (23%), Positives = 239/549 (43%), Gaps = 35/549 (6%)
Query: 10 LAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAM 69
L P++ T + L+ + A+ELF ++ G+RPD+ Y ++ + + A
Sbjct: 188 LLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAK 247
Query: 70 EVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGF 129
E++ ME+ G +IV Y LI + + EA+ +K + K +KPDV TY TL+ G
Sbjct: 248 EMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGL 307
Query: 130 VNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDI 189
++ E+ + + +EM P+ ++L++ RG E + K + SP++
Sbjct: 308 CKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNL 367
Query: 190 VTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKR 249
+N L+ + E +F M + G P T++ LI + R G D A +
Sbjct: 368 FVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGE 427
Query: 250 MLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKE 309
M++ G+ + YN+++ + G +E ++EM N + +P VTY+SL+ Y + +
Sbjct: 428 MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487
Query: 310 FEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNA 369
K L E+ I TL+ + + +A F E + + + T N
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547
Query: 370 MLSLYGRKKLVAKTNKILKFMYESGFT------------LSLPG---------------- 401
M+ Y + ++K + LK M E G L L G
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607
Query: 402 -------YNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAK 454
Y L++ R ++ + +E++++G++ DL+ Y ++I ++
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF 667
Query: 455 RILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWY 514
+L EM D PD V Y + + + F EA G+ MI +GC P++ TY ++++
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727
Query: 515 CKLHLREEA 523
CK EA
Sbjct: 728 CKAGFVNEA 736
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 137/543 (25%), Positives = 241/543 (44%), Gaps = 55/543 (10%)
Query: 9 GLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEA 68
G++P+L +N LI G + EA LF+ + GLRP+ VTY+ L+D++ + + A
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421
Query: 69 MEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSG 128
+ L +M G S+ Y SLI+ + + G + A +M+ K ++P V TYT+L+ G
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
Query: 129 FVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPD 188
+ + K A+R++ EM G P+I TF L+ G+ + K+F E+ P+
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541
Query: 189 IVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISA--------------- 233
VT+N ++ + + G S+ KEM G VP+ ++ LI
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601
Query: 234 --------------------YSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGG 273
+ R G ++A +V + M++ GV DL Y L G
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCY----GVLIDGS 657
Query: 274 LWEQSEKV----LSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHA 329
L + K+ L EM + KP++V Y+S++ A + +F++ + + + + +
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717
Query: 330 VLLKTLVLVNSKFDFLAEAEHAFLEFKK-RGIPHDITTLNAMLSLYGR-----KKLVAKT 383
V ++ K F+ EAE + + +P+ +T L + + +K V
Sbjct: 718 VTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVT-YGCFLDILTKGEVDMQKAVELH 776
Query: 384 NKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYA 443
N ILK G + YN L+ R ++ ++ ++ G+ PD I+Y +I
Sbjct: 777 NAILK-----GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINE 831
Query: 444 YCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPD 503
CR + +A + N M + PD V YNT + G+A + M++QG P+
Sbjct: 832 LCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Query: 504 QNT 506
T
Sbjct: 892 NKT 894
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 209/474 (44%), Gaps = 37/474 (7%)
Query: 2 LMDMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ +M ++ L P + T+ +L+ C G + +AL L+ E+ G+ P + T+ LL
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKI-NKALRLYHEMTGKGIAPSIYTFTTLLSGLF 518
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
++ ++A+++ +M P+ VTY +I Y +G + +A E +M EK I PD Y
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTY 578
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
+Y L+ G + A + + C+ N + L+ + G E V +E+
Sbjct: 579 SYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEM 638
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
D+V + L+ ++ G+ KEM G P+ + ++I A S+ G F
Sbjct: 639 VQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDF 698
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
+A ++ M+ G P+ TY AV+ L + G ++E + S+M+ PN+VTY
Sbjct: 699 KEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCF 758
Query: 301 LHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI 360
L G E + A + H +LK G+
Sbjct: 759 LDILTKG-EVDMQKA---------VELHNAILK-------------------------GL 783
Query: 361 PHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEM 420
+ T N ++ + R+ + + ++++ M G + Y +++ R + +K+
Sbjct: 784 LANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIE 843
Query: 421 ILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNT 474
+ + EKGI PD ++YN +I+ C G+M +A + NEM +P+ T T
Sbjct: 844 LWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/470 (21%), Positives = 211/470 (44%), Gaps = 38/470 (8%)
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDG-LLEEALELKNQMVEKHIKPDVYTY 122
+P + VL + S ++ LI YVR +L+ L K + + + P+V T
Sbjct: 136 KPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTL 195
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
+ LL G V + LAM +F +M + G +P++ + +I+ + + ++ ++A
Sbjct: 196 SALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEA 255
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
C +IV +N L+ + E G+ K++ P+ T+ TL+ + F+
Sbjct: 256 TGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEI 315
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
+ ML +P + ++++ L + G E++ ++ + + PN Y++L+
Sbjct: 316 GLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALID 375
Query: 303 AYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI-P 361
+ G++F EAE F K G+ P
Sbjct: 376 SLCKGRKFH-----------------------------------EAELLFDRMGKIGLRP 400
Query: 362 HDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMI 421
+D+T + ++ ++ R+ + L M ++G LS+ YNSL+ H + + +E
Sbjct: 401 NDVT-YSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGF 459
Query: 422 LREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAA 481
+ E++ K +EP +++Y ++ YC GK+ +A R+ +EM P + T+ T ++
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFR 519
Query: 482 NSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLS 531
+ +A+ + M + KP++ TYN +++ YC+ +A+ F+ ++
Sbjct: 520 AGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 8 QGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPK 66
+GL + T+N LI CR G + EEA EL + G+ PD +TY +++ + K
Sbjct: 781 KGLLANTATYNMLIRGFCRQGRI-EEASELITRMIGDGVSPDCITYTTMINELCRRNDVK 839
Query: 67 EAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLL 126
+A+E+ M +G P V Y +LI G + +A EL+N+M+ + + P+ T T
Sbjct: 840 KAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTT 899
Query: 127 SGFVNAK 133
S ++K
Sbjct: 900 SNDTSSK 906
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 101/247 (40%)
Query: 292 PNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHA 351
P T S+LLH + F L ++ S I + ++ + L+ A+
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 352 FLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSR 411
+ G +I N ++ +K+ V + I K + + Y +L+Y +
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 412 TRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVT 471
+ F ++ E+L P + + ++ + GK+ EA ++ + D P++
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 472 YNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLS 531
YN + + F EA + M K G +P+ TY+ ++D +C+ + A +F+ +
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 532 SLDLHVS 538
L +S
Sbjct: 430 DTGLKLS 436
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 69/150 (46%)
Query: 403 NSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKD 462
++L++ + R+F + + +++ GI PD+ Y VI + C ++ AK ++ M+
Sbjct: 196 SALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEA 255
Query: 463 PAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREE 522
++V YN + EA+G+ + + + KPD TY ++V CK+ E
Sbjct: 256 TGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEI 315
Query: 523 AYNFVHNLSSLDLHVSEEEKGRLLERIAEK 552
+ + L SE L+E + ++
Sbjct: 316 GLEMMDEMLCLRFSPSEAAVSSLVEGLRKR 345
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 120/500 (24%), Positives = 226/500 (45%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M+ +G+ PDL ++TLI + +LF + G++ D+V +++ +DVY KS
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
A V K+M +G P++VTYT LI +DG + EA + Q++++ ++P + TY++
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
L+ GF ++E+M G P++ + L+ +G+ + ++
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
++V +N+L+ + + E VF+ M G P+ TF T++ G ++A
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEAL 551
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
++ RM + G+ PD Y ++ A + ++ M+ + + + ++H
Sbjct: 552 FLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 611
Query: 305 ANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDI 364
E + + GK+ V T++ L EAE F K +
Sbjct: 612 FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNT 671
Query: 365 TTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILRE 424
TL ++ + + + ++ M E G + Y LM S++ + S + E
Sbjct: 672 VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE 731
Query: 425 ILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSM 484
+ EKGI P ++SY+I+I C+ G++ EA I ++ D +PDVV Y + Y
Sbjct: 732 MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGR 791
Query: 485 FGEAIGVVQCMIKQGCKPDQ 504
EA + + M++ G KPD
Sbjct: 792 LVEAALLYEHMLRNGVKPDD 811
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/486 (23%), Positives = 226/486 (46%), Gaps = 3/486 (0%)
Query: 32 EALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKE-AMEVLKQMESRGFPPSIVTYTSL 90
+AL+ + G R +V+ N +L G S E A +L + G P++VT+ +L
Sbjct: 235 KALDFHRLVMERGFRVGIVSCNKVLK--GLSVDQIEVASRLLSLVLDCGPAPNVVTFCTL 292
Query: 91 ISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
I+ + + G ++ A +L M ++ I+PD+ Y+TL+ G+ A + ++F + G
Sbjct: 293 INGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGV 352
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
K ++ F++ I +Y G A V+K + SP++VT+ L+ Q+G E G
Sbjct: 353 KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFG 412
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
++ ++ + G P T+++LI + +CG+ A+Y+ M++ G PD+ Y ++ L+
Sbjct: 413 MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLS 472
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAV 330
+ GL + + +M + N V ++SL+ + F++ + + I
Sbjct: 473 KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVA 532
Query: 331 LLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFM 390
T++ V+ L EA F K G+ D ++ + + ++ M
Sbjct: 533 TFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM 592
Query: 391 YESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKM 450
+ + + N +++L + + ++E +EPD+++YN +I YC ++
Sbjct: 593 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 652
Query: 451 TEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSI 510
EA+RI +K P+ VT + N+ AI + M ++G KP+ TY +
Sbjct: 653 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 712
Query: 511 VDWYCK 516
+DW+ K
Sbjct: 713 MDWFSK 718
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 163/376 (43%), Gaps = 3/376 (0%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
DM G PD+ + L+ L A+ ++ +R ++V +N+L+D + +
Sbjct: 451 DMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLN 510
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
R EA++V + M G P + T+T+++ + +G LEEAL L +M + ++PD Y
Sbjct: 511 RFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYC 570
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
TL+ F K + +++F+ M+ +I N +I + + K F +
Sbjct: 571 TLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 630
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
+ PDIVT+NT++ + E +F+ +K F P T LI + D A
Sbjct: 631 KMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGA 690
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
++ M E G P+ TY ++ ++ E S K+ EM+ P+ V+YS ++
Sbjct: 691 IRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDG 750
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI-PH 362
++ + + K+ V L+ K L EA + + G+ P
Sbjct: 751 LCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Query: 363 DITTLNAMLSLYGRKK 378
D+ L LS Y K
Sbjct: 811 DL--LQRALSEYNPPK 824
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
M M +G P+ T+ L+ E + +LFEE++ G+ P +V+Y+ ++D
Sbjct: 693 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 752
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPD 118
K R EA + Q P +V Y LI Y + G L EA L M+ +KPD
Sbjct: 753 KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 152/602 (25%), Positives = 266/602 (44%), Gaps = 77/602 (12%)
Query: 5 MKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLA-GLRPDMVTYNALLDVYGKS 62
M S ++PD+ T + +++ CR+G++ ++A+ +E + + GL ++VTYN+L++ Y
Sbjct: 216 MISFEVSPDVFTCSIVVNAYCRSGNV-DKAMVFAKETESSLGLELNVVTYNSLINGYAMI 274
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
+ VL+ M RG ++VTYTSLI Y + GL+EEA + + EK + D + Y
Sbjct: 275 GDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMY 334
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
L+ G+ + A+RV + M G + N N+LI Y G E ++F +
Sbjct: 335 GVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMND 394
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
PD T+NTL+ + + G E + +M + VP T+N L+ YSR G+F
Sbjct: 395 WSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHD 454
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGG-------LWE------------------- 276
+++K ML+ GV D + + +L AL + G LWE
Sbjct: 455 VLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMIS 514
Query: 277 ---------QSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITT 327
+++++L + RCKP TY +L H Y ++ A+ E + I
Sbjct: 515 GLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFP 574
Query: 328 HAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKIL 387
+ TL+ K+ L + +E + RG+ + T A+++ + ++ K
Sbjct: 575 TIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATC 634
Query: 388 KFMYESGFTLS---------------------------------LPGYNSLM-YLHSRTR 413
M E G TL+ LPGY SL +L +
Sbjct: 635 FEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASAT 694
Query: 414 NFRKSEMILREI----LEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEM-KDPAPVPD 468
K++ I + +K + P+ I YN+ I C+ GK+ +A+++ +++ +PD
Sbjct: 695 TCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPD 754
Query: 469 VVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVH 528
TY + A +A + M +G P+ TYN+++ CKL + A +H
Sbjct: 755 EYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLH 814
Query: 529 NL 530
L
Sbjct: 815 KL 816
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/488 (23%), Positives = 220/488 (45%), Gaps = 49/488 (10%)
Query: 29 LYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYT 88
++ E + +F+E + DM+ L VY + K A+ V M + G PS+++
Sbjct: 140 VWGELVRVFKEFSFSPTVFDMI-----LKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCN 194
Query: 89 SLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTA 148
SL+S VR G AL + +QM+ + PDV+T + +++ + + + AM +E ++
Sbjct: 195 SLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESS 254
Query: 149 -GCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSE 207
G + N+ T+N+LI Y G M +V + + S ++VT+ +L+ + + GL E
Sbjct: 255 LGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEE 314
Query: 208 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLA 267
VF+ +K V ++ + L+ Y R G A V+ M+E GV + + N+++
Sbjct: 315 AEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLIN 374
Query: 268 ALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKIT- 326
+ G ++E++ S M + KP+ TY++L+ Y ++ L +++ ++
Sbjct: 375 GYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVP 434
Query: 327 ---THAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKT 383
T+ +LLK + + G HD+ +L M+ G
Sbjct: 435 TVMTYNILLKG--------------------YSRIGAFHDVLSLWKMMLKRGVNADEISC 474
Query: 384 NKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYA 443
+ +L+ +++ G +F ++ + +L +G+ D I+ N++I
Sbjct: 475 STLLEALFKLG-------------------DFNEAMKLWENVLARGLLTDTITLNVMISG 515
Query: 444 YCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPD 503
C+ K+ EAK IL+ + P V TY Y EA V + M ++G P
Sbjct: 516 LCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPT 575
Query: 504 QNTYNSIV 511
YN+++
Sbjct: 576 IEMYNTLI 583
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 120/521 (23%), Positives = 220/521 (42%), Gaps = 46/521 (8%)
Query: 4 DMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
+M G+ + N+LI+ C++G L E A ++F + L+PD TYN L+D Y ++
Sbjct: 356 NMIEIGVRTNTTICNSLINGYCKSGQLVE-AEQIFSRMNDWSLKPDHHTYNTLVDGYCRA 414
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
EA+++ QM + P+++TY L+ Y R G + L L M+++ + D +
Sbjct: 415 GYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISC 474
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
+TLL AM+++E + G + T N +I E ++ +
Sbjct: 475 STLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNI 534
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
+C P + T+ L + + G E V + M+R G P E +NTLIS + ++
Sbjct: 535 FRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNK 594
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
+ + G+TP ++TY A++ G+ +++ EM N S +
Sbjct: 595 VADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKI-- 652
Query: 303 AYANGKEFEKMNALAEEIYS-GKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEF------ 355
A ++ KI +LL+ +V FD L + EF
Sbjct: 653 --------------ANSLFRLDKIDEACLLLQKIV----DFDLLLPGYQSLKEFLEASAT 694
Query: 356 -----------------KKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLS 398
KK +P++I A+ L KL + F
Sbjct: 695 TCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPD 754
Query: 399 LPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILN 458
Y L++ + + K+ + E+ KGI P++++YN +I C+ G + A+R+L+
Sbjct: 755 EYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLH 814
Query: 459 EMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQG 499
++ P+ +TYNT + + EA+ + + MI++G
Sbjct: 815 KLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG 855
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 157/350 (44%), Gaps = 41/350 (11%)
Query: 169 MFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFN 228
++ E+ +VFKE SP + ++ +L V+ + GL VF M G +P + N
Sbjct: 140 VWGELVRVFKEFSF---SPTV--FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCN 194
Query: 229 TLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENG 288
+L+S R G A VY +M+ V+PD+ T + V+ A R G +++ E E+
Sbjct: 195 SLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESS 254
Query: 289 -RCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAE 347
+ N VTY+SL++ YA + E M + L L++
Sbjct: 255 LGLELNVVTYNSLINGYAMIGDVEGMT------------------RVLRLMS-------- 288
Query: 348 AEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMY 407
+RG+ ++ T +++ Y +K L+ + + + + E Y LM
Sbjct: 289 ---------ERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMD 339
Query: 408 LHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVP 467
+ RT R + + ++E G+ + N +I YC++G++ EA++I + M D + P
Sbjct: 340 GYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKP 399
Query: 468 DVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKL 517
D TYNT V Y EA+ + M ++ P TYN ++ Y ++
Sbjct: 400 DHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRI 449
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 183/431 (42%), Gaps = 41/431 (9%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M +G+ D + +TL+ + EA++L+E + GL D +T N ++ K +
Sbjct: 462 MLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEK 521
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
EA E+L + P++ TY +L Y + G L+EA +K M K I P + Y T
Sbjct: 522 VNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNT 581
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEM-GKVFKEI-KA 182
L+SG + + E+R G P + T+ ALI + + GM + F+ I K
Sbjct: 582 LISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKG 641
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
+ +I + ++F + +D + K + +P ++ + A + Q
Sbjct: 642 ITLNVNICS-KIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQ 700
Query: 243 --ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM-ENGRCKPNEVTYSS 299
A +V + + P+ YN +A L + G E + K+ S++ + R P+E TY+
Sbjct: 701 KIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTI 760
Query: 300 LLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRG 359
L+H A + K L +E+ +G
Sbjct: 761 LIHGCAIAGDINKAFTLRDEM-----------------------------------ALKG 785
Query: 360 IPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSE 419
I +I T NA++ + V + ++L + + G T + YN+L+ ++ N ++
Sbjct: 786 IIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAM 845
Query: 420 MILREILEKGI 430
+ +++EKG+
Sbjct: 846 RLKEKMIEKGL 856
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 113/260 (43%), Gaps = 39/260 (15%)
Query: 1 MLMDMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEI------------KLAG--- 44
++++++++GL P + T+ LI+ C G + + FE I K+A
Sbjct: 598 LVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLF 657
Query: 45 ----------LRPDMVTYNALLDVYGKSRRPKEA-----MEVLKQMES-------RGFPP 82
L +V ++ LL Y + EA ++ K ES + P
Sbjct: 658 RLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVP 717
Query: 83 SIVTYTSLISAYVRDGLLEEALELKNQMVEK-HIKPDVYTYTTLLSGFVNAKKDELAMRV 141
+ + Y I+ + G LE+A +L + ++ PD YTYT L+ G A A +
Sbjct: 718 NNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTL 777
Query: 142 FEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQ 201
+EM G PNI T+NALIK G ++ ++ +P+ +T+NTL+ +
Sbjct: 778 RDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVK 837
Query: 202 NGLDSEVSGVFKEMKRAGFV 221
+G +E + ++M G V
Sbjct: 838 SGNVAEAMRLKEKMIEKGLV 857
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 117/291 (40%), Gaps = 39/291 (13%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M+ +G+ P + +NTLIS + +L E++ GL P + TY AL+ +
Sbjct: 567 MERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGM 626
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVE------------ 112
+A +M +G ++ + + ++ R ++EA L ++V+
Sbjct: 627 IDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLK 686
Query: 113 --------------------------KHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMR 146
K + P+ Y ++G A K E A ++F ++
Sbjct: 687 EFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLL 746
Query: 147 TAG-CKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLD 205
++ P+ T+ LI G + + E+ P+IVT+N L+ + G
Sbjct: 747 SSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNV 806
Query: 206 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVT 256
+ ++ + G P T+NTLI + G+ +A + ++M+E G+
Sbjct: 807 DRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 185 bits (469), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 126/543 (23%), Positives = 248/543 (45%), Gaps = 9/543 (1%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV 71
P + FN L+S + ++ + L E ++ + D+ +YN L++ + + + A+ V
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 72 LKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVN 131
L +M G+ P IVT +SL++ Y + EA+ L +QM +P+ T+ TL+ G
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 132 AKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVT 191
K A+ + + M GC+P++ T+ ++ RG + K+++ + D+V
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 192 WNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRML 251
+ T++ ++ +F EM G P T+N+LI G + A + M+
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 252 EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE 311
E + P++ T++A++ A + G ++EK+ EM P+ TYSSL++ + +
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 312 KMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAML 371
+ + E + S + V TL+ K + E F E +RG+ + T N ++
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 372 SLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIE 431
+ KI K M G + Y+ L+ + K+ ++ + + +E
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 432 PDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGV 491
PD+ +YNI+I C+ GK+ + + + P+V+ Y T ++ + + EA +
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 557
Query: 492 VQCMIKQGCKPDQNTYNSIV-------DWYCKLHLREE--AYNFVHNLSSLDLHVSEEEK 542
+ M + G P+ TYN+++ D L +E + FV + S++ + ++
Sbjct: 558 FREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHD 617
Query: 543 GRL 545
GRL
Sbjct: 618 GRL 620
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 228/473 (48%), Gaps = 2/473 (0%)
Query: 5 MKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M++ ++ DL ++N LI+C CR L AL + ++ G PD+VT ++LL+ Y +
Sbjct: 106 MQNLRISYDLYSYNILINCFCRRSQL-PLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGK 164
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
R EA+ ++ QM + P+ VT+ +LI EA+ L ++MV + +PD++TY
Sbjct: 165 RISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 224
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
T+++G +LA+ + ++M + ++ + +I + + +F E+
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 284
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
P++VT+N+L+ G S+ S + +M P TF+ LI A+ + G +A
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
+Y M++ + PD+ TY++++ ++++ + M + C PN VTY++L+
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
+ K E+ L E+ + + V TL+ + A+ F + G+P D
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILR 423
I T + +L + + K + +++ +S + YN ++ + +
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524
Query: 424 EILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFV 476
+ KG++P++I Y +I +CR G EA + EMK+ +P+ TYNT +
Sbjct: 525 SLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 115/494 (23%), Positives = 239/494 (48%), Gaps = 2/494 (0%)
Query: 31 EEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSL 90
++A++LF E+ + P +V +N LL K + + + ++M++ + +Y L
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121
Query: 91 ISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
I+ + R L AL + +M++ +PD+ T ++LL+G+ + K+ A+ + ++M
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
+PN TFN LI +E + + A C PD+ T+ T++ + G
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
+ K+M++ + + T+I A + + A ++ M G+ P++ TYN+++ L
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAV 330
G W + ++LS+M + PN VT+S+L+ A+ + + L +E+ I
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 331 LLKTLVLVNSKFDFLAEAEHAF-LEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKF 389
+L+ D L EA+H F L K P+ + T N ++ + + K V + ++ +
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPN-VVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 390 MYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGK 449
M + G + YN+L+ + + ++ I ++++ G+ PD+I+Y+I++ C+ GK
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Query: 450 MTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNS 509
+ +A + ++ PD+ TYN + + + + +G KP+ Y +
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540
Query: 510 IVDWYCKLHLREEA 523
++ +C+ L+EEA
Sbjct: 541 MISGFCRKGLKEEA 554
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 193/379 (50%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L M+ + D+ + T+I +AL LF E+ G+RP++VTYN+L+
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
R +A +L M R P++VT+++LI A+V++G L EA +L ++M+++ I PD++
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY++L++GF + + A +FE M + C PN+ T+N LIK + E ++F+E+
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ VT+NTL+ Q G +FK+M G P+ T++ L+ + G
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
++A V++ + ++ + PD+ TYN ++ + + G E + + KPN + Y+++
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM 541
Query: 301 LHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI 360
+ + E+ +AL E+ ++ TL+ + A + E + G
Sbjct: 542 ISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGF 601
Query: 361 PHDITTLNAMLSLYGRKKL 379
D +T++ ++++ +L
Sbjct: 602 VGDASTISMVINMLHDGRL 620
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/482 (23%), Positives = 224/482 (46%), Gaps = 5/482 (1%)
Query: 50 VTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQ 109
++ N LLD+ + +A+++ +M PSIV + L+SA + + + L +
Sbjct: 51 LSRNVLLDL-----KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGER 105
Query: 110 MVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGM 169
M I D+Y+Y L++ F + LA+ V +M G +P+I T ++L+ Y
Sbjct: 106 MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR 165
Query: 170 FAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNT 229
+E + ++ + P+ VT+NTL+ + SE + M G P+ T+ T
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 225
Query: 230 LISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGR 289
+++ + G D A ++ K+M + + D+ Y ++ AL + + +EM+N
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 290 CKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAE 349
+PN VTY+SL+ N + + L ++ KI + V L+ K L EAE
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 350 HAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLH 409
+ E KR I DI T +++++ + + + + + M ++ YN+L+
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 410 SRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDV 469
+ + + + RE+ ++G+ + ++YN +I + G A++I +M PD+
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 465
Query: 470 VTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHN 529
+TY+ + +A+ V + + K +PD TYN +++ CK E+ ++ +
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 530 LS 531
LS
Sbjct: 526 LS 527
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 147/280 (52%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M + + PD+ T+++LI+ +EA +FE + P++VTYN L+ + K++
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
R +E ME+ ++M RG + VTY +LI + G + A ++ +MV + PD+ TY+
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
LL G K E A+ VFE ++ + +P+I T+N +I+ G + +F +
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
P+++ + T+++ F + GL E +F+EMK G +P T+NTLI A R G +
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAAS 589
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLS 283
+ K M G D ST + V+ L G L + ++LS
Sbjct: 590 AELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEMLS 629
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 171/309 (55%), Gaps = 1/309 (0%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSL-YEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
MK GL P+L T+N +I C G + +++ + F+E++ G++PD +T+N+LL V +
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ A + +M +R + +Y +L+ A + G ++ A E+ QM K I P+V +Y+
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
T++ GF A + + A+ +F EMR G + ++N L+ +Y G E + +E+ +
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
D+VT+N LL +G+ G EV VF EMKR +P T++TLI YS+ G + +A
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
+++ AG+ D+ Y+A++ AL + GL + ++ EM PN VTY+S++ A
Sbjct: 534 MEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Query: 304 YANGKEFEK 312
+ ++
Sbjct: 594 FGRSATMDR 602
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 186/360 (51%), Gaps = 3/360 (0%)
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
+ ++S K +A R+FE G + F+ALI YG G+ E VF +K
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 183 CQCSPDIVTWNTLLAVFGQNGLD-SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFD 241
P++VT+N ++ G+ G++ +V+ F EM+R G P+R TFN+L++ SR G ++
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 242 QARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL 301
AR ++ M + D+ +YN +L A+ +GG + + ++L++M R PN V+YS+++
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 302 HAYANGKEF-EKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI 360
+A F E +N E Y G I V TL+ + +K EA E GI
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLG-IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475
Query: 361 PHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEM 420
D+ T NA+L YG++ + K+ M +L Y++L+ +S+ ++++
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 535
Query: 421 ILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYA 480
I RE G+ D++ Y+ +I A C+NG + A +++EM P+VVTYN+ + +
Sbjct: 536 IFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFG 595
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 180/373 (48%), Gaps = 56/373 (15%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M+ G+ PD TFN+L++ C G L+E A LF+E+ + D+ +YN LLD K
Sbjct: 329 EMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGG 388
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ A E+L QM + P++V+Y+++I + + G +EAL L +M I D +Y
Sbjct: 389 QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYN 448
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
TLLS + + E A+ + EM + G K ++ T+NAL+ YG +G + E+ KVF E+K
Sbjct: 449 TLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE 508
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
P+++T++TL+ + + GL E +F+E K AG + ++ LI A + G A
Sbjct: 509 HVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSA 568
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSE---------------KVLSEMENG 288
++ M + G++P++ TYN+++ A R ++S L+E E
Sbjct: 569 VSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGN 628
Query: 289 RC-----------------------------------------KPNEVTYSSLLHAYANG 307
R KPN VT+S++L+A +
Sbjct: 629 RVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRC 688
Query: 308 KEFEKMNALAEEI 320
FE + L EE+
Sbjct: 689 NSFEDASMLLEEL 701
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 220/464 (47%), Gaps = 35/464 (7%)
Query: 9 GLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRP-KE 67
G + F+ LIS L+EEA+ +F +K GLRP++VTYNA++D GK K+
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 68 AMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLS 127
+ +M+ G P +T+ SL++ R GL E A L ++M + I+ DV++Y TLL
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 128 GFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSP 187
+ +LA + +M PN+ +++ +I + G F E +F E++ +
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL 442
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVY 247
D V++NTLL+++ + G E + +EM G + T+N L+ Y + G +D+ + V+
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 248 KRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG 307
M V P+L TY+ ++ ++GGL++++ ++ E ++ + + V YS+L+ A
Sbjct: 503 TEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKN 562
Query: 308 KEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTL 367
+L +E+ I+ + V +++ F A + + +P + L
Sbjct: 563 GLVGSAVSLIDEMTKEGISPNVVTYNSII---DAFGRSATMDRSADYSNGGSLPFSSSAL 619
Query: 368 NAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSE-------- 419
+A+ G N++++ + + S R + E
Sbjct: 620 SALTETEG--------NRVIQLFGQ-------------LTTESNNRTTKDCEEGMQELSC 658
Query: 420 --MILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMK 461
+ R++ + I+P++++++ ++ A R +A +L E++
Sbjct: 659 ILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELR 702
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 174/360 (48%), Gaps = 1/360 (0%)
Query: 158 NALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKR 217
+A+I G G ++F+ A + ++ L++ +G++GL E VF MK
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 218 AGFVPERETFNTLISAYSRCG-SFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWE 276
G P T+N +I A + G F Q + M GV PD T+N++LA +RGGLWE
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 277 QSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLV 336
+ + EM N R + + +Y++LL A G + + + ++ +I + V T++
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 337 LVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFT 396
+K EA + F E + GI D + N +LS+Y + + IL+ M G
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 397 LSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRI 456
+ YN+L+ + + + + + + E+ + + P+L++Y+ +I Y + G EA I
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 457 LNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
E K DVV Y+ + N + G A+ ++ M K+G P+ TYNSI+D + +
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 153/306 (50%), Gaps = 21/306 (6%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L M + + P++ +++T+I ++EAL LF E++ G+ D V+YN LL +Y
Sbjct: 396 ILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYT 455
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K R +EA+++L++M S G +VTY +L+ Y + G +E ++ +M +H+ P++
Sbjct: 456 KVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLL 515
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY+TL+ G+ + AM +F E ++AG + ++ ++ALI G+ + E+
Sbjct: 516 TYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEM 575
Query: 181 KACQCSPDIVTWNTLLAVFGQNGL-----DSEVSGVFKEMKRAGFVPERETFNTLISAYS 235
SP++VT+N+++ FG++ D G A N +I +
Sbjct: 576 TKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFG 635
Query: 236 RCGSFDQARA----------------VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSE 279
+ + R V+++M + + P++ T++A+L A +R +E +
Sbjct: 636 QLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDAS 695
Query: 280 KVLSEM 285
+L E+
Sbjct: 696 MLLEEL 701
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 141/309 (45%), Gaps = 1/309 (0%)
Query: 228 NTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMEN 287
+ +IS R G A+ +++ G + ++A+++A R GL E++ V + M+
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 288 GRCKPNEVTYSSLLHAYANGK-EFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLA 346
+PN VTY++++ A G EF+++ +E+ + + +L+ V S+
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 347 EAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLM 406
A + F E R I D+ + N +L + + +IL M ++ Y++++
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 407 YLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPV 466
++ F ++ + E+ GI D +SYN ++ Y + G+ EA IL EM
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 467 PDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNF 526
DVVTYN + Y + E V M ++ P+ TY++++D Y K L +EA
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 527 VHNLSSLDL 535
S L
Sbjct: 537 FREFKSAGL 545
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/465 (25%), Positives = 215/465 (46%), Gaps = 43/465 (9%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV 71
P + F L+S + Y+ + LFE++++ G+ P + T N ++ S +P A
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140
Query: 72 LKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVN 131
L +M GF P +VT+TSL++ Y +E+A+ L +Q++ KP+V TYTTL+
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 132 AKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVT 191
+ A+ +F +M T G +PN+ T+NAL+ + G + + + +++ + P+++T
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 192 WNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRML 251
F LI A+ + G +A+ +Y M+
Sbjct: 261 -----------------------------------FTALIDAFVKVGKLMEAKELYNVMI 285
Query: 252 EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE 311
+ V PD+ TY +++ L GL +++ ++ ME C PNEV Y++L+H + K E
Sbjct: 286 QMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVE 345
Query: 312 K-MNALAEEIYSGKIT---THAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTL 367
M E G + T+ VL++ LV A+ F + R P DI T
Sbjct: 346 DGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP----DVAQEVFNQMSSRRAPPDIRTY 401
Query: 368 NAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILE 427
N +L V K I ++M + +++ Y ++ + + + +
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS 461
Query: 428 KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTY 472
KG++P++I+Y +I +CR G + EA + +MK+ +P+ Y
Sbjct: 462 KGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 116/482 (24%), Positives = 217/482 (45%), Gaps = 43/482 (8%)
Query: 30 YEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTS 89
+ +AL+LF + + P ++ + LL V K R + + +QM+ G PP + T
Sbjct: 64 FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 90 LISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAG 149
++ A +M++ +PD+ T+T+LL+G+ + + E A+ +F+++ G
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 150 CKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVS 209
KPN+ T+ LI+ ++F ++ P++VT+N L+ + G + +
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 210 GVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAAL 269
+ ++M + P TF LI A+ + G +A+ +Y M++ V PD+ TY +++ L
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 270 ARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEK-MNALAEEIYSGKIT-- 326
GL +++ ++ ME C PNEV Y++L+H + K E M E G +
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363
Query: 327 -THAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNK 385
T+ VL++ LV A+ F + R P DI T N +L V K
Sbjct: 364 ITYTVLIQGYCLVGRP----DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALM 419
Query: 386 ILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYC 445
I ++M RK EM + ++++Y I+I C
Sbjct: 420 IFEYM-------------------------RKREM----------DINIVTYTIIIQGMC 444
Query: 446 RNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQN 505
+ GK+ +A + + P+V+TY T ++ + + EA + + M + G P+++
Sbjct: 445 KLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNES 504
Query: 506 TY 507
Y
Sbjct: 505 VY 506
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 185/399 (46%), Gaps = 14/399 (3%)
Query: 4 DMKSQGLAPDLCTFNTLISC-------CRAGSLYEEALELFEEIKLAGLRPDMVTYNALL 56
M+ G+ P LCT N ++ C CRA + ++L G PD+VT+ +LL
Sbjct: 108 QMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKL-------GFEPDLVTFTSLL 160
Query: 57 DVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIK 116
+ Y R ++A+ + Q+ GF P++VTYT+LI ++ L A+EL NQM +
Sbjct: 161 NGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSR 220
Query: 117 PDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKV 176
P+V TY L++G + A + +M +PN+ TF ALI + G E ++
Sbjct: 221 PNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKEL 280
Query: 177 FKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 236
+ + PD+ T+ +L+ GL E +F M+R G P + TLI + +
Sbjct: 281 YNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCK 340
Query: 237 CGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVT 296
+ ++ M + GV + TY ++ G + +++V ++M + R P+ T
Sbjct: 341 SKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRT 400
Query: 297 YSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFK 356
Y+ LL + EK + E + ++ + V ++ K + +A F
Sbjct: 401 YNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLF 460
Query: 357 KRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGF 395
+G+ ++ T M+S + R+ L+ + + + K M E GF
Sbjct: 461 SKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGF 499
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 153/324 (47%), Gaps = 35/324 (10%)
Query: 9 GLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEA 68
G P++ T+ TLI C A+ELF ++ G RP++VTYNAL+ + R +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 69 MEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY------ 122
+L+ M R P+++T+T+LI A+V+ G L EA EL N M++ + PDV+TY
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 123 -----------------------------TTLLSGFVNAKKDELAMRVFEEMRTAGCKPN 153
TTL+ GF +K+ E M++F EM G N
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 154 ICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFK 213
T+ LI+ Y G +VF ++ + + PDI T+N LL NG + +F+
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422
Query: 214 EMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGG 273
M++ T+ +I + G + A ++ + G+ P++ TY +++ R G
Sbjct: 423 YMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 482
Query: 274 LWEQSEKVLSEMENGRCKPNEVTY 297
L +++ + +M+ PNE Y
Sbjct: 483 LIHEADSLFKKMKEDGFLPNESVY 506
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 190/437 (43%), Gaps = 12/437 (2%)
Query: 95 VRDGL----LEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
+R+GL +AL+L +MV P + +T LLS + ++ + +FE+M+ G
Sbjct: 55 LRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGI 114
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
P +CT N ++ ++ PD+VT+ +LL + +
Sbjct: 115 PPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIA 174
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
+F ++ GF P T+ TLI + + A ++ +M G P++ TYNA++ L
Sbjct: 175 LFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLC 234
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYAN-GKEFEK---MNALAEEIYSGKIT 326
G W + +L +M R +PN +T+++L+ A+ GK E N + + +
Sbjct: 235 EIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVF 294
Query: 327 THAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKI 386
T+ L+ L + + L EA F ++ G + ++ + + K V KI
Sbjct: 295 TYGSLINGLCM----YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKI 350
Query: 387 LKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCR 446
M + G + Y L+ + ++ + ++ + PD+ +YN+++ C
Sbjct: 351 FYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCC 410
Query: 447 NGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNT 506
NGK+ +A I M+ ++VTY + +A + + +G KP+ T
Sbjct: 411 NGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVIT 470
Query: 507 YNSIVDWYCKLHLREEA 523
Y +++ +C+ L EA
Sbjct: 471 YTTMISGFCRRGLIHEA 487
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 114/223 (51%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M + PD+ T+ +LI+ L +EA ++F ++ G P+ V Y L+ + KS+R
Sbjct: 284 MIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKR 343
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
++ M++ +M +G + +TYT LI Y G + A E+ NQM + PD+ TY
Sbjct: 344 VEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNV 403
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
LL G K E A+ +FE MR NI T+ +I+ G + +F + +
Sbjct: 404 LLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKG 463
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETF 227
P+++T+ T+++ F + GL E +FK+MK GF+P +
Sbjct: 464 MKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 131/263 (49%), Gaps = 2/263 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L DM + + P++ TF LI + G L E A EL+ + + PD+ TY +L++
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKLME-AKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
EA ++ ME G P+ V YT+LI + + +E+ +++ +M +K + +
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TYT L+ G+ + ++A VF +M + P+I T+N L+ G + +F+
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEY 423
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
++ + +IVT+ ++ + G + +F + G P T+ T+IS + R G
Sbjct: 424 MRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGL 483
Query: 240 FDQARAVYKRMLEAGVTPDLSTY 262
+A +++K+M E G P+ S Y
Sbjct: 484 IHEADSLFKKMKEDGFLPNESVY 506
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 86/183 (46%), Gaps = 3/183 (1%)
Query: 352 FLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSR 411
F + + GIP + T N ++ + + L M + GF L + SL+ +
Sbjct: 106 FEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCH 165
Query: 412 TRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVT 471
+ + +IL G +P++++Y +I C+N + A + N+M P+VVT
Sbjct: 166 WNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVT 225
Query: 472 YNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYC---KLHLREEAYNFVH 528
YN V +G+A +++ M+K+ +P+ T+ +++D + KL +E YN +
Sbjct: 226 YNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI 285
Query: 529 NLS 531
+S
Sbjct: 286 QMS 288
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 212/433 (48%)
Query: 9 GLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEA 68
G PD TFNTLI EA+ L + + G +PD+VTYN++++ +S A
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 69 MEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSG 128
+++L++ME R + TY+++I + RDG ++ A+ L +M K IK V TY +L+ G
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 129 FVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPD 188
A K + ++M + PN+ TFN L+ ++ G E +++KE+ SP+
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 189 IVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYK 248
I+T+NTL+ + SE + + M R P+ TF +LI Y D V++
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 392
Query: 249 RMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGK 308
+ + G+ + TY+ ++ + G + +E++ EM + P+ +TY LL +
Sbjct: 393 NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452
Query: 309 EFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLN 368
+ EK + E++ K+ V+ T++ K + +A + F +G+ ++ T
Sbjct: 453 KLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYT 512
Query: 369 AMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEK 428
M+S +K +++ N +L+ M E G + YN+L+ H R + S ++ E+
Sbjct: 513 VMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSC 572
Query: 429 GIEPDLISYNIVI 441
G D S +VI
Sbjct: 573 GFSADASSIKMVI 585
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 111/501 (22%), Positives = 233/501 (46%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV 71
P L F+ S + L+ ++++L G+ ++ T N +++ + + + A V
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 72 LKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVN 131
L ++ G+ P T+ +LI +G + EA+ L ++MVE +PDV TY ++++G
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 132 AKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVT 191
+ LA+ + +M K ++ T++ +I G +FKE++ +VT
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 192 WNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRML 251
+N+L+ + G ++ + + K+M VP TFN L+ + + G +A +YK M+
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 252 EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE 311
G++P++ TYN ++ ++ +L M +C P+ VT++SL+ Y K +
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 312 KMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAML 371
+ I + +AV LV + + AE F E G+ D+ T +L
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 372 SLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIE 431
+ K +I + + +S L + Y +++ + + + + KG++
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505
Query: 432 PDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGV 491
P++++Y ++I C+ G ++EA +L +M++ P+ TYNT + + + + +
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 565
Query: 492 VQCMIKQGCKPDQNTYNSIVD 512
++ M G D ++ ++D
Sbjct: 566 IEEMKSCGFSADASSIKMVID 586
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 120/520 (23%), Positives = 235/520 (45%), Gaps = 29/520 (5%)
Query: 5 MKSQGLAPDL-CTFNTLISCC-RAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
+K+ L DL CT ++ S C R S F E +G+ +D+
Sbjct: 22 LKTGSLRTDLLCTISSFFSSCERDFSSISNGNVCFRERLRSGI----------VDI---- 67
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
+ +A+ + ++M PS+V ++ SA R L+ Q+ I ++YT
Sbjct: 68 -KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTL 126
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
+++ F K A V ++ G +P+ TFN LIK G+F E GKV + +
Sbjct: 127 NIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIK-----GLFLE-GKVSEAVVL 180
Query: 183 CQ------CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 236
C PD+VT+N+++ ++G S + ++M+ + T++T+I + R
Sbjct: 181 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 240
Query: 237 CGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVT 296
G D A +++K M G+ + TYN+++ L + G W +L +M + PN +T
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300
Query: 297 YSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFK 356
++ LL + + ++ N L +E+ + I+ + + TL+ + L+EA +
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 357 KRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFR 416
+ DI T +++ Y K V K+ + + + G + Y+ L+ ++ +
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIK 420
Query: 417 KSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFV 476
+E + +E++ G+ PD+++Y I++ C NGK+ +A I +++ +V Y T +
Sbjct: 421 LAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTII 480
Query: 477 ATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
+A + + +G KP+ TY ++ CK
Sbjct: 481 EGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 520
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 177/334 (52%), Gaps = 2/334 (0%)
Query: 4 DMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
+M+++G+ + T+N+L+ C+AG + AL L +++ + P+++T+N LLDV+ K
Sbjct: 253 EMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL-LLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
+ +EA E+ K+M +RG P+I+TY +L+ Y L EA + + MV PD+ T+
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
T+L+ G+ K+ + M+VF + G N T++ L++ + G ++F+E+ +
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
PD++T+ LL NG + +F++++++ + T+I + G +
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
A ++ + GV P++ TY +++ L + G ++ +L +ME PN+ TY++L+
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551
Query: 303 AYANGKEFEKMNALAEEIYSGKITTHAVLLKTLV 336
A+ + L EE+ S + A +K ++
Sbjct: 552 AHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/434 (23%), Positives = 198/434 (45%), Gaps = 8/434 (1%)
Query: 101 EEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNAL 160
++A+ L +M+ P + ++ S K+ L + +++ G NI T N +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 161 IKMYGD--RGMFA--EMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMK 216
I + + FA +GKV K PD T+NTL+ G SE + M
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMK----LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 217 RAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWE 276
G P+ T+N++++ R G A + ++M E V D+ TY+ ++ +L R G +
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 277 QSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLV 336
+ + EME K + VTY+SL+ ++ L +++ S +I + + L+
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 337 LVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFT 396
V K L EA + E RGI +I T N ++ Y + +++ N +L M + +
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365
Query: 397 LSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRI 456
+ + SL+ + + + R I ++G+ + ++Y+I++ +C++GK+ A+ +
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 457 LNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
EM +PDV+TY + N +A+ + + + K Y +I++ CK
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 517 LHLREEAYNFVHNL 530
E+A+N +L
Sbjct: 486 GGKVEDAWNLFCSL 499
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 149/287 (51%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L DM S+ + P++ TFN L+ +EA EL++E+ G+ P+++TYN L+D Y
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
R EA +L M P IVT+TSLI Y +++ +++ + ++ + +
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY+ L+ GF + K +LA +F+EM + G P++ T+ L+ D G + ++F+++
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ + IV + T++ + G + +F + G P T+ +IS + GS
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMEN 287
+A + ++M E G P+ TYN ++ A R G S K++ EM++
Sbjct: 525 SEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 134/266 (50%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M ++G++P++ T+NTL+ + EA + + + PD+VT+ +L+ Y +
Sbjct: 323 EMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVK 382
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
R + M+V + + RG + VTY+ L+ + + G ++ A EL +MV + PDV TY
Sbjct: 383 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 442
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
LL G + K E A+ +FE+++ + I + +I+ G + +F +
Sbjct: 443 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 502
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
P+++T+ +++ + G SE + + ++M+ G P T+NTLI A+ R G +
Sbjct: 503 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTAS 562
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAAL 269
+ + M G + D S+ V+ L
Sbjct: 563 AKLIEEMKSCGFSADASSIKMVIDML 588
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 158/356 (44%), Gaps = 35/356 (9%)
Query: 176 VFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYS 235
+F+E+ + P +V ++ + + + V K+++ G T N +I+ +
Sbjct: 75 LFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 134
Query: 236 RCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEV 295
RC A +V ++++ G PD +T+N ++ L G ++ ++ M C+P+ V
Sbjct: 135 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV 194
Query: 296 TYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEF 355
TY+S+++ SG + LL+ +
Sbjct: 195 TYNSIVNGICR---------------SGDTSLALDLLR--------------------KM 219
Query: 356 KKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNF 415
++R + D+ T + ++ R + + K M G S+ YNSL+ + +
Sbjct: 220 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 279
Query: 416 RKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTF 475
++L++++ + I P++I++N+++ + + GK+ EA + EM P+++TYNT
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 339
Query: 476 VATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLS 531
+ Y + EA ++ M++ C PD T+ S++ YC + ++ N+S
Sbjct: 340 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 64/131 (48%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
D++ + + + T+I G E+A LF + G++P+++TY ++ K
Sbjct: 463 DLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 522
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
EA +L++ME G P+ TY +LI A++RDG L + +L +M D +
Sbjct: 523 SLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIK 582
Query: 124 TLLSGFVNAKK 134
++ ++A K
Sbjct: 583 MVIDMLLSAMK 593
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 246/511 (48%), Gaps = 2/511 (0%)
Query: 6 KSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRP 65
++ G+AP+L T+N LI +E+A + + G +PD+ +Y+ +++ K+ +
Sbjct: 141 ETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKL 200
Query: 66 KEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVE-KHIKPDVYTYTT 124
+A+E+ +M RG P + Y LI ++++ + A+EL ++++E + P+V T+
Sbjct: 201 DDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNI 260
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
++SG + + ++++E M+ + ++ T+++LI D G + VF E+ +
Sbjct: 261 MISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERK 320
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
S D+VT+NT+L F + G E +++ M+ V ++N LI G D+A
Sbjct: 321 ASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEAT 379
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
+++ M G D +TY + L G ++ V+ E+E+ + Y+S++
Sbjct: 380 MIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCL 439
Query: 305 ANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDI 364
K E+ + L +E+ + ++ + L+ + L EA E K G +
Sbjct: 440 CKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTV 499
Query: 365 TTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILRE 424
+ N ++ + + + +K M E+G+ L Y+ L+ R R + + +
Sbjct: 500 VSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQ 559
Query: 425 ILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSM 484
L+ G+E D++ +NI+I+ C GK+ +A ++ M+ ++VTYNT + +
Sbjct: 560 FLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGD 619
Query: 485 FGEAIGVVQCMIKQGCKPDQNTYNSIVDWYC 515
A + M K G +PD +YN+I+ C
Sbjct: 620 SNRATVIWGYMYKMGLQPDIISYNTIMKGLC 650
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/493 (25%), Positives = 233/493 (47%), Gaps = 42/493 (8%)
Query: 28 SLYEEALELFEEIK-LAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVT 86
S+ ++AL++F+ ++ + G P + +YN LL+ + ++++ + + E+ G P++ T
Sbjct: 92 SMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQT 151
Query: 87 YTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMR 146
Y LI + E+A + M ++ KPDV++Y+T+++ A K + A+ +F+EM
Sbjct: 152 YNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMS 211
Query: 147 TAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDS 206
G P++ +N LI G E K+ K + W+ LL
Sbjct: 212 ERGVAPDVTCYNILID-----GFLKE-----KDHKTA-----MELWDRLL---------- 246
Query: 207 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVL 266
E S V+ P +T N +IS S+CG D +++RM + DL TY++++
Sbjct: 247 EDSSVY---------PNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLI 297
Query: 267 AALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG---KEFEKMNALAEEIYSG 323
L G +++E V +E++ + + VTY+++L + KE ++ + E S
Sbjct: 298 HGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV 357
Query: 324 KITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKT 383
I ++ +L+K L L N K D EA + +G D TT + V K
Sbjct: 358 NIVSYNILIKGL-LENGKID---EATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKA 413
Query: 384 NKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYA 443
+++ + SG L + Y S++ + + ++ +++E+ + G+E + N +I
Sbjct: 414 LGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGG 473
Query: 444 YCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPD 503
R+ ++ EA L EM P VV+YN + FGEA V+ M++ G KPD
Sbjct: 474 LIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPD 533
Query: 504 QNTYNSIVDWYCK 516
TY+ ++ C+
Sbjct: 534 LKTYSILLCGLCR 546
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 120/518 (23%), Positives = 237/518 (45%), Gaps = 57/518 (11%)
Query: 5 MKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M +G PD+ +++T+I+ +AG L ++ALELF+E+ G+ PD+ YN L+D + K +
Sbjct: 175 MWKEGFKPDVFSYSTVINDLAKAGKL-DDALELFDEMSERGVAPDVTCYNILIDGFLKEK 233
Query: 64 RPKEAMEVLKQM-ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
K AME+ ++ E P++ T+ +IS + G +++ L++ +M + + D+YTY
Sbjct: 234 DHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTY 293
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
++L+ G +A + A VF E+ ++ T+N ++ G F GK+ + ++
Sbjct: 294 SSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTML------GGFCRCGKIKESLEL 347
Query: 183 CQC-----SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 237
+ S +IV++N L+ +NG E + +++ M G+ ++ T+ I
Sbjct: 348 WRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVN 407
Query: 238 GSFDQARAVYKRMLEAGVTPDLSTY----------------------------------- 262
G ++A V + + +G D+ Y
Sbjct: 408 GYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVC 467
Query: 263 NAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEI-- 320
NA++ L R ++ L EM C+P V+Y+ L+ +F + +A +E+
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 321 --YSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKK 378
+ + T+++LL L + K D E H FL+ G+ D+ N ++
Sbjct: 528 NGWKPDLKTYSILLCGLCR-DRKIDLALELWHQFLQ---SGLETDVMMHNILIHGLCSVG 583
Query: 379 LVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYN 438
+ ++ M T +L YN+LM + + ++ +I + + G++PD+ISYN
Sbjct: 584 KLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYN 643
Query: 439 IVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFV 476
++ C ++ A ++ ++ P V T+N V
Sbjct: 644 TIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 184/417 (44%), Gaps = 15/417 (3%)
Query: 140 RVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC-QCSPDIVTWNTLLAV 198
R+ E +R+ CK + ++IK YG M + VFK ++ C P I ++NTLL
Sbjct: 64 RIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNA 123
Query: 199 FGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPD 258
F + +V +F + AG P +T+N LI + F++AR M + G PD
Sbjct: 124 FVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPD 183
Query: 259 LSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAE 318
+ +Y+ V+ LA+ G + + ++ EM P+ Y+ L+ + K+ + L +
Sbjct: 184 VFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWD 243
Query: 319 EIYSG-----KITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSL 373
+ + TH +++ L SK + + + K+ D+ T ++++
Sbjct: 244 RLLEDSSVYPNVKTHNIMISGL----SKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHG 299
Query: 374 YGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPD 433
V K + + E ++ + YN+++ R ++S + R I+E +
Sbjct: 300 LCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWR-IMEHKNSVN 358
Query: 434 LISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQ 493
++SYNI+I NGK+ EA I M D TY F+ N +A+GV+Q
Sbjct: 359 IVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQ 418
Query: 494 CMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSS----LDLHVSEEEKGRLL 546
+ G D Y SI+D CK EEA N V +S L+ HV G L+
Sbjct: 419 EVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLI 475
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 128/270 (47%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
++ +++S G D+ + ++I C EEA L +E+ G+ + NAL+
Sbjct: 416 VMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLI 475
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ R EA L++M G P++V+Y LI + G EA +M+E KPD+
Sbjct: 476 RDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLK 535
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY+ LL G +K +LA+ ++ + +G + ++ N LI G + V +
Sbjct: 536 TYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANM 595
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ C+ ++VT+NTL+ F + G + + ++ M + G P+ ++NT++ C
Sbjct: 596 EHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGV 655
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
A + G+ P + T+N ++ A+
Sbjct: 656 SYAMEFFDDARNHGIFPTVYTWNILVRAVV 685
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 134/303 (44%), Gaps = 2/303 (0%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M ++G A D T+ I +AL + +E++ +G D+ Y +++D K +R
Sbjct: 385 MPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKR 444
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+EA ++K+M G + +LI +RD L EA +M + +P V +Y
Sbjct: 445 LEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNI 504
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALI-KMYGDRGMFAEMGKVFKEIKAC 183
L+ G A K A +EM G KP++ T++ L+ + DR + + +++ +
Sbjct: 505 LICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLAL-ELWHQFLQS 563
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
D++ N L+ G + V M+ T+NTL+ + + G ++A
Sbjct: 564 GLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRA 623
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
++ M + G+ PD+ +YN ++ L + + + N P T++ L+ A
Sbjct: 624 TVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRA 683
Query: 304 YAN 306
N
Sbjct: 684 VVN 686
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 84/165 (50%), Gaps = 2/165 (1%)
Query: 4 DMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
+M G PDL T++ L+ CR + + ALEL+ + +GL D++ +N L+
Sbjct: 524 EMLENGWKPDLKTYSILLCGLCRDRKI-DLALELWHQFLQSGLETDVMMHNILIHGLCSV 582
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
+ +AM V+ ME R ++VTY +L+ + + G A + M + ++PD+ +Y
Sbjct: 583 GKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISY 642
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDR 167
T++ G + AM F++ R G P + T+N L++ +R
Sbjct: 643 NTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVNR 687
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 117/472 (24%), Positives = 241/472 (51%), Gaps = 13/472 (2%)
Query: 2 LMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGK 61
L M+ ++ DL ++ LI R Y +A+ +F +K +G+ PD+V YN++++VYGK
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYT 121
++ +EA ++K+M G P+ V+Y++L+S YV + EAL + +M E + D+ T
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTT 332
Query: 122 YTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK 181
++ + + A R+F +R +PN+ ++N ++++YG+ +F E +F+ ++
Sbjct: 333 CNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQ 392
Query: 182 ACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFD 241
++VT+NT++ ++G+ + + + +EM+ G P T++T+IS + + G D
Sbjct: 393 RKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLD 452
Query: 242 QARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL 301
+A +++++ +GV D Y ++ A R GL ++++L E++ P E + L
Sbjct: 453 RAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILA 512
Query: 302 HAYANGKEFEKMNALAEEIYSGKITTHAVL--LKTLVLVNSKFDFLAEAEHAFLEFKKRG 359
A G+ E + SG++ +V + L N ++ + E F + + G
Sbjct: 513 KA---GRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIE---VFEKMRTAG 566
Query: 360 IPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSE 419
D + +L+ YG+++ K + + + M E G + ++ L+S ++F E
Sbjct: 567 YFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVE 626
Query: 420 MILREILEKGIEPDLISYNIVIYA-YCRNGKMTEAKRILNEMKDPA---PVP 467
+ + LE + ++V+ A Y R K+ +A R++N M++ P P
Sbjct: 627 SLFQR-LESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGILKPFP 677
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 232/455 (50%), Gaps = 12/455 (2%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M+ + LAPD T++TLI+ +++ AL ++++ + D+V Y+ L+++ +
Sbjct: 180 EMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLC 239
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+A+ + +++ G P +V Y S+I+ Y + L EA L +M E + P+ +Y+
Sbjct: 240 DYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYS 299
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
TLLS +V K A+ VF EM+ C ++ T N +I +YG M E ++F ++
Sbjct: 300 TLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKM 359
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
P++V++NT+L V+G+ L E +F+ M+R T+NT+I Y + ++A
Sbjct: 360 DIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKA 419
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
+ + M G+ P+ TY+ +++ + G +++ + ++ + + ++V Y +++ A
Sbjct: 420 TNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVA 479
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
Y L E+ K+ + + +T + + +K EA F + + G D
Sbjct: 480 YERVGLMGHAKRLLHEL---KLPDN-IPRETAITILAKAGRTEEATWVFRQAFESGEVKD 535
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYL---HSRTRNFRKSEM 420
I+ M++LY R + ++ + M +G+ P N + + + + R F K++
Sbjct: 536 ISVFGCMINLYSRNQRYVNVIEVFEKMRTAGY---FPDSNVIAMVLNAYGKQREFEKADT 592
Query: 421 ILREILEKG-IEPDLISYNIV-IYAYCRNGKMTEA 453
+ RE+ E+G + PD + + ++ +Y+ ++ +M E+
Sbjct: 593 VYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVES 627
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 104/475 (21%), Positives = 226/475 (47%), Gaps = 6/475 (1%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV 71
P + +N ++ ++ A LF+E++ L PD TY+ L+ +GK A+
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 72 LKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVN 131
L++ME +V Y++LI R +A+ + +++ I PD+ Y ++++ +
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 132 AKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVT 191
AK A + +EM AG PN +++ L+ +Y + F E VF E+K C+ D+ T
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTT 332
Query: 192 WNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRML 251
N ++ V+GQ + E +F +++ P ++NT++ Y F +A +++ M
Sbjct: 333 CNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQ 392
Query: 252 EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE 311
+ ++ TYN ++ + E++ ++ EM++ +PN +TYS+++ + + +
Sbjct: 393 RKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLD 452
Query: 312 KMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAML 371
+ L +++ S + VL +T+++ + + A+ E K +P +I A +
Sbjct: 453 RAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELK---LPDNIPRETA-I 508
Query: 372 SLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIE 431
++ + + + + +ESG + + ++ L+SR + + + ++ G
Sbjct: 509 TILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYF 568
Query: 432 PDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPV-PDVVTYNTFVATYAANSMF 485
PD +V+ AY + + +A + EM++ V PD V + ++ Y++ F
Sbjct: 569 PDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQ-MLSLYSSKKDF 622
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/487 (22%), Positives = 220/487 (45%), Gaps = 6/487 (1%)
Query: 20 LISCCRAGSLYEEALELFEEI-KLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESR 78
++S + ++ +L L + + + A P + YN +L ++++ A + +M R
Sbjct: 125 MVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQR 184
Query: 79 GFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELA 138
P TY++LI+++ ++G+ + AL +M + + D+ Y+ L+ A
Sbjct: 185 ALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKA 244
Query: 139 MRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAV 198
+ +F ++ +G P++ +N++I +YG +F E + KE+ P+ V+++TLL+V
Sbjct: 245 ISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSV 304
Query: 199 FGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPD 258
+ +N E VF EMK + T N +I Y + +A ++ + + + P+
Sbjct: 305 YVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPN 364
Query: 259 LSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAE 318
+ +YN +L L+ ++ + M+ + N VTY++++ Y E EK L +
Sbjct: 365 VVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQ 424
Query: 319 EIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKK 378
E+ S I +A+ T++ + K L A F + + G+ D M+ Y R
Sbjct: 425 EMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVG 484
Query: 379 LVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYN 438
L+ ++L +E ++P ++ L R ++ + R+ E G D+ +
Sbjct: 485 LMGHAKRLL---HELKLPDNIPRETAITILAKAGRT-EEATWVFRQAFESGEVKDISVFG 540
Query: 439 IVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQ 498
+I Y RN + + +M+ PD + Y F +A V + M ++
Sbjct: 541 CMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEE 600
Query: 499 GCK-PDQ 504
GC PD+
Sbjct: 601 GCVFPDE 607
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/479 (21%), Positives = 207/479 (43%), Gaps = 66/479 (13%)
Query: 76 ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKD 135
E + PS+ Y ++ +R + A L ++M ++ + PD YTY+TL++ F
Sbjct: 147 EEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMF 206
Query: 136 ELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTL 195
+ A+ ++M ++ ++ LI++ +++ +F +K +PD+V +N++
Sbjct: 207 DSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSM 266
Query: 196 LAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGV 255
+ V+G+ L E + KEM AG +P +++TL+S Y F +A +V+ M E
Sbjct: 267 INVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNC 326
Query: 256 TPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNA 315
DL+T N ++ + + ++++++ + +PN V+Y+++L Y + F
Sbjct: 327 ALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELF----- 381
Query: 316 LAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYG 375
EA H F +++ I ++ T N M+ +YG
Sbjct: 382 ------------------------------GEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 411
Query: 376 RKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLI 435
+ K +++ M G + Y++++ + + ++ + +++ G+E D +
Sbjct: 412 KTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQV 471
Query: 436 SYNIVIYAYCRNGKMTEAKRILNEMKDPAPVP---------------------------- 467
Y +I AY R G M AKR+L+E+K P +P
Sbjct: 472 LYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESG 531
Query: 468 ---DVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEA 523
D+ + + Y+ N + I V + M G PD N +++ Y K E+A
Sbjct: 532 EVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKA 590
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 195/403 (48%), Gaps = 8/403 (1%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
++ +M G+ P+ +++TL+S + EAL +F E+K D+ T N ++DVYG
Sbjct: 282 LIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYG 341
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ KEA + + P++V+Y +++ Y L EA+ L M K I+ +V
Sbjct: 342 QLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVV 401
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY T++ + + E A + +EM++ G +PN T++ +I ++G G +F+++
Sbjct: 402 TYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKL 461
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
++ D V + T++ + + GL + E+K +P RET T++ ++ G
Sbjct: 462 RSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIP-RETAITIL---AKAGRT 517
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
++A V+++ E+G D+S + ++ +R + +V +M P+ + +
Sbjct: 518 EEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMV 577
Query: 301 LHAYANGKEFEKMNALAEEIY-SGKITTHAVLLKTLVLVNSKFDF-LAEAEHAFLEFKKR 358
L+AY +EFEK + + E+ G + V + L L +SK DF + E+ LE
Sbjct: 578 LNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPN 637
Query: 359 GIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPG 401
++ + A +LY R + ++++ M E G PG
Sbjct: 638 VNSKELHLVVA--ALYERADKLNDASRVMNRMRERGILKPFPG 678
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 173/355 (48%), Gaps = 6/355 (1%)
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
+ +P + +N +L + G+F EM++ P+R T++TLI+++ + G FD
Sbjct: 149 AKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDS 208
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
A + ++M + V+ DL Y+ ++ R + ++ + S ++ P+ V Y+S+++
Sbjct: 209 ALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMIN 268
Query: 303 AYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLV---NSKFDFLAEAEHAFLEFKKRG 359
Y K F + L +E+ + + V TL+ V N KF EA F E K+
Sbjct: 269 VYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKF---LEALSVFAEMKEVN 325
Query: 360 IPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSE 419
D+TT N M+ +YG+ +V + +++ + + ++ YN+++ ++ F ++
Sbjct: 326 CALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAI 385
Query: 420 MILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATY 479
+ R + K IE ++++YN +I Y + + +A ++ EM+ P+ +TY+T ++ +
Sbjct: 386 HLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIW 445
Query: 480 AANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLD 534
A + Q + G + DQ Y +++ Y ++ L A +H L D
Sbjct: 446 GKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPD 500
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 141/281 (50%)
Query: 252 EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE 311
EA TP + YN VL + R ++ + + EM P+ TYS+L+ ++ F+
Sbjct: 148 EAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFD 207
Query: 312 KMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAML 371
+ +++ +++ VL L+ ++ + ++A F K+ GI D+ N+M+
Sbjct: 208 SALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMI 267
Query: 372 SLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIE 431
++YG+ KL + ++K M E+G + Y++L+ ++ F ++ + E+ E
Sbjct: 268 NVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCA 327
Query: 432 PDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGV 491
DL + NI+I Y + + EA R+ ++ P+VV+YNT + Y +FGEAI +
Sbjct: 328 LDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHL 387
Query: 492 VQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSS 532
+ M ++ + + TYN+++ Y K E+A N V + S
Sbjct: 388 FRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQS 428
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 137/514 (26%), Positives = 238/514 (46%), Gaps = 36/514 (7%)
Query: 30 YEEALELFEEIKLAGLRP-DMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYT 88
+E A+E+FE K G +++ YN +L + GK+ + + + +M +G P TY
Sbjct: 167 WERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYG 226
Query: 89 SLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTA 148
+LI Y + GL AL +M + ++PD T +L + A++ + A F++
Sbjct: 227 TLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCD 286
Query: 149 GCKPN--IC----TFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQN 202
K + +C T+N +I YG G E + FK + P VT+NT++ ++G N
Sbjct: 287 ENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNN 346
Query: 203 GLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTY 262
G EV+ + K MK P+ T+N LIS +++ ++A A +K M + G+ PD +Y
Sbjct: 347 GQLGEVTSLMKTMK-LHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSY 405
Query: 263 NAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG----------KEFEK 312
+L A + + E++E +++EM++ + +E T S+L Y K F
Sbjct: 406 RTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHV 465
Query: 313 MNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFL---EFKKRGIPHDITTLNA 369
++ E YS I + + +L+EAE F+ E KR + N
Sbjct: 466 AGNMSSEGYSANIDAYG-----------ERGYLSEAERVFICCQEVNKR----TVIEYNV 510
Query: 370 MLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKG 429
M+ YG K K ++ + M G T YN+L+ + + K L ++ E G
Sbjct: 511 MIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETG 570
Query: 430 IEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAI 489
D I Y VI ++ + G++ A+ + EM + PDVV Y + +A +A+
Sbjct: 571 YVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAM 630
Query: 490 GVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEA 523
V+ M + G + YNS++ Y K+ +EA
Sbjct: 631 SYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEA 664
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 137/559 (24%), Positives = 260/559 (46%), Gaps = 63/559 (11%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M +G+ P TFNT+I E L + +KL PD TYN L+ ++ K+
Sbjct: 324 MLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CAPDTRTYNILISLHTKNND 382
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+ A K+M+ G P V+Y +L+ A+ ++EEA L +M + +++ D YT +
Sbjct: 383 IERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSA 442
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICT--FNALIKMYGDRGMFAEMGKVFKEIKA 182
L +V A+ E + F+ AG N+ + ++A I YG+RG +E +VF
Sbjct: 443 LTRMYVEAEMLEKSWSWFKRFHVAG---NMSSEGYSANIDAYGERGYLSEAERVFI---C 496
Query: 183 CQ--CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
CQ ++ +N ++ +G + + +F+ M G P++ T+NTL+ +
Sbjct: 497 CQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMP 556
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
+ R ++M E G D Y AV+++ + G +E+V EM +P+ V Y L
Sbjct: 557 HKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVL 616
Query: 301 LHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEF----K 356
++A+A+ ++ + E + I ++V+ +L+ + +K +L EAE + +
Sbjct: 617 INAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCN 676
Query: 357 KRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFR 416
K P D+ T N M++LY + +V R
Sbjct: 677 KTQYP-DVYTSNCMINLYSERSMV-----------------------------------R 700
Query: 417 KSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFV 476
K+E I + ++G E + ++ +++ Y +NG+ EA +I +M++ + D ++YN+ +
Sbjct: 701 KAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVL 759
Query: 477 ATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLH 536
+A + F EA+ + M+ G +PD +T+ S+ KL + ++A +
Sbjct: 760 GLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKI--------- 810
Query: 537 VSEEEKGRLLERIAEKWIN 555
EE + + ++R E WI+
Sbjct: 811 --EEIRKKEIKRGLELWIS 827
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 187/443 (42%), Gaps = 41/443 (9%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+MK GL PD ++ TL+ + EEA L E+ + D T +AL +Y ++
Sbjct: 392 EMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAE 451
Query: 64 RPKEAMEVLKQ------MESRGFPPSI---------------------------VTYTSL 90
+++ K+ M S G+ +I + Y +
Sbjct: 452 MLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVM 511
Query: 91 ISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
I AY E+A EL M+ + PD TY TL+ +A E+MR G
Sbjct: 512 IKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGY 571
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
+ + A+I + G +V+KE+ PD+V + L+ F G +
Sbjct: 572 VSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMS 631
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEA---GVTPDLSTYNAVLA 267
+ MK AG +N+LI Y++ G D+A A+Y+++L++ PD+ T N ++
Sbjct: 632 YVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMIN 691
Query: 268 ALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITT 327
+ + ++E + M+ R + NE T++ +L Y FE+ +A+++ KI T
Sbjct: 692 LYSERSMVRKAEAIFDSMKQ-RGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILT 750
Query: 328 HAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNA----MLSLYGRKKLVAKT 383
+ +++ + + EA F E GI D +T + ++ L KK V K
Sbjct: 751 DPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKI 810
Query: 384 NKILKFMYESGFTLSLPGYNSLM 406
+I K + G L + +SL+
Sbjct: 811 EEIRKKEIKRGLELWISTLSSLV 833
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/506 (25%), Positives = 219/506 (43%), Gaps = 37/506 (7%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEA--LELFEEIKLAGLRPDMVTYNALLDV 58
++ M+ G D ++ +I + + L L++EI+ L D+ N ++
Sbjct: 219 LIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMG 278
Query: 59 YGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPD 118
+ KS P +A+++L ++ G T S+ISA G EA L ++ + IKP
Sbjct: 279 FAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPR 338
Query: 119 VYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFK 178
Y LL G+V + A + EM G P+ T++ LI Y + G + V K
Sbjct: 339 TRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLK 398
Query: 179 EIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 238
E++A P+ ++ LLA F G + V KEMK G P+R+ +N +I + +
Sbjct: 399 EMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFN 458
Query: 239 SFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYS 298
D A + RML G+ PD T+N ++ + G +E++ ME C P TY+
Sbjct: 459 CLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYN 518
Query: 299 SLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKR 358
++++Y + + ++ M L ++ S I + V TLV V K +A E K
Sbjct: 519 IMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSV 578
Query: 359 GIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKS 418
G+ T NA+++ Y ++ L + + M G
Sbjct: 579 GLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDG------------------------ 614
Query: 419 EMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVAT 478
++P L++ N +I A+ + + EA +L MK+ PDVVTY T +
Sbjct: 615 -----------LKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKA 663
Query: 479 YAANSMFGEAIGVVQCMIKQGCKPDQ 504
F + V + MI GCKPD+
Sbjct: 664 LIRVDKFQKVPVVYEEMIMSGCKPDR 689
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 220/489 (44%), Gaps = 42/489 (8%)
Query: 52 YNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMV 111
Y+ L+ G+S + EA +L Q ++ P +TY +LI A R+ +E+AL L +M
Sbjct: 170 YSILIHALGRSEKLYEAF-LLSQKQT--LTP--LTYNALIGACARNNDIEKALNLIAKMR 224
Query: 112 EKHIKPDVYTYTTLLSGFVNAKKDELAM--RVFEEMRTAGCKPNICTFNALIKMYGDRGM 169
+ + D Y+ ++ + K + M R+++E+ + ++ N +I + G
Sbjct: 225 QDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGD 284
Query: 170 FAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNT 229
++ ++ +A S T ++++ +G E +F+E++++G P +N
Sbjct: 285 PSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNA 344
Query: 230 LISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGR 289
L+ Y + G A ++ M + GV+PD TY+ ++ A G WE + VL EME G
Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 404
Query: 290 CKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAE 349
+PN +S LL + + E++K + +E+ S + ++ KF+ L
Sbjct: 405 VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCL---- 460
Query: 350 HAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLH 409
H +TT + MLS G +N+L+ H
Sbjct: 461 -----------DHAMTTFDRMLS--------------------EGIEPDRVTWNTLIDCH 489
Query: 410 SRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDV 469
+ +E + + +G P +YNI+I +Y + + KR+L +MK +P+V
Sbjct: 490 CKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV 549
Query: 470 VTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHN 529
VT+ T V Y + F +AI ++ M G KP YN++++ Y + L E+A N
Sbjct: 550 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV 609
Query: 530 LSSLDLHVS 538
++S L S
Sbjct: 610 MTSDGLKPS 618
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/464 (23%), Positives = 207/464 (44%), Gaps = 2/464 (0%)
Query: 50 VTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEA--LELK 107
+TYNAL+ ++ ++A+ ++ +M G+ V Y+ +I + R ++ L L
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 108 NQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDR 167
++ ++ DV ++ GF + A+++ + G T ++I D
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS 317
Query: 168 GMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETF 227
G E +F+E++ P +N LL + + G + + EM++ G P+ T+
Sbjct: 318 GRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTY 377
Query: 228 NTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMEN 287
+ LI AY G ++ AR V K M V P+ ++ +LA G W+++ +VL EM++
Sbjct: 378 SLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS 437
Query: 288 GRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAE 347
KP+ Y+ ++ + + + + S I V TL+ + K
Sbjct: 438 IGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIV 497
Query: 348 AEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMY 407
AE F ++RG TT N M++ YG ++ ++L M G ++ + +L+
Sbjct: 498 AEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVD 557
Query: 408 LHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVP 467
++ ++ F + L E+ G++P YN +I AY + G +A M P
Sbjct: 558 VYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKP 617
Query: 468 DVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
++ N+ + + + EA V+Q M + G KPD TY +++
Sbjct: 618 SLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLM 661
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 139/269 (51%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +MKS G+ PD +N +I + + A+ F+ + G+ PD VT+N L+D +
Sbjct: 431 VLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHC 490
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K R A E+ + ME RG P TY +I++Y ++ L +M + I P+V
Sbjct: 491 KHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVV 550
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
T+TTL+ + + + A+ EEM++ G KP+ +NALI Y RG+ + F+ +
Sbjct: 551 THTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVM 610
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ P ++ N+L+ FG++ D+E V + MK G P+ T+ TL+ A R F
Sbjct: 611 TSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKF 670
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAAL 269
+ VY+ M+ +G PD + + +AL
Sbjct: 671 QKVPVVYEEMIMSGCKPDRKARSMLRSAL 699
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 148/303 (48%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +M++ + P+ F+ L++ R +++ ++ +E+K G++PD YN ++D +G
Sbjct: 396 VLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFG 455
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K AM +M S G P VT+ +LI + + G A E+ M + P
Sbjct: 456 KFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCAT 515
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY +++ + + ++ + R+ +M++ G PN+ T L+ +YG G F + + +E+
Sbjct: 516 TYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEM 575
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
K+ P +N L+ + Q GL + F+ M G P N+LI+A+
Sbjct: 576 KSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRD 635
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
+A AV + M E GV PD+ TY ++ AL R +++ V EM CKP+ S L
Sbjct: 636 AEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSML 695
Query: 301 LHA 303
A
Sbjct: 696 RSA 698
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/488 (27%), Positives = 219/488 (44%), Gaps = 51/488 (10%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M G P L T NTL++ +A+ L + + G +P+ VTY +L+V KS +
Sbjct: 184 MVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQ 243
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
AME+L++ME R V Y+ +I +DG L+ A L N+M K K D+ TY T
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNT 303
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
L+ GF NA + + ++ +M PN+ TF+ LI + G E ++ KE+
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
+P+ +T+N+L+ F + E + M G P+ TFN LI+ Y + D
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGL 423
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
+++ M GV + TYN ++ + G E ++K+ EM + R +P+ V+Y LL
Sbjct: 424 ELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483
Query: 305 ANGKEFEKMNALAEEIYSGKITTHAVLLKT---LVLVN-----SKFDFLAEAEHAFLEFK 356
+ E EK A EI+ GKI + L +++++ SK D +A F
Sbjct: 484 CDNGELEK----ALEIF-GKIEKSKMELDIGIYMIIIHGMCNASKVD---DAWDLFCSLP 535
Query: 357 KRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFR 416
+G+ D N M+S RK ++K + + + M E G H+
Sbjct: 536 LKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEG--------------HA------ 575
Query: 417 KSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFV 476
PD ++YNI+I A+ + T A ++ EMK DV T +
Sbjct: 576 ---------------PDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI 620
Query: 477 ATYAANSM 484
++ +
Sbjct: 621 NMLSSGEL 628
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/509 (22%), Positives = 234/509 (45%), Gaps = 2/509 (0%)
Query: 5 MKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M+S+G+A + T + +I+C CR L A +I G PD V +N LL+
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKL-SYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLEC 172
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
R EA+E++ +M G P+++T +L++ +G + +A+ L ++MVE +P+ TY
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYG 232
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
+L+ + + LAM + +M K + ++ +I G +F E++
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
DI+T+NTL+ F G + + + ++M + P TF+ LI ++ + G +A
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
+ K M++ G+ P+ TYN+++ + E++ +++ M + C P+ +T++ L++
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
Y + L E+ + + V TLV + L A+ F E R + D
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILR 423
I + +L + K +I + +S L + Y +++ + +
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFC 532
Query: 424 EILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANS 483
+ KG++ D +YNI+I CR +++A + +M + PD +TYN + + +
Sbjct: 533 SLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDD 592
Query: 484 MFGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
A +++ M G D +T +++
Sbjct: 593 DATTAAELIEEMKSSGFPADVSTVKMVIN 621
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 104/486 (21%), Positives = 221/486 (45%)
Query: 31 EEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSL 90
++A++LF ++ + P ++ +N L K+++ + + + KQMES+G SI T + +
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 91 ISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
I+ + R L A ++++ +PD + TLL+G + A+ + + M G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
KP + T N L+ G ++ + + P+ VT+ +L V ++G +
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
+ ++M+ + ++ +I + GS D A ++ M G D+ TYN ++
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAV 330
G W+ K+L +M + PN VT+S L+ ++ + + + L +E+ I + +
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 331 LLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFM 390
+L+ K + L EA +G DI T N +++ Y + + ++ + M
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429
Query: 391 YESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKM 450
G + YN+L+ ++ ++ + +E++ + + PD++SY I++ C NG++
Sbjct: 430 SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGEL 489
Query: 451 TEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSI 510
+A I +++ D+ Y + S +A + + +G K D YN +
Sbjct: 490 EKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIM 549
Query: 511 VDWYCK 516
+ C+
Sbjct: 550 ISELCR 555
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 178/353 (50%), Gaps = 6/353 (1%)
Query: 4 DMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
+M+ +G D+ T+NTLI C AG +++ +L ++ + P++VT++ L+D + K
Sbjct: 288 EMEIKGFKADIITYNTLIGGFCNAGR-WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKE 346
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
+ +EA ++LK+M RG P+ +TY SLI + ++ LEEA+++ + M+ K PD+ T+
Sbjct: 347 GKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTF 406
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
L++G+ A + + + +F EM G N T+N L++ + G K+F+E+ +
Sbjct: 407 NILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS 466
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
+ PDIV++ LL NG + +F +++++ + + +I D
Sbjct: 467 RRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDD 526
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
A ++ + GV D YN +++ L R +++ + +M P+E+TY+ L+
Sbjct: 527 AWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIR 586
Query: 303 AYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEF 355
A+ + L EE+ S +K ++ + S E + +FL+
Sbjct: 587 AHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSS----GELDKSFLDM 635
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 174/407 (42%), Gaps = 36/407 (8%)
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
L SG V K D+ A+ +F +M + P + FN L + + + K++++
Sbjct: 60 LSSGLVGIKADD-AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKG 118
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
+ I T + ++ F + S ++ + G+ P+ FNTL++ +A
Sbjct: 119 IAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEAL 178
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
+ RM+E G P L T N ++ L G + ++ M +PNEVTY +L+
Sbjct: 179 ELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM 238
Query: 305 ANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDI 364
+ L ++ I AV ++ K L A + F E + +G DI
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 298
Query: 365 TTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILRE 424
T YN+L+ + +LR+
Sbjct: 299 IT-----------------------------------YNTLIGGFCNAGRWDDGAKLLRD 323
Query: 425 ILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSM 484
++++ I P++++++++I ++ + GK+ EA ++L EM P+ +TYN+ + + +
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 485 FGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLS 531
EAI +V MI +GC PD T+N +++ YCK + ++ +S
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 178 bits (452), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 121/519 (23%), Positives = 231/519 (44%), Gaps = 54/519 (10%)
Query: 9 GLAPDLCTFNTLI-SCCRAGSLYE--------------EALELFEEIKLAGLRPDMVTYN 53
G PD+ TFNTL+ C + E EA+ LF+++ GL P ++T+N
Sbjct: 171 GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFN 230
Query: 54 ALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEK 113
L++ R EA ++ +M +G +VTY ++++ + G + AL L ++M E
Sbjct: 231 TLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 290
Query: 114 HIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEM 173
HIKPDV Y+ ++ A +F EM G PN+ T+N +I + G +++
Sbjct: 291 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 350
Query: 174 GKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISA 233
++ +++ + +PD++T+N L++ + G E + EM P+ T+N++I
Sbjct: 351 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYG 410
Query: 234 YSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPN 293
+ + FD A K M + +PD+ T+N ++ R ++ ++L E+ N
Sbjct: 411 FCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Query: 294 EVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFL 353
TY++L+H + E + +NA A+ F
Sbjct: 467 TTTYNTLIHGFC---EVDNLNA--------------------------------AQDLFQ 491
Query: 354 EFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTR 413
E G+ D T N +L + + + + ++ + + S L YN +++ +
Sbjct: 492 EMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGS 551
Query: 414 NFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYN 473
++ + + G+EPD+ +YN++I +C +++A + ++MKD PD TYN
Sbjct: 552 KVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYN 611
Query: 474 TFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
T + ++I ++ M G D T + D
Sbjct: 612 TLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 202/438 (46%), Gaps = 8/438 (1%)
Query: 5 MKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M GL P + TFNTLI+ C G + E A L ++ GL D+VTY +++ K
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAA-ALVNKMVGKGLHIDVVTYGTIVNGMCKMG 275
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
K A+ +L +ME P +V Y+++I +DG +A L ++M+EK I P+V+TY
Sbjct: 276 DTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYN 335
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
++ GF + + A R+ +M P++ TFNALI G E K+ E+
Sbjct: 336 CMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
PD VT+N+++ F ++ + +F M P+ TFNT+I Y R D+
Sbjct: 396 CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEG 451
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM-ENGRCKPNEVTYSSLLH 302
+ + + G+ + +TYN ++ ++ + EM +G C P+ +T + LL+
Sbjct: 452 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC-PDTITCNILLY 510
Query: 303 AYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPH 362
+ ++ E+ L E I KI V ++ K + EA F G+
Sbjct: 511 GFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEP 570
Query: 363 DITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMIL 422
D+ T N M+S + K ++ N + M ++G YN+L+ + KS ++
Sbjct: 571 DVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 630
Query: 423 REILEKGIEPDLISYNIV 440
E+ G D + +V
Sbjct: 631 SEMRSNGFSGDAFTIKMV 648
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 172/369 (46%), Gaps = 41/369 (11%)
Query: 1 MLMDMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L M+ + PD+ ++ +I C+ G + +A LF E+ G+ P++ TYN ++D +
Sbjct: 283 LLSKMEETHIKPDVVIYSAIIDRLCKDGH-HSDAQYLFSEMLEKGIAPNVFTYNCMIDGF 341
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
R +A +L+ M R P ++T+ +LISA V++G L EA +L ++M+ + I PD
Sbjct: 342 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 401
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYG-----DRGM----- 169
TY +++ GF + + A +F+ M + P++ TFN +I +Y D GM
Sbjct: 402 VTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLRE 457
Query: 170 -------------------FAEMGK------VFKEIKACQCSPDIVTWNTLLAVFGQNGL 204
F E+ +F+E+ + PD +T N LL F +N
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 517
Query: 205 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNA 264
E +F+ ++ + + +N +I + D+A ++ + GV PD+ TYN
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 265 VLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGK 324
+++ + + +M++ +P+ TY++L+ E +K L E+ S
Sbjct: 578 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
Query: 325 ITTHAVLLK 333
+ A +K
Sbjct: 638 FSGDAFTIK 646
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 189/448 (42%), Gaps = 91/448 (20%)
Query: 100 LEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNA 159
L++A++ + MV ++ FV + ++A+ ++ +M NI +FN
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 160 LIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLL-------------AVFG---QNG 203
LIK + D + F ++ PD+VT+NTLL A+FG + G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 204 LDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYN 263
E +F +M G P TFNTLI+ G +A A+ +M+ G+ D+ TY
Sbjct: 207 F-LEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 264 AVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSG 323
++ + + G + + +LS+ME KP+ V IYS
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVV------------------------IYSA 301
Query: 324 KITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKT 383
I K ++A++ F E ++GI ++ T N M+
Sbjct: 302 IIDRLC-----------KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID----------- 339
Query: 384 NKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYA 443
G+ S + ++ +LR+++E+ I PD++++N +I A
Sbjct: 340 -----------------GFCSF-------GRWSDAQRLLRDMIEREINPDVLTFNALISA 375
Query: 444 YCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPD 503
+ GK+ EA+++ +EM PD VTYN+ + + ++ F +A + M PD
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPD 431
Query: 504 QNTYNSIVDWYCKLHLREEAYNFVHNLS 531
T+N+I+D YC+ +E + +S
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 135/280 (48%), Gaps = 4/280 (1%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M + + PD T+N++I + +++A +F+ + PD+VT+N ++DVY +++
Sbjct: 391 EMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAK 446
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
R E M++L+++ RG + TY +LI + L A +L +M+ + PD T
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
LL GF +K E A+ +FE ++ + + +N +I E +F +
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
PD+ T+N +++ F S+ + +F +MK G P+ T+NTLI + G D++
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLS 283
+ M G + D T V + G L + +LS
Sbjct: 627 IELISEMRSNGFSGDAFTIKMVADLITDGRLDKSFSDMLS 666
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 102/210 (48%), Gaps = 2/210 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L ++ +GL + T+NTLI C +L A +LF+E+ G+ PD +T N LL +
Sbjct: 454 LLREISRRGLVANTTTYNTLIHGFCEVDNL-NAAQDLFQEMISHGVCPDTITCNILLYGF 512
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
++ + +EA+E+ + ++ V Y +I + ++EA +L + ++PDV
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TY ++SGF A +F +M+ G +P+ T+N LI+ G + ++ E
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVS 209
+++ S D T + + LD S
Sbjct: 633 MRSNGFSGDAFTIKMVADLITDGRLDKSFS 662
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 132/535 (24%), Positives = 238/535 (44%), Gaps = 8/535 (1%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIK-LAGLRPDMVTYNALLDVY 59
+L+ MK +G+ F +++ + L E++ + P +YN +L++
Sbjct: 133 LLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEIL 192
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
K A V M SR PP++ T+ ++ A+ ++ AL L M + P+
Sbjct: 193 VSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNS 252
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
Y TL+ + A+++ EEM GC P+ TFN +I E K+
Sbjct: 253 VIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNR 312
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+ +PD +T+ L+ + G +F + + PE FNTLI + G
Sbjct: 313 MLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGR 368
Query: 240 FDQARAVYKRMLEA-GVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYS 298
D A+AV M+ + G+ PD+ TYN+++ + GL + +VL +M N CKPN +Y+
Sbjct: 369 LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYT 428
Query: 299 SLLHAYAN-GKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKK 357
L+ + GK E N L E G + + V L+ K + EA F E +
Sbjct: 429 ILVDGFCKLGKIDEAYNVLNEMSADG-LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR 487
Query: 358 RGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRK 417
+G D+ T N+++S + +L+ M G + YN+L+ R ++
Sbjct: 488 KGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE 547
Query: 418 SEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVA 477
+ ++ E++ +G D I+YN +I CR G++ +A+ + +M P ++ N +
Sbjct: 548 ARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILIN 607
Query: 478 TYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSS 532
+ M EA+ + M+ +G PD T+NS+++ C+ E+ L +
Sbjct: 608 GLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA 662
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/509 (23%), Positives = 229/509 (44%), Gaps = 5/509 (0%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
DM S+ + P L TF ++ A + + AL L ++ G P+ V Y L+ K
Sbjct: 207 DMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCN 266
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
R EA+++L++M G P T+ +I + + EA ++ N+M+ + PD TY
Sbjct: 267 RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYG 326
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE-IKA 182
L++G + + A +F + KP I FN LI + G + V + + +
Sbjct: 327 YLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTS 382
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
PD+ T+N+L+ + + GL V +M+ G P ++ L+ + + G D+
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
A V M G+ P+ +N +++A + ++ ++ EM CKP+ T++SL+
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS 502
Query: 303 AYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPH 362
E + L ++ S + + V TL+ + + EA E +G P
Sbjct: 503 GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL 562
Query: 363 DITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMIL 422
D T N+++ R V K + + M G S N L+ R+ ++
Sbjct: 563 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQ 622
Query: 423 REILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAAN 482
+E++ +G PD++++N +I CR G++ + + +++ PD VT+NT ++
Sbjct: 623 KEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKG 682
Query: 483 SMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
+A ++ I+ G P+ T++ ++
Sbjct: 683 GFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 181/342 (52%), Gaps = 7/342 (2%)
Query: 1 MLMDM-KSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L DM S G+ PD+CT+N+LI L ALE+ +++ G +P++ +Y L+D +
Sbjct: 375 VLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGF 434
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
K + EA VL +M + G P+ V + LISA+ ++ + EA+E+ +M K KPDV
Sbjct: 435 CKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDV 494
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
YT+ +L+SG + + A+ + +M + G N T+N LI + RG E K+ E
Sbjct: 495 YTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNE 554
Query: 180 IKACQCSP-DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 238
+ Q SP D +T+N+L+ + G + +F++M R G P + N LI+ R G
Sbjct: 555 M-VFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSG 613
Query: 239 SFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYS 298
++A K M+ G TPD+ T+N+++ L R G E + +++ P+ VT++
Sbjct: 614 MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFN 673
Query: 299 SLLHAYANGK-EFEKMNALAEEIYSGKITTH---AVLLKTLV 336
+L+ G ++ L E I G + H ++LL++++
Sbjct: 674 TLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSII 715
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 103/488 (21%), Positives = 207/488 (42%), Gaps = 39/488 (7%)
Query: 44 GLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEA 103
G R Y L+ G + K +L QM+ G + S++ Y + G +
Sbjct: 106 GYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQT 165
Query: 104 LELKNQMVEKH-IKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIK 162
L +M + +P +Y +L V+ ++A VF +M + P + TF ++K
Sbjct: 166 TRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMK 225
Query: 163 MYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVP 222
+ + +++ C P+ V + TL+ + +E + +EM G VP
Sbjct: 226 AFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP 285
Query: 223 ERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVL 282
+ ETFN +I + ++A + RML G PD TY ++ L + G + ++ +
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345
Query: 283 SEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKF 342
+ KP V +++L+H + + A+ + S +T++
Sbjct: 346 YRIP----KPEIVIFNTLIHGFVTHGRLDD----AKAVLSDMVTSY-------------- 383
Query: 343 DFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGY 402
GI D+ T N+++ Y ++ LV ++L M G ++ Y
Sbjct: 384 ----------------GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSY 427
Query: 403 NSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKD 462
L+ + ++ +L E+ G++P+ + +N +I A+C+ ++ EA I EM
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR 487
Query: 463 PAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREE 522
PDV T+N+ ++ A+ +++ MI +G + TYN++++ + + +E
Sbjct: 488 KGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE 547
Query: 523 AYNFVHNL 530
A V+ +
Sbjct: 548 ARKLVNEM 555
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 120/241 (49%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M +G PD+ TFN+LIS + AL L ++ G+ + VTYN L++ + +
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 543
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
KEA +++ +M +G P +TY SLI R G +++A L +M+ P +
Sbjct: 544 EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCN 603
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
L++G + E A+ +EM G P+I TFN+LI G + +F++++A
Sbjct: 604 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 663
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
PD VT+NTL++ + G + + E GFVP T++ L+ + + D+
Sbjct: 664 GIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRR 723
Query: 244 R 244
R
Sbjct: 724 R 724
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/503 (24%), Positives = 228/503 (45%), Gaps = 8/503 (1%)
Query: 9 GLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKE 67
G AP++ TF TLI+ C+ G + + A +LF+ ++ G+ PD++ Y+ L+D Y K+
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEM-DRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGM 339
Query: 68 AMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLS 127
++ Q +G +V ++S I YV+ G L A + +M+ + I P+V TYT L+
Sbjct: 340 GHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIK 399
Query: 128 GFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSP 187
G + A ++ ++ G +P+I T+++LI + G +++++ P
Sbjct: 400 GLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP 459
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVY 247
D+V + L+ + GL +M FN+LI + R FD+A V+
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519
Query: 248 KRMLEAGVTPDLSTYNAVL-AALARGGLWEQSE-----KVLSEMENGRCKPNEVTYSSLL 301
+ M G+ PD++T+ V+ ++ + + ++ M+ + + + ++
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVI 579
Query: 302 HAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIP 361
H E + + GK+ V T++ L EAE F K
Sbjct: 580 HLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFG 639
Query: 362 HDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMI 421
+ TL ++ + + + ++ M E G + Y LM S++ + S +
Sbjct: 640 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 699
Query: 422 LREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAA 481
E+ EKGI P ++SY+I+I C+ G++ EA I ++ D +PDVV Y + Y
Sbjct: 700 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK 759
Query: 482 NSMFGEAIGVVQCMIKQGCKPDQ 504
EA + + M++ G KPD
Sbjct: 760 VGRLVEAALLYEHMLRNGVKPDD 782
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 113/492 (22%), Positives = 218/492 (44%), Gaps = 44/492 (8%)
Query: 32 EALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKE-AMEVLKQMESRGFPPSIVTYTSL 90
+AL+ + G R +V+ N +L G S E A +L + G P++VT+ +L
Sbjct: 235 KALDFHRLVMERGFRVGIVSCNKVLK--GLSVDQIEVASRLLSLVLDCGPAPNVVTFCTL 292
Query: 91 ISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
I+ + + G ++ A +L M ++ I+PD+ Y+TL+ G+ A + ++F + G
Sbjct: 293 INGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGV 352
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
K ++ F++ I +Y G A V+K + SP++VT+ L+ Q+G E G
Sbjct: 353 KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFG 412
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
++ ++ + G P T+++LI + +CG+ A+Y+ M++ G PD+ Y ++ L+
Sbjct: 413 MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLS 472
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAV 330
+ GL + + +M + N V ++SL+ + F+
Sbjct: 473 KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD------------------- 513
Query: 331 LLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNK----- 385
EA F GI D+ T ++ + + K K
Sbjct: 514 ----------------EALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGL 557
Query: 386 -ILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAY 444
+ M + + + N +++L + + ++E +EPD+++YN +I Y
Sbjct: 558 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY 617
Query: 445 CRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQ 504
C ++ EA+RI +K P+ VT + N+ AI + M ++G KP+
Sbjct: 618 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 677
Query: 505 NTYNSIVDWYCK 516
TY ++DW+ K
Sbjct: 678 VTYGCLMDWFSK 689
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 176/417 (42%), Gaps = 46/417 (11%)
Query: 5 MKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M QG++P++ T+ LI C+ G +YE A ++ +I G+ P +VTY++L+D + K
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYE-AFGMYGQILKRGMEPSIVTYSSLIDGFCKCG 440
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ + + M G+PP +V Y L+ + GL+ A+ +M+ + I+ +V +
Sbjct: 441 NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFN 500
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFA------------ 171
+L+ G+ + + A++VF M G KP++ TF ++++ F
Sbjct: 501 SLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLF 560
Query: 172 ---EMGKVFKEIKAC--------QC------------------SPDIVTWNTLLAVFGQN 202
+ K+ +I C +C PDIVT+NT++ +
Sbjct: 561 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 620
Query: 203 GLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTY 262
E +F+ +K F P T LI + D A ++ M E G P+ TY
Sbjct: 621 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 680
Query: 263 NAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYS 322
++ ++ E S K+ EM+ P+ V+YS ++ ++ + +
Sbjct: 681 GCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAID 740
Query: 323 GKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI-PHDITTLNAMLSLYGRKK 378
K+ V L+ K L EA + + G+ P D+ L LS Y K
Sbjct: 741 AKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL--LQRALSEYNPPK 795
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
M M +G P+ T+ L+ E + +LFEE++ G+ P +V+Y+ ++D
Sbjct: 664 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 723
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPD 118
K R EA + Q P +V Y LI Y + G L EA L M+ +KPD
Sbjct: 724 KRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/539 (23%), Positives = 243/539 (45%), Gaps = 21/539 (3%)
Query: 5 MKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M+ + + ++ +FN LI C C L +L F ++ G +PD+VT+N LL
Sbjct: 132 MEIRRIPLNIYSFNILIKCFCDCHKL-SFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLED 190
Query: 64 RPKEAMEVL---------------KQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKN 108
R EA+ + QM G P ++T+ +LI+ +G + EA L N
Sbjct: 191 RISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVN 250
Query: 109 QMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRG 168
+MV K + DV TY T+++G + A+ + +M KP++ ++A+I G
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG 310
Query: 169 MFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFN 228
++ +F E+ +P++ T+N ++ F G S+ + ++M P+ TFN
Sbjct: 311 HHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370
Query: 229 TLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENG 288
LISA + G +A + ML + PD TYN+++ + ++ ++ + M +
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS- 429
Query: 289 RCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEA 348
P+ VT+++++ Y K ++ L EI + + TL+ + D L A
Sbjct: 430 ---PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAA 486
Query: 349 EHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYL 408
+ F E G+ D T N +L + + + + ++ + + S L YN +++
Sbjct: 487 QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG 546
Query: 409 HSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPD 468
+ ++ + + G+EPD+ +YN++I +C +++A + ++MKD PD
Sbjct: 547 MCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPD 606
Query: 469 VVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFV 527
TYNT + ++I ++ M G D T + C++ E N++
Sbjct: 607 NSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDEEIIENYL 665
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 172/369 (46%), Gaps = 41/369 (11%)
Query: 1 MLMDMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L M+ + PD+ ++ +I C+ G + +A LF E+ G+ P++ TYN ++D +
Sbjct: 283 LLSKMEETHIKPDVVIYSAIIDRLCKDGH-HSDAQYLFSEMLEKGIAPNVFTYNCMIDGF 341
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
R +A +L+ M R P ++T+ +LISA V++G L EA +L ++M+ + I PD
Sbjct: 342 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 401
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYG-----DRGM----- 169
TY +++ GF + + A +F+ M + P++ TFN +I +Y D GM
Sbjct: 402 VTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLRE 457
Query: 170 -------------------FAEMGK------VFKEIKACQCSPDIVTWNTLLAVFGQNGL 204
F E+ +F+E+ + PD +T N LL F +N
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 517
Query: 205 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNA 264
E +F+ ++ + + +N +I + D+A ++ + GV PD+ TYN
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 265 VLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGK 324
+++ + + +M++ +P+ TY++L+ E +K L E+ S
Sbjct: 578 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
Query: 325 ITTHAVLLK 333
+ A +K
Sbjct: 638 FSGDAFTIK 646
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 188/432 (43%), Gaps = 59/432 (13%)
Query: 100 LEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNA 159
L++A++ + MV ++ FV + ++A+ ++ +M NI +FN
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 160 LIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAG 219
LIK + D + F ++ PD+VT+NTLL SE +F M G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 220 FVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSE 279
F+ +A A++ +M+E G+TP + T+N ++ L G ++
Sbjct: 207 FL--------------------EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA 246
Query: 280 KVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVN 339
++++M + VTY ++++ + + L ++ I V+ ++
Sbjct: 247 ALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306
Query: 340 SKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSL 399
K ++A++ F E ++GI ++ T N M+
Sbjct: 307 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID--------------------------- 339
Query: 400 PGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNE 459
G+ S + ++ +LR+++E+ I PD++++N +I A + GK+ EA+++ +E
Sbjct: 340 -GFCSF-------GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 391
Query: 460 MKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHL 519
M PD VTYN+ + + ++ F +A + M PD T+N+I+D YC+
Sbjct: 392 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKR 447
Query: 520 REEAYNFVHNLS 531
+E + +S
Sbjct: 448 VDEGMQLLREIS 459
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 198/391 (50%), Gaps = 3/391 (0%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M+ G+ DL ++N +I+C S + AL + ++ G PD+VT ++L++ + + R
Sbjct: 95 MEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNR 154
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+A++++ +ME GF P +V Y ++I + GL+ +A+EL ++M ++ D TY +
Sbjct: 155 VFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNS 214
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
L++G + + A R+ +M PN+ TF A+I ++ G F+E K+++E+
Sbjct: 215 LVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC 274
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
PD+ T+N+L+ +G E + M G +P+ T+NTLI+ + + D+
Sbjct: 275 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGT 334
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
+++ M + G+ D TYN ++ + G + ++++ S M++ +PN TYS LL+
Sbjct: 335 KLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGL 391
Query: 305 ANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDI 364
EK L E + +I ++ K + +A F +G+ D+
Sbjct: 392 CMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDV 451
Query: 365 TTLNAMLSLYGRKKLVAKTNKILKFMYESGF 395
+ M+S + RK+ K++ + + M E G
Sbjct: 452 VSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 209/426 (49%), Gaps = 13/426 (3%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV 71
P + F+ ++S Y+ + LF +++ G+ D+ +YN +++ + R A+ V
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 72 LKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVN 131
+ +M G+ P +VT +SLI+ + + + +A++L ++M E +PDV Y T++ G
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 132 AKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVT 191
A+ +F+ M G + + T+N+L+ G +++ ++ +++ P+++T
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 192 WNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRML 251
+ ++ VF + G SE +++EM R P+ T+N+LI+ G D+A+ + M+
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 252 EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE 311
G PD+ TYN ++ + ++ K+ EM + +TY++++ Y +
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 312 KMNALAEEIYS-----GKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITT 366
A+EI+S I T+++LL L + N + + +A F +K I DITT
Sbjct: 367 A----AQEIFSRMDSRPNIRTYSILLYGLCM-NWRVE---KALVLFENMQKSEIELDITT 418
Query: 367 LNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREIL 426
N ++ + V + + + G + Y +++ R R + KS+++ R++
Sbjct: 419 YNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQ 478
Query: 427 EKGIEP 432
E G+ P
Sbjct: 479 EDGLLP 484
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/443 (22%), Positives = 208/443 (46%), Gaps = 3/443 (0%)
Query: 25 RAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSI 84
R+ EE ++LF ++ + P +V ++ +L KS+ + + ME G +
Sbjct: 45 RSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDL 104
Query: 85 VTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEE 144
+Y +I+ R AL + +M++ +PDV T ++L++GF + A+ + +
Sbjct: 105 YSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK 164
Query: 145 MRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGL 204
M G +P++ +N +I G+ + ++F ++ D VT+N+L+A +G
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 205 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNA 264
S+ + + ++M VP TF +I + + G F +A +Y+ M V PD+ TYN+
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284
Query: 265 VLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGK 324
++ L G ++++++L M C P+ VTY++L++ + K ++ L E+
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 325 ITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTN 384
+ + T++ + A+ F R +I T + +L V K
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKAL 401
Query: 385 KILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAY 444
+ + M +S L + YN +++ + N + + R + KG++PD++SY +I +
Sbjct: 402 VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 461
Query: 445 CRNGKMTEAKRILNEMKDPAPVP 467
CR + ++ + +M++ +P
Sbjct: 462 CRKRQWDKSDLLYRKMQEDGLLP 484
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 97/435 (22%), Positives = 194/435 (44%), Gaps = 44/435 (10%)
Query: 100 LEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNA 159
LEE ++L +M++ P + ++ +LS +K +L + +F M G ++ ++N
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 160 LIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAG 219
+I F V ++ PD+VT ++L+ F Q + + +M+ G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 220 FVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSE 279
F P+ +NT+I + G + A ++ RM GV D TYN+++A L G W +
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 280 KVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVN 339
+++ +M PN +T+++++ + +F
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKF----------------------------- 260
Query: 340 SKFDFLAEAEHAFLEFKKRGIPHDITTLNAM---LSLYGRKKLVAKTNKILKFMYESGFT 396
+EA + E +R + D+ T N++ L ++GR V + ++L M G
Sbjct: 261 ------SEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR---VDEAKQMLDLMVTKGCL 311
Query: 397 LSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRI 456
+ YN+L+ +++ + + RE+ ++G+ D I+YN +I Y + G+ A+ I
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371
Query: 457 LNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
+ M P++ TY+ + N +A+ + + M K + D TYN ++ CK
Sbjct: 372 FSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 428
Query: 517 LHLREEAYNFVHNLS 531
+ E+A++ +LS
Sbjct: 429 IGNVEDAWDLFRSLS 443
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 190/387 (49%), Gaps = 10/387 (2%)
Query: 9 GLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKE 67
G++ DL +F TLI C CR L AL ++ G P +VT+ +L++ + R E
Sbjct: 109 GISHDLYSFTTLIDCFCRCARL-SLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYE 167
Query: 68 AMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLS 127
AM ++ Q+ G+ P++V Y ++I + G + AL++ M + I+PDV TY +L++
Sbjct: 168 AMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLIT 227
Query: 128 GFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSP 187
++ ++ R+ +M G P++ TF+ALI +YG G E K + E+ +P
Sbjct: 228 RLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNP 287
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVY 247
+IVT+N+L+ +GL E V + GF P T+NTLI+ Y + D +
Sbjct: 288 NIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKIL 347
Query: 248 KRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYAN- 306
M GV D TYN + + G + +EKVL M + P+ T++ LL +
Sbjct: 348 CVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDH 407
Query: 307 ---GKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
GK ++ L + I T+ +++K L K D + +A + F +G+ D
Sbjct: 408 GKIGKALVRLEDLQKSKTVVGIITYNIIIKGL----CKADKVEDAWYLFCSLALKGVSPD 463
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFM 390
+ T M+ RK+L + +++ + M
Sbjct: 464 VITYITMMIGLRRKRLWREAHELYRKM 490
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/459 (22%), Positives = 208/459 (45%), Gaps = 35/459 (7%)
Query: 30 YEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTS 89
+ +AL LF ++ + P +V ++ LL K + + + + + +E G + ++T+
Sbjct: 60 FNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTT 119
Query: 90 LISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAG 149
LI + R L AL +M++ +P + T+ +L++GF + + AM + +++ G
Sbjct: 120 LIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLG 179
Query: 150 CKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVS 209
+PN+ +N +I ++G V K +K PD+VT+N+L+ +G +
Sbjct: 180 YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSA 239
Query: 210 GVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAAL 269
+ +M R G P+ TF+ LI Y + G +A+ Y M++ V P++ TYN+++ L
Sbjct: 240 RILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL 299
Query: 270 ARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHA 329
GL ++++KVL+ + + PN VTY++L++ Y K +
Sbjct: 300 CIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDG---------------- 343
Query: 330 VLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKF 389
+K L +++ + G+ D T N + Y + + K+L
Sbjct: 344 --MKILCVMS-----------------RDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGR 384
Query: 390 MYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGK 449
M G + +N L+ K+ + L ++ + +I+YNI+I C+ K
Sbjct: 385 MVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADK 444
Query: 450 MTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEA 488
+ +A + + PDV+TY T + ++ EA
Sbjct: 445 VEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREA 483
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 151/286 (52%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L MK G+ PD+ T+N+LI+ + + + ++ G+ PD++T++AL+DVYG
Sbjct: 206 VLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYG 265
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K + EA + +M R P+IVTY SLI+ GLL+EA ++ N +V K P+
Sbjct: 266 KEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAV 325
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY TL++G+ AK+ + M++ M G + T+N L + Y G F+ KV +
Sbjct: 326 TYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRM 385
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+C PD+ T+N LL +G + ++++++ V T+N +I +
Sbjct: 386 VSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKV 445
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEME 286
+ A ++ + GV+PD+ TY ++ L R LW ++ ++ +M+
Sbjct: 446 EDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQ 491
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 193/450 (42%), Gaps = 16/450 (3%)
Query: 95 VRDGL----LEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
+R GL +AL L M E H P + ++ LL K E + +F + G
Sbjct: 51 LRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGI 110
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
++ +F LI + + ++ P IVT+ +L+ F E
Sbjct: 111 SHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMS 170
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
+ ++ G+ P +NT+I + G + A V K M + G+ PD+ TYN+++ L
Sbjct: 171 LVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLF 230
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE------KMNALAEEIYSGK 324
G W S ++LS+M P+ +T+S+L+ Y GKE + + N + + +
Sbjct: 231 HSGTWGVSARILSDMMRMGISPDVITFSALIDVY--GKEGQLLEAKKQYNEMIQRSVNPN 288
Query: 325 ITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTN 384
I T+ L+ L + L EA+ +G + T N +++ Y + K V
Sbjct: 289 IVTYNSLINGLCI----HGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGM 344
Query: 385 KILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAY 444
KIL M G YN+L + + F +E +L ++ G+ PD+ ++NI++
Sbjct: 345 KILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGL 404
Query: 445 CRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQ 504
C +GK+ +A L +++ V ++TYN + +A + + +G PD
Sbjct: 405 CDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDV 464
Query: 505 NTYNSIVDWYCKLHLREEAYNFVHNLSSLD 534
TY +++ + L EA+ + D
Sbjct: 465 ITYITMMIGLRRKRLWREAHELYRKMQKED 494
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/475 (26%), Positives = 223/475 (46%), Gaps = 15/475 (3%)
Query: 4 DMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
DM G P + T+N +I C C+ G + E A LFEE+K GL PD VTYN+++D +GK
Sbjct: 252 DMIGAGARPTVFTYNIMIDCMCKEGDV-EAARGLFEEMKFRGLVPDTVTYNSMIDGFGKV 310
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
R + + ++M+ P ++TY +LI+ + + G L LE +M +KP+V +Y
Sbjct: 311 GRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSY 370
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
+TL+ F + A++ + +MR G PN T+ +LI G ++ ++ E+
Sbjct: 371 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 430
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
++VT+ L+ E +F +M AG +P ++N LI + + + D+
Sbjct: 431 VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDR 490
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
A + + G+ PDL Y + L E ++ V++EM+ K N + Y++L+
Sbjct: 491 ALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMD 550
Query: 303 AY-ANGKEFEKMNALAE--EI-YSGKITTHAVLLKTLV---LVNSKFDFLAEAEHAFLEF 355
AY +G E ++ L E E+ + T VL+ L LV+ D+ + F
Sbjct: 551 AYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF--- 607
Query: 356 KKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNF 415
G+ + AM+ + V + + M + G Y SLM + + N
Sbjct: 608 ---GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Query: 416 RKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVV 470
++ + ++ E G++ DL++Y +++ ++ +A+ L EM PD V
Sbjct: 665 LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 719
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/503 (22%), Positives = 225/503 (44%), Gaps = 36/503 (7%)
Query: 11 APDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAME 70
P F+ L S + EEA++ F ++K + P + N LL + K + +
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 71 VLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFV 130
K M G P++ TY +I ++G +E A L +M + + PD TY +++ GF
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 308
Query: 131 NAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIV 190
+ + + FEEM+ C+P++ T+NALI + G + ++E+K P++V
Sbjct: 309 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 368
Query: 191 TWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRM 250
+++TL+ F + G+ + + +M+R G VP T+ +LI A + G+ A + M
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428
Query: 251 LEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEF 310
L+ GV ++ TY A++ L +++E++ +M+ PN +Y++L+H + K
Sbjct: 429 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 488
Query: 311 EKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAM 370
+ + L L+N E K RGI D+
Sbjct: 489 D---------------------RALELLN--------------ELKGRGIKPDLLLYGTF 513
Query: 371 LSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGI 430
+ + + ++ M E G + Y +LM + ++ N + +L E+ E I
Sbjct: 514 IWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDI 573
Query: 431 EPDLISYNIVIYAYCRNGKMTEAKRILNEM-KDPAPVPDVVTYNTFVATYAANSMFGEAI 489
E ++++ ++I C+N +++A N + D + + + ++ A
Sbjct: 574 EVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAAT 633
Query: 490 GVVQCMIKQGCKPDQNTYNSIVD 512
+ + M+++G PD+ Y S++D
Sbjct: 634 TLFEQMVQKGLVPDRTAYTSLMD 656
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 161/331 (48%), Gaps = 3/331 (0%)
Query: 3 MDMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGK 61
+DM+ GL P+ T+ +LI C+ G+L +A L E+ G+ ++VTY AL+D
Sbjct: 391 VDMRRVGLVPNEYTYTSLIDANCKIGNL-SDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 449
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYT 121
+ R KEA E+ +M++ G P++ +Y +LI +V+ ++ ALEL N++ + IKPD+
Sbjct: 450 AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 509
Query: 122 YTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK 181
Y T + G + +K E A V EM+ G K N + L+ Y G E + E+K
Sbjct: 510 YGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 569
Query: 182 ACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRA-GFVPERETFNTLISAYSRCGSF 240
+VT+ L+ +N L S+ F + G F +I +
Sbjct: 570 ELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQV 629
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
+ A ++++M++ G+ PD + Y +++ + G ++ + +M K + + Y+SL
Sbjct: 630 EAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSL 689
Query: 301 LHAYANGKEFEKMNALAEEIYSGKITTHAVL 331
+ ++ + +K + EE+ I VL
Sbjct: 690 VWGLSHCNQLQKARSFLEEMIGEGIHPDEVL 720
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 148/339 (43%)
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
C P ++ L +V G+ E F +MKR P+ + N L+ +++ G D +
Sbjct: 188 CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVK 247
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
+K M+ AG P + TYN ++ + + G E + + EM+ P+ VTY+S++ +
Sbjct: 248 RFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 307
Query: 305 ANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDI 364
+ EE+ + L+ KF L + E K G+ ++
Sbjct: 308 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 367
Query: 365 TTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILRE 424
+ + ++ + ++ ++ + K M G + Y SL+ + + N + + E
Sbjct: 368 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNE 427
Query: 425 ILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSM 484
+L+ G+E ++++Y +I C +M EA+ + +M +P++ +YN + +
Sbjct: 428 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 487
Query: 485 FGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEA 523
A+ ++ + +G KPD Y + + C L E A
Sbjct: 488 MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 526
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 197/406 (48%), Gaps = 2/406 (0%)
Query: 5 MKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M++ G++ DL +F LI C CR L L + +KL G RP +VT +LL+ + +
Sbjct: 105 MENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKL-GFRPSIVTLGSLLNGFCQGN 163
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
R +EA+ ++ M+ GF P++V Y ++I+ ++ L ALE+ M +K I+ D TY
Sbjct: 164 RFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYN 223
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
TL+SG N+ + A R+ +M PN+ F ALI + G E ++KE+
Sbjct: 224 TLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR 283
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
P++ T+N+L+ F +G + +F M G P+ T+NTLI+ + + +
Sbjct: 284 SVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDG 343
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
++ M G+ D TYN ++ + G ++KV + M + P+ VTY+ LL
Sbjct: 344 MKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDC 403
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
N + EK + E++ ++ + ++ + D L EA F ++G+ D
Sbjct: 404 LCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPD 463
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLH 409
M+S RK L + +K+ + M E GF S Y+ + H
Sbjct: 464 AIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDH 509
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 154/314 (49%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M+ +G+ D T+NTLIS + +A L ++ + P+++ + AL+D + K
Sbjct: 210 MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 269
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
EA + K+M R P++ TY SLI+ + G L +A + + MV K PDV TY T
Sbjct: 270 LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNT 329
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
L++GF +K+ E M++F EM G + T+N LI Y G KVF + C
Sbjct: 330 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 389
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
SPDIVT+N LL NG + + ++++++ + T+N +I R +A
Sbjct: 390 VSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAW 449
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
+++ + GV PD Y +++ L R GL +++K+ M+ P+E Y L +
Sbjct: 450 CLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDH 509
Query: 305 ANGKEFEKMNALAE 318
E + A E
Sbjct: 510 YTSLSAELIKAAHE 523
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 205/462 (44%), Gaps = 35/462 (7%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV 71
P + F +++ + ++ + L+ +++ G+ D+ ++ L+ + + R A+ +
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 72 LKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVN 131
L +M GF PSIVT SL++ + + +EA+ L + M P+V Y T+++G
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 132 AKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVT 191
+ A+ VF M G + + T+N LI + G + + ++ +++ + P+++
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 192 WNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRML 251
+ L+ F + G E ++KEM R VP T+N+LI+ + G A+ ++ M+
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 252 EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE 311
G PD+ TYN ++ + E K+ EM + TY++L+H Y
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ----- 371
Query: 312 KMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAML 371
+GK+ A+ F G+ DI T N +L
Sbjct: 372 ----------AGKLNV--------------------AQKVFNRMVDCGVSPDIVTYNILL 401
Query: 372 SLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIE 431
+ K +++ + +S + + YN ++ RT +++ + R + KG++
Sbjct: 402 DCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVK 461
Query: 432 PDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYN 473
PD I+Y +I CR G EA ++ MK+ +P Y+
Sbjct: 462 PDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/424 (20%), Positives = 192/424 (45%)
Query: 100 LEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNA 159
++A L +M++ P + +T +L+ K ++ + ++ +M G ++ +F
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 160 LIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAG 219
LI + + + ++ P IVT +LL F Q E + M G
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 220 FVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSE 279
FVP +NT+I+ + + A V+ M + G+ D TYN +++ L+ G W +
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 280 KVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVN 339
++L +M + PN + +++L+ + + L +E+ + + +L+
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Query: 340 SKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSL 399
L +A++ F +G D+ T N +++ + + K V K+ M G
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359
Query: 400 PGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNE 459
YN+L++ + + ++ + +++ G+ PD+++YNI++ C NGK+ +A ++ +
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 419
Query: 460 MKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHL 519
++ D++TYN + EA + + + ++G KPD Y +++ C+ L
Sbjct: 420 LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 479
Query: 520 REEA 523
+ EA
Sbjct: 480 QREA 483
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/489 (21%), Positives = 211/489 (43%), Gaps = 36/489 (7%)
Query: 30 YEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTS 89
+++A LF E+ + P +V + +L V K + + + +ME+ G + ++T
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 90 LISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAG 149
LI + R L AL L +M++ +P + T +LL+GF + + A+ + + M G
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 150 CKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVS 209
PN+ +N +I +VF ++ D VT+NTL++ +G ++ +
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 210 GVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAAL 269
+ ++M + P F LI + + G+ +AR +YK M+ V P++ TYN+++
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Query: 270 ARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHA 329
G ++ + M + C P+ VTY++L+ + K E
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE------------------ 341
Query: 330 VLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKF 389
+ F E +G+ D T N ++ Y + + K+
Sbjct: 342 -----------------DGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 384
Query: 390 MYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGK 449
M + G + + YN L+ K+ +++ ++ + ++ D+I+YNI+I CR K
Sbjct: 385 MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 444
Query: 450 MTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYN- 508
+ EA + + PD + Y T ++ + EA + + M + G P + Y+
Sbjct: 445 LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDE 504
Query: 509 SIVDWYCKL 517
++ D Y L
Sbjct: 505 TLRDHYTSL 513
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 176/394 (44%)
Query: 138 AMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLA 197
A +F EM + P+I F ++ + F + ++ +++ S D+ ++ L+
Sbjct: 63 AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122
Query: 198 VFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTP 257
F + S + +M + GF P T +L++ + + F +A ++ M G P
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 182
Query: 258 DLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALA 317
++ YN V+ L + + +V ME + + VTY++L+ +N + L
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 318 EEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRK 377
++ KI + + L+ K L EA + + E +R + ++ T N++++ +
Sbjct: 243 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302
Query: 378 KLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISY 437
+ + M G + YN+L+ +++ + E+ +G+ D +Y
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362
Query: 438 NIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIK 497
N +I+ YC+ GK+ A+++ N M D PD+VTYN + N +A+ +V+ + K
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422
Query: 498 QGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLS 531
D TYN I+ C+ +EA+ +L+
Sbjct: 423 SEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT 456
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 122/234 (52%), Gaps = 3/234 (1%)
Query: 4 DMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
+M + + P++ T+N+LI+ C G L +A +F+ + G PD+VTYN L+ + KS
Sbjct: 279 EMIRRSVVPNVFTYNSLINGFCIHGCL-GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKS 337
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
+R ++ M++ +M +G TY +LI Y + G L A ++ N+MV+ + PD+ TY
Sbjct: 338 KRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTY 397
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
LL N K E A+ + E+++ + +I T+N +I+ E +F+ +
Sbjct: 398 NILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTR 457
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFN-TLISAYS 235
PD + + T+++ + GL E + + MK GF+P ++ TL Y+
Sbjct: 458 KGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYT 511
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 158/369 (42%)
Query: 170 FAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNT 229
F + +F E+ + P IV + +L V + V ++ +M+ G + +F
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 230 LISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGR 289
LI + RC A A+ +M++ G P + T ++L +G ++++ ++ M+
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 290 CKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAE 349
PN V Y+++++ ++ + + I AV TL+ S +A
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 350 HAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLH 409
+ KR I ++ A++ + ++ + + + K M ++ YNSL+
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Query: 410 SRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDV 469
++ + ++ KG PD+++YN +I +C++ ++ + ++ EM V D
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359
Query: 470 VTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHN 529
TYNT + Y A V M+ G PD TYN ++D C E+A V +
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 419
Query: 530 LSSLDLHVS 538
L ++ V
Sbjct: 420 LQKSEMDVD 428
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 78/154 (50%), Gaps = 2/154 (1%)
Query: 1 MLMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+ +M QGL D T+NTLI C+AG L A ++F + G+ PD+VTYN LLD
Sbjct: 346 LFCEMTYQGLVGDAFTYNTLIHGYCQAGKL-NVAQKVFNRMVDCGVSPDIVTYNILLDCL 404
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
+ + ++A+ +++ ++ I+TY +I R L+EA L + K +KPD
Sbjct: 405 CNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDA 464
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPN 153
Y T++SG A ++ M+ G P+
Sbjct: 465 IAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/462 (25%), Positives = 222/462 (48%), Gaps = 5/462 (1%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ +M G+ D TFNT+I C EA L ++++ G+ PD TYN LL ++
Sbjct: 327 LFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHA 386
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ + A+E +++ G P VT+ +++ + ++ E + +M I+ D +
Sbjct: 387 DAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEH 446
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVF--K 178
+ ++ +VN A +FE + C + T A+I +Y ++G++ E VF K
Sbjct: 447 SVPVIMQMYVNEGLVVQAKALFERFQL-DCVLSSTTLAAVIDVYAEKGLWVEAETVFYGK 505
Query: 179 EIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 238
+ Q + D++ +N ++ +G+ L + +FK MK G P+ T+N+L +
Sbjct: 506 RNMSGQRN-DVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVD 564
Query: 239 SFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYS 298
D+A+ + ML++G P TY A++A+ R GL + + ME KPNEV Y
Sbjct: 565 LVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYG 624
Query: 299 SLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKR 358
SL++ +A E+ + + ++ ++L +L+ SK L EA + + K
Sbjct: 625 SLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDS 684
Query: 359 GIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKS 418
D+ N+MLSL +V++ I + E G T + + ++MYL+ ++
Sbjct: 685 EGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG-TCDVISFATMMYLYKGMGMLDEA 743
Query: 419 EMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEM 460
+ E+ E G+ D S+N V+ Y +G+++E + +EM
Sbjct: 744 IEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEM 785
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 136/539 (25%), Positives = 241/539 (44%), Gaps = 26/539 (4%)
Query: 8 QGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKE 67
Q P++ +N ++ ++E + E+ G+ P TY L+DVYGK+ KE
Sbjct: 139 QSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKE 198
Query: 68 AMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEA-----------LELKNQMVEKHIK 116
A+ +K M R P VT +++ + G + A ++L ++ K
Sbjct: 199 ALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPK 258
Query: 117 PDVYTYTTLLSGF-------VNAKKD-ELAMRVFEEMRTAGCKPNI-CTFNALIKMYGDR 167
L F V A+ E ++ ++ KP + TFN LI +YG
Sbjct: 259 NGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKA 318
Query: 168 GMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETF 227
G + +F E+ D VT+NT++ G +G SE + K+M+ G P+ +T+
Sbjct: 319 GRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTY 378
Query: 228 NTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMEN 287
N L+S ++ G + A Y+++ + G+ PD T+ AVL L + + + E V++EM+
Sbjct: 379 NILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDR 438
Query: 288 GRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAE 347
+ +E + ++ Y N + AL E + + L ++ V ++ E
Sbjct: 439 NSIRIDEHSVPVIMQMYVNEGLVVQAKALFER-FQLDCVLSSTTLAAVIDVYAEKGLWVE 497
Query: 348 AEHAFLEFKKR---GIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNS 404
AE F + KR G +D+ N M+ YG+ KL K + K M G YNS
Sbjct: 498 AETVF--YGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNS 555
Query: 405 LMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPA 464
L + + +++ IL E+L+ G +P +Y +I +Y R G +++A + M+
Sbjct: 556 LFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTG 615
Query: 465 PVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEA 523
P+ V Y + + +A + M EAI + M + G + + S++ Y K+ EEA
Sbjct: 616 VKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEA 674
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 115/472 (24%), Positives = 211/472 (44%), Gaps = 36/472 (7%)
Query: 51 TYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQM 110
T+N L+D+YGK+ R +A + +M G P VT+ ++I G L EA L +M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 111 VEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMF 170
EK I PD TY LLS +A E A+ + ++R G P+ T A++ + R M
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 171 AEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMK-------------- 216
AE+ V E+ D + ++ ++ GL + +F+ +
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVI 486
Query: 217 ----RAGFVPERET-----------------FNTLISAYSRCGSFDQARAVYKRMLEAGV 255
G E ET +N +I AY + ++A +++K M G
Sbjct: 487 DVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGT 546
Query: 256 TPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNA 315
PD TYN++ LA L ++++++L+EM + CKP TY++++ +Y
Sbjct: 547 WPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVD 606
Query: 316 LAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYG 375
L E + + + V+ +L+ ++ + EA F ++ G+ + L +++ Y
Sbjct: 607 LYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYS 666
Query: 376 RKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLI 435
+ + + ++ M +S + NS++ L + ++E I + EKG D+I
Sbjct: 667 KVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGT-CDVI 725
Query: 436 SYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGE 487
S+ ++Y Y G + EA + EM++ + D ++N +A YAA+ E
Sbjct: 726 SFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSE 777
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 188/413 (45%), Gaps = 37/413 (8%)
Query: 9 GLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEA 68
G D+ +N +I L+E+AL LF+ +K G PD TYN+L + EA
Sbjct: 510 GQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEA 569
Query: 69 MEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSG 128
+L +M G P TY ++I++YVR GLL +A++L M + +KP+ Y +L++G
Sbjct: 570 QRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLING 629
Query: 129 FVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPD 188
F + E A++ F M G + N +LIK Y G E +V+ ++K + PD
Sbjct: 630 FAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPD 689
Query: 189 IVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYK 248
+ N++L++ G+ SE +F ++ G + +F T++ Y G D+A V +
Sbjct: 690 VAASNSMLSLCADLGIVSEAESIFNALREKGTC-DVISFATMMYLYKGMGMLDEAIEVAE 748
Query: 249 RMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM--------ENGRCK--------- 291
M E+G+ D +++N V+A A G + ++ EM + G K
Sbjct: 749 EMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKG 808
Query: 292 --PNEVTYSSLLHAYANGKE----------FEKMNALA------EEIYSGKITTHAVLLK 333
P+E S L AY K F M A +E+ SG+I
Sbjct: 809 GVPSEAV-SQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYN 867
Query: 334 TLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKI 386
++ S + A A++ +++G+ DI T ++ +YG+ +V ++
Sbjct: 868 AVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRV 920
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 115/490 (23%), Positives = 220/490 (44%), Gaps = 10/490 (2%)
Query: 29 LYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVL-KQMESRGFPPSIVTY 87
L +A LFE +L + T A++DVY + EA V + G ++ Y
Sbjct: 460 LVVQAKALFERFQLDCVLSS-TTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEY 518
Query: 88 TSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRT 147
+I AY + L E+AL L M + PD TY +L + A R+ EM
Sbjct: 519 NVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLD 578
Query: 148 AGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSE 207
+GCKP T+ A+I Y G+ ++ +++ ++ P+ V + +L+ F ++G+ E
Sbjct: 579 SGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEE 638
Query: 208 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLA 267
F+ M+ G +LI AYS+ G ++AR VY +M ++ PD++ N++L+
Sbjct: 639 AIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLS 698
Query: 268 ALARGGLWEQSEKVLSEM-ENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKIT 326
A G+ ++E + + + E G C + ++++++++ Y ++ +AEE+ +
Sbjct: 699 LCADLGIVSEAESIFNALREKGTC--DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLL 756
Query: 327 THAVLLKTLVLVNSKFDFLAEAEHAFLE-FKKRGIPHDITTLNAMLSLYGRKKLVAKTNK 385
+ ++ + L+E F E +R + D T + +L + + ++
Sbjct: 757 SDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVS 816
Query: 386 ILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYC 445
L+ Y L+ P + ++ S + + +E+ I + +YN VIY Y
Sbjct: 817 QLQTAYNEAKPLATPAITATLF--SAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYS 874
Query: 446 RNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQG-CKPDQ 504
+G + A + M++ PD+VT V Y M E + V + G +P Q
Sbjct: 875 ASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMV-EGVKRVHSRLTFGELEPSQ 933
Query: 505 NTYNSIVDWY 514
+ + ++ D Y
Sbjct: 934 SLFKAVRDAY 943
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 125/527 (23%), Positives = 222/527 (42%), Gaps = 59/527 (11%)
Query: 47 PDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALEL 106
P+++ YN +L G++ + E +M G P+ TY L+ Y + GL++EAL
Sbjct: 143 PNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLW 202
Query: 107 KNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVF---------------EEMRTAGCK 151
M ++ PD T T++ F N+ + + A R F ++ G
Sbjct: 203 IKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKNGSA 262
Query: 152 PNICTFNALIKM-YGDRGMFAEMGKVFKEIKACQCSPD----IVTWNTLLAVFGQNGLDS 206
+ + M G + K SP T+NTL+ ++G+ G +
Sbjct: 263 QSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLN 322
Query: 207 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVL 266
+ + +F EM ++G + TFNT+I G +A ++ K+M E G++PD TYN +L
Sbjct: 323 DAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILL 382
Query: 267 AALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEI--YSGK 324
+ A G E + + ++ P+ VT+ ++LH K ++ A+ E+ S +
Sbjct: 383 SLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIR 442
Query: 325 ITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTN 384
I H+V + + VN + +A+ F F+ + TTL A++ +Y K L
Sbjct: 443 IDEHSVPVIMQMYVNE--GLVVQAKALFERFQLDCVLSS-TTLAAVIDVYAEKGL----- 494
Query: 385 KILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAY 444
++ + T + K M G D++ YN++I AY
Sbjct: 495 ----------------------WVEAETVFYGKRNM-------SGQRNDVLEYNVMIKAY 525
Query: 445 CRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQ 504
+ +A + MK+ PD TYN+ A + EA ++ M+ GCKP
Sbjct: 526 GKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGC 585
Query: 505 NTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEKGRLLERIAE 551
TY +++ Y +L L +A + + + +E G L+ AE
Sbjct: 586 KTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAE 632
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/357 (20%), Positives = 147/357 (41%), Gaps = 23/357 (6%)
Query: 220 FVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSE 279
+VP +N ++ A R G +D+ R + M GV P +TY ++ + GL +++
Sbjct: 141 YVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEAL 200
Query: 280 KVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVN 339
+ M P+EVT ++++ + N EF++ + + +GK+ +
Sbjct: 201 LWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKNG 260
Query: 340 SKFDFLAEAEHAFLEFKKRGI--------------------PHDITTLNAMLSLYGRKKL 379
S + + +E K G P +T N ++ LYG+
Sbjct: 261 SAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGR 320
Query: 380 VAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNI 439
+ + M +SG + +N++++ + ++E +L+++ EKGI PD +YNI
Sbjct: 321 LNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNI 380
Query: 440 VIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQG 499
++ + G + A +++ PD VT+ + M E V+ M +
Sbjct: 381 LLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNS 440
Query: 500 CKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEKGRLLERIAEK--WI 554
+ D+++ I+ Y L +A LD +S +++ AEK W+
Sbjct: 441 IRIDEHSVPVIMQMYVNEGLVVQAKALFERF-QLDCVLSSTTLAAVIDVYAEKGLWV 496
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 161/391 (41%), Gaps = 21/391 (5%)
Query: 136 ELAMRVFEEMRT-AGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNT 194
E +RVF ++ PN+ +N +++ G G + E+ + E+ P T+
Sbjct: 126 ERVLRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGM 185
Query: 195 LLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAG 254
L+ V+G+ GL E K M + P+ T T++ + G FD+A +K
Sbjct: 186 LVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGK 245
Query: 255 VTPDLSTYNAVLAALARGGLWEQ--SEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEK 312
V DL + + + G + + K ME + SL +A+G +
Sbjct: 246 VDLDLDSID----DFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSL--HFASGSDSSP 299
Query: 313 MNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLS 372
++T+ TL+ + K L +A + F E K G+P D T N M+
Sbjct: 300 RKP--------RLTS---TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIH 348
Query: 373 LYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEP 432
G +++ +LK M E G + YN L+ LH+ + + R+I + G+ P
Sbjct: 349 TCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFP 408
Query: 433 DLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVV 492
D +++ V++ C+ + E + ++ EM + D + + Y + +A +
Sbjct: 409 DTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALF 468
Query: 493 QCMIKQGCKPDQNTYNSIVDWYCKLHLREEA 523
+ + C T +++D Y + L EA
Sbjct: 469 E-RFQLDCVLSSTTLAAVIDVYAEKGLWVEA 498
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 60/123 (48%)
Query: 26 AGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIV 85
A LY ALE +E+ + + YNA++ Y S A++ +M+ +G P IV
Sbjct: 840 AMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIV 899
Query: 86 TYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEM 145
T L+ Y + G++E + +++ ++P + + +V+A + +LA V +EM
Sbjct: 900 TQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDAYVSANRQDLADVVKKEM 959
Query: 146 RTA 148
A
Sbjct: 960 SIA 962
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 166/328 (50%)
Query: 6 KSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRP 65
+ G D T+ T++ + E +L +E+ G +P+ VTYN L+ YG++
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 66 KEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTL 125
KEAM V QM+ G P VTY +LI + + G L+ A+++ +M E + PD +TY+ +
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 126 LSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQC 185
++ A A R+F EM GC PN+ TFN +I ++ + K++++++
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGF 530
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
PD VT++ ++ V G G E GVF EM+R +VP+ + L+ + + G+ D+A
Sbjct: 531 QPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQ 590
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA 305
Y+ ML+AG+ P++ T N++L+ R ++ +L M P+ TY+ LL
Sbjct: 591 WYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCT 650
Query: 306 NGKEFEKMNALAEEIYSGKITTHAVLLK 333
+ + M + + H LLK
Sbjct: 651 DARSNFDMGFCGQLMAVSGHPAHMFLLK 678
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 146/296 (49%)
Query: 146 RTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLD 205
R G K + T+ ++ G F E+ K+ E+ C P+ VT+N L+ +G+
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 206 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAV 265
E VF +M+ AG P+R T+ TLI +++ G D A +Y+RM EAG++PD TY+ +
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 266 LAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKI 325
+ L + G + ++ EM C PN VT++ ++ +A + +E L ++ +
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGF 530
Query: 326 TTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNK 385
V ++ V FL EAE F E +++ D ++ L+G+ V K +
Sbjct: 531 QPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQ 590
Query: 386 ILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVI 441
+ M ++G ++P NSL+ R ++ +L+ +L G+ P L +Y +++
Sbjct: 591 WYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 141/267 (52%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +M G P+ T+N LI + +EA+ +F +++ AG PD VTY L+D++
Sbjct: 381 LLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHA 440
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K+ AM++ ++M+ G P TY+ +I+ + G L A L +MV + P++
Sbjct: 441 KAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLV 500
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
T+ +++ A+ E A++++ +M+ AG +P+ T++ ++++ G G E VF E+
Sbjct: 501 TFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEM 560
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ PD + L+ ++G+ G + ++ M +AG P T N+L+S + R
Sbjct: 561 QRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRM 620
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLA 267
+A + + ML G+ P L TY +L+
Sbjct: 621 SEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 140/287 (48%)
Query: 252 EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE 311
+ G D TY ++ L R + + K+L EM CKPN VTY+ L+H+Y +
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK 411
Query: 312 KMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAML 371
+ + ++ V TL+ +++K FL A + ++ G+ D T + ++
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 372 SLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIE 431
+ G+ + +++ M G T +L +N ++ LH++ RN+ + + R++ G +
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQ 531
Query: 432 PDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGV 491
PD ++Y+IV+ G + EA+ + EM+ VPD Y V + +A
Sbjct: 532 PDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQW 591
Query: 492 VQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVS 538
Q M++ G +P+ T NS++ + ++H EAYN + ++ +L LH S
Sbjct: 592 YQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPS 638
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 129/320 (40%), Gaps = 35/320 (10%)
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVY 247
D T+ T++ G+ E++ + EM R G P T+N LI +Y R +A V+
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 248 KRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG 307
+M EAG PD TY ++ A+ G + + + M+ P+ TYS ++
Sbjct: 418 NQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII------ 471
Query: 308 KEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTL 367
N L K L A F E +G ++ T
Sbjct: 472 ------NCLG-----------------------KAGHLPAAHRLFCEMVGQGCTPNLVTF 502
Query: 368 NAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILE 427
N M++L+ + + K+ + M +GF Y+ +M + ++E + E+
Sbjct: 503 NIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQR 562
Query: 428 KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGE 487
K PD Y +++ + + G + +A + M P+V T N+ ++T+ E
Sbjct: 563 KNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSE 622
Query: 488 AIGVVQCMIKQGCKPDQNTY 507
A ++Q M+ G P TY
Sbjct: 623 AYNLLQSMLALGLHPSLQTY 642
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 91/174 (52%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ +M QG P+L TFN +I+ YE AL+L+ +++ AG +PD VTY+ +++V G
Sbjct: 486 LFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLG 545
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+EA V +M+ + + P Y L+ + + G +++A + M++ ++P+V
Sbjct: 546 HCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVP 605
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMG 174
T +LLS F+ + A + + M G P++ T+ L+ D +MG
Sbjct: 606 TCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFDMG 659
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 234/481 (48%), Gaps = 16/481 (3%)
Query: 46 RPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALE 105
R D + Y ++L+V K++ + + VL M+ RG + ++ ++ +Y R G L +AL+
Sbjct: 204 RHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALK 263
Query: 106 LKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYG 165
+ M ++P++ T + FV A + E A+R E M+ G PN+ T+N +I+ Y
Sbjct: 264 VLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYC 323
Query: 166 DRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEM-KRAGFVPER 224
D E ++ +++ + C PD V++ T++ + EV + K+M K G VP++
Sbjct: 324 DLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQ 383
Query: 225 ETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSE 284
T+NTLI ++ D+A K E G D Y+A++ AL + G +++ +++E
Sbjct: 384 VTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINE 443
Query: 285 M-ENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSG----KITTHAVLLKTLVLVN 339
M G C P+ VTY+++++ + E +K L + +++ ++ LL +
Sbjct: 444 MLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTG 503
Query: 340 SKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSL 399
L E + + P+ IT M L KL ++ +++ M GF
Sbjct: 504 KS---LEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKL-SEACDVVREMVLKGF---F 556
Query: 400 PGYNSL-MYLHSRTRNFRKSEM--ILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRI 456
PG + + L S R+ R E + E L KG +++++ VI+ +C+N ++ A +
Sbjct: 557 PGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSV 616
Query: 457 LNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
L++M DV TY T V T EA +++ M+ +G P TY +++ YC+
Sbjct: 617 LDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQ 676
Query: 517 L 517
+
Sbjct: 677 M 677
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 115/522 (22%), Positives = 226/522 (43%), Gaps = 39/522 (7%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M+ G+ P+L NT I + E+AL E +++ G+ P++VTYN ++ Y R
Sbjct: 268 MQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHR 327
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKH-IKPDVYTYT 123
+EA+E+L+ M S+G P V+Y +++ ++ + E +L +M ++H + PD TY
Sbjct: 328 VEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYN 387
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE-IKA 182
TL+ + A+ ++ + G + + ++A++ G +E + E +
Sbjct: 388 TLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSK 447
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
C PD+VT+ ++ F + G + + + M G P ++ L++ R G +
Sbjct: 448 GHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLE 507
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
AR + E +P+ TY+ ++ L R G ++ V+ EM P V + LL
Sbjct: 508 AREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQ 567
Query: 303 AYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPH 362
+ + EE + + V T++ H F + +
Sbjct: 568 SLCRDGRTHEARKFMEECLNKGCAINVVNFTTVI-------------HGFCQNDE----- 609
Query: 363 DITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMIL 422
L+A LS+ L+ K + FT Y +L+ + ++ ++
Sbjct: 610 ----LDAALSVLDDMYLINKHADV--------FT-----YTTLVDTLGKKGRIAEATELM 652
Query: 423 REILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAAN 482
+++L KGI+P ++Y VI+ YC+ GK+ + IL +M + YN +
Sbjct: 653 KKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI--YNQVIEKLCVL 710
Query: 483 SMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAY 524
EA ++ +++ + D T ++++ Y K + AY
Sbjct: 711 GKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAY 752
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 35/171 (20%)
Query: 362 HDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMI 421
HD +ML + + KL + ++L M G + ++ +M +SR R + +
Sbjct: 205 HDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKV 264
Query: 422 LREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAA 481
L + G+EP+L+ N I + R ++ +A R L M+ VP+VVTYN
Sbjct: 265 LTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYN-------- 316
Query: 482 NSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSS 532
CMI+ YC LH EEA + ++ S
Sbjct: 317 ------------CMIR---------------GYCDLHRVEEAIELLEDMHS 340
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 127/494 (25%), Positives = 223/494 (45%), Gaps = 48/494 (9%)
Query: 81 PPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKD---EL 137
PPS + +SAY+ +G AL++ +M+ +KP++ T TLL G V
Sbjct: 128 PPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISS 187
Query: 138 AMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAE-MGKVFKEIKACQCSPDIVTWNTLL 196
A VF++M G N+ TFN L+ Y G + +G + + + + +PD VT+NT+L
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTIL 247
Query: 197 AVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVT 256
+ G S++ + +MK+ G VP R T+N L+ Y + GS +A + + M + V
Sbjct: 248 KAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL 307
Query: 257 PDLSTYNAVLAALARG-----------------------------------GLWEQSEKV 281
PDL TYN ++ L GL ++ K+
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKL 367
Query: 282 LSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEI-----YSGKITTHAVLLKTLV 336
+ +MEN K N+VT++ L ++ E + +E+ +S I T+ L+K +
Sbjct: 368 MEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYL 427
Query: 337 LVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFT 396
V L+ A E ++GI + TLN +L +++ + + + +L ++ GF
Sbjct: 428 KVGD----LSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFI 483
Query: 397 LSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRI 456
+ Y +L+ R K+ + E+ + I P + ++N +I C +GK A
Sbjct: 484 VDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEK 543
Query: 457 LNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
+E+ + +PD T+N+ + Y +A IK KPD T N +++ CK
Sbjct: 544 FDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCK 603
Query: 517 LHLREEAYNFVHNL 530
+ E+A NF + L
Sbjct: 604 EGMTEKALNFFNTL 617
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 134/507 (26%), Positives = 240/507 (47%), Gaps = 43/507 (8%)
Query: 4 DMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEE-IKLAGLRPDMVTYNALLDVYGK 61
DM G++ ++ TFN L++ C G L E+AL + E + + PD VTYN +L K
Sbjct: 194 DMVKIGVSLNVQTFNVLVNGYCLEGKL-EDALGMLERMVSEFKVNPDNVTYNTILKAMSK 252
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYT 121
R + E+L M+ G P+ VTY +L+ Y + G L+EA ++ M + ++ PD+ T
Sbjct: 253 KGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCT 312
Query: 122 YTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK 181
Y L++G NA + + + M++ +P++ T+N LI + G+ E K+ ++++
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQME 372
Query: 182 ACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEM-KRAGFVPERETFNTLISAYSRCGSF 240
+ VT N L + V+ KE+ GF P+ T++TLI AY + G
Sbjct: 373 NDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDL 432
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
A + + M + G+ + T N +L AL + +++ +L+ +EVTY +L
Sbjct: 433 SGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTL 492
Query: 301 LHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLV----------LVNSKFDFLAEAEH 350
+ + ++ EK + +E+ KIT +L+ L KFD LAE+
Sbjct: 493 IMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAES-- 550
Query: 351 AFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYES-GFTLSLPGYNSLMYLH 409
G+ D +T N+++ Y ++ + K +F ES + Y + L+
Sbjct: 551 --------GLLPDDSTFNSIILGYCKE---GRVEKAFEFYNESIKHSFKPDNYTCNILLN 599
Query: 410 S--------RTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMK 461
+ NF + + RE+ D ++YN +I A+C++ K+ EA +L+EM+
Sbjct: 600 GLCKEGMTEKALNFFNTLIEEREV-------DTVTYNTMISAFCKDKKLKEAYDLLSEME 652
Query: 462 DPAPVPDVVTYNTFVATYAANSMFGEA 488
+ PD TYN+F++ + E
Sbjct: 653 EKGLEPDRFTYNSFISLLMEDGKLSET 679
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 131/515 (25%), Positives = 250/515 (48%), Gaps = 22/515 (4%)
Query: 10 LAPDLCTFNTL-ISCCRAGSLYE--EALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPK 66
L P+L T NTL I R S + A E+F+++ G+ ++ T+N L++ Y + +
Sbjct: 162 LKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLE 221
Query: 67 EAMEVLKQMESR-GFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTL 125
+A+ +L++M S P VTY +++ A + G L + EL M + + P+ TY L
Sbjct: 222 DALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNL 281
Query: 126 LSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQC 185
+ G+ + A ++ E M+ P++CT+N LI + G E ++ +K+ +
Sbjct: 282 VYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKL 341
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
PD+VT+NTL+ + GL E + ++M+ G + T N IS C ++ A
Sbjct: 342 QPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHN--ISLKWLCKE-EKREA 398
Query: 246 VYKRMLE----AGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL 301
V +++ E G +PD+ TY+ ++ A + G + +++ EM K N +T +++L
Sbjct: 399 VTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTIL 458
Query: 302 HAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIP 361
A ++ ++ + L + V TL++ + + + +A + E KK I
Sbjct: 459 DALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKIT 518
Query: 362 HDITTLNAM---LSLYGRKKLVAKTNKILKF--MYESGFTLSLPGYNSLMYLHSRTRNFR 416
++T N++ L +G+ +L + KF + ESG +NS++ + +
Sbjct: 519 PTVSTFNSLIGGLCHHGKTELAME-----KFDELAESGLLPDDSTFNSIILGYCKEGRVE 573
Query: 417 KSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFV 476
K+ E ++ +PD + NI++ C+ G +A N + + V D VTYNT +
Sbjct: 574 KAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMI 632
Query: 477 ATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
+ + + EA ++ M ++G +PD+ TYNS +
Sbjct: 633 SAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFI 667
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 209/459 (45%), Gaps = 39/459 (8%)
Query: 1 MLMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L+DMK GL P+ T+N L+ C+ GSL +EA ++ E +K + PD+ TYN L++
Sbjct: 262 LLLDMKKNGLVPNRVTYNNLVYGYCKLGSL-KEAFQIVELMKQTNVLPDLCTYNILINGL 320
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
+ +E +E++ M+S P +VTY +LI GL EA +L QM +K +
Sbjct: 321 CNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQ 380
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEM-RTAGCKPNICTFNALIKMYGDRGMFAEMGKVFK 178
T+ L +K E R +E+ G P+I T++ LIK Y G + ++ +
Sbjct: 381 VTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMR 440
Query: 179 EIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 238
E+ + +T NT+L + E + + GF+ + T+ TLI + R
Sbjct: 441 EMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREE 500
Query: 239 SFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYS 298
++A ++ M + +TP +ST+N+++ L G E + + E+ P++ T++
Sbjct: 501 KVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFN 560
Query: 299 SLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKR 358
S++ Y EK A E Y+ I +H+F
Sbjct: 561 SIILGYCKEGRVEK----AFEFYNESI-----------------------KHSF------ 587
Query: 359 GIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKS 418
D T N +L+ ++ + K + E + YN+++ + + +++
Sbjct: 588 --KPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEA 644
Query: 419 EMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRIL 457
+L E+ EKG+EPD +YN I +GK++E +L
Sbjct: 645 YDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELL 683
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 179/400 (44%), Gaps = 40/400 (10%)
Query: 152 PNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG- 210
P+ F+ + Y G ++F+++ + P+++T NTLL + +S
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 211 --VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRML-EAGVTPDLSTYNAVLA 267
VF +M + G +TFN L++ Y G + A + +RM+ E V PD TYN +L
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 268 ALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITT 327
A+++ G +++L +M+ PN VTY++L++ Y K+ +L E ++
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYC------KLGSLKEAFQIVELMK 302
Query: 328 HAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKIL 387
+L L N + L A + + ++AM SL + +V N ++
Sbjct: 303 QTNVLPDLCTYNILINGLCNA---------GSMREGLELMDAMKSLKLQPDVVT-YNTLI 352
Query: 388 KFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRN 447
+E G +L ++ ++ ++ G++ + +++NI + C+
Sbjct: 353 DGCFELGLSL-------------------EARKLMEQMENDGVKANQVTHNISLKWLCKE 393
Query: 448 GKMTEAKRILNEMKD-PAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNT 506
K R + E+ D PD+VTY+T + Y A+ +++ M ++G K + T
Sbjct: 394 EKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTIT 453
Query: 507 YNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEKGRLL 546
N+I+D CK +EA+N +++ V E G L+
Sbjct: 454 LNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLI 493
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 109/249 (43%), Gaps = 36/249 (14%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +G D T+ TLI E+ALE+++E+K + P + T+N+L+
Sbjct: 473 LLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLC 532
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ + AME ++ G P T+ S+I Y ++G +E+A E N+ ++ KPD Y
Sbjct: 533 HHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNY 592
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
T LL+G E A+ FN LI+ +E+
Sbjct: 593 TCNILLNGLCKEGMTEKALNF---------------FNTLIEE--------------REV 623
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
D VT+NT+++ F ++ E + EM+ G P+R T+N+ IS G
Sbjct: 624 -------DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKL 676
Query: 241 DQARAVYKR 249
+ + K+
Sbjct: 677 SETDELLKK 685
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 107/231 (46%), Gaps = 7/231 (3%)
Query: 325 ITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRK-KLVAKT 383
+ T LL LV S F ++ A F + K G+ ++ T N +++ Y + KL
Sbjct: 166 LLTCNTLLIGLVRYPSSFS-ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDAL 224
Query: 384 NKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYA 443
+ + + E YN+++ S+ + +L ++ + G+ P+ ++YN ++Y
Sbjct: 225 GMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYG 284
Query: 444 YCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPD 503
YC+ G + EA +I+ MK +PD+ TYN + E + ++ M +PD
Sbjct: 285 YCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPD 344
Query: 504 QNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEKGRLLERIAEKWI 554
TYN+++D +L L EA + + + + ++ + I+ KW+
Sbjct: 345 VVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQ-----VTHNISLKWL 390
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 218/469 (46%), Gaps = 38/469 (8%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV 71
P + F L++ ++ + L + +++ G+ D+ T N L++ + +S +P A
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129
Query: 72 LKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVN 131
L +M GF P IVT+TSLI+ + +EEA+ + NQMVE IKPDV YTT++
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189
Query: 132 AKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVT 191
A+ +F++M G +P++ + +L+ + G + + + + + + PD++T
Sbjct: 190 NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249
Query: 192 WNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRML 251
+N L+ F + G + ++ EM R P T+ +LI+ + G D+AR ++ M
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 252 EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE 311
G PD+ Y +++ + + + K+ EM N +TY++L+ + +
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFG---QVG 366
Query: 312 KMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAML 371
K N +A+E++S ++ RG+P +I T N +L
Sbjct: 367 KPN-VAQEVFSHMVS-------------------------------RGVPPNIRTYNVLL 394
Query: 372 SLYGRKKLVAKTNKILKFMYE---SGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEK 428
V K I + M + G ++ YN L++ K+ M+ ++ ++
Sbjct: 395 HCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454
Query: 429 GIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVA 477
++ +I+Y I+I C+ GK+ A + + P+VVTY T ++
Sbjct: 455 EMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMIS 503
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 219/466 (46%), Gaps = 48/466 (10%)
Query: 5 MKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
++ G++ DL T N L++C C++ Y + L + +KL G PD+VT+ +L++ +
Sbjct: 98 LQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKL-GFEPDIVTFTSLINGFCLGN 156
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
R +EAM ++ QM G P +V YT++I + ++G + AL L +QM I+PDV YT
Sbjct: 157 RMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYT 216
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
+L++G N+ + A + M KP++ TFNALI + G F + +++ E+
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
+P+I T+ +L+ F G E +F M+ G P+ + +LI+ + +C D A
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDA 336
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
++ M + G+T + TY ++ + G +++V S M + PN TY+ LLH
Sbjct: 337 MKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHC 396
Query: 304 YA-NGKE------FEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFK 356
NGK FE M + + I T+ VLL L N K L +A F + +
Sbjct: 397 LCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCY-NGK---LEKALMVFEDMR 452
Query: 357 KRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFR 416
KR + DI + + + G K N + F SLP
Sbjct: 453 KREM--DIGIITYTIIIQGMCKAGKVKNAVNLF-------CSLP---------------- 487
Query: 417 KSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKD 462
KG++P++++Y +I R G EA + +MK+
Sbjct: 488 ----------SKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 155/290 (53%), Gaps = 5/290 (1%)
Query: 1 MLMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
M+ M G+ PD+ + T+I S C+ G + AL LF++++ G+RPD+V Y +L++
Sbjct: 164 MVNQMVEMGIKPDVVMYTTIIDSLCKNGHV-NYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
S R ++A +L+ M R P ++T+ +LI A+V++G +A EL N+M+ I P++
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
+TYT+L++GF + A ++F M T GC P++ + +LI + + K+F E
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+ + + +T+ TL+ FGQ G + VF M G P T+N L+ G
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK 402
Query: 240 FDQARAVYKRMLEA---GVTPDLSTYNAVLAALARGGLWEQSEKVLSEME 286
+A +++ M + GV P++ TYN +L L G E++ V +M
Sbjct: 403 VKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMR 452
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/495 (21%), Positives = 215/495 (43%), Gaps = 32/495 (6%)
Query: 30 YEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTS 89
+ EAL+LF + + P ++ + LL+V K ++ + + ++ G + T
Sbjct: 53 FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 90 LISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAG 149
L++ + + A +M++ +PD+ T+T+L++GF + E AM + +M G
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 150 CKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVS 209
KP++ + +I G +F +++ PD+V + +L+ +G +
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 210 GVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAAL 269
+ + M + P+ TFN LI A+ + G F A +Y M+ + P++ TY +++
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 270 ARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHA 329
G +++ ++ ME C P+ V Y+SL++ + K+ + + E+ +T +
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 330 VLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKF 389
+ TL+ + A+ F RG+P +I T N +L V K I +
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412
Query: 390 MYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGK 449
M +K EM G+ P++ +YN++++ C NGK
Sbjct: 413 M-------------------------QKREM-------DGVAPNIWTYNVLLHGLCYNGK 440
Query: 450 MTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNS 509
+ +A + +M+ ++TY + A+ + + +G KP+ TY +
Sbjct: 441 LEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTT 500
Query: 510 IVDWYCKLHLREEAY 524
++ + L+ EA+
Sbjct: 501 MISGLFREGLKHEAH 515
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/445 (22%), Positives = 196/445 (44%), Gaps = 7/445 (1%)
Query: 95 VRDGL----LEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
+R+GL EAL+L MVE P + +T LL+ KK ++ + + + ++ G
Sbjct: 44 LRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGV 103
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
++ T N L+ + ++ PDIVT+ +L+ F E
Sbjct: 104 SHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMS 163
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
+ +M G P+ + T+I + + G + A +++ +M G+ PD+ Y +++ L
Sbjct: 164 MVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLC 223
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAV 330
G W ++ +L M + KP+ +T+++L+ A+ +F L E+ I +
Sbjct: 224 NSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIF 283
Query: 331 LLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFM 390
+L+ + EA F + +G D+ ++++ + + K V KI M
Sbjct: 284 TYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343
Query: 391 YESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKM 450
+ G T + Y +L+ + ++ + ++ +G+ P++ +YN++++ C NGK+
Sbjct: 344 SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKV 403
Query: 451 TEAKRILNEMKD---PAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTY 507
+A I +M+ P++ TYN + N +A+ V + M K+ TY
Sbjct: 404 KKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITY 463
Query: 508 NSIVDWYCKLHLREEAYNFVHNLSS 532
I+ CK + A N +L S
Sbjct: 464 TIIIQGMCKAGKVKNAVNLFCSLPS 488
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 133/257 (51%), Gaps = 5/257 (1%)
Query: 4 DMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
+M +AP++ T+ +LI+ C G + +EA ++F ++ G PD+V Y +L++ + K
Sbjct: 272 EMIRMSIAPNIFTYTSLINGFCMEGCV-DEARQMFYLMETKGCFPDVVAYTSLINGFCKC 330
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
++ +AM++ +M +G + +TYT+LI + + G A E+ + MV + + P++ TY
Sbjct: 331 KKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTY 390
Query: 123 TTLLSGFVNAKKDELAMRVFEEMR---TAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
LL K + A+ +FE+M+ G PNI T+N L+ G + VF++
Sbjct: 391 NVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFED 450
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
++ + I+T+ ++ + G +F + G P T+ T+IS R G
Sbjct: 451 MRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGL 510
Query: 240 FDQARAVYKRMLEAGVT 256
+A ++++M E GV+
Sbjct: 511 KHEAHVLFRKMKEDGVS 527
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 201/437 (45%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M G P L T N L++ +A+ L + + G +P+ VTY +L V KS +
Sbjct: 168 MVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
AME+L++ME R V Y+ +I +DG L+ A L N+M K K D+ YTT
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
L+ GF A + + ++ +M P++ F+ALI + G E ++ KE+
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
SPD VT+ +L+ F + + + + M G P TFN LI+ Y + D
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL 407
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
++++M GV D TYN ++ G E ++++ EM + R +P+ V+Y LL
Sbjct: 408 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Query: 305 ANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDI 364
+ E EK + E+I K+ + ++ + +A F +G+ D+
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDV 527
Query: 365 TTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILRE 424
T N M+ +K +++ + + + M E G + + YN L+ H + KS ++ E
Sbjct: 528 KTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE 587
Query: 425 ILEKGIEPDLISYNIVI 441
I G D + +V+
Sbjct: 588 IKRCGFSVDASTVKMVV 604
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 112/508 (22%), Positives = 232/508 (45%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M+ +G+A +L T + +I+CC A +I G PD VT++ L++ R
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
EA+E++ +M G P+++T +L++ +G + +A+ L ++MVE +P+ TY
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
+L + + LAM + +M K + ++ +I G +F E++
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
DI+ + TL+ F G + + + ++M + P+ F+ LI + + G +A
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
++K M++ G++PD TY +++ + +++ +L M + C PN T++ L++ Y
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397
Query: 305 ANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDI 364
+ L ++ + V TL+ + L A+ F E R + DI
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDI 457
Query: 365 TTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILRE 424
+ +L K +I + + +S L + YN +++ + +
Sbjct: 458 VSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 517
Query: 425 ILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSM 484
+ KG++PD+ +YNI+I C+ G ++EA + +M++ P+ TYN + +
Sbjct: 518 LPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGD 577
Query: 485 FGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
++ +++ + + G D +T +VD
Sbjct: 578 ATKSAKLIEEIKRCGFSVDASTVKMVVD 605
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/505 (21%), Positives = 229/505 (45%), Gaps = 35/505 (6%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV 71
P L F+ L S Y+ L+L ++++L G+ ++ T + +++ + R+ A
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 72 LKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVN 131
+ ++ G+ P VT+++LI+ +G + EALEL ++MVE KP + T L++G
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 132 AKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVT 191
K A+ + + M G +PN T+ ++K+ G A ++ ++++ + D V
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 192 WNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRML 251
++ ++ ++G +F EM+ GF + + TLI + G +D + + M+
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 252 EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE 311
+ +TPD+ ++A++ + G ++E++ EM P+ VTY+SL+ + + +
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 312 KMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAML 371
K N + + + S +G +I T N ++
Sbjct: 370 KANHMLDLMVS-----------------------------------KGCGPNIRTFNILI 394
Query: 372 SLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIE 431
+ Y + L+ ++ + M G YN+L+ ++ + +E++ + +
Sbjct: 395 NGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVR 454
Query: 432 PDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGV 491
PD++SY I++ C NG+ +A I +++ D+ YN + S +A +
Sbjct: 455 PDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 514
Query: 492 VQCMIKQGCKPDQNTYNSIVDWYCK 516
+ +G KPD TYN ++ CK
Sbjct: 515 FCSLPLKGVKPDVKTYNIMIGGLCK 539
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 179/372 (48%), Gaps = 37/372 (9%)
Query: 1 MLMDMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L M+ + + D ++ +I C+ GSL + A LF E+++ G + D++ Y L+ +
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSL-DNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
+ R + ++L+ M R P +V +++LI +V++G L EA EL +M+++ I PD
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYG-----DRGM----- 169
TYT+L+ GF + + A + + M + GC PNI TFN LI Y D G+
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412
Query: 170 -------------------FAEMGKV------FKEIKACQCSPDIVTWNTLLAVFGQNGL 204
F E+GK+ F+E+ + + PDIV++ LL NG
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472
Query: 205 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNA 264
+ +F++++++ + +N +I D A ++ + GV PD+ TYN
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532
Query: 265 VLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGK 324
++ L + G +++ + +ME PN TY+ L+ A+ + K L EEI
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592
Query: 325 ITTHAVLLKTLV 336
+ A +K +V
Sbjct: 593 FSVDASTVKMVV 604
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/500 (21%), Positives = 219/500 (43%), Gaps = 35/500 (7%)
Query: 31 EEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSL 90
++A++LF+E+ + RP ++ ++ L V ++++ +++ KQME +G ++ T + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 91 ISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
I+ R L A ++++ +PD T++TL++G + A+ + + M G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
KP + T NAL+ G ++ + + P+ VT+ +L V ++G +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
+ ++M+ + ++ +I + GS D A ++ M G D+ Y ++
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAV 330
G W+ K+L +M + P+ V +S+L+ + + GK
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF---------------VKEGK------ 332
Query: 331 LLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFM 390
L EAE E +RGI D T +++ + ++ + K N +L M
Sbjct: 333 --------------LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 391 YESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKM 450
G ++ +N L+ + + + R++ +G+ D ++YN +I +C GK+
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 451 TEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSI 510
AK + EM PD+V+Y + N +A+ + + + K + D YN I
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 511 VDWYCKLHLREEAYNFVHNL 530
+ C ++A++ +L
Sbjct: 499 IHGMCNASKVDDAWDLFCSL 518
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 151/318 (47%), Gaps = 35/318 (11%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L DM + + PD+ F+ LI C EA EL +E+ G+ PD VTY +L+D +
Sbjct: 304 LLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFC 363
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K + +A +L M S+G P+I T+ LI+ Y + L+++ LEL +M + + D
Sbjct: 364 KENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY TL+ GF K E+A +F+EM + +P+I ++ L+ D G + ++F++I
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 181 KACQ----------------------------CS-------PDIVTWNTLLAVFGQNGLD 205
+ + CS PD+ T+N ++ + G
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543
Query: 206 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAV 265
SE +F++M+ G P T+N LI A+ G ++ + + + G + D ST V
Sbjct: 544 SEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMV 603
Query: 266 LAALARGGLWEQSEKVLS 283
+ L+ G L + +LS
Sbjct: 604 VDMLSDGRLKKSFLDMLS 621
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/408 (22%), Positives = 186/408 (45%), Gaps = 1/408 (0%)
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
L SG V+ K+D+ A+ +F+EM + +P + F+ L + + + + K+++
Sbjct: 44 LRSGIVDIKEDD-AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKG 102
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
+ ++ T + ++ + S ++ + G+ P+ TF+TLI+ G +A
Sbjct: 103 IAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEAL 162
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
+ RM+E G P L T NA++ L G + ++ M +PNEVTY +L
Sbjct: 163 ELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVM 222
Query: 305 ANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDI 364
+ L ++ KI AV ++ K L A + F E + +G DI
Sbjct: 223 CKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 282
Query: 365 TTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILRE 424
++ + K+L+ M + T + +++L+ + R++E + +E
Sbjct: 283 IIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKE 342
Query: 425 ILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSM 484
++++GI PD ++Y +I +C+ ++ +A +L+ M P++ T+N + Y ++
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 485 FGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSS 532
+ + + + M +G D TYN+++ +C+L E A + S
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVS 450
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/544 (21%), Positives = 246/544 (45%), Gaps = 35/544 (6%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
DM P + F+ L S Y+ L L ++++L G+ ++ T + +++ + + R
Sbjct: 78 DMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCR 137
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ A + ++ G+ P+ +T+++LI+ +G + EALEL ++MVE KPD+ T
Sbjct: 138 KLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITIN 197
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFA------------ 171
TL++G + K+ AM + ++M GC+PN T+ ++ + G A
Sbjct: 198 TLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Query: 172 -----------------------EMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEV 208
+F E++ + +I+T+N L+ F G +
Sbjct: 258 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDG 317
Query: 209 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAA 268
+ + ++M + P TF+ LI ++ + G +A ++K M+ G+ PD TY +++
Sbjct: 318 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 377
Query: 269 LARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTH 328
+ +++ +++ M + C PN T++ L++ Y + L ++ +
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVAD 437
Query: 329 AVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILK 388
V TL+ + L A+ F E R +P +I T +L K +I +
Sbjct: 438 TVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFE 497
Query: 389 FMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNG 448
+ +S L + YN +++ + + + KG++P + +YNI+I C+ G
Sbjct: 498 KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG 557
Query: 449 KMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYN 508
++EA+ + +M++ PD TYN + + + +++ +++ + + G D +T
Sbjct: 558 PLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIK 617
Query: 509 SIVD 512
++D
Sbjct: 618 MVID 621
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/486 (20%), Positives = 222/486 (45%)
Query: 31 EEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSL 90
++A++LF ++ + P ++ ++ L K+++ + + KQME +G ++ T + +
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 91 ISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
I+ + R L A ++++ +P+ T++TL++G + A+ + + M G
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
KP++ T N L+ G AE + ++ C P+ VT+ +L V ++G +
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
+ ++M+ + ++ +I + GS D A ++ M G+T ++ TYN ++
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAV 330
G W+ K+L +M + PN VT+S L+ ++ + + L +E+ I +
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369
Query: 331 LLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFM 390
+L+ K + L +A +G +I T N +++ Y + + ++ + M
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Query: 391 YESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKM 450
G YN+L+ ++ + +E++ + + P++++Y I++ C NG+
Sbjct: 430 SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGES 489
Query: 451 TEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSI 510
+A I +++ D+ YN + S +A + + +G KP TYN +
Sbjct: 490 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIM 549
Query: 511 VDWYCK 516
+ CK
Sbjct: 550 IGGLCK 555
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 104/467 (22%), Positives = 209/467 (44%)
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ +A+++ + M P+++ ++ L SA + + L L QM K I ++YT +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
+++ F +K LA ++ G +PN TF+ LI G +E ++ +
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
PD++T NTL+ +G ++E + +M G P T+ +++ + G A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
+ ++M E + D Y+ ++ L + G + + + +EME N +TY+ L+
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
+ N ++ L ++ KI + V L+ K L EAE E RGI D
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILR 423
T +++ + ++ + K N+++ M G ++ +N L+ + + + R
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 424 EILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANS 483
++ +G+ D ++YN +I +C GK+ AK + EM P++VTY + N
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487
Query: 484 MFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
+A+ + + + K + D YN I+ C ++A++ +L
Sbjct: 488 ESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 534
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 175/379 (46%), Gaps = 72/379 (18%)
Query: 1 MLMDMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L M+ + + D ++ +I C+ GSL + A LF E+++ G+ +++TYN L+ +
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSL-DNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
+ R + ++L+ M R P++VT++ LI ++V++G L EA EL +M+ + I PD
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYG-----DRGM----- 169
TYT+L+ GF + A ++ + M + GC PNI TFN LI Y D G+
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Query: 170 -------------------FAEMGKV------FKEIKACQCSPDIVTWNTLLAVFGQNGL 204
F E+GK+ F+E+ + + P+IVT+ LL NG
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Query: 205 DSEVSGVFKEMKRA-----------------------------------GFVPERETFNT 229
+ +F++++++ G P +T+N
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548
Query: 230 LISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGR 289
+I + G +A ++++M E G PD TYN ++ A G +S K++ E++
Sbjct: 549 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 608
Query: 290 CKPNEVTYSSLLHAYANGK 308
+ T ++ ++G+
Sbjct: 609 FSVDASTIKMVIDMLSDGR 627
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 142/281 (50%), Gaps = 2/281 (0%)
Query: 4 DMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
+M +G+APD T+ +LI C+ L ++A ++ + + G P++ T+N L++ Y K+
Sbjct: 358 EMIHRGIAPDTITYTSLIDGFCKENHL-DKANQMVDLMVSKGCDPNIRTFNILINGYCKA 416
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
R + +E+ ++M RG VTY +LI + G L A EL +MV + + P++ TY
Sbjct: 417 NRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTY 476
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
LL G + + E A+ +FE++ + + +I +N +I + + +F +
Sbjct: 477 KILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
P + T+N ++ + G SE +F++M+ G P+ T+N LI A+ G +
Sbjct: 537 KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATK 596
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLS 283
+ + + + G + D ST V+ L+ G L + +LS
Sbjct: 597 SVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDMLS 637
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/441 (21%), Positives = 181/441 (41%), Gaps = 74/441 (16%)
Query: 95 VRDGLLE----EALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
+R GL++ +A++L M+ P V ++ L S K+ +L + + ++M G
Sbjct: 60 LRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGI 119
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
N+ T + +I + C+C L F G
Sbjct: 120 AHNLYTLSIMINCF------------------CRC-------RKLCLAFSAMG------- 147
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
++ + G+ P TF+TLI+ G +A + RM+E G PDL T N ++ L
Sbjct: 148 ---KIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLC 204
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAV 330
G ++ ++ +M C+PN VTY +L+ + L ++ I AV
Sbjct: 205 LSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264
Query: 331 LLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFM 390
++ K L A + F E + +GI +I T
Sbjct: 265 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIIT------------------------ 300
Query: 391 YESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKM 450
YN L+ + +LR+++++ I P++++++++I ++ + GK+
Sbjct: 301 -----------YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 349
Query: 451 TEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSI 510
EA+ + EM PD +TY + + + + +A +V M+ +GC P+ T+N +
Sbjct: 350 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 409
Query: 511 VDWYCKLHLREEAYNFVHNLS 531
++ YCK + ++ +S
Sbjct: 410 INGYCKANRIDDGLELFRKMS 430
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 148/584 (25%), Positives = 243/584 (41%), Gaps = 80/584 (13%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
+K P T+N LI + A + E+ LA LR D T K +
Sbjct: 226 LKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGK 285
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+EA+ ++ E+ F P V YT LIS L EEA++ N+M P+V TY+T
Sbjct: 286 WREALTLV---ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYST 342
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
LL G +N K+ RV M GC P+ FN+L+ Y G + K+ K++ C
Sbjct: 343 LLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCG 402
Query: 185 CSPDIVTWNTLLAVF--GQNGLDSEV----SGVFKEMKRAGFVPERETFNTLISAYSRC- 237
P V +N L+ ++ L+ ++ + EM AG V + +S+++RC
Sbjct: 403 HMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN----VSSFTRCL 458
Query: 238 ---GSFDQARAVYKRMLEAGVTPDLSTYNAVLAAL------------------------- 269
G +++A +V + M+ G PD STY+ VL L
Sbjct: 459 CSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADV 518
Query: 270 ----------ARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEE 319
+ GL EQ+ K +EM C PN VTY++L+HAY K+ N L E
Sbjct: 519 YTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFET 578
Query: 320 IYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKL 379
+ S + V L+ + K + E A F++ D+ ++ Y
Sbjct: 579 MLSEGCLPNIVTYSALIDGHCK---AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNS- 634
Query: 380 VAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNI 439
+ N + Y +L+ ++ ++ +L + +G EP+ I Y+
Sbjct: 635 -ERPNVV--------------TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDA 679
Query: 440 VIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQG 499
+I C+ GK+ EA+ + EM + + TY++ + Y A V+ M++
Sbjct: 680 LIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 739
Query: 500 CKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEKG 543
C P+ Y ++D CK+ +EAY + + EEKG
Sbjct: 740 CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM---------EEKG 774
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 130/516 (25%), Positives = 229/516 (44%), Gaps = 38/516 (7%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
++ +M QG PD T++ +++ S E A LFEE+K GL D+ TY ++D +
Sbjct: 470 VIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 529
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K+ ++A + +M G P++VTYT+LI AY++ + A EL M+ + P++
Sbjct: 530 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIV 589
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCK------------------PNICTFNALIK 162
TY+ L+ G A + E A ++FE M G K PN+ T+ AL+
Sbjct: 590 TYSALIDGHCKAGQVEKACQIFERM--CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLD 647
Query: 163 MYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVP 222
+ E K+ + C P+ + ++ L+ + G E V EM GF
Sbjct: 648 GFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPA 707
Query: 223 ERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVL 282
T+++LI Y + D A V +MLE P++ Y ++ L + G +++ K++
Sbjct: 708 TLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 767
Query: 283 SEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKF 342
ME C+PN VTY++++ + + E L E + S + + V + L+ K
Sbjct: 768 QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKN 827
Query: 343 DFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNK----ILKFMYESGFTLS 398
L A + E K+ P G +K++ NK L + E G +
Sbjct: 828 GALDVAHNLLEEMKQTHWPTHTA---------GYRKVIEGFNKEFIESLGLLDEIGQDDT 878
Query: 399 LPGYNSLMYLHSRTRNFRKSEMILREILEKG-IEPDLI----SYNIVIYAYCRNGKMTEA 453
P + L ++ EM LR + E L+ +YN +I + C K+ A
Sbjct: 879 APFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETA 938
Query: 454 KRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAI 489
++ +EM +P++ ++ + + NS EA+
Sbjct: 939 FQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 129/562 (22%), Positives = 250/562 (44%), Gaps = 30/562 (5%)
Query: 4 DMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
+M + G+ + ++ C C AG YE+A + E+ G PD TY+ +L+ +
Sbjct: 438 EMLAAGVVLNKINVSSFTRCLCSAGK-YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNA 496
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
+ + A + ++M+ G + TYT ++ ++ + GL+E+A + N+M E P+V TY
Sbjct: 497 SKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTY 556
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
T L+ ++ AKK A +FE M + GC PNI T++ALI + G + ++F+ +
Sbjct: 557 TALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCG 616
Query: 183 CQCSPD----------------IVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERET 226
+ PD +VT+ LL F ++ E + M G P +
Sbjct: 617 SKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIV 676
Query: 227 FNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEME 286
++ LI + G D+A+ V M E G L TY++++ + + + KVLS+M
Sbjct: 677 YDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736
Query: 287 NGRCKPNEVTYSSLLHAYAN-GK---EFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKF 342
C PN V Y+ ++ GK ++ M + E+ + T+ ++ ++
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796
Query: 343 DFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGY 402
L E +G+ + T ++ + + + +L+ M ++ + GY
Sbjct: 797 TCLELLER----MGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGY 852
Query: 403 NSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKD 462
+ + + F +S +L EI + P L Y ++I + ++ A R+L E+
Sbjct: 853 RKV--IEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 910
Query: 463 -PAPVPDV-VTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLR 520
A + D TYN+ + + + A + M K+G P+ ++ S++ +
Sbjct: 911 FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKI 970
Query: 521 EEAYNFVHNLSSLDLHVSEEEK 542
EA + +S +++ EE+K
Sbjct: 971 SEALLLLDFISHMEIQWIEEKK 992
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/567 (20%), Positives = 223/567 (39%), Gaps = 99/567 (17%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M++ P++ T++TL+ C + + + G P +N+L+ Y S
Sbjct: 328 MRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGD 387
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRD--------------------------- 97
A ++LK+M G P V Y LI + D
Sbjct: 388 HSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLN 447
Query: 98 --------------GLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFE 143
G E+A + +M+ + PD TY+ +L+ NA K ELA +FE
Sbjct: 448 KINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFE 507
Query: 144 EMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNG 203
EM+ G ++ T+ ++ + G+ + K F E++ C+P++VT+ L+ + +
Sbjct: 508 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK 567
Query: 204 LDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYN 263
S + +F+ M G +P T++ LI + + G ++A +++RM + PD+ Y
Sbjct: 568 KVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY- 626
Query: 264 AVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSG 323
+ ++ +PN VTY +LL + E+ L + +
Sbjct: 627 ------------------FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 668
Query: 324 KITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKT 383
+ ++ L+ K L EA+ E + G P + T ++++ Y + K
Sbjct: 669 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 728
Query: 384 NKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYA 443
+K+L M LE P+++ Y +I
Sbjct: 729 SKVLSKM-----------------------------------LENSCAPNVVIYTEMIDG 753
Query: 444 YCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPD 503
C+ GK EA +++ M++ P+VVTY + + + +++ M +G P+
Sbjct: 754 LCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPN 813
Query: 504 QNTYNSIVDWYCKLHLREEAYNFVHNL 530
TY ++D CK A + HNL
Sbjct: 814 YVTYRVLIDHCCK----NGALDVAHNL 836
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 125/539 (23%), Positives = 223/539 (41%), Gaps = 64/539 (11%)
Query: 44 GLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEA 103
G + YNAL+D+ + K E L+Q+ L+ + R+G A
Sbjct: 160 GYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIA 219
Query: 104 LELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAG-------------- 149
LE ++ + +P TY L+ F+ A + + A + EM A
Sbjct: 220 LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYS 279
Query: 150 -CK-----------------PNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVT 191
CK P+ + LI + +F E ++A C P++VT
Sbjct: 280 LCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVT 339
Query: 192 WNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRML 251
++TLL V M G P + FN+L+ AY G A + K+M+
Sbjct: 340 YSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMV 399
Query: 252 EAGVTPDLSTYNAVLAALA------RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA 305
+ G P YN ++ ++ L + +EK SEM N++ SS
Sbjct: 400 KCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLC 459
Query: 306 NGKEFEK-MNALAEEIYSGKITTHAVLLKTL-VLVNSKFDFLAEAEHAFL---EFKKRGI 360
+ ++EK + + E I G I + K L L N+ ++ E AFL E K+ G+
Sbjct: 460 SAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNA-----SKMELAFLLFEEMKRGGL 514
Query: 361 PHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEM 420
D+ T M+ + + L+ + K M E G T ++ Y +L++ + + + +
Sbjct: 515 VADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANE 574
Query: 421 ILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPD------------ 468
+ +L +G P++++Y+ +I +C+ G++ +A +I M VPD
Sbjct: 575 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNS 634
Query: 469 ----VVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEA 523
VVTY + + + EA ++ M +GC+P+Q Y++++D CK+ +EA
Sbjct: 635 ERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA 693
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 145/350 (41%), Gaps = 27/350 (7%)
Query: 225 ETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSE 284
E N L+ + R GSF A R+ + P STYN ++ A + + + + E
Sbjct: 201 EFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHRE 260
Query: 285 MENGRCKPNEVTYSSLLHAYAN-GKEFEKMNALAEEIYSGKITTHAVLLKTLV---LVNS 340
M + + T ++ GK E + + E + + L+ L L
Sbjct: 261 MSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEE 320
Query: 341 KFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLP 400
DFL + ++ T + +L KK + + ++L M G S
Sbjct: 321 AMDFLN-------RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPK 373
Query: 401 GYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGK------MTEAK 454
+NSL++ + + + + +L+++++ G P + YNI+I + C + + A+
Sbjct: 374 IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAE 433
Query: 455 RILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWY 514
+ +EM V + + ++F + + +A V++ MI QG PD +TY+ ++++
Sbjct: 434 KAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 493
Query: 515 CKLHLREEAY---------NFVHNLSSLDLHVSEEEKGRLLERIAEKWIN 555
C E A+ V ++ + + V K L+E+ A KW N
Sbjct: 494 CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ-ARKWFN 542
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 138/535 (25%), Positives = 242/535 (45%), Gaps = 60/535 (11%)
Query: 52 YNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEE--ALELKNQ 109
YNA++ VY +S + +A E++ M RG P ++++ +LI+A ++ G L A+EL +
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 110 MVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGM 169
+ ++PD TY TLLS + A++VFE+M C+P++ T+NA+I +YG G+
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 170 FAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNT 229
AE ++F E++ PD VT+N+LL F + +V V+++M++ GF + T+NT
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 230 LISAYSRCGSFDQARAVYK------------------------------------RMLEA 253
+I Y + G D A +YK ML+
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDV 467
Query: 254 GVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKM 313
G+ P L TY+A++ A+ G E++E S M KP+ + YS +L G E K
Sbjct: 468 GIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKA 527
Query: 314 NALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKR-GI-PHDITTL---N 368
L ++ S T L + ++L K + + + + ++ G+ P +I+++
Sbjct: 528 WGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKG 587
Query: 369 AMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEK 428
L R+ VA TN G+ L S++ +S + ++ +L + E
Sbjct: 588 ECFDLAARQLKVAITN---------GYELENDTLLSILGSYSSSGRHSEAFELLEFLKEH 638
Query: 429 GIEPDLISYNIVIYAYCRNGKMTEAKRILNE-MKDPAP----VPDVVTYNTFVATYAANS 483
+ +I +C+ ++ A L+E DP Y T + AN
Sbjct: 639 ASGSKRLITEALIVLHCKVNNLSAA---LDEYFADPCVHGWCFGSSTMYETLLHCCVANE 695
Query: 484 MFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVS 538
+ EA V + GC+ ++ S+V YCKL E A+ V+ + H +
Sbjct: 696 HYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFA 750
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 133/587 (22%), Positives = 257/587 (43%), Gaps = 73/587 (12%)
Query: 2 LMDM-KSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
L+DM ++ GL PD T+NTL+S C S + A+++FE+++ +PD+ TYNA++ VYG
Sbjct: 284 LLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYG 343
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ EA + ++E +GF P VTY SL+ A+ R+ E+ E+ QM + D
Sbjct: 344 RCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEM 403
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMR-TAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TY T++ + + +LA++++++M+ +G P+ T+ LI G E + E
Sbjct: 404 TYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSE 463
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+ P + T++ L+ + + G E F M R+G P+ ++ ++ R
Sbjct: 464 MLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNE 523
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
+A +Y+ M+ G TP + Y ++ L + + +K + +ME C N + SS
Sbjct: 524 TRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEE-LCGMNPLEISS 582
Query: 300 LL--------------HAYANGKEFEK---MNALAEEIYSGK----------ITTHA--- 329
+L A NG E E ++ L SG+ + HA
Sbjct: 583 VLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGS 642
Query: 330 --VLLKTLVLVNSKFDFL-------------------------------------AEAEH 350
++ + L++++ K + L AEA
Sbjct: 643 KRLITEALIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQ 702
Query: 351 AFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSL-PGYNSLMYLH 409
F + + G + +M+ +Y + ++++ GF + P Y ++ +
Sbjct: 703 VFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAY 762
Query: 410 SRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDV 469
+ + ++K+E ++ + + G PDL ++N ++ AY + G A+ I N M P P V
Sbjct: 763 GKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTV 822
Query: 470 VTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
+ N + + E VV+ + G K +++ ++D + +
Sbjct: 823 ESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFAR 869
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 141/608 (23%), Positives = 261/608 (42%), Gaps = 74/608 (12%)
Query: 5 MKSQGLAPDLCTFNTLISC-CRAGSLYEE-ALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
M+ +G PDL +FNTLI+ ++G L A+EL + ++ +GLRPD +TYN LL +
Sbjct: 251 MRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRD 310
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
A++V + ME+ P + TY ++IS Y R GL EA L ++ K PD TY
Sbjct: 311 SNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTY 370
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
+LL F + E V+++M+ G + T+N +I MYG +G +++K++K
Sbjct: 371 NSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKG 430
Query: 183 CQC-SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFD 241
+PD +T+ L+ G+ E + + EM G P +T++ LI Y++ G +
Sbjct: 431 LSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKRE 490
Query: 242 QAR-----------------------------------AVYKRMLEAGVTPDLSTYNAVL 266
+A +Y+ M+ G TP + Y ++
Sbjct: 491 EAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMI 550
Query: 267 AALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH--------------AYANGKEFEK 312
L + + +K + +ME C N + SS+L A NG E E
Sbjct: 551 LGLMKENRSDDIQKTIRDMEE-LCGMNPLEISSVLVKGECFDLAARQLKVAITNGYELEN 609
Query: 313 ---MNALAEEIYSGK----------ITTHA-----VLLKTLVLVNSKFDFLAEA-EHAFL 353
++ L SG+ + HA ++ + L++++ K + L+ A + F
Sbjct: 610 DTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFA 669
Query: 354 EFKKRGIPHDITTL-NAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRT 412
+ G +T+ +L + A+ +++ + SG S S++ ++ +
Sbjct: 670 DPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKL 729
Query: 413 RNFRKSEMILREILEKGIEPDLIS-YNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVT 471
+ ++ + KG Y +I AY + +A+ ++ ++ PD+ T
Sbjct: 730 GFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKT 789
Query: 472 YNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLS 531
+N+ ++ YA + A + M++ G P + N ++ C EE Y V L
Sbjct: 790 WNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQ 849
Query: 532 SLDLHVSE 539
+ +S+
Sbjct: 850 DMGFKISK 857
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/496 (21%), Positives = 224/496 (45%), Gaps = 36/496 (7%)
Query: 17 FNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQME 76
+ TL+ CC A Y EA ++F +++L+G +++ VY K P+ A +V+ Q E
Sbjct: 684 YETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAE 743
Query: 77 SRGFPPSIV-TYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKD 135
++GF + YT +I AY + L ++A
Sbjct: 744 TKGFHFACSPMYTDIIEAYGKQKLWQKA-------------------------------- 771
Query: 136 ELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTL 195
V +R +G P++ T+N+L+ Y G + +F + SP + + N L
Sbjct: 772 ---ESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINIL 828
Query: 196 LAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGV 255
L +G E+ V +E++ GF + + ++ A++R G+ + + +Y M AG
Sbjct: 829 LHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGY 888
Query: 256 TPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNA 315
P + Y ++ L +G +E ++SEME K ++S+L Y ++++K
Sbjct: 889 LPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQ 948
Query: 316 LAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYG 375
+ + I + TL+++ + E + + G+ + T +++S +G
Sbjct: 949 VYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFG 1008
Query: 376 RKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLI 435
++K + + ++ + + G L Y+++M + + + K+E +L+ + GIEP L
Sbjct: 1009 KQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLA 1068
Query: 436 SYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCM 495
+ ++++ +Y +G EA+++L+ +KD + Y++ + Y + + I + M
Sbjct: 1069 TMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEM 1128
Query: 496 IKQGCKPDQNTYNSIV 511
K+G +PD + V
Sbjct: 1129 KKEGLEPDHRIWTCFV 1144
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/468 (22%), Positives = 215/468 (45%), Gaps = 46/468 (9%)
Query: 51 TYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALE--LKN 108
T ++L Y S R EA E+L+ ++ + +LI + + L AL+ +
Sbjct: 611 TLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFAD 670
Query: 109 QMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRG 168
V Y TLL V + A +VF ++R +GC+ + +++ +Y G
Sbjct: 671 PCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLG 730
Query: 169 MFAEMGKVFKEIKA----CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPER 224
+V + + CSP + ++ +G+ L + V ++++G P+
Sbjct: 731 FPETAHQVVNQAETKGFHFACSP---MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDL 787
Query: 225 ETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSE 284
+T+N+L+SAY++CG +++ARA++ M+ G +P + + N +L AL G E+ V+ E
Sbjct: 788 KTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEE 847
Query: 285 MENGRCKPNEVTYSSLLHAYAN-GKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFD 343
+++ K ++ + +L A+A G FE ++IYS
Sbjct: 848 LQDMGFKISKSSILLMLDAFARAGNIFE-----VKKIYSS-------------------- 882
Query: 344 FLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYN 403
K G I M+ L + K V ++ M E+ F + L +N
Sbjct: 883 -----------MKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWN 931
Query: 404 SLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDP 463
S++ +++ +++K+ + + I E G+EPD +YN +I YCR+ + E ++ +M++
Sbjct: 932 SMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNL 991
Query: 464 APVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
P + TY + ++ + +A + + ++ +G K D++ Y++++
Sbjct: 992 GLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMM 1039
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 116/559 (20%), Positives = 240/559 (42%), Gaps = 51/559 (9%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ M+++ +G PD T+N+L+ E+ E++++++ G D +TYN ++ +YG
Sbjct: 354 LFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYG 413
Query: 61 KSRRPKEAMEVLKQMES-RGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
K + A+++ K M+ G P +TYT LI + + EA L ++M++ IKP +
Sbjct: 414 KQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTL 473
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TY+ L+ G+ A K E A F M +G KP+ ++ ++ + + ++++
Sbjct: 474 QTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRD 533
Query: 180 IKACQCSPDIVTWN-TLLAVFGQNGLDS-----------------EVSGVF--------- 212
+ + +P + +L + +N D E+S V
Sbjct: 534 MISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLA 593
Query: 213 -KEMKRA---GFVPERETFNTLISAYSRCGSFDQARAVY----------KRMLEAGVTPD 258
+++K A G+ E +T +++ +YS G +A + KR++ +
Sbjct: 594 ARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVL 653
Query: 259 LSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAE 318
N + AAL E +G C + Y +LLH + + + + +
Sbjct: 654 HCKVNNLSAAL--------DEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFS 705
Query: 319 EIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTL-NAMLSLYGRK 377
++ + K++V+V K F A + + +G + + ++ YG++
Sbjct: 706 DLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQ 765
Query: 378 KLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISY 437
KL K ++ + +SG T L +NSLM +++ + ++ I ++ G P + S
Sbjct: 766 KLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESI 825
Query: 438 NIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIK 497
NI+++A C +G++ E ++ E++D + + +A E + M
Sbjct: 826 NILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKA 885
Query: 498 QGCKPDQNTYNSIVDWYCK 516
G P Y +++ CK
Sbjct: 886 AGYLPTIRLYRMMIELLCK 904
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 162/349 (46%), Gaps = 42/349 (12%)
Query: 189 IVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAV-- 246
+ +N ++ V+ ++G S+ + M++ G VP+ +FNTLI+A + G AV
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 247 YKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYAN 306
+ +G+ PD TYN +L+A +R + + KV +ME RC+P+ TY++++ Y
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYG- 343
Query: 307 GKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITT 366
+ AEAE F+E + +G D T
Sbjct: 344 ----------------------------------RCGLAAEAERLFMELELKGFFPDAVT 369
Query: 367 LNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREIL 426
N++L + R++ K ++ + M + GF YN++++++ + + + +++
Sbjct: 370 YNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDM- 428
Query: 427 EKGIE---PDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANS 483
KG+ PD I+Y ++I + + + EA +++EM D P + TY+ + YA
Sbjct: 429 -KGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAG 487
Query: 484 MFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSS 532
EA CM++ G KPD Y+ ++D + + +A+ ++ S
Sbjct: 488 KREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMIS 536
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 190/403 (47%), Gaps = 14/403 (3%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+++ G PDL T+N+L+S YE A +F + G P + + N LL
Sbjct: 777 NLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDG 836
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
R +E V+++++ GF S + ++ A+ R G + E ++ + M P + Y
Sbjct: 837 RLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYR 896
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
++ K+ A + EM A K + +N+++KMY + + +V++ IK
Sbjct: 897 MMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKET 956
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
PD T+NTL+ ++ ++ E + ++M+ G P+ +T+ +LISA+ + +QA
Sbjct: 957 GLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQA 1016
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
+++ +L G+ D S Y+ ++ G ++EK+L M+N +P T L+ +
Sbjct: 1017 EQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVS 1076
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEH-----AFLEFKKR 358
Y++ ++ AE++ S T V L TL + +L ++ LE KK
Sbjct: 1077 YSSSGNPQE----AEKVLSNLKDTE-VELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKE 1131
Query: 359 GI--PHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSL 399
G+ H I T + + ++K+ + +LK + + GF L +
Sbjct: 1132 GLEPDHRIWTCFVRAASFSKEKI--EVMLLLKALEDIGFDLPI 1172
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/514 (22%), Positives = 213/514 (41%), Gaps = 62/514 (12%)
Query: 30 YEEALELFEEIKLAGLR-PDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYT 88
++ ALE+FE + L P+ A+L V G+ + A+E+ + E + Y
Sbjct: 171 WQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPT-VGDRVQVYN 229
Query: 89 SLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTA 148
+++ Y R G +A EL + MR
Sbjct: 230 AMMGVYSRSGKFSKAQEL-----------------------------------VDAMRQR 254
Query: 149 GCKPNICTFNALIKMYGDRGMFAE--MGKVFKEIKACQCSPDIVTWNTLLAVFGQNG-LD 205
GC P++ +FN LI G ++ ++ PD +T+NTLL+ ++ LD
Sbjct: 255 GCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLD 314
Query: 206 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAV 265
V VF++M+ P+ T+N +IS Y RCG +A ++ + G PD TYN++
Sbjct: 315 GAVK-VFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSL 373
Query: 266 LAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIY---- 321
L A AR E+ ++V +M+ +E+TY++++H Y + + LA ++Y
Sbjct: 374 LYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLD----LALQLYKDMK 429
Query: 322 --SGK---ITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGR 376
SG+ T+ VL+ +L K + EA E GI + T +A++ Y +
Sbjct: 430 GLSGRNPDAITYTVLIDSL----GKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAK 485
Query: 377 KKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLIS 436
+ M SG Y+ ++ + R RK+ + R+++ G P
Sbjct: 486 AGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTL 545
Query: 437 YNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMI 496
Y ++I + + + ++ + +M++ + + + V F A ++ I
Sbjct: 546 YELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLV----KGECFDLAARQLKVAI 601
Query: 497 KQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
G + + +T SI+ Y EA+ + L
Sbjct: 602 TNGYELENDTLLSILGSYSSSGRHSEAFELLEFL 635
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 123/236 (52%), Gaps = 2/236 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
M+ +M+ +L +N+++ A Y++ +++++ IK GL PD TYN L+ +Y
Sbjct: 914 MVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYC 973
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ RRP+E +++QM + G P + TY SLISA+ + LE+A +L +++ K +K D
Sbjct: 974 RDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRS 1033
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
Y T++ ++ D A ++ + M+ AG +P + T + L+ Y G E KV +
Sbjct: 1034 FYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNL 1093
Query: 181 KACQCSPDIVTWNTLL-AVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYS 235
K + + +++++ A +S + + EMK+ G P+ + + A S
Sbjct: 1094 KDTEVELTTLPYSSVIDAYLRSKDYNSGIERLL-EMKKEGLEPDHRIWTCFVRAAS 1148
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 136/539 (25%), Positives = 236/539 (43%), Gaps = 29/539 (5%)
Query: 35 ELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAY 94
+ EE+K G+ D + L+ Y K ++A+E +M+ P + TY ++
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVM 172
Query: 95 VRDGLL-EEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPN 153
+R+ + A + N+M++ + P++YT+ L+ G + A ++F++M G PN
Sbjct: 173 MREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPN 232
Query: 154 ICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFK 213
T+ LI RG + K+F E++ PD V N LL F + G E + +
Sbjct: 233 RVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLR 292
Query: 214 EMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGG 273
++ GFV +++LI R + QA +Y ML+ + PD+ Y ++ L++ G
Sbjct: 293 LFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAG 352
Query: 274 LWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLK 333
E + K+LS M + P+ Y++++ A E+ +L E+ + A
Sbjct: 353 KIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHT 412
Query: 334 TLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYES 393
L+ + + EAE F E +K G + T NA++ + + + +L M E
Sbjct: 413 ILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM-EV 471
Query: 394 GFTLSLPGYNSLMYLHSRTRNFR---------KSEMILREILEKGIEPDLISYNIVIYAY 444
G SL L HS R+F K+ L + G PD++SYN++I +
Sbjct: 472 GRPASL----FLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGF 527
Query: 445 CRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQ 504
CR G + A ++LN ++ PD VTYNT + EA + K +
Sbjct: 528 CRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYA--KDDFRHSP 585
Query: 505 NTYNSIVDWYCKLHLREEAYN----FVHNLSSLDLHVSEE--------EKGRLLERIAE 551
Y S++ W C+ A+N ++ +S LD + E E R L R+ E
Sbjct: 586 AVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIE 644
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 221/479 (46%), Gaps = 33/479 (6%)
Query: 1 MLMDMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
M DM +G++P+ T+ LIS C+ GS ++A +LF E++ +G PD V +NALLD +
Sbjct: 220 MFDDMTGRGISPNRVTYTILISGLCQRGSA-DDARKLFYEMQTSGNYPDSVAHNALLDGF 278
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
K R EA E+L+ E GF + Y+SLI R +A EL M++K+IKPD+
Sbjct: 279 CKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDI 338
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
YT L+ G A K E A+++ M + G P+ +NA+IK RG+ E + E
Sbjct: 339 ILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLE 398
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+ + PD T L+ +NGL E +F E++++G P TFN LI + G
Sbjct: 399 MSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGE 458
Query: 240 FDQARAVYKRMLEAGVTPDL-----STYNAVLAALARGGLWEQSEKVLSEMENGRCKPNE 294
+AR + +M E G L + N + G ++ + L+ + P+
Sbjct: 459 LKEARLLLHKM-EVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDI 517
Query: 295 VTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAF-L 353
V+Y+ L++ + + + L + ++ +V TL+ + + E AF L
Sbjct: 518 VSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLI---NGLHRVGREEEAFKL 574
Query: 354 EFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTR 413
+ K H ++++ RK+ K+L F L + + L T
Sbjct: 575 FYAKDDFRHSPAVYRSLMTWSCRKR------KVL-----VAFNLWMKYLKKISCLDDETA 623
Query: 414 N-----FR--KSEMILREILEKGIEPD---LISYNIVIYAYCRNGKMTEAKRILNEMKD 462
N F+ ++E LR ++E D L Y I + C++G+ EA + + +++
Sbjct: 624 NEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLRE 682
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/466 (21%), Positives = 190/466 (40%), Gaps = 32/466 (6%)
Query: 5 MKSQGLAPDLCTFNTLISCC-RAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
MK PD+ T+N ++ R + A ++ E+ P++ T+ L+D K
Sbjct: 153 MKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKG 212
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
R +A ++ M RG P+ VTYT LIS + G ++A +L +M PD +
Sbjct: 213 RTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHN 272
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
LL GF + A + G + +++LI + + +++ +
Sbjct: 273 ALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKK 332
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
PDI+ + L+ + G + + M G P+ +N +I A G ++
Sbjct: 333 NIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEG 392
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
R++ M E PD T+ ++ ++ R GL ++E++ +E+E C P+ T+++L+
Sbjct: 393 RSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDG 452
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
E ++ L ++ G+ ++ L+ N FD + E+
Sbjct: 453 LCKSGELKEARLLLHKMEVGR--PASLFLRLSHSGNRSFDTMVESGS------------- 497
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILR 423
+ K + L ++G + + YN L+ R + + +L
Sbjct: 498 ----------------ILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLN 541
Query: 424 EILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDV 469
+ KG+ PD ++YN +I R G+ EA ++ D P V
Sbjct: 542 VLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV 587
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 143/379 (37%), Gaps = 79/379 (20%)
Query: 227 FNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEME 286
F +I S D + + GV+ D + +++A A+ G+ E++ + M+
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 287 NGRCKPNEVTYSSLLH-----------AYANGKEFEKMNA---------LAEEIY----- 321
C+P+ TY+ +L A+A E K N L + +Y
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 322 ---------------SGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITT 366
S T+ +L+ L S D A F E + G D
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADD----ARKLFYEMQTSGNYPDSVA 270
Query: 367 LNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFR---------- 416
NA+L + + + + ++L+ + GF L L GY+SL+ R R +
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330
Query: 417 ----KSEMILREIL---------------------EKGIEPDLISYNIVIYAYCRNGKMT 451
K ++IL IL KGI PD YN VI A C G +
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLE 390
Query: 452 EAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
E + + EM + PD T+ + + N + EA + + K GC P T+N+++
Sbjct: 391 EGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALI 450
Query: 512 DWYCKLHLREEAYNFVHNL 530
D CK +EA +H +
Sbjct: 451 DGLCKSGELKEARLLLHKM 469
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 212/440 (48%), Gaps = 60/440 (13%)
Query: 36 LFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYV 95
+++E+ ++P++ T+N +++ K+ + +A +V++ M+ G P++V+Y +LI Y
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 96 R---DGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDEL--AMRVFEEMRTAGC 150
+ +G + +A + +MVE + P++ T+ L+ GF K D L +M+VF+EM
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGF--WKDDNLPGSMKVFKEMLDQDV 327
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
KPN+ ++N+LI + G +E + ++ + P+++T+N L+ F +N + E
Sbjct: 328 KPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALD 387
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
+F +K G VP +N LI AY + G D A+ + M G+ PD+ TYN ++A L
Sbjct: 388 MFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLC 447
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAV 330
R G E ++K+ ++ + + P+ VT+ L+ Y E K A+
Sbjct: 448 RNGNIEAAKKLFDQLTS-KGLPDLVTFHILMEGYCRKGESRKA---------------AM 491
Query: 331 LLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRK-KLVAKTNKILKF 389
LLK E K G+ T N ++ Y ++ L A TN +
Sbjct: 492 LLK--------------------EMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQM 531
Query: 390 MYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGK 449
E +++ YN L+ +S+ + M+L E+LEKG+ P+ I+Y IV
Sbjct: 532 EKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV--------- 582
Query: 450 MTEAKRILNEMKDPAPVPDV 469
EM D VPD+
Sbjct: 583 -------KEEMVDQGFVPDI 595
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 211/435 (48%), Gaps = 56/435 (12%)
Query: 4 DMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY--- 59
+M + + P++ TFN +I+ C+ G + +A ++ E++K+ G P++V+YN L+D Y
Sbjct: 213 EMIRRKIQPNVFTFNVVINALCKTGKM-NKARDVMEDMKVYGCSPNVVSYNTLIDGYCKL 271
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
G + + +A VLK+M P++ T+ LI + +D L ++++ +M+++ +KP+V
Sbjct: 272 GGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNV 331
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
+Y +L++G N K A+ + ++M +AG +PN+ T+NALI + M E +F
Sbjct: 332 ISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGS 391
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+K P +N L+ + + G + + +EM+R G VP+ T+N LI+ R G+
Sbjct: 392 VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN 451
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
+ A+ ++ ++ G+ PDL T++ ++ R G ++ +L EM KP +TY+
Sbjct: 452 IEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNI 510
Query: 300 LLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRG 359
++ Y + + ++ K+R
Sbjct: 511 VMKGYCKEGNLKAATNMRTQME----------------------------------KERR 536
Query: 360 IPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSE 419
+ ++ + N +L Y +K + N +L M E G +P N + Y E
Sbjct: 537 LRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGL---VP--NRITY-----------E 580
Query: 420 MILREILEKGIEPDL 434
++ E++++G PD+
Sbjct: 581 IVKEEMVDQGFVPDI 595
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 204/430 (47%), Gaps = 11/430 (2%)
Query: 50 VTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQ 109
+ + L+ Y + R + E K+ G+ S ++ L+ A +++ + + +
Sbjct: 154 IIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKE 213
Query: 110 MVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMY---GD 166
M+ + I+P+V+T+ +++ K A V E+M+ GC PN+ ++N LI Y G
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273
Query: 167 RGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG---VFKEMKRAGFVPE 223
G + V KE+ SP++ T+N L+ F + D + G VFKEM P
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWK---DDNLPGSMKVFKEMLDQDVKPN 330
Query: 224 RETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLS 283
++N+LI+ G +A ++ +M+ AGV P+L TYNA++ + + +++ +
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390
Query: 284 EMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFD 343
++ P Y+ L+ AY + + AL EE+ I L+ +
Sbjct: 391 SVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450
Query: 344 FLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYN 403
+ A+ F + +G+P D+ T + ++ Y RK K +LK M + G YN
Sbjct: 451 NIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYN 509
Query: 404 SLMYLHSRTRNFRKSEMILREI-LEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKD 462
+M + + N + + + ++ E+ + ++ SYN+++ Y + GK+ +A +LNEM +
Sbjct: 510 IVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLE 569
Query: 463 PAPVPDVVTY 472
VP+ +TY
Sbjct: 570 KGLVPNRITY 579
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 199/445 (44%), Gaps = 16/445 (3%)
Query: 89 SLISAYVRDGLLEE------ALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVF 142
S + +VR+G + A+ + + + I D+ L+ + N + EL F
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADM-----LVLAYANNSRFELGFEAF 176
Query: 143 EEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQN 202
+ G K + + L+ A++ V+KE+ + P++ T+N ++ +
Sbjct: 177 KRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKT 236
Query: 203 GLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS---FDQARAVYKRMLEAGVTPDL 259
G ++ V ++MK G P ++NTLI Y + G +A AV K M+E V+P+L
Sbjct: 237 GKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNL 296
Query: 260 STYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEE 319
+T+N ++ + S KV EM + KPN ++Y+SL++ NG + + ++ ++
Sbjct: 297 TTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDK 356
Query: 320 IYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKL 379
+ S + + + L+ K D L EA F K +G N ++ Y +
Sbjct: 357 MVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGK 416
Query: 380 VAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNI 439
+ + + M G + YN L+ R N ++ + ++ KG+ PDL++++I
Sbjct: 417 IDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHI 475
Query: 440 VIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQ- 498
++ YCR G+ +A +L EM P +TYN + Y A + M K+
Sbjct: 476 LMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKER 535
Query: 499 GCKPDQNTYNSIVDWYCKLHLREEA 523
+ + +YN ++ Y + E+A
Sbjct: 536 RLRMNVASYNVLLQGYSQKGKLEDA 560
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 154/298 (51%), Gaps = 2/298 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +M ++P+L TFN LI ++++F+E+ ++P++++YN+L++
Sbjct: 283 VLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLC 342
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ EA+ + +M S G P+++TY +LI+ + ++ +L+EAL++ + + P
Sbjct: 343 NGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTR 402
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
Y L+ + K + + EEM G P++ T+N LI G K+F ++
Sbjct: 403 MYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL 462
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ + PD+VT++ L+ + + G + + + KEM + G P T+N ++ Y + G+
Sbjct: 463 TS-KGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNL 521
Query: 241 DQARAVYKRM-LEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTY 297
A + +M E + ++++YN +L ++ G E + +L+EM PN +TY
Sbjct: 522 KAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 92/435 (21%), Positives = 181/435 (41%), Gaps = 46/435 (10%)
Query: 105 ELKNQMVEKHIKPDVYT--YTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIK 162
EL Q++ + PD+ Y+ L+ + EL ++ + A I +F +
Sbjct: 69 ELFRQLISSELDPDLCLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSF---LD 125
Query: 163 MYGDRGMFAEMGKVFKEIKACQ--CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGF 220
+ G ++ +F I C C I+ + L+ + N S F+ KR+G+
Sbjct: 126 GFVRNGSDHQVHSIFHAISMCDNVCVNSIIA-DMLVLAYANN---SRFELGFEAFKRSGY 181
Query: 221 VPERET---FNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQ 277
+ + L+ A + VYK M+ + P++ T+N V+ AL + G +
Sbjct: 182 YGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241
Query: 278 SEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVL 337
+ V+ +M+ C PN V+Y++L+ Y K+ +GK+ +LK +V
Sbjct: 242 ARDVMEDMKVYGCSPNVVSYNTLIDGYC------KLGG------NGKMYKADAVLKEMV- 288
Query: 338 VNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTL 397
+ + ++TT N ++ + + + + K+ K M +
Sbjct: 289 -------------------ENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 398 SLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRIL 457
++ YNSL+ ++ + +++ G++P+LI+YN +I +C+N + EA +
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Query: 458 NEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKL 517
+K VP YN + Y + + + M ++G PD TYN ++ C+
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449
Query: 518 HLREEAYNFVHNLSS 532
E A L+S
Sbjct: 450 GNIEAAKKLFDQLTS 464
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 129/558 (23%), Positives = 259/558 (46%), Gaps = 32/558 (5%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L MK Q L ++N+++ R ++ ++++EIK + TY+ ++D
Sbjct: 146 ILKKMKDQNLNVSTQSYNSVLYHFRET---DKMWDVYKEIK----DKNEHTYSTVVDGLC 198
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ ++ ++A+ L+ E + PS+V++ S++S Y + G ++ A +++ + P VY
Sbjct: 199 RQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVY 258
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
++ L++G A+ + +M G +P+ T+N L K + GM + +V +++
Sbjct: 259 SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDM 318
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGV--FKEMKRAGF-----VPERETFNTLISA 233
SPD++T+ LL GQ L + G+ K+M GF +P + ++S
Sbjct: 319 LDKGLSPDVITYTILLC--GQCQLGNIDMGLVLLKDMLSRGFELNSIIP----CSVMLSG 372
Query: 234 YSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPN 293
+ G D+A +++ +M G++PDL Y+ V+ L + G ++ + + EM + R PN
Sbjct: 373 LCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPN 432
Query: 294 EVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFL 353
T+ +LL + +L + + S T VL ++ +K + EA F
Sbjct: 433 SRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 492
Query: 354 EFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTR 413
+ GI + T N+++ Y + + +A+ KIL + G S+ Y +LM ++
Sbjct: 493 VVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG 552
Query: 414 NFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNE------------MK 461
N + + + RE+ +GI P ++Y+++ CR K +L E M+
Sbjct: 553 NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDME 612
Query: 462 DPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLRE 521
PD +TYNT + A ++ M + TYN ++D C
Sbjct: 613 SEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIR 672
Query: 522 EAYNFVHNLSSLDLHVSE 539
+A +F+++L ++ +S+
Sbjct: 673 KADSFIYSLQEQNVSLSK 690
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 120/499 (24%), Positives = 211/499 (42%), Gaps = 31/499 (6%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
DM G+ PD T+N L + A E+ ++ GL PD++TY LL +
Sbjct: 282 DMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLG 341
Query: 64 RPKEAMEVLKQMESRGFP-PSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
+ +LK M SRGF SI+ + ++S + G ++EAL L NQM + PD+ Y
Sbjct: 342 NIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAY 401
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
+ ++ G K ++A+ +++EM PN T AL+ +GM E + + +
Sbjct: 402 SIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLIS 461
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
+ DIV +N ++ + ++G E +FK + G P TFN+LI Y + + +
Sbjct: 462 SGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAE 521
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
AR + + G+ P + +Y ++ A A G + +++ EM+ P VTYS +
Sbjct: 522 ARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFK 581
Query: 303 AYANGKEFEKMN-ALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIP 361
G + E N L E I+ + + + + GIP
Sbjct: 582 GLCRGWKHENCNHVLRERIFE------------------------KCKQGLRDMESEGIP 617
Query: 362 HDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMI 421
D T N ++ R K ++ L+ M S YN L+ RK++
Sbjct: 618 PDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSF 677
Query: 422 LREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTY----NTFVA 477
+ + E+ + +Y +I A+C G A ++ +++ + Y N
Sbjct: 678 IYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
Query: 478 TYAANSMFGEAIGVVQCMI 496
+ N G++ GV C+I
Sbjct: 738 RHLMNCFPGQSNGVC-CLI 755
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/517 (22%), Positives = 235/517 (45%), Gaps = 34/517 (6%)
Query: 9 GLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKE 67
GL P + + N LI+ C GS+ EALEL ++ G+ PD VTYN L +
Sbjct: 252 GLVPSVYSHNILINGLCLVGSI-AEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISG 310
Query: 68 AMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPD-VYTYTTLL 126
A EV++ M +G P ++TYT L+ + G ++ L L M+ + + + + + +L
Sbjct: 311 AWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVML 370
Query: 127 SGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCS 186
SG + + A+ +F +M+ G P++ ++ +I G F ++ E+ +
Sbjct: 371 SGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRIL 430
Query: 187 PDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAV 246
P+ T LL Q G+ E + + +G + +N +I Y++ G ++A +
Sbjct: 431 PNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALEL 490
Query: 247 YKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYAN 306
+K ++E G+TP ++T+N+++ + ++ K+L ++ P+ V+Y++L+ AYAN
Sbjct: 491 FKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYAN 550
Query: 307 GKEFEKMNALAEEIYSGKI----TTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPH 362
+ ++ L E+ + I T++V+ K L RG H
Sbjct: 551 CGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC---------------------RGWKH 589
Query: 363 DITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMIL 422
+ N +L R+++ K + L+ M G YN+++ R ++ + + L
Sbjct: 590 E--NCNHVL----RERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFL 643
Query: 423 REILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAAN 482
+ + ++ +YNI+I + C G + +A + +++ Y T + +
Sbjct: 644 EIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVK 703
Query: 483 SMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHL 519
A+ + ++ +G Y+++++ C+ HL
Sbjct: 704 GDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHL 740
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/543 (22%), Positives = 232/543 (42%), Gaps = 43/543 (7%)
Query: 50 VTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAY--------------- 94
+ ++ LL + + R +++ +LK+M+ + S +Y S++ +
Sbjct: 125 LVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKD 184
Query: 95 --------VRDGL-----LEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRV 141
V DGL LE+A+ K I P V ++ +++SG+ ++A
Sbjct: 185 KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSF 244
Query: 142 FEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQ 201
F + G P++ + N LI G AE ++ ++ PD VT+N L F
Sbjct: 245 FCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL 304
Query: 202 NGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPD-LS 260
G+ S V ++M G P+ T+ L+ + G+ D + K ML G + +
Sbjct: 305 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 364
Query: 261 TYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEI 320
+ +L+ L + G +++ + ++M+ P+ V YS ++H +F+ L +E+
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Query: 321 YSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLV 380
+I ++ L+L + L EA G DI N ++ Y + +
Sbjct: 425 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484
Query: 381 AKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIV 440
+ ++ K + E+G T S+ +NSL+Y + +T+N ++ IL I G+ P ++SY +
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 441 IYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYA-------ANSMFGEAIGVVQ 493
+ AY G + EMK P VTY+ N + E I +
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERI-FEK 603
Query: 494 C------MIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEKGRLLE 547
C M +G PDQ TYN+I+ + C++ A+ F+ + S +L S L++
Sbjct: 604 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 663
Query: 548 RIA 550
+
Sbjct: 664 SLC 666
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 102/248 (41%), Gaps = 41/248 (16%)
Query: 319 EIYSGKITTHAVLLKTLVLVNSK--------FDFLAEAEHAFLEFKKRGIPHDITTLNAM 370
+IY+ + ++ + LL + VL + + L + E F +++ G+ D+ +
Sbjct: 76 DIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGLVWDM-----L 130
Query: 371 LSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYL-------------------HS- 410
L L R ++V + ILK M + +S YNS++Y H+
Sbjct: 131 LFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTY 190
Query: 411 --------RTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKD 462
R + + + LR K I P ++S+N ++ YC+ G + AK +
Sbjct: 191 STVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLK 250
Query: 463 PAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREE 522
VP V ++N + EA+ + M K G +PD TYN + + L +
Sbjct: 251 CGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISG 310
Query: 523 AYNFVHNL 530
A+ + ++
Sbjct: 311 AWEVIRDM 318
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 129/558 (23%), Positives = 259/558 (46%), Gaps = 32/558 (5%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L MK Q L ++N+++ R ++ ++++EIK + TY+ ++D
Sbjct: 146 ILKKMKDQNLNVSTQSYNSVLYHFRET---DKMWDVYKEIK----DKNEHTYSTVVDGLC 198
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ ++ ++A+ L+ E + PS+V++ S++S Y + G ++ A +++ + P VY
Sbjct: 199 RQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVY 258
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
++ L++G A+ + +M G +P+ T+N L K + GM + +V +++
Sbjct: 259 SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDM 318
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGV--FKEMKRAGF-----VPERETFNTLISA 233
SPD++T+ LL GQ L + G+ K+M GF +P + ++S
Sbjct: 319 LDKGLSPDVITYTILLC--GQCQLGNIDMGLVLLKDMLSRGFELNSIIP----CSVMLSG 372
Query: 234 YSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPN 293
+ G D+A +++ +M G++PDL Y+ V+ L + G ++ + + EM + R PN
Sbjct: 373 LCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPN 432
Query: 294 EVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFL 353
T+ +LL + +L + + S T VL ++ +K + EA F
Sbjct: 433 SRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 492
Query: 354 EFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTR 413
+ GI + T N+++ Y + + +A+ KIL + G S+ Y +LM ++
Sbjct: 493 VVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG 552
Query: 414 NFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNE------------MK 461
N + + + RE+ +GI P ++Y+++ CR K +L E M+
Sbjct: 553 NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDME 612
Query: 462 DPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLRE 521
PD +TYNT + A ++ M + TYN ++D C
Sbjct: 613 SEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIR 672
Query: 522 EAYNFVHNLSSLDLHVSE 539
+A +F+++L ++ +S+
Sbjct: 673 KADSFIYSLQEQNVSLSK 690
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 120/499 (24%), Positives = 211/499 (42%), Gaps = 31/499 (6%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
DM G+ PD T+N L + A E+ ++ GL PD++TY LL +
Sbjct: 282 DMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLG 341
Query: 64 RPKEAMEVLKQMESRGFP-PSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
+ +LK M SRGF SI+ + ++S + G ++EAL L NQM + PD+ Y
Sbjct: 342 NIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAY 401
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
+ ++ G K ++A+ +++EM PN T AL+ +GM E + + +
Sbjct: 402 SIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLIS 461
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
+ DIV +N ++ + ++G E +FK + G P TFN+LI Y + + +
Sbjct: 462 SGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAE 521
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
AR + + G+ P + +Y ++ A A G + +++ EM+ P VTYS +
Sbjct: 522 ARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFK 581
Query: 303 AYANGKEFEKMN-ALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIP 361
G + E N L E I+ + + + + GIP
Sbjct: 582 GLCRGWKHENCNHVLRERIFE------------------------KCKQGLRDMESEGIP 617
Query: 362 HDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMI 421
D T N ++ R K ++ L+ M S YN L+ RK++
Sbjct: 618 PDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSF 677
Query: 422 LREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTY----NTFVA 477
+ + E+ + +Y +I A+C G A ++ +++ + Y N
Sbjct: 678 IYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
Query: 478 TYAANSMFGEAIGVVQCMI 496
+ N G++ GV C+I
Sbjct: 738 RHLMNCFPGQSNGVC-CLI 755
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/517 (22%), Positives = 235/517 (45%), Gaps = 34/517 (6%)
Query: 9 GLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKE 67
GL P + + N LI+ C GS+ EALEL ++ G+ PD VTYN L +
Sbjct: 252 GLVPSVYSHNILINGLCLVGSI-AEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISG 310
Query: 68 AMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPD-VYTYTTLL 126
A EV++ M +G P ++TYT L+ + G ++ L L M+ + + + + + +L
Sbjct: 311 AWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVML 370
Query: 127 SGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCS 186
SG + + A+ +F +M+ G P++ ++ +I G F ++ E+ +
Sbjct: 371 SGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRIL 430
Query: 187 PDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAV 246
P+ T LL Q G+ E + + +G + +N +I Y++ G ++A +
Sbjct: 431 PNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALEL 490
Query: 247 YKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYAN 306
+K ++E G+TP ++T+N+++ + ++ K+L ++ P+ V+Y++L+ AYAN
Sbjct: 491 FKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYAN 550
Query: 307 GKEFEKMNALAEEIYSGKI----TTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPH 362
+ ++ L E+ + I T++V+ K L RG H
Sbjct: 551 CGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC---------------------RGWKH 589
Query: 363 DITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMIL 422
+ N +L R+++ K + L+ M G YN+++ R ++ + + L
Sbjct: 590 E--NCNHVL----RERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFL 643
Query: 423 REILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAAN 482
+ + ++ +YNI+I + C G + +A + +++ Y T + +
Sbjct: 644 EIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVK 703
Query: 483 SMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHL 519
A+ + ++ +G Y+++++ C+ HL
Sbjct: 704 GDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHL 740
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 124/543 (22%), Positives = 232/543 (42%), Gaps = 43/543 (7%)
Query: 50 VTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAY--------------- 94
+ ++ LL + + R +++ +LK+M+ + S +Y S++ +
Sbjct: 125 LVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKD 184
Query: 95 --------VRDGL-----LEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRV 141
V DGL LE+A+ K I P V ++ +++SG+ ++A
Sbjct: 185 KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSF 244
Query: 142 FEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQ 201
F + G P++ + N LI G AE ++ ++ PD VT+N L F
Sbjct: 245 FCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL 304
Query: 202 NGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPD-LS 260
G+ S V ++M G P+ T+ L+ + G+ D + K ML G + +
Sbjct: 305 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 364
Query: 261 TYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEI 320
+ +L+ L + G +++ + ++M+ P+ V YS ++H +F+ L +E+
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Query: 321 YSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLV 380
+I ++ L+L + L EA G DI N ++ Y + +
Sbjct: 425 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484
Query: 381 AKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIV 440
+ ++ K + E+G T S+ +NSL+Y + +T+N ++ IL I G+ P ++SY +
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 441 IYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYA-------ANSMFGEAIGVVQ 493
+ AY G + EMK P VTY+ N + E I +
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERI-FEK 603
Query: 494 C------MIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEKGRLLE 547
C M +G PDQ TYN+I+ + C++ A+ F+ + S +L S L++
Sbjct: 604 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 663
Query: 548 RIA 550
+
Sbjct: 664 SLC 666
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 102/248 (41%), Gaps = 41/248 (16%)
Query: 319 EIYSGKITTHAVLLKTLVLVNSK--------FDFLAEAEHAFLEFKKRGIPHDITTLNAM 370
+IY+ + ++ + LL + VL + + L + E F +++ G+ D+ +
Sbjct: 76 DIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGLVWDM-----L 130
Query: 371 LSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYL-------------------HS- 410
L L R ++V + ILK M + +S YNS++Y H+
Sbjct: 131 LFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTY 190
Query: 411 --------RTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKD 462
R + + + LR K I P ++S+N ++ YC+ G + AK +
Sbjct: 191 STVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLK 250
Query: 463 PAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREE 522
VP V ++N + EA+ + M K G +PD TYN + + L +
Sbjct: 251 CGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISG 310
Query: 523 AYNFVHNL 530
A+ + ++
Sbjct: 311 AWEVIRDM 318
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 187/369 (50%), Gaps = 2/369 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L M G PD T +L++ CR + +A+ L +++ G +PD+V YNA++D
Sbjct: 142 ILGKMLKLGYEPDRVTIGSLVNGFCRRNRV-SDAVSLVDKMVEIGYKPDIVAYNAIIDSL 200
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
K++R +A + K++E +G P++VTYT+L++ +A L + M++K I P+V
Sbjct: 201 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV 260
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TY+ LL FV K A +FEEM P+I T+++LI E ++F
Sbjct: 261 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 320
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+ + C D+V++NTL+ F + + +F+EM + G V T+NTLI + + G
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
D+A+ + +M G++PD+ TYN +L L G E++ + +M+ + VTY++
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 300 LLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRG 359
++ + E+ +L + + V T++ L E E + + K+ G
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Query: 360 IPHDITTLN 368
+ + TL+
Sbjct: 501 LMKNDCTLS 509
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 209/458 (45%), Gaps = 35/458 (7%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
DM P + FN L+S Y+ + L +++++ G+R D+ T+N +++ +
Sbjct: 75 DMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCF 134
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ A+ +L +M G+ P VT SL++ + R + +A+ L ++MVE KPD+ Y
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 194
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
++ K+ A F+E+ G +PN+ T+ AL+ + +++ ++ ++
Sbjct: 195 AIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK 254
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
+ +P+++T++ LL F +NG E +F+EM R P+ T+++LI+ D+A
Sbjct: 255 KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA 314
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
++ M+ G D+ +YN ++ + E K+ EM N VTY++L+
Sbjct: 315 NQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQG 374
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
+ + +K A+E + S+ DF GI D
Sbjct: 375 FFQAGDVDK----AQEFF------------------SQMDFF-------------GISPD 399
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILR 423
I T N +L + K I + M + L + Y +++ +T ++ +
Sbjct: 400 IWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFC 459
Query: 424 EILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMK 461
+ KG++PD+++Y ++ C G + E + + +MK
Sbjct: 460 SLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 189/391 (48%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M+ G+ DL TFN +I+C AL + ++ G PD VT +L++ + + R
Sbjct: 111 MEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 170
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+A+ ++ +M G+ P IV Y ++I + + + +A + ++ K I+P+V TYT
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 230
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
L++G N+ + A R+ +M PN+ T++AL+ + G E ++F+E+
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 290
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
PDIVT+++L+ + E + +F M G + + ++NTLI+ + + +
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
+++ M + G+ + TYN ++ + G +++++ S+M+ P+ TY+ LL
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410
Query: 305 ANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDI 364
+ E EK + E++ ++ V T++ K + EA F +G+ DI
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 470
Query: 365 TTLNAMLSLYGRKKLVAKTNKILKFMYESGF 395
T M+S K L+ + + M + G
Sbjct: 471 VTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 200/433 (46%), Gaps = 8/433 (1%)
Query: 95 VRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNI 154
+RD L +A++L + MV+ P + + LLS V KK ++ + + ++M G + ++
Sbjct: 61 LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120
Query: 155 CTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKE 214
TFN +I + + + ++ PD VT +L+ F + S+ + +
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 215 MKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGL 274
M G+ P+ +N +I + + + A +K + G+ P++ TY A++ L
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 275 WEQSEKVLSEMENGRCKPNEVTYSSLLHAYA-NGKEFEKMNALAEEI---YSGKITTHAV 330
W + ++LS+M + PN +TYS+LL A+ NGK E E + I T++
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 331 LLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFM 390
L+ L L D + EA F +G D+ + N +++ + + K V K+ + M
Sbjct: 301 LINGLCL----HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 356
Query: 391 YESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKM 450
+ G + YN+L+ + + K++ ++ GI PD+ +YNI++ C NG++
Sbjct: 357 SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGEL 416
Query: 451 TEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSI 510
+A I +M+ D+VTY T + EA + + +G KPD TY ++
Sbjct: 417 EKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTM 476
Query: 511 VDWYCKLHLREEA 523
+ C L E
Sbjct: 477 MSGLCTKGLLHEV 489
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 200/434 (46%), Gaps = 2/434 (0%)
Query: 67 EAMEVLKQM-ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTL 125
+A+++ M +SR FP SIV + L+SA V+ + + L +M I+ D+YT+ +
Sbjct: 68 DAIDLFSDMVKSRPFP-SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 126
Query: 126 LSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQC 185
++ F + LA+ + +M G +P+ T +L+ + R ++ + ++
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
PDIV +N ++ + ++ FKE++R G P T+ L++ + A
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA 305
+ M++ +TP++ TY+A+L A + G +++++ EM P+ VTYSSL++
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 306 NGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDIT 365
++ N + + + S V TL+ K + + F E +RG+ +
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 366 TLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREI 425
T N ++ + + V K + M G + + YN L+ K+ +I ++
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Query: 426 LEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMF 485
++ ++ D+++Y VI C+ GK+ EA + + PD+VTY T ++ +
Sbjct: 427 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLL 486
Query: 486 GEAIGVVQCMIKQG 499
E + M ++G
Sbjct: 487 HEVEALYTKMKQEG 500
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 143/328 (43%), Gaps = 49/328 (14%)
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
+F +M ++ P FN L+SA + +D ++ K+M G+ DL T+N V+
Sbjct: 72 LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC 131
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEI----YSGKIT 326
+ +L +M +P+ VT SL++ + +L +++ Y I
Sbjct: 132 CCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIV 191
Query: 327 THAVLLKTLV---LVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKT 383
+ ++ +L VN FDF F E +++GI ++ T
Sbjct: 192 AYNAIIDSLCKTKRVNDAFDF-------FKEIERKGIRPNVVT----------------- 227
Query: 384 NKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYA 443
Y +L+ + + + +L ++++K I P++I+Y+ ++ A
Sbjct: 228 ------------------YTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 269
Query: 444 YCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPD 503
+ +NGK+ EAK + EM + PD+VTY++ + + EA + M+ +GC D
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 329
Query: 504 QNTYNSIVDWYCKLHLREEAYNFVHNLS 531
+YN++++ +CK E+ +S
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMS 357
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 126/535 (23%), Positives = 231/535 (43%), Gaps = 74/535 (13%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
M+MDM++QGL P T N ++ L E A +F+E+ + G+ PD +Y ++
Sbjct: 169 MVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCF 228
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ + +EA L M RGF P T T +++A +GL+ A+ +M++ KP++
Sbjct: 229 RDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLI 288
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVF-KE 179
+T+L+ G + A + EEM G KPN+ T ALI RG + ++F K
Sbjct: 289 NFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKL 348
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+++ P++ T+ +++ + + + +F MK G P T+ TLI+ + + GS
Sbjct: 349 VRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGS 408
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
F +A + M + G P++ TYNA + +L + ++ ++L++ + + + VTY+
Sbjct: 409 FGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTI 468
Query: 300 LLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRG 359
L+ + +N F F K G
Sbjct: 469 LIQEQCKQND----------------------------INQALAF-------FCRMNKTG 493
Query: 360 IPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSE 419
D+ N +++ + R+K ++SE
Sbjct: 494 FEADMRLNNILIAAFCRQK-----------------------------------KMKESE 518
Query: 420 MILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATY 479
+ + ++ G+ P +Y +I YC+ G + A + + MK VPD TY + ++
Sbjct: 519 RLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGL 578
Query: 480 AANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLD 534
SM EA + + MI +G P + T ++ YCK R ++ N + L LD
Sbjct: 579 CKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCK---RNDSANAMILLEPLD 630
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/472 (22%), Positives = 193/472 (40%), Gaps = 38/472 (8%)
Query: 54 ALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEK 113
+L + + R EA+ ++ M+++G PS +T ++ V GL+E A + ++M +
Sbjct: 152 CMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR 211
Query: 114 HIKPDVYTYTTLLSG-FVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAE 172
+ PD +Y ++ G F + K E DR +
Sbjct: 212 GVVPDSSSYKLMVIGCFRDGKIQE----------------------------ADRWLTGM 243
Query: 173 MGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLIS 232
+ + F PD T +L +NGL + F++M GF P F +LI
Sbjct: 244 IQRGF--------IPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLID 295
Query: 233 AYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKV-LSEMENGRCK 291
+ GS QA + + M+ G P++ T+ A++ L + G E++ ++ L + + K
Sbjct: 296 GLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYK 355
Query: 292 PNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHA 351
PN TY+S++ Y + + L + + + TL+ + K A
Sbjct: 356 PNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYEL 415
Query: 352 FLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSR 411
G +I T NA + +K + ++L + G Y L+ +
Sbjct: 416 MNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCK 475
Query: 412 TRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVT 471
+ ++ + + G E D+ NI+I A+CR KM E++R+ + +P T
Sbjct: 476 QNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKET 535
Query: 472 YNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEA 523
Y + ++ Y A+ M + GC PD TY S++ CK + +EA
Sbjct: 536 YTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEA 587
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/411 (20%), Positives = 181/411 (44%), Gaps = 9/411 (2%)
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
+L F + A+ + +M+ G P+ T N ++++ + G+ VF E+
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
PD ++ ++ ++G E M + GF+P+ T +++A G ++A
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
+++M++ G P+L + +++ L + G +Q+ ++L EM KPN T+++L+
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 305 ANGKEFEK-----MNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRG 359
EK + + + Y + T+ ++ K D L AE F K++G
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYC----KEDKLNRAEMLFSRMKEQG 388
Query: 360 IPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSE 419
+ ++ T +++ + + + +++ M + GF ++ YN+ + + ++
Sbjct: 389 LFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAY 448
Query: 420 MILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATY 479
+L + G+E D ++Y I+I C+ + +A M D+ N +A +
Sbjct: 449 ELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAF 508
Query: 480 AANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
E+ + Q ++ G P + TY S++ YCK + A + HN+
Sbjct: 509 CRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNM 559
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 166/387 (42%), Gaps = 9/387 (2%)
Query: 159 ALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRA 218
+++ + + G E + +++ +P +T N +L + + GL VF EM
Sbjct: 152 CMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR 211
Query: 219 GFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQS 278
G VP+ ++ ++ R G +A M++ G PD +T +L AL GL ++
Sbjct: 212 GVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRA 271
Query: 279 EKVLSEMENGRCKPNEVTYSSLLHAYANG----KEFEKMNALAEEIYSGKITTHAVLLKT 334
+M + KPN + ++SL+ + FE + + + + TH L+
Sbjct: 272 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 331
Query: 335 LVLVNSKFDFLAEAEHAFLEFKKRGI-PHDITTLNAMLSLYGRKKLVAKTNKILKFMYES 393
L K + +A FL+ + ++ T +M+ Y ++ + + + M E
Sbjct: 332 LC----KRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 387
Query: 394 GFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEA 453
G ++ Y +L+ H + +F ++ ++ + ++G P++ +YN I + C+ + EA
Sbjct: 388 GLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEA 447
Query: 454 KRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDW 513
+LN+ D VTY + + +A+ M K G + D N ++
Sbjct: 448 YELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAA 507
Query: 514 YCKLHLREEAYNFVHNLSSLDLHVSEE 540
+C+ +E+ + SL L ++E
Sbjct: 508 FCRQKKMKESERLFQLVVSLGLIPTKE 534
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 137/314 (43%), Gaps = 5/314 (1%)
Query: 225 ETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSE 284
E ++ +S G ++A + M G+TP T N VL GL E +E V E
Sbjct: 148 EVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDE 207
Query: 285 MENGRCKPNEVTYSSL-LHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVN-SKF 342
M P+ +Y + + + +GK E L I G I +A TL+L +
Sbjct: 208 MSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATC--TLILTALCEN 265
Query: 343 DFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGY 402
+ A F + G ++ +++ +K + + ++L+ M +G+ ++ +
Sbjct: 266 GLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTH 325
Query: 403 NSLM-YLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMK 461
+L+ L R + + L+ + +P++ +Y +I YC+ K+ A+ + + MK
Sbjct: 326 TALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMK 385
Query: 462 DPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLRE 521
+ P+V TY T + + FG A ++ M +G P+ TYN+ +D CK
Sbjct: 386 EQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAP 445
Query: 522 EAYNFVHNLSSLDL 535
EAY ++ S L
Sbjct: 446 EAYELLNKAFSCGL 459
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/235 (17%), Positives = 100/235 (42%), Gaps = 1/235 (0%)
Query: 283 SEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKF 342
S + NG + +L ++ + + ++ + +T ++ + ++ + +
Sbjct: 136 SLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVEL 195
Query: 343 DFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGY 402
+ AE+ F E RG+ D ++ M+ R + + ++ L M + GF
Sbjct: 196 GLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATC 255
Query: 403 NSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKD 462
++ ++ R++++ G +P+LI++ +I C+ G + +A +L EM
Sbjct: 256 TLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR 315
Query: 463 PAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGC-KPDQNTYNSIVDWYCK 516
P+V T+ + +A + +++ KP+ +TY S++ YCK
Sbjct: 316 NGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCK 370
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 219/447 (48%), Gaps = 2/447 (0%)
Query: 31 EEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSL 90
++A+ LF + + P ++ ++ LL K + + ++ME G ++ TY L
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 91 ISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
I+ + R L AL L +M++ +PD+ T +LL+GF + + A+ + ++M G
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
KP+ TF LI +E + + C PD+VT+ ++ + G
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
+ +M+ A ++T+I + + D A ++ M GV P++ TY+++++ L
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAV 330
G W + ++LS+M + PN VT+S+L+ A+ + K L EE+ I +
Sbjct: 300 NYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIF 359
Query: 331 LLKTLVLVNSKFDFLAEAEHAF-LEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKF 389
+L+ D L EA+ L +K +P ++ T N +++ + + K V K ++ +
Sbjct: 360 TYSSLINGFCMLDRLGEAKQMLELMIRKDCLP-NVVTYNTLINGFCKAKRVDKGMELFRE 418
Query: 390 MYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGK 449
M + G + Y +L++ + R+ ++M+ ++++ G+ P++++YNI++ C+NGK
Sbjct: 419 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 478
Query: 450 MTEAKRILNEMKDPAPVPDVVTYNTFV 476
+ +A + ++ PD+ TYN +
Sbjct: 479 LAKAMVVFEYLQRSTMEPDIYTYNIMI 505
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 209/438 (47%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV 71
P + F+ L+S + ++ + E++++ G+ ++ TYN L++ + + R A+ +
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 72 LKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVN 131
L +M G+ P IVT SL++ + + +A+ L +QMVE KPD T+TTL+ G
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195
Query: 132 AKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVT 191
K A+ + + M GC+P++ T+ A++ RG + +++A + ++V
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 192 WNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRML 251
++T++ + + + +F EM+ G P T+++LIS G + A + M+
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 252 EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE 311
E + P+L T++A++ A + G ++EK+ EM PN TYSSL++ +
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 312 KMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAML 371
+ + E + + V TL+ K + + F E +RG+ + T ++
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Query: 372 SLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIE 431
+ + + + K M G ++ YN L+ + K+ ++ + +E
Sbjct: 436 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 495
Query: 432 PDLISYNIVIYAYCRNGK 449
PD+ +YNI+I C+ GK
Sbjct: 496 PDIYTYNIMIEGMCKAGK 513
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 188/371 (50%), Gaps = 8/371 (2%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M G PD+ T N+L++ G+ +A+ L +++ G +PD VT+ L+ +
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
EA+ ++ +M RG P +VTY ++++ + G + AL L N+M I+ +V Y+T
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
++ + ++ A+ +F EM G +PN+ T+++LI + G +++ ++ ++ +
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
+P++VT++ L+ F + G + +++EM + P T+++LI+ + +A+
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK 378
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
+ + M+ P++ TYN ++ + ++ ++ EM N VTY++L+H +
Sbjct: 379 QMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF 438
Query: 305 ANGKEFEKMNALAEEIYS----GKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI 360
++ + + +++ S I T+ +LL L N K LA+A F ++ +
Sbjct: 439 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC-KNGK---LAKAMVVFEYLQRSTM 494
Query: 361 PHDITTLNAML 371
DI T N M+
Sbjct: 495 EPDIYTYNIMI 505
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 200/465 (43%), Gaps = 35/465 (7%)
Query: 87 YTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMR 146
Y ++ + D L++A+ L M + P + ++ LLS K +L + E+M
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 147 TAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDS 206
G N+ T+N LI + + + ++ PDIVT N+LL F S
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165
Query: 207 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVL 266
+ + +M G+ P+ TF TLI +A A+ RM++ G PDL TY AV+
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 267 AALARGG-------LWEQSE----------------------------KVLSEMENGRCK 291
L + G L + E + +EMEN +
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 292 PNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHA 351
PN +TYSSL+ N + + L ++ KI + V L+ K L +AE
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345
Query: 352 FLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSR 411
+ E KR I +I T +++++ + + + ++L+ M ++ YN+L+ +
Sbjct: 346 YEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCK 405
Query: 412 TRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVT 471
+ K + RE+ ++G+ + ++Y +I+ + + A+ + +M P+++T
Sbjct: 406 AKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 465
Query: 472 YNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
YN + N +A+ V + + + +PD TYN +++ CK
Sbjct: 466 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 151/281 (53%), Gaps = 10/281 (3%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L M++ + ++ ++T+I ++AL LF E++ G+RP+++TY++L+
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
R +A +L M R P++VT+++LI A+V+ G L +A +L +M+++ I P+++
Sbjct: 300 NYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIF 359
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYG-----DRGMFAEMGK 175
TY++L++GF + A ++ E M C PN+ T+N LI + D+GM +
Sbjct: 360 TYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGM-----E 414
Query: 176 VFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYS 235
+F+E+ + VT+ TL+ F Q VFK+M G P T+N L+
Sbjct: 415 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 474
Query: 236 RCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWE 276
+ G +A V++ + + + PD+ TYN ++ + + G W+
Sbjct: 475 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 86/159 (54%), Gaps = 6/159 (3%)
Query: 380 VAKTNK---ILKF---MYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPD 433
+AK NK ++ F M G + +L YN L+ R + +L ++++ G EPD
Sbjct: 88 IAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPD 147
Query: 434 LISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQ 493
+++ N ++ +C ++++A ++++M + PD VT+ T + ++ EA+ ++
Sbjct: 148 IVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALID 207
Query: 494 CMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSS 532
M+++GC+PD TY ++V+ CK + A N ++ + +
Sbjct: 208 RMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEA 246
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 132/518 (25%), Positives = 237/518 (45%), Gaps = 40/518 (7%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +M+ L PD+ ++NT+I G E+ALEL E+K +G +VT+ L+D +
Sbjct: 164 LLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFC 223
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K+ + EAM LK+M+ G +V YTSLI + G L+ L ++++E+ P
Sbjct: 224 KAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI 283
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY TL+ GF + + A +FE M G +PN+ T+ LI G E ++ +
Sbjct: 284 TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
P+ VT+N ++ ++GL ++ + + MK+ P+ T+N L+ G
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403
Query: 241 DQARAVYKRMLEAG--VTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYS 298
D+A + ML+ PD+ +YNA++ +G CK N
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALI--------------------HGLCKENR---- 439
Query: 299 SLLHAYANGKEFEKMNALAEEIYSG-KITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKK 357
LH + + + L E++ +G ++TT+ +L TL K + +A + +
Sbjct: 440 --LH-----QALDIYDLLVEKLGAGDRVTTNILLNSTL-----KAGDVNKAMELWKQISD 487
Query: 358 RGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRK 417
I + T AM+ + + ++ +L M S S+ YN L+ + + +
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQ 547
Query: 418 SEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVA 477
+ + E+ PD++S+NI+I + G + A+ +L M PD+ TY+ +
Sbjct: 548 AWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Query: 478 TYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYC 515
+ EAI M+ G +PD + +S++ YC
Sbjct: 608 RFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK-YC 644
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/521 (22%), Positives = 232/521 (44%), Gaps = 39/521 (7%)
Query: 48 DMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELK 107
+ V+ + LL+ Y + R+ A VL M RGF ++ + L+ R+ +A+ L
Sbjct: 106 NFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLL 165
Query: 108 NQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDR 167
+M + PDV++Y T++ GF K+ E A+ + EM+ +GC ++ T+ LI +
Sbjct: 166 REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225
Query: 168 GMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETF 227
G E KE+K D+V + +L+ F G +F E+ G P T+
Sbjct: 226 GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285
Query: 228 NTLISAYSRCGSFDQARAVYKRMLEAGVTPDL---------------------------- 259
NTLI + + G +A +++ M+E GV P++
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE 345
Query: 260 -------STYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEK 312
TYN ++ L + GL + +++ M+ R +P+ +TY+ LL + ++
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDE 405
Query: 313 MNALAEEIYSGKITTHAVLLKTLVLVNS--KFDFLAEAEHAF-LEFKKRGIPHDITTLNA 369
+ L + T ++ L++ K + L +A + L +K G +TT N
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT-NI 464
Query: 370 MLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKG 429
+L+ + V K ++ K + +S + Y +++ +T ++ +L ++
Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE 524
Query: 430 IEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAI 489
++P + YN ++ + C+ G + +A R+ EM+ PDVV++N + A
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584
Query: 490 GVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
++ M + G PD TY+ +++ + KL +EA +F +
Sbjct: 585 SLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 212/495 (42%), Gaps = 49/495 (9%)
Query: 26 AGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIV 85
A S++++A++ + AG N L+ +SR + A ++M + V
Sbjct: 57 AVSVFQQAVDSGSSLAFAG--------NNLMAKLVRSRNHELAFSFYRKMLETDTFINFV 108
Query: 86 TYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEM 145
+ + L+ YV+ A + M+++ +VY + LL G + A+ + EM
Sbjct: 109 SLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREM 168
Query: 146 RTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLD 205
R P++ ++N +I+ + + + ++ E+K CS +VTW L+ F + G
Sbjct: 169 RRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKM 228
Query: 206 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAV 265
E G KEMK G + + +LI + CG D+ +A++ +LE G +P TYN +
Sbjct: 229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288
Query: 266 LAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYAN-GKEFEKM---NALAEEIY 321
+ + G +++ ++ M +PN TY+ L+ GK E + N + E+
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE 348
Query: 322 SGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVA 381
T+ +++ L K +A+A KKR D T N +L L A
Sbjct: 349 EPNAVTYNIIINKLC----KDGLVADAVEIVELMKKRRTRPDNITYNILLG-----GLCA 399
Query: 382 KTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVI 441
K + L + L+YL + ++ +PD+ISYN +I
Sbjct: 400 KGD--------------LDEASKLLYLMLKDSSY--------------TDPDVISYNALI 431
Query: 442 YAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCK 501
+ C+ ++ +A I + + + D VT N + + +A+ + + +
Sbjct: 432 HGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIV 491
Query: 502 PDQNTYNSIVDWYCK 516
+ +TY +++D +CK
Sbjct: 492 RNSDTYTAMIDGFCK 506
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 78/164 (47%), Gaps = 5/164 (3%)
Query: 378 KLVAKTNKILKF-----MYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEP 432
KLV N L F M E+ ++ + L+ + + R + +L +L++G
Sbjct: 81 KLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAF 140
Query: 433 DLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVV 492
++ ++NI++ CRN + +A +L EM+ + +PDV +YNT + + +A+ +
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 493 QCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLH 536
M GC T+ ++D +CK +EA F+ + + L
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLE 244
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 173/348 (49%), Gaps = 3/348 (0%)
Query: 30 YEEALELFEEIK-LAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYT 88
+E A+++FE ++ +P++ Y L+ + GK ++P++A E+ ++M + G + YT
Sbjct: 130 WESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYT 189
Query: 89 SLISAYVRDGLLEEALELKNQMVEKH-IKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRT 147
+L+SAY R G + A L +M H +PDV+TY+ L+ F+ + + +MR
Sbjct: 190 ALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRR 249
Query: 148 AGCKPNICTFNALIKMYGDRGMFAEM-GKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDS 206
G +PN T+N LI YG MF EM + + + C PD T N+ L FG NG
Sbjct: 250 QGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIE 309
Query: 207 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVL 266
+ +++ + +G P TFN L+ +Y + G++ + AV + M + + + TYN V+
Sbjct: 310 MMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVI 369
Query: 267 AALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKIT 326
A R G +Q E + M++ R P+ VT SL+ AY + +K+ + I + I
Sbjct: 370 DAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIR 429
Query: 327 THAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLY 374
V LV + + AE + +K+G D T M+ Y
Sbjct: 430 LDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAY 477
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 162/347 (46%), Gaps = 10/347 (2%)
Query: 116 KPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGK 175
KP+V Y L+ K+ E A +F+EM GC N + AL+ Y G F
Sbjct: 147 KPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFT 206
Query: 176 VFKEIKACQ-CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAY 234
+ + +K+ C PD+ T++ L+ F Q +V + +M+R G P T+NTLI AY
Sbjct: 207 LLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAY 266
Query: 235 SRCGSFDQARAVYKRML-EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPN 293
+ F + + +ML E PD T N+ L A G E E + ++ +PN
Sbjct: 267 GKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPN 326
Query: 294 EVTYSSLLHAYANGKEFEKMNALAEEI----YSGKITTHAVLLKTLVLVNSKFDFLAEAE 349
T++ LL +Y ++KM+A+ E + YS I T+ V++ + L + E
Sbjct: 327 IRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAF----GRAGDLKQME 382
Query: 350 HAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLH 409
+ F + I TL +++ YGR K +L+F+ S L L +N L+ +
Sbjct: 383 YLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAY 442
Query: 410 SRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRI 456
R F + + +L + +KG +PD I+Y ++ AY +G T K +
Sbjct: 443 GRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKEL 489
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 166/334 (49%), Gaps = 10/334 (2%)
Query: 187 PDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAV 246
P++ + L+ + G+ + +F+EM G V E + L+SAYSR G FD A +
Sbjct: 148 PNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTL 207
Query: 247 YKRMLEA-GVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA 305
+RM + PD+ TY+ ++ + + +++ + +LS+M +PN +TY++L+ AY
Sbjct: 208 LERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYG 267
Query: 306 NGKEFEKMNA-----LAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI 360
K F +M + L E+ T L+ N + + + E+ + +F+ GI
Sbjct: 268 KAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFG-GNGQIEMM---ENCYEKFQSSGI 323
Query: 361 PHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEM 420
+I T N +L YG+ K + ++++M + ++ ++ YN ++ R + ++ E
Sbjct: 324 EPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEY 383
Query: 421 ILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYA 480
+ R + + I P ++ ++ AY R K + +L +++ D+V +N V Y
Sbjct: 384 LFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYG 443
Query: 481 ANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWY 514
F E GV++ M K+G KPD+ TY ++V Y
Sbjct: 444 RMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAY 477
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 152/306 (49%), Gaps = 2/306 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLA-GLRPDMVTYNALLDVY 59
+ +M ++G + + L+S ++ A L E +K + +PD+ TY+ L+ +
Sbjct: 172 LFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSF 231
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMV-EKHIKPD 118
+ + ++L M +G P+ +TY +LI AY + + E QM+ E KPD
Sbjct: 232 LQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPD 291
Query: 119 VYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFK 178
+T + L F + E+ +E+ +++G +PNI TFN L+ YG G + +M V +
Sbjct: 292 SWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVME 351
Query: 179 EIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 238
++ S IVT+N ++ FG+ G ++ +F+ M+ P T +L+ AY R
Sbjct: 352 YMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRAS 411
Query: 239 SFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYS 298
D+ V + + + + DL +N ++ A R + + + VL ME KP+++TY
Sbjct: 412 KADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYR 471
Query: 299 SLLHAY 304
+++ AY
Sbjct: 472 TMVKAY 477
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 117/239 (48%), Gaps = 1/239 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L DM+ QG+ P+ T+NTLI +A E L + + +PD T N+ L +
Sbjct: 243 LLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAF 302
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
G + + + ++ +S G P+I T+ L+ +Y + G ++ + M + H +
Sbjct: 303 GGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTI 362
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TY ++ F A + +F M++ P+ T +L++ YG ++G V +
Sbjct: 363 VTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRF 422
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 238
I+ D+V +N L+ +G+ +E+ GV + M++ GF P++ T+ T++ AY G
Sbjct: 423 IENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISG 481
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%)
Query: 6 KSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRP 65
+S G+ P++ TFN L+ Y++ + E ++ +VTYN ++D +G++
Sbjct: 319 QSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDL 378
Query: 66 KEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTL 125
K+ + + M+S PS VT SL+ AY R ++ + + I+ D+ + L
Sbjct: 379 KQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCL 438
Query: 126 LSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGM 169
+ + +K V E M G KP+ T+ ++K Y GM
Sbjct: 439 VDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGM 482
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M+S+ + P T +L+ S ++ + I+ + +R D+V +N L+D YG+ +
Sbjct: 388 MQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEK 447
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALEL 106
E VL+ ME +GF P +TY +++ AY G+ EL
Sbjct: 448 FAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKEL 489
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 173/320 (54%), Gaps = 3/320 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L+++ G +P++ + TLI CC+ G + E+A +LF E+ GL + TY L++
Sbjct: 185 LLIELTEFGFSPNVVIYTTLIDGCCKKGEI-EKAKDLFFEMGKLGLVANERTYTVLINGL 243
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
K+ K+ E+ ++M+ G P++ TY +++ +DG ++A ++ ++M E+ + ++
Sbjct: 244 FKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNI 303
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TY TL+ G K A +V ++M++ G PN+ T+N LI + G + + ++
Sbjct: 304 VTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRD 363
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+K+ SP +VT+N L++ F + G S + + KEM+ G P + T+ LI ++R +
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDN 423
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
++A + M E G+ PD+ TY+ ++ G ++ ++ M C+PNEV Y++
Sbjct: 424 MEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT 483
Query: 300 LLHAYAN-GKEFEKMNALAE 318
++ Y G + + L E
Sbjct: 484 MILGYCKEGSSYRALKLLKE 503
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 111/464 (23%), Positives = 220/464 (47%), Gaps = 36/464 (7%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M G P FN L++ S + + F E K + + D+ ++ L+ ++
Sbjct: 119 EMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK-SKVVLDVYSFGILIKGCCEAG 177
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+++ ++L ++ GF P++V YT+LI + G +E+A +L +M + + + TYT
Sbjct: 178 EIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYT 237
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
L++G + ++E+M+ G PN+ T+N ++ G + +VF E++
Sbjct: 238 VLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRER 297
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
S +IVT+NTL+ + +E + V +MK G P T+NTLI + G +A
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
++ + + G++P L TYN +++ R G + K++ EME KP++VTY+ L+
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
+A EK A+ L+ L ++ G+ D
Sbjct: 418 FARSDNMEK----------------AIQLR-------------------LSMEELGLVPD 442
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILR 423
+ T + ++ + K + + +++ K M E + YN+++ + + + ++ +L+
Sbjct: 443 VHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLK 502
Query: 424 EILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVP 467
E+ EK + P++ SY +I C+ K EA+R++ +M D P
Sbjct: 503 EMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 120/504 (23%), Positives = 223/504 (44%), Gaps = 16/504 (3%)
Query: 27 GSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVT 86
G+L+ A L ++ + T ++LL +S K +
Sbjct: 52 GNLFSHAQSLLLQVISGKIHSQFFTSSSLLHYLTESETSKTKFRL--------------- 96
Query: 87 YTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMR 146
Y +I++YV+ L ++ N+MV+ P + LL+ V + F E +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 147 TAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDS 206
+ ++ +F LIK + G + + E+ SP++V + TL+ + G
Sbjct: 157 SK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 207 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVL 266
+ +F EM + G V T+ LI+ + G Q +Y++M E GV P+L TYN V+
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 267 AALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKIT 326
L + G + + +V EM N VTY++L+ + + N + +++ S I
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 327 THAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKI 386
+ + TL+ L +A + K RG+ + T N ++S + RK + K+
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 387 LKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCR 446
+K M E G S Y L+ +R+ N K+ + + E G+ PD+ +Y+++I+ +C
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455
Query: 447 NGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNT 506
G+M EA R+ M + P+ V YNT + Y A+ +++ M ++ P+ +
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 515
Query: 507 YNSIVDWYCKLHLREEAYNFVHNL 530
Y +++ CK +EA V +
Sbjct: 516 YRYMIEVLCKERKSKEAERLVEKM 539
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 198/451 (43%), Gaps = 1/451 (0%)
Query: 52 YNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMV 111
Y +++ Y +S+ ++ +M GF P + L++ V + N+
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 112 EKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFA 171
K + DVY++ L+ G A + E + + E+ G PN+ + LI +G
Sbjct: 157 SK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 172 EMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLI 231
+ +F E+ + T+ L+ +NG+ + ++++M+ G P T+N ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 232 SAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCK 291
+ + G A V+ M E GV+ ++ TYN ++ L R ++ KV+ +M++
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 292 PNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHA 351
PN +TY++L+ + + K +L ++ S ++ V LV + + A
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 352 FLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSR 411
E ++RGI T ++ + R + K ++ M E G + Y+ L++
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455
Query: 412 TRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVT 471
++ + + ++EK EP+ + YN +I YC+ G A ++L EM++ P+V +
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 515
Query: 472 YNTFVATYAANSMFGEAIGVVQCMIKQGCKP 502
Y + EA +V+ MI G P
Sbjct: 516 YRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 153/334 (45%), Gaps = 14/334 (4%)
Query: 212 FKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALAR 271
F EM GFVP FN L++ SF+Q + + ++ V D+ ++ ++
Sbjct: 117 FNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN-KSKVVLDVYSFGILIKGCCE 175
Query: 272 GGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVL 331
G E+S +L E+ PN V Y++L+ E EK L E+ GK+ A
Sbjct: 176 AGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM--GKLGLVANE 233
Query: 332 LKTLVLVNSKFDFLAEAE--HAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKF 389
VL+N F + + + + ++ G+ ++ T N +++ + ++
Sbjct: 234 RTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDE 293
Query: 390 MYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGK 449
M E G + ++ YN+L+ R ++ ++ ++ GI P+LI+YN +I +C GK
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353
Query: 450 MTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNS 509
+ +A + ++K P +VTYN V+ + A +V+ M ++G KP + TY
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413
Query: 510 IVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEKG 543
++D + + E+A + L +S EE G
Sbjct: 414 LIDTFARSDNMEKA---------IQLRLSMEELG 438
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 83/166 (50%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
M+ +M+ +G+ P T+ LI E+A++L ++ GL PD+ TY+ L+ +
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFC 454
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ EA + K M + P+ V Y ++I Y ++G AL+L +M EK + P+V
Sbjct: 455 IKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVA 514
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGD 166
+Y ++ +K + A R+ E+M +G P+ + + + D
Sbjct: 515 SYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRAKND 560
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 199/434 (45%)
Query: 93 AYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKP 152
YV +G+ EE L + + MV+K + D + L ++ +L + +F M +G K
Sbjct: 163 VYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKI 222
Query: 153 NICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVF 212
+ + +++ RG + K+ KE P+ T+NT++ + + S V GV
Sbjct: 223 TVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVL 282
Query: 213 KEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARG 272
K MK+ G V + T+ L+ + G A ++ M E G+ D+ Y ++++ R
Sbjct: 283 KVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRK 342
Query: 273 GLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLL 332
G +++ + E+ P+ TY +L+ E L E+ S + V+
Sbjct: 343 GNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF 402
Query: 333 KTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYE 392
TL+ + + EA + +++G D+ T N + S + R K + + L M E
Sbjct: 403 NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMME 462
Query: 393 SGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTE 452
G LS Y +L+ ++ + N +++ + E+ KG++P+ I+YN++IYAYC+ GK+ E
Sbjct: 463 GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKE 522
Query: 453 AKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
A+++ M+ PD TY + + EA+ + M +G + TY ++
Sbjct: 523 ARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMIS 582
Query: 513 WYCKLHLREEAYNF 526
K +EA+
Sbjct: 583 GLSKAGKSDEAFGL 596
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 194/450 (43%)
Query: 29 LYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYT 88
++EE L +F+ + GL D + L K RR +E+ ++M G ++ + T
Sbjct: 169 MFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLT 228
Query: 89 SLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTA 148
++ R G +E++ +L + K IKP+ YTY T+++ +V + V + M+
Sbjct: 229 IVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKD 288
Query: 149 GCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEV 208
G N T+ L+++ G ++ K+F E++ D+ + +L++ + G
Sbjct: 289 GVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRA 348
Query: 209 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAA 268
+F E+ G P T+ LI + G A + M GV +N ++
Sbjct: 349 FLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDG 408
Query: 269 LARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTH 328
R G+ +++ + ME + + T +++ + K +++ + G +
Sbjct: 409 YCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLS 468
Query: 329 AVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILK 388
V L+ V K + EA+ F+E +G+ + T N M+ Y ++ + + K+
Sbjct: 469 TVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRA 528
Query: 389 FMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNG 448
M +G Y SL++ N ++ + E+ KG++ + ++Y ++I + G
Sbjct: 529 NMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAG 588
Query: 449 KMTEAKRILNEMKDPAPVPDVVTYNTFVAT 478
K EA + +EMK D Y + +
Sbjct: 589 KSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 169/371 (45%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
++ + +G+ P+ T+NT+I+ + + + +K G+ + VTY L+++
Sbjct: 246 LIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSV 305
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K+ + +A ++ +M RG + YTSLIS R G ++ A L +++ EK + P Y
Sbjct: 306 KNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSY 365
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY L+ G + A + EM++ G FN LI Y +GM E ++ +
Sbjct: 366 TYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVM 425
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ D+ T NT+ + F + E M G ++ LI Y + G+
Sbjct: 426 EQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNV 485
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
++A+ ++ M GV P+ TYN ++ A + G +++ K+ + ME P+ TY+SL
Sbjct: 486 EEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSL 545
Query: 301 LHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI 360
+H ++ L E+ + ++V ++ SK EA + E K++G
Sbjct: 546 IHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGY 605
Query: 361 PHDITTLNAML 371
D A++
Sbjct: 606 TIDNKVYTALI 616
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 163/341 (47%), Gaps = 2/341 (0%)
Query: 193 NTLLAVFGQNGLDSEVSGVFKEMKRAGF-VPERETFNTLISAYSRCGSFDQARAVYKRML 251
+ + V+ NG+ E VF M + G + ER L++A R D +++RM+
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKR-RRIDLCLEIFRRMV 216
Query: 252 EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE 311
++GV + + V+ L R G E+S+K++ E KP TY+++++AY ++F
Sbjct: 217 DSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFS 276
Query: 312 KMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAML 371
+ + + + + + V L+ ++ K +++AE F E ++RGI D+ +++
Sbjct: 277 GVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLI 336
Query: 372 SLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIE 431
S RK + + + + E G + S Y +L+ + +E+++ E+ KG+
Sbjct: 337 SWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVN 396
Query: 432 PDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGV 491
+ +N +I YCR G + EA I + M+ DV T NT + + + EA
Sbjct: 397 ITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQW 456
Query: 492 VQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSS 532
+ M++ G K +Y +++D YCK EEA +SS
Sbjct: 457 LFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSS 497
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 139/304 (45%), Gaps = 41/304 (13%)
Query: 4 DMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
+M+ +G+ D+ + +LIS CR G++ + A LF+E+ GL P TY AL+D K
Sbjct: 319 EMRERGIESDVHVYTSLISWNCRKGNM-KRAFLLFDELTEKGLSPSSYTYGALIDGVCKV 377
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYT- 121
A ++ +M+S+G + V + +LI Y R G+++EA + + M +K + DV+T
Sbjct: 378 GEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTC 437
Query: 122 ----------------------------------YTTLLSGFVNAKKDELAMRVFEEMRT 147
YT L+ + E A R+F EM +
Sbjct: 438 NTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSS 497
Query: 148 AGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDS- 206
G +PN T+N +I Y +G E K+ ++A PD T+ +L + G+ D+
Sbjct: 498 KGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSL--IHGECIADNV 555
Query: 207 -EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAV 265
E +F EM G T+ +IS S+ G D+A +Y M G T D Y A+
Sbjct: 556 DEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTAL 615
Query: 266 LAAL 269
+ ++
Sbjct: 616 IGSM 619
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 118/234 (50%), Gaps = 2/234 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
++ +M+S+G+ FNTLI CR G + +EA +++ ++ G + D+ T N + +
Sbjct: 386 LMNEMQSKGVNITQVVFNTLIDGYCRKG-MVDEASMIYDVMEQKGFQADVFTCNTIASCF 444
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
+ +R EA + L +M G S V+YT+LI Y ++G +EEA L +M K ++P+
Sbjct: 445 NRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNA 504
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TY ++ + K + A ++ M G P+ T+ +LI E ++F E
Sbjct: 505 ITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSE 564
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISA 233
+ + VT+ +++ + G E G++ EMKR G+ + + + LI +
Sbjct: 565 MGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 90/181 (49%)
Query: 359 GIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKS 418
G+ + +L ++ R+ V K+ K++K G YN+++ + + R+F
Sbjct: 219 GVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGV 278
Query: 419 EMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVAT 478
E +L+ + + G+ + ++Y +++ +NGKM++A+++ +EM++ DV Y + ++
Sbjct: 279 EGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISW 338
Query: 479 YAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVS 538
A + + ++G P TY +++D CK+ A ++ + S ++++
Sbjct: 339 NCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNIT 398
Query: 539 E 539
+
Sbjct: 399 Q 399
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 90/205 (43%)
Query: 347 EAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLM 406
E F K+G+ D + L +++ + +I + M +SG +++ ++
Sbjct: 172 EGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVV 231
Query: 407 YLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPV 466
R KS+ +++E KGI+P+ +YN +I AY + + + +L MK V
Sbjct: 232 EGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVV 291
Query: 467 PDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNF 526
+ VTY + N +A + M ++G + D + Y S++ W C+ + A+
Sbjct: 292 YNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLL 351
Query: 527 VHNLSSLDLHVSEEEKGRLLERIAE 551
L+ L S G L++ + +
Sbjct: 352 FDELTEKGLSPSSYTYGALIDGVCK 376
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 199/437 (45%)
Query: 87 YTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMR 146
Y ++ +R L+++L+L MV+ P + ++ LLS KK ++ + ++E+M+
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 147 TAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDS 206
G N+CT N L+ + + ++ P IVT+ +LL F +
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 207 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVL 266
+ +F +M G+ P +NT+I + D A + RM + G+ PD+ TYN+++
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 267 AALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKIT 326
+ L G W + +++S M P+ T+++L+ A + EE+ +
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 327 THAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKI 386
V L+ + L EAE F +G D+ T + +++ Y + K V K+
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 387 LKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCR 446
M + G + Y L+ + R +E I R ++ G+ P++I+YN++++ C
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408
Query: 447 NGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNT 506
NGK+ +A IL +M+ D+VTYN + +A + + QG PD T
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWT 468
Query: 507 YNSIVDWYCKLHLREEA 523
Y +++ K LR EA
Sbjct: 469 YTTMMLGLYKKGLRREA 485
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/474 (22%), Positives = 214/474 (45%), Gaps = 35/474 (7%)
Query: 31 EEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSL 90
+++L+LF + P + ++ LL K ++ + + +QM+ G P ++ T L
Sbjct: 63 DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122
Query: 91 ISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
++ + R L AL +M++ +P + T+ +LL+GF + A+ +F++M G
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY 182
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
KPN+ +N +I + ++ PD+VT+N+L++ +G S+ +
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
+ M + P+ TFN LI A + G +A Y+ M+ + PD+ TY+ ++ L
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAV 330
+++E++ M + C P+ VTYS L++ Y K+ E H +
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVE----------------HGM 346
Query: 331 LLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFM 390
L F E +RG+ + T ++ Y R + +I + M
Sbjct: 347 KL-------------------FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
Query: 391 YESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKM 450
G ++ YN L++ K+ +IL ++ + G++ D+++YNI+I C+ G++
Sbjct: 388 VFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEV 447
Query: 451 TEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQ 504
+A I + +PD+ TY T + + EA + + M + G P++
Sbjct: 448 ADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 183/391 (46%), Gaps = 2/391 (0%)
Query: 5 MKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M+ G+ +LCT N L++C CR L L + IKL G P +VT+ +LL+ + +
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKL-GHEPSIVTFGSLLNGFCRGD 165
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
R +A+ + QM G+ P++V Y ++I + ++ AL+L N+M + I PDV TY
Sbjct: 166 RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
+L+SG ++ + A R+ M P++ TFNALI G +E + ++E+
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR 285
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
PDIVT++ L+ E +F M G P+ T++ LI+ Y + +
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
++ M + GV + TY ++ R G +E++ M PN +TY+ LLH
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHG 405
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
+ + EK + ++ + V ++ K +A+A + +G+ D
Sbjct: 406 LCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD 465
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESG 394
I T M+ +K L + + + + M E G
Sbjct: 466 IWTYTTMMLGLYKKGLRREADALFRKMKEDG 496
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 148/294 (50%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L M+ G+ PD+ T+N+LIS + + +A + + + PD+ T+NAL+D
Sbjct: 208 LLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACV 267
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K R EA E ++M R P IVTY+ LI L+EA E+ MV K PDV
Sbjct: 268 KEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVV 327
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY+ L++G+ +KK E M++F EM G N T+ LI+ Y G ++F+ +
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
C P+I+T+N LL NG + + +M++ G + T+N +I + G
Sbjct: 388 VFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEV 447
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNE 294
A +Y + G+ PD+ TY ++ L + GL +++ + +M+ PNE
Sbjct: 448 ADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 202/430 (46%), Gaps = 16/430 (3%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV 71
P + F+ L+S Y+ + L+E++++ G+ ++ T N LL+ + + + A+
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 72 LKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVN 131
L +M G PSIVT+ SL++ + R + +AL + +QMV KP+V Y T++ G
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 132 AKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVT 191
+K+ + A+ + M G P++ T+N+LI G +++ ++ + + PD+ T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 192 WNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRML 251
+N L+ + G SE ++EM R P+ T++ LI D+A ++ M+
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 252 EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE 311
G PD+ TY+ ++ + E K+ EM N VTY+ L+ Y
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAG--- 375
Query: 312 KMNALAEEIY--------SGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
K+N +AEEI+ I T+ VLL L N K + +A + +K G+ D
Sbjct: 376 KLN-VAEEIFRRMVFCGVHPNIITYNVLLHGLC-DNGKIE---KALVILADMQKNGMDAD 430
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILR 423
I T N ++ + VA I + G + Y ++M + R+++ + R
Sbjct: 431 IVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFR 490
Query: 424 EILEKGIEPD 433
++ E GI P+
Sbjct: 491 KMKEDGILPN 500
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 2/156 (1%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+ +M +G+ + T+ LI CRAG L A E+F + G+ P+++TYN LL
Sbjct: 348 LFCEMSQRGVVRNTVTYTILIQGYCRAGKL-NVAEEIFRRMVFCGVHPNIITYNVLLHGL 406
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
+ + ++A+ +L M+ G IVTY +I + G + +A ++ + + + PD+
Sbjct: 407 CDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDI 466
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNIC 155
+TYTT++ G A +F +M+ G PN C
Sbjct: 467 WTYTTMMLGLYKKGLRREADALFRKMKEDGILPNEC 502
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 4/159 (2%)
Query: 382 KTNKILKFMYESGFTLSLP----GYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISY 437
K ++ +++E L +P N L+ R + L ++++ G EP ++++
Sbjct: 95 KKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTF 154
Query: 438 NIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIK 497
++ +CR ++ +A + ++M P+VV YNT + + A+ ++ M K
Sbjct: 155 GSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEK 214
Query: 498 QGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLH 536
G PD TYNS++ C +A V ++ +++
Sbjct: 215 DGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIY 253
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 182/362 (50%), Gaps = 7/362 (1%)
Query: 26 AGSLYEEALELFEEIKLAGL-RPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSI 84
A + +ALE+F+ ++ +P TY LL + GKS +P A ++ +M G P++
Sbjct: 100 AKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTV 159
Query: 85 VTYTSLISAYVRDGLLEEALELKNQMVE-KHIKPDVYTYTTLLSGFVNAKKDELAMRVFE 143
YT+L++AY R L+++A + ++M +PDV+TY+TLL V+A + +L +++
Sbjct: 160 ELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYK 219
Query: 144 EMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE-IKACQCSPDIVTWNTLLAVFGQN 202
EM PN T N ++ YG G F +M KV + + + C PD+ T N +L+VFG
Sbjct: 220 EMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNM 279
Query: 203 GLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAV--YKRMLEAGVTPDLS 260
G + +++ + G PE TFN LI +Y + +D+ +V Y R LE T S
Sbjct: 280 GKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTT--S 337
Query: 261 TYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEI 320
TYN ++ A A G + E +M + K + T+ L++ YAN F K+ + +
Sbjct: 338 TYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLA 397
Query: 321 YSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLV 380
+I + ++ +K D L E E ++ K+R D T M+ Y ++ +
Sbjct: 398 AKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEGMN 457
Query: 381 AK 382
K
Sbjct: 458 DK 459
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 154/318 (48%), Gaps = 2/318 (0%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIK-LAGLRPDMVTYNALLDVYGKS 62
+M +GL P + + L++ +L ++A + +++K +PD+ TY+ LL +
Sbjct: 149 EMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDA 208
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALE-LKNQMVEKHIKPDVYT 121
+ + K+M+ R P+ VT ++S Y R G ++ + L + +V KPDV+T
Sbjct: 209 SQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWT 268
Query: 122 YTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK 181
+LS F N K ++ +E+ R G +P TFN LI YG + M+ +M V + ++
Sbjct: 269 MNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMR 328
Query: 182 ACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFD 241
+ T+N ++ F G + F +M+ G + +TF LI+ Y+ G F
Sbjct: 329 KLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFH 388
Query: 242 QARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL 301
+ + + + + + + YNAV++A A+ + E+V M+ +C + T+ ++
Sbjct: 389 KVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMV 448
Query: 302 HAYANGKEFEKMNALAEE 319
AY +K+ L +E
Sbjct: 449 EAYEKEGMNDKIYYLEQE 466
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/436 (22%), Positives = 188/436 (43%), Gaps = 56/436 (12%)
Query: 119 VYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC-KPNICTFNALIKMYGDRGMFAEMGKVF 177
V T T LS + K+ A+ VF+ +R +P T+ L+ + G G K+F
Sbjct: 88 VNTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLF 147
Query: 178 KEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKR-AGFVPERETFNTLISAYSR 236
E+ P + + LLA + ++ L + + +MK P+ T++TL+ A
Sbjct: 148 DEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVD 207
Query: 237 CGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM-ENGRCKPNEV 295
FD ++YK M E +TP+ T N VL+ R G ++Q EKVLS+M + CKP+
Sbjct: 208 ASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVW 267
Query: 296 TYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEF 355
T + +L + N + + M E + +F
Sbjct: 268 TMNIILSVFGNMGKIDMM-----------------------------------ESWYEKF 292
Query: 356 KKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNF 415
+ GI + T N ++ YG+K++ K + ++++M + F + YN+++ + +
Sbjct: 293 RNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDA 352
Query: 416 RKSEMILREILEKGIEPDLISYNIVIYAYCRNG---KMTEAKRILNEMKDPAPVPDVVTY 472
+ E+ ++ +G++ D ++ +I Y G K+ + ++ + + P + Y
Sbjct: 353 KNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPE---NTAFY 409
Query: 473 NTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSS 532
N ++ A E V M ++ C D T+ +V+ Y K + ++ Y
Sbjct: 410 NAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEGMNDKIYYL------ 463
Query: 533 LDLHVSEEEKGRLLER 548
E+E+ +L++R
Sbjct: 464 ------EQERQKLMDR 473
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 130/553 (23%), Positives = 248/553 (44%), Gaps = 44/553 (7%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L MK QG F ++IS R L E A+E+F IK G P + YN +LD
Sbjct: 98 LLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLL 157
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
R + V + M+ GF P++ TY L+ A ++ ++ A +L +M K PD
Sbjct: 158 GENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAV 217
Query: 121 TYTTLLS-----GFVNAKKDELAMR--------------------------VFEEMRTAG 149
+YTT++S G V + ELA R + EM G
Sbjct: 218 SYTTVISSMCEVGLVKEGR-ELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKG 276
Query: 150 CKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVS 209
PN+ +++ LI + + G ++ C P+I T ++L+ G +
Sbjct: 277 ISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDAL 336
Query: 210 GVFKEMKRA-GFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAA 268
++ +M R G P +NTL+ + G+ +A +V+ M E G +P++ TY +++
Sbjct: 337 DLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLING 396
Query: 269 LARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAE----EIYSGK 324
A+ G + + + ++M C PN V Y++++ A +F++ +L E E +
Sbjct: 397 FAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPS 456
Query: 325 ITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRG-IPHDITTLNAMLSLYGRKKLVAKT 383
+ T +K L + D+ AE F + +++ P +I T N +L + + +
Sbjct: 457 VPTFNAFIKGLCDA-GRLDW---AEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEA 512
Query: 384 NKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYA 443
+ + ++ G S YN+L++ + ++ +++ G PD I+ N++I A
Sbjct: 513 YGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILA 572
Query: 444 YCRNGKMTEAKRILNEMK--DPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCK 501
YC+ GK A ++L+ + PDV++Y + ++ + + +++ MI G
Sbjct: 573 YCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIV 632
Query: 502 PDQNTYNSIVDWY 514
P T++ +++ +
Sbjct: 633 PSIATWSVLINCF 645
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/506 (22%), Positives = 231/506 (45%), Gaps = 8/506 (1%)
Query: 25 RAGSLYEEALELFEEIKLAGL-RPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPS 83
R S AL F+ I + L + +T+ ++ + +L+QM+ +GF S
Sbjct: 51 RQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCS 110
Query: 84 IVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFE 143
+ S+IS Y + GL E A+E+ ++ E P V Y +L + + ++ V+
Sbjct: 111 EDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYR 170
Query: 144 EMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNG 203
+M+ G +PN+ T+N L+K K+ E+ C PD V++ T+++ + G
Sbjct: 171 DMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVG 230
Query: 204 LDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYN 263
L E +E+ F P +N LI+ + + A + + M+E G++P++ +Y+
Sbjct: 231 LVKE----GRELAER-FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYS 285
Query: 264 AVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA-YANGKEFEKMNALAEEIYS 322
++ L G E + L++M C PN T SSL+ + G F+ ++ + I
Sbjct: 286 TLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRG 345
Query: 323 GKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAK 382
+ + V TLV + +A F ++ G +I T ++++ + ++ +
Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDG 405
Query: 383 TNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIY 442
I M SG ++ Y +++ R F+++E ++ + ++ P + ++N I
Sbjct: 406 AVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIK 465
Query: 443 AYCRNGKMTEAKRILNEMKDPAPV-PDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCK 501
C G++ A+++ +M+ P++VTYN + A + EA G+ + + +G +
Sbjct: 466 GLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE 525
Query: 502 PDQNTYNSIVDWYCKLHLREEAYNFV 527
+TYN+++ C L A V
Sbjct: 526 WSSSTYNTLLHGSCNAGLPGIALQLV 551
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 168/344 (48%), Gaps = 8/344 (2%)
Query: 2 LMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEE-IKLAGLRPDMVTYNALLDVYG 60
L M +G P++ T ++L+ C +AL+L+ + I+ GL+P++V YN L+ +
Sbjct: 304 LTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFC 363
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+A+ V ME G P+I TY SLI+ + + G L+ A+ + N+M+ P+V
Sbjct: 364 SHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVV 423
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
YT ++ K + A + E M C P++ TFNA IK D G KVF+++
Sbjct: 424 VYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 483
Query: 181 -KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+ +C P+IVT+N LL + E G+ +E+ G T+NTL+ G
Sbjct: 484 EQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGL 543
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCK--PNEVTY 297
A + +M+ G +PD T N ++ A + G E++ ++L + GR K P+ ++Y
Sbjct: 544 PGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISY 603
Query: 298 SSLLHAYANGKEFEKMNALAEEIYSG----KITTHAVLLKTLVL 337
++++ E L E + S I T +VL+ +L
Sbjct: 604 TNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFIL 647
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 198/456 (43%), Gaps = 13/456 (2%)
Query: 80 FPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAM 139
F + +T+ +I DG ++ L QM + + +++S + E A+
Sbjct: 72 FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV 131
Query: 140 RVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVF 199
+F ++ GC P++ +N ++ + V++++K P++ T+N LL
Sbjct: 132 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 191
Query: 200 GQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDL 259
+N + EM G P+ ++ T+IS+ G + R + +R P +
Sbjct: 192 CKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVV 246
Query: 260 STYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE-KMNALAE 318
S YNA++ L + ++ + +++ EM PN ++YS+L++ N + E + L +
Sbjct: 247 SVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ 306
Query: 319 EIYSG---KITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYG 375
+ G I T + L+K L + FD L F G+ ++ N ++ +
Sbjct: 307 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGF---GLQPNVVAYNTLVQGFC 363
Query: 376 RKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLI 435
+ K + M E G + ++ Y SL+ ++ + + I ++L G P+++
Sbjct: 364 SHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVV 423
Query: 436 SYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCM 495
Y ++ A CR+ K EA+ ++ M P V T+N F+ A V + M
Sbjct: 424 VYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 483
Query: 496 IKQG-CKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
+Q C P+ TYN ++D K + EEAY +
Sbjct: 484 EQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREI 519
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 178/399 (44%), Gaps = 55/399 (13%)
Query: 141 VFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLL-AVF 199
+ ++M+ G + F ++I +Y G+ ++F IK C P + +N +L +
Sbjct: 98 LLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLL 157
Query: 200 GQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDL 259
G+N + + V+++MKR GF P T+N L+ A + D A+ + M G PD
Sbjct: 158 GENRIQM-IYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDA 216
Query: 260 STYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKE----FEKMNA 315
+Y V++++ GL ++ ++ E P Y++L++ + FE M
Sbjct: 217 VSYTTVISSMCEVGLVKEGRELAERFE-----PVVSVYNALINGLCKEHDYKGAFELMRE 271
Query: 316 LAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAF---LEFKKRGIPHDITTLNAMLS 372
+ E+ S + +++ L+ VL NS + E AF + KRG +I TL++++
Sbjct: 272 MVEKGISPNVISYSTLIN--VLCNS-----GQIELAFSFLTQMLKRGCHPNIYTLSSLVK 324
Query: 373 LYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEP 432
G L +++L + R F G++P
Sbjct: 325 ---------------------GCFLRGTTFDALDLWNQMIRGF-------------GLQP 350
Query: 433 DLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVV 492
++++YN ++ +C +G + +A + + M++ P++ TY + + +A A+ +
Sbjct: 351 NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIW 410
Query: 493 QCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLS 531
M+ GC P+ Y ++V+ C+ +EA + + +S
Sbjct: 411 NKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS 449
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 218/480 (45%), Gaps = 6/480 (1%)
Query: 36 LFEEIKLAGLR---PDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLIS 92
LF+E+ LA R + ++ L+ + R EA+E M+ +GF P T +++
Sbjct: 139 LFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILT 198
Query: 93 AYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKP 152
R +E A M IK +VYT+ +++ K + A M G KP
Sbjct: 199 LLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKP 258
Query: 153 NICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVF 212
I T+N L++ + RG + E+K+ PD+ T+N +L+ G SEV
Sbjct: 259 TIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEV---L 315
Query: 213 KEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARG 272
+EMK G VP+ ++N LI S G + A A M++ G+ P TYN ++ L
Sbjct: 316 REMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFME 375
Query: 273 GLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLL 332
E +E ++ E+ + VTY+ L++ Y + +K AL +E+ + I
Sbjct: 376 NKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTY 435
Query: 333 KTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYE 392
+L+ V + + EA+ F + +G+ D+ +N ++ + + + +LK M
Sbjct: 436 TSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDM 495
Query: 393 SGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTE 452
YN LM F ++ ++ E+ +GI+PD ISYN +I Y + G
Sbjct: 496 MSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKH 555
Query: 453 AKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
A + +EM P ++TYN + + N A +++ M +G P+ +++ S+++
Sbjct: 556 AFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIE 615
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 153/306 (50%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +MK GL PD ++N LI C E A +E+ G+ P TYN L+
Sbjct: 314 VLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLF 373
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ + A +++++ +G VTY LI+ Y + G ++A L ++M+ I+P +
Sbjct: 374 MENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQF 433
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TYT+L+ K A +FE++ G KP++ N L+ + G + KE+
Sbjct: 434 TYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+PD VT+N L+ G E + EMKR G P+ ++NTLIS YS+ G
Sbjct: 494 DMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDT 553
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
A V ML G P L TYNA+L L++ E +E++L EM++ PN+ ++ S+
Sbjct: 554 KHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSV 613
Query: 301 LHAYAN 306
+ A +N
Sbjct: 614 IEAMSN 619
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 215/462 (46%), Gaps = 7/462 (1%)
Query: 17 FNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQME 76
F+ L+ CC + +EA+E F +K G P T N +L + + R + A M
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 77 SRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDE 136
++ T+ +I+ ++G L++A M IKP + TY TL+ GF + E
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277
Query: 137 LAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLL 196
A + EM++ G +P++ T+N ++ + G +E V +E+K PD V++N L+
Sbjct: 278 GARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILI 334
Query: 197 AVFGQNGLDSEVSGVFK-EMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGV 255
NG D E++ ++ EM + G VP T+NTLI + A + + + E G+
Sbjct: 335 RGCSNNG-DLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI 393
Query: 256 TPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNA 315
D TYN ++ + G +++ + EM +P + TY+SL++ + + +
Sbjct: 394 VLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADE 453
Query: 316 LAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI-PHDITTLNAMLSLY 374
L E++ + V++ TL+ + + A E I P D+T M L
Sbjct: 454 LFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLC 513
Query: 375 GRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDL 434
G K + +++ M G YN+L+ +S+ + + + M+ E+L G P L
Sbjct: 514 GEGKF-EEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTL 572
Query: 435 ISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFV 476
++YN ++ +N + A+ +L EMK VP+ ++ + +
Sbjct: 573 LTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVI 614
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 217/445 (48%), Gaps = 15/445 (3%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
MK +G P T N +++ + E A + ++ ++ ++ T+N +++V K +
Sbjct: 181 MKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 240
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
K+A L ME G P+IVTY +L+ + G +E A + ++M K +PD+ TY
Sbjct: 241 LKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNP 300
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
+LS N + A V EM+ G P+ ++N LI+ + G EM +++ Q
Sbjct: 301 ILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDL-EMAFAYRDEMVKQ 356
Query: 185 -CSPDIVTWNTLL-AVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
P T+NTL+ +F +N +++ + +E++ G V + T+N LI+ Y + G +
Sbjct: 357 GMVPTFYTYNTLIHGLFMENKIEA-AEILIREIREKGIVLDSVTYNILINGYCQHGDAKK 415
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
A A++ M+ G+ P TY +++ L R +++++ ++ KP+ V ++L+
Sbjct: 416 AFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMD 475
Query: 303 AYANGKEFEKMNALAEEIYSGKI----TTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKR 358
+ ++ +L +E+ I T+ L++ L KF+ EA E K+R
Sbjct: 476 GHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLC-GEGKFE---EARELMGEMKRR 531
Query: 359 GIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKS 418
GI D + N ++S Y +K + M GF +L YN+L+ S+ + +
Sbjct: 532 GIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELA 591
Query: 419 EMILREILEKGIEPDLISYNIVIYA 443
E +LRE+ +GI P+ S+ VI A
Sbjct: 592 EELLREMKSEGIVPNDSSFCSVIEA 616
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/538 (22%), Positives = 235/538 (43%), Gaps = 71/538 (13%)
Query: 9 GLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEA 68
GL PD ++ ++I YEEA ++E+K G +P+ L+++ K A
Sbjct: 379 GLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGA 438
Query: 69 MEVLKQMESRGFPPSIV----------------------------------TYTSLISAY 94
++ ++ M G S + +++SL+ AY
Sbjct: 439 IKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAY 498
Query: 95 VRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNI 154
V+ G++++ L L + + + + Y L+ + + A++++ + + N+
Sbjct: 499 VKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINL 558
Query: 155 CTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKE 214
+ +I +Y G F+E K++ +K+ D + ++ ++ ++ + G E V +
Sbjct: 559 HITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEI 618
Query: 215 M-KRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGG 273
M ++ VP+ F ++ Y +C D+ + +Y R+ ++G+ + YN V+ AR
Sbjct: 619 MDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARAL 678
Query: 274 LWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLK 333
++ EM PN VT++ LL Y K F+K+N L
Sbjct: 679 PLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNEL----------------- 721
Query: 334 TLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYES 393
FL K+ G+ D+ + N +++ YG+ K + +K M
Sbjct: 722 ------------------FLLAKRHGVV-DVISYNTIIAAYGKNKDYTNMSSAIKNMQFD 762
Query: 394 GFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEA 453
GF++SL YN+L+ + + + K IL+ + + PD +YNI+I Y G + E
Sbjct: 763 GFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEV 822
Query: 454 KRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
+L E+K+ PD+ +YNT + Y M EA+G+V+ M + PD+ TY ++V
Sbjct: 823 ADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLV 880
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 112/535 (20%), Positives = 234/535 (43%), Gaps = 11/535 (2%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L+ M++ G +P++ +NTLI+ E A LF + GL PD +Y ++++ +G
Sbjct: 336 ILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWG 395
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
++ +EA ++++ G+ P+ +LI+ + G + A++ M +
Sbjct: 396 RADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQ---- 451
Query: 121 TYTTLLSGFVNA----KKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKV 176
Y+++L + A K ++ V + + N +F++L+ Y GM + +
Sbjct: 452 -YSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGL 510
Query: 177 FKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 236
+E K + + ++ L+ ++G ++ ++ + +T+I Y+
Sbjct: 511 LREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTV 570
Query: 237 CGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM-ENGRCKPNEV 295
G F +A +Y + +GV D ++ V+ + G E++ VL M E P+
Sbjct: 571 MGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVY 630
Query: 296 TYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEF 355
+ +L Y +K+ L I I + + ++ ++ L E F E
Sbjct: 631 LFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEM 690
Query: 356 KKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNF 415
+ G + T N +L +YG+ KL K N++ G + + YN+++ + + +++
Sbjct: 691 IRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHG-VVDVISYNTIIAAYGKNKDY 749
Query: 416 RKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTF 475
++ + G L +YN ++ AY ++ +M + + IL MK PD TYN
Sbjct: 750 TNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIM 809
Query: 476 VATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
+ Y E V++ + + G PD +YN+++ Y + EEA V +
Sbjct: 810 INIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEM 864
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 168/345 (48%), Gaps = 4/345 (1%)
Query: 18 NTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQM-E 76
+T+I + EA +L+ +K +G+ D + ++ ++ +Y K+ +EA VL+ M E
Sbjct: 562 STMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDE 621
Query: 77 SRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKK-D 135
+ P + + ++ Y + L ++ L ++ + I + Y +++ A D
Sbjct: 622 QKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLD 681
Query: 136 ELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTL 195
EL+ FEEM G PN TFN L+ +YG +F ++ ++F K D++++NT+
Sbjct: 682 ELS-GTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKR-HGVVDVISYNTI 739
Query: 196 LAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGV 255
+A +G+N + +S K M+ GF E +NTL+ AY + ++ R++ KRM ++
Sbjct: 740 IAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTS 799
Query: 256 TPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNA 315
PD TYN ++ G ++ VL E++ P+ +Y++L+ AY G E+
Sbjct: 800 GPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVG 859
Query: 316 LAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI 360
L +E+ I V LV + D EA L K+ GI
Sbjct: 860 LVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 149/313 (47%), Gaps = 6/313 (1%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISC-CRAGSLYE--EALELFEEIKLAGLRPDMVTYNALLD 57
+ +++KS G+ D F+ ++ +AGSL E LE+ +E K + PD+ + +L
Sbjct: 580 LYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQK--DIVPDVYLFRDMLR 637
Query: 58 VYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKP 117
+Y K + + ++ G + Y +I+ R L+E +M+ P
Sbjct: 638 IYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTP 697
Query: 118 DVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVF 177
+ T+ LL + AK + +F + G ++ ++N +I YG + M
Sbjct: 698 NTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAI 756
Query: 178 KEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 237
K ++ S + +NTLL +G++ + + K MK++ P+ T+N +I+ Y
Sbjct: 757 KNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQ 816
Query: 238 GSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTY 297
G D+ V K + E+G+ PDL +YN ++ A GG+ E++ ++ EM P++VTY
Sbjct: 817 GWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTY 876
Query: 298 SSLLHAYANGKEF 310
++L+ A EF
Sbjct: 877 TNLVTALRRNDEF 889
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 127/595 (21%), Positives = 231/595 (38%), Gaps = 90/595 (15%)
Query: 6 KSQGLAPDLC----------TFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNAL 55
+++ L +LC FNT+I C + A + F + G+RP++ T L
Sbjct: 192 RAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGML 251
Query: 56 LDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHI 115
+ +Y K+ +EA M G Y+S+I+ Y R L ++A E+ + M + +
Sbjct: 252 MGLYQKNWNVEEAEFAFSHMRKFGIVCE-SAYSSMITIYTRLRLYDKAEEVIDLMKQDRV 310
Query: 116 KPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGK 175
+ + + +L+ + K ELA + M AG PNI +N LI YG
Sbjct: 311 RLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQG 370
Query: 176 VFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYS 235
+F + PD ++ +++ +G+ E ++E+KR G+ P TLI+ +
Sbjct: 371 LFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQA 430
Query: 236 RCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEV 295
+ G D A + M G S +L A + G + VL + + N+
Sbjct: 431 KYGDRDGAIKTIEDMTGIGCQYS-SILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQT 489
Query: 296 TYSSLLHAYANGKEFE-----------KMNALAEEIY---------SGKIT------THA 329
++SSL+ AY + + +A +Y SG++T H
Sbjct: 490 SFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHK 549
Query: 330 V---------LLKTLVLVNSKFDFLAEAEHAFLEFKKRG--------------------- 359
+ + T++ + + +EAE +L K G
Sbjct: 550 MESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSL 609
Query: 360 ---------------IPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNS 404
I D+ ML +Y + L K + + +SG + YN
Sbjct: 610 EEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNC 669
Query: 405 LMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNE---MK 461
++ +R + E++ G P+ +++N+++ Y GK K++ NE +
Sbjct: 670 VINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVY---GKAKLFKKV-NELFLLA 725
Query: 462 DPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
V DV++YNT +A Y N + ++ M G YN+++D Y K
Sbjct: 726 KRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGK 780
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/521 (20%), Positives = 220/521 (42%), Gaps = 46/521 (8%)
Query: 33 ALELFEEIKLAG-LRPDMVTYNALLDVYGKSRRPKEAMEVLKQMES-RGFPPSIVTYTSL 90
A++ F+ ++ G L + V Y+ +L V G+ A +++K++ F S + ++
Sbjct: 157 AIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTV 216
Query: 91 ISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
I A + G ++ A + + M+E ++P+V T L+ + E A F MR G
Sbjct: 217 IYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGI 276
Query: 151 KPNIC--TFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEV 208
+C ++++I +Y ++ + +V +K + + W +L + Q G
Sbjct: 277 ---VCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELA 333
Query: 209 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAA 268
+ M+ AGF P +NTLI+ Y + + A+ ++ R+ G+ PD ++Y +++
Sbjct: 334 ESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEG 393
Query: 269 LARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA-----NG--KEFEKMNALAEEIY 321
R +E+++ E++ KPN +L++ A +G K E M + +
Sbjct: 394 WGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYS 453
Query: 322 S------------GKITTHAVLLK---------------TLVLVNSKFDFLAEAEHAFLE 354
S GKI +LK +LV+ K + + E
Sbjct: 454 SILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLRE 513
Query: 355 FKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRN 414
K R + + ++ + KI ES ++L ++++ +++
Sbjct: 514 KKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGE 573
Query: 415 FRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEA---KRILNEMKDPAPVPDVVT 471
F ++E + + G+ D I ++IV+ Y + G + EA I++E KD VPDV
Sbjct: 574 FSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKD--IVPDVYL 631
Query: 472 YNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
+ + Y + + + + K G +Q YN +++
Sbjct: 632 FRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVIN 672
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 160/359 (44%), Gaps = 3/359 (0%)
Query: 17 FNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQME 76
++ LI C+ +A++++ + ++ + ++D+Y EA ++ ++
Sbjct: 526 YHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLK 585
Query: 77 SRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVE-KHIKPDVYTYTTLLSGFVNAKKD 135
S G + ++ ++ YV+ G LEEA + M E K I PDVY + +L +
Sbjct: 586 SSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQ 645
Query: 136 ELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTL 195
+ ++ +R +G N +N +I E+ F+E+ +P+ VT+N L
Sbjct: 646 DKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVL 705
Query: 196 LAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGV 255
L V+G+ L +V+ +F KR G V + ++NT+I+AY + + + K M G
Sbjct: 706 LDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGF 764
Query: 256 TPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNA 315
+ L YN +L A + E+ +L M+ P+ TY+ +++ Y +++
Sbjct: 765 SVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVAD 824
Query: 316 LAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRG-IPHDITTLNAMLSL 373
+ +E+ + TL+ + EA E + R IP +T N + +L
Sbjct: 825 VLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTAL 883
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 116/248 (46%), Gaps = 8/248 (3%)
Query: 287 NGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYS-GKITTHAVLLKTLVLVNSK---F 342
NG+ N V YS +L +E+++ L +E+ + + T++ +K
Sbjct: 167 NGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNV 226
Query: 343 DFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGY 402
++ H LEF G+ ++ T+ ++ LY + V + M + G Y
Sbjct: 227 KLASKWFHMMLEF---GVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCE-SAY 282
Query: 403 NSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKD 462
+S++ +++R R + K+E ++ + + + L ++ +++ AY + GKM A+ IL M+
Sbjct: 283 SSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEA 342
Query: 463 PAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREE 522
P+++ YNT + Y A G+ + G +PD+ +Y S+++ + + EE
Sbjct: 343 AGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEE 402
Query: 523 AYNFVHNL 530
A ++ L
Sbjct: 403 AKHYYQEL 410
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L MK PD T+N +I+ +E ++ +E+K +GL PD+ +YN L+ YG
Sbjct: 790 ILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYG 849
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALE 105
+EA+ ++K+M R P VTYT+L++A R+ EA++
Sbjct: 850 IGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIK 894
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/286 (19%), Positives = 128/286 (44%), Gaps = 10/286 (3%)
Query: 258 DLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEV-----TYSSLLHAYANGKEFEK 312
+ Y+ +L L R W+++E ++ E+ C +E ++++++A +
Sbjct: 173 NFVAYSLILRVLGRREEWDRAEDLIKEL----CGFHEFQKSYQVFNTVIYACTKKGNVKL 228
Query: 313 MNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLS 372
+ + + + + L+ + K + EAE AF +K GI + + ++M++
Sbjct: 229 ASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCE-SAYSSMIT 287
Query: 373 LYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEP 432
+Y R +L K +++ M + L L + ++ +S+ +E IL + G P
Sbjct: 288 IYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSP 347
Query: 433 DLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVV 492
++I+YN +I Y + KM A+ + + + + PD +Y + + + + EA
Sbjct: 348 NIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYY 407
Query: 493 QCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVS 538
Q + + G KP+ ++++ K R+ A + +++ + S
Sbjct: 408 QELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYS 453
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/361 (17%), Positives = 152/361 (42%), Gaps = 4/361 (1%)
Query: 135 DELAMRVFEEMRTAG-CKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC-QCSPDIVTW 192
D A++ F+ MR G N ++ ++++ G R + + KE+ + +
Sbjct: 154 DTNAIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVF 213
Query: 193 NTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLE 252
NT++ + G S F M G P T L+ Y + + ++A + M +
Sbjct: 214 NTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRK 273
Query: 253 AGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEK 312
G+ + S Y++++ R L++++E+V+ M+ R + + +L+AY+ + E
Sbjct: 274 FGIVCE-SAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMEL 332
Query: 313 MNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLS 372
++ + + + + + TL+ K + A+ F G+ D T+ +M+
Sbjct: 333 AESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIE 392
Query: 373 LYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEP 432
+GR + + + G+ + +L+ L ++ + + + ++ G +
Sbjct: 393 GWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQY 452
Query: 433 DLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVV 492
I I++ AY + GK+ +L + ++++ V Y + M + +G++
Sbjct: 453 SSI-LGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLL 511
Query: 493 Q 493
+
Sbjct: 512 R 512
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 165/328 (50%)
Query: 6 KSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRP 65
+ G D T+ T++ + +L +E+ G +P+ VTYN L+ YG++
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 66 KEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTL 125
EAM V QM+ G P VTY +LI + + G L+ A+++ +M + PD +TY+ +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 126 LSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQC 185
++ A A ++F EM GC PN+ T+N ++ ++ + K++++++
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
PD VT++ ++ V G G E VF EM++ ++P+ + L+ + + G+ ++A
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA 305
Y+ ML AG+ P++ T N++L+ R ++ ++L M +P+ TY+ LL
Sbjct: 596 WYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCT 655
Query: 306 NGKEFEKMNALAEEIYSGKITTHAVLLK 333
+G+ M + + S H LLK
Sbjct: 656 DGRSKLDMGFCGQLMASTGHPAHMFLLK 683
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 149/304 (49%), Gaps = 1/304 (0%)
Query: 146 RTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLD 205
R G K + T+ ++ G F + K+ E+ C P+ VT+N L+ +G+
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 206 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAV 265
+E VF +M+ AG P+R T+ TLI +++ G D A +Y+RM G++PD TY+ +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 266 LAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKI 325
+ L + G + K+ EM + C PN VTY+ ++ +A + ++ L ++ +
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 326 TTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNK 385
V ++ V +L EAE F E +++ D ++ L+G+ V K +
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 386 ILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYC 445
+ M +G ++P NSL+ R ++ +L+ +L G+ P L +Y +++ + C
Sbjct: 596 WYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL-SCC 654
Query: 446 RNGK 449
+G+
Sbjct: 655 TDGR 658
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 143/272 (52%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +M G P+ T+N LI + EA+ +F +++ AG +PD VTY L+D++
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K+ AM++ ++M++ G P TY+ +I+ + G L A +L +MV++ P++
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY ++ A+ + A++++ +M+ AG +P+ T++ ++++ G G E VF E+
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ PD + L+ ++G+ G + ++ M AG P T N+L+S + R
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARG 272
+A + + ML G+ P L TY +L+ G
Sbjct: 626 AEAYELLQNMLALGLRPSLQTYTLLLSCCTDG 657
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 136/287 (47%)
Query: 252 EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE 311
+ G D TY ++ L R + K+L EM C+PN VTY+ L+H+Y
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 312 KMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAML 371
+ + ++ V TL+ +++K FL A + + G+ D T + ++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 372 SLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIE 431
+ G+ + +K+ M + G T +L YN +M LH++ RN++ + + R++ G E
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 432 PDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGV 491
PD ++Y+IV+ G + EA+ + EM+ +PD Y V + +A
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 492 VQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVS 538
Q M+ G +P+ T NS++ + +++ EAY + N+ +L L S
Sbjct: 597 YQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPS 643
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 131/320 (40%), Gaps = 35/320 (10%)
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVY 247
D T+ T++ G+ ++ + EM R G P T+N LI +Y R ++A V+
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 248 KRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG 307
+M EAG PD TY ++ A+ G + + + M+ G P+ TYS +++
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLG-- 480
Query: 308 KEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTL 367
K L A F E +G ++ T
Sbjct: 481 ---------------------------------KAGHLPAAHKLFCEMVDQGCTPNLVTY 507
Query: 368 NAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILE 427
N M+ L+ + + K+ + M +GF Y+ +M + ++E + E+ +
Sbjct: 508 NIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQ 567
Query: 428 KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGE 487
K PD Y +++ + + G + +A + M P+V T N+ ++T+ + E
Sbjct: 568 KNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAE 627
Query: 488 AIGVVQCMIKQGCKPDQNTY 507
A ++Q M+ G +P TY
Sbjct: 628 AYELLQNMLALGLRPSLQTY 647
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 89/174 (51%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ +M QG P+L T+N ++ Y+ AL+L+ +++ AG PD VTY+ +++V G
Sbjct: 491 LFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLG 550
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+EA V +M+ + + P Y L+ + + G +E+A + M+ ++P+V
Sbjct: 551 HCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVP 610
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMG 174
T +LLS F+ K A + + M G +P++ T+ L+ D +MG
Sbjct: 611 TCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMG 664
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 165/328 (50%)
Query: 6 KSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRP 65
+ G D T+ T++ + +L +E+ G +P+ VTYN L+ YG++
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 66 KEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTL 125
EAM V QM+ G P VTY +LI + + G L+ A+++ +M + PD +TY+ +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 126 LSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQC 185
++ A A ++F EM GC PN+ T+N ++ ++ + K++++++
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
PD VT++ ++ V G G E VF EM++ ++P+ + L+ + + G+ ++A
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA 305
Y+ ML AG+ P++ T N++L+ R ++ ++L M +P+ TY+ LL
Sbjct: 596 WYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCT 655
Query: 306 NGKEFEKMNALAEEIYSGKITTHAVLLK 333
+G+ M + + S H LLK
Sbjct: 656 DGRSKLDMGFCGQLMASTGHPAHMFLLK 683
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 149/304 (49%), Gaps = 1/304 (0%)
Query: 146 RTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLD 205
R G K + T+ ++ G F + K+ E+ C P+ VT+N L+ +G+
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 206 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAV 265
+E VF +M+ AG P+R T+ TLI +++ G D A +Y+RM G++PD TY+ +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 266 LAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKI 325
+ L + G + K+ EM + C PN VTY+ ++ +A + ++ L ++ +
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 326 TTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNK 385
V ++ V +L EAE F E +++ D ++ L+G+ V K +
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 386 ILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYC 445
+ M +G ++P NSL+ R ++ +L+ +L G+ P L +Y +++ + C
Sbjct: 596 WYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL-SCC 654
Query: 446 RNGK 449
+G+
Sbjct: 655 TDGR 658
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 143/272 (52%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +M G P+ T+N LI + EA+ +F +++ AG +PD VTY L+D++
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K+ AM++ ++M++ G P TY+ +I+ + G L A +L +MV++ P++
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY ++ A+ + A++++ +M+ AG +P+ T++ ++++ G G E VF E+
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ PD + L+ ++G+ G + ++ M AG P T N+L+S + R
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARG 272
+A + + ML G+ P L TY +L+ G
Sbjct: 626 AEAYELLQNMLALGLRPSLQTYTLLLSCCTDG 657
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 136/287 (47%)
Query: 252 EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE 311
+ G D TY ++ L R + K+L EM C+PN VTY+ L+H+Y
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 312 KMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAML 371
+ + ++ V TL+ +++K FL A + + G+ D T + ++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 372 SLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIE 431
+ G+ + +K+ M + G T +L YN +M LH++ RN++ + + R++ G E
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 432 PDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGV 491
PD ++Y+IV+ G + EA+ + EM+ +PD Y V + +A
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 492 VQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVS 538
Q M+ G +P+ T NS++ + +++ EAY + N+ +L L S
Sbjct: 597 YQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPS 643
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 131/320 (40%), Gaps = 35/320 (10%)
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVY 247
D T+ T++ G+ ++ + EM R G P T+N LI +Y R ++A V+
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 248 KRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG 307
+M EAG PD TY ++ A+ G + + + M+ G P+ TYS +++
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLG-- 480
Query: 308 KEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTL 367
K L A F E +G ++ T
Sbjct: 481 ---------------------------------KAGHLPAAHKLFCEMVDQGCTPNLVTY 507
Query: 368 NAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILE 427
N M+ L+ + + K+ + M +GF Y+ +M + ++E + E+ +
Sbjct: 508 NIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQ 567
Query: 428 KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGE 487
K PD Y +++ + + G + +A + M P+V T N+ ++T+ + E
Sbjct: 568 KNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAE 627
Query: 488 AIGVVQCMIKQGCKPDQNTY 507
A ++Q M+ G +P TY
Sbjct: 628 AYELLQNMLALGLRPSLQTY 647
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 89/174 (51%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ +M QG P+L T+N ++ Y+ AL+L+ +++ AG PD VTY+ +++V G
Sbjct: 491 LFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLG 550
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+EA V +M+ + + P Y L+ + + G +E+A + M+ ++P+V
Sbjct: 551 HCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVP 610
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMG 174
T +LLS F+ K A + + M G +P++ T+ L+ D +MG
Sbjct: 611 TCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMG 664
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 165/328 (50%)
Query: 6 KSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRP 65
+ G D T+ T++ + +L +E+ G +P+ VTYN L+ YG++
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 66 KEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTL 125
EAM V QM+ G P VTY +LI + + G L+ A+++ +M + PD +TY+ +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 126 LSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQC 185
++ A A ++F EM GC PN+ T+N ++ ++ + K++++++
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
PD VT++ ++ V G G E VF EM++ ++P+ + L+ + + G+ ++A
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA 305
Y+ ML AG+ P++ T N++L+ R ++ ++L M +P+ TY+ LL
Sbjct: 596 WYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCT 655
Query: 306 NGKEFEKMNALAEEIYSGKITTHAVLLK 333
+G+ M + + S H LLK
Sbjct: 656 DGRSKLDMGFCGQLMASTGHPAHMFLLK 683
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 149/304 (49%), Gaps = 1/304 (0%)
Query: 146 RTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLD 205
R G K + T+ ++ G F + K+ E+ C P+ VT+N L+ +G+
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 206 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAV 265
+E VF +M+ AG P+R T+ TLI +++ G D A +Y+RM G++PD TY+ +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 266 LAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKI 325
+ L + G + K+ EM + C PN VTY+ ++ +A + ++ L ++ +
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 326 TTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNK 385
V ++ V +L EAE F E +++ D ++ L+G+ V K +
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 386 ILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYC 445
+ M +G ++P NSL+ R ++ +L+ +L G+ P L +Y +++ + C
Sbjct: 596 WYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL-SCC 654
Query: 446 RNGK 449
+G+
Sbjct: 655 TDGR 658
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 143/272 (52%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +M G P+ T+N LI + EA+ +F +++ AG +PD VTY L+D++
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K+ AM++ ++M++ G P TY+ +I+ + G L A +L +MV++ P++
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY ++ A+ + A++++ +M+ AG +P+ T++ ++++ G G E VF E+
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ PD + L+ ++G+ G + ++ M AG P T N+L+S + R
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARG 272
+A + + ML G+ P L TY +L+ G
Sbjct: 626 AEAYELLQNMLALGLRPSLQTYTLLLSCCTDG 657
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 136/287 (47%)
Query: 252 EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE 311
+ G D TY ++ L R + K+L EM C+PN VTY+ L+H+Y
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 312 KMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAML 371
+ + ++ V TL+ +++K FL A + + G+ D T + ++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 372 SLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIE 431
+ G+ + +K+ M + G T +L YN +M LH++ RN++ + + R++ G E
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 432 PDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGV 491
PD ++Y+IV+ G + EA+ + EM+ +PD Y V + +A
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 492 VQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVS 538
Q M+ G +P+ T NS++ + +++ EAY + N+ +L L S
Sbjct: 597 YQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPS 643
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 131/320 (40%), Gaps = 35/320 (10%)
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVY 247
D T+ T++ G+ ++ + EM R G P T+N LI +Y R ++A V+
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 248 KRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG 307
+M EAG PD TY ++ A+ G + + + M+ G P+ TYS +++
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLG-- 480
Query: 308 KEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTL 367
K L A F E +G ++ T
Sbjct: 481 ---------------------------------KAGHLPAAHKLFCEMVDQGCTPNLVTY 507
Query: 368 NAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILE 427
N M+ L+ + + K+ + M +GF Y+ +M + ++E + E+ +
Sbjct: 508 NIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQ 567
Query: 428 KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGE 487
K PD Y +++ + + G + +A + M P+V T N+ ++T+ + E
Sbjct: 568 KNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAE 627
Query: 488 AIGVVQCMIKQGCKPDQNTY 507
A ++Q M+ G +P TY
Sbjct: 628 AYELLQNMLALGLRPSLQTY 647
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 89/174 (51%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ +M QG P+L T+N ++ Y+ AL+L+ +++ AG PD VTY+ +++V G
Sbjct: 491 LFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLG 550
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+EA V +M+ + + P Y L+ + + G +E+A + M+ ++P+V
Sbjct: 551 HCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVP 610
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMG 174
T +LLS F+ K A + + M G +P++ T+ L+ D +MG
Sbjct: 611 TCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMG 664
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 129/500 (25%), Positives = 224/500 (44%), Gaps = 45/500 (9%)
Query: 20 LISCCRAGSLYEEALELFEEI-KLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESR 78
L+ CR +L +AL++F+ + K P+ V+Y+ L+ + R +EA + QM +
Sbjct: 237 LLGFCRGLNL-RDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK 295
Query: 79 GFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELA 138
G PS TYT LI A GL+++A L ++M+ + KP+V+TYT L+ G K E A
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 139 MRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAV 198
V +M P++ T+NALI Y G ++ ++ C P++ T+N L+
Sbjct: 356 NGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415
Query: 199 FGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPD 258
+ G + + K M G P+ ++N LI R G + A + M + PD
Sbjct: 416 LCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPD 475
Query: 259 LSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAE 318
T+ A++ A + G + + L M +EVT ++L+
Sbjct: 476 CLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCK------------ 523
Query: 319 EIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKK 378
GK +L+TLV + + PH + + MLS + K
Sbjct: 524 ---VGKTRDALFILETLV-----------------KMRILTTPHSLNVILDMLSKGCKVK 563
Query: 379 ----LVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDL 434
++ K NK+ G S+ Y +L+ R+ + S IL + G P++
Sbjct: 564 EELAMLGKINKL-------GLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNV 616
Query: 435 ISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQC 494
Y I+I C+ G++ EA+++L+ M+D P+ VTY V Y N A+ V+
Sbjct: 617 YPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRA 676
Query: 495 MIKQGCKPDQNTYNSIVDWY 514
M+++G + + Y+S++ +
Sbjct: 677 MVERGYELNDRIYSSLLQGF 696
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 175/411 (42%), Gaps = 18/411 (4%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M +G P T+ LI L ++A LF+E+ G +P++ TY L+D + +
Sbjct: 292 MGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGK 351
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+EA V ++M PS++TY +LI+ Y +DG + A EL M ++ KP+V T+
Sbjct: 352 IEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNE 411
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
L+ G K A+ + + M G P+I ++N LI G K+ +
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFD 471
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
PD +T+ ++ F + G S M R G + T TLI + G A
Sbjct: 472 IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL 531
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
+ + +++ + + N +L L++G ++ +L ++ P+ VTY++L+
Sbjct: 532 FILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGL 591
Query: 305 ANGK---------EFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEF 355
E K++ +Y I + + +F + EAE
Sbjct: 592 IRSGDITGSFRILELMKLSGCLPNVYPYTIIINGL---------CQFGRVEEAEKLLSAM 642
Query: 356 KKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLM 406
+ G+ + T M+ Y + + + ++ M E G+ L+ Y+SL+
Sbjct: 643 QDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 129/574 (22%), Positives = 237/574 (41%), Gaps = 79/574 (13%)
Query: 4 DMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
+M +G P++ T+ LI CR G + EEA + ++ + P ++TYNAL++ Y K
Sbjct: 326 EMIPRGCKPNVHTYTVLIDGLCRDGKI-EEANGVCRKMVKDRIFPSVITYNALINGYCKD 384
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
R A E+L ME R P++ T+ L+ R G +A+ L +M++ + PD+ +Y
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
L+ G A ++ M +P+ TF A+I + +G A++ F +
Sbjct: 445 NVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGK-ADVASAFLGLML 503
Query: 183 CQ-CSPDIVTWNTLLAVFGQNG---------------------------LDSEVSG---- 210
+ S D VT TL+ + G LD G
Sbjct: 504 RKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVK 563
Query: 211 ----VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVL 266
+ ++ + G VP T+ TL+ R G + + + M +G P++ Y ++
Sbjct: 564 EELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIII 623
Query: 267 AALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG----KEFEKMNALAEEIYS 322
L + G E++EK+LS M++ PN VTY+ ++ Y N + E + A+ E Y
Sbjct: 624 NGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYE 683
Query: 323 GKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYG------- 375
++ LL+ VL D E+ + + ++ P I L +++ G
Sbjct: 684 LNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETD-PECINELISVVEQLGGCISGLC 742
Query: 376 --------RKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILE 427
++ ++N +++ + E G L + +M + + K ++ +L+
Sbjct: 743 IFLVTRLCKEGRTDESNDLVQNVLERGVFLE-KAMDIIMESYCSKKKHTKCMELITLVLK 801
Query: 428 KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGE 487
G P S+ +VI + G A+ ++ E+ + V + V TY M G+
Sbjct: 802 SGFVPSFKSFCLVIQGLKKEGDAERARELVMEL----LTSNGVVEKSGVLTYVECLMEGD 857
Query: 488 AIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLRE 521
G C + ++D +LH RE
Sbjct: 858 ETG--DC-------------SEVIDLVDQLHCRE 876
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/451 (23%), Positives = 190/451 (42%), Gaps = 37/451 (8%)
Query: 11 APDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAM 69
AP+ +++ LI C G L EEA L +++ G +P TY L+ +A
Sbjct: 263 APNSVSYSILIHGLCEVGRL-EEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAF 321
Query: 70 EVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGF 129
+ +M RG P++ TYT LI RDG +EEA + +MV+ I P V TY L++G+
Sbjct: 322 NLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGY 381
Query: 130 VNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDI 189
+ A + M CKPN+ TFN L++ G + + K + SPDI
Sbjct: 382 CKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDI 441
Query: 190 VTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKR 249
V++N L+ + G + + M P+ TF +I+A+ + G D A A
Sbjct: 442 VSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGL 501
Query: 250 MLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKE 309
ML G++ D T ++ + + G + +L + R + + +L + G +
Sbjct: 502 MLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCK 561
Query: 310 FEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNA 369
++ A+ GKI K G+ + T
Sbjct: 562 VKEELAML-----GKIN------------------------------KLGLVPSVVTYTT 586
Query: 370 MLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKG 429
++ R + + +IL+ M SG ++ Y ++ + ++E +L + + G
Sbjct: 587 LVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSG 646
Query: 430 IEPDLISYNIVIYAYCRNGKMTEAKRILNEM 460
+ P+ ++Y +++ Y NGK+ A + M
Sbjct: 647 VSPNHVTYTVMVKGYVNNGKLDRALETVRAM 677
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 142/342 (41%), Gaps = 36/342 (10%)
Query: 211 VFKEM-KRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAAL 269
VF M K P +++ LI G ++A + +M E G P TY ++ AL
Sbjct: 252 VFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKAL 311
Query: 270 ARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHA 329
GL +++ + EM CKPN TY+ L+ + E+ N + ++
Sbjct: 312 CDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM--------- 362
Query: 330 VLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKF 389
K R P + T NA+++ Y + V ++L
Sbjct: 363 -------------------------VKDRIFP-SVITYNALINGYCKDGRVVPAFELLTV 396
Query: 390 MYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGK 449
M + ++ +N LM R K+ +L+ +L+ G+ PD++SYN++I CR G
Sbjct: 397 MEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH 456
Query: 450 MTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNS 509
M A ++L+ M PD +T+ + + A + M+++G D+ T +
Sbjct: 457 MNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTT 516
Query: 510 IVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEKGRLLERIAE 551
++D CK+ +A + L + + + +L+ +++
Sbjct: 517 LIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSK 558
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 128/290 (44%), Gaps = 8/290 (2%)
Query: 1 MLMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L M GL+PD+ ++N LI CR G + A +L + + PD +T+ A+++ +
Sbjct: 428 LLKRMLDNGLSPDIVSYNVLIDGLCREGHM-NTAYKLLSSMNCFDIEPDCLTFTAIINAF 486
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
K + A L M +G VT T+LI + G +AL + +V+ I
Sbjct: 487 CKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTP 546
Query: 120 YTYTTLLSGFVNA--KKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVF 177
++ +L K+ELAM ++ G P++ T+ L+ G ++
Sbjct: 547 HSLNVILDMLSKGCKVKEELAM--LGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRIL 604
Query: 178 KEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 237
+ +K C P++ + ++ Q G E + M+ +G P T+ ++ Y
Sbjct: 605 ELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNN 664
Query: 238 GSFDQARAVYKRMLEAGVTPDLSTYNAVLAA--LARGGLWEQSEKVLSEM 285
G D+A + M+E G + Y+++L L++ G+ E +S++
Sbjct: 665 GKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDI 714
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 140/328 (42%), Gaps = 57/328 (17%)
Query: 1 MLMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
ML + GL P + T+ TL+ R+G + + + E +KL+G P++ Y +++
Sbjct: 568 MLGKINKLGLVPSVVTYTTLVDGLIRSGDI-TGSFRILELMKLSGCLPNVYPYTIIINGL 626
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
+ R +EA ++L M+ G P+ VTYT ++ YV +G L+ ALE MVE+ + +
Sbjct: 627 CQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELND 686
Query: 120 YTYTTLLSGFVNAKK----------DELAMR------------VFEEMRTAGCKPNICTF 157
Y++LL GFV ++K ++A+R V E++ GC +C F
Sbjct: 687 RIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQL--GGCISGLCIF 744
Query: 158 --------------NALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNG 203
N L++ +RG+F E K I CS T L
Sbjct: 745 LVTRLCKEGRTDESNDLVQNVLERGVFLE--KAMDIIMESYCSKKKHTKCMELITL---- 798
Query: 204 LDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYN 263
+ ++GFVP ++F +I + G ++AR + +L + + S
Sbjct: 799 -----------VLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVL 847
Query: 264 AVLAALARGGLWEQSEKVLSEMENGRCK 291
+ L G +V+ ++ C+
Sbjct: 848 TYVECLMEGDETGDCSEVIDLVDQLHCR 875
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/526 (22%), Positives = 228/526 (43%), Gaps = 51/526 (9%)
Query: 18 NTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQME 76
++++ C C+ G+ + EA +LF+E + + D V YN D GK + +EA+E+ ++M
Sbjct: 365 SSILQCYCQMGN-FSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMT 423
Query: 77 SRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDE 136
+G P ++ YT+LI G +A +L +M PD+ Y L G +
Sbjct: 424 GKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQ 483
Query: 137 LAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK--------------- 181
A + M G KP T N +I+ D G + ++ ++
Sbjct: 484 EAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFC 543
Query: 182 ACQCS--------------PDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETF 227
A C P V + ++ + S+ + M + G PE+ +
Sbjct: 544 AAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMY 603
Query: 228 NTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMEN 287
LI A+ R + +AR ++ ++ + PDL TY ++ R +Q+ + +M+
Sbjct: 604 GKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKR 663
Query: 288 GRCKPNEVTYSSLLHAYAN---GKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDF 344
KP+ VTYS LL++ +E E + + + +Y + +++ +N
Sbjct: 664 RDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVY------YTIMINRYCHLND---- 713
Query: 345 LAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNS 404
L + F + K+R I D+ T +L + L ++ K + + Y
Sbjct: 714 LKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNL-SREMKAFDVKPDVFY------YTV 766
Query: 405 LMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPA 464
L+ + + +++ I +++E G++PD Y +I C+ G + EAK I + M +
Sbjct: 767 LIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESG 826
Query: 465 PVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSI 510
PDVV Y +A N +A+ +V+ M+++G KP + + +++
Sbjct: 827 VKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 137/568 (24%), Positives = 227/568 (39%), Gaps = 62/568 (10%)
Query: 7 SQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPK 66
S G APD+ N LIS A + + F EI+ GL D TY ++ ++ +
Sbjct: 175 SLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKE 234
Query: 67 EAMEVLKQM---ESRGFPPSI--------------------------------------V 85
E ++L ++ E+R P + +
Sbjct: 235 ELEKLLSRLLISETRN--PCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGI 292
Query: 86 TYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEM 145
Y ++ + +E+A + M + I PDVY Y+ ++ G A+ VF +M
Sbjct: 293 AYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKM 352
Query: 146 RTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLD 205
+ N +++++ Y G F+E +FKE + S D V +N G+ G
Sbjct: 353 LKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKV 412
Query: 206 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAV 265
E +F+EM G P+ + TLI G A + M G TPD+ YN +
Sbjct: 413 EEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVL 472
Query: 266 LAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKI 325
LA GL +++ + L MEN KP VT++ ++ + E +K A E +
Sbjct: 473 AGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSR 532
Query: 326 TTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAML-SLYGRKKLVAKTN 384
A ++K +HAF F + P + + SL K ++K
Sbjct: 533 ENDASMVKGFCAAGC-------LDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQ 585
Query: 385 KILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAY 444
+L M++ G Y L+ R N RK+ ++ K I PDL +Y I+I Y
Sbjct: 586 DLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTY 645
Query: 445 CRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFG--EAIGVVQCMIKQGCKP 502
CR + +A + +MK PDVVTY+ + + M EA V+ P
Sbjct: 646 CRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVI---------P 696
Query: 503 DQNTYNSIVDWYCKLHLREEAYNFVHNL 530
D Y +++ YC L+ ++ Y ++
Sbjct: 697 DVVYYTIMINRYCHLNDLKKVYALFKDM 724
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 152/309 (49%), Gaps = 16/309 (5%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L M G+ P+ + LI CR ++ +A E FE + + PD+ TY +++ Y
Sbjct: 587 LLDRMWKLGVEPEKSMYGKLIGAWCRVNNV-RKAREFFEILVTKKIVPDLFTYTIMINTY 645
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
+ PK+A + + M+ R P +VTY+ L+++ + L++K +M + PDV
Sbjct: 646 CRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDV 698
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
YT +++ + + + +F++M+ P++ T+ L+K +R + EM
Sbjct: 699 VYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREM------ 752
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
KA PD+ + L+ + G E +F +M +G P+ + LI+ + G
Sbjct: 753 -KAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGY 811
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
+A+ ++ RM+E+GV PD+ Y A++A R G ++ K++ EM KP + + S+
Sbjct: 812 LKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSA 871
Query: 300 LLHAYANGK 308
+ +A K
Sbjct: 872 VHYAKLKAK 880
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 103/482 (21%), Positives = 188/482 (39%), Gaps = 82/482 (17%)
Query: 1 MLMDMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+ +M +G+APD+ + TLI CC G +A +L E+ G PD+V YN L
Sbjct: 418 LFREMTGKGIAPDVINYTTLIGGCCLQGKC-SDAFDLMIEMDGTGKTPDIVIYNVLAGGL 476
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTY-------------------------------T 88
+ +EA E LK ME+RG P+ VT+
Sbjct: 477 ATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDA 536
Query: 89 SLISAYVRDGLLEEALE---------------------------------LKNQMVEKHI 115
S++ + G L+ A E L ++M + +
Sbjct: 537 SMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGV 596
Query: 116 KPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGK 175
+P+ Y L+ + A FE + T P++ T+ +I Y +
Sbjct: 597 EPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYA 656
Query: 176 VFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYS 235
+F+++K PD+VT++ LL D E+ + +EM+ +P+ + +I+ Y
Sbjct: 657 LFEDMKRRDVKPDVVTYSVLL------NSDPELD-MKREMEAFDVIPDVVYYTIMINRYC 709
Query: 236 RCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLS-EMENGRCKPNE 294
+ A++K M + PD+ TY +L + E+ LS EM+ KP+
Sbjct: 710 HLNDLKKVYALFKDMKRREIVPDVVTYTVLLK--------NKPERNLSREMKAFDVKPDV 761
Query: 295 VTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLE 354
Y+ L+ + + + +++ + A L+ K +L EA+ F
Sbjct: 762 FYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDR 821
Query: 355 FKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRN 414
+ G+ D+ A+++ R V K K++K M E G + +++ Y + +
Sbjct: 822 MIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAVHYAKLKAKG 881
Query: 415 FR 416
R
Sbjct: 882 LR 883
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 132/348 (37%), Gaps = 39/348 (11%)
Query: 204 LDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYN 263
D + F+ G P+ + N LIS G D + + G+ D TY
Sbjct: 162 FDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYV 221
Query: 264 AVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSG 323
V+ AL R E+ EK+LS + + V Y + + + + L + +
Sbjct: 222 LVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDA 281
Query: 324 KITTH----AVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKL 379
I + + +V + +AE L+ +K GI D+ +A++ + +
Sbjct: 282 NILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMN 341
Query: 380 VAKT----NKILKF-------------------------------MYESGFTLSLPGYNS 404
+ K NK+LK E+ +L YN
Sbjct: 342 IPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNV 401
Query: 405 LMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPA 464
+ ++ + RE+ KGI PD+I+Y +I C GK ++A ++ EM
Sbjct: 402 AFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTG 461
Query: 465 PVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
PD+V YN A N + EA ++ M +G KP T+N +++
Sbjct: 462 KTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIE 509
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 195/427 (45%), Gaps = 37/427 (8%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS-RRPKEAMEV 71
D+ +N IS A Y++A E++E + + PD VT L+ K+ R KE E+
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 72 LKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVN 131
++M +G S + L+ ++ +GL EEAL ++ +M +K I+ + Y TL+ +
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 132 AKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVT 191
+ E +F EMR G KP+ T+N L+ Y R + + +E++ P++ +
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
Query: 192 WNTLLAVFGQNGLDSEVSG-VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRM 250
+ L++ +G+ S+++ F MK+ G P ++ LI AYS G ++A A ++ M
Sbjct: 452 YTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEM 511
Query: 251 LEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEF 310
+ G+ P + TY +VL A R G + ++ M + K +TY++LL +A
Sbjct: 512 CKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFA----- 566
Query: 311 EKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAM 370
K EA EF K G+ + T N +
Sbjct: 567 ------------------------------KQGLYIEARDVVSEFSKMGLQPSVMTYNML 596
Query: 371 LSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGI 430
++ Y R AK ++LK M Y++++Y R R+F+++ + +++ G
Sbjct: 597 MNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQ 656
Query: 431 EPDLISY 437
PD SY
Sbjct: 657 VPDPRSY 663
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 162/310 (52%), Gaps = 3/310 (0%)
Query: 5 MKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M +G+ F L+ S C G L EEAL + E++ G+R + + YN L+D Y KS
Sbjct: 335 MSEKGVKWSQDVFGGLVKSFCDEG-LKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSN 393
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+E + +M +G PS TY L+ AY R + L +M + ++P+V +YT
Sbjct: 394 HIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYT 453
Query: 124 TLLSGFVNAKK-DELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
L+S + KK ++A F M+ G KP+ ++ ALI Y G + F+E+
Sbjct: 454 CLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCK 513
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
P + T+ ++L F ++G ++ ++K M R R T+NTL+ +++ G + +
Sbjct: 514 EGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIE 573
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
AR V + G+ P + TYN ++ A ARGG + ++L EM KP+ +TYS++++
Sbjct: 574 ARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIY 633
Query: 303 AYANGKEFEK 312
A+ ++F++
Sbjct: 634 AFVRVRDFKR 643
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 142/274 (51%), Gaps = 11/274 (4%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M+ +G+ + +NTL+ + EE LF E++ GL+P TYN L+D Y +
Sbjct: 369 EMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRM 428
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEE-ALELKNQMVEKHIKPDVYTY 122
+P +L++ME G P++ +YT LISAY R + + A + +M + +KP ++Y
Sbjct: 429 QPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSY 488
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMY---GDRGMFAEMGKVF-- 177
T L+ + + E A FEEM G KP++ T+ +++ + GD G E+ K+
Sbjct: 489 TALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLR 548
Query: 178 KEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 237
++IK + +T+NTLL F + GL E V E + G P T+N L++AY+R
Sbjct: 549 EKIKGTR-----ITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARG 603
Query: 238 GSFDQARAVYKRMLEAGVTPDLSTYNAVLAALAR 271
G + + K M + PD TY+ ++ A R
Sbjct: 604 GQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVR 637
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/460 (22%), Positives = 199/460 (43%), Gaps = 37/460 (8%)
Query: 53 NALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVE 112
+ L + G+ R + +L + + + Y + IS ++A E+ M +
Sbjct: 242 SVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDK 301
Query: 113 KHIKPDVYTYTTLLSGFVNAKKD-ELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFA 171
++ PD T L++ A + + +FE+M G K + F L+K + D G+
Sbjct: 302 INVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKE 361
Query: 172 EMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLI 231
E + E++ + + +NTL+ + ++ EV G+F EM+ G P T+N L+
Sbjct: 362 EALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILM 421
Query: 232 SAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALAR-GGLWEQSEKVLSEMENGRC 290
AY+R D + + M + G+ P++ +Y +++A R + + + M+
Sbjct: 422 DAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGL 481
Query: 291 KPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEH 350
KP+ +Y++L+HAY+ EK A
Sbjct: 482 KPSSHSYTALIHAYSVSGWHEKAYA----------------------------------- 506
Query: 351 AFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHS 410
+F E K GI + T ++L + R K +I K M + YN+L+ +
Sbjct: 507 SFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFA 566
Query: 411 RTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVV 470
+ + ++ ++ E + G++P +++YN+++ AY R G+ + ++L EM PD +
Sbjct: 567 KQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSI 626
Query: 471 TYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSI 510
TY+T + + F A + M+K G PD +Y +
Sbjct: 627 TYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 189/438 (43%), Gaps = 40/438 (9%)
Query: 96 RDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNIC 155
R+ + + L L + + +K DV Y +SG +++ + A V+E M P+
Sbjct: 250 RERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNV 309
Query: 156 TFNALIKMYGDRGMFA-EMGKVFKEI--KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVF 212
T LI G A E+ ++F+++ K + S D+ + L+ F GL E +
Sbjct: 310 TCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDV--FGGLVKSFCDEGLKEEALVIQ 367
Query: 213 KEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARG 272
EM++ G +NTL+ AY++ ++ ++ M + G+ P +TYN ++ A AR
Sbjct: 368 TEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARR 427
Query: 273 GLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLL 332
+ E +L EME+ +PN +Y+ L+ AY K+ M
Sbjct: 428 MQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDM------------------- 468
Query: 333 KTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYE 392
A AFL KK G+ + A++ Y K + M +
Sbjct: 469 ---------------AADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCK 513
Query: 393 SGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTE 452
G S+ Y S++ R+ + K I + +L + I+ I+YN ++ + + G E
Sbjct: 514 EGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIE 573
Query: 453 AKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
A+ +++E P V+TYN + YA + +++ M KPD TY++++
Sbjct: 574 ARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIY 633
Query: 513 WYCKLHLREEAYNFVHNL 530
+ ++ + A+ F H +
Sbjct: 634 AFVRVRDFKRAF-FYHKM 650
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 84/165 (50%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M +G+ P + T+ +++ R + +E+++ + ++ +TYN LLD + K
Sbjct: 510 EMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQG 569
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
EA +V+ + G PS++TY L++AY R G + +L +M ++KPD TY+
Sbjct: 570 LYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYS 629
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRG 168
T++ FV + + A + M +G P+ ++ L + D+
Sbjct: 630 TMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKA 674
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 117/512 (22%), Positives = 227/512 (44%), Gaps = 46/512 (8%)
Query: 7 SQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRP 65
S+G P +FN+++S C+ G + + A ++ + G PD+++YN+L+D + ++
Sbjct: 49 SRGYTPHRSSFNSVVSFVCKLGQV-KFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDI 107
Query: 66 KEAMEVLKQME-SRGF--PPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
+ A VL+ + S GF P IV++ SL + + + +L+E M+ K P+V TY
Sbjct: 108 RSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTY 166
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
+T + F + + +LA++ F M+ PN+ TF LI Y G ++KE++
Sbjct: 167 STWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRR 226
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
+ S ++VT+ L+ F + G ++ M P + T+I + + G D
Sbjct: 227 VRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDN 286
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
A +ML G+ D++ Y +++ L G +++ +++ +ME P+ V ++++++
Sbjct: 287 AMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMN 346
Query: 303 AYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPH 362
AY SG++ + L+ +RG
Sbjct: 347 AY---------------FKSGRMKAAVNMYHKLI--------------------ERGFEP 371
Query: 363 DITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMIL 422
D+ L+ M+ G K I+ F E + Y L+ + +F + E +
Sbjct: 372 DVVALSTMID--GIAKNGQLHEAIVYFCIEKANDVM---YTVLIDALCKEGDFIEVERLF 426
Query: 423 REILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAAN 482
+I E G+ PD Y I C+ G + +A ++ M + D++ Y T + A+
Sbjct: 427 SKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASK 486
Query: 483 SMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWY 514
+ EA V M+ G PD ++ ++ Y
Sbjct: 487 GLMVEARQVFDEMLNSGISPDSAVFDLLIRAY 518
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/490 (23%), Positives = 224/490 (45%), Gaps = 17/490 (3%)
Query: 29 LYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYT 88
+ EAL+ ++ + PD T N + S +++ L + SRG+ P ++
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60
Query: 89 SLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTA 148
S++S + G ++ A ++ + M +PDV +Y +L+ G A V E +R +
Sbjct: 61 SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120
Query: 149 G---CKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLD 205
CKP+I +FN+L + M E+ + C CSP++VT++T + F ++G
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGEL 179
Query: 206 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAV 265
F MKR P TF LI Y + G + A ++YK M ++ ++ TY A+
Sbjct: 180 QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTAL 239
Query: 266 LAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA-YANGKEFEKMNALAEEIYSG- 323
+ + G +++E++ S M R +PN + Y++++ + G M LA+ + G
Sbjct: 240 IDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGM 299
Query: 324 --KITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVA 381
IT + V++ L N K L EA + +K + D+ M++ Y + +
Sbjct: 300 RLDITAYGVIISGLC-GNGK---LKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMK 355
Query: 382 KTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVI 441
+ + E GF + +++ + +N + E I+ +EK + + Y ++I
Sbjct: 356 AAVNMYHKLIERGFEPDVVALSTM--IDGIAKNGQLHEAIVYFCIEKAND---VMYTVLI 410
Query: 442 YAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCK 501
A C+ G E +R+ +++ + VPD Y +++A +A + M+++G
Sbjct: 411 DALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLL 470
Query: 502 PDQNTYNSIV 511
D Y +++
Sbjct: 471 LDLLAYTTLI 480
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 179/381 (46%), Gaps = 32/381 (8%)
Query: 11 APDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAM 69
+P++ T++T I C++G L + AL+ F +K L P++VT+ L+D Y K+ + A+
Sbjct: 160 SPNVVTYSTWIDTFCKSGEL-QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAV 218
Query: 70 EVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGF 129
+ K+M ++VTYT+LI + + G ++ A E+ ++MVE ++P+ YTT++ GF
Sbjct: 219 SLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGF 278
Query: 130 VNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDI 189
+ AM+ +M G + +I + +I G E ++ ++++ PD+
Sbjct: 279 FQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDM 338
Query: 190 VTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNT-------------------- 229
V + T++ + ++G ++ ++ GF P+ +T
Sbjct: 339 VIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCI 398
Query: 230 ----------LISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSE 279
LI A + G F + ++ ++ EAG+ PD Y + +A L + G +
Sbjct: 399 EKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAF 458
Query: 280 KVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVN 339
K+ + M + + Y++L++ A+ + + +E+ + I+ + + L+
Sbjct: 459 KLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAY 518
Query: 340 SKFDFLAEAEHAFLEFKKRGI 360
K +A A L+ ++RG+
Sbjct: 519 EKEGNMAAASDLLLDMQRRGL 539
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 155/331 (46%), Gaps = 32/331 (9%)
Query: 5 MKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
MK L+P++ TF LI C+AG L E A+ L++E++ + ++VTY AL+D + K
Sbjct: 189 MKRDALSPNVVTFTCLIDGYCKAGDL-EVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKG 247
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ A E+ +M P+ + YT++I + + G + A++ +M+ + ++ D+ Y
Sbjct: 248 EMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYG 307
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
++SG K + A + E+M + P++ F ++ Y G ++ ++
Sbjct: 308 VIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIER 367
Query: 184 QCSPDIVTWNTLLAVFGQNG----------------------LDS--------EVSGVFK 213
PD+V +T++ +NG +D+ EV +F
Sbjct: 368 GFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFS 427
Query: 214 EMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGG 273
++ AG VP++ + + I+ + G+ A + RM++ G+ DL Y ++ LA G
Sbjct: 428 KISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKG 487
Query: 274 LWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
L ++ +V EM N P+ + L+ AY
Sbjct: 488 LMVEARQVFDEMLNSGISPDSAVFDLLIRAY 518
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/422 (19%), Positives = 185/422 (43%), Gaps = 41/422 (9%)
Query: 99 LLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFN 158
++ EAL+ +++ + PD +T + +N+ L+++ + + G P+ +FN
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60
Query: 159 ALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRA 218
+++ G + + C PD++++N+L+ +NG S V + ++ +
Sbjct: 61 SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120
Query: 219 -GFV--PERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLW 275
GF+ P+ +FN+L + +S+ D+ VY ++ +P++ TY+ + + G
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEV-FVYMGVMLKCCSPNVVTYSTWIDTFCKSGEL 179
Query: 276 EQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTL 335
+ + K M+ PN VT++ L+ Y + E +L +E+ +++ + V L
Sbjct: 180 QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTAL 239
Query: 336 VLVNSKFDFLAEAEHAFLEF-KKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESG 394
+ K + AE + + R P+ + + + R ++ +KF
Sbjct: 240 IDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQR----GDSDNAMKF----- 290
Query: 395 FTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAK 454
L ++L +G+ D+ +Y ++I C NGK+ EA
Sbjct: 291 ---------------------------LAKMLNQGMRLDITAYGVIISGLCGNGKLKEAT 323
Query: 455 RILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWY 514
I+ +M+ VPD+V + T + Y + A+ + +I++G +PD ++++D
Sbjct: 324 EIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGI 383
Query: 515 CK 516
K
Sbjct: 384 AK 385
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 137/320 (42%), Gaps = 14/320 (4%)
Query: 219 GFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQS 278
G+ P R +FN+++S + G A + M G PD+ +YN+++ R G +
Sbjct: 51 GYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSA 110
Query: 279 EKVLSEMENGR---CKPNEVTYSSLLHAYANGKEFEKMNALAEE-IYSGKI----TTHAV 330
VL + CKP+ V+++SL + F KM L E +Y G + + + V
Sbjct: 111 SLVLESLRASHGFICKPDIVSFNSLFNG------FSKMKMLDEVFVYMGVMLKCCSPNVV 164
Query: 331 LLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFM 390
T + K L A +F K+ + ++ T ++ Y + + + K M
Sbjct: 165 TYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM 224
Query: 391 YESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKM 450
+L++ Y +L+ + +++E + ++E +EP+ + Y +I + + G
Sbjct: 225 RRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDS 284
Query: 451 TEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSI 510
A + L +M + D+ Y ++ N EA +V+ M K PD + ++
Sbjct: 285 DNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTM 344
Query: 511 VDWYCKLHLREEAYNFVHNL 530
++ Y K + A N H L
Sbjct: 345 MNAYFKSGRMKAAVNMYHKL 364
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 122/260 (46%), Gaps = 7/260 (2%)
Query: 2 LMDMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
L M +QG+ D+ + +IS C G L +EA E+ E+++ + L PDMV + +++ Y
Sbjct: 291 LAKMLNQGMRLDITAYGVIISGLCGNGKL-KEATEIVEDMEKSDLVPDMVIFTTMMNAYF 349
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
KS R K A+ + ++ RGF P +V +++I ++G L EA+ +EK DV
Sbjct: 350 KSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVY--FCIEK--ANDV- 404
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
YT L+ R+F ++ AG P+ + + I +G + K+ +
Sbjct: 405 MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRM 464
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
D++ + TL+ GL E VF EM +G P+ F+ LI AY + G+
Sbjct: 465 VQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNM 524
Query: 241 DQARAVYKRMLEAGVTPDLS 260
A + M G+ +S
Sbjct: 525 AAASDLLLDMQRRGLVTAVS 544
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 168/333 (50%), Gaps = 6/333 (1%)
Query: 44 GLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEA 103
G P++++Y AL++ YG+ + A + ++M+S G PS +TY ++ +V +EA
Sbjct: 176 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 235
Query: 104 LELKNQMVEKH---IKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNAL 160
E+ ++++ +KPD Y ++ + A E A +VF M G + T+N+L
Sbjct: 236 EEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL 295
Query: 161 IKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGF 220
+ + E+ K++ +++ PD+V++ L+ +G+ + E VF+EM AG
Sbjct: 296 MSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 352
Query: 221 VPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEK 280
P + +N L+ A++ G +QA+ V+K M + PDL +Y +L+A E +EK
Sbjct: 353 RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEK 412
Query: 281 VLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNS 340
++ +PN VTY +L+ YA + EKM + E++ I + +L T++ +
Sbjct: 413 FFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASG 472
Query: 341 KFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSL 373
+ A + E + G+P D N +LSL
Sbjct: 473 RCKNFGSALGWYKEMESCGVPPDQKAKNVLLSL 505
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 179/410 (43%), Gaps = 41/410 (10%)
Query: 50 VTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQ 109
+ + L+ YGK A VL + G P++++YT+L+ +Y R G A + +
Sbjct: 147 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 206
Query: 110 MVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEM---RTAGCKPNICTFNALIKMYGD 166
M +P TY +L FV K + A VFE + + + KP+ ++ +I MY
Sbjct: 207 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 266
Query: 167 RGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERET 226
G + + KVF + VT+N+L++ EVS ++ +M+R+ P+ +
Sbjct: 267 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSY---KEVSKIYDQMQRSDIQPDVVS 323
Query: 227 FNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEME 286
+ LI AY R ++A +V++ ML+AGV P YN +L A A G+ EQ++ V M
Sbjct: 324 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 383
Query: 287 NGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLA 346
R P+ +Y+++L AY N + E
Sbjct: 384 RDRIFPDLWSYTTMLSAYVNASDMEG---------------------------------- 409
Query: 347 EAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLM 406
AE F K G +I T ++ Y + V K ++ + M SG + ++M
Sbjct: 410 -AEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIM 468
Query: 407 YLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRI 456
R +NF + +E+ G+ PD + N+++ ++ EAK +
Sbjct: 469 DASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 132/240 (55%), Gaps = 3/240 (1%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M +G+ T+N+L+S + Y+E +++++++ + ++PD+V+Y L+ YG++RR
Sbjct: 280 MVGKGVPQSTVTYNSLMSFETS---YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARR 336
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+EA+ V ++M G P+ Y L+ A+ G++E+A + M I PD+++YTT
Sbjct: 337 EEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTT 396
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
+LS +VNA E A + F+ ++ G +PNI T+ LIK Y +M +V+++++
Sbjct: 397 MLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSG 456
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
+ T++ G+ G +KEM+ G P+++ N L+S S ++A+
Sbjct: 457 IKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAK 516
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 140/301 (46%), Gaps = 41/301 (13%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEI---KLAGLRPDMVTYNALLDVYGK 61
M+S G P T+ ++ G ++EA E+FE + K + L+PD Y+ ++ +Y K
Sbjct: 207 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 266
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYT 121
+ ++A +V M +G P S VTY SL+S + +E ++ +QM I+PDV +
Sbjct: 267 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVS 323
Query: 122 YTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGM-------FAEMG 174
Y L+ + A+++E A+ VFEEM AG +P +N L+ + GM F M
Sbjct: 324 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 383
Query: 175 ----------------------------KVFKEIKACQCSPDIVTWNTLLAVFGQNGLDS 206
K FK IK P+IVT+ TL+ + +
Sbjct: 384 RDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVE 443
Query: 207 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVL 266
++ V+++M+ +G + T++ A RC +F A YK M GV PD N +L
Sbjct: 444 KMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLL 503
Query: 267 A 267
+
Sbjct: 504 S 504
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 159/345 (46%), Gaps = 6/345 (1%)
Query: 9 GLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEA 68
G P++ ++ L+ G A +F ++ +G P +TY +L + + + KEA
Sbjct: 176 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 235
Query: 69 MEVLKQM-ESRGFP--PSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTL 125
EV + + + + P P Y +I Y + G E+A ++ + MV K + TY +L
Sbjct: 236 EEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL 295
Query: 126 LSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQC 185
+S F + K+ +++++M+ + +P++ ++ LIK YG E VF+E+
Sbjct: 296 MS-FETSYKE--VSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 352
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
P +N LL F +G+ + VFK M+R P+ ++ T++SAY + A
Sbjct: 353 RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEK 412
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA 305
+KR+ G P++ TY ++ A+ E+ +V +M K N+ ++++ A
Sbjct: 413 FFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASG 472
Query: 306 NGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEH 350
K F +E+ S + L+ + S D L EA+
Sbjct: 473 RCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKE 517
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/417 (20%), Positives = 176/417 (42%), Gaps = 42/417 (10%)
Query: 162 KMYGDRGMFAEM--GKV--FKEIKACQCSPDIVTWN--------------TLLAVFGQNG 203
K GD+G+ ++ G + FK++K +I+ W L+ +G+ G
Sbjct: 101 KTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLG 160
Query: 204 LDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYN 263
+ V + + G P ++ L+ +Y R G + A A+++RM +G P TY
Sbjct: 161 NFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQ 220
Query: 264 AVLAALARGGLWEQSEKVLSEMENGR---CKPNEVTYSSLLHAYANGKEFEKMNALAEEI 320
+L G ++++E+V + + + KP++ Y +++ Y +EK + +
Sbjct: 221 IILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSM 280
Query: 321 YSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLV 380
+ V +L+ + + E + + ++ I D+ + ++ YGR +
Sbjct: 281 VGKGVPQSTVTYNSLMSFETSY---KEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARRE 337
Query: 381 AKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIV 440
+ + + M ++G + YN L+ + + +++ + + + I PDL SY +
Sbjct: 338 EEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTM 397
Query: 441 IYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGC 500
+ AY M A++ +K P++VTY T + YA + + + V + M G
Sbjct: 398 LSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGI 457
Query: 501 KPDQNTYNSIVD-------------WY-----CKLHLREEAYNFVHNLSSLDLHVSE 539
K +Q +I+D WY C + ++A N + +L+S + E
Sbjct: 458 KANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEE 514
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 158/381 (41%), Gaps = 49/381 (12%)
Query: 138 AMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLA 197
A RV + G PN+ ++ AL++ YG G +F+ +++ P +T+ +L
Sbjct: 165 AERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILK 224
Query: 198 VFGQNGLDSEVSGVFKEM---KRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAG 254
F + E VF+ + K++ P+++ ++ +I Y + G++++AR V+ M+ G
Sbjct: 225 TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKG 284
Query: 255 VTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGK-EFEKM 313
V TYN++++ +++ K+ +M+ +P+ V+Y+ L+ AY + E E +
Sbjct: 285 VPQSTVTYNSLMSFETS---YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEAL 341
Query: 314 NALAEEIYSGKITTHA---VLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAM 370
+ E + +G TH +LL + + +A+ F ++ I D+ + M
Sbjct: 342 SVFEEMLDAGVRPTHKAYNILLDAFAISG----MVEQAKTVFKSMRRDRIFPDLWSYTTM 397
Query: 371 LSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGI 430
LS Y + +E + I G
Sbjct: 398 LSAY-----------------------------------VNASDMEGAEKFFKRIKVDGF 422
Query: 431 EPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIG 490
EP++++Y +I Y + + + + +M+ + T + FG A+G
Sbjct: 423 EPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALG 482
Query: 491 VVQCMIKQGCKPDQNTYNSIV 511
+ M G PDQ N ++
Sbjct: 483 WYKEMESCGVPPDQKAKNVLL 503
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/536 (22%), Positives = 229/536 (42%), Gaps = 52/536 (9%)
Query: 22 SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFP 81
S +A +Y+ +EL++ + PD++ N+LL + KSRR +A +V +M RG
Sbjct: 149 SLSKAVEIYDYVVELYDSV------PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRG-- 200
Query: 82 PSIVTYTS--LISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAM 139
S+ Y++ L+ +G +E +L K P++ Y T++ G+ E A
Sbjct: 201 DSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAY 260
Query: 140 RVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK------------------ 181
VF+E++ G P + TF +I + G F ++ E+K
Sbjct: 261 LVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAK 320
Query: 182 -----------------ACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPER 224
A C PD+ T+N L+ + G G E + G +P
Sbjct: 321 YRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNN 380
Query: 225 ETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSE 284
++ LI AY + +D A + +M E G PD+ TY ++ L G + + + +
Sbjct: 381 LSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVK 440
Query: 285 MENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLV---LVNSK 341
+ + P+ Y+ L+ F L E+ I A + TL+ + +
Sbjct: 441 LIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGD 500
Query: 342 FDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPG 401
FD EA F ++G+ D+ NAM+ + R ++ + + M E
Sbjct: 501 FD---EARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFT 557
Query: 402 YNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMK 461
Y++++ + + ++ + I R + + +P++++Y +I +C G A+ EM+
Sbjct: 558 YSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQ 617
Query: 462 DPAPVPDVVTYNTFVATYAA-NSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
VP+VVTY T + + A +S +A+ + M+ C P++ T+N ++ + K
Sbjct: 618 LRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVK 673
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/497 (23%), Positives = 212/497 (42%), Gaps = 54/497 (10%)
Query: 4 DMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLR---------------- 46
++K +G P L TF T+I+ C+ G + + L E+K GLR
Sbjct: 265 ELKLKGFMPTLETFGTMINGFCKEGD-FVASDRLLSEVKERGLRVSVWFLNNIIDAKYRH 323
Query: 47 -------------------PDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTY 87
PD+ TYN L++ K + + A+ L + +G P+ ++Y
Sbjct: 324 GYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSY 383
Query: 88 TSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRT 147
LI AY + + A +L QM E+ KPD+ TY L+ G V + + A+ + ++
Sbjct: 384 APLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLID 443
Query: 148 AGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSE 207
G P+ +N L+ G F +F E+ PD + TL+ F ++G E
Sbjct: 444 RGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDE 503
Query: 208 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLA 267
VF G + N +I + R G D+A A RM E + PD TY+ ++
Sbjct: 504 ARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIID 563
Query: 268 ALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITT 327
+ + K+ ME +CKPN VTY+SL++ + +F+ +E+ +
Sbjct: 564 GYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVP 623
Query: 328 HAVLLKTLVLVNSKFDFLAEAEHAFLEF--KKRGIPHDITTLNAMLSLYGRK---KLVAK 382
+ V TL+ +K E + E + +P+++ T N +L + +K K++A+
Sbjct: 624 NVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEV-TFNCLLQGFVKKTSGKVLAE 682
Query: 383 TN-----------KILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIE 431
+ + M G++ YNS + + + M ++++KG
Sbjct: 683 PDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFS 742
Query: 432 PDLISYNIVIYAYCRNG 448
PD +S+ +++ +C G
Sbjct: 743 PDPVSFAAILHGFCVVG 759
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/473 (23%), Positives = 217/473 (45%), Gaps = 38/473 (8%)
Query: 53 NALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVE 112
++ L + + R E +VL + + + + ++ AY G L +A+E+ + +VE
Sbjct: 103 SSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVE 162
Query: 113 KHIK-PDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFA 171
+ PDV +LLS V +++ A +V++EM G + + L+K + G
Sbjct: 163 LYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGK-V 221
Query: 172 EMGKVFKEIKACQ-CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTL 230
E+G+ E + + C P+IV +NT++ + + G VFKE+K GF+P ETF T+
Sbjct: 222 EVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTM 281
Query: 231 ISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRC 290
I+ + + G F + + + E G+ + N ++ A R G + + + C
Sbjct: 282 INGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDC 341
Query: 291 KPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEH 350
KP+ TY+ L++ KE +K A+ FL EA
Sbjct: 342 KPDVATYNILINRLC--KEGKKEVAVG--------------------------FLDEAS- 372
Query: 351 AFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHS 410
KK IP++++ ++ Y + K +K+L M E G + Y L++
Sbjct: 373 -----KKGLIPNNLS-YAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLV 426
Query: 411 RTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVV 470
+ + + + +++++G+ PD YN+++ C+ G+ AK + +EM D +PD
Sbjct: 427 VSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAY 486
Query: 471 TYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEA 523
Y T + + + F EA V +++G K D +N+++ +C+ + +EA
Sbjct: 487 VYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEA 539
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 117/274 (42%), Gaps = 9/274 (3%)
Query: 263 NAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYS 322
++ L LAR ++ + E VL + N K S +LHAYA K A EIY
Sbjct: 103 SSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSK----AVEIYD 158
Query: 323 GKITTH-----AVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRK 377
+ + + +L+ + K L +A + E RG D + ++ +
Sbjct: 159 YVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNE 218
Query: 378 KLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISY 437
V K+++ + G ++ YN+++ + + + + ++ +E+ KG P L ++
Sbjct: 219 GKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETF 278
Query: 438 NIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIK 497
+I +C+ G + R+L+E+K+ V N + + + + +I
Sbjct: 279 GTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIA 338
Query: 498 QGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLS 531
CKPD TYN +++ CK +E A F+ S
Sbjct: 339 NDCKPDVATYNILINRLCKEGKKEVAVGFLDEAS 372
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 168/333 (50%), Gaps = 6/333 (1%)
Query: 44 GLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEA 103
G P++++Y AL++ YG+ + A + ++M+S G PS +TY ++ +V +EA
Sbjct: 169 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 228
Query: 104 LELKNQMVEKH---IKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNAL 160
E+ ++++ +KPD Y ++ + A E A +VF M G + T+N+L
Sbjct: 229 EEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL 288
Query: 161 IKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGF 220
+ + E+ K++ +++ PD+V++ L+ +G+ + E VF+EM AG
Sbjct: 289 MSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 345
Query: 221 VPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEK 280
P + +N L+ A++ G +QA+ V+K M + PDL +Y +L+A E +EK
Sbjct: 346 RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEK 405
Query: 281 VLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNS 340
++ +PN VTY +L+ YA + EKM + E++ I + +L T++ +
Sbjct: 406 FFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASG 465
Query: 341 KFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSL 373
+ A + E + G+P D N +LSL
Sbjct: 466 RCKNFGSALGWYKEMESCGVPPDQKAKNVLLSL 498
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 179/410 (43%), Gaps = 41/410 (10%)
Query: 50 VTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQ 109
+ + L+ YGK A VL + G P++++YT+L+ +Y R G A + +
Sbjct: 140 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 199
Query: 110 MVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEM---RTAGCKPNICTFNALIKMYGD 166
M +P TY +L FV K + A VFE + + + KP+ ++ +I MY
Sbjct: 200 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 259
Query: 167 RGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERET 226
G + + KVF + VT+N+L++ EVS ++ +M+R+ P+ +
Sbjct: 260 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSY---KEVSKIYDQMQRSDIQPDVVS 316
Query: 227 FNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEME 286
+ LI AY R ++A +V++ ML+AGV P YN +L A A G+ EQ++ V M
Sbjct: 317 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 376
Query: 287 NGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLA 346
R P+ +Y+++L AY N + E
Sbjct: 377 RDRIFPDLWSYTTMLSAYVNASDMEG---------------------------------- 402
Query: 347 EAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLM 406
AE F K G +I T ++ Y + V K ++ + M SG + ++M
Sbjct: 403 -AEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIM 461
Query: 407 YLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRI 456
R +NF + +E+ G+ PD + N+++ ++ EAK +
Sbjct: 462 DASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 132/240 (55%), Gaps = 3/240 (1%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M +G+ T+N+L+S + Y+E +++++++ + ++PD+V+Y L+ YG++RR
Sbjct: 273 MVGKGVPQSTVTYNSLMSFETS---YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARR 329
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+EA+ V ++M G P+ Y L+ A+ G++E+A + M I PD+++YTT
Sbjct: 330 EEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTT 389
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
+LS +VNA E A + F+ ++ G +PNI T+ LIK Y +M +V+++++
Sbjct: 390 MLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSG 449
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
+ T++ G+ G +KEM+ G P+++ N L+S S ++A+
Sbjct: 450 IKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAK 509
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 140/301 (46%), Gaps = 41/301 (13%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEI---KLAGLRPDMVTYNALLDVYGK 61
M+S G P T+ ++ G ++EA E+FE + K + L+PD Y+ ++ +Y K
Sbjct: 200 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 259
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYT 121
+ ++A +V M +G P S VTY SL+S + +E ++ +QM I+PDV +
Sbjct: 260 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVS 316
Query: 122 YTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGM-------FAEMG 174
Y L+ + A+++E A+ VFEEM AG +P +N L+ + GM F M
Sbjct: 317 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 376
Query: 175 ----------------------------KVFKEIKACQCSPDIVTWNTLLAVFGQNGLDS 206
K FK IK P+IVT+ TL+ + +
Sbjct: 377 RDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVE 436
Query: 207 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVL 266
++ V+++M+ +G + T++ A RC +F A YK M GV PD N +L
Sbjct: 437 KMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLL 496
Query: 267 A 267
+
Sbjct: 497 S 497
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 159/345 (46%), Gaps = 6/345 (1%)
Query: 9 GLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEA 68
G P++ ++ L+ G A +F ++ +G P +TY +L + + + KEA
Sbjct: 169 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 228
Query: 69 MEVLKQM-ESRGFP--PSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTL 125
EV + + + + P P Y +I Y + G E+A ++ + MV K + TY +L
Sbjct: 229 EEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL 288
Query: 126 LSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQC 185
+S F + K+ +++++M+ + +P++ ++ LIK YG E VF+E+
Sbjct: 289 MS-FETSYKE--VSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 345
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
P +N LL F +G+ + VFK M+R P+ ++ T++SAY + A
Sbjct: 346 RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEK 405
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA 305
+KR+ G P++ TY ++ A+ E+ +V +M K N+ ++++ A
Sbjct: 406 FFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASG 465
Query: 306 NGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEH 350
K F +E+ S + L+ + S D L EA+
Sbjct: 466 RCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKE 510
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/417 (20%), Positives = 176/417 (42%), Gaps = 42/417 (10%)
Query: 162 KMYGDRGMFAEM--GKV--FKEIKACQCSPDIVTWN--------------TLLAVFGQNG 203
K GD+G+ ++ G + FK++K +I+ W L+ +G+ G
Sbjct: 94 KTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLG 153
Query: 204 LDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYN 263
+ V + + G P ++ L+ +Y R G + A A+++RM +G P TY
Sbjct: 154 NFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQ 213
Query: 264 AVLAALARGGLWEQSEKVLSEMENGR---CKPNEVTYSSLLHAYANGKEFEKMNALAEEI 320
+L G ++++E+V + + + KP++ Y +++ Y +EK + +
Sbjct: 214 IILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSM 273
Query: 321 YSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLV 380
+ V +L+ + + E + + ++ I D+ + ++ YGR +
Sbjct: 274 VGKGVPQSTVTYNSLMSFETSY---KEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARRE 330
Query: 381 AKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIV 440
+ + + M ++G + YN L+ + + +++ + + + I PDL SY +
Sbjct: 331 EEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTM 390
Query: 441 IYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGC 500
+ AY M A++ +K P++VTY T + YA + + + V + M G
Sbjct: 391 LSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGI 450
Query: 501 KPDQNTYNSIVD-------------WY-----CKLHLREEAYNFVHNLSSLDLHVSE 539
K +Q +I+D WY C + ++A N + +L+S + E
Sbjct: 451 KANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEE 507
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/393 (20%), Positives = 161/393 (40%), Gaps = 49/393 (12%)
Query: 138 AMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLA 197
A RV + G PN+ ++ AL++ YG G +F+ +++ P +T+ +L
Sbjct: 158 AERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILK 217
Query: 198 VFGQNGLDSEVSGVFKEM---KRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAG 254
F + E VF+ + K++ P+++ ++ +I Y + G++++AR V+ M+ G
Sbjct: 218 TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKG 277
Query: 255 VTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGK-EFEKM 313
V TYN++++ +++ K+ +M+ +P+ V+Y+ L+ AY + E E +
Sbjct: 278 VPQSTVTYNSLMSFETS---YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEAL 334
Query: 314 NALAEEIYSGKITTHA---VLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAM 370
+ E + +G TH +LL + + +A+ F ++ I D+ + M
Sbjct: 335 SVFEEMLDAGVRPTHKAYNILLDAFAISG----MVEQAKTVFKSMRRDRIFPDLWSYTTM 390
Query: 371 LSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGI 430
LS Y + +E + I G
Sbjct: 391 LSAY-----------------------------------VNASDMEGAEKFFKRIKVDGF 415
Query: 431 EPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIG 490
EP++++Y +I Y + + + + +M+ + T + FG A+G
Sbjct: 416 EPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALG 475
Query: 491 VVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEA 523
+ M G PDQ N ++ EEA
Sbjct: 476 WYKEMESCGVPPDQKAKNVLLSLASTQDELEEA 508
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/498 (23%), Positives = 214/498 (42%), Gaps = 51/498 (10%)
Query: 31 EEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSL 90
E A L E++ G+ + Y+ ++D Y K+ + V K+++ GF P++VTY L
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490
Query: 91 ISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
I+ Y + G + +ALE+ M E+ +K ++ TY+ +++GFV K A VFE+M G
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM 550
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVF-GQNGLDSEVS 209
KP D++ +N +++ F G +D +
Sbjct: 551 KP-----------------------------------DVILYNNIISAFCGMGNMDRAIQ 575
Query: 210 GVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAAL 269
V KEM++ P TF +I Y++ G ++ V+ M G P + T+N ++ L
Sbjct: 576 TV-KEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGL 634
Query: 270 ARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYAN----GKEFEKMNALAEEIYSGKI 325
E++ ++L EM NE TY+ ++ YA+ GK FE L E I
Sbjct: 635 VEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDI 694
Query: 326 TTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNK 385
T+ LLK LA + E R IP + N ++ + R+ V +
Sbjct: 695 FTYEALLKACCKSGRMQSALAVTK----EMSARNIPRNSFVYNILIDGWARRGDVWEAAD 750
Query: 386 ILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYC 445
+++ M + G + Y S + S+ + ++ + E+ G++P++ +Y +I +
Sbjct: 751 LIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWA 810
Query: 446 RNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEA------IGVVQCMIKQG 499
R +A EMK PD Y+ + + + + EA + + + M++ G
Sbjct: 811 RASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAG 870
Query: 500 CKPDQNTYNSIVDWYCKL 517
D T CK+
Sbjct: 871 LIVDMGTAVHWSKCLCKI 888
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 121/550 (22%), Positives = 241/550 (43%), Gaps = 51/550 (9%)
Query: 27 GSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVT 86
G ++ + FE+I +P + ++ YG+ A E ++M +RG P+
Sbjct: 291 GDNWQAVISAFEKIS----KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRI 346
Query: 87 YTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMR 146
YTSLI AY ++EAL +M E+ I+ + TY+ ++ GF A E A F+E +
Sbjct: 347 YTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAK 406
Query: 147 T---------------AGCKP-NICTFNALIKMYGDRG----------------MFAEMG 174
A C+ N+ AL++ + G M A+
Sbjct: 407 RIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEK 466
Query: 175 K---VFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLI 231
K VFK +K C +P +VT+ L+ ++ + G S+ V + MK G +T++ +I
Sbjct: 467 KGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMI 526
Query: 232 SAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCK 291
+ + + + A AV++ M++ G+ PD+ YN +++A G +++ + + EM+ R +
Sbjct: 527 NGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHR 586
Query: 292 PNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAE---- 347
P T+ ++H YA + + + E++ + + T+ N + L E
Sbjct: 587 PTTRTFMPIIHGYAKSGDMRR----SLEVFD--MMRRCGCVPTVHTFNGLINGLVEKRQM 640
Query: 348 --AEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSL 405
A E G+ + T ++ Y K + + G + + Y +L
Sbjct: 641 EKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEAL 700
Query: 406 MYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAP 465
+ ++ + + + +E+ + I + YNI+I + R G + EA ++ +MK
Sbjct: 701 LKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGV 760
Query: 466 VPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYN 525
PD+ TY +F++ + A ++ M G KP+ TY +++ + + L E+A +
Sbjct: 761 KPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALS 820
Query: 526 FVHNLSSLDL 535
+ ++ +
Sbjct: 821 CYEEMKAMGI 830
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/507 (21%), Positives = 230/507 (45%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M+++G+ P + +LI G +EAL ++K G+ +VTY+ ++ + K+
Sbjct: 335 MRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGH 394
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+ A + + + Y +I A+ + +E A L +M E+ I + Y T
Sbjct: 395 AEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHT 454
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
++ G+ ++ + VF+ ++ G P + T+ LI +Y G ++ +V + +K
Sbjct: 455 MMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEG 514
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
++ T++ ++ F + + VF++M + G P+ +N +ISA+ G+ D+A
Sbjct: 515 VKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAI 574
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
K M + P T+ ++ A+ G +S +V M C P T++ L++
Sbjct: 575 QTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGL 634
Query: 305 ANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDI 364
++ EK + +E+ ++ + ++ + +A F + G+ DI
Sbjct: 635 VEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDI 694
Query: 365 TTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILRE 424
T A+L + + + K M + YN L+ +R + ++ ++++
Sbjct: 695 FTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQ 754
Query: 425 ILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSM 484
+ ++G++PD+ +Y I A + G M A + + EM+ P++ TY T + +A S+
Sbjct: 755 MKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASL 814
Query: 485 FGEAIGVVQCMIKQGCKPDQNTYNSIV 511
+A+ + M G KPD+ Y+ ++
Sbjct: 815 PEKALSCYEEMKAMGIKPDKAVYHCLL 841
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 167/338 (49%), Gaps = 9/338 (2%)
Query: 4 DMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
DM +G+ PD+ +N +IS C G++ + A++ +E++ RP T+ ++ Y KS
Sbjct: 544 DMVKEGMKPDVILYNNIISAFCGMGNM-DRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 602
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
+ ++EV M G P++ T+ LI+ V +E+A+E+ ++M + + +TY
Sbjct: 603 GDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTY 662
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
T ++ G+ + A F ++ G +I T+ AL+K G V KE+ A
Sbjct: 663 TKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSA 722
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
+ +N L+ + + G E + + ++MK+ G P+ T+ + ISA S+ G ++
Sbjct: 723 RNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNR 782
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
A + M GV P++ TY ++ AR L E++ EM+ KP++ Y LL
Sbjct: 783 ATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLT 842
Query: 303 AYANGKEFEKMNALAEE-IYSGKITTHAVLLKTLVLVN 339
+ + ++AE IYSG +T +++ ++V+
Sbjct: 843 SLLS------RASIAEAYIYSGVMTICKEMVEAGLIVD 874
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 195/453 (43%), Gaps = 35/453 (7%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
++ +M+ +G+ + ++T++ + ++ L +F+ +K G P +VTY L+++Y
Sbjct: 436 LVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYT 495
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K + +A+EV + M+ G ++ TY+ +I+ +V+ A + MV++ +KPDV
Sbjct: 496 KVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVI 555
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
Y ++S F + A++ +EM+ +P TF +I Y G +VF +
Sbjct: 556 LYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMM 615
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ C C P + T+N L+ + + + EM AG T+ ++ Y+ G
Sbjct: 616 RRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDT 675
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
+A + R+ G+ D+ TY A+L A + G + + V EM N Y+ L
Sbjct: 676 GKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNIL 735
Query: 301 LHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI 360
+ +A G + A L++ + KK G+
Sbjct: 736 IDGWAR---------------RGDVWEAADLIQ--------------------QMKKEGV 760
Query: 361 PHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEM 420
DI T + +S + + + + ++ M G ++ Y +L+ +R K+
Sbjct: 761 KPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALS 820
Query: 421 ILREILEKGIEPDLISYNIVIYAYCRNGKMTEA 453
E+ GI+PD Y+ ++ + + EA
Sbjct: 821 CYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEA 853
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/367 (19%), Positives = 166/367 (45%), Gaps = 6/367 (1%)
Query: 187 PDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAV 246
P + ++ +G+ G F+ M+ G P + +LI AY+ D+A +
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 247 YKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYAN 306
++M E G+ L TY+ ++ ++ G E ++ E + N Y +++A+
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQ 426
Query: 307 GKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKR---GIPHD 363
E+ AL E+ I + T++ + +A+ + + FK+ G
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMM---DGYTMVADEKKGLVVFKRLKECGFTPT 483
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILR 423
+ T +++LY + ++K ++ + M E G +L Y+ ++ + +++ + +
Sbjct: 484 VVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFE 543
Query: 424 EILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANS 483
+++++G++PD+I YN +I A+C G M A + + EM+ P T+ + YA +
Sbjct: 544 DMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSG 603
Query: 484 MFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEKG 543
++ V M + GC P +T+N +++ + E+A + ++ + +E
Sbjct: 604 DMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYT 663
Query: 544 RLLERIA 550
++++ A
Sbjct: 664 KIMQGYA 670
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
++ MK +G+ PD+ T+ + IS C A + EE++ G++P++ TY L+ +
Sbjct: 751 LIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWA 810
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEA------LELKNQMVEKH 114
++ P++A+ ++M++ G P Y L+++ + + EA + + +MVE
Sbjct: 811 RASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAG 870
Query: 115 IKPDVYT 121
+ D+ T
Sbjct: 871 LIVDMGT 877
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 193/414 (46%), Gaps = 12/414 (2%)
Query: 5 MKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M+ G++ DL +F LI C CR L AL + ++ G P +VT+ +LL +
Sbjct: 97 MELYGISHDLYSFTILIHCFCRCSRL-SFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVN 155
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
R +A ++ M G+ P++V Y +LI ++G L ALEL N+M +K + DV TY
Sbjct: 156 RIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYN 215
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
TLL+G + + A R+ +M P++ TF ALI ++ +G E +++KE+
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
P+ VT+N+++ +G + F M G P T+NTLIS + + D+
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEG 335
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
+++RM G D+ TYN ++ + G + + M + R P+ +T+ LLH
Sbjct: 336 MKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG 395
Query: 304 YANGKEFE----KMNALAE-EIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKR 358
E E K + + E E Y G I + +++ L K D + +A F
Sbjct: 396 LCVNGEIESALVKFDDMRESEKYIG-IVAYNIMIHGL----CKADKVEKAWELFCRLPVE 450
Query: 359 GIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRT 412
G+ D T M+ + + +++++ M E G + + + HS +
Sbjct: 451 GVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSSS 504
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 210/448 (46%), Gaps = 22/448 (4%)
Query: 30 YEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTS 89
+E+A LF E+ + P +V + LL RR + + ++ME G + ++T
Sbjct: 52 FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111
Query: 90 LISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGF--VNAKKDELAMRVFEEMRT 147
LI + R L AL + +M++ +P + T+ +LL GF VN D ++ + M
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVIL--MVK 169
Query: 148 AGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSE 207
+G +PN+ +N LI G ++ E++ D+VT+NTLL +G S+
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 208 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLA 267
+ + ++M + P+ TF LI + + G+ D+A+ +YK M+++ V P+ TYN+++
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 268 ALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA-------NGKEFEKMNALAEEI 320
L G ++K M + C PN VTY++L+ + K F++M+ E
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC---EG 346
Query: 321 YSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLV 380
++ I T+ L+ V L A F R + DI T + L+G
Sbjct: 347 FNADIFTYNTLIHGYCQVGK----LRVALDIFCWMVSRRVTPDIIT--HCILLHGLCVNG 400
Query: 381 AKTNKILKF--MYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYN 438
+ ++KF M ES + + YN +++ + K+ + + +G++PD +Y
Sbjct: 401 EIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYT 460
Query: 439 IVIYAYCRNGKMTEAKRILNEMKDPAPV 466
I+I C+NG EA ++ MK+ +
Sbjct: 461 IMILGLCKNGPRREADELIRRMKEEGII 488
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/472 (22%), Positives = 211/472 (44%), Gaps = 41/472 (8%)
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYT 121
S R ++A + +M PSIV +T L++A E + +M I D+Y+
Sbjct: 49 SIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYS 108
Query: 122 YTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK 181
+T L+ F + A+ V +M G +P+I TF +L+ + + +G F +
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFC---LVNRIGDAFSLVI 165
Query: 182 ACQCS---PDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 238
S P++V +NTL+ +NG + + EM++ G + T+NTL++ G
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG 225
Query: 239 SFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYS 298
+ A + + M++ + PD+ T+ A++ + G ++++++ EM PN VTY+
Sbjct: 226 RWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYN 285
Query: 299 SLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKR 358
S+++ + +Y K T FD +A +
Sbjct: 286 SIINGLC----------MHGRLYDAKKT---------------FDLMAS----------K 310
Query: 359 GIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKS 418
G ++ T N ++S + + ++V + K+ + M GF + YN+L++ + + R +
Sbjct: 311 GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVA 370
Query: 419 EMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVAT 478
I ++ + + PD+I++ I+++ C NG++ A ++M++ +V YN +
Sbjct: 371 LDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHG 430
Query: 479 YAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
+A + + +G KPD TY ++ CK R EA + +
Sbjct: 431 LCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRM 482
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 144/287 (50%), Gaps = 2/287 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L +M+ +GL D+ T+NTL++ C +G + +A + ++ + PD+VT+ AL+DV+
Sbjct: 198 LLNEMEKKGLGADVVTYNTLLTGLCYSGR-WSDAARMLRDMMKRSINPDVVTFTALIDVF 256
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
K EA E+ K+M P+ VTY S+I+ G L +A + + M K P+V
Sbjct: 257 VKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNV 316
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TY TL+SGF + + M++F+ M G +I T+N LI Y G +F
Sbjct: 317 VTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCW 376
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+ + + +PDI+T LL NG F +M+ + +N +I +
Sbjct: 377 MVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADK 436
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEME 286
++A ++ R+ GV PD TY ++ L + G ++++++ M+
Sbjct: 437 VEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMK 483
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 137/326 (42%), Gaps = 43/326 (13%)
Query: 210 GVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAAL 269
+F EM + +P F L++A + ++ ++M G++ DL ++ ++
Sbjct: 57 ALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCF 116
Query: 270 ARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA----NGKEFEKMNALAEEIYSGKI 325
R + VL +M +P+ VT+ SLLH + G F + + + Y +
Sbjct: 117 CRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNV 176
Query: 326 TTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNK 385
+ L+ L N + + E + E +K+G+ D+ T N +L+
Sbjct: 177 VVYNTLIDGLC-KNGELNIALELLN---EMEKKGLGADVVTYNTLLT------------- 219
Query: 386 ILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYC 445
L Y + + + +LR+++++ I PD++++ +I +
Sbjct: 220 ------------------GLCY----SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFV 257
Query: 446 RNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQN 505
+ G + EA+ + EM + P+ VTYN+ + + +A M +GC P+
Sbjct: 258 KQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVV 317
Query: 506 TYNSIVDWYCKLHLREEAYNFVHNLS 531
TYN+++ +CK + +E +S
Sbjct: 318 TYNTLISGFCKFRMVDEGMKLFQRMS 343
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 136/565 (24%), Positives = 245/565 (43%), Gaps = 56/565 (9%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
++ +G D ++ I G +AL E+ G+ D+V+Y+ L+D K
Sbjct: 233 LEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGN 292
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+EA+ +L +M G P+++TYT++I + G LEEA L N+++ I+ D + Y T
Sbjct: 293 VEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVT 352
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA-- 182
L+ G A + +M G +P+I T+N +I G +E +V K +
Sbjct: 353 LIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDV 412
Query: 183 ----------------------------CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKE 214
+ D+V N LL F G E +++
Sbjct: 413 ITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRA 472
Query: 215 MKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGL 274
M P+ T+ T+I Y + G ++A ++ + ++ V+ + YN ++ AL + G+
Sbjct: 473 MPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALCKKGM 531
Query: 275 WEQSEKVLSEMENGRCKPNEVTYSSLLHA-YANGKEFEKMNALAEEIYSGKITTHAVLLK 333
+ + +VL E+ + T +LLH+ +ANG + + +Y + V L
Sbjct: 532 LDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGD----KGILGLVYGLEQLNSDVCLG 587
Query: 334 TL---VLVNSKFDFLAEAEHAFLEFKKRGI----PHDI--TTLNAMLSLYGRKKLVAKTN 384
L +L+ K A ++ +++G+ P I T ++ + SL +V
Sbjct: 588 MLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGE 647
Query: 385 KILKFMYESGFTLSLPGYNSLMYLHSRTR--NFRKSEMILREILEKGIEPDLISYNIVIY 442
L M +T+ + G +L +F KS +G+ + I+YN +I
Sbjct: 648 TTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKS---------RGVTLNTITYNSLIN 698
Query: 443 AYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKP 502
C+ G + EA R+ + +++ VP VTY + +F +A ++ M+ +G P
Sbjct: 699 GLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVP 758
Query: 503 DQNTYNSIVDWYCKLHLREEAYNFV 527
+ YNSIVD YCKL E+A V
Sbjct: 759 NIIIYNSIVDGYCKLGQTEDAMRVV 783
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 129/567 (22%), Positives = 243/567 (42%), Gaps = 46/567 (8%)
Query: 1 MLMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L M +G+ P+L T+ +I C+ G L EEA LF I G+ D Y L+D
Sbjct: 299 LLGKMIKEGVEPNLITYTAIIRGLCKMGKL-EEAFVLFNRILSVGIEVDEFLYVTLIDGI 357
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
+ A +L ME RG PSI+TY ++I+ G + EA E V K + DV
Sbjct: 358 CRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADE-----VSKGVVGDV 412
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TY+TLL ++ + + + + A ++ N L+K + G + E +++
Sbjct: 413 ITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRA 472
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+ +PD T+ T++ + + G E +F E++++ V +N +I A + G
Sbjct: 473 MPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSS-VSAAVCYNRIIDALCKKGM 531
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAAL-ARGG----------LWEQSEKVLSEMENG 288
D A V + E G+ D+ T +L ++ A GG L + + V M N
Sbjct: 532 LDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLND 591
Query: 289 ---------------------RCKPNEVTY-SSLLHAYANGKEFEKMNALAEEIYSGKIT 326
R K VT+ S++L + ++A + +G+ T
Sbjct: 592 AILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVD--NLRSLDAYLLVVNAGETT 649
Query: 327 THAV-LLKTLVLVNS--KFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKT 383
++ ++ +++N K FL +A + K RG+ + T N++++ ++ + +
Sbjct: 650 LSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEA 709
Query: 384 NKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYA 443
++ + G S Y L+ + F +E +L ++ KG+ P++I YN ++
Sbjct: 710 LRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDG 769
Query: 444 YCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPD 503
YC+ G+ +A R+++ PD T ++ + Y EA+ V + D
Sbjct: 770 YCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISAD 829
Query: 504 QNTYNSIVDWYCKLHLREEAYNFVHNL 530
+ ++ +C EEA + +
Sbjct: 830 FFGFLFLIKGFCTKGRMEEARGLLREM 856
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 121/551 (21%), Positives = 241/551 (43%), Gaps = 19/551 (3%)
Query: 10 LAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEA 68
L P+L T+ TL+S C+ G + +E +L ++ G D V Y+ + Y K +A
Sbjct: 203 LVPNLVTYTTLVSALCQLGKV-DEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDA 261
Query: 69 MEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSG 128
+ ++M +G +V+Y+ LI ++G +EEAL L +M+++ ++P++ TYT ++ G
Sbjct: 262 LMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRG 321
Query: 129 FVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPD 188
K E A +F + + G + + + LI +G + +++ P
Sbjct: 322 LCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPS 381
Query: 189 IVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYK 248
I+T+NT++ G SE V K G V + T++TL+ +Y + + D + +
Sbjct: 382 ILTYNTVINGLCMAGRVSEADEVSK-----GVVGDVITYSTLLDSYIKVQNIDAVLEIRR 436
Query: 249 RMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGK 308
R LEA + DL N +L A G + +++ + M P+ TY++++ Y
Sbjct: 437 RFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTG 496
Query: 309 EFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLN 368
+ E+ + E+ ++ AV ++ K L A +E ++G+ DI T
Sbjct: 497 QIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSR 555
Query: 369 AML-SLYGRKKLVAKTNKILKFMY---ESGFTLSLPGYNSLMYLHSRTRNFRKSEMILRE 424
+L S++ IL +Y + + L N + L + +F + +
Sbjct: 556 TLLHSIHAN----GGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMI 611
Query: 425 ILEKGIEPDLISYNIVIYAYCRNGKMTEAKR-ILNEMKDPAPVPDVVTYNTFVATYAANS 483
+ KG+ S ++ N + +A ++N + DV+ Y +
Sbjct: 612 MRRKGLTVTFPS--TILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEG 669
Query: 484 MFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEKG 543
+A+ + +G + TYNS+++ C+ EA +L ++ L SE G
Sbjct: 670 FLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYG 729
Query: 544 RLLERIAEKWI 554
L++ + ++ +
Sbjct: 730 ILIDNLCKEGL 740
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/517 (23%), Positives = 213/517 (41%), Gaps = 49/517 (9%)
Query: 1 MLMDMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
ML DM+ +G+ P + T+NT+I+ C AG + E +E+ G+ D++TY+ LLD Y
Sbjct: 369 MLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA-----DEVS-KGVVGDVITYSTLLDSY 422
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
K + +E+ ++ P +V L+ A++ G EA L M E + PD
Sbjct: 423 IKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDT 482
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TY T++ G+ + E A+ +F E+R + +C +N +I +GM +V E
Sbjct: 483 ATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVC-YNRIIDALCKKGMLDTATEVLIE 541
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+ DI T TLL NG D + G+ +++ N I + GS
Sbjct: 542 LWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGS 601
Query: 240 FDQARAVYKRMLEAGVT------------PDLSTYNAVLAALARGGLWEQSEKVLSEME- 286
F+ A VY M G+T +L + +A L + G E LS M+
Sbjct: 602 FEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAG------ETTLSSMDV 655
Query: 287 -------NGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVN 339
NG CK + + L ++A + +T + + +L+
Sbjct: 656 IDYTIIINGLCKEGFLVKALNLCSFAKSR---------------GVTLNTITYNSLINGL 700
Query: 340 SKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSL 399
+ L EA F + G+ T ++ ++ L K+L M G ++
Sbjct: 701 CQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNI 760
Query: 400 PGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNE 459
YNS++ + + + ++ + + PD + + +I YC+ G M EA + E
Sbjct: 761 IIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTE 820
Query: 460 MKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMI 496
KD D + + + EA G+++ M+
Sbjct: 821 FKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML 857
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 121/518 (23%), Positives = 221/518 (42%), Gaps = 49/518 (9%)
Query: 30 YEEALELFE-EIKLAGLRPDMVTYNALLDVYGKSRR-PKEAMEVLKQ-MESRGFPPSIVT 86
YE+A + I A + P ++L+ + +R P + + +L+ + + G PS +T
Sbjct: 77 YEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLT 136
Query: 87 YTSLISAYVRDGLLEEALELKNQMVEKHIK-P-DVYTYTTLLSGFVNAKKDELAMRVFEE 144
+ SLI +V G ++ A+E+ M K++ P D + + ++SGF K ELA+ FE
Sbjct: 137 FCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFES 196
Query: 145 MRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGL 204
+G P++VT+ TL++ Q G
Sbjct: 197 AVDSGV----------------------------------LVPNLVTYTTLVSALCQLGK 222
Query: 205 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNA 264
EV + + ++ GF + ++ I Y + G+ A + M+E G+ D+ +Y+
Sbjct: 223 VDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSI 282
Query: 265 VLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGK 324
++ L++ G E++ +L +M +PN +TY++++ + E+ L I S
Sbjct: 283 LIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVG 342
Query: 325 ITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTN 384
I L TL+ + L A + ++RGI I T N +++ V++ +
Sbjct: 343 IEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEAD 402
Query: 385 KILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAY 444
++ K G + Y++L+ + + +N I R LE I DL+ NI++ A+
Sbjct: 403 EVSK-----GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAF 457
Query: 445 CRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQ 504
G EA + M + PD TY T + Y EA+ + + K
Sbjct: 458 LLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-A 516
Query: 505 NTYNSIVDWYCKLHLREEAYNFVHNLSS----LDLHVS 538
YN I+D CK + + A + L LD+H S
Sbjct: 517 VCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTS 554
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 143/304 (47%), Gaps = 32/304 (10%)
Query: 6 KSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
KS+G+ + T+N+LI+ C+ G L E AL LF+ ++ GL P VTY L+D K
Sbjct: 682 KSRGVTLNTITYNSLINGLCQQGCLVE-ALRLFDSLENIGLVPSEVTYGILIDNLCKEGL 740
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+A ++L M S+G P+I+ Y S++ Y + G E+A+ + ++ + + PD +T ++
Sbjct: 741 FLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSS 800
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
++ G+ E A+ VF E + + F LIK + +G E + +E+ +
Sbjct: 801 MIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSE 860
Query: 185 CSPDIVTWNTLLAVFGQNGLDSE------VSGVFKEMKRAGFVPE-----RETFNTLISA 233
++ N +D+E + G E+ G VP+ E +T+ +
Sbjct: 861 SVVKLI-----------NRVDAELAESESIRGFLVELCEQGRVPQAIKILDEISSTIYPS 909
Query: 234 YSRCGSFDQARAVY----KRMLEAGVTPDLSTYNAVLAALARGGLWEQS-EKVLSEMENG 288
GS+ + + + + + + D + ++ +++L G EQ+ E V+S +
Sbjct: 910 GKNLGSYQRLQFLNDVNEEEIKKKDYVHDFHSLHSTVSSLCTSGKLEQANEFVMSVLS-- 967
Query: 289 RCKP 292
C P
Sbjct: 968 -CMP 970
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 101/471 (21%), Positives = 184/471 (39%), Gaps = 44/471 (9%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L+++ +GL D+ T TL+ A + L L ++ + N + +
Sbjct: 538 VLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLC 597
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGL--LEEALELKNQMVEKHIKPD 118
K + A+EV M +G VT+ S I + D L L+ L + N D
Sbjct: 598 KRGSFEAAIEVYMIMRRKGLT---VTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMD 654
Query: 119 VYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFK 178
V YT +++G A+ + ++ G N T+N+LI +G E ++F
Sbjct: 655 VIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFD 714
Query: 179 EIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 238
++ P VT+ L+ + GL + + M G VP +N+++ Y + G
Sbjct: 715 SLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLG 774
Query: 239 SFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYS 298
+ A V R + VTPD T ++++ + G E++ V +E ++ + +
Sbjct: 775 QTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFL 834
Query: 299 SLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAE--HAFL-EF 355
L+ + E+ L E+ + + L+N LAE+E FL E
Sbjct: 835 FLIKGFCTKGRMEEARGLLREMLVSE--------SVVKLINRVDAELAESESIRGFLVEL 886
Query: 356 KKRG-IPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRN 414
++G +P I L+ + S +Y SG L Y L +L+
Sbjct: 887 CEQGRVPQAIKILDEISST----------------IYPSGKNLG--SYQRLQFLNDVNE- 927
Query: 415 FRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAP 465
EI +K D S + + + C +GK+ +A + + P
Sbjct: 928 --------EEIKKKDYVHDFHSLHSTVSSLCTSGKLEQANEFVMSVLSCMP 970
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 151/358 (42%), Gaps = 20/358 (5%)
Query: 209 SGVF--KEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVL 266
SG+F + + ++GF P + + + R F+ Y ++ + + Y+ V
Sbjct: 9 SGLFSLQSLLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYSIVS 68
Query: 267 AALARGGLWEQSEKVLS-EMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKI 325
A +E +EK ++ + P SL+H ++ ++ L I +
Sbjct: 69 WAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLL---ILRDCL 125
Query: 326 TTHAVLLKTLVLVNSKFDFLAEAEH-------AFLEFKKRGIPHDITTLNAMLSLYGRKK 378
H +L + + F+ + E + K P D +A++S + +
Sbjct: 126 RNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCK-- 183
Query: 379 LVAKTNKILKFM---YESGFTL-SLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDL 434
+ K L F +SG + +L Y +L+ + + ++R + ++G E D
Sbjct: 184 -IGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDC 242
Query: 435 ISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQC 494
+ Y+ I+ Y + G + +A EM + DVV+Y+ + + EA+G++
Sbjct: 243 VFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGK 302
Query: 495 MIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEKGRLLERIAEK 552
MIK+G +P+ TY +I+ CK+ EEA+ + + S+ + V E L++ I K
Sbjct: 303 MIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRK 360
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/525 (22%), Positives = 232/525 (44%), Gaps = 15/525 (2%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M +G P + N ++ R + +A ++E + G+ P ++T+N +LD K+
Sbjct: 194 MIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGD 253
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+ ++ +M+ R S VTY LI+ + ++G +EEA M Y++
Sbjct: 254 LERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNP 313
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
L+ G+ + A V +EM AG P T+N I D G + +E+ +
Sbjct: 314 LIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA----RELLSSM 369
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
+PD+V++NTL+ + + G E S +F +++ P T+NTLI G+ + A+
Sbjct: 370 AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQ 429
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
+ + M + PD+ TY ++ + G + +V EM KP+ Y++
Sbjct: 430 RLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGE 489
Query: 305 ANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAF--LEFKKR---- 358
+ +K L EE+ + T H L + N + D L + + +EF+++
Sbjct: 490 LRLGDSDKAFRLHEEMVA---TDHHA--PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRV 544
Query: 359 GIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKS 418
G+ D T ++ Y + M S+ Y L+Y H++ ++
Sbjct: 545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQA 604
Query: 419 EMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVAT 478
E+ ++G+ P+++++N ++Y C+ G + EA R L +M++ P+ +Y ++
Sbjct: 605 FQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISK 664
Query: 479 YAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEA 523
+ E + + + M+ + +PD T+ ++ K H E
Sbjct: 665 NCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREV 709
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 204/435 (46%), Gaps = 11/435 (2%)
Query: 3 MDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
++MK + + T+N LI+ EEA +++ +G ++N L++ Y K
Sbjct: 262 LEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQ 321
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
+A V +M + G P+ TY I A G +++A EL + M PDV +Y
Sbjct: 322 GLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSY 377
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
TL+ G++ K A +F+++R P+I T+N LI + G ++ +E+
Sbjct: 378 NTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTT 437
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
PD++T+ TL+ F +NG S + V+ EM R G P+ + T R G D+
Sbjct: 438 QLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDK 497
Query: 243 ARAVYKRMLEAG-VTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL 301
A +++ M+ PDL+ YN + L + G ++ + ++ P+ VTY++++
Sbjct: 498 AFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVI 557
Query: 302 HAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIP 361
Y +F+ L +E+ ++ + L+ ++K L +A E KKRG+
Sbjct: 558 RGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVR 617
Query: 362 HDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMI 421
++ T NA+L + + + + L M E G P S L S+ +F K E +
Sbjct: 618 PNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIP---PNKYSYTMLISKNCDFEKWEEV 674
Query: 422 L---REILEKGIEPD 433
+ +E+L+K IEPD
Sbjct: 675 VKLYKEMLDKEIEPD 689
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 197/471 (41%), Gaps = 40/471 (8%)
Query: 93 AYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKP 152
Y + + E+ L +M+ K P V +L +++ A V+E M G P
Sbjct: 177 VYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMP 236
Query: 153 NICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVF 212
+ TFN ++ G + K++ E+K VT+N L+ F +NG E
Sbjct: 237 TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFH 296
Query: 213 KEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARG 272
+M+R+GF +FN LI Y + G FD A V ML AG+ P STYN + AL
Sbjct: 297 GDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDF 356
Query: 273 GLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLL 332
G + + ++LS M P+ V+Y++L+H Y +F + + L +++ +G I V
Sbjct: 357 GRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTY 412
Query: 333 KTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYE 392
TL+ + L A+ E + I D+ T ++ + + ++ ++ M
Sbjct: 413 NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLR 472
Query: 393 SGFT-------------LSLPGYNSLMYLHS-----------------------RTRNFR 416
G L L + LH + N
Sbjct: 473 KGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLV 532
Query: 417 KSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFV 476
K+ R+I G+ PD ++Y VI Y NG+ A+ + +EM P V+TY +
Sbjct: 533 KAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLI 592
Query: 477 ATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFV 527
+A +A M K+G +P+ T+N+++ CK +EAY ++
Sbjct: 593 YGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYL 643
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 135/305 (44%), Gaps = 38/305 (12%)
Query: 4 DMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
D+++ + P + T+NTLI C +G+L E A L EE+ + PD++TY L+ + K+
Sbjct: 399 DLRAGDIHPSIVTYNTLIDGLCESGNL-EGAQRLKEEMTTQLIFPDVITYTTLVKGFVKN 457
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVR-------------------------- 96
A EV +M +G P YT+ +R
Sbjct: 458 GNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTI 517
Query: 97 -----DGL-----LEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMR 146
DGL L +A+E + ++ + PD TYTT++ G++ + ++A +++EM
Sbjct: 518 YNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEML 577
Query: 147 TAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDS 206
P++ T+ LI + G + + E+K P+++T N LL + G
Sbjct: 578 RKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNID 637
Query: 207 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVL 266
E +M+ G P + ++ LIS +++ +YK ML+ + PD T+ A+
Sbjct: 638 EAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALF 697
Query: 267 AALAR 271
L +
Sbjct: 698 KHLEK 702
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 91/191 (47%), Gaps = 3/191 (1%)
Query: 348 AEHAFLEFKK---RGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNS 404
AE L F+K +G + N +L + +++ K + + + M E G ++ +N+
Sbjct: 184 AEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNT 243
Query: 405 LMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPA 464
++ + + + + I E+ + IE ++YNI+I + +NGKM EA+R +M+
Sbjct: 244 MLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSG 303
Query: 465 PVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAY 524
++N + Y +F +A GV M+ G P +TYN + C ++A
Sbjct: 304 FAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR 363
Query: 525 NFVHNLSSLDL 535
+ ++++ D+
Sbjct: 364 ELLSSMAAPDV 374
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 190/386 (49%), Gaps = 6/386 (1%)
Query: 1 MLMDMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+LM MK G+ PD+ F I C+AG L E LF+ +KL G+ D V+ ++++D +
Sbjct: 293 LLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFK-LKLFGISQDSVSVSSVIDGF 351
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
K +P+EA++++ R P+I Y+S +S G + A + ++ E + PD
Sbjct: 352 CKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDC 408
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
YTT++ G+ N + + A + F + +G P++ T LI G ++ VF+
Sbjct: 409 VCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRN 468
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+K D+VT+N L+ +G+ ++V + EM+ AG P+ T+N LI + G
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY 528
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
D+A + ++ G P + V+ ++ G ++++ + M + R KP+ VT S+
Sbjct: 529 IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSA 588
Query: 300 LLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVL-VNSKFDFLAEAEHAFLEFKKR 358
LLH Y + EK L ++ + VL TL+ S D E L ++
Sbjct: 589 LLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Query: 359 GIPHDITTLNAMLSLYGRKKLVAKTN 384
+P++ T +L L G++ + ++T+
Sbjct: 649 MLPNESTHHALVLGLEGKRFVNSETH 674
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 122/542 (22%), Positives = 236/542 (43%), Gaps = 61/542 (11%)
Query: 16 TFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQM 75
F+ LI CC AL+L ++ G+ P +LL + + A E ++ M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 76 ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKD 135
SRG + + I Y DG ++ EL M I+PD+ +T + A
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 136 ELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGK---VFKEIKACQCSPDIVTW 192
+ A V +++ G + + +++I F ++GK K I + + P+I +
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVID------GFCKVGKPEEAIKLIHSFRLRPNIFVY 376
Query: 193 NTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLE 252
++ L+ G S +F+E+ G +P+ + T+I Y G D+A + +L+
Sbjct: 377 SSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLK 436
Query: 253 AGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEK 312
+G P L+T ++ A +R G +E V M+ K + VTY++L+H Y + K
Sbjct: 437 SGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNK 496
Query: 313 MNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLS 372
+ L +E+ S GI D+ T N ++
Sbjct: 497 VFELIDEMRSA-----------------------------------GISPDVATYNILIH 521
Query: 373 LYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEP 432
+ + + N+I+ + GF S + ++ S+ +F+++ ++ + + ++P
Sbjct: 522 SMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKP 581
Query: 433 DLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVV 492
D+++ + +++ YC+ +M +A + N++ D PDVV YNT + Y + +A ++
Sbjct: 582 DVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELI 641
Query: 493 QCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEKGRLLER-IAE 551
M+++G P+++T++++V L E FV+ SE LLE I
Sbjct: 642 GLMVQRGMLPNESTHHALV-------LGLEGKRFVN---------SETHASMLLEEIIVA 685
Query: 552 KW 553
KW
Sbjct: 686 KW 687
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 149/320 (46%), Gaps = 7/320 (2%)
Query: 10 LAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEA 68
L P++ +++ +S C G + A +F+EI GL PD V Y ++D Y R +A
Sbjct: 369 LRPNIFVYSSFLSNICSTGDMLR-ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKA 427
Query: 69 MEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSG 128
+ + G PPS+ T T LI A R G + +A + M + +K DV TY L+ G
Sbjct: 428 FQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHG 487
Query: 129 FVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPD 188
+ + + +EMR+AG P++ T+N LI RG E ++ E+ P
Sbjct: 488 YGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPS 547
Query: 189 IVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYK 248
+ + ++ F + G E ++ M P+ T + L+ Y + ++A ++
Sbjct: 548 TLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFN 607
Query: 249 RMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGK 308
++L+AG+ PD+ YN ++ G E++ +++ M PNE T+ +L+ GK
Sbjct: 608 KLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLG-LEGK 666
Query: 309 EF----EKMNALAEEIYSGK 324
F + L EEI K
Sbjct: 667 RFVNSETHASMLLEEIIVAK 686
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 190/386 (49%), Gaps = 6/386 (1%)
Query: 1 MLMDMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+LM MK G+ PD+ F I C+AG L E LF+ +KL G+ D V+ ++++D +
Sbjct: 293 LLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFK-LKLFGISQDSVSVSSVIDGF 351
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
K +P+EA++++ R P+I Y+S +S G + A + ++ E + PD
Sbjct: 352 CKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDC 408
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
YTT++ G+ N + + A + F + +G P++ T LI G ++ VF+
Sbjct: 409 VCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRN 468
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+K D+VT+N L+ +G+ ++V + EM+ AG P+ T+N LI + G
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY 528
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
D+A + ++ G P + V+ ++ G ++++ + M + R KP+ VT S+
Sbjct: 529 IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSA 588
Query: 300 LLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVL-VNSKFDFLAEAEHAFLEFKKR 358
LLH Y + EK L ++ + VL TL+ S D E L ++
Sbjct: 589 LLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Query: 359 GIPHDITTLNAMLSLYGRKKLVAKTN 384
+P++ T +L L G++ + ++T+
Sbjct: 649 MLPNESTHHALVLGLEGKRFVNSETH 674
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 122/542 (22%), Positives = 236/542 (43%), Gaps = 61/542 (11%)
Query: 16 TFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQM 75
F+ LI CC AL+L ++ G+ P +LL + + A E ++ M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 76 ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKD 135
SRG + + I Y DG ++ EL M I+PD+ +T + A
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 136 ELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGK---VFKEIKACQCSPDIVTW 192
+ A V +++ G + + +++I F ++GK K I + + P+I +
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVID------GFCKVGKPEEAIKLIHSFRLRPNIFVY 376
Query: 193 NTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLE 252
++ L+ G S +F+E+ G +P+ + T+I Y G D+A + +L+
Sbjct: 377 SSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLK 436
Query: 253 AGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEK 312
+G P L+T ++ A +R G +E V M+ K + VTY++L+H Y + K
Sbjct: 437 SGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNK 496
Query: 313 MNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLS 372
+ L +E+ S GI D+ T N ++
Sbjct: 497 VFELIDEMRSA-----------------------------------GISPDVATYNILIH 521
Query: 373 LYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEP 432
+ + + N+I+ + GF S + ++ S+ +F+++ ++ + + ++P
Sbjct: 522 SMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKP 581
Query: 433 DLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVV 492
D+++ + +++ YC+ +M +A + N++ D PDVV YNT + Y + +A ++
Sbjct: 582 DVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELI 641
Query: 493 QCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEKGRLLER-IAE 551
M+++G P+++T++++V L E FV+ SE LLE I
Sbjct: 642 GLMVQRGMLPNESTHHALV-------LGLEGKRFVN---------SETHASMLLEEIIVA 685
Query: 552 KW 553
KW
Sbjct: 686 KW 687
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 149/320 (46%), Gaps = 7/320 (2%)
Query: 10 LAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEA 68
L P++ +++ +S C G + A +F+EI GL PD V Y ++D Y R +A
Sbjct: 369 LRPNIFVYSSFLSNICSTGDMLR-ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKA 427
Query: 69 MEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSG 128
+ + G PPS+ T T LI A R G + +A + M + +K DV TY L+ G
Sbjct: 428 FQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHG 487
Query: 129 FVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPD 188
+ + + +EMR+AG P++ T+N LI RG E ++ E+ P
Sbjct: 488 YGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPS 547
Query: 189 IVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYK 248
+ + ++ F + G E ++ M P+ T + L+ Y + ++A ++
Sbjct: 548 TLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFN 607
Query: 249 RMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGK 308
++L+AG+ PD+ YN ++ G E++ +++ M PNE T+ +L+ GK
Sbjct: 608 KLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLG-LEGK 666
Query: 309 EF----EKMNALAEEIYSGK 324
F + L EEI K
Sbjct: 667 RFVNSETHASMLLEEIIVAK 686
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 167/343 (48%), Gaps = 6/343 (1%)
Query: 6 KSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRP 65
K + PD ++ LIS A+ LF E+K +G RPD YNAL+ + +R
Sbjct: 125 KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDK 184
Query: 66 KEAMEVLKQM--ESRGF---PPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+A+E ++ + +G P++VTY L+ A+ + G +++ L + + PDVY
Sbjct: 185 AKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVY 244
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
T+ ++ + + V MR+ CKP+I TFN LI YG + F +M + FK +
Sbjct: 245 TFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSL 304
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ P + T+N+++ +G+ + + VFK+M ++P T+ +I Y CGS
Sbjct: 305 MRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSV 364
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
+AR +++ + E+ ST NA+L R GL+ +++K+ R P+ TY L
Sbjct: 365 SRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFL 424
Query: 301 LHAYANGKEFEKMNALAEEI-YSGKITTHAVLLKTLVLVNSKF 342
AY E++ L +++ G + L+ L + S+
Sbjct: 425 YKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFGSRL 467
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 159/346 (45%), Gaps = 6/346 (1%)
Query: 55 LLDVYGKSRRPKEAMEVLKQME-SRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEK 113
L + GKS + + +EV + M+ R + P Y+ LIS + G A+ L ++M
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS 162
Query: 114 HIKPDVYTYTTLLSGFVNAKKDELAMR----VFEEMR-TAGCKPNICTFNALIKMYGDRG 168
+PD Y L++ ++ + A+ ++M+ C+PN+ T+N L++ + G
Sbjct: 163 GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSG 222
Query: 169 MFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFN 228
++ +FK++ SPD+ T+N ++ +G+NG+ E+ V M+ P+ TFN
Sbjct: 223 KVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFN 282
Query: 229 TLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENG 288
LI +Y + F++ +K ++ + P L T+N+++ + + +++E V +M +
Sbjct: 283 VLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDM 342
Query: 289 RCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEA 348
P+ +TY ++ Y + + EE+ A L ++ V + EA
Sbjct: 343 NYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEA 402
Query: 349 EHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESG 394
+ F + D +T + Y + + + ++K M + G
Sbjct: 403 DKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDG 448
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 149/311 (47%), Gaps = 5/311 (1%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEI--KLAGL---RPDMVTYNAL 55
+ +MK+ G PD +N LI+ +ALE K+ G+ +P++VTYN L
Sbjct: 155 LFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNIL 214
Query: 56 LDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHI 115
L + +S + + + K ++ P + T+ ++ AY ++G+++E + +M
Sbjct: 215 LRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNEC 274
Query: 116 KPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGK 175
KPD+ T+ L+ + ++ E + F+ + + KP + TFN++I YG M +
Sbjct: 275 KPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEW 334
Query: 176 VFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYS 235
VFK++ P +T+ ++ ++G G S +F+E+ + V + T N ++ Y
Sbjct: 335 VFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYC 394
Query: 236 RCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEV 295
R G + +A ++ V PD STY + A + + EQ + ++ +ME PN+
Sbjct: 395 RNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKR 454
Query: 296 TYSSLLHAYAN 306
+ L + +
Sbjct: 455 FFLEALEVFGS 465
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 149/320 (46%), Gaps = 10/320 (3%)
Query: 211 VFKEM-KRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAA- 268
VF+ M K+ ++P+ ++ LIS + G A ++ M +G PD S YNA++ A
Sbjct: 119 VFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAH 178
Query: 269 ---LARGGLWEQSEKVLSEMEN-GRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGK 324
+ E+ L +M+ RC+PN VTY+ LL A+A + +++NAL +++
Sbjct: 179 LHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSP 238
Query: 325 ITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTN 384
++ ++ K + E E + DI T N ++ YG+K+ K
Sbjct: 239 VSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKME 298
Query: 385 KILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYN--IVIY 442
+ K + S +LP +NS++ + + R K+E + +++ + P I+Y I++Y
Sbjct: 299 QTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMY 358
Query: 443 AYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKP 502
YC G ++ A+ I E+ + V T N + Y N ++ EA + P
Sbjct: 359 GYC--GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHP 416
Query: 503 DQNTYNSIVDWYCKLHLREE 522
D +TY + Y K ++E+
Sbjct: 417 DASTYKFLYKAYTKADMKEQ 436
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 153/361 (42%), Gaps = 40/361 (11%)
Query: 152 PNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSE---- 207
P+ ++ LI + G +G +F E+K C PD +N L+ ++
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 208 VSGVFKEMKRAGFV-PERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVL 266
V G +MK P T+N L+ A+++ G DQ A++K + + V+PD+ T+N V+
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 267 AALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKIT 326
A + G+ ++ E VL+ M + CKP+ +T++ L+ +Y +EFEKM
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKM------------- 297
Query: 327 THAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKI 386
E F + + T N+M+ YG+ +++ K +
Sbjct: 298 ----------------------EQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWV 335
Query: 387 LKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCR 446
K M + + S Y ++ ++ + ++ I E+ E + N ++ YCR
Sbjct: 336 FKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCR 395
Query: 447 NGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNT 506
NG EA ++ + PD TY Y M + +++ M K G P++
Sbjct: 396 NGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRF 455
Query: 507 Y 507
+
Sbjct: 456 F 456
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 9/179 (5%)
Query: 352 FLEFKKRGIPHDITTLNAMLS--LYGRKKLVA--KTNKILKFMYESGFTLSLPG---YNS 404
F E K G D + NA+++ L+ R K A K L M G P YN
Sbjct: 156 FSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKM--KGIERCQPNVVTYNI 213
Query: 405 LMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPA 464
L+ +++ + + +++ + PD+ ++N V+ AY +NG + E + +L M+
Sbjct: 214 LLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNE 273
Query: 465 PVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEA 523
PD++T+N + +Y F + + +++ KP T+NS++ Y K + ++A
Sbjct: 274 CKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKA 332
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 166/348 (47%), Gaps = 16/348 (4%)
Query: 6 KSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRP 65
K + PD ++ LIS A+ LF E+K +G RPD YNAL+ + +R
Sbjct: 125 KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDK 184
Query: 66 KEAMEVLKQMESRGF----------PPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHI 115
+A+E + RG+ P++VTY L+ A+ + G +++ L + +
Sbjct: 185 AKALEKV-----RGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPV 239
Query: 116 KPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGK 175
PDVYT+ ++ + + V MR+ CKP+I TFN LI YG + F +M +
Sbjct: 240 SPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQ 299
Query: 176 VFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYS 235
FK + + P + T+N+++ +G+ + + VFK+M ++P T+ +I Y
Sbjct: 300 TFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYG 359
Query: 236 RCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEV 295
CGS +AR +++ + E+ ST NA+L R GL+ +++K+ R P+
Sbjct: 360 YCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDAS 419
Query: 296 TYSSLLHAYANGKEFEKMNALAEEI-YSGKITTHAVLLKTLVLVNSKF 342
TY L AY E++ L +++ G + L+ L + S+
Sbjct: 420 TYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFGSRL 467
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 149/311 (47%), Gaps = 5/311 (1%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEI--KLAGL---RPDMVTYNAL 55
+ +MK+ G PD +N LI+ +ALE K+ G+ +P++VTYN L
Sbjct: 155 LFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNIL 214
Query: 56 LDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHI 115
L + +S + + + K ++ P + T+ ++ AY ++G+++E + +M
Sbjct: 215 LRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNEC 274
Query: 116 KPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGK 175
KPD+ T+ L+ + ++ E + F+ + + KP + TFN++I YG M +
Sbjct: 275 KPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEW 334
Query: 176 VFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYS 235
VFK++ P +T+ ++ ++G G S +F+E+ + V + T N ++ Y
Sbjct: 335 VFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYC 394
Query: 236 RCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEV 295
R G + +A ++ V PD STY + A + + EQ + ++ +ME PN+
Sbjct: 395 RNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKR 454
Query: 296 TYSSLLHAYAN 306
+ L + +
Sbjct: 455 FFLEALEVFGS 465
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 159/346 (45%), Gaps = 6/346 (1%)
Query: 55 LLDVYGKSRRPKEAMEVLKQME-SRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEK 113
L + GKS + + +EV + M+ R + P Y+ LIS + G A+ L ++M
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS 162
Query: 114 HIKPDVYTYTTLLSGFVNAKKDELAMR----VFEEMR-TAGCKPNICTFNALIKMYGDRG 168
+PD Y L++ ++ + A+ ++M+ C+PN+ T+N L++ + G
Sbjct: 163 GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSG 222
Query: 169 MFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFN 228
++ +FK++ SPD+ T+N ++ +G+NG+ E+ V M+ P+ TFN
Sbjct: 223 KVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFN 282
Query: 229 TLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENG 288
LI +Y + F++ +K ++ + P L T+N+++ + + +++E V +M +
Sbjct: 283 VLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDM 342
Query: 289 RCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEA 348
P+ +TY ++ Y + + EE+ A L ++ V + EA
Sbjct: 343 NYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEA 402
Query: 349 EHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESG 394
+ F + D +T + Y + + + ++K M + G
Sbjct: 403 DKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDG 448
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 149/320 (46%), Gaps = 10/320 (3%)
Query: 211 VFKEM-KRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAA- 268
VF+ M K+ ++P+ ++ LIS + G A ++ M +G PD S YNA++ A
Sbjct: 119 VFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAH 178
Query: 269 ---LARGGLWEQSEKVLSEMEN-GRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGK 324
+ E+ L +M+ RC+PN VTY+ LL A+A + +++NAL +++
Sbjct: 179 LHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSP 238
Query: 325 ITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTN 384
++ ++ K + E E + DI T N ++ YG+K+ K
Sbjct: 239 VSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKME 298
Query: 385 KILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYN--IVIY 442
+ K + S +LP +NS++ + + R K+E + +++ + P I+Y I++Y
Sbjct: 299 QTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMY 358
Query: 443 AYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKP 502
YC G ++ A+ I E+ + V T N + Y N ++ EA + P
Sbjct: 359 GYC--GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHP 416
Query: 503 DQNTYNSIVDWYCKLHLREE 522
D +TY + Y K ++E+
Sbjct: 417 DASTYKFLYKAYTKADMKEQ 436
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 153/361 (42%), Gaps = 40/361 (11%)
Query: 152 PNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSE---- 207
P+ ++ LI + G +G +F E+K C PD +N L+ ++
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 208 VSGVFKEMKRAGFV-PERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVL 266
V G +MK P T+N L+ A+++ G DQ A++K + + V+PD+ T+N V+
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 267 AALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKIT 326
A + G+ ++ E VL+ M + CKP+ +T++ L+ +Y +EFEKM
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKM------------- 297
Query: 327 THAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKI 386
E F + + T N+M+ YG+ +++ K +
Sbjct: 298 ----------------------EQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWV 335
Query: 387 LKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCR 446
K M + + S Y ++ ++ + ++ I E+ E + N ++ YCR
Sbjct: 336 FKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCR 395
Query: 447 NGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNT 506
NG EA ++ + PD TY Y M + +++ M K G P++
Sbjct: 396 NGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRF 455
Query: 507 Y 507
+
Sbjct: 456 F 456
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 9/179 (5%)
Query: 352 FLEFKKRGIPHDITTLNAMLS--LYGRKKLVA--KTNKILKFMYESGFTLSLPG---YNS 404
F E K G D + NA+++ L+ R K A K L M G P YN
Sbjct: 156 FSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKM--KGIERCQPNVVTYNI 213
Query: 405 LMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPA 464
L+ +++ + + +++ + PD+ ++N V+ AY +NG + E + +L M+
Sbjct: 214 LLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNE 273
Query: 465 PVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEA 523
PD++T+N + +Y F + + +++ KP T+NS++ Y K + ++A
Sbjct: 274 CKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKA 332
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 191/384 (49%), Gaps = 5/384 (1%)
Query: 5 MKSQGLAPDLCTFNTL-ISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M+ +G+ P++ +N + ++ CR ++ + A +F E+ GL P+ TY+ L+D + K++
Sbjct: 475 MEQKGIEPNVVFYNNMMLAHCRMKNM-DLARSIFSEMLEKGLEPNNFTYSILIDGFFKNK 533
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALE-LKNQMVEKHIKPDVYTY 122
+ A +V+ QM + F + V Y ++I+ + G +A E L+N + EK +Y
Sbjct: 534 DEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSY 593
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
+++ GFV + A+ + EM G PN+ TF +LI + ++ E+K+
Sbjct: 594 NSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKS 653
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
+ D+ + L+ F + +F E+ G +P +N+LIS + G D
Sbjct: 654 MELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDA 713
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
A +YK+M+ G++ DL TY ++ L + G + + SE+ + P+E+ + L++
Sbjct: 714 AIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVN 773
Query: 303 AYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPH 362
+ +F K + + EE+ +T + +L T++ + + L EA E ++GI H
Sbjct: 774 GLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVH 833
Query: 363 DITTLNAMLSLYGRKKLVAKTNKI 386
D T N ++S GR + +KI
Sbjct: 834 DDTVFNLLVS--GRVEKPPAASKI 855
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/587 (19%), Positives = 246/587 (41%), Gaps = 79/587 (13%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M + + P + N ++S +L +EA E++ ++ L G+ D VT L+ + R+
Sbjct: 195 MVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERK 254
Query: 65 PKEAMEVLKQMESR------------------------------------GFPPSIVTYT 88
P+EA+++ +++ SR G P S TYT
Sbjct: 255 PEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYT 314
Query: 89 SLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTA 148
S+I A+V++G +EEA+ + ++MV I V T+L++G+ + A+ +F M
Sbjct: 315 SVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEE 374
Query: 149 GCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIV------------------ 190
G P+ F+ +++ + + + + +K+ + +P V
Sbjct: 375 GLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAA 434
Query: 191 ---------TW-------NTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAY 234
+W N + +F + G + K M++ G P +N ++ A+
Sbjct: 435 LEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAH 494
Query: 235 SRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNE 294
R + D AR+++ MLE G+ P+ TY+ ++ + + + V+++M + NE
Sbjct: 495 CRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANE 554
Query: 295 VTYSSLLHAYANGKEFEK-----MNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAE 349
V Y+++++ + K N + E+ YS T++ ++ V V A
Sbjct: 555 VIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDT----DSAV 610
Query: 350 HAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLH 409
+ E + G ++ T ++++ + + + ++ M L LP Y +L+
Sbjct: 611 ETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGF 670
Query: 410 SRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDV 469
+ + + + + E+ E G+ P++ YN +I + GKM A + +M + D+
Sbjct: 671 CKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDL 730
Query: 470 VTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
TY T + + A + ++ G PD+ + +V+ K
Sbjct: 731 FTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSK 777
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/472 (23%), Positives = 214/472 (45%), Gaps = 46/472 (9%)
Query: 52 YNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMV 111
+N LL+ Y +++R A++ M R P + +++S+ VR L++EA E+ N+MV
Sbjct: 172 FNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMV 231
Query: 112 EKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFA 171
+ D T L+ + +K E A+++F + + G +P+ F+ ++
Sbjct: 232 LIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQ--------- 282
Query: 172 EMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMK-RAGFVPERETFNTL 230
AC+ +PD+V LL +EM+ + G +ET+ ++
Sbjct: 283 ---------AACK-TPDLVMALDLL----------------REMRGKLGVPASQETYTSV 316
Query: 231 ISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRC 290
I A+ + G+ ++A V M+ G+ + +++ +G ++ + + ME
Sbjct: 317 IVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGL 376
Query: 291 KPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEH 350
P++V +S ++ + E EK + S +I +VL+ T++ K + A
Sbjct: 377 APDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALE 436
Query: 351 AFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHS 410
F + + I H N + L+ ++ V LK M + G ++ YN++M H
Sbjct: 437 IFNDSFESWIAHGFMC-NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHC 495
Query: 411 RTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVV 470
R +N + I E+LEKG+EP+ +Y+I+I + +N A ++N+M + V
Sbjct: 496 RMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEV 555
Query: 471 TYNTFVATYAANSMFGEAIGVVQCMIKQ-----GCKPDQNTYNSIVDWYCKL 517
YNT + +A ++Q +IK+ C +YNSI+D + K+
Sbjct: 556 IYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSC----TSYNSIIDGFVKV 603
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/510 (21%), Positives = 229/510 (44%), Gaps = 4/510 (0%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M G+ + +L++ G+ +AL+LF ++ GL PD V ++ +++ + K+
Sbjct: 335 EMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNM 394
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
++A+E +M+S PS V ++I ++ E ALE+ N E I
Sbjct: 395 EMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNK 454
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
L F K + A + M G +PN+ +N ++ + +F E+
Sbjct: 455 IFLL-FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEK 513
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
P+ T++ L+ F +N + V +M + F +NT+I+ + G +A
Sbjct: 514 GLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKA 573
Query: 244 RAVYKRML-EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM-ENGRCKPNEVTYSSLL 301
+ + + ++ E + ++YN+++ + G + + + EM ENG+ PN VT++SL+
Sbjct: 574 KEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGK-SPNVVTFTSLI 632
Query: 302 HAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIP 361
+ + + + E+ S ++ L+ K + + A F E + G+
Sbjct: 633 NGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLM 692
Query: 362 HDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMI 421
+++ N+++S + + + K M G + L Y +++ + N + +
Sbjct: 693 PNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDL 752
Query: 422 LREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAA 481
E+L+ GI PD I + +++ + G+ +A ++L EMK P+V+ Y+T +A +
Sbjct: 753 YSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHR 812
Query: 482 NSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
EA + M+++G D +N +V
Sbjct: 813 EGNLNEAFRLHDEMLEKGIVHDDTVFNLLV 842
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/476 (22%), Positives = 206/476 (43%), Gaps = 37/476 (7%)
Query: 3 MDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
M MKS +AP +T+I C E ALE+F + + + + N + ++ K
Sbjct: 404 MRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMC-NKIFLLFCKQ 462
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
+ A LK ME +G P++V Y +++ A+ R ++ A + ++M+EK ++P+ +TY
Sbjct: 463 GKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTY 522
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE-IK 181
+ L+ GF K ++ A V +M + + N +N +I G ++ ++ + IK
Sbjct: 523 SILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIK 582
Query: 182 ACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFD 241
+ S ++N+++ F + G ++EM G P TF +LI+ + + D
Sbjct: 583 EKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMD 642
Query: 242 QARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL 301
A + M + DL Y A++ + + + + SE+ PN Y+SL+
Sbjct: 643 LALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLI 702
Query: 302 HAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIP 361
+ N + + L +++ + I+ T++ K + A + E GI
Sbjct: 703 SGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIV 762
Query: 362 HDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMI 421
D +IL + +G S+ F K+ +
Sbjct: 763 PD---------------------EILHMVLVNGL--------------SKKGQFLKASKM 787
Query: 422 LREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVA 477
L E+ +K + P+++ Y+ VI + R G + EA R+ +EM + V D +N V+
Sbjct: 788 LEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVS 843
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 2/198 (1%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
M +MKS L DL + LI C+ + + A LF E+ GL P++ YN+L+ +
Sbjct: 647 MTHEMKSMELKLDLPAYGALIDGFCKKNDM-KTAYTLFSELPELGLMPNVSVYNSLISGF 705
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
+ A+++ K+M + G + TYT++I ++DG + A +L +++++ I PD
Sbjct: 706 RNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDE 765
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
+ L++G + A ++ EEM+ PN+ ++ +I + G E ++ E
Sbjct: 766 ILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDE 825
Query: 180 IKACQCSPDIVTWNTLLA 197
+ D +N L++
Sbjct: 826 MLEKGIVHDDTVFNLLVS 843
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 119/270 (44%), Gaps = 1/270 (0%)
Query: 208 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLA 267
V+ + KR GF FN L++AY R D A + M++ V P + N VL+
Sbjct: 153 VNNLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLS 212
Query: 268 ALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITT 327
+L R L ++++++ ++M + VT L+ A ++ E+ + + S
Sbjct: 213 SLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEP 272
Query: 328 HAVLLKTLVLVNSKFDFLAEAEHAFLEFK-KRGIPHDITTLNAMLSLYGRKKLVAKTNKI 386
+L V K L A E + K G+P T +++ + ++ + + ++
Sbjct: 273 DGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRV 332
Query: 387 LKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCR 446
+ M G +S+ SL+ + + K+ + + E+G+ PD + +++++ +C+
Sbjct: 333 MDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCK 392
Query: 447 NGKMTEAKRILNEMKDPAPVPDVVTYNTFV 476
N +M +A MK P V +T +
Sbjct: 393 NMEMEKAIEFYMRMKSVRIAPSSVLVHTMI 422
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/360 (19%), Positives = 151/360 (41%), Gaps = 14/360 (3%)
Query: 187 PDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAV 246
P + N +L+ ++ L E ++ +M G + T L+ A R ++A +
Sbjct: 202 PFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKI 261
Query: 247 YKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKP-NEVTYSSLLHAYA 305
++R++ G PD ++ + A + + +L EM P ++ TY+S++ A+
Sbjct: 262 FRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFV 321
Query: 306 NGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDIT 365
E+ + +E+ I + +LV K + L +A F ++ G+ D
Sbjct: 322 KEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKV 381
Query: 366 TLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEM----- 420
+ M+ + + + K ++F P S + +H+ + K+E
Sbjct: 382 MFSVMVEWFCKN---MEMEKAIEFYMRMKSVRIAP---SSVLVHTMIQGCLKAESPEAAL 435
Query: 421 -ILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATY 479
I + E I + N + +C+ GK+ A L M+ P+VV YN + +
Sbjct: 436 EIFNDSFESWIAHGFMC-NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAH 494
Query: 480 AANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSE 539
A + M+++G +P+ TY+ ++D + K + A++ ++ +++ + +E
Sbjct: 495 CRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANE 554
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 160/320 (50%), Gaps = 6/320 (1%)
Query: 2 LMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGK 61
M MK G P + + N +S + AL + E++ + P+ T N ++ Y +
Sbjct: 191 FMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCR 250
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYT 121
S + + +E+L+ ME GF + V+Y +LI+ + GLL AL+LKN M + ++P+V T
Sbjct: 251 SGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVT 310
Query: 122 YTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK 181
+ TL+ GF A K + A +VF EM+ PN T+N LI Y +G EM F E
Sbjct: 311 FNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDH-EMAFRFYEDM 369
Query: 182 ACQ-CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
C DI+T+N L+ + + + KE+ + VP TF+ LI +
Sbjct: 370 VCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNA 429
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
D+ +YK M+ +G P+ T+N +++A R ++ + +VL EM R P + S
Sbjct: 430 DRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVR-RSIPLD---SRT 485
Query: 301 LHAYANGKEFEKMNALAEEI 320
+H NG + + + L +++
Sbjct: 486 VHQVCNGLKHQGKDQLVKKL 505
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 165/348 (47%), Gaps = 6/348 (1%)
Query: 52 YNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMV 111
+++L + ++ + A + QM+ GF P++ + + +S+ + G ++ AL +M
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 112 EKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFA 171
I P+ YT ++SG+ + K + + + ++M G + ++N LI + ++G+ +
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 172 EMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLI 231
K+ + P++VT+NTL+ F + E S VF EMK P T+NTLI
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 232 SAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCK 291
+ YS+ G + A Y+ M+ G+ D+ TYNA++ L + ++ + + E++
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 292 PNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHA 351
PN T+S+L+ K ++ L + + + LV + + A
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 352 FLEFKKRGIPHDITTLNAM---LSLYGRKKLVAKTNKIL---KFMYES 393
E +R IP D T++ + L G+ +LV K + + KF+ ES
Sbjct: 471 LREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQES 518
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 184/412 (44%), Gaps = 19/412 (4%)
Query: 51 TYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQM 110
T+ +L K+R+ K A +L+ + +V + A V D LL E +
Sbjct: 117 THAIVLHTLTKNRKFKSAESILRDV--------LVNGGVDLPAKVFDALLYSYRECDST- 167
Query: 111 VEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMF 170
P V+ +L F + KK A F +M+ G P + + NA + +G
Sbjct: 168 ------PRVFD--SLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRV 219
Query: 171 AEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNG-LDSEVSGVFKEMKRAGFVPERETFNT 229
+ ++E++ C+ SP+ T N +++ + ++G LD + + ++M+R GF ++NT
Sbjct: 220 DIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIE-LLQDMERLGFRATDVSYNT 278
Query: 230 LISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGR 289
LI+ + G A + M ++G+ P++ T+N ++ R +++ KV EM+
Sbjct: 279 LIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVN 338
Query: 290 CKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAE 349
PN VTY++L++ Y+ + E E++ I + L+ K +A
Sbjct: 339 VAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAA 398
Query: 350 HAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLH 409
E K + + +T +A++ +K + ++ K M SG + +N L+
Sbjct: 399 QFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAF 458
Query: 410 SRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMK 461
R +F + +LRE++ + I D + + V GK K++L EM+
Sbjct: 459 CRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEME 510
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 10/243 (4%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L DM+ G ++NTLI+ L AL+L + +GL+P++VT+N L+ +
Sbjct: 260 LLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFC 319
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
++ + +EA +V +M++ P+ VTY +LI+ Y + G E A MV I+ D+
Sbjct: 320 RAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDIL 379
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALI-----KMYGDRGMFAEMGK 175
TY L+ G K A + +E+ PN TF+ALI + DRG +
Sbjct: 380 TYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGF-----E 434
Query: 176 VFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYS 235
++K + C P+ T+N L++ F +N S V +EM R + T + + +
Sbjct: 435 LYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLK 494
Query: 236 RCG 238
G
Sbjct: 495 HQG 497
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 151/347 (43%), Gaps = 41/347 (11%)
Query: 174 GKVFKEI----KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNT 229
KVF + + C +P + +++L F + F +MK GF+P E+ N
Sbjct: 151 AKVFDALLYSYRECDSTPRV--FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNA 208
Query: 230 LISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGR 289
+S+ G D A Y+ M ++P+ T N V++ R G ++ ++L +ME
Sbjct: 209 YMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLG 268
Query: 290 CKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAE 349
+ +V+Y++L+ + EK + + A+ LK ++
Sbjct: 269 FRATDVSYNTLIAGHC-----EK-----------GLLSSALKLKNMM------------- 299
Query: 350 HAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLH 409
K G+ ++ T N ++ + R + + +K+ M + YN+L+ +
Sbjct: 300 ------GKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGY 353
Query: 410 SRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDV 469
S+ + + +++ GI+ D+++YN +I+ C+ K +A + + E+ VP+
Sbjct: 354 SQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNS 413
Query: 470 VTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
T++ + + + MI+ GC P++ T+N +V +C+
Sbjct: 414 STFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCR 460
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 4/226 (1%)
Query: 5 MKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M GL P++ TFNTLI CRA L +EA ++F E+K + P+ VTYN L++ Y +
Sbjct: 299 MGKSGLQPNVVTFNTLIHGFCRAMKL-QEASKVFGEMKAVNVAPNTVTYNTLINGYSQQG 357
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ A + M G I+TY +LI + +A + ++ ++++ P+ T++
Sbjct: 358 DHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFS 417
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
L+ G K + +++ M +GC PN TFN L+ + F +V +E+
Sbjct: 418 ALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRR 477
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNT 229
D T + + G D V + +EM+ F+ +E+FN
Sbjct: 478 SIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFL--QESFNN 521
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 2/185 (1%)
Query: 352 FLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSR 411
+ E ++ I + TLN ++S Y R + K ++L+ M GF + YN+L+ H
Sbjct: 226 YREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCE 285
Query: 412 TRNFRKSEMILREILEK-GIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVV 470
+ S + L+ ++ K G++P+++++N +I+ +CR K+ EA ++ EMK P+ V
Sbjct: 286 -KGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTV 344
Query: 471 TYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
TYNT + Y+ A + M+ G + D TYN+++ CK +A FV L
Sbjct: 345 TYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKEL 404
Query: 531 SSLDL 535
+L
Sbjct: 405 DKENL 409
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 160/320 (50%), Gaps = 6/320 (1%)
Query: 2 LMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGK 61
M MK G P + + N +S + AL + E++ + P+ T N ++ Y +
Sbjct: 191 FMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCR 250
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYT 121
S + + +E+L+ ME GF + V+Y +LI+ + GLL AL+LKN M + ++P+V T
Sbjct: 251 SGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVT 310
Query: 122 YTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK 181
+ TL+ GF A K + A +VF EM+ PN T+N LI Y +G EM F E
Sbjct: 311 FNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDH-EMAFRFYEDM 369
Query: 182 ACQ-CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
C DI+T+N L+ + + + KE+ + VP TF+ LI +
Sbjct: 370 VCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNA 429
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
D+ +YK M+ +G P+ T+N +++A R ++ + +VL EM R P + S
Sbjct: 430 DRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVR-RSIPLD---SRT 485
Query: 301 LHAYANGKEFEKMNALAEEI 320
+H NG + + + L +++
Sbjct: 486 VHQVCNGLKHQGKDQLVKKL 505
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 165/348 (47%), Gaps = 6/348 (1%)
Query: 52 YNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMV 111
+++L + ++ + A + QM+ GF P++ + + +S+ + G ++ AL +M
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 112 EKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFA 171
I P+ YT ++SG+ + K + + + ++M G + ++N LI + ++G+ +
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 172 EMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLI 231
K+ + P++VT+NTL+ F + E S VF EMK P T+NTLI
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 232 SAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCK 291
+ YS+ G + A Y+ M+ G+ D+ TYNA++ L + ++ + + E++
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 292 PNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHA 351
PN T+S+L+ K ++ L + + + LV + + A
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 352 FLEFKKRGIPHDITTLNAM---LSLYGRKKLVAKTNKIL---KFMYES 393
E +R IP D T++ + L G+ +LV K + + KF+ ES
Sbjct: 471 LREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQES 518
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 184/412 (44%), Gaps = 19/412 (4%)
Query: 51 TYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQM 110
T+ +L K+R+ K A +L+ + +V + A V D LL E +
Sbjct: 117 THAIVLHTLTKNRKFKSAESILRDV--------LVNGGVDLPAKVFDALLYSYRECDST- 167
Query: 111 VEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMF 170
P V+ +L F + KK A F +M+ G P + + NA + +G
Sbjct: 168 ------PRVFD--SLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRV 219
Query: 171 AEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNG-LDSEVSGVFKEMKRAGFVPERETFNT 229
+ ++E++ C+ SP+ T N +++ + ++G LD + + ++M+R GF ++NT
Sbjct: 220 DIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIE-LLQDMERLGFRATDVSYNT 278
Query: 230 LISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGR 289
LI+ + G A + M ++G+ P++ T+N ++ R +++ KV EM+
Sbjct: 279 LIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVN 338
Query: 290 CKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAE 349
PN VTY++L++ Y+ + E E++ I + L+ K +A
Sbjct: 339 VAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAA 398
Query: 350 HAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLH 409
E K + + +T +A++ +K + ++ K M SG + +N L+
Sbjct: 399 QFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAF 458
Query: 410 SRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMK 461
R +F + +LRE++ + I D + + V GK K++L EM+
Sbjct: 459 CRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEME 510
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 10/243 (4%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L DM+ G ++NTLI+ L AL+L + +GL+P++VT+N L+ +
Sbjct: 260 LLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFC 319
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
++ + +EA +V +M++ P+ VTY +LI+ Y + G E A MV I+ D+
Sbjct: 320 RAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDIL 379
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALI-----KMYGDRGMFAEMGK 175
TY L+ G K A + +E+ PN TF+ALI + DRG +
Sbjct: 380 TYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGF-----E 434
Query: 176 VFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYS 235
++K + C P+ T+N L++ F +N S V +EM R + T + + +
Sbjct: 435 LYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLK 494
Query: 236 RCG 238
G
Sbjct: 495 HQG 497
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 151/347 (43%), Gaps = 41/347 (11%)
Query: 174 GKVFKEI----KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNT 229
KVF + + C +P + +++L F + F +MK GF+P E+ N
Sbjct: 151 AKVFDALLYSYRECDSTPRV--FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNA 208
Query: 230 LISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGR 289
+S+ G D A Y+ M ++P+ T N V++ R G ++ ++L +ME
Sbjct: 209 YMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLG 268
Query: 290 CKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAE 349
+ +V+Y++L+ + EK + + A+ LK ++
Sbjct: 269 FRATDVSYNTLIAGHC-----EK-----------GLLSSALKLKNMM------------- 299
Query: 350 HAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLH 409
K G+ ++ T N ++ + R + + +K+ M + YN+L+ +
Sbjct: 300 ------GKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGY 353
Query: 410 SRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDV 469
S+ + + +++ GI+ D+++YN +I+ C+ K +A + + E+ VP+
Sbjct: 354 SQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNS 413
Query: 470 VTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
T++ + + + MI+ GC P++ T+N +V +C+
Sbjct: 414 STFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCR 460
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 4/226 (1%)
Query: 5 MKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M GL P++ TFNTLI CRA L +EA ++F E+K + P+ VTYN L++ Y +
Sbjct: 299 MGKSGLQPNVVTFNTLIHGFCRAMKL-QEASKVFGEMKAVNVAPNTVTYNTLINGYSQQG 357
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ A + M G I+TY +LI + +A + ++ ++++ P+ T++
Sbjct: 358 DHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFS 417
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
L+ G K + +++ M +GC PN TFN L+ + F +V +E+
Sbjct: 418 ALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRR 477
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNT 229
D T + + G D V + +EM+ F+ +E+FN
Sbjct: 478 SIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFL--QESFNN 521
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 2/185 (1%)
Query: 352 FLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSR 411
+ E ++ I + TLN ++S Y R + K ++L+ M GF + YN+L+ H
Sbjct: 226 YREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCE 285
Query: 412 TRNFRKSEMILREILEK-GIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVV 470
+ S + L+ ++ K G++P+++++N +I+ +CR K+ EA ++ EMK P+ V
Sbjct: 286 -KGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTV 344
Query: 471 TYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
TYNT + Y+ A + M+ G + D TYN+++ CK +A FV L
Sbjct: 345 TYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKEL 404
Query: 531 SSLDL 535
+L
Sbjct: 405 DKENL 409
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 122/531 (22%), Positives = 234/531 (44%), Gaps = 29/531 (5%)
Query: 33 ALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLIS 92
++EL +EI+ +G R L+ +G+ K +V Q+ G PS Y ++I
Sbjct: 129 SMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVID 188
Query: 93 AYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKP 152
A V+ L+ A QM KPD +TY L+ G + A+R+ ++M G +P
Sbjct: 189 ALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRP 248
Query: 153 NICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVF 212
N+ T+ LI + G E K + ++ + +P+ T T V G+F
Sbjct: 249 NVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTF------------VHGIF 296
Query: 213 KEMKR-------AGFVP-----ERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLS 260
+ + GF+ +R ++ ++ S + +++ E G PD S
Sbjct: 297 RCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSS 356
Query: 261 TYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEI 320
T+NA ++ L +G ++ ++ + KP Y L+ A N + F + + +++
Sbjct: 357 TFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQM 416
Query: 321 YSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLV 380
+ + ++ K + A E + RGI ++ T N LS Y + V
Sbjct: 417 GVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDV 476
Query: 381 AKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIV 440
K + +L+ + GF + ++ ++ R + + + +E+LE GIEP+ I+YNI+
Sbjct: 477 KKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNIL 536
Query: 441 IYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGC 500
I + C G + ++ +MK+ PD+ YN + ++ +A +++ M++ G
Sbjct: 537 IRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGL 596
Query: 501 KPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLH--VSEEEKGRLLERI 549
KPD TY++++ + EA SS++ H V + RL+E +
Sbjct: 597 KPDNFTYSTLIKALSESGRESEAREM---FSSIERHGCVPDSYTKRLVEEL 644
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/498 (23%), Positives = 205/498 (41%), Gaps = 35/498 (7%)
Query: 9 GLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEA 68
G+ P +N +I + + A F++++ G +PD TYN L+ K EA
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 69 MEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSG 128
+ ++KQME G P++ TYT LI ++ G ++EAL+ M + + P+ T T + G
Sbjct: 235 IRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHG 294
Query: 129 FVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPD 188
A V ++A++ + M E G+ ++I PD
Sbjct: 295 IFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPD 354
Query: 189 IVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYK 248
T+N ++ + E +F G P + L+ A F + K
Sbjct: 355 SSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLK 414
Query: 249 RMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGK 308
+M G+ + +YNAV+ L + E + L+EM++ PN VT+++ L Y+
Sbjct: 415 QMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRG 474
Query: 309 EFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLN 368
+ +K+ H VL K LV G D+ T +
Sbjct: 475 DVKKV--------------HGVLEKLLV---------------------HGFKPDVITFS 499
Query: 369 AMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEK 428
+++ R K + K M E G + YN L+ T + +S + ++ E
Sbjct: 500 LIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKEN 559
Query: 429 GIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEA 488
G+ PDL +YN I ++C+ K+ +A+ +L M PD TY+T + + + EA
Sbjct: 560 GLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEA 619
Query: 489 IGVVQCMIKQGCKPDQNT 506
+ + + GC PD T
Sbjct: 620 REMFSSIERHGCVPDSYT 637
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/486 (20%), Positives = 216/486 (44%), Gaps = 4/486 (0%)
Query: 68 AMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLS 127
+ME+LK++ G+ S LI ++ R GL + ++ Q+ +KP Y ++
Sbjct: 129 SMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVID 188
Query: 128 GFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSP 187
V + +LA F++MR+ GCKP+ T+N LI +G+ E ++ K+++ P
Sbjct: 189 ALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRP 248
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVY 247
++ T+ L+ F G E + M+ P T T + RC +A V
Sbjct: 249 NVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVL 308
Query: 248 KRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG 307
+E Y+AVL L+ + +++ + L ++ P+ T+++ + G
Sbjct: 309 VGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKG 368
Query: 308 KEFEKMNALAEEIYSGKITT--HAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDIT 365
+ + + + S + + L+ L+N++ +E + + G+ +
Sbjct: 369 HDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQR--FSEGDRYLKQMGVDGLLSSVY 426
Query: 366 TLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREI 425
+ NA++ + + + L M + G + +L +N+ + +S + +K +L ++
Sbjct: 427 SYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKL 486
Query: 426 LEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMF 485
L G +PD+I+++++I CR ++ +A EM + P+ +TYN + + +
Sbjct: 487 LVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDT 546
Query: 486 GEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEKGRL 545
++ + M + G PD YN+ + +CK+ ++A + + + L L
Sbjct: 547 DRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTL 606
Query: 546 LERIAE 551
++ ++E
Sbjct: 607 IKALSE 612
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 132/295 (44%)
Query: 2 LMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGK 61
L + +G PD TFN +SC G E +F+ G++P Y L+
Sbjct: 343 LRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLN 402
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYT 121
++R E LKQM G S+ +Y ++I + +E A +M ++ I P++ T
Sbjct: 403 AQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVT 462
Query: 122 YTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK 181
+ T LSG+ + V E++ G KP++ TF+ +I + FKE+
Sbjct: 463 FNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEML 522
Query: 182 ACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFD 241
P+ +T+N L+ G +F +MK G P+ +N I ++ +
Sbjct: 523 EWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVK 582
Query: 242 QARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVT 296
+A + K ML G+ PD TY+ ++ AL+ G ++ ++ S +E C P+ T
Sbjct: 583 KAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYT 637
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 127/259 (49%)
Query: 7 SQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPK 66
S+G+ P + L+ + E +++ + GL + +YNA++D K+RR +
Sbjct: 383 SRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIE 442
Query: 67 EAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLL 126
A L +M+ RG P++VT+ + +S Y G +++ + +++ KPDV T++ ++
Sbjct: 443 NAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLII 502
Query: 127 SGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCS 186
+ AK+ + A F+EM G +PN T+N LI+ G K+F ++K S
Sbjct: 503 NCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLS 562
Query: 187 PDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAV 246
PD+ +N + F + + + K M R G P+ T++TLI A S G +AR +
Sbjct: 563 PDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREM 622
Query: 247 YKRMLEAGVTPDLSTYNAV 265
+ + G PD T V
Sbjct: 623 FSSIERHGCVPDSYTKRLV 641
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/503 (19%), Positives = 194/503 (38%), Gaps = 107/503 (21%)
Query: 5 MKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M+S G PD T+N LI C+ G + +EA+ L ++++ G RP++ TY L+D + +
Sbjct: 206 MRSDGCKPDRFTYNILIHGVCKKG-VVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAG 264
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVR--------------------------- 96
R EA++ L+ M R P+ T + + R
Sbjct: 265 RVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYD 324
Query: 97 --------DGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTA 148
+ + +E + ++ E+ PD T+ +S + R+F+ +
Sbjct: 325 AVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSR 384
Query: 149 GCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEV 208
G KP + L++ + F+E + K++ + ++N ++ +
Sbjct: 385 GVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENA 444
Query: 209 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAA 268
+ EM+ G P TFNT +S YS G + V +++L G PD+ T++ ++
Sbjct: 445 AMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINC 504
Query: 269 LARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTH 328
L R + + EM +PNE+TY+ L+ + + + ++ L
Sbjct: 505 LCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKL------------ 552
Query: 329 AVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILK 388
F + K+ G+ D+ NA + + + + V K ++LK
Sbjct: 553 -----------------------FAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLK 589
Query: 389 FMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNG 448
M L G++PD +Y+ +I A +G
Sbjct: 590 TM-----------------------------------LRIGLKPDNFTYSTLIKALSESG 614
Query: 449 KMTEAKRILNEMKDPAPVPDVVT 471
+ +EA+ + + ++ VPD T
Sbjct: 615 RESEAREMFSSIERHGCVPDSYT 637
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/401 (21%), Positives = 170/401 (42%), Gaps = 35/401 (8%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVT--------- 51
++ M+ +G P++ T+ LI +EAL+ E +++ L P+ T
Sbjct: 237 LVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIF 296
Query: 52 --------------------------YNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIV 85
Y+A+L + KE + L+++ RG+ P
Sbjct: 297 RCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSS 356
Query: 86 TYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEM 145
T+ + +S ++ L E + + V + +KP Y L+ +NA++ R ++M
Sbjct: 357 TFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQM 416
Query: 146 RTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLD 205
G ++ ++NA+I E++ SP++VT+NT L+ + G
Sbjct: 417 GVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDV 476
Query: 206 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAV 265
+V GV +++ GF P+ TF+ +I+ R A +K MLE G+ P+ TYN +
Sbjct: 477 KKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNIL 536
Query: 266 LAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKI 325
+ + G ++S K+ ++M+ P+ Y++ + ++ ++ +K L + + +
Sbjct: 537 IRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGL 596
Query: 326 TTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITT 366
TL+ S+ +EA F ++ G D T
Sbjct: 597 KPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYT 637
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/470 (22%), Positives = 208/470 (44%), Gaps = 38/470 (8%)
Query: 48 DMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELK 107
D+ + L++ + RP+EA + + G PS++TYT+L++A R L L
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 108 NQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDR 167
+++ + +KPD + +++ + + AM++FE+M+ +GCKP TFN LIK YG
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 168 GMFAEMGKVFK-EIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERET 226
G E ++ ++ P+ T N L+ + E + +M+ G P+ T
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 227 FNTLISAYSRCGSFDQAR-AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM 285
FNTL AY+R GS A + RML V P++ T ++ G E++ + M
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Query: 286 ENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFL 345
+ PN ++SL+ + N M+ + E + D +
Sbjct: 558 KELGVHPNLFVFNSLIKGFLN---INDMDGVGEVV----------------------DLM 592
Query: 346 AEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSL 405
E G+ D+ T + +++ + + + +I M E G + ++ L
Sbjct: 593 EEF----------GVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSIL 642
Query: 406 MYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAP 465
++R K+E IL ++ + G+ P+++ Y +I +C G+M +A ++ +M
Sbjct: 643 AKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVG 702
Query: 466 V-PDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWY 514
+ P++ TY T + + +A +++ M + P + T I D +
Sbjct: 703 LSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGW 752
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 168/343 (48%), Gaps = 39/343 (11%)
Query: 8 QGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKE 67
+G P L T+ TL++ + L L +++ GL+PD + +NA+++ +S +
Sbjct: 348 EGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQ 407
Query: 68 AMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMV-EKHIKPDVYTYTTLL 126
AM++ ++M+ G P+ T+ +LI Y + G LEE+ L + M+ ++ ++P+ T L+
Sbjct: 408 AMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILV 467
Query: 127 SGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGM----------------- 169
+ N +K E A + +M++ G KP++ TFN L K Y G
Sbjct: 468 QAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKV 527
Query: 170 -------------FAEMGKV------FKEIKACQCSPDIVTWNTLLAVF-GQNGLDSEVS 209
+ E GK+ F +K P++ +N+L+ F N +D V
Sbjct: 528 KPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDG-VG 586
Query: 210 GVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAAL 269
V M+ G P+ TF+TL++A+S G + +Y MLE G+ PD+ ++ +
Sbjct: 587 EVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGY 646
Query: 270 ARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEK 312
AR G E++E++L++M +PN V Y+ ++ + + E +K
Sbjct: 647 ARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKK 689
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 191/425 (44%), Gaps = 57/425 (13%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
++ ++ GL PD FN +I+ ++A+++FE++K +G +P T+N L+ YG
Sbjct: 376 LISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYG 435
Query: 61 K------------------------------------SRRPKEAMEVLKQMESRGFPPSI 84
K R+ +EA ++ +M+S G P +
Sbjct: 436 KIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDV 495
Query: 85 VTYTSLISAYVRDGLLEEALEL-KNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFE 143
VT+ +L AY R G A ++ +M+ +KP+V T T+++G+ K E A+R F
Sbjct: 496 VTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFY 555
Query: 144 EMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNG 203
M+ G PN+ FN+LIK + + +G+V ++ PD+VT++TL+ + G
Sbjct: 556 RMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVG 615
Query: 204 LDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYN 263
++ +M G P+ F+ L Y+R G ++A + +M + GV P++ Y
Sbjct: 616 DMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYT 675
Query: 264 AVLAALARGGLWEQSEKVLSEMENGRC-----KPNEVTYSSLLHAYANGKEFEKMNALAE 318
+++ G +++ +V +M C PN TY +L+ + K+ K L +
Sbjct: 676 QIISGWCSAGEMKKAMQVYKKM----CGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLK 731
Query: 319 EIYSGKITTHAVLLKTLVLVNSKFDFLAEAE--------HAFLEFKKRGIPHDITTLNAM 370
++ + KT+ L+ + + + +F K IP++I + +
Sbjct: 732 DMEGKNVVPTR---KTMQLIADGWKSIGVSNSNDANTLGSSFSTSSKLNIPNNIASSRSP 788
Query: 371 LSLYG 375
L L G
Sbjct: 789 LFLKG 793
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 189/405 (46%), Gaps = 3/405 (0%)
Query: 31 EEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSL 90
+EA +F + G +P ++TY L+ + + + ++ ++E G P + + ++
Sbjct: 336 QEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAI 395
Query: 91 ISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEM-RTAG 149
I+A G L++A+++ +M E KP T+ TL+ G+ K E + R+ + M R
Sbjct: 396 INASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEM 455
Query: 150 CKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVS 209
+PN T N L++ + ++ E + ++++ PD+VT+NTL + + G
Sbjct: 456 LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAE 515
Query: 210 G-VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAA 268
+ M P T T+++ Y G ++A + RM E GV P+L +N+++
Sbjct: 516 DMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKG 575
Query: 269 LARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTH 328
+ +V+ ME KP+ VT+S+L++A+++ + ++ + ++ G I
Sbjct: 576 FLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPD 635
Query: 329 AVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILK 388
L ++ +AE + +K G+ ++ ++S + + K ++ K
Sbjct: 636 IHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYK 695
Query: 389 FMYE-SGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEP 432
M G + +L Y +L++ + K+E +L+++ K + P
Sbjct: 696 KMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVP 740
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 165/364 (45%), Gaps = 12/364 (3%)
Query: 157 FNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMK 216
N LI +RG E +F + P ++T+ TL+ + + + +++
Sbjct: 326 MNGLI----ERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVE 381
Query: 217 RAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWE 276
+ G P+ FN +I+A S G+ DQA ++++M E+G P ST+N ++ + G E
Sbjct: 382 KNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLE 441
Query: 277 QSEKVLSEM-ENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTL 335
+S ++L M + +PN+ T + L+ A+ N ++ E+ + ++ S + V TL
Sbjct: 442 ESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTL 501
Query: 336 VLVNSKFDFLAEAEHAFL-EFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMY--- 391
++ AE + + ++ T +++ Y + K + L+F Y
Sbjct: 502 AKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEE---GKMEEALRFFYRMK 558
Query: 392 ESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMT 451
E G +L +NSL+ + ++ + E G++PD+++++ ++ A+ G M
Sbjct: 559 ELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMK 618
Query: 452 EAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
+ I +M + PD+ ++ YA +A ++ M K G +P+ Y I+
Sbjct: 619 RCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQII 678
Query: 512 DWYC 515
+C
Sbjct: 679 SGWC 682
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 128/281 (45%), Gaps = 37/281 (13%)
Query: 258 DLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALA 317
D+ + ++ L G +++ + + + KP+ +TY++L+ A K F + +L
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 318 EEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRK 377
++ + +L ++ +S+ L +A F + K+ G +T N ++ YG+
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 378 KLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISY 437
+ +++++L +M+LR+ + ++P+ +
Sbjct: 438 GKLEESSRLL-------------------------------DMMLRDEM---LQPNDRTC 463
Query: 438 NIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYA--ANSMFGEAIGVVQCM 495
NI++ A+C K+ EA I+ +M+ PDVVT+NT YA ++ E + ++ M
Sbjct: 464 NILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDM-IIPRM 522
Query: 496 IKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLH 536
+ KP+ T +IV+ YC+ EEA F + + L +H
Sbjct: 523 LHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVH 563
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 416 RKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTF 475
+++ I ++E+G +P LI+Y ++ A R ++++++ PD + +N
Sbjct: 336 QEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAI 395
Query: 476 VATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDL 535
+ + + +A+ + + M + GCKP +T+N+++ Y K+ EE+ LD+
Sbjct: 396 INASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRL------LDM 449
Query: 536 HVSEE---EKGRLLERIAEKWIN 555
+ +E R + + W N
Sbjct: 450 MLRDEMLQPNDRTCNILVQAWCN 472
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/476 (23%), Positives = 214/476 (44%), Gaps = 5/476 (1%)
Query: 29 LYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYT 88
L+EEAL + E+K + PD ++L+ + RR + M SRG P + Y
Sbjct: 147 LFEEALWVSREMKCS---PDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYF 203
Query: 89 SLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTA 148
L + GL + +L ++M IKP+VY YT + K E A ++FE M+
Sbjct: 204 VLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKH 263
Query: 149 GCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEV 208
G PN+ T++A+I Y G + ++KEI + P++V + TL+ F +
Sbjct: 264 GVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTA 323
Query: 209 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAA 268
+F M + G P +N LI + + G+ +A + M ++PD+ TY ++
Sbjct: 324 RSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILING 383
Query: 269 LARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTH 328
L ++ ++ +M+N R P+ TY+SL+H Y E+ L E+ + + +
Sbjct: 384 LCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPN 443
Query: 329 AVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILK 388
+ TL+ + A + E +GI D+ T A++ + ++ + + ++
Sbjct: 444 IITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYS 503
Query: 389 FMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNG 448
M E+G + + L+ + + +E ++ + + + +I C+NG
Sbjct: 504 DMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNG 563
Query: 449 KMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQC-MIKQGCKPD 503
+ A R ++M+ PD+ +Y + + + + + ++QC MIK G P+
Sbjct: 564 YILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTM-MLQCDMIKTGILPN 618
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 101/457 (22%), Positives = 209/457 (45%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M S+GL PD+ + L CC LY + +L +E+ G++P++ Y + + +
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+EA ++ + M+ G P++ TY+++I Y + G + +A L +++ + P+V + T
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
L+ GF A++ A +F M G PN+ +N LI + G E + E+++
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
SPD+ T+ L+ +E + +F++MK P T+N+LI Y + + +QA
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
+ M +GV P++ T++ ++ + + + EM P+ VTY++L+ A+
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAH 489
Query: 305 ANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDI 364
++ L ++ I + LV K L+ A + E ++ +
Sbjct: 490 FKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNH 549
Query: 365 TTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILRE 424
++ + + + ++ M G T + Y S++ H + + + M+ +
Sbjct: 550 VGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCD 609
Query: 425 ILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMK 461
+++ GI P+L+ ++ Y NG + A + N +
Sbjct: 610 MIKTGILPNLLVNQLLARFYQANGYVKSACFLTNSSR 646
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 112/517 (21%), Positives = 215/517 (41%), Gaps = 65/517 (12%)
Query: 24 CRAGSLYEEALELFEEIKLAGLRP--DMVTYNALLDVYGKSRR-------PKEAMEVLKQ 74
CR+ EEA +LFE + + D+ +++A++ V + + K +E LK+
Sbjct: 51 CRSA---EEAFKLFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKR 107
Query: 75 ------MESRGFPP---------SIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
M R F SI ++ LI ++ GL EEAL + +M PD
Sbjct: 108 HSEPSNMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREM---KCSPDS 164
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
++L+G V ++ F+++ + D + G V
Sbjct: 165 KACLSILNGLVRRRR----------------------FDSV---WVDYQLMISRGLV--- 196
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
PD+ + L + GL S+ + EM G P + I R
Sbjct: 197 -------PDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
++A +++ M + GV P+L TY+A++ + G Q+ + E+ PN V + +
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 300 LLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRG 359
L+ + +E +L + + + + L+ + K + EA E +
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 360 IPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSE 419
+ D+ T +++ + VA+ N++ + M S YNSL++ + + N ++
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429
Query: 420 MILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATY 479
+ E+ G+EP++I+++ +I YC + A + EM VPDVVTY + +
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAH 489
Query: 480 AANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
+ EA+ + M++ G P+ +T+ +VD + K
Sbjct: 490 FKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWK 526
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 170/397 (42%), Gaps = 3/397 (0%)
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
K +I F+ LI + + G+F E V +E+K CSPD ++L + V
Sbjct: 129 KFSIGVFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSILNGLVRRRRFDSVWV 185
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
++ M G VP+ + L + G + + + M G+ P++ Y + L
Sbjct: 186 DYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLC 245
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAV 330
R E++EK+ M+ PN TYS+++ Y + L +EI ++ + V
Sbjct: 246 RDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVV 305
Query: 331 LLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFM 390
+ TLV K L A F+ K G+ ++ N ++ + + + + +L M
Sbjct: 306 VFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM 365
Query: 391 YESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKM 450
+ + Y L+ ++ + +++ + I P +YN +I+ YC+ M
Sbjct: 366 ESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNM 425
Query: 451 TEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSI 510
+A + +EM P+++T++T + Y A+G+ M +G PD TY ++
Sbjct: 426 EQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTAL 485
Query: 511 VDWYCKLHLREEAYNFVHNLSSLDLHVSEEEKGRLLE 547
+D + K +EA ++ +H ++ L++
Sbjct: 486 IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVD 522
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 189/403 (46%), Gaps = 22/403 (5%)
Query: 17 FNTLISCCRAGSLYEEALEL---------FEEIKLAGLRPDMVTYNALLDVYGKSRRPKE 67
F+ I C G+L + ++L + EI AG ++ +N L++ + K +
Sbjct: 201 FDVPIRGC--GNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISD 258
Query: 68 AMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLS 127
A +V ++ R P++V++ +LI+ Y + G L+E LK+QM + +PDV+TY+ L++
Sbjct: 259 AQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALIN 318
Query: 128 GFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSP 187
K + A +F+EM G PN F LI + G M + ++++ + P
Sbjct: 319 ALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQP 378
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVY 247
DIV +NTL+ F +NG + M R G P++ T+ TLI + R G + A +
Sbjct: 379 DIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIR 438
Query: 248 KRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG 307
K M + G+ D ++A++ + + G +E+ L EM KP++VTY+ ++ A+
Sbjct: 439 KEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKK 498
Query: 308 KEFEKMNALAEEIYSG----KITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
+ + L +E+ S + T+ VLL L K + A+ G+ D
Sbjct: 499 GDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLC----KLGQMKNADMLLDAMLNIGVVPD 554
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLM 406
T N +L + R A ++K E G L Y S++
Sbjct: 555 DITYNTLLEGHHRH---ANSSKRYIQKPEIGIVADLASYKSIV 594
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 172/360 (47%), Gaps = 5/360 (1%)
Query: 118 DVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVF 177
+VY + L++ F A +VF+E+ +P + +FN LI Y G E ++
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 178 KEIKACQCSPDIVTWNTLL-AVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 236
+++ + PD+ T++ L+ A+ +N +D G+F EM + G +P F TLI +SR
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDG-AHGLFDEMCKRGLIPNDVIFTTLIHGHSR 357
Query: 237 CGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVT 296
G D + Y++ML G+ PD+ YN ++ + G + ++ M +P+++T
Sbjct: 358 NGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKIT 417
Query: 297 YSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFK 356
Y++L+ + G + E + +E+ I V LV K + +AE A E
Sbjct: 418 YTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREML 477
Query: 357 KRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFR 416
+ GI D T M+ + +K K+LK M G S+ YN L+ + +
Sbjct: 478 RAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMK 537
Query: 417 KSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFV 476
++M+L +L G+ PD I+YN ++ + R+ +KR + + + V D+ +Y + V
Sbjct: 538 NADMLLDAMLNIGVVPDDITYNTLLEGHHRHA--NSSKRYIQK-PEIGIVADLASYKSIV 594
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 175/362 (48%), Gaps = 6/362 (1%)
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVY 247
++ +N L+ F + G S+ VF E+ + P +FNTLI+ Y + G+ D+ +
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 248 KRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG 307
+M ++ PD+ TY+A++ AL + + + + EM PN+V +++L+H ++
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 308 KEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTL 367
E + M +++ S + VL TLV K L A + +RG+ D T
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 368 NAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILE 427
++ + R V +I K M ++G L G+++L+ + +E LRE+L
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR 478
Query: 428 KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGE 487
GI+PD ++Y +++ A+C+ G ++L EM+ VP VVTYN +
Sbjct: 479 AGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKN 538
Query: 488 AIGVVQCMIKQGCKPDQNTYNSIVDWY------CKLHLREEAYNFVHNLSSLDLHVSEEE 541
A ++ M+ G PD TYN++++ + K ++++ V +L+S V+E +
Sbjct: 539 ADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEIGIVADLASYKSIVNELD 598
Query: 542 KG 543
+
Sbjct: 599 RA 600
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 155/310 (50%), Gaps = 5/310 (1%)
Query: 4 DMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
++ + L P + +FNTLI+ C+ G+L +E L +++ + RPD+ TY+AL++ K
Sbjct: 265 EITKRSLQPTVVSFNTLINGYCKVGNL-DEGFRLKHQMEKSRTRPDVFTYSALINALCKE 323
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
+ A + +M RG P+ V +T+LI + R+G ++ E +M+ K ++PD+ Y
Sbjct: 324 NKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLY 383
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
TL++GF A + + M G +P+ T+ LI + G ++ KE+
Sbjct: 384 NTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQ 443
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
D V ++ L+ + G + +EM RAG P+ T+ ++ A+ + G
Sbjct: 444 NGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQT 503
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL- 301
+ K M G P + TYN +L L + G + ++ +L M N P+++TY++LL
Sbjct: 504 GFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLE 563
Query: 302 --HAYANGKE 309
H +AN +
Sbjct: 564 GHHRHANSSK 573
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 181/375 (48%), Gaps = 5/375 (1%)
Query: 3 MDMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGK 61
M++ G ++ FN L++ C+ G++ +A ++F+EI L+P +V++N L++ Y K
Sbjct: 229 MEILDAGFPLNVYVFNILMNKFCKEGNI-SDAQKVFDEITKRSLQPTVVSFNTLINGYCK 287
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYT 121
E + QME P + TY++LI+A ++ ++ A L ++M ++ + P+
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI 347
Query: 122 YTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK 181
+TTL+ G + +L +++M + G +P+I +N L+ + G + +
Sbjct: 348 FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407
Query: 182 ACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFD 241
PD +T+ TL+ F + G + KEM + G +R F+ L+ + G
Sbjct: 408 RRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVI 467
Query: 242 QARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL 301
A + ML AG+ PD TY ++ A + G + K+L EM++ P+ VTY+ LL
Sbjct: 468 DAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLL 527
Query: 302 HAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIP 361
+ + + + L + + + + + TL+ + + A + +++ + GI
Sbjct: 528 NGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRH---ANSSKRYIQKPEIGIV 584
Query: 362 HDITTLNAMLSLYGR 376
D+ + ++++ R
Sbjct: 585 ADLASYKSIVNELDR 599
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 176/396 (44%), Gaps = 3/396 (0%)
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTF--NALIKMYGDRGMFAEMGKVFKEIK 181
+L+ V+ K A VF + P +C F +AL+ Y D G + + F+ +
Sbjct: 139 SLIELVVSRKGKNSASSVFISLVEMRVTP-MCGFLVDALMITYTDLGFIPDAIQCFRLSR 197
Query: 182 ACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFD 241
+ I LL + + G + E+ AGF FN L++ + + G+
Sbjct: 198 KHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNIS 257
Query: 242 QARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL 301
A+ V+ + + + P + ++N ++ + G ++ ++ +ME R +P+ TYS+L+
Sbjct: 258 DAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALI 317
Query: 302 HAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIP 361
+A + + + L +E+ + + V+ TL+ +S+ + + ++ + +G+
Sbjct: 318 NALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQ 377
Query: 362 HDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMI 421
DI N +++ + + + I+ M G Y +L+ R + + I
Sbjct: 378 PDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEI 437
Query: 422 LREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAA 481
+E+ + GIE D + ++ ++ C+ G++ +A+R L EM PD VTY + +
Sbjct: 438 RKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCK 497
Query: 482 NSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKL 517
+++ M G P TYN +++ CKL
Sbjct: 498 KGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKL 533
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 115/488 (23%), Positives = 212/488 (43%), Gaps = 48/488 (9%)
Query: 52 YNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMV 111
+N+L+ YG + +E++++ + M+ G PS++T+ SL+S ++ G A +L ++M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 112 EKH-IKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMF 170
+ + PD YT+ TL++GF + A R+F++M C P++ T+N +I G
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 171 AEMGKVFKEI--KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFN 228
V + KA P++V++ TL+ + E VF +M G P T+N
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 229 TLISAYSRCGSFDQARAVYKRMLEAGVT--PDLSTYNAVLAALARGGLWEQSEKVLSEME 286
TLI S +D+ + + +A T PD T+N ++ A G + + KV EM
Sbjct: 321 TLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEML 380
Query: 287 NGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLV-NSKFDFL 345
N + P+ +YS L+ EF++ L E++ ++ K L N F++L
Sbjct: 381 NMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYL 440
Query: 346 A------EAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSL 399
+AE F + KRG+
Sbjct: 441 CANGKTKQAEKVFRQLMKRGVQDP------------------------------------ 464
Query: 400 PGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNE 459
P Y +L+ H R F+ + +L +L + PDL +Y ++I + G+ A L
Sbjct: 465 PSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQR 524
Query: 460 MKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHL 519
M + +P T+++ +A A E+ +V M+++ + + + +V
Sbjct: 525 MLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQ 584
Query: 520 REEAYNFV 527
+E+A+ V
Sbjct: 585 KEKAFLIV 592
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 128/529 (24%), Positives = 242/529 (45%), Gaps = 61/529 (11%)
Query: 19 TLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESR 78
T++ R + + L F+ + G ++ +L+ G++R A L +E R
Sbjct: 70 TVLQTLRLIKVPADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERR 129
Query: 79 GFPPSIVT---YTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKD 135
+ + SLI +Y GL +E+++L M + I P V T+ +LLS + +
Sbjct: 130 SNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRT 189
Query: 136 ELAMRVFEEMR-TAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNT 194
+A +F+EMR T G P+ TFN LI + M E ++FK+++ C+PD+VT+NT
Sbjct: 190 GMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNT 249
Query: 195 LLAVFGQNG----LDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRM 250
++ + G + +SG+ K K P ++ TL+ Y D+A V+ M
Sbjct: 250 IIDGLCRAGKVKIAHNVLSGMLK--KATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDM 307
Query: 251 LEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENG--RCKPNEVTYSSLLHAYANGK 308
L G+ P+ TYN ++ L+ +++ + +L + P+ T++ L+ A+ +
Sbjct: 308 LSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAG 367
Query: 309 EFEKMNALAEEIYSGKI----TTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDI 364
+ + +E+ + K+ +++VL++TL + N +FD AE F E ++ +
Sbjct: 368 HLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRN-EFD---RAETLFNELFEKEV---- 419
Query: 365 TTLNAMLSLYGR---KKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMI 421
L G+ K L A N + +++ +G T +++E +
Sbjct: 420 --------LLGKDECKPLAAAYNPMFEYLCANGKT-------------------KQAEKV 452
Query: 422 LREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAA 481
R+++++G++ D SY +I +CR GK A +L M VPD+ TY +
Sbjct: 453 FRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLK 511
Query: 482 NSMFGEAI---GVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFV 527
GEA+ +Q M++ P T++S++ K E++ V
Sbjct: 512 ---IGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLV 557
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 120/517 (23%), Positives = 233/517 (45%), Gaps = 28/517 (5%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLA-GLRPDMVTYNALLDVY 59
+ MK G++P + TFN+L+S A +LF+E++ G+ PD T+N L++ +
Sbjct: 160 LFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGF 219
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEK--HIKP 117
K+ EA + K ME P +VTY ++I R G ++ A + + M++K + P
Sbjct: 220 CKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHP 279
Query: 118 DVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVF 177
+V +YTTL+ G+ ++ + A+ VF +M + G KPN T+N LIK + + E+ +
Sbjct: 280 NVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDIL 339
Query: 178 --KEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYS 235
+PD T+N L+ G VF+EM P+ +++ LI
Sbjct: 340 IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLC 399
Query: 236 RCGSFDQARAVYKRMLEAGV-------TPDLSTYNAVLAALARGGLWEQSEKVLSE-MEN 287
FD+A ++ + E V P + YN + L G +Q+EKV + M+
Sbjct: 400 MRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKR 459
Query: 288 GRCKPNEVTYSSLLHAYANGKEF----EKMNALAEEIYSGKITTHAVLLKTLVLVNSKFD 343
G P +Y +L+ + +F E + + + + T+ +L+ L+ +
Sbjct: 460 GVQDPP--SYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGE--- 514
Query: 344 FLAEAEHAFLEFKKRGIPHDI-TTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGY 402
A H L+ R + TT +++L+ ++K ++ ++ M E ++
Sbjct: 515 --ALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLS 572
Query: 403 NSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKD 462
++ L + K+ +I+R + + G L+ ++ C N K+ +A ++ +
Sbjct: 573 TQVVRLLFSSAQKEKAFLIVRLLYDNGY---LVKMEELLGYLCENRKLLDAHTLVLFCLE 629
Query: 463 PAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQG 499
+ + D+ T NT + + EA + +++ G
Sbjct: 630 KSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELG 666
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 10/222 (4%)
Query: 321 YSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGR-KKL 379
+ + + +L+TL L+ D L F +G H + ML GR + L
Sbjct: 61 HPSQTISRTTVLQTLRLIKVPADGL----RFFDWVSNKGFSHKEQSFFLMLEFLGRARNL 116
Query: 380 VAKTNKILKFMYESGFTLSLPG--YNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISY 437
N + S + L +NSL+ + F++S + + + + GI P ++++
Sbjct: 117 NVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTF 176
Query: 438 NIVIYAYCRNGKMTEAKRILNEMKDPAPV-PDVVTYNTFVATYAANSMFGEAIGVVQCMI 496
N ++ + G+ A + +EM+ V PD T+NT + + NSM EA + + M
Sbjct: 177 NSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDME 236
Query: 497 KQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL--SSLDLH 536
C PD TYN+I+D C+ + A+N + + + D+H
Sbjct: 237 LYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVH 278
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 3/169 (1%)
Query: 367 LNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLM-YLHSRTRNFRKSEMILREI 425
N+++ YG L ++ K+ + M + G + S+ +NSL+ L R R ++
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 426 LEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMF 485
G+ PD ++N +I +C+N + EA RI +M+ PDVVTYNT +
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 486 GEAIGVVQCMIKQG--CKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSS 532
A V+ M+K+ P+ +Y ++V YC +EA H++ S
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLS 309
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 190/401 (47%), Gaps = 1/401 (0%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
++S GL P L L++ L + ++F+++ G+ ++ YN L+ KS
Sbjct: 159 IRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGD 218
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
P++A ++L +ME +G P I TY +LIS Y + + EAL ++++M + P++ TY +
Sbjct: 219 PEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNS 278
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
+ GF + A R+F E++ N T+ LI Y E ++ + +++
Sbjct: 279 FIHGFSREGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRG 337
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
SP +VT+N++L ++G E + + EM P+ T NTLI+AY + A
Sbjct: 338 FSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAV 397
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
V K+M+E+G+ D+ +Y A++ + E +++ L M P TYS L+ +
Sbjct: 398 KVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGF 457
Query: 305 ANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDI 364
N + +++ L EE + L + L+ K + + A+ F +K+G+ D
Sbjct: 458 YNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDS 517
Query: 365 TTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSL 405
M Y R V + + + MY ++L Y S+
Sbjct: 518 VIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSI 558
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 109/468 (23%), Positives = 221/468 (47%), Gaps = 24/468 (5%)
Query: 51 TYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQM 110
++ L+ Y K+ +++ V +Q+ S G P + T L+++ V+ L + ++ +M
Sbjct: 135 VFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKM 194
Query: 111 VEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMF 170
V+ + +++ Y L+ + E A ++ EM G P+I T+N LI +Y + M
Sbjct: 195 VKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMH 254
Query: 171 AEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTL 230
E V ++ +P+IVT+N+ + F + G E + +F+E+K T+ TL
Sbjct: 255 FEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK-DDVTANHVTYTTL 313
Query: 231 ISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRC 290
I Y R D+A + + M G +P + TYN++L L G ++ ++L+EM +
Sbjct: 314 IDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKI 373
Query: 291 KPNEVTYSSLLHAYANGKEF-------EKM--NALAEEIYSGKITTHAVLLKTLVLVNSK 341
+P+ +T ++L++AY ++ +KM + L ++YS K H K L L N+K
Sbjct: 374 EPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHG-FCKVLELENAK 432
Query: 342 FDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPG 401
+ + E +G T + ++ + + + K+L+ + G +
Sbjct: 433 EELFSMIE--------KGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVAL 484
Query: 402 YNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMK 461
Y L+ + ++++ + +KG+ D + + + YAY R GK+TEA + + M
Sbjct: 485 YRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMY 544
Query: 462 DPAPVPDVVTYNTFVATYAANS----MFGEAIGVVQCMIKQGCKPDQN 505
+ + ++ Y + A+YA ++ F +G +C+I + + N
Sbjct: 545 NRRLMVNLKLYKSISASYAGDNDVLRFFWSHVG-DRCLISKSILREMN 591
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 178/397 (44%), Gaps = 1/397 (0%)
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
+ ++ L+ + A ++ VFE++R+ G KP++ L+ + + + K+FK+
Sbjct: 134 HVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKK 193
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+ +I +N L+ ++G + + EM+ G P+ T+NTLIS Y +
Sbjct: 194 MVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSM 253
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
+A +V RM +GV P++ TYN+ + +R G ++ ++ E+++ N VTY++
Sbjct: 254 HFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDD-VTANHVTYTT 312
Query: 300 LLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRG 359
L+ Y + ++ L E + S + V +++ + + EA E +
Sbjct: 313 LIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKK 372
Query: 360 IPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSE 419
I D T N +++ Y + + + K+ K M ESG L + Y +L++ + ++
Sbjct: 373 IEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAK 432
Query: 420 MILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATY 479
L ++EKG P +Y+ ++ + K E ++L E + DV Y +
Sbjct: 433 EELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRI 492
Query: 480 AANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
A + + M K+G D + ++ Y +
Sbjct: 493 CKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWR 529
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 161/362 (44%), Gaps = 1/362 (0%)
Query: 156 TFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEM 215
F+ L+ Y GM + VF++I++C P + LL + L V +FK+M
Sbjct: 135 VFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKM 194
Query: 216 KRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLW 275
+ G V +N L+ A S+ G ++A + M E GV PD+ TYN +++ + +
Sbjct: 195 VKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMH 254
Query: 276 EQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTL 335
++ V ME PN VTY+S +H ++ + L EI +T + V TL
Sbjct: 255 FEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYTTL 313
Query: 336 VLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGF 395
+ + + + EA + RG + T N++L + + N++L M
Sbjct: 314 IDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKI 373
Query: 396 TLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKR 455
N+L+ + + + + + ++++E G++ D+ SY +I+ +C+ ++ AK
Sbjct: 374 EPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKE 433
Query: 456 ILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYC 515
L M + P TY+ V + + E +++ K+G D Y ++ C
Sbjct: 434 ELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRIC 493
Query: 516 KL 517
KL
Sbjct: 494 KL 495
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 159/351 (45%), Gaps = 50/351 (14%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +M+ +G+ PD+ T+NTLIS S++ EAL + + ++ +G+ P++VTYN+ + +
Sbjct: 225 LLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFS 284
Query: 61 KSRRPKEAMEVLKQ----------------------------------MESRGFPPSIVT 86
+ R +EA + ++ MESRGF P +VT
Sbjct: 285 REGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVT 344
Query: 87 YTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMR 146
Y S++ DG + EA L +M K I+PD T TL++ + + A++V ++M
Sbjct: 345 YNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMI 404
Query: 147 TAGCKPNICTFNALIKMY--------GDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAV 198
+G K ++ ++ ALI + +F+ + K F SP T++ L+
Sbjct: 405 ESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGF--------SPGYATYSWLVDG 456
Query: 199 FGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPD 258
F E++ + +E ++ G + + LI + D A+ +++ M + G+ D
Sbjct: 457 FYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGD 516
Query: 259 LSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKE 309
+ + A R G ++ + M N R N Y S+ +YA +
Sbjct: 517 SVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASYAGDND 567
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 146/308 (47%), Gaps = 7/308 (2%)
Query: 225 ETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSE 284
F+ L+ Y++ G + + V++++ G+ P L +L +L + L + K+ +
Sbjct: 134 HVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKK 193
Query: 285 MENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDF 344
M N Y+ L+HA + + EK L E+ + TL+ V K
Sbjct: 194 MVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSM 253
Query: 345 LAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNS 404
EA ++ G+ +I T N+ + + R+ + + ++ + + + T + Y +
Sbjct: 254 HFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYTT 312
Query: 405 LMYLHSRTRNFRKSEMILREILE-KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDP 463
L+ + R + ++ + LRE++E +G P +++YN ++ C +G++ EA R+L EM
Sbjct: 313 LIDGYCRMNDIDEA-LRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGK 371
Query: 464 APVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKL----HL 519
PD +T NT + Y A+ V + MI+ G K D +Y +++ +CK+ +
Sbjct: 372 KIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENA 431
Query: 520 REEAYNFV 527
+EE ++ +
Sbjct: 432 KEELFSMI 439
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 11/231 (4%)
Query: 292 PNEVT--YSSLLHAYANGKEFEKMNALAEEIYSGKITTH----AVLLKTLVLVNSKFDFL 345
P +V+ +S L+ YA + E+I S + H VLL +LV K
Sbjct: 129 PEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLV----KQRLT 184
Query: 346 AEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSL 405
F + K G+ +I N ++ + K K+L M E G + YN+L
Sbjct: 185 DTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTL 244
Query: 406 MYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAP 465
+ ++ + ++ + + G+ P++++YN I+ + R G+M EA R+ E+KD
Sbjct: 245 ISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDV- 303
Query: 466 VPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
+ VTY T + Y + EA+ + + M +G P TYNSI+ C+
Sbjct: 304 TANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCE 354
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/486 (24%), Positives = 209/486 (43%), Gaps = 39/486 (8%)
Query: 31 EEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSL 90
E+ + L G+ P+ V + K+ R A ++L + P + +L
Sbjct: 241 EKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNAL 300
Query: 91 ISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
+S R+ + +L +M E I+PDV T L++ +++ + A+ VFE+MR
Sbjct: 301 LSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR---- 356
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
G + G V K D + +NTL+ + G E
Sbjct: 357 -----------------GKRTDDGNVIK--------ADSIHFNTLIDGLCKVGRLKEAEE 391
Query: 211 VFKEMK-RAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAAL 269
+ MK VP T+N LI Y R G + A+ V RM E + P++ T N ++ +
Sbjct: 392 LLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGM 451
Query: 270 ARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHA 329
R + +ME K N VTY +L+HA + EK E++ + A
Sbjct: 452 CRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDA 511
Query: 330 ----VLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNK 385
L+ L V D + E + K+ G D+ N ++ L+ K K +
Sbjct: 512 KIYYALISGLCQVRRDHDAIRVVE----KLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYE 567
Query: 386 ILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYC 445
+L M + G YN+L+ + ++F E ++ ++ E G++P + +Y VI AYC
Sbjct: 568 MLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC 627
Query: 446 RNGKMTEAKRILNEMKDPAPV-PDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQ 504
G++ EA ++ +M + V P+ V YN + ++ FG+A+ + + M + +P+
Sbjct: 628 SVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNV 687
Query: 505 NTYNSI 510
TYN++
Sbjct: 688 ETYNAL 693
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 165/323 (51%), Gaps = 4/323 (1%)
Query: 1 MLMDMK-SQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDV 58
+L+ MK + P+ T+N LI CRAG L E A E+ +K ++P++VT N ++
Sbjct: 392 LLVRMKLEERCVPNAVTYNCLIDGYCRAGKL-ETAKEVVSRMKEDEIKPNVVTVNTIVGG 450
Query: 59 YGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPD 118
+ A+ ME G ++VTY +LI A +E+A+ +M+E PD
Sbjct: 451 MCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPD 510
Query: 119 VYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFK 178
Y L+SG ++D A+RV E+++ G ++ +N LI ++ D+ ++ ++
Sbjct: 511 AKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLT 570
Query: 179 EIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 238
+++ PD +T+NTL++ FG++ V + ++M+ G P T+ +I AY G
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVG 630
Query: 239 SFDQARAVYKRM-LEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTY 297
D+A ++K M L + V P+ YN ++ A ++ G + Q+ + EM+ +PN TY
Sbjct: 631 ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
Query: 298 SSLLHAYANGKEFEKMNALAEEI 320
++L + E + L +E+
Sbjct: 691 NALFKCLNEKTQGETLLKLMDEM 713
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/511 (19%), Positives = 222/511 (43%), Gaps = 13/511 (2%)
Query: 31 EEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSL 90
++ L L+E K + +V L+ +G+ +++ V ++++S + +
Sbjct: 134 DKLLRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMKNSQV--RNVV 191
Query: 91 ISAYVRDGLLEEALELKNQMVEKH--IKPDVYTYTTLLSGFVNAK--KDELAMRVFEEMR 146
+ +R+GL+++A ++ ++M++K P+ T +L + +E + +
Sbjct: 192 VDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFS 251
Query: 147 TAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDS 206
+ G PN I + ++ + + +N LL+ G+N S
Sbjct: 252 SHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDIS 311
Query: 207 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRM----LEAG--VTPDLS 260
++ + +M P+ T LI+ + D+A V+++M + G + D
Sbjct: 312 RMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSI 371
Query: 261 TYNAVLAALARGGLWEQSEKVLSEME-NGRCKPNEVTYSSLLHAYANGKEFEKMNALAEE 319
+N ++ L + G +++E++L M+ RC PN VTY+ L+ Y + E +
Sbjct: 372 HFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSR 431
Query: 320 IYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKL 379
+ +I + V + T+V + L A F++ +K G+ ++ T ++
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 380 VAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNI 439
V K + M E+G + Y +L+ + R + ++ ++ E G DL++YN+
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 440 VIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQG 499
+I +C + +L +M+ PD +TYNT ++ + + F +++ M + G
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 500 CKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
P TY +++D YC + +EA ++
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/417 (20%), Positives = 175/417 (41%), Gaps = 18/417 (4%)
Query: 134 KDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWN 193
+D+L +R++E + I LI+ +G GM + V++ + + + + N
Sbjct: 133 RDKL-LRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMKNSQV--RN 189
Query: 194 TLLAVFGQNGLDSEVSGVFKEM--KRAGFVPERETFNTLISAY--SRCGSFDQARAVYKR 249
++ V +NGL + V EM K + F P R T + ++ R + ++ A+ R
Sbjct: 190 VVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISR 249
Query: 250 MLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKE 309
GV+P+ +++L + + +LS++ + +++LL +
Sbjct: 250 FSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMD 309
Query: 310 FEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRG------IPHD 363
+MN L ++ KI V L L+ K + EA F + + + I D
Sbjct: 310 ISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKAD 369
Query: 364 ITTLNAMLS-LYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMIL 422
N ++ L +L +++ E + YN L+ + R ++ ++
Sbjct: 370 SIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVV 429
Query: 423 REILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAAN 482
+ E I+P++++ N ++ CR+ + A +M+ +VVTY T + +
Sbjct: 430 SRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSV 489
Query: 483 SMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLS----SLDL 535
S +A+ + M++ GC PD Y +++ C++ +A V L SLDL
Sbjct: 490 SNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDL 546
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKL-AGLRPDMVTYNALLDV 58
M+ M+ GL P + T+ +I C G L +EAL+LF+++ L + + P+ V YN L++
Sbjct: 603 MMEQMREDGLDPTVTTYGAVIDAYCSVGEL-DEALKLFKDMGLHSKVNPNTVIYNILINA 661
Query: 59 YGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVE 112
+ K +A+ + ++M+ + P++ TY +L E L+L ++MVE
Sbjct: 662 FSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/486 (24%), Positives = 209/486 (43%), Gaps = 39/486 (8%)
Query: 31 EEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSL 90
E+ + L G+ P+ V + K+ R A ++L + P + +L
Sbjct: 241 EKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNAL 300
Query: 91 ISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
+S R+ + +L +M E I+PDV T L++ +++ + A+ VFE+MR
Sbjct: 301 LSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR---- 356
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
G + G V K D + +NTL+ + G E
Sbjct: 357 -----------------GKRTDDGNVIK--------ADSIHFNTLIDGLCKVGRLKEAEE 391
Query: 211 VFKEMK-RAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAAL 269
+ MK VP T+N LI Y R G + A+ V RM E + P++ T N ++ +
Sbjct: 392 LLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGM 451
Query: 270 ARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHA 329
R + +ME K N VTY +L+HA + EK E++ + A
Sbjct: 452 CRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDA 511
Query: 330 ----VLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNK 385
L+ L V D + E + K+ G D+ N ++ L+ K K +
Sbjct: 512 KIYYALISGLCQVRRDHDAIRVVE----KLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYE 567
Query: 386 ILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYC 445
+L M + G YN+L+ + ++F E ++ ++ E G++P + +Y VI AYC
Sbjct: 568 MLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC 627
Query: 446 RNGKMTEAKRILNEMKDPAPV-PDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQ 504
G++ EA ++ +M + V P+ V YN + ++ FG+A+ + + M + +P+
Sbjct: 628 SVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNV 687
Query: 505 NTYNSI 510
TYN++
Sbjct: 688 ETYNAL 693
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 171/339 (50%), Gaps = 4/339 (1%)
Query: 1 MLMDMK-SQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDV 58
+L+ MK + P+ T+N LI CRAG L E A E+ +K ++P++VT N ++
Sbjct: 392 LLVRMKLEERCVPNAVTYNCLIDGYCRAGKL-ETAKEVVSRMKEDEIKPNVVTVNTIVGG 450
Query: 59 YGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPD 118
+ A+ ME G ++VTY +LI A +E+A+ +M+E PD
Sbjct: 451 MCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPD 510
Query: 119 VYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFK 178
Y L+SG ++D A+RV E+++ G ++ +N LI ++ D+ ++ ++
Sbjct: 511 AKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLT 570
Query: 179 EIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 238
+++ PD +T+NTL++ FG++ V + ++M+ G P T+ +I AY G
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVG 630
Query: 239 SFDQARAVYKRM-LEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTY 297
D+A ++K M L + V P+ YN ++ A ++ G + Q+ + EM+ +PN TY
Sbjct: 631 ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
Query: 298 SSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLV 336
++L + E + L +E+ + + ++ L+
Sbjct: 691 NALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILM 729
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/512 (22%), Positives = 224/512 (43%), Gaps = 51/512 (9%)
Query: 7 SQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPK 66
S G++P+ IS + A ++ ++ + +NALL G++
Sbjct: 252 SHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDIS 311
Query: 67 EAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKH------IKPDVY 120
+++ +M+ P +VT LI+ + ++EALE+ QM K IK D
Sbjct: 312 RMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSI 371
Query: 121 TYTTLLSGFVNAKK----DELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKV 176
+ TL+ G + +EL +R+ E R C PN T+N LI Y G +V
Sbjct: 372 HFNTLIDGLCKVGRLKEAEELLVRMKLEER---CVPNAVTYNCLIDGYCRAGKLETAKEV 428
Query: 177 FKEIKACQCSPDIVTWNTLL-AVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYS 235
+K + P++VT NT++ + +GL+ V F +M++ G T+ TLI A
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV-FFMDMEKEGVKGNVVTYMTLIHACC 487
Query: 236 RCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEV 295
+ ++A Y++MLEAG +PD Y A+++ L + + +V+ +++ G + +
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLL 547
Query: 296 TYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEF 355
Y+ L+ + + EK+ ++ L + E
Sbjct: 548 AYNMLIGLFCDKNNAEKV----------------------------YEMLTDME------ 573
Query: 356 KKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNF 415
K G D T N ++S +G+ K ++++ M E G ++ Y +++ +
Sbjct: 574 -KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGEL 632
Query: 416 RKSEMILREI-LEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNT 474
++ + +++ L + P+ + YNI+I A+ + G +A + EMK P+V TYN
Sbjct: 633 DEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNA 692
Query: 475 FVATYAANSMFGEAIGVVQCMIKQGCKPDQNT 506
+ + ++ M++Q C+P+Q T
Sbjct: 693 LFKCLNEKTQGETLLKLMDEMVEQSCEPNQIT 724
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 132/270 (48%), Gaps = 1/270 (0%)
Query: 2 LMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGK 61
MDM+ +G+ ++ T+ TLI C + S E+A+ +E++ AG PD Y AL+ +
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYT 121
RR +A+ V+++++ GF ++ Y LI + E+ E+ M ++ KPD T
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSIT 583
Query: 122 YTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK 181
Y TL+S F K E R+ E+MR G P + T+ A+I Y G E K+FK++
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 182 A-CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ +P+ V +N L+ F + G + + +EMK P ET+N L +
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQG 703
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
+ + M+E P+ T ++ L+
Sbjct: 704 ETLLKLMDEMVEQSCEPNQITMEILMERLS 733
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/511 (19%), Positives = 222/511 (43%), Gaps = 13/511 (2%)
Query: 31 EEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSL 90
++ L L+E K + +V L+ +G+ +++ V ++++S + +
Sbjct: 134 DKLLRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMKNSQV--RNVV 191
Query: 91 ISAYVRDGLLEEALELKNQMVEKH--IKPDVYTYTTLLSGFVNAK--KDELAMRVFEEMR 146
+ +R+GL+++A ++ ++M++K P+ T +L + +E + +
Sbjct: 192 VDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFS 251
Query: 147 TAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDS 206
+ G PN I + ++ + + +N LL+ G+N S
Sbjct: 252 SHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDIS 311
Query: 207 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRM----LEAG--VTPDLS 260
++ + +M P+ T LI+ + D+A V+++M + G + D
Sbjct: 312 RMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSI 371
Query: 261 TYNAVLAALARGGLWEQSEKVLSEME-NGRCKPNEVTYSSLLHAYANGKEFEKMNALAEE 319
+N ++ L + G +++E++L M+ RC PN VTY+ L+ Y + E +
Sbjct: 372 HFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSR 431
Query: 320 IYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKL 379
+ +I + V + T+V + L A F++ +K G+ ++ T ++
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 380 VAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNI 439
V K + M E+G + Y +L+ + R + ++ ++ E G DL++YN+
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 440 VIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQG 499
+I +C + +L +M+ PD +TYNT ++ + + F +++ M + G
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 500 CKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
P TY +++D YC + +EA ++
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
ML DM+ +G PD T+NTLIS +E + E+++ GL P + TY A++D Y
Sbjct: 568 MLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC 627
Query: 61 KSRRPKEAMEVLKQMESRG-FPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
EA+++ K M P+ V Y LI+A+ + G +AL LK +M K ++P+V
Sbjct: 628 SVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNV 687
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIK 162
TY L + E +++ +EM C+PN T L++
Sbjct: 688 ETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILME 730
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/417 (20%), Positives = 175/417 (41%), Gaps = 18/417 (4%)
Query: 134 KDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWN 193
+D+L +R++E + I LI+ +G GM + V++ + + + + N
Sbjct: 133 RDKL-LRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMKNSQV--RN 189
Query: 194 TLLAVFGQNGLDSEVSGVFKEM--KRAGFVPERETFNTLISAY--SRCGSFDQARAVYKR 249
++ V +NGL + V EM K + F P R T + ++ R + ++ A+ R
Sbjct: 190 VVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISR 249
Query: 250 MLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKE 309
GV+P+ +++L + + +LS++ + +++LL +
Sbjct: 250 FSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMD 309
Query: 310 FEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRG------IPHD 363
+MN L ++ KI V L L+ K + EA F + + + I D
Sbjct: 310 ISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKAD 369
Query: 364 ITTLNAMLS-LYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMIL 422
N ++ L +L +++ E + YN L+ + R ++ ++
Sbjct: 370 SIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVV 429
Query: 423 REILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAAN 482
+ E I+P++++ N ++ CR+ + A +M+ +VVTY T + +
Sbjct: 430 SRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSV 489
Query: 483 SMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLS----SLDL 535
S +A+ + M++ GC PD Y +++ C++ +A V L SLDL
Sbjct: 490 SNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDL 546
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 165/355 (46%), Gaps = 5/355 (1%)
Query: 2 LMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGK 61
+D + D +F+ I L+ L ++ + P T+ + + Y
Sbjct: 79 FLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYAS 138
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYT 121
+ +P +A+++ M G + ++ +++ + +E+A EL + + D T
Sbjct: 139 AGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL-FRALRGRFSVDTVT 197
Query: 122 YTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK 181
Y +L+G+ K+ A+ V +EM G PN+ T+N ++K + G + F E+K
Sbjct: 198 YNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMK 257
Query: 182 ACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFD 241
C D+VT+ T++ FG G VF EM R G +P T+N +I + + +
Sbjct: 258 KRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVE 317
Query: 242 QARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL 301
A +++ M+ G P+++TYN ++ L G + + E+++ MEN C+PN TY+ ++
Sbjct: 318 NAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMI 377
Query: 302 HAYANGKEFEKMNALAEEIYSG----KITTHAVLLKTLVLVNSKFDFLAEAEHAF 352
Y+ E EK L E++ SG + T+ +L+ + + D + AF
Sbjct: 378 RYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQAF 432
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 142/269 (52%), Gaps = 1/269 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ ++M G DL +FNT++ E+A ELF ++ D VTYN +L+ +
Sbjct: 148 LFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR-GRFSVDTVTYNVILNGWC 206
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+R +A+EVLK+M RG P++ TY +++ + R G + A E +M ++ + DV
Sbjct: 207 LIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVV 266
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TYTT++ GF A + + A VF+EM G P++ T+NA+I++ + +F+E+
Sbjct: 267 TYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEM 326
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
P++ T+N L+ G S + + M+ G P +T+N +I YS C
Sbjct: 327 VRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEV 386
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAAL 269
++A ++++M P+L TYN +++ +
Sbjct: 387 EKALGLFEKMGSGDCLPNLDTYNILISGM 415
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 162/342 (47%), Gaps = 6/342 (1%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
++ M+S + P TF + + ++A++LF + G D+ ++N +LDV
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
KS+R ++A E+ + + R F VTY +++ + +ALE+ +MVE+ I P++
Sbjct: 173 KSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY T+L GF A + A F EM+ C+ ++ T+ ++ +G G VF E+
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
P + T+N ++ V + +F+EM R G+ P T+N LI G F
Sbjct: 292 IREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEF 351
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
+ + +RM G P+ TYN ++ + E++ + +M +G C PN TY+ L
Sbjct: 352 SRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNIL 411
Query: 301 LHAYANGKEFEKM-----NALAEEIYSGKITTHAVLLKTLVL 337
+ K E M A A+EI + + + LL+ L
Sbjct: 412 ISGMFVRKRSEDMVVAGNQAFAKEILRLQSKSGSRLLRKFRL 453
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 166/370 (44%), Gaps = 11/370 (2%)
Query: 146 RTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLD 205
+T PN+ N+++K + G A F + + D +++ + + + L
Sbjct: 50 KTTPWTPNLV--NSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLH 107
Query: 206 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAV 265
V + M+ P +TF + Y+ G D+A ++ M E G DL+++N +
Sbjct: 108 PTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTI 167
Query: 266 LAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA----NGKEFEKMNALAEEIY 321
L L + E++ ++ + GR + VTY+ +L+ + K E + + E
Sbjct: 168 LDVLCKSKRVEKAYELFRALR-GRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGI 226
Query: 322 SGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVA 381
+ +TT+ +LK + A FLE KKR D+ T ++ +G +
Sbjct: 227 NPNLTTYNTMLKGFFRAGQ----IRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIK 282
Query: 382 KTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVI 441
+ + M G S+ YN+++ + + N + ++ E++ +G EP++ +YN++I
Sbjct: 283 RARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLI 342
Query: 442 YAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCK 501
G+ + + ++ M++ P+ TYN + Y+ S +A+G+ + M C
Sbjct: 343 RGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCL 402
Query: 502 PDQNTYNSIV 511
P+ +TYN ++
Sbjct: 403 PNLDTYNILI 412
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 147/337 (43%), Gaps = 36/337 (10%)
Query: 141 VFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFG 200
+ MR+ P+ TF + + Y G + K+F + C D+ ++NT+L V
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 201 QNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLS 260
++ + +F+ + R F + T+N +++ + +A V K M+E G+ P+L+
Sbjct: 173 KSKRVEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 261 TYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEI 320
TYN +L R G + + EM+ C+ + VTY++++H + E ++
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKR-------- 283
Query: 321 YSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLV 380
A + F E + G+ + T NAM+ + +K V
Sbjct: 284 ---------------------------ARNVFDEMIREGVLPSVATYNAMIQVLCKKDNV 316
Query: 381 AKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIV 440
+ + M G+ ++ YN L+ F + E +++ + +G EP+ +YN++
Sbjct: 317 ENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMM 376
Query: 441 IYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVA 477
I Y ++ +A + +M +P++ TYN ++
Sbjct: 377 IRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILIS 413
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 184/386 (47%), Gaps = 15/386 (3%)
Query: 1 MLMDMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L +M+S+G +P +N LI C+ G L +L + + L G P+ VTYN L+
Sbjct: 244 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDL-TRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
+ +A+ +L++M S P+ VTY +LI+ V+ +A+ L + M E+ +
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
+ Y+ L+SG K E AM ++ +M GCKPNI ++ L+ G E ++
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNR 422
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+ A C P+ T+++L+ F + GL E V+KEM + G + ++ LI G
Sbjct: 423 MIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGR 482
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM---ENGRCKPNEVT 296
+A V+ +ML G+ PD Y++++ L G + + K+ EM E + +P+ VT
Sbjct: 483 VKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVT 542
Query: 297 YSSLLHAYANGKEFEK----MNALAEEIYSGKITTHAVLLKTLVLVNSKFD----FLAEA 348
Y+ LL K+ + +N++ + + T L TL ++ D FL E
Sbjct: 543 YNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEEL 602
Query: 349 EHAFLEFKKRGIPHDITTLNAMLSLY 374
L K++ + T + ML Y
Sbjct: 603 VVRLL--KRQRVSGACTIVEVMLGKY 626
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 216/474 (45%), Gaps = 16/474 (3%)
Query: 51 TYNALLDVYGKSRRPKEAMEVLKQM-ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQ 109
++ + YGK+ P +A+++ +M + S+ ++ S+++ + +GL LE +
Sbjct: 114 SFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDY 173
Query: 110 MVEKH----IKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYG 165
+V + I P+ ++ ++ + + A+ VF M C P+ T+ L+
Sbjct: 174 VVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLC 233
Query: 166 DRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERE 225
E + E+++ CSP V +N L+ + G + V+ + M G VP
Sbjct: 234 KEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEV 293
Query: 226 TFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM 285
T+NTLI G D+A ++ +RM+ + P+ TY ++ L + + ++LS M
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSM 353
Query: 286 ENGRCKPNEVTYSSLLHA-YANGKEFEKMN---ALAEEIYSGKITTHAVLLKTLVLVNSK 341
E N+ YS L+ + GK E M+ +AE+ I ++VL+ L
Sbjct: 354 EERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKP 413
Query: 342 FDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPG 401
EA+ G + T ++++ + + L + ++ K M ++G + +
Sbjct: 414 ----NEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFC 469
Query: 402 YNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEM- 460
Y+ L+ +++ M+ ++L GI+PD ++Y+ +I C G M A ++ +EM
Sbjct: 470 YSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529
Query: 461 --KDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
++P PDVVTYN + A+ ++ M+ +GC PD T N+ ++
Sbjct: 530 CQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLN 583
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/527 (21%), Positives = 223/527 (42%), Gaps = 59/527 (11%)
Query: 16 TFNTLISCCRAGSLYEEALELFEEIKLAGLR----PDMVTYNALLDVYGKSRRPKEAMEV 71
+FN++++ LY LE ++ + + + P+ +++N ++ K R A+EV
Sbjct: 150 SFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEV 209
Query: 72 LKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVN 131
+ M R P TY +L+ ++ ++EA+ L ++M + P Y L+ G
Sbjct: 210 FRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCK 269
Query: 132 AKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVT 191
++ + M GC PN T+N LI +G + + + + + +C P+ VT
Sbjct: 270 KGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVT 329
Query: 192 WNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRML 251
+ TL+ + ++ + M+ G+ + ++ LIS + G ++A +++++M
Sbjct: 330 YGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMA 389
Query: 252 EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE 311
E G P++ Y+ ++ L R G +++++L+ M C PN TYSSL+ + E
Sbjct: 390 EKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCE 449
Query: 312 KMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAML 371
+ + +E+ + + L+ + EA + + GI D ++++
Sbjct: 450 EAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSII 509
Query: 372 -SLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGI 430
L G + + LK + EM+ +E E
Sbjct: 510 KGLCG----IGSMDAALKLYH---------------------------EMLCQE--EPKS 536
Query: 431 EPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANS------- 483
+PD+++YNI++ C ++ A +LN M D PDV+T NTF+ T + S
Sbjct: 537 QPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGR 596
Query: 484 --------------MFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
A +V+ M+ + P +T+ IV CK
Sbjct: 597 SFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICK 643
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 193/432 (44%), Gaps = 6/432 (1%)
Query: 10 LAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAM 69
++P+ +FN +I + A+E+F + PD TY L+D K R EA+
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 70 EVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGF 129
+L +M+S G PS V Y LI + G L +L + M K P+ TY TL+ G
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 130 VNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDI 189
K + A+ + E M ++ C PN T+ LI + + ++ ++ +
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362
Query: 190 VTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKR 249
++ L++ + G E ++++M G P ++ L+ R G ++A+ + R
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNR 422
Query: 250 MLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYAN-GK 308
M+ +G P+ TY++++ + GL E++ +V EM+ C N+ YS L+ G+
Sbjct: 423 MIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGR 482
Query: 309 EFEKMNALAEEIYSG---KITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDIT 365
E M ++ + G ++ ++K L + S D + H L ++ D+
Sbjct: 483 VKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGS-MDAALKLYHEMLCQEEPKSQPDVV 541
Query: 366 TLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLM-YLHSRTRNFRKSEMILRE 424
T N +L +K +++ +L M + G + N+ + L ++ + K L E
Sbjct: 542 TYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEE 601
Query: 425 ILEKGIEPDLIS 436
++ + ++ +S
Sbjct: 602 LVVRLLKRQRVS 613
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 168/380 (44%), Gaps = 11/380 (2%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M + PD T+ TL+ +EA+ L +E++ G P V YN L+D K
Sbjct: 213 MPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGD 272
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+++ M +G P+ VTY +LI G L++A+ L +MV P+ TY T
Sbjct: 273 LTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGT 332
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
L++G V ++ A+R+ M G N ++ LI G E +++++
Sbjct: 333 LINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG 392
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
C P+IV ++ L+ + G +E + M +G +P T+++L+ + + G ++A
Sbjct: 393 CKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAV 452
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
V+K M + G + + Y+ ++ L G +++ V S+M KP+ V YSS++
Sbjct: 453 QVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGL 512
Query: 305 -------ANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKK 357
A K + +M E + T+ +LL L + ++ A
Sbjct: 513 CGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKD----ISRAVDLLNSMLD 568
Query: 358 RGIPHDITTLNAMLSLYGRK 377
RG D+ T N L+ K
Sbjct: 569 RGCDPDVITCNTFLNTLSEK 588
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/448 (21%), Positives = 198/448 (44%), Gaps = 50/448 (11%)
Query: 86 TYTSLISAYVRDGLLEEA------LELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAM 139
T +S+I +Y G + + L+N+++ + + + + + K +L
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIE--RSFIVVFRAYGKAHLPDKAVDLFH 136
Query: 140 RVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ----CSPDIVTWNTL 195
R+ +E R CK ++ +FN+++ + + G++ + + + SP+ +++N +
Sbjct: 137 RMVDEFR---CKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLV 193
Query: 196 LAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGV 255
+ + VF+ M +P+ T+ TL+ + D+A + M G
Sbjct: 194 IKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGC 253
Query: 256 TPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNA 315
+P YN ++ L + G + K++ M C PNEVTY++L+H + +K +
Sbjct: 254 SPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVS 313
Query: 316 LAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYG 375
L E + S K IP+D+T +++
Sbjct: 314 LLERMVSSKC----------------------------------IPNDVT-YGTLINGLV 338
Query: 376 RKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLI 435
+++ ++L M E G+ L+ Y+ L+ + ++ + R++ EKG +P+++
Sbjct: 339 KQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIV 398
Query: 436 SYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCM 495
Y++++ CR GK EAK ILN M +P+ TY++ + + + EA+ V + M
Sbjct: 399 VYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEM 458
Query: 496 IKQGCKPDQNTYNSIVDWYCKLHLREEA 523
K GC ++ Y+ ++D C + +EA
Sbjct: 459 DKTGCSRNKFCYSVLIDGLCGVGRVKEA 486
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 149/350 (42%), Gaps = 48/350 (13%)
Query: 201 QNGLDSEVS-GVFKEMKRAG-FVPERETFNTLISAYSRCGSFDQARAVYKRM-LEAGVTP 257
+N L++ +S +FK + G F T +++I +Y+ G FD + R+ LE V
Sbjct: 52 ENPLEAPISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVII 111
Query: 258 DLSTYNAVLAALARGGLWEQSEKVLSEM-ENGRCKPNEVTYSSLLHA------YANGKEF 310
+ S + V A + L +++ + M + RCK + +++S+L+ Y G EF
Sbjct: 112 ERS-FIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEF 170
Query: 311 EKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAM 370
+ + + I+ + + ++ K F+ A F RG+P
Sbjct: 171 --YDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVF-----RGMPE-------- 215
Query: 371 LSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGI 430
RK L G+T Y +LM + ++ ++L E+ +G
Sbjct: 216 -----RKCL------------PDGYT-----YCTLMDGLCKEERIDEAVLLLDEMQSEGC 253
Query: 431 EPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIG 490
P + YN++I C+ G +T ++++ M VP+ VTYNT + +A+
Sbjct: 254 SPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVS 313
Query: 491 VVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEE 540
+++ M+ C P+ TY ++++ K +A + ++ H+++
Sbjct: 314 LLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQH 363
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 169/339 (49%), Gaps = 34/339 (10%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY---G 60
+M ++GL ++ +NTL+ G + ++A+++F + G RP+ TY+ LL++ G
Sbjct: 295 EMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEG 354
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIV-----------------------------TYTSLI 91
+ R +E+ K+ ++G +V +Y S++
Sbjct: 355 QLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSML 414
Query: 92 SAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCK 151
+ G EA+E+ +++ EK + D Y T+ S K+ +FE+M+ G
Sbjct: 415 ESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPS 474
Query: 152 PNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGV 211
P+I T+N LI +G G E +F+E++ C PDI+++N+L+ G+NG E
Sbjct: 475 PDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVR 534
Query: 212 FKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALAR 271
FKEM+ G P+ T++TL+ + + + A ++++ ML G P++ TYN +L L +
Sbjct: 535 FKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEK 594
Query: 272 GGLWEQSEKVLSEMENGRCKPNEVTYSSL--LHAYANGK 308
G ++ + S+M+ P+ +TY+ L L + ++GK
Sbjct: 595 NGRTAEAVDLYSKMKQQGLTPDSITYTVLERLQSVSHGK 633
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 224/484 (46%), Gaps = 35/484 (7%)
Query: 65 PKEAMEVLKQMESR-------GFPPSIVTYTS--------LISAYVRDGL---LEEALEL 106
P EA E+LK + S PS+ Y+ +I R L + +
Sbjct: 99 PDEASEILKSLNSPLLAVEFFKLVPSLCPYSQNDPFLYNRIILILSRSNLPDRFDRVRSI 158
Query: 107 KNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGD 166
+ MV+ ++ ++ T L+ F N + ++ +R+ ++ K N T+ L++ Y
Sbjct: 159 LDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRL---VKKWDLKMNSFTYKCLLQAYLR 215
Query: 167 RGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERET 226
+++ V+ EI+ DI +N LL + D + VF++MK+ + T
Sbjct: 216 SRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAK---DEKACQVFEDMKKRHCRRDEYT 272
Query: 227 FNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEME 286
+ +I R G D+A ++ M+ G+T ++ YN ++ LA+G + +++ +V S M
Sbjct: 273 YTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMV 332
Query: 287 NGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAV---LLKTLVLVNSKFD 343
C+PNE TYS LL+ + +++ + E S + T + L++TL SK
Sbjct: 333 ETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVE--ISKRYMTQGIYSYLVRTL----SKLG 386
Query: 344 FLAEAEHAFLEFKKRGIPHDITTLNAML-SLYGRKKLVAKTNKILKFMYESGFTLSLPGY 402
++EA F + + + + +ML SL G K + ++L ++E G Y
Sbjct: 387 HVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAI-EMLSKIHEKGVVTDTMMY 445
Query: 403 NSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKD 462
N++ + + + ++ + G PD+ +YNI+I ++ R G++ EA I E++
Sbjct: 446 NTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELER 505
Query: 463 PAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREE 522
PD+++YN+ + N EA + M ++G PD TY+++++ + K E
Sbjct: 506 SDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEM 565
Query: 523 AYNF 526
AY+
Sbjct: 566 AYSL 569
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/513 (22%), Positives = 231/513 (45%), Gaps = 28/513 (5%)
Query: 10 LAPDLCTF--------NTLISCCRAGSL---YEEALELFEEIKLAGLRPDMVTYNALLDV 58
L P LC + N +I +L ++ + + + + + ++ T N L+
Sbjct: 121 LVPSLCPYSQNDPFLYNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGF 180
Query: 59 YGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPD 118
+G + + + ++K+ + + TY L+ AY+R +A ++ ++ K D
Sbjct: 181 FGNTEDLQMCLRLVKKWD---LKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLD 237
Query: 119 VYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFK 178
++ Y LL KDE A +VFE+M+ C+ + T+ +I+ G G E +F
Sbjct: 238 IFAYNMLLDALA---KDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFN 294
Query: 179 EIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLIS---AYS 235
E+ + ++V +NTL+ V + + + VF M G P T++ L++ A
Sbjct: 295 EMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEG 354
Query: 236 RCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEV 295
+ D + KR + G+ Y+ ++ L++ G ++ ++ +M + K
Sbjct: 355 QLVRLDGVVEISKRYMTQGI------YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERD 408
Query: 296 TYSSLLHAYAN-GKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLE 354
+Y S+L + GK E + L++ I+ + T ++ T+ K ++ F +
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSK-IHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEK 467
Query: 355 FKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRN 414
KK G DI T N +++ +GR V + I + + S + YNSL+ + +
Sbjct: 468 MKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGD 527
Query: 415 FRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNT 474
++ + +E+ EKG+ PD+++Y+ ++ + + ++ A + EM P++VTYN
Sbjct: 528 VDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNI 587
Query: 475 FVATYAANSMFGEAIGVVQCMIKQGCKPDQNTY 507
+ N EA+ + M +QG PD TY
Sbjct: 588 LLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITY 620
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 194/427 (45%), Gaps = 10/427 (2%)
Query: 16 TFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQM 75
T+ L+ Y +A +++ EI+ G + D+ YN LLD K + A +V + M
Sbjct: 205 TYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEK---ACQVFEDM 261
Query: 76 ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKD 135
+ R TYT +I R G +EA+ L N+M+ + + +V Y TL+ K
Sbjct: 262 KKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMV 321
Query: 136 ELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTL 195
+ A++VF M GC+PN T++ L+ + G + V EI + I ++ L
Sbjct: 322 DKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVV-EISKRYMTQGIYSY--L 378
Query: 196 LAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGV 255
+ + G SE +F +M ER+++ +++ + G +A + ++ E GV
Sbjct: 379 VRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGV 438
Query: 256 TPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNA 315
D YN V +AL + + +M+ P+ TY+ L+ ++ E ++
Sbjct: 439 VTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAIN 498
Query: 316 LAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYG 375
+ EE+ + +L+ K + EA F E +++G+ D+ T + ++ +G
Sbjct: 499 IFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFG 558
Query: 376 RKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMI--LREILEKGIEPD 433
+ + V + + M G ++ YN L L +N R +E + ++ ++G+ PD
Sbjct: 559 KTERVEMAYSLFEEMLVKGCQPNIVTYNIL--LDCLEKNGRTAEAVDLYSKMKQQGLTPD 616
Query: 434 LISYNIV 440
I+Y ++
Sbjct: 617 SITYTVL 623
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 197/422 (46%), Gaps = 46/422 (10%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+++ G D+ +N L+ A + E+A ++FE++K R D TY ++ G+
Sbjct: 228 EIRRGGHKLDIFAYNMLLD---ALAKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIG 284
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ EA+ + +M + G ++V Y +L+ + ++++A+++ ++MVE +P+ YTY+
Sbjct: 285 KCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYS 344
Query: 124 TLLS------------GFVNAKKDEL--------------------AMRVFEEMRTAGCK 151
LL+ G V K + A R+F +M + K
Sbjct: 345 LLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVK 404
Query: 152 PNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGV 211
++ ++++ G E ++ +I D + +NT+ + G+ S + +
Sbjct: 405 GERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDL 464
Query: 212 FKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALAR 271
F++MK+ G P+ T+N LI+++ R G D+A +++ + + PD+ +YN+++ L +
Sbjct: 465 FEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGK 524
Query: 272 GGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIY----SGKITT 327
G +++ EM+ P+ VTYS+L+ + + E +L EE+ I T
Sbjct: 525 NGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVT 584
Query: 328 HAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD---ITTLNAMLSLYGRKKLVAKTN 384
+ +LL L K AEA + + K++G+ D T L + S+ K + + N
Sbjct: 585 YNILLDCL----EKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERLQSVSHGKSRIRRKN 640
Query: 385 KI 386
I
Sbjct: 641 PI 642
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 106/195 (54%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
ML + +G+ D +NT+ S +LFE++K G PD+ TYN L+ +G
Sbjct: 429 MLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFG 488
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ EA+ + +++E P I++Y SLI+ ++G ++EA +M EK + PDV
Sbjct: 489 RVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVV 548
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY+TL+ F ++ E+A +FEEM GC+PNI T+N L+ G AE ++ ++
Sbjct: 549 TYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKM 608
Query: 181 KACQCSPDIVTWNTL 195
K +PD +T+ L
Sbjct: 609 KQQGLTPDSITYTVL 623
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 154/347 (44%), Gaps = 9/347 (2%)
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVY 247
+I T N L+ FG ++ + +K+ T+ L+ AY R + +A VY
Sbjct: 170 NISTVNILIGFFGNT---EDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVY 226
Query: 248 KRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG 307
+ G D+ YN +L ALA+ E++ +V +M+ C+ +E TY+ ++
Sbjct: 227 CEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRI 283
Query: 308 KEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTL 367
+ ++ L E+ + +T + V TL+ V +K + +A F + G + T
Sbjct: 284 GKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTY 343
Query: 368 NAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILE 427
+ +L+L + + + + +++ S ++ Y+ L+ S+ + ++ + ++
Sbjct: 344 SLLLNLLVAEGQLVRLDGVVEI---SKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWS 400
Query: 428 KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGE 487
++ + SY ++ + C GK EA +L+++ + V D + YNT +
Sbjct: 401 FPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISH 460
Query: 488 AIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLD 534
+ + M K G PD TYN ++ + ++ +EA N L D
Sbjct: 461 IHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSD 507
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 169/367 (46%), Gaps = 3/367 (0%)
Query: 30 YEEALELFEEI-KLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYT 88
++ AL++F + K P TY L V G ++P +A + + M S G P+I YT
Sbjct: 124 WQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYT 183
Query: 89 SLISAYVRDGLLEEALELKNQMVE-KHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRT 147
SLIS Y + LL++A M KPDV+T+T L+S + +L + EM
Sbjct: 184 SLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSY 243
Query: 148 AGCKPNICTFNALIKMYGDRGMFAEMGKVFKE-IKACQCSPDIVTWNTLLAVFGQNGLDS 206
G + T+N +I YG GMF EM V + I+ PD+ T N+++ +G
Sbjct: 244 LGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMR 303
Query: 207 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVL 266
++ + + G P+ TFN LI ++ + G + + +V M + + TYN V+
Sbjct: 304 KMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVI 363
Query: 267 AALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKIT 326
+ G E+ + V +M+ KPN +TY SL++AY+ K++++ +I + +
Sbjct: 364 ETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVV 423
Query: 327 THAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKI 386
++ + LA + +++ ++R D T M+ Y + ++
Sbjct: 424 LDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQEL 483
Query: 387 LKFMYES 393
K M S
Sbjct: 484 EKQMISS 490
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 163/323 (50%), Gaps = 2/323 (0%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIK-LAGLRPDMVTYNALLDVYGKSR 63
M S+GL P + + +LIS L ++A E +K ++ +PD+ T+ L+ K
Sbjct: 170 MLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLG 229
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIK-PDVYTY 122
R ++ +M G S VTY ++I Y + G+ EE + M+E PDV T
Sbjct: 230 RFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTL 289
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
+++ + N + + + G +P+I TFN LI +G GM+ +M V ++
Sbjct: 290 NSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEK 349
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
S VT+N ++ FG+ G ++ VF++MK G P T+ +L++AYS+ G +
Sbjct: 350 RFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVK 409
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
+V ++++ + V D +N ++ A + G +++ +ME +CKP+++T+++++
Sbjct: 410 IDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIK 469
Query: 303 AYANGKEFEKMNALAEEIYSGKI 325
Y F+ + L +++ S I
Sbjct: 470 TYTAHGIFDAVQELEKQMISSDI 492
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 180/423 (42%), Gaps = 73/423 (17%)
Query: 95 VRDGLLEEALELKNQMVEKH-IKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPN 153
+++ + AL++ N + ++H +P TYT L N K+ + A +FE M + G KP
Sbjct: 119 IKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPT 178
Query: 154 ICTFNALIKMYGDRGMFAEMGKVFKEIKAC-QCSPDIVTWNTLLAVFGQNGLDSEVSGVF 212
I + +LI +YG + + + +K+ C PD+
Sbjct: 179 IDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVF---------------------- 216
Query: 213 KEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARG 272
TF LIS + G FD +++ M GV TYN ++ +
Sbjct: 217 -------------TFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKA 263
Query: 273 GLWEQSEKVLSEM-ENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVL 331
G++E+ E VL++M E+G P+ T +S++ +Y NG+ KM
Sbjct: 264 GMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKM------------------ 305
Query: 332 LKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMY 391
E + F+ G+ DITT N ++ +G+ + K ++ FM
Sbjct: 306 -----------------ESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFME 348
Query: 392 ESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMT 451
+ F+L+ YN ++ + K + + R++ +G++P+ I+Y ++ AY + G +
Sbjct: 349 KRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVV 408
Query: 452 EAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
+ +L ++ + V D +N + Y + M ++ CKPD+ T+ +++
Sbjct: 409 KIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMI 468
Query: 512 DWY 514
Y
Sbjct: 469 KTY 471
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 123/256 (48%), Gaps = 1/256 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEE-IKLAGLRPDMVTYNALLDVY 59
++++M G+ T+NT+I ++EE + + I+ PD+ T N+++ Y
Sbjct: 237 IVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSY 296
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
G R ++ + + G P I T+ LI ++ + G+ ++ + + M ++
Sbjct: 297 GNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTT 356
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TY ++ F A + E VF +M+ G KPN T+ +L+ Y G+ ++ V ++
Sbjct: 357 VTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQ 416
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
I D +N ++ +GQ G + + ++ +M+ P++ TF T+I Y+ G
Sbjct: 417 IVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGI 476
Query: 240 FDQARAVYKRMLEAGV 255
FD + + K+M+ + +
Sbjct: 477 FDAVQELEKQMISSDI 492
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 133/306 (43%), Gaps = 37/306 (12%)
Query: 216 KRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLW 275
K+ + P +T+ L C DQA +++ ML G+ P + Y ++++ + L
Sbjct: 136 KQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELL 195
Query: 276 EQSEKVLSEMEN-GRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKT 334
+++ L M++ CKP+ T++ L+ F+ L+K+
Sbjct: 196 DKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFD-------------------LVKS 236
Query: 335 LVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESG 394
+VL E ++L G+ T N ++ YG+ + + +L M E G
Sbjct: 237 IVL-----------EMSYL-----GVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDG 280
Query: 395 FTL-SLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEA 453
+L + NS++ + RN RK E G++PD+ ++NI+I ++ + G +
Sbjct: 281 DSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKM 340
Query: 454 KRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDW 513
+++ M+ VTYN + T+ + V + M QG KP+ TY S+V+
Sbjct: 341 CSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNA 400
Query: 514 YCKLHL 519
Y K L
Sbjct: 401 YSKAGL 406
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 169/364 (46%)
Query: 31 EEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSL 90
++A+ + + ++G PD +TYN ++ K + A+ +L+ M G PP ++TY ++
Sbjct: 156 DKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTV 215
Query: 91 ISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
I G E+A+ ++ P + TYT L+ A+ V E+M GC
Sbjct: 216 IRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGC 275
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
P+I T+N+L+ RG E+ V + I + + VT+NTLL + EV
Sbjct: 276 YPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEE 335
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
+ M + + P T+N LI+ + +A + +MLE PD+ TYN VL A++
Sbjct: 336 ILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMS 395
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAV 330
+ G+ + + ++L ++N C P +TY+S++ A +K L ++ I +
Sbjct: 396 KEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDI 455
Query: 331 LLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFM 390
++L+ + + + EA E RG +T ++ +KK + ++++ M
Sbjct: 456 TRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIM 515
Query: 391 YESG 394
G
Sbjct: 516 LTGG 519
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/476 (21%), Positives = 209/476 (43%), Gaps = 35/476 (7%)
Query: 48 DMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELK 107
D T N +L + + +A ++++ M P + ++L+ R L++A+ +
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 108 NQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDR 167
MV PD TY ++ A+ + E+M +G P++ T+N +I+ D
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 168 GMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETF 227
G + + +K+ C P ++T+ L+ + + + V ++M G P+ T+
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 228 NTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMEN 287
N+L++ R G+ ++ +V + +L G+ + TYN +L +L W++ E++L+ M
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342
Query: 288 GRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAE 347
P +TY+ L++ + L++ DF +
Sbjct: 343 TSYCPTVITYNILINGLCKAR----------------------------LLSRAIDFFYQ 374
Query: 348 AEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMY 407
+++ +P DI T N +L ++ +V ++L + + L YNS++
Sbjct: 375 M------LEQKCLP-DIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVID 427
Query: 408 LHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVP 467
++ +K+ + ++L+ GI PD I+ +IY +CR + EA ++L E +
Sbjct: 428 GLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGI 487
Query: 468 DVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEA 523
TY + AI VV+ M+ GCKPD+ Y +IV ++ + EA
Sbjct: 488 RGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEA 543
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 151/323 (46%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L DM G PD+ T+NT+I C E+A+ +++ G P M+TY L+++
Sbjct: 196 LLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVC 255
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ A+EVL+ M G P IVTY SL++ R G LEE + ++ ++ +
Sbjct: 256 RYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTV 315
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY TLL + + + + M P + T+N LI + + F ++
Sbjct: 316 TYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQM 375
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+C PDIVT+NT+L + G+ + + +K P T+N++I ++ G
Sbjct: 376 LEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLM 435
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
+A +Y +ML+AG+ PD T +++ R L E++ +VL E N TY +
Sbjct: 436 KKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLV 495
Query: 301 LHAYANGKEFEKMNALAEEIYSG 323
+ KE E + E + +G
Sbjct: 496 IQGLCKKKEIEMAIEVVEIMLTG 518
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 132/279 (47%), Gaps = 2/279 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L DM +G PD+ T+N+L++ CR G+L EE + + I GL + VTYN LL
Sbjct: 266 VLEDMAVEGCYPDIVTYNSLVNYNCRRGNL-EEVASVIQHILSHGLELNTVTYNTLLHSL 324
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
E E+L M + P+++TY LI+ + LL A++ QM+E+ PD+
Sbjct: 325 CSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDI 384
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TY T+L + A+ + ++ C P + T+N++I +G+ + +++ +
Sbjct: 385 VTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQ 444
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+ PD +T +L+ F + L E V KE G T+ +I +
Sbjct: 445 MLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKE 504
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQS 278
+ A V + ML G PD + Y A++ + G+ ++
Sbjct: 505 IEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEA 543
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 37/206 (17%)
Query: 385 KILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAY 444
K+++ M P ++L+ +R K+ ILR ++ G PD I+YN++I
Sbjct: 125 KLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNL 184
Query: 445 CRNGKMTEAKRILNEMKDPAPVPDVVTYNT----------------------------FV 476
C+ G + A +L +M PDV+TYNT F+
Sbjct: 185 CKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFM 244
Query: 477 ATYAANSMF-------GEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHN 529
TY AI V++ M +GC PD TYNS+V++ C+ EE + + +
Sbjct: 245 ITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQH 304
Query: 530 LSSLDLHVSEEEKGRLLERIA--EKW 553
+ S L ++ LL + E W
Sbjct: 305 ILSHGLELNTVTYNTLLHSLCSHEYW 330
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 123/516 (23%), Positives = 218/516 (42%), Gaps = 41/516 (7%)
Query: 3 MDMKSQGLAPDLCTFNTLISCCRAGSLY--EEALELFEEIKLAGLRPDMVTYNALLDVYG 60
M K P+ T + ++ G L E+ + L G+ P+ V +
Sbjct: 211 MLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLC 270
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K+ R A ++L + P + +L+S R+ + +L +M E I+PDV
Sbjct: 271 KNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVV 330
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
T L++ +++ + A+ VFE+MR G + G V K
Sbjct: 331 TLGILINTLCKSRRVDEALEVFEKMR---------------------GKRTDDGNVIK-- 367
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMK-RAGFVPERETFNTLISAYSRCGS 239
D + +NTL+ + G E + MK P T+N LI Y R G
Sbjct: 368 ------ADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGK 421
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
+ A+ V RM E + P++ T N ++ + R + +ME K N VTY +
Sbjct: 422 LETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMT 481
Query: 300 LLHAYANGKEFEKMNALAEEIYSGKITTHA----VLLKTLVLVNSKFDFLAEAEHAFLEF 355
L+HA + EK E++ + A L+ L V D + E +
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE----KL 537
Query: 356 KKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNF 415
K+ G D+ N ++ L+ K K ++L M + G YN+L+ + ++F
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF 597
Query: 416 RKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPV-PDVVTYNT 474
E ++ ++ E G++P + +Y VI AYC G++ EA ++ +M + V P+ V YN
Sbjct: 598 ESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI 657
Query: 475 FVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSI 510
+ ++ FG+A+ + + M + +P+ TYN++
Sbjct: 658 LINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 172/339 (50%), Gaps = 4/339 (1%)
Query: 1 MLMDMK-SQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDV 58
+L+ MK + AP+ T+N LI CRAG L E A E+ +K ++P++VT N ++
Sbjct: 392 LLVRMKLEERCAPNAVTYNCLIDGYCRAGKL-ETAKEVVSRMKEDEIKPNVVTVNTIVGG 450
Query: 59 YGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPD 118
+ A+ ME G ++VTY +LI A +E+A+ +M+E PD
Sbjct: 451 MCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPD 510
Query: 119 VYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFK 178
Y L+SG ++D A+RV E+++ G ++ +N LI ++ D+ ++ ++
Sbjct: 511 AKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLT 570
Query: 179 EIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 238
+++ PD +T+NTL++ FG++ V + ++M+ G P T+ +I AY G
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVG 630
Query: 239 SFDQARAVYKRM-LEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTY 297
D+A ++K M L + V P+ YN ++ A ++ G + Q+ + EM+ +PN TY
Sbjct: 631 ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
Query: 298 SSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLV 336
++L + E + L +E+ + + ++ L+
Sbjct: 691 NALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILM 729
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 116/512 (22%), Positives = 224/512 (43%), Gaps = 51/512 (9%)
Query: 7 SQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPK 66
S G++P+ IS + A ++ ++ + +NALL G++
Sbjct: 252 SHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDIS 311
Query: 67 EAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKH------IKPDVY 120
+++ +M+ P +VT LI+ + ++EALE+ +M K IK D
Sbjct: 312 RMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSI 371
Query: 121 TYTTLLSGFVNAKK----DELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKV 176
+ TL+ G + +EL +R+ E R C PN T+N LI Y G +V
Sbjct: 372 HFNTLIDGLCKVGRLKEAEELLVRMKLEER---CAPNAVTYNCLIDGYCRAGKLETAKEV 428
Query: 177 FKEIKACQCSPDIVTWNTLL-AVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYS 235
+K + P++VT NT++ + +GL+ V F +M++ G T+ TLI A
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV-FFMDMEKEGVKGNVVTYMTLIHACC 487
Query: 236 RCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEV 295
+ ++A Y++MLEAG +PD Y A+++ L + + +V+ +++ G + +
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLL 547
Query: 296 TYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEF 355
Y+ L+ + + EK+ ++ L + E
Sbjct: 548 AYNMLIGLFCDKNNTEKV----------------------------YEMLTDME------ 573
Query: 356 KKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNF 415
K G D T N ++S +G+ K ++++ M E G ++ Y +++ +
Sbjct: 574 -KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGEL 632
Query: 416 RKSEMILREI-LEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNT 474
++ + +++ L + P+ + YNI+I A+ + G +A + EMK P+V TYN
Sbjct: 633 DEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNA 692
Query: 475 FVATYAANSMFGEAIGVVQCMIKQGCKPDQNT 506
+ + ++ M++Q C+P+Q T
Sbjct: 693 LFKCLNEKTQGETLLKLMDEMVEQSCEPNQIT 724
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/511 (19%), Positives = 223/511 (43%), Gaps = 13/511 (2%)
Query: 31 EEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSL 90
++ L L+E K + +V N L+ +G+ +++ V ++++S + +
Sbjct: 134 DKLLRLYEIAKEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERLDSNMKNSQV--RNVV 191
Query: 91 ISAYVRDGLLEEALELKNQMVEKH--IKPDVYTYTTLLSGFVNAK--KDELAMRVFEEMR 146
+ +R+GL+++A ++ ++M++K P+ T +L + +E + +
Sbjct: 192 VDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFS 251
Query: 147 TAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDS 206
+ G PN I + ++ + + +N LL+ G+N S
Sbjct: 252 SHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDIS 311
Query: 207 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRM----LEAG--VTPDLS 260
++ + +M P+ T LI+ + D+A V+++M + G + D
Sbjct: 312 RMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSI 371
Query: 261 TYNAVLAALARGGLWEQSEKVLSEME-NGRCKPNEVTYSSLLHAYANGKEFEKMNALAEE 319
+N ++ L + G +++E++L M+ RC PN VTY+ L+ Y + E +
Sbjct: 372 HFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSR 431
Query: 320 IYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKL 379
+ +I + V + T+V + L A F++ +K G+ ++ T ++
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 380 VAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNI 439
V K + M E+G + Y +L+ + R + ++ ++ E G DL++YN+
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 440 VIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQG 499
+I +C + +L +M+ PD +TYNT ++ + + F +++ M + G
Sbjct: 552 LIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 500 CKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
P TY +++D YC + +EA ++
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 132/270 (48%), Gaps = 1/270 (0%)
Query: 2 LMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGK 61
MDM+ +G+ ++ T+ TLI C + S E+A+ +E++ AG PD Y AL+ +
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYT 121
RR +A+ V+++++ GF ++ Y LI + E+ E+ M ++ KPD T
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSIT 583
Query: 122 YTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK 181
Y TL+S F K E R+ E+MR G P + T+ A+I Y G E K+FK++
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 182 -ACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ +P+ V +N L+ F + G + + +EMK P ET+N L +
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQG 703
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
+ + M+E P+ T ++ L+
Sbjct: 704 ETLLKLMDEMVEQSCEPNQITMEILMERLS 733
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
ML DM+ +G PD T+NTLIS +E + E+++ GL P + TY A++D Y
Sbjct: 568 MLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC 627
Query: 61 KSRRPKEAMEVLKQMESRG-FPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
EA+++ K M P+ V Y LI+A+ + G +AL LK +M K ++P+V
Sbjct: 628 SVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNV 687
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIK 162
TY L + E +++ +EM C+PN T L++
Sbjct: 688 ETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILME 730
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/417 (20%), Positives = 176/417 (42%), Gaps = 18/417 (4%)
Query: 134 KDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWN 193
+D+L +R++E + + N LI+ +G GM + V++ + + + + N
Sbjct: 133 RDKL-LRLYEIAKEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERLDSNMKNSQV--RN 189
Query: 194 TLLAVFGQNGLDSEVSGVFKEM--KRAGFVPERETFNTLISAY--SRCGSFDQARAVYKR 249
++ V +NGL + V EM K + F P R T + ++ R + ++ A+ R
Sbjct: 190 VVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISR 249
Query: 250 MLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKE 309
GV+P+ +++L + + +LS++ + +++LL +
Sbjct: 250 FSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMD 309
Query: 310 FEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRG------IPHD 363
+MN L ++ KI V L L+ K + EA F + + + I D
Sbjct: 310 ISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKAD 369
Query: 364 ITTLNAMLS-LYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMIL 422
N ++ L +L +++ E + YN L+ + R ++ ++
Sbjct: 370 SIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVV 429
Query: 423 REILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAAN 482
+ E I+P++++ N ++ CR+ + A +M+ +VVTY T + +
Sbjct: 430 SRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSV 489
Query: 483 SMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLS----SLDL 535
S +A+ + M++ GC PD Y +++ C++ +A V L SLDL
Sbjct: 490 SNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDL 546
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 115/527 (21%), Positives = 243/527 (46%), Gaps = 5/527 (0%)
Query: 1 MLMDMKSQGL-APDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L +MK + L P T+ ++I ++A+ L +E+ G+ ++V +L+ +
Sbjct: 290 LLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGH 349
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
K+ A+ + +ME G P+ VT++ LI + ++G +E+ALE +M + P V
Sbjct: 350 CKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSV 409
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
+ T++ G++ +K E A+++F+E G N+ N ++ +G E ++ +
Sbjct: 410 FHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSK 468
Query: 180 IKACQCSPDIVTWN-TLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 238
+++ P++V++N +L Q +D VF + G P T++ LI R
Sbjct: 469 MESRGIGPNVVSYNNVMLGHCRQKNMDL-ARIVFSNILEKGLKPNNYTYSILIDGCFRNH 527
Query: 239 SFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM-ENGRCKPNEVTY 297
A V M + + + Y ++ L + G ++ ++L+ M E R + ++Y
Sbjct: 528 DEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSY 587
Query: 298 SSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKK 357
+S++ + E + A EE+ I+ + + +L+ K + + +A E K
Sbjct: 588 NSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKN 647
Query: 358 RGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRK 417
+G+ DI A++ + ++ + + + + E G S P YNSL+ N
Sbjct: 648 KGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVA 707
Query: 418 SEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVA 477
+ + +++L+ G+ DL +Y +I ++G + A + EM+ VPD + Y V
Sbjct: 708 ALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVN 767
Query: 478 TYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAY 524
+ F + + + + M K P+ YN+++ + + +EA+
Sbjct: 768 GLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAF 814
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/486 (23%), Positives = 218/486 (44%), Gaps = 16/486 (3%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M+ +G +P+ TF+ LI R E+ALE ++++++ GL P + + ++ + K ++
Sbjct: 365 MEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQK 424
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+EA+++ + G V T ++S + G +EA EL ++M + I P+V +Y
Sbjct: 425 HEEALKLFDESFETGLANVFVCNT-ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNN 483
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGK-----VFKE 179
++ G K +LA VF + G KPN T++ LI G F + V
Sbjct: 484 VMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILID-----GCFRNHDEQNALEVVNH 538
Query: 180 IKACQCSPDIVTWNTL---LAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 236
+ + + V + T+ L GQ E+ E KR ++N++I + +
Sbjct: 539 MTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKR--LCVSCMSYNSIIDGFFK 596
Query: 237 CGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVT 296
G D A A Y+ M G++P++ TY +++ L + +Q+ ++ EM+N K +
Sbjct: 597 EGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPA 656
Query: 297 YSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFK 356
Y +L+ + E +AL E+ + + +L+ + A + +
Sbjct: 657 YGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKML 716
Query: 357 KRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFR 416
K G+ D+ T ++ + + +++ M G Y ++ S+ F
Sbjct: 717 KDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFV 776
Query: 417 KSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFV 476
K + E+ + + P+++ YN VI + R G + EA R+ +EM D +PD T++ V
Sbjct: 777 KVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Query: 477 ATYAAN 482
+ N
Sbjct: 837 SGQVGN 842
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 184/374 (49%), Gaps = 3/374 (0%)
Query: 1 MLMDMKSQGLAPDLCTFN-TLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L M+S+G+ P++ ++N ++ CR ++ + A +F I GL+P+ TY+ L+D
Sbjct: 465 LLSKMESRGIGPNVVSYNNVMLGHCRQKNM-DLARIVFSNILEKGLKPNNYTYSILIDGC 523
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVE-KHIKPD 118
++ + A+EV+ M S + V Y ++I+ + G +A EL M+E K +
Sbjct: 524 FRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVS 583
Query: 119 VYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFK 178
+Y +++ GF + + A+ +EEM G PN+ T+ +L+ + ++
Sbjct: 584 CMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRD 643
Query: 179 EIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 238
E+K DI + L+ F + S +F E+ G P + +N+LIS + G
Sbjct: 644 EMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLG 703
Query: 239 SFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYS 298
+ A +YK+ML+ G+ DL TY ++ L + G + ++ +EM+ P+E+ Y+
Sbjct: 704 NMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYT 763
Query: 299 SLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKR 358
+++ + +F K+ + EE+ +T + ++ ++ + + L EA E +
Sbjct: 764 VIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDK 823
Query: 359 GIPHDITTLNAMLS 372
GI D T + ++S
Sbjct: 824 GILPDGATFDILVS 837
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 123/528 (23%), Positives = 233/528 (44%), Gaps = 44/528 (8%)
Query: 3 MDMKSQGLAPDLCTF-----NTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLD 57
+D+ +Q L D+ F TL + + SL EA EL+ + G+ D VT L+
Sbjct: 183 VDIVNQMLELDVIPFFPYVNRTLSALVQRNSL-TEAKELYSRMVAIGVDGDNVTTQLLMR 241
Query: 58 VYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHI-K 116
+ +P EA+EVL + RG P + Y+ + A + L A L +M EK +
Sbjct: 242 ASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCV 301
Query: 117 PDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKV 176
P TYT+++ V + A+R+ +EM + G N+ +LI + +
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL 361
Query: 177 FKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 236
F +++ SP+ VT++ L+ F +NG + +K+M+ G P +T+I + +
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLK 421
Query: 237 CGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVT 296
++A ++ E G+ ++ N +L+ L + G +++ ++LS+ME+ PN V+
Sbjct: 422 GQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVS 480
Query: 297 YSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFK 356
Y++++ + K + LA ++S +L K L N + L +
Sbjct: 481 YNNVMLGHCRQKNMD----LARIVFSN------ILEKGLKPNNYTYSILID--------- 521
Query: 357 KRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMY-LHSRTRNF 415
G + NA+ +++ M S ++ Y +++ L +
Sbjct: 522 --GCFRNHDEQNAL--------------EVVNHMTSSNIEVNGVVYQTIINGLCKVGQTS 565
Query: 416 RKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTF 475
+ E++ I EK + +SYN +I + + G+M A EM P+V+TY +
Sbjct: 566 KARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSL 625
Query: 476 VATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEA 523
+ N+ +A+ + M +G K D Y +++D +CK E A
Sbjct: 626 MNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESA 673
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 129/242 (53%), Gaps = 2/242 (0%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M G++P++ T+ +L++ + ++ALE+ +E+K G++ D+ Y AL+D + K
Sbjct: 609 EMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRS 668
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ A + ++ G PS Y SLIS + G + AL+L +M++ ++ D+ TYT
Sbjct: 669 NMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYT 728
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
TL+ G + LA ++ EM+ G P+ + ++ +G F ++ K+F+E+K
Sbjct: 729 TLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKN 788
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
+P+++ +N ++A + G E + EM G +P+ TF+ L+S + G+
Sbjct: 789 NVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG--QVGNLQPV 846
Query: 244 RA 245
RA
Sbjct: 847 RA 848
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/535 (20%), Positives = 215/535 (40%), Gaps = 80/535 (14%)
Query: 35 ELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAY 94
+L + K G + +N LL+ Y K R+ A++++ QM P +SA
Sbjct: 149 KLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSAL 208
Query: 95 VRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNI 154
V+ L EA EL ++MV + D T L+ + +K A+ V G +P+
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDS 268
Query: 155 CTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKE 214
++ ++AC + D+ N+LL +E
Sbjct: 269 LLYSL-------------------AVQACCKTLDLAMANSLL----------------RE 293
Query: 215 MKRAGF-VPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGG 273
MK VP +ET+ ++I A + G+ D A + ML G++ ++ +++ +
Sbjct: 294 MKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNN 353
Query: 274 LWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLK 333
+ + +ME PN VT+S L+ + E EK +++ +T +
Sbjct: 354 DLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVH 413
Query: 334 TLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYES 393
T++ K EA F E + G+ ++ N +LS ++ + ++L M
Sbjct: 414 TIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESR 472
Query: 394 GFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNI-------------- 439
G ++ YN++M H R +N + ++ ILEKG++P+ +Y+I
Sbjct: 473 GIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNA 532
Query: 440 ---------------------VIYAYCRNGKMTEAKRIL-NEMKDPAPVPDVVTYNTFVA 477
+I C+ G+ ++A+ +L N +++ ++YN+ +
Sbjct: 533 LEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIID 592
Query: 478 TYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK-------LHLREEAYN 525
+ A+ + M G P+ TY S+++ CK L +R+E N
Sbjct: 593 GFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKN 647
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/403 (21%), Positives = 173/403 (42%), Gaps = 2/403 (0%)
Query: 137 LAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLL 196
L ++ + ++ G + N FN L+ Y + ++ P N L
Sbjct: 146 LVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTL 205
Query: 197 AVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVT 256
+ Q +E ++ M G + T L+ A R +A V R +E G
Sbjct: 206 SALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAE 265
Query: 257 PDLSTYNAVLAALARGGLWEQSEKVLSEM-ENGRCKPNEVTYSSLLHAYANGKEFEKMNA 315
PD Y+ + A + + +L EM E C P++ TY+S++ A +
Sbjct: 266 PDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIR 325
Query: 316 LAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYG 375
L +E+ S I+ + V +L+ + K + L A F + +K G + T + ++ +
Sbjct: 326 LKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFR 385
Query: 376 RKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLI 435
+ + K + K M G T S+ ++++ + + ++ + E E G+ ++
Sbjct: 386 KNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVF 444
Query: 436 SYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCM 495
N ++ C+ GK EA +L++M+ P+VV+YN + + A V +
Sbjct: 445 VCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNI 504
Query: 496 IKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVS 538
+++G KP+ TY+ ++D + H + A V++++S ++ V+
Sbjct: 505 LEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVN 547
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 166/316 (52%), Gaps = 5/316 (1%)
Query: 10 LAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAM 69
+ P+L F L+ + ++ ++A+E+ +E+ GL PD + LLD K+ KEA
Sbjct: 165 IEPEL--FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEAS 222
Query: 70 EVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGF 129
+V + M + FPP++ +TSL+ + R+G L EA E+ QM E ++PD+ +T LLSG+
Sbjct: 223 KVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGY 281
Query: 130 VNAKKDELAMRVFEEMRTAGCKPNICTFNALIK-MYGDRGMFAEMGKVFKEIKACQCSPD 188
+A K A + +MR G +PN+ + LI+ + E +VF E++ C D
Sbjct: 282 AHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEAD 341
Query: 189 IVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYK 248
IVT+ L++ F + G+ + V +M++ G +P + T+ ++ A+ + F++ + +
Sbjct: 342 IVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIE 401
Query: 249 RMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY-ANG 307
+M G PDL YN V+ + G +++ ++ +EME P T+ +++ + + G
Sbjct: 402 KMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQG 461
Query: 308 KEFEKMNALAEEIYSG 323
E N E + G
Sbjct: 462 FLIEACNHFKEMVSRG 477
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 186/399 (46%), Gaps = 20/399 (5%)
Query: 150 CKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVS 209
CK + + + + G+ EM K E+ P++ L+ F + +
Sbjct: 134 CKSMVMILSKMRQFGAVWGLIEEMRKTNPEL----IEPELFV--VLMRRFASANMVKKAV 187
Query: 210 GVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAAL 269
V EM + G P+ F L+ A + GS +A V++ M E P+L + ++L
Sbjct: 188 EVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGW 246
Query: 270 ARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKE----FEKMNALAEEIYSGKI 325
R G ++++VL +M+ +P+ V +++LL YA+ + ++ MN + + + +
Sbjct: 247 CREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNV 306
Query: 326 TTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNK 385
+ VL++ L + D EA F+E ++ G DI T A++S + + ++ K
Sbjct: 307 NCYTVLIQALCRTEKRMD---EAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYS 363
Query: 386 ILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYC 445
+L M + G S Y +M H + F + ++ ++ +G PDL+ YN+VI C
Sbjct: 364 VLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLAC 423
Query: 446 RNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQG--CKPD 503
+ G++ EA R+ NEM+ P V T+ + + + EA + M+ +G P
Sbjct: 424 KLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQ 483
Query: 504 QNTYNSIVDWYC---KLHLREEAYNFVHN-LSSLDLHVS 538
T S+++ KL + ++ ++ + N SS +L+VS
Sbjct: 484 YGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVS 522
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 169/352 (48%), Gaps = 50/352 (14%)
Query: 1 MLMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L +M GL PD F L+ + C+ GS+ +EA ++FE+++ P++ + +LL Y
Sbjct: 189 VLDEMPKYGLEPDEYVFGCLLDALCKNGSV-KEASKVFEDMR-EKFPPNLRYFTSLL--Y 244
Query: 60 GKSRRPK--EAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKP 117
G R K EA EVL QM+ G P IV +T+L+S Y G + +A +L N M ++ +P
Sbjct: 245 GWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEP 304
Query: 118 DVYTYTTLLSGFVNAKK--DELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGM------ 169
+V YT L+ +K DE AMRVF EM GC+ +I T+ ALI + GM
Sbjct: 305 NVNCYTVLIQALCRTEKRMDE-AMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYS 363
Query: 170 -----------------------------FAEMGKVFKEIKACQCSPDIVTWNTLLAVFG 200
F E ++ +++K C PD++ +N ++ +
Sbjct: 364 VLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLAC 423
Query: 201 QNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGV--TPD 258
+ G E ++ EM+ G P +TF +I+ ++ G +A +K M+ G+ P
Sbjct: 424 KLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQ 483
Query: 259 LSTYNAVLAALARGGLWEQSEKVLSEMEN--GRCKPNEVTYSSLLHA-YANG 307
T ++L L R E ++ V S + N C+ N ++ +HA YA G
Sbjct: 484 YGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKG 535
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 166/365 (45%), Gaps = 28/365 (7%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L+ MK GL PD+ F L+S +A +L +++ G P++ Y L+
Sbjct: 258 VLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALC 317
Query: 61 KS-RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
++ +R EAM V +ME G IVTYT+LIS + + G++++ + + M +K + P
Sbjct: 318 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQ 377
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TY ++ ++ E + + E+M+ GC P++ +N +I++ G E +++ E
Sbjct: 378 VTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNE 437
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGF--VPERETFNTLISAYSRC 237
++A SP + T+ ++ F G E FKEM G P+ T +L++ R
Sbjct: 438 MEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRD 497
Query: 238 GSFDQARAVYKRMLEAGVTPDL--STYNAVLAAL-ARGGLWEQSEKVLSEMENGRCKPNE 294
+ A+ V+ + + +L S + + AL A+G + E L ME P
Sbjct: 498 DKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMD-LMPQP 556
Query: 295 VTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLE 354
TY+ L+ +N L + +IT V + + E E +F
Sbjct: 557 NTYAKLMKG---------LNKLYNRTIAAEITEKVVKMAS------------EREMSFKM 595
Query: 355 FKKRG 359
+KK+G
Sbjct: 596 YKKKG 600
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 147/273 (53%), Gaps = 1/273 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
M ++M G+ D T++T+I+C + +LY +A+E FE + GL PD VTY+A+LDVY
Sbjct: 208 MALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYS 267
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
KS + +E + + ++ + G+ P + ++ L + G + + +M +KP+V
Sbjct: 268 KSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVV 327
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
Y TLL A K LA +F EM AG PN T AL+K+YG + ++++E+
Sbjct: 328 VYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEM 387
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRA-GFVPERETFNTLISAYSRCGS 239
KA + D + +NTLL + GL+ E +F +MK + P+ ++ +++ Y G
Sbjct: 388 KAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGK 447
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARG 272
++A +++ ML+AGV ++ ++ L +
Sbjct: 448 AEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKA 480
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 165/346 (47%), Gaps = 2/346 (0%)
Query: 30 YEEALELFEEIKLAGLRP-DMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYT 88
+++ F +K L P + + YN + R+ + E+ +M G +TY+
Sbjct: 166 WQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYS 225
Query: 89 SLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTA 148
++I+ R L +A+E +M + + PD TY+ +L + + K E + ++E
Sbjct: 226 TIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVAT 285
Query: 149 GCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEV 208
G KP+ F+ L KM+G+ G + + V +E+K+ P++V +NTLL G+ G
Sbjct: 286 GWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLA 345
Query: 209 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAA 268
+F EM AG P +T L+ Y + A +++ M D YN +L
Sbjct: 346 RSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNM 405
Query: 269 LARGGLWEQSEKVLSEM-ENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITT 327
A GL E++E++ ++M E+ +C+P+ +Y+++L+ Y +G + EK L EE+ +
Sbjct: 406 CADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQV 465
Query: 328 HAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSL 373
+ + LV K + + + F KRG+ D +LS+
Sbjct: 466 NVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSV 511
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 126/316 (39%), Gaps = 34/316 (10%)
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVY 247
D +T++T++ + L ++ F+ M + G +P+ T++ ++ YS+ G ++ ++Y
Sbjct: 220 DNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLY 279
Query: 248 KRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG 307
+R + G PD ++ + G ++ VL EM++ KPN V Y++LL A
Sbjct: 280 ERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRA 339
Query: 308 KEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTL 367
+ +L E+ +T + L LV + K + +A + E K + P D
Sbjct: 340 GKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILY 399
Query: 368 NAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILE 427
N +L++ L + ++ M ES + R
Sbjct: 400 NTLLNMCADIGLEEEAERLFNDMKES--------------VQCR---------------- 429
Query: 428 KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGE 487
PD SY ++ Y GK +A + EM +V+ V +
Sbjct: 430 ----PDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDD 485
Query: 488 AIGVVQCMIKQGCKPD 503
+ V IK+G KPD
Sbjct: 486 VVYVFDLSIKRGVKPD 501
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/257 (18%), Positives = 113/257 (43%), Gaps = 1/257 (0%)
Query: 275 WEQSEKVLSEMENGRCKPNE-VTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLK 333
W+++ + +++ P E + Y+ + + G++F+ + +A E+ + +
Sbjct: 166 WQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYS 225
Query: 334 TLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYES 393
T++ + + +A F K G+ D T +A+L +Y + V + + + +
Sbjct: 226 TIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVAT 285
Query: 394 GFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEA 453
G+ ++ L + ++ +L+E+ ++P+++ YN ++ A R GK A
Sbjct: 286 GWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLA 345
Query: 454 KRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDW 513
+ + NEM + P+ T V Y +A+ + + M + D YN++++
Sbjct: 346 RSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNM 405
Query: 514 YCKLHLREEAYNFVHNL 530
+ L EEA +++
Sbjct: 406 CADIGLEEEAERLFNDM 422
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/465 (24%), Positives = 213/465 (45%), Gaps = 61/465 (13%)
Query: 48 DMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELK 107
D++ +N++L Y ++ + +EA+E++K+ME G P +VT+ LI Y + G + A++L
Sbjct: 246 DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLM 305
Query: 108 NQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTF---------- 157
+M I DV+T+T ++SG ++ A+ +F +M AG PN T
Sbjct: 306 QKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCL 365
Query: 158 -------------------------NALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTW 192
N+L+ MY G + KVF +K + D+ TW
Sbjct: 366 KVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK----NKDVYTW 421
Query: 193 NTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLE 252
N+++ + Q G + +F M+ A P T+NT+IS Y + G +A +++RM +
Sbjct: 422 NSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEK 481
Query: 253 AG-VTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYAN--GKE 309
G V + +T+N ++A + G +++ ++ +M+ R PN VT SLL A AN G +
Sbjct: 482 DGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAK 541
Query: 310 FEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAE--AEHAFLEFKKR---GI-PHD 363
+ EI+ VL + L +++ + L + A+ +E+ + G+ D
Sbjct: 542 ------MVREIHG------CVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKD 589
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILR 423
I T N+++ Y + M G T + +S++ H N + + +
Sbjct: 590 IITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFY 649
Query: 424 EIL-EKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVP 467
I + I P L + ++Y Y R ++ EA + + EM + P
Sbjct: 650 SIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETP 694
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 188/410 (45%), Gaps = 17/410 (4%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
++ M++ G+ D+ T+ +IS + +AL++F ++ LAG+ P+ VT + +
Sbjct: 304 LMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACS 363
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ + EV GF ++ SL+ Y + G LE+A ++ + + K DVY
Sbjct: 364 CLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVY 419
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
T+ ++++G+ A A +F M+ A +PNI T+N +I Y G E +F+ +
Sbjct: 420 TWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRM 479
Query: 181 -KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
K + + TWN ++A + QNG E +F++M+ + F+P T +L+ A +
Sbjct: 480 EKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLG 539
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
R ++ +L + + NA+ A+ G E S + ME + +T++S
Sbjct: 540 AKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMET----KDIITWNS 595
Query: 300 LLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRG 359
L+ Y + AL ++ + IT + L +++L + + E + F
Sbjct: 596 LIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIAND- 654
Query: 360 IPHDITTL---NAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLM 406
H I L +AM+ LYGR + + L+F+ E P + S +
Sbjct: 655 -YHIIPALEHCSAMVYLYGRAN---RLEEALQFIQEMNIQSETPIWESFL 700
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/463 (23%), Positives = 209/463 (45%), Gaps = 24/463 (5%)
Query: 67 EAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLL 126
EA + L + +G TY L+ + + G + L + +PDV+ T LL
Sbjct: 64 EAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARF-GLFTEPDVFVETKLL 122
Query: 127 SGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCS 186
S + A +VF+ MR + N+ T++A+I Y + E+ K+F+ +
Sbjct: 123 SMYAKCGCIADARKVFDSMR----ERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVL 178
Query: 187 PDIVTWNTLLAVFGQNGLDSEVSGVFKEMK-RAGFVPERETFNTLISAYSRCGSFDQARA 245
PD + +L G D E V + + G N++++ Y++CG D A
Sbjct: 179 PDDFLFPKILQGCANCG-DVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATK 237
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA 305
++RM E D+ +N+VL A + G E++ +++ EME P VT++ L+ Y
Sbjct: 238 FFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYN 293
Query: 306 NGKEFEKMNALAEEIYSGKIT----THAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIP 361
+ + L +++ + IT T ++ L+ ++ L FL G+
Sbjct: 294 QLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLA----GVV 349
Query: 362 HDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMI 421
+ T+ + +S K++ + +++ + GF + NSL+ ++S+ + +
Sbjct: 350 PNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKV 409
Query: 422 LREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAA 481
+ K D+ ++N +I YC+ G +A + M+D P+++T+NT ++ Y
Sbjct: 410 FDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIK 465
Query: 482 NSMFGEAIGVVQCMIKQG-CKPDQNTYNSIVDWYCKLHLREEA 523
N GEA+ + Q M K G + + T+N I+ Y + ++EA
Sbjct: 466 NGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEA 508
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/504 (20%), Positives = 218/504 (43%), Gaps = 21/504 (4%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVL 72
+L T++ +I + + E +LF + G+ PD + +L + +
Sbjct: 145 NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIH 204
Query: 73 KQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNA 132
+ G + S+++ Y + G L+ A + +M E+ DV + ++L +
Sbjct: 205 SVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQN 260
Query: 133 KKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTW 192
K E A+ + +EM G P + T+N LI Y G + ++++ + D+ TW
Sbjct: 261 GKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTW 320
Query: 193 NTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLE 252
+++ NG+ + +F++M AG VP T + +SA S +Q V+ ++
Sbjct: 321 TAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVK 380
Query: 253 AGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEK 312
G D+ N+++ ++ G E + KV ++N + T++S++ Y K
Sbjct: 381 MGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKN----KDVYTWNSMITGYCQAGYCGK 436
Query: 313 MNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRG-IPHDITTLNAML 371
L + + + + T++ K EA F +K G + + T N ++
Sbjct: 437 AYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLII 496
Query: 372 SLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREI----LE 427
+ Y + K ++ L+ + F+ +P +++ L N ++M+ REI L
Sbjct: 497 AGYIQN---GKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMV-REIHGCVLR 552
Query: 428 KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGE 487
+ ++ N + Y ++G + ++ I M+ D++T+N+ + Y + +G
Sbjct: 553 RNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGME----TKDIITWNSLIGGYVLHGSYGP 608
Query: 488 AIGVVQCMIKQGCKPDQNTYNSIV 511
A+ + M QG P++ T +SI+
Sbjct: 609 ALALFNQMKTQGITPNRGTLSSII 632
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/479 (18%), Positives = 192/479 (40%), Gaps = 56/479 (11%)
Query: 57 DVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIK 116
+++ KSR K+ + K+ E P Y R+G L EA + + + ++ K
Sbjct: 27 ELHPKSR--KKNLSFTKKKEPNIIPDEQFDY------LCRNGSLLEAEKALDSLFQQGSK 78
Query: 117 PDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKV 176
TY LL +++ L R+ +P++ L+ MY G A+ KV
Sbjct: 79 VKRSTYLKLLESCIDSGSIHLG-RILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKV 137
Query: 177 FKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 236
F ++ ++ TW+ ++ + + EV+ +F+ M + G +P+ F ++ +
Sbjct: 138 FDSMR----ERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCAN 193
Query: 237 CGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVT 296
CG + + ++ +++ G++ L N++LA A+ G + + K M + + +
Sbjct: 194 CGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMR----ERDVIA 249
Query: 297 YSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFK 356
++S+L AY + E+ L +E+ I+ V L+ ++ A + +
Sbjct: 250 WNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKME 309
Query: 357 KRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFR 416
GI D+ T AM+S + + + + M+ +G + S + S +
Sbjct: 310 TFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVIN 369
Query: 417 KSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFV 476
+ + ++ G D++ N ++ Y + GK+ +A+++ + +K+
Sbjct: 370 QGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK------------- 416
Query: 477 ATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDL 535
D T+NS++ YC+ +AY + +L
Sbjct: 417 --------------------------DVYTWNSMITGYCQAGYCGKAYELFTRMQDANL 449
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 141/323 (43%), Gaps = 10/323 (3%)
Query: 217 RAGFVPERETF--NTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGL 274
R G E + F L+S Y++CG AR V+ M E +L T++A++ A +R
Sbjct: 106 RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRER----NLFTWSAMIGAYSRENR 161
Query: 275 WEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKT 334
W + K+ M P++ + +L AN + E + + +++ + +
Sbjct: 162 WREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNS 221
Query: 335 LVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESG 394
++ V +K L A F ++R D+ N++L Y + + +++K M + G
Sbjct: 222 ILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEG 277
Query: 395 FTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAK 454
+ L +N L+ +++ + +++++ GI D+ ++ +I NG +A
Sbjct: 278 ISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQAL 337
Query: 455 RILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWY 514
+ +M VP+ VT + V+ + + + V +K G D NS+VD Y
Sbjct: 338 DMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMY 397
Query: 515 CKLHLREEAYNFVHNLSSLDLHV 537
K E+A ++ + D++
Sbjct: 398 SKCGKLEDARKVFDSVKNKDVYT 420
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 158/303 (52%), Gaps = 2/303 (0%)
Query: 2 LMDMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
++ M G+ PD+ T ++L++ C + S+ ++A+ + +++ G++ D+V L+D
Sbjct: 1 MLKMMKLGIEPDIVTASSLVNGFCLSNSI-KDAVYVAGQMEKMGIKRDVVVDTILIDTLC 59
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K+R A+EVLK+M+ RG P++VTY+SLI+ + G L +A ++M K I P+V
Sbjct: 60 KNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVI 119
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
T++ L+ + K V++ M PN+ T+++LI E K+ +
Sbjct: 120 TFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLM 179
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ C+P++VT++TL F ++ + + +M + G + NTLI Y + G
Sbjct: 180 ISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKI 239
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
D A V+ M G+ P++ +YN VLA L G E++ M+ R + +TY+ +
Sbjct: 240 DLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIM 299
Query: 301 LHA 303
+H
Sbjct: 300 IHG 302
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 152/297 (51%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M+ G+ D+ LI L ALE+ + +K G+ P++VTY++L+ KS R
Sbjct: 39 MEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGR 98
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+A L +M+S+ P+++T+++LI AY + G L + + M++ I P+V+TY++
Sbjct: 99 LADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSS 158
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
L+ G + + A+++ + M + GC PN+ T++ L + + K+ ++
Sbjct: 159 LIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRG 218
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
+ + V+ NTL+ + Q G GVF M G +P ++N +++ G ++A
Sbjct: 219 VAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKAL 278
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL 301
+ ++ M + D+ TY ++ + + + +++ + +++ R +P+ Y+ ++
Sbjct: 279 SRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 335
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 142/280 (50%), Gaps = 2/280 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L MK +G++P++ T+++LI+ C++G L +A E+ + P+++T++AL+D Y
Sbjct: 70 VLKRMKDRGISPNVVTYSSLITGLCKSGRL-ADAERRLHEMDSKKINPNVITFSALIDAY 128
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
K + + V K M P++ TY+SLI ++EA+++ + M+ K P+V
Sbjct: 129 AKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNV 188
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TY+TL +GF + + + +++ ++M G N + N LIK Y G VF
Sbjct: 189 VTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGY 248
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+ + P+I ++N +LA NG + F+ M++ + T+ +I +
Sbjct: 249 MTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACM 308
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSE 279
+A ++ ++ V PD Y ++A L R G+ +++
Sbjct: 309 VKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEAD 348
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 161/345 (46%)
Query: 109 QMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRG 168
+M++ I+PD+ T ++L++GF + + A+ V +M G K ++ LI
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 169 MFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFN 228
+ +V K +K SP++VT+++L+ ++G ++ EM P TF+
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 229 TLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENG 288
LI AY++ G + +VYK M++ + P++ TY++++ L +++ K+L M +
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 289 RCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEA 348
C PN VTYS+L + + + L +++ + + V TL+ + + A
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 349 EHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYL 408
F G+ +I + N +L+ V K + M ++ L + Y +++
Sbjct: 243 LGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHG 302
Query: 409 HSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEA 453
+ +++ + ++ K +EPD +Y I+I R G TEA
Sbjct: 303 MCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA 347
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 150/337 (44%)
Query: 187 PDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAV 246
PDIVT ++L+ F + + V +M++ G + LI + A V
Sbjct: 11 PDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEV 70
Query: 247 YKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYAN 306
KRM + G++P++ TY++++ L + G +E+ L EM++ + PN +T+S+L+ AYA
Sbjct: 71 LKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAK 130
Query: 307 GKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITT 366
+ K++++ + + I + +L+ + + EA +G ++ T
Sbjct: 131 RGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVT 190
Query: 367 LNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREIL 426
+ + + + + V K+L M + G + N+L+ + + + + +
Sbjct: 191 YSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMT 250
Query: 427 EKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFG 486
G+ P++ SYNIV+ NG++ +A M+ D++TY + M
Sbjct: 251 SNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVK 310
Query: 487 EAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEA 523
EA + + + +PD Y ++ + +R EA
Sbjct: 311 EAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA 347
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 139/317 (43%)
Query: 214 EMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGG 273
+M + G P+ T ++L++ + S A V +M + G+ D+ ++ L +
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 274 LWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLK 333
L + +VL M++ PN VTYSSL+ E+ S KI + +
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 334 TLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYES 393
L+ +K L++ + + + I ++ T ++++ V + K+L M
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 394 GFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEA 453
G T ++ Y++L ++ +L ++ ++G+ + +S N +I Y + GK+ A
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 454 KRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDW 513
+ M +P++ +YN +A AN +A+ + M K D TY ++
Sbjct: 243 LGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHG 302
Query: 514 YCKLHLREEAYNFVHNL 530
CK + +EAY+ + L
Sbjct: 303 MCKACMVKEAYDLFYKL 319
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 352 FLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSR 411
L+ K GI DI T +++++ + + + M + G + L+ +
Sbjct: 1 MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60
Query: 412 TRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVT 471
R + +L+ + ++GI P++++Y+ +I C++G++ +A+R L+EM P+V+T
Sbjct: 61 NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 120
Query: 472 YNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLS 531
++ + YA + V + MI+ P+ TY+S++ C + +EA +
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEA------IK 174
Query: 532 SLDLHVSE 539
LDL +S+
Sbjct: 175 MLDLMISK 182
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 160/347 (46%), Gaps = 9/347 (2%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEI--KLAGLRPDMVTYNALLDVYGKSRRPKEAME 70
DL N+++ + ++ + ++LF+ I RP T+ LL R P ++
Sbjct: 84 DLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLS--HACRAPDSSIS 141
Query: 71 ----VLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLL 126
VL M + G P VT + + G ++EA +L ++ EKH PD YTY LL
Sbjct: 142 NVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLL 201
Query: 127 SGFVNAKKDELAMRVFEEMRTA-GCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQC 185
K + +EMR KP++ +F LI + E + ++
Sbjct: 202 KHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGF 261
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
PD +NT++ F SE GV+K+MK G P++ T+NTLI S+ G ++AR
Sbjct: 262 KPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARM 321
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA 305
K M++AG PD +TY +++ + R G + +L EME C PN+ TY++LLH
Sbjct: 322 YLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLC 381
Query: 306 NGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAF 352
+ +K L E + S + + TLV K +AEA F
Sbjct: 382 KARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVF 428
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 143/303 (47%), Gaps = 4/303 (1%)
Query: 5 MKSQ-GLAPDLCTFNTLIS-CCRA-GSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGK 61
+KSQ P TF L+S CRA S + + GL PD VT + + +
Sbjct: 112 LKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCE 171
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEK-HIKPDVY 120
+ R EA +++K++ + PP TY L+ + L E ++M + +KPD+
Sbjct: 172 TGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLV 231
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
++T L+ N+K AM + ++ AG KP+ +N ++K + +E V+K++
Sbjct: 232 SFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKM 291
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
K PD +T+NTL+ + G E K M AG+ P+ T+ +L++ R G
Sbjct: 292 KEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGES 351
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
A ++ + M G P+ TYN +L L + L ++ ++ M++ K Y++L
Sbjct: 352 LGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATL 411
Query: 301 LHA 303
+ +
Sbjct: 412 VRS 414
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 135/298 (45%), Gaps = 3/298 (1%)
Query: 5 MKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M + GL PD T + + S C G + +EA +L +E+ PD TYN LL K +
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRV-DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCK 208
Query: 64 RPKEAMEVLKQM-ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
E + +M + P +V++T LI L EA+ L +++ KPD + Y
Sbjct: 209 DLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLY 268
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
T++ GF K A+ V+++M+ G +P+ T+N LI G E K +
Sbjct: 269 NTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVD 328
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
PD T+ +L+ + G + +EM+ G P T+NTL+ + D+
Sbjct: 329 AGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDK 388
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
+Y+ M +GV + + Y ++ +L + G ++ +V + + + YS+L
Sbjct: 389 GMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 134/273 (49%), Gaps = 7/273 (2%)
Query: 1 MLMDMKSQGLAPDLCTFNTLIS-CCRAGSL---YEEALELFEEIKLAGLRPDMVTYNALL 56
++ ++ + PD T+N L+ C+ L YE E+ ++ + +PD+V++ L+
Sbjct: 181 LMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDV---KPDLVSFTILI 237
Query: 57 DVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIK 116
D S+ +EAM ++ ++ + GF P Y +++ + EA+ + +M E+ ++
Sbjct: 238 DNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVE 297
Query: 117 PDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKV 176
PD TY TL+ G A + E A + M AG +P+ T+ +L+ +G +
Sbjct: 298 PDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSL 357
Query: 177 FKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 236
+E++A C+P+ T+NTLL + L + +++ MK +G E + TL+ + +
Sbjct: 358 LEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVK 417
Query: 237 CGSFDQARAVYKRMLEAGVTPDLSTYNAVLAAL 269
G +A V+ +++ D S Y+ + L
Sbjct: 418 SGKVAEAYEVFDYAVDSKSLSDASAYSTLETTL 450
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 152/363 (41%), Gaps = 10/363 (2%)
Query: 170 FAEMGKVFKEIKACQCSP-DIVTWNTLLAVFGQNGLDSEVSGVFKEM--KRAGFVPERET 226
++ +F I A P D+ N++L +G + ++ +F+ + + F P R T
Sbjct: 65 LSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRST 124
Query: 227 FNTLISAYSRC--GSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSE 284
F L+S R S V M+ G+ PD T + + +L G ++++ ++ E
Sbjct: 125 FLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKE 184
Query: 285 MENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSG-KITTHAVLLKTLV--LVNSK 341
+ P+ TY+ LL K+ + +E+ + V L+ + NSK
Sbjct: 185 LTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSK 244
Query: 342 FDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPG 401
L EA + + G D N ++ + ++ + K M E G
Sbjct: 245 N--LREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQIT 302
Query: 402 YNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMK 461
YN+L++ S+ ++ M L+ +++ G EPD +Y ++ CR G+ A +L EM+
Sbjct: 303 YNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEME 362
Query: 462 DPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLRE 521
P+ TYNT + + + + + + M G K + N Y ++V K
Sbjct: 363 ARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVA 422
Query: 522 EAY 524
EAY
Sbjct: 423 EAY 425
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 10/222 (4%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
++ + + G PD +NT++ S EA+ +++++K G+ PD +TYN L+
Sbjct: 252 LVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLS 311
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K+ R +EA LK M G+ P TYTSL++ R G AL L +M + P+
Sbjct: 312 KAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDC 371
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY TLL G A+ + M ++E M+++G K + L++ G AE +VF
Sbjct: 372 TYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYA 431
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVP 222
+ D ++TL K+ K G VP
Sbjct: 432 VDSKSLSDASAYSTLETTLKW----------LKKAKEQGLVP 463
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 141/362 (38%), Gaps = 42/362 (11%)
Query: 158 NALIKMYGDRGMFAEMGKVFKEIKACQCS--PDIVTWNTLLAVFGQNGLDSEVSGVFKE- 214
N++++ YG + + K+F+ I Q + P T+ LL+ DS +S V +
Sbjct: 89 NSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLS-HACRAPDSSISNVHRVL 147
Query: 215 --MKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARG 272
M G P++ T + + + G D+A+ + K + E PD TYN +L L +
Sbjct: 148 NLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKC 207
Query: 273 GLWEQSEKVLSEMENG-RCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVL 331
+ + EM + KP+ V+++ L+ N K + L ++ + L
Sbjct: 208 KDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFL 267
Query: 332 LKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMY 391
T++ +EA + + K+ G+ D T N ++ + V + LK M
Sbjct: 268 YNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMV 327
Query: 392 ESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCR----- 446
++G+ Y SLM R + +L E+ +G P+ +YN +++ C+
Sbjct: 328 DAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMD 387
Query: 447 ------------------------------NGKMTEAKRILNEMKDPAPVPDVVTYNTFV 476
+GK+ EA + + D + D Y+T
Sbjct: 388 KGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLE 447
Query: 477 AT 478
T
Sbjct: 448 TT 449
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 57/101 (56%)
Query: 430 IEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAI 489
++PDL+S+ I+I C + + EA +++++ + PD YNT + + S EA+
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 490 GVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
GV + M ++G +PDQ TYN+++ K EEA ++ +
Sbjct: 286 GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTM 326
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 213/454 (46%), Gaps = 22/454 (4%)
Query: 20 LISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRG 79
L C+A L ++A+ + E + +G+ PD Y L++ K AM+++++ME G
Sbjct: 113 LYDLCKANRL-KKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHG 171
Query: 80 FPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAM 139
+P + VTY +L+ G L ++L+ ++++K + P+ +TY+ LL + + A+
Sbjct: 172 YPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAV 231
Query: 140 RVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVF 199
++ +E+ G +PN+ ++N L+ + G + +F+E+ A ++V++N LL
Sbjct: 232 KLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCL 291
Query: 200 GQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAG----V 255
+G E + + EM P T+N LI++ + G +QA V K M + V
Sbjct: 292 CCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRV 351
Query: 256 TPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNA 315
T ++YN V+A L + G + K L EM RCKPNE TY+++ G E +
Sbjct: 352 TA--TSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAI------GSLCEHNSK 403
Query: 316 LAEEIY-------SGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLN 368
+ E Y K TH + + K + A A E + G D T +
Sbjct: 404 VQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFA-AFQLLYEMTRCGFDPDAHTYS 462
Query: 369 AMLSLYGRKKLVAKTNKILKFMYES-GFTLSLPGYNSLMYLHSRTRNFRKSEMILREILE 427
A++ + + ++L M ES ++ +N+++ + R + + ++E
Sbjct: 463 ALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVE 522
Query: 428 KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMK 461
K P+ +Y I++ ++ AK +L+E++
Sbjct: 523 KKRMPNETTYAILVEGIAHEDELELAKEVLDELR 556
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 106/477 (22%), Positives = 206/477 (43%), Gaps = 42/477 (8%)
Query: 46 RPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALE 105
+PD+ + + D ++ L+ + + G P++ T L+ + L++A+
Sbjct: 68 KPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIR 127
Query: 106 LKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYG 165
+ MV I PD YT L++ AM++ E+M G N T+NAL++
Sbjct: 128 VIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLC 187
Query: 166 DRGMFAEMGKVFKEIKACQCSPDIVTWNTLL-AVFGQNGLDSEVSGVFKEMKRAGFVPER 224
G + + + + +P+ T++ LL A + + G D V + E+ G P
Sbjct: 188 MLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVK-LLDEIIVKGGEPNL 246
Query: 225 ETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSE 284
++N L++ + + G D A A+++ + G ++ +YN +L L G WE++ +L+E
Sbjct: 247 VSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAE 306
Query: 285 MENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDF 344
M+ G P+ VTY+ L+++ A + G+ +LK + N +F
Sbjct: 307 MDGGDRAPSVVTYNILINSLA---------------FHGRTEQALQVLKEMSKGNHQFRV 351
Query: 345 LAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPG--- 401
A T+ N +++ ++ K + ++K + E + P
Sbjct: 352 TA------------------TSYNPVIARLCKE---GKVDLVVKCLDEMIYRRCKPNEGT 390
Query: 402 YNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMK 461
YN++ L +++ I++ + K Y VI + CR G A ++L EM
Sbjct: 391 YNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMT 450
Query: 462 DPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIK-QGCKPDQNTYNSIVDWYCKL 517
PD TY+ + MF A+ V+ M + + CKP + +N+++ CK+
Sbjct: 451 RCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKI 507
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 145/300 (48%), Gaps = 3/300 (1%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
+ +GLAP+ T++ L+ +EA++L +EI + G P++V+YN LL + K R
Sbjct: 202 LMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGR 261
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+AM + +++ ++GF ++V+Y L+ DG EEA L +M P V TY
Sbjct: 262 TDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNI 321
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNI--CTFNALIKMYGDRGMFAEMGKVFKEIKA 182
L++ + E A++V +EM + + ++N +I G + K E+
Sbjct: 322 LINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIY 381
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
+C P+ T+N + ++ N E + + + + + ++I++ R G+
Sbjct: 382 RRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFA 441
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGR-CKPNEVTYSSLL 301
A + M G PD TY+A++ L G++ + +VLS ME CKP +++++
Sbjct: 442 AFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMI 501
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/486 (22%), Positives = 205/486 (42%), Gaps = 42/486 (8%)
Query: 32 EALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLI 91
++ E + G +P++ LL K+ R K+A+ V++ M S G P YT L+
Sbjct: 89 DSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLV 148
Query: 92 SAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCK 151
+ + G + A++L +M + + TY L+ G +++ E + G
Sbjct: 149 NQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLA 208
Query: 152 PNICTFNALIK-MYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
PN T++ L++ Y +RG E K+ EI P++V++N LL F + G +
Sbjct: 209 PNAFTYSFLLEAAYKERGT-DEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMA 267
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
+F+E+ GF ++N L+ G +++A ++ M P + TYN ++ +LA
Sbjct: 268 LFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLA 327
Query: 271 RGGLWEQSEKVLSEMENG--RCKPNEVTYSSLLHAYAN-GKEFEKMNALAEEIYSGKITT 327
G EQ+ +VL EM G + + +Y+ ++ GK + L E IY
Sbjct: 328 FHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIY------ 381
Query: 328 HAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKIL 387
+R P++ T NA+ SL V + I+
Sbjct: 382 -----------------------------RRCKPNE-GTYNAIGSLCEHNSKVQEAFYII 411
Query: 388 KFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRN 447
+ + + Y S++ R N + +L E+ G +PD +Y+ +I C
Sbjct: 412 QSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLE 471
Query: 448 GKMTEAKRILNEMKDPAPV-PDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNT 506
G T A +L+ M++ P V +N + A+ V + M+++ P++ T
Sbjct: 472 GMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETT 531
Query: 507 YNSIVD 512
Y +V+
Sbjct: 532 YAILVE 537
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 156/331 (47%), Gaps = 9/331 (2%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L ++ +G P+L ++N L++ C+ G ++A+ LF E+ G + ++V+YN LL
Sbjct: 233 LLDEIIVKGGEPNLVSYNVLLTGFCKEGRT-DDAMALFRELPAKGFKANVVSYNILLRCL 291
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVE--KHIKP 117
R +EA +L +M+ PS+VTY LI++ G E+AL++ +M + +
Sbjct: 292 CCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRV 351
Query: 118 DVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVF 177
+Y +++ K +L ++ +EM CKPN T+NA+ + E +
Sbjct: 352 TATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYII 411
Query: 178 KEIKACQ--CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYS 235
+ + Q C+ D + +++ + G + EM R GF P+ T++ LI
Sbjct: 412 QSLSNKQKCCTHDF--YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLC 469
Query: 236 RCGSFDQARAVYKRMLEA-GVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNE 294
G F A V M E+ P + +NA++ L + + + +V M + PNE
Sbjct: 470 LEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNE 529
Query: 295 VTYSSLLHAYANGKEFEKMNALAEEIYSGKI 325
TY+ L+ A+ E E + +E+ K+
Sbjct: 530 TTYAILVEGIAHEDELELAKEVLDELRLRKV 560
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 133/278 (47%), Gaps = 1/278 (0%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV 71
PD CT+N LI C +++AL+LF+E+ ++P VT+ L+ K R KEA+++
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 72 LKQM-ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFV 130
M + G P++ Y SLI A + G L A +LK++ E IK D Y+TL+S +
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 131 NAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIV 190
A + + EEM GCKP+ T+N LI + +V E+ PD++
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVI 329
Query: 191 TWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRM 250
++N +L VF + E + +F++M R G P+ ++ + F++A + M
Sbjct: 330 SYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEM 389
Query: 251 LEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENG 288
L G P L L G E KV+S + G
Sbjct: 390 LFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHRG 427
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 149/312 (47%), Gaps = 2/312 (0%)
Query: 10 LAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAM 69
+ P F +I+ G L AL +F+E+ + + + N+LL K ++
Sbjct: 79 IVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMK 138
Query: 70 EVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGF 129
E L ++ G P TY LI + G ++AL+L ++MV+K +KP T+ TL+ G
Sbjct: 139 ERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGL 197
Query: 130 VNAKKDELAMRVFEEM-RTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPD 188
+ + A+++ +M + G +P + + +LIK G + K+ E + D
Sbjct: 198 CKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVD 257
Query: 189 IVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYK 248
++TL++ + G +EVS + +EM G P+ T+N LI+ + + A V
Sbjct: 258 AAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLD 317
Query: 249 RMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGK 308
M+E G+ PD+ +YN +L R WE++ + +M C P+ ++Y + G
Sbjct: 318 EMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGL 377
Query: 309 EFEKMNALAEEI 320
+FE+ + +E+
Sbjct: 378 QFEEAAVILDEM 389
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 170/398 (42%), Gaps = 52/398 (13%)
Query: 138 AMRVFEEMRTAGCKP------NICTFNALIKMYGDRGMFAEMGKVFKEIKA-CQCSPDIV 190
AM++F P ++ ++ +I G MF E+ +V +K + P +
Sbjct: 25 AMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEI 84
Query: 191 TWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRM 250
+ ++ FG+ L S +F EM + ++ N+L+SA +CG ++ + +
Sbjct: 85 IFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSI 144
Query: 251 LEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG--- 307
E G PD TYN ++ ++ G ++ + K+ EM + KP VT+ +L+H
Sbjct: 145 DEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRV 203
Query: 308 KEFEKMNALAEEIYSGKITTH--AVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDIT 365
KE KM ++Y + T H A L+K L + E AF
Sbjct: 204 KEALKMKHDMLKVYGVRPTVHIYASLIKALCQI-------GELSFAF------------- 243
Query: 366 TLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREI 425
K+ YE + Y++L+ + + MIL E+
Sbjct: 244 -------------------KLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEM 284
Query: 426 LEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMF 485
EKG +PD ++YN++I +C A R+L+EM + PDV++YN + + +
Sbjct: 285 SEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKW 344
Query: 486 GEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEA 523
EA + + M ++GC PD +Y + D C+ EEA
Sbjct: 345 EEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEA 382
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 179/455 (39%), Gaps = 64/455 (14%)
Query: 65 PKEAMEVLKQME------SRGFPPSIVTY----TSLISAYVRDGLLEEALELKNQMVEKH 114
P AM++ + + R F S++ Y T L + + D L + L LK +
Sbjct: 22 PSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHLKT---DTR 78
Query: 115 IKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC------------------------ 150
I P + +++ F K A+ +F+EM C
Sbjct: 79 IVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMK 138
Query: 151 ----------KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFG 200
KP+ CT+N LI G F + K+F E+ + P VT+ TL+
Sbjct: 139 ERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLI---- 194
Query: 201 QNGL--DSEVSGVFK----EMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAG 254
+GL DS V K +K G P + +LI A + G A + E
Sbjct: 195 -HGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGK 253
Query: 255 VTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMN 314
+ D + Y+ ++++L + G + +L EM CKP+ VTY+ L++ + + E N
Sbjct: 254 IKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESAN 313
Query: 315 ALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLY 374
+ +E+ + + ++ V + EA + F + +RG D + +
Sbjct: 314 RVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGL 373
Query: 375 GRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREI--LEKGIEP 432
+ IL M G+ P + L + K E++ + I L +GI
Sbjct: 374 CEGLQFEEAAVILDEMLFKGYK---PRRDRLEGFLQKLCESGKLEILSKVISSLHRGIAG 430
Query: 433 DLISYNIVIYAYCRNGKMTEA-KRILNEMKDPAPV 466
D ++++I C+ ++++ +LN +K+ P+
Sbjct: 431 DADVWSVMIPTMCKEPVISDSIDLLLNTVKEDGPL 465
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 70/145 (48%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +M +G PD T+N LI+ + E A + +E+ GL+PD+++YN +L V+
Sbjct: 280 ILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFF 339
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ ++ +EA + + M RG P ++Y + EEA + ++M+ K KP
Sbjct: 340 RIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRD 399
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEM 145
L + K E+ +V +
Sbjct: 400 RLEGFLQKLCESGKLEILSKVISSL 424
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/520 (22%), Positives = 227/520 (43%), Gaps = 59/520 (11%)
Query: 32 EALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLI 91
EA +F+ + G RP +++Y LL ++ ++ ++E G + + ++I
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 92 SAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAG-- 149
+A+ G +E+A++ +M E + P TY TL+ G+ A K E + + + M G
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 150 -CKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNG--LDS 206
PNI TFN L++ + + E +V K+++ C PD VT+NT+ + Q G + +
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA 242
Query: 207 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVL 266
E V K + + P T ++ Y R G +RM E V +L +N+++
Sbjct: 243 ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLI 302
Query: 267 AA----LARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYS 322
+ R G+ +EVT + LL ++ N E + +
Sbjct: 303 NGFVEVMDRDGI------------------DEVTLTLLLMSF---------NEEVELVGN 335
Query: 323 GKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAK 382
K+ + L K+ + D+ T + +++ + + K
Sbjct: 336 QKMKVQVLTL----------------------MKECNVKADVITYSTVMNAWSSAGYMEK 373
Query: 383 TNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIY 442
++ K M ++G Y+ L + R + +K+E +L ++ + P+++ + VI
Sbjct: 374 AAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVIS 432
Query: 443 AYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKP 502
+C NG M +A R+ N+M P++ T+ T + Y +A V+Q M G KP
Sbjct: 433 GWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKP 492
Query: 503 DQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEK 542
+ +T+ + + + L +E+ ++ L D+ +++ EK
Sbjct: 493 ENSTFLLLAEAWRVAGLTDESNKAINALKCKDIEIAKLEK 532
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 177/403 (43%), Gaps = 24/403 (5%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
++ +++ G D FN +I+ E+A++ ++K GL P TYN L+ YG
Sbjct: 102 IVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYG 161
Query: 61 KSRRPKEAMEVLKQMESRG---FPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKP 117
+ +P+ + E+L M G P+I T+ L+ A+ + +EEA E+ +M E ++P
Sbjct: 162 IAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRP 221
Query: 118 DVYTYTTLLSGFVNAKKDELA-MRVFEEM-RTAGCKPNICTFNALIKMYGDRGMFAEMGK 175
D TY T+ + +V + A V E+M KPN T ++ Y G + +
Sbjct: 222 DTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLR 281
Query: 176 VFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYS 235
+ +K + ++V +N+L ++G + M R G + T L+ +++
Sbjct: 282 FVRRMKEMRVEANLVVFNSL------------INGFVEVMDRDGI--DEVTLTLLLMSFN 327
Query: 236 R----CGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCK 291
G+ V M E V D+ TY+ V+ A + G E++ +V EM K
Sbjct: 328 EEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVK 387
Query: 292 PNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHA 351
P+ YS L Y KE +K L E + + + V+ T++ + +A
Sbjct: 388 PDAHAYSILAKGYVRAKEPKKAEELLETLIV-ESRPNVVIFTTVISGWCSNGSMDDAMRV 446
Query: 352 FLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESG 394
F + K G+ +I T ++ Y K K ++L+ M G
Sbjct: 447 FNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCG 489
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 105/183 (57%), Gaps = 5/183 (2%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L MK + D+ T++T+++ + E+A ++F+E+ AG++PD Y+ L Y
Sbjct: 342 VLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYV 401
Query: 61 KSRRPKEAMEVLKQM--ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPD 118
+++ PK+A E+L+ + ESR P++V +T++IS + +G +++A+ + N+M + + P+
Sbjct: 402 RAKEPKKAEELLETLIVESR---PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPN 458
Query: 119 VYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFK 178
+ T+ TL+ G++ K+ A V + MR G KP TF L + + G+ E K
Sbjct: 459 IKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAIN 518
Query: 179 EIK 181
+K
Sbjct: 519 ALK 521
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 167/377 (44%), Gaps = 17/377 (4%)
Query: 160 LIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAG 219
L+ + +RG E VFK + P ++++ TLLA +S + E++++G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 220 FVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSE 279
+ FN +I+A+S G+ + A +M E G+ P STYN ++ G E+S
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 280 KVLSEM-ENGRCK--PNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLV 336
++L M E G PN T++ L+ A+ K+ E+ + +++ + V T+
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 337 LVNSKFDFLAEAEHAFLE---FKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYES 393
+ AE +E K++ P+ T ++ Y R+ V + ++ M E
Sbjct: 231 TCYVQKGETVRAESEVVEKMVMKEKAKPNG-RTCGIVVGGYCREGRVRDGLRFVRRMKEM 289
Query: 394 GFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEA 453
+L +NSL+ + + + +L L+S+N + N KM
Sbjct: 290 RVEANLVVFNSLINGFVEVMDRDGIDEVTLTLL-------LMSFNEEV-ELVGNQKM--K 339
Query: 454 KRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDW 513
++L MK+ DV+TY+T + +++ +A V + M+K G KPD + Y+ +
Sbjct: 340 VQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKG 399
Query: 514 YCKLHLREEAYNFVHNL 530
Y + ++A + L
Sbjct: 400 YVRAKEPKKAEELLETL 416
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 202/412 (49%), Gaps = 5/412 (1%)
Query: 52 YNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMV 111
Y +L+DV ++ V +++ FP ++ +LI ++ + G++EE L + +M
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 214
Query: 112 EKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFA 171
E I+P +YTY L++G V+A + A RVFE M + KP+I T+N +IK Y G
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 172 EMGKVFKEIKACQCSPDIVTWNTLL-AVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTL 230
+ + ++++ D +T+ T++ A + + S V+ +++EM G F+ +
Sbjct: 275 KAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVA-LYQEMDEKGIQVPPHAFSLV 333
Query: 231 ISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRC 290
I + G ++ V++ M+ G P+++ Y ++ A+ G E + ++L M +
Sbjct: 334 IGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGF 393
Query: 291 KPNEVTYSSLLHAYA-NGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAE 349
KP+ VTYS +++ NG+ E ++ + G + +++ +L+ K + EAE
Sbjct: 394 KPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDG-LAINSMFYSSLIDGLGKAGRVDEAE 452
Query: 350 HAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFM-YESGFTLSLPGYNSLMYL 408
F E ++G D NA++ + + + V + + K M E G ++ Y L+
Sbjct: 453 RLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSG 512
Query: 409 HSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEM 460
+ ++ + +++KGI P + + C +GK+ A +IL+E+
Sbjct: 513 MFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDEL 564
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 151/332 (45%), Gaps = 1/332 (0%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
MK G+ P L T+N L++ + + A +FE ++ ++PD+VTYN ++ Y K+ +
Sbjct: 213 MKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQ 272
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
++AME L+ ME+RG +TY ++I A D + L +M EK I+ + ++
Sbjct: 273 TQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSL 332
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
++ G K VFE M G KPN+ + LI Y G + ++ +
Sbjct: 333 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 392
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
PD+VT++ ++ +NG E F + G +++LI + G D+A
Sbjct: 393 FKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAE 452
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGR-CKPNEVTYSSLLHA 303
+++ M E G T D YNA++ A + +++ + ME C TY+ LL
Sbjct: 453 RLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSG 512
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTL 335
E+ L + + IT A + L
Sbjct: 513 MFKEHRNEEALKLWDMMIDKGITPTAACFRAL 544
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 141/285 (49%), Gaps = 1/285 (0%)
Query: 2 LMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGK 61
L DM+++G D T+ T+I C A S + + L++E+ G++ ++ ++ K
Sbjct: 280 LRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCK 339
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYT 121
+ E V + M +G P++ YT LI Y + G +E+A+ L ++M+++ KPDV T
Sbjct: 340 EGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVT 399
Query: 122 YTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK 181
Y+ +++G + E A+ F R G N +++LI G G E ++F+E+
Sbjct: 400 YSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMS 459
Query: 182 ACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEM-KRAGFVPERETFNTLISAYSRCGSF 240
C+ D +N L+ F ++ E +FK M + G T+ L+S +
Sbjct: 460 EKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRN 519
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM 285
++A ++ M++ G+TP + + A+ L G ++ K+L E+
Sbjct: 520 EEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDEL 564
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 157/340 (46%), Gaps = 22/340 (6%)
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
V E+K+ F N LI ++ + G ++ V+++M E G+ P L TYN ++ L
Sbjct: 174 VSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLV 233
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG----KEFEKMNALAEEIYSGKIT 326
+ +E+V ME+GR KP+ VTY++++ Y K EK+ + +
Sbjct: 234 SAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKI 293
Query: 327 THAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI---PHDITTLNAMLSLYGRKKLVAKT 383
T+ +++ +S F + E ++GI PH + + L G+ + +
Sbjct: 294 TYMTMIQA-CYADSDF---GSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGK---LNEG 346
Query: 384 NKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYA 443
+ + M G ++ Y L+ ++++ + + +L ++++G +PD+++Y++V+
Sbjct: 347 YTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNG 406
Query: 444 YCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPD 503
C+NG++ EA + + + + Y++ + EA + + M ++GC D
Sbjct: 407 LCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRD 466
Query: 504 QNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEKG 543
YN+++D + K +EA + EEE+G
Sbjct: 467 SYCYNALIDAFTKHRKVDEAIALFKRM--------EEEEG 498
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 132/297 (44%), Gaps = 3/297 (1%)
Query: 1 MLMDMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+ +M +G+ F+ +I C+ G L E +FE + G +P++ Y L+D Y
Sbjct: 314 LYQEMDEKGIQVPPHAFSLVIGGLCKEGKL-NEGYTVFENMIRKGSKPNVAIYTVLIDGY 372
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
KS ++A+ +L +M GF P +VTY+ +++ ++G +EEAL+ + + +
Sbjct: 373 AKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINS 432
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
Y++L+ G A + + A R+FEEM GC + +NALI + E +FK
Sbjct: 433 MFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKR 492
Query: 180 IKACQ-CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 238
++ + C + T+ LL+ + + E ++ M G P F L + G
Sbjct: 493 MEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSG 552
Query: 239 SFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEV 295
+A + + GV D + + + G + E + E GR P +
Sbjct: 553 KVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRI 609
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 155/333 (46%), Gaps = 1/333 (0%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
MKS+ + + TF LI L EA+ F ++ G PD + ++ ++ + RR
Sbjct: 177 MKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRR 236
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
EA ++ R F P ++ YT+L+ + R G + EA ++ +M I+P+VYTY+
Sbjct: 237 ASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSI 295
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
++ + A VF +M +GC PN TFN L++++ G ++ +V+ ++K
Sbjct: 296 VIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLG 355
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
C PD +T+N L+ ++ V M + TFNT+ + + A
Sbjct: 356 CEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAH 415
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
+Y +M+EA P+ TYN ++ + K+ EM++ +PN TY L+ +
Sbjct: 416 RMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMF 475
Query: 305 ANGKEFEKMNALAEEIYSGKITTHAVLLKTLVL 337
+ L +E+ K T ++ L +VL
Sbjct: 476 CGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVL 508
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 144/276 (52%), Gaps = 3/276 (1%)
Query: 12 PDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAME 70
PD+ + L+ CRAG + EA ++F+E+KLAG+ P++ TY+ ++D + + A +
Sbjct: 253 PDVIVYTNLVRGWCRAGEI-SEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHD 311
Query: 71 VLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFV 130
V M G P+ +T+ +L+ +V+ G E+ L++ NQM + +PD TY L+
Sbjct: 312 VFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHC 371
Query: 131 NAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIV 190
+ E A++V M C+ N TFN + + + +++ ++ +C P+ V
Sbjct: 372 RDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTV 431
Query: 191 TWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRM 250
T+N L+ +F + V + KEM P T+ L++ + G ++ A ++K M
Sbjct: 432 TYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEM 491
Query: 251 LEAG-VTPDLSTYNAVLAALARGGLWEQSEKVLSEM 285
+E +TP LS Y VLA L R G ++ E+++ +M
Sbjct: 492 VEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKM 527
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 152/319 (47%), Gaps = 34/319 (10%)
Query: 52 YNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQM- 110
YN ++D+ GK R+ A ++ M+SR SI T+T LI YVR GL EA+ N+M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 111 ---------------------------------VEKHIKPDVYTYTTLLSGFVNAKKDEL 137
++ +PDV YT L+ G+ A +
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISE 273
Query: 138 AMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLA 197
A +VF+EM+ AG +PN+ T++ +I G + VF ++ C+P+ +T+N L+
Sbjct: 274 AEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMR 333
Query: 198 VFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTP 257
V + G +V V+ +MK+ G P+ T+N LI A+ R + + A V M++
Sbjct: 334 VHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEV 393
Query: 258 DLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALA 317
+ ST+N + + + + ++ S+M +C+PN VTY+ L+ + K + + +
Sbjct: 394 NASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMK 453
Query: 318 EEIYSGKITTHAVLLKTLV 336
+E+ ++ + + LV
Sbjct: 454 KEMDDKEVEPNVNTYRLLV 472
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 187/432 (43%), Gaps = 43/432 (9%)
Query: 74 QMESRGFPPSIVTYTSLISAYVRDGL-LEEALELKNQMVEK----HIKPDVYTYTTLLSG 128
Q+E+ PS+V VR G+ L ++L N + H P Y LSG
Sbjct: 103 QIETSQVSPSVVRCVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSG 162
Query: 129 FVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPD 188
V ++ +LA + + M++ + +I TF LI+ Y G+ +E F ++ C PD
Sbjct: 163 KV--RQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPD 220
Query: 189 IVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYK 248
+ ++ +++ + SE F +K F P+ + L+ + R G +A V+K
Sbjct: 221 KIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFK 279
Query: 249 RMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGK 308
M AG+ P++ TY+ V+ AL R G ++ V ++M + C PN +T+++L+ +
Sbjct: 280 EMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAG 339
Query: 309 EFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLN 368
EK+ ++Y+ + KK G D T N
Sbjct: 340 RTEKV----LQVYN-------------------------------QMKKLGCEPDTITYN 364
Query: 369 AMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEK 428
++ + R + + K+L M + ++ +N++ + R+ + + +++E
Sbjct: 365 FLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEA 424
Query: 429 GIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEA 488
EP+ ++YNI++ + + ++ EM D P+V TY V + + A
Sbjct: 425 KCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNA 484
Query: 489 IGVVQCMIKQGC 500
+ + M+++ C
Sbjct: 485 YKLFKEMVEEKC 496
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 184/401 (45%), Gaps = 43/401 (10%)
Query: 103 ALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIK 162
A L + M ++++ + T+T L+ +V A A+ F M GC P+ F+ +I
Sbjct: 170 AWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVIS 229
Query: 163 MYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVP 222
+ +E F +K + PD++ + L+ + + G SE VFKEMK AG P
Sbjct: 230 NLSRKRRASEAQSFFDSLKD-RFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEP 288
Query: 223 ERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVL 282
T++ +I A RCG +A V+ ML++G P+ T+N ++ + G E+ +V
Sbjct: 289 NVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVY 348
Query: 283 SEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKF 342
++M+ C+P+ +TY+ L+ A+ + E NA+ +L T++
Sbjct: 349 NQMKKLGCEPDTITYNFLIEAHCRDENLE--NAVK-------------VLNTMI------ 387
Query: 343 DFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGY 402
K+ + +T N + +K+ V +++ M E+ + Y
Sbjct: 388 --------------KKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTY 433
Query: 403 NSLMYLHSRTRNFRKSEMIL---REILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNE 459
N LM + +++ ++M+L +E+ +K +EP++ +Y +++ +C G A ++ E
Sbjct: 434 NILMRMFVGSKS---TDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKE 490
Query: 460 M-KDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQG 499
M ++ P + Y +A + +V+ MI++G
Sbjct: 491 MVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKG 531
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 139/255 (54%), Gaps = 5/255 (1%)
Query: 4 DMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
+MK G+ P++ T++ +I + CR G + A ++F ++ +G P+ +T+N L+ V+ K+
Sbjct: 280 EMKLAGIEPNVYTYSIVIDALCRCGQI-SRAHDVFADMLDSGCAPNAITFNNLMRVHVKA 338
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
R ++ ++V QM+ G P +TY LI A+ RD LE A+++ N M++K + + T+
Sbjct: 339 GRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTF 398
Query: 123 TTLLSGFVNAKKD-ELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK 181
T+ ++ K+D A R++ +M A C+PN T+N L++M+ + K+ KE+
Sbjct: 399 NTIFR-YIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMD 457
Query: 182 ACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEM-KRAGFVPERETFNTLISAYSRCGSF 240
+ P++ T+ L+ +F G + +FKEM + P + +++ R G
Sbjct: 458 DKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQL 517
Query: 241 DQARAVYKRMLEAGV 255
+ + ++M++ G+
Sbjct: 518 KKHEELVEKMIQKGL 532
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 134/337 (39%), Gaps = 71/337 (21%)
Query: 225 ETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSE 284
ETF LI Y R G +A + RM + G PD ++ V++ L+R +++
Sbjct: 187 ETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDS 246
Query: 285 MENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDF 344
+++ R +P+ + Y++L+ + E
Sbjct: 247 LKD-RFEPDVIVYTNLVRGWCRAGE----------------------------------- 270
Query: 345 LAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNS 404
++EAE F E K GI ++ T + ++ R +++ + + M +SG + +N+
Sbjct: 271 ISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNN 330
Query: 405 LMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEM-KDP 463
LM +H + K + ++ + G EPD I+YN +I A+CR+ + A ++LN M K
Sbjct: 331 LMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKK 390
Query: 464 APV----------------------------------PDVVTYNTFVATYAANSMFGEAI 489
V P+ VTYN + + + +
Sbjct: 391 CEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVL 450
Query: 490 GVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNF 526
+ + M + +P+ NTY +V +C + AY
Sbjct: 451 KMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKL 487
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 92/192 (47%), Gaps = 5/192 (2%)
Query: 325 ITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTN 384
I T +L++ V + +EA H F + G D + ++S RK+ ++
Sbjct: 186 IETFTILIRRYV----RAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQ 241
Query: 385 KILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAY 444
+ + F + Y +L+ R ++E + +E+ GIEP++ +Y+IVI A
Sbjct: 242 SFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDAL 300
Query: 445 CRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQ 504
CR G+++ A + +M D P+ +T+N + + + + V M K GC+PD
Sbjct: 301 CRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDT 360
Query: 505 NTYNSIVDWYCK 516
TYN +++ +C+
Sbjct: 361 ITYNFLIEAHCR 372
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/494 (21%), Positives = 220/494 (44%), Gaps = 9/494 (1%)
Query: 29 LYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYT 88
+ + A+++F+E++ + R YN + V + R + A + M+ GF TY+
Sbjct: 24 MIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYS 83
Query: 89 SLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTA 148
IS + + L + M PD++ + L K A++ F M
Sbjct: 84 RFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQR 143
Query: 149 GCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLL-AVFGQNGLDSE 207
G +P++ ++ LI G + +++ + SPD L+ + +D
Sbjct: 144 GREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLA 203
Query: 208 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLA 267
V +E+K A +N LIS + + G ++A A+ M + G PDL TYN +L
Sbjct: 204 YEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLN 263
Query: 268 ALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKM-NALAEEIYS---G 323
+ +++E V++EM + + +Y+ LL + +K N + +E+
Sbjct: 264 YYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC 323
Query: 324 KITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKT 383
+ +++ L++T ++ +A F E +++G+ ++ T +++ + R+ +
Sbjct: 324 DVVSYSTLIETFCRASNT----RKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVA 379
Query: 384 NKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYA 443
K+L M E G + Y +++ ++ N K+ + +++E I PD ISYN +I
Sbjct: 380 KKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISG 439
Query: 444 YCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPD 503
CR+G++TEA ++ +MK PD +T+ + A V M+ +G D
Sbjct: 440 LCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLD 499
Query: 504 QNTYNSIVDWYCKL 517
++ ++++ C +
Sbjct: 500 RDVSDTLIKASCSM 513
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/459 (22%), Positives = 199/459 (43%), Gaps = 15/459 (3%)
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
KS A++V +M + Y I VR+ E A + M +
Sbjct: 21 KSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPF 80
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY+ +SG KK +L + +M T G P+I FN + + + F +
Sbjct: 81 TYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCM 140
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
PD+V++ L+ + G ++ ++ M R+G P+ + L+
Sbjct: 141 VQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKV 200
Query: 241 DQA-RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
D A V + + A V YNA+++ + G E++E + S M C+P+ VTY+
Sbjct: 201 DLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNV 260
Query: 300 LLHAYANGKEFEKMNALAEEIYSGKITTHAV----LLKTLVLVNSK---FDFLAEAEHAF 352
LL+ Y + ++ + E+ I A LLK V+ ++F+ +
Sbjct: 261 LLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVK----- 315
Query: 353 LEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRT 412
E + RG D+ + + ++ + R K ++ + M + G +++ Y SL+ R
Sbjct: 316 -EMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLRE 373
Query: 413 RNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTY 472
N ++ +L ++ E G+ PD I Y ++ C++G + +A + N+M + PD ++Y
Sbjct: 374 GNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISY 433
Query: 473 NTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
N+ ++ + EAI + + M + C PD+ T+ I+
Sbjct: 434 NSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFII 472
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 192/439 (43%), Gaps = 36/439 (8%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
DMK G + T++ IS ++ L +++ G PD+ +N LD+ +
Sbjct: 69 DMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCREN 128
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ A++ M RG P +V+YT LI+ R G + +A+E+ N M+ + PD
Sbjct: 129 KVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACA 188
Query: 124 TLLSGFVNAKKDELAMR-VFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
L+ G +A+K +LA V EE+++A K + +NALI + G + + +
Sbjct: 189 ALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSK 248
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGF---------------------- 220
C PD+VT+N LL + N + GV EM R+G
Sbjct: 249 IGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDK 308
Query: 221 -----VPERE--------TFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLA 267
V E E +++TLI + R + +A +++ M + G+ ++ TY +++
Sbjct: 309 CYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIK 368
Query: 268 ALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITT 327
A R G ++K+L +M P+ + Y+++L +K + ++ +IT
Sbjct: 369 AFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITP 428
Query: 328 HAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKIL 387
A+ +L+ + + EA F + K + D T ++ R K ++ K+
Sbjct: 429 DAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVW 488
Query: 388 KFMYESGFTLSLPGYNSLM 406
M + GFTL ++L+
Sbjct: 489 DQMMDKGFTLDRDVSDTLI 507
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 191/449 (42%), Gaps = 40/449 (8%)
Query: 85 VTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEE 144
+ Y S I+ V+ G+++ A+++ ++M + + Y + V + ELA ++ +
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 145 MRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFG-QNG 203
M+ G T++ I F + + +++ PDI +N L + +N
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 204 LDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYN 263
+ V F ++R G P+ ++ LI+ R G A ++ M+ +GV+PD
Sbjct: 130 VGFAVQTFFCMVQR-GREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACA 188
Query: 264 AVLAALARGGLWEQS-EKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYS 322
A++ L + + E V E+++ R K + V Y++L+ + EK AL Y
Sbjct: 189 ALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKS--YM 246
Query: 323 GKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAK 382
KI G D+ T N +L+ Y ++ +
Sbjct: 247 SKI---------------------------------GCEPDLVTYNVLLNYYYDNNMLKR 273
Query: 383 TNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKS-EMILREILEKGIEPDLISYNIVI 441
++ M SG L YN L+ H R + K +++E+ +G D++SY+ +I
Sbjct: 274 AEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLI 332
Query: 442 YAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCK 501
+CR +A R+ EM+ V +VVTY + + + A ++ M + G
Sbjct: 333 ETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLS 392
Query: 502 PDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
PD+ Y +I+D CK ++AY +++
Sbjct: 393 PDRIFYTTILDHLCKSGNVDKAYGVFNDM 421
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 132/265 (49%), Gaps = 2/265 (0%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M G PDL T+N L++ ++ + A + E+ +G++ D +YN LL + +
Sbjct: 246 MSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSH 305
Query: 65 PKEAME-VLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
P + ++K+ME RGF +V+Y++LI + R +A L +M +K + +V TYT
Sbjct: 306 PDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYT 364
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
+L+ F+ +A ++ ++M G P+ + ++ G + VF ++
Sbjct: 365 SLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEH 424
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
+ +PD +++N+L++ ++G +E +F++MK P+ TF +I R A
Sbjct: 425 EITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAA 484
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAA 268
V+ +M++ G T D + ++ A
Sbjct: 485 YKVWDQMMDKGFTLDRDVSDTLIKA 509
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 121/234 (51%), Gaps = 2/234 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
++ +M G+ D ++N L+ CR + + +E++ G D+V+Y+ L++ +
Sbjct: 277 VMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETF 335
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
++ ++A + ++M +G ++VTYTSLI A++R+G A +L +QM E + PD
Sbjct: 336 CRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDR 395
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
YTT+L + + A VF +M P+ ++N+LI G E K+F++
Sbjct: 396 IFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFED 455
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISA 233
+K +C PD +T+ ++ + S V+ +M GF +R+ +TLI A
Sbjct: 456 MKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKA 509
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 71/136 (52%), Gaps = 2/136 (1%)
Query: 1 MLMDMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L M GL+PD + T++ C++G++ ++A +F ++ + PD ++YN+L+
Sbjct: 382 LLDQMTELGLSPDRIFYTTILDHLCKSGNV-DKAYGVFNDMIEHEITPDAISYNSLISGL 440
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
+S R EA+++ + M+ + P +T+ +I +R L A ++ +QM++K D
Sbjct: 441 CRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDR 500
Query: 120 YTYTTLLSGFVNAKKD 135
TL+ + D
Sbjct: 501 DVSDTLIKASCSMSAD 516
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 115/296 (38%), Gaps = 17/296 (5%)
Query: 262 YNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIY 321
Y + +A L + G+ + + +V EM + + Y+ + FE LAE IY
Sbjct: 12 YRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFE----LAEAIY 67
Query: 322 --------SGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSL 373
S T++ + L V KFD + + + + G DI N L L
Sbjct: 68 WDMKPMGFSLIPFTYSRFISGLCKVK-KFDLI---DALLSDMETLGFIPDIWAFNVYLDL 123
Query: 374 YGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPD 433
R+ V + M + G + Y L+ R + I ++ G+ PD
Sbjct: 124 LCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPD 183
Query: 434 LISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVP-DVVTYNTFVATYAANSMFGEAIGVV 492
+ ++ C K+ A ++ E A V V YN ++ + +A +
Sbjct: 184 NKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALK 243
Query: 493 QCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEKGRLLER 548
M K GC+PD TYN ++++Y ++ + A + + + + +LL+R
Sbjct: 244 SYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKR 299
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 172/358 (48%), Gaps = 38/358 (10%)
Query: 42 LAGLRP--DMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGL 99
L ++P +++ YN + V+ KS+ +++ ++ +M RG P T+T++IS ++G+
Sbjct: 166 LETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGV 225
Query: 100 LEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNA 159
+ A+E +M +PD T ++ + A ++A+ +++ RT + + TF+
Sbjct: 226 PKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFST 285
Query: 160 LIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAG 219
LI++YG G + +++E+KA P++V +N L+ G+ + ++K++ G
Sbjct: 286 LIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNG 345
Query: 220 FVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSE 279
F P T+ L+ AY R D A A+Y+ M E G++ + YN +L+ A +++
Sbjct: 346 FTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAF 405
Query: 280 KVLSEMENGR-CKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLV 338
++ +M+N C P+ T+SSL+ YA SG+++
Sbjct: 406 EIFQDMKNCETCDPDSWTFSSLITVYA---------------CSGRVS------------ 438
Query: 339 NSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFT 396
EAE A L+ ++ G + L +++ YG+ K V + + E G T
Sbjct: 439 --------EAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGIT 488
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 137/270 (50%), Gaps = 1/270 (0%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M +G+ PD TF T+ISC R + + A+E FE++ G PD VT A++D YG++
Sbjct: 200 EMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAG 259
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
A+ + + + + VT+++LI Y G + L + +M +KP++ Y
Sbjct: 260 NVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYN 319
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
L+ AK+ A +++++ T G PN T+ AL++ YG + +++E+K
Sbjct: 320 RLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEK 379
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFV-PERETFNTLISAYSRCGSFDQ 242
S ++ +NTLL++ N E +F++MK P+ TF++LI+ Y+ G +
Sbjct: 380 GLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSE 439
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARG 272
A A +M EAG P L +V+ +
Sbjct: 440 AEAALLQMREAGFEPTLFVLTSVIQCYGKA 469
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 118/247 (47%), Gaps = 36/247 (14%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVL 72
D TF+TLI Y+ L ++EE+K G++P++V YN L+D G+++RP +A +
Sbjct: 279 DAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIY 338
Query: 73 KQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNA 132
K + + GF P+ TY +L+ AY R ++AL + +M EK + V Y TLLS +
Sbjct: 339 KDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADN 398
Query: 133 KKDELAMRVFEEMRTA-GCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVT 191
+ + A +F++M+ C P+ TF++LI +Y AC
Sbjct: 399 RYVDEAFEIFQDMKNCETCDPDSWTFSSLITVY-----------------AC-------- 433
Query: 192 WNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRML 251
+G SE +M+ AGF P ++I Y + D + ++L
Sbjct: 434 ----------SGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVL 483
Query: 252 EAGVTPD 258
E G+TPD
Sbjct: 484 ELGITPD 490
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 150/311 (48%), Gaps = 1/311 (0%)
Query: 17 FNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQME 76
+N + R E++ +LF+E+ G++PD T+ ++ ++ PK A+E ++M
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMS 237
Query: 77 SRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDE 136
S G P VT ++I AY R G ++ AL L ++ + + D T++TL+ + + +
Sbjct: 238 SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYD 297
Query: 137 LAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLL 196
+ ++EEM+ G KPN+ +N LI G + ++K++ +P+ T+ L+
Sbjct: 298 GCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALV 357
Query: 197 AVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEA-GV 255
+G+ + +++EMK G +NTL+S + D+A +++ M
Sbjct: 358 RAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETC 417
Query: 256 TPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNA 315
PD T+++++ A G ++E L +M +P +S++ Y K+ + +
Sbjct: 418 DPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVR 477
Query: 316 LAEEIYSGKIT 326
+++ IT
Sbjct: 478 TFDQVLELGIT 488
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 153/329 (46%), Gaps = 4/329 (1%)
Query: 108 NQMVEKHIKP--DVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYG 165
N ++E +KP +V Y + F +K E + ++F+EM G KP+ TF +I
Sbjct: 163 NNLLET-MKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCAR 221
Query: 166 DRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERE 225
G+ + F+++ + C PD VT ++ +G+ G ++ + + +
Sbjct: 222 QNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAV 281
Query: 226 TFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM 285
TF+TLI Y G++D +Y+ M GV P+L YN ++ ++ R Q++ + ++
Sbjct: 282 TFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDL 341
Query: 286 ENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFL 345
PN TY++L+ AY + + A+ E+ ++ +L TL+ + + ++
Sbjct: 342 ITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYV 401
Query: 346 AEAEHAFLEFKK-RGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNS 404
EA F + K D T ++++++Y V++ L M E+GF +L S
Sbjct: 402 DEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTS 461
Query: 405 LMYLHSRTRNFRKSEMILREILEKGIEPD 433
++ + + + ++LE GI PD
Sbjct: 462 VIQCYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 137/298 (45%), Gaps = 3/298 (1%)
Query: 222 PERET--FNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSE 279
P RE +N + + + +++ ++ MLE G+ PD +T+ +++ + G+ +++
Sbjct: 171 PSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAV 230
Query: 280 KVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVN 339
+ +M + C+P+ VT ++++ AY + +L + + K AV TL+ +
Sbjct: 231 EWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIY 290
Query: 340 SKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSL 399
+ + E K G+ ++ N ++ GR K + I K + +GFT +
Sbjct: 291 GVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNW 350
Query: 400 PGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNE 459
Y +L+ + R R + I RE+ EKG+ +I YN ++ N + EA I +
Sbjct: 351 STYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQD 410
Query: 460 MKDPAPV-PDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
MK+ PD T+++ + YA + EA + M + G +P S++ Y K
Sbjct: 411 MKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGK 468
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 146/320 (45%), Gaps = 1/320 (0%)
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
S +++ +N + VF ++ + +F EM G P+ TF T+IS + G +A
Sbjct: 172 SREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVE 231
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA 305
+++M G PD T A++ A R G + + + + + + VT+S+L+ Y
Sbjct: 232 WFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYG 291
Query: 306 NGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDIT 365
++ + EE+ + + + V+ L+ + +A+ + + G + +
Sbjct: 292 VSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWS 351
Query: 366 TLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREI 425
T A++ YGR + I + M E G +L++ YN+L+ + + R ++ I +++
Sbjct: 352 TYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDM 411
Query: 426 LE-KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSM 484
+ +PD +++ +I Y +G+++EA+ L +M++ P + + + Y
Sbjct: 412 KNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQ 471
Query: 485 FGEAIGVVQCMIKQGCKPDQ 504
+ + +++ G PD
Sbjct: 472 VDDVVRTFDQVLELGITPDD 491
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 71/136 (52%), Gaps = 1/136 (0%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIK-LAGLRPDMVTYNALLDVYGKS 62
+MK +GL+ + +NTL+S C +EA E+F+++K PD T+++L+ VY S
Sbjct: 375 EMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACS 434
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
R EA L QM GF P++ TS+I Y + +++ + +Q++E I PD
Sbjct: 435 GRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFC 494
Query: 123 TTLLSGFVNAKKDELA 138
LL+ +E+
Sbjct: 495 GCLLNVMTQTPSEEIG 510
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/236 (19%), Positives = 94/236 (39%)
Query: 295 VTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLE 354
+ Y+ + + K+ EK L +E+ I T++ + A F +
Sbjct: 176 ILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEK 235
Query: 355 FKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRN 414
G D T+ AM+ YGR V + + + +++L+ ++ + N
Sbjct: 236 MSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGN 295
Query: 415 FRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNT 474
+ I E+ G++P+L+ YN +I + R + +AK I ++ P+ TY
Sbjct: 296 YDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAA 355
Query: 475 FVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
V Y +A+ + + M ++G YN+++ +EA+ ++
Sbjct: 356 LVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDM 411
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/555 (21%), Positives = 232/555 (41%), Gaps = 45/555 (8%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIK-LAGLRPDMVTYNALLDVYGKSRRPKEAME 70
P N L+ R + E +FE++K + + D +YN + +G A+
Sbjct: 210 PGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALS 269
Query: 71 VLKQMESRG------FPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+ K+M+ R F P I TY SLI G ++AL + +++ +PD TY
Sbjct: 270 LFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRI 329
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
L+ G + + + AMR++ EM+ G P+ +N L+ E ++F+++
Sbjct: 330 LIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEG 389
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
T+N L+ +NG +F ++K+ G + TF+ + R G + A
Sbjct: 390 VRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAV 449
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
+ + M G + DL T +++L + G W+ EK++ + G PN + +++ + A
Sbjct: 450 KLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEAS 509
Query: 305 ANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLE---------- 354
K ++ Y+ + L + +V S+ D + E + +E
Sbjct: 510 L------KRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYM 563
Query: 355 ---FKKRGIPH------------------DITTLNAMLSLYGRKKLVAKTNKILKFMYES 393
+R P D+ +N LS+Y K ++ K+ +
Sbjct: 564 DQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGM 623
Query: 394 GFT-LSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTE 452
G T L+ YNS+M + F+ + +L ++ E D+ +YN++I + G+
Sbjct: 624 GVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADL 683
Query: 453 AKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
A +L+ + D+V YNT + + EA + M G PD +YN++++
Sbjct: 684 ASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIE 743
Query: 513 WYCKLHLREEAYNFV 527
K +EAY ++
Sbjct: 744 VNSKAGKLKEAYKYL 758
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/510 (23%), Positives = 228/510 (44%), Gaps = 16/510 (3%)
Query: 10 LAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAM 69
PD+CT+N+LI ++AL +++E+K++G PD TY L+ KS R +AM
Sbjct: 285 FGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAM 344
Query: 70 EVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGF 129
+ +M+ GF P + Y L+ ++ + EA +L +MV++ ++ +TY L+ G
Sbjct: 345 RIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGL 404
Query: 130 VNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDI 189
+ E +F +++ G + TF+ + G K+ +E++ S D+
Sbjct: 405 FRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDL 464
Query: 190 VTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISA-YSRCGSFDQARAVYK 248
VT ++LL F + G + K ++ VP +N + A R S D+ Y
Sbjct: 465 VTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKD---YT 521
Query: 249 RMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGK 308
M P ++ +++ + +E+V S ME+ + L H K
Sbjct: 522 PMF-----PSKGSFLDIMSMVGSEDDGASAEEV-SPMEDDPWSSSPYM-DQLAHQRNQPK 574
Query: 309 EFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDIT--T 366
+ A + + + + ++ T + + L+ A F F G+ D+T T
Sbjct: 575 PLFGL-ARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVT-DLTSYT 632
Query: 367 LNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREIL 426
N+M+S + +K +L M+E+ + YN ++ + + +L +
Sbjct: 633 YNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLT 692
Query: 427 EKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFG 486
++G D++ YN +I A + ++ EA ++ + MK PDVV+YNT + +
Sbjct: 693 KQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLK 752
Query: 487 EAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
EA ++ M+ GC P+ T ++I+D+ K
Sbjct: 753 EAYKYLKAMLDAGCLPNHVT-DTILDYLGK 781
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 95/441 (21%), Positives = 170/441 (38%), Gaps = 96/441 (21%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
++K G PD T+ LI C ++A+ ++ E++ G PD + YN LLD K+R
Sbjct: 314 ELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKAR 373
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGL------------------------ 99
+ EA ++ ++M G S TY LI R+G
Sbjct: 374 KVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFS 433
Query: 100 -----------LEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTA 148
LE A++L +M + D+ T ++LL GF + + ++ + +R
Sbjct: 434 IVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREG 493
Query: 149 GCKPNICTFNALIK---------------MYGDRGMFAEM---------GKVFKEIKACQ 184
PN+ +NA ++ M+ +G F ++ G +E+ +
Sbjct: 494 NLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPME 553
Query: 185 CSP------------------------------------DIVTWNTLLAVFGQNGLDSEV 208
P D+ NT L+++ G S
Sbjct: 554 DDPWSSSPYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLA 613
Query: 209 SGVFKEMKRAGFVP-ERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLA 267
+F+ G T+N+++S++ + G F AR V +M E D++TYN ++
Sbjct: 614 CKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQ 673
Query: 268 ALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITT 327
L + G + + VL + + V Y++L++A ++ L + + S I
Sbjct: 674 GLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINP 733
Query: 328 HAVLLKTLVLVNSKFDFLAEA 348
V T++ VNSK L EA
Sbjct: 734 DVVSYNTMIEVNSKAGKLKEA 754
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 149/344 (43%), Gaps = 41/344 (11%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
++ +M+++G + DL T ++L+ ++ +L + I+ L P+++ +NA V
Sbjct: 451 LVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNA--GVEA 508
Query: 61 KSRRPKEAMEVLKQMESRGFPP--SIVTYTSLISAYVRDGLLEEALELKN---------- 108
+RP+ + M FP S + S++ + EE +++
Sbjct: 509 SLKRPQSKDKDYTPM----FPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYMD 564
Query: 109 QMVEKHIKP-------------------DVYTYTTLLSGFVNAKKDELAMRVFEEMRTAG 149
Q+ + +P DV T LS +++ LA ++FE G
Sbjct: 565 QLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMG 624
Query: 150 CKPNIC-TFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEV 208
T+N+++ + +G F V ++ C+ DI T+N ++ G+ G
Sbjct: 625 VTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLA 684
Query: 209 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAA 268
S V + + G + +NTLI+A + D+A ++ M G+ PD+ +YN ++
Sbjct: 685 SAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEV 744
Query: 269 LARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEK 312
++ G +++ K L M + C PN VT + L + GKE EK
Sbjct: 745 NSKAGKLKEAYKYLKAMLDAGCLPNHVTDTILDYL---GKEMEK 785
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 110/447 (24%), Positives = 179/447 (40%), Gaps = 64/447 (14%)
Query: 22 SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRG-- 79
+ CR G L E +L +K G+ D LLD +S + + A+ VL ME G
Sbjct: 101 TVCRTG-LLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDC 159
Query: 80 FPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIK---------------PDVYTYTT 124
PS+ Y S++ A V+ L AL + +++E P
Sbjct: 160 LNPSV--YDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNE 217
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAG-CKPNICTFNALIKMYGDRGMFAEMGKVFKEIK-- 181
LL G A RVFE+++ K + ++N I +G G +FKE+K
Sbjct: 218 LLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKER 277
Query: 182 ----ACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 237
PDI T+N+L+ V G + V+ E+K +G P+ T+ LI +
Sbjct: 278 SSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKS 337
Query: 238 GSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTY 297
D A +Y M G PD YN +L +G K +VT
Sbjct: 338 YRMDDAMRIYGEMQYNGFVPDTIVYNCLL--------------------DGTLKARKVTE 377
Query: 298 SSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHA-FLEFK 356
+ L FEKM +E T+ +L+ L N + AEA F + K
Sbjct: 378 ACQL--------FEKM---VQEGVRASCWTYNILIDGL-FRNGR----AEAGFTLFCDLK 421
Query: 357 KRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFR 416
K+G D T + + R+ + K+++ M GF++ L +SL+ + +
Sbjct: 422 KKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWD 481
Query: 417 KSEMILREILEKGIEPDLISYNIVIYA 443
E +++ I E + P+++ +N + A
Sbjct: 482 WKEKLMKHIREGNLVPNVLRWNAGVEA 508
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 132/321 (41%), Gaps = 31/321 (9%)
Query: 201 QNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLS 260
+ GL EV + MK G ++ L+ + R G F+ A V M E G + S
Sbjct: 104 RTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPS 163
Query: 261 TYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEI 320
Y++VL AL + + +L + LL A N + + +
Sbjct: 164 VYDSVLIALVKKHELRLALSILFK---------------LLEASDNHSDDDTGRVIIVSY 208
Query: 321 YSGKITTHAVLLK-TLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITT--------LNAML 371
G + + +L+ + S+F + E FK ++I L+A L
Sbjct: 209 LPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAAL 268
Query: 372 SLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIE 431
SL+ K K +Y S F + YNSL+++ + + ++ E+ G E
Sbjct: 269 SLF-------KEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHE 321
Query: 432 PDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGV 491
PD +Y I+I C++ +M +A RI EM+ VPD + YN + EA +
Sbjct: 322 PDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQL 381
Query: 492 VQCMIKQGCKPDQNTYNSIVD 512
+ M+++G + TYN ++D
Sbjct: 382 FEKMVQEGVRASCWTYNILID 402
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMV--TYNALLDVYGKSRRPKEAME 70
D+ NT +S + A +LFE G+ D+ TYN+++ + K + A
Sbjct: 593 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGV-TDLTSYTYNSMMSSFVKKGYFQTARG 651
Query: 71 VLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFV 130
VL QM I TY +I + G + A + +++ ++ D+ Y TL++
Sbjct: 652 VLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALG 711
Query: 131 NAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIV 190
A + + A ++F+ M++ G P++ ++N +I++ G E K K + C P+ V
Sbjct: 712 KATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHV 771
Query: 191 TWNTLLAVFGQNGLDSEVSGVFKEMKRAGF 220
T +T+L G KEM++A F
Sbjct: 772 T-DTILDYLG------------KEMEKARF 788
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 105/549 (19%), Positives = 200/549 (36%), Gaps = 104/549 (18%)
Query: 12 PDLC------TFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG--KSR 63
P LC + + +S SL ++ + E + L LR + + + LD + S
Sbjct: 25 PQLCNVLLVASLSKTLSQSGTRSLDANSIPISEPVVLQILRRNSIDPSKKLDFFRWCYSL 84
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
RP G+ S Y+ + R GLL E +L M E + D
Sbjct: 85 RP-------------GYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAK 131
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
LL + + K E A+ V + M G N ++++
Sbjct: 132 ILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSV----------------------- 168
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
L+A+ ++ L +S +FK ++ + + +T +I +Y
Sbjct: 169 -----------LIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSY--------- 208
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMEN-GRCKPNEVTYSSLLH 302
P N +L L R + + ++V +++ R K + +Y+ +H
Sbjct: 209 ------------LPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIH 256
Query: 303 AYANGKEFEKMNALAEEI----------YSGKITTHAVLLKTLVLVNSKFDFLAEAEHAF 352
+ + + +L +E+ + I T+ L+ L L D L +
Sbjct: 257 GFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALI----VW 312
Query: 353 LEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRT 412
E K G D +T ++ + + +I M +GF YN L+ +
Sbjct: 313 DELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKA 372
Query: 413 RNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTY 472
R ++ + +++++G+ +YNI+I RNG+ + ++K D +T+
Sbjct: 373 RKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITF 432
Query: 473 NTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV---------DWYCKL--HLRE 521
+ A+ +V+ M +G D T +S++ DW KL H+RE
Sbjct: 433 SIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIRE 492
Query: 522 EAYNFVHNL 530
N V N+
Sbjct: 493 G--NLVPNV 499
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 187/373 (50%), Gaps = 13/373 (3%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
MK G++ L ++ S C+ +L L + I+L G+ PD++TYN L+ Y +
Sbjct: 6 MKFPGISTKLLNI-SVNSLCKFRNLERAETLLIDGIRL-GVLPDVITYNTLIKGYTRFIG 63
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
EA V ++M G P + TY SLIS ++ +L L+L ++M+ + PD+++Y T
Sbjct: 64 IDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNT 123
Query: 125 LLSGFVNAKKDELAMRVF-EEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
L+S + + A ++ E++ AG P I T+N L+ G ++FK +K+
Sbjct: 124 LMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKS- 182
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
+ P+++T+N L+ ++ V + +E+K++G+ P T+ T++ Y + ++
Sbjct: 183 RVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKG 242
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM-ENGRCKPNEVTYSSLLH 302
++ +M + G T D AV++AL + G E++ + + E+ +G + V+Y++LL+
Sbjct: 243 LQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLN 302
Query: 303 AYANGKEFEKMNALAEEIYSGKIT----THAVLLKTLVLVNSKFDFLAEAEHAFLEFKKR 358
Y + ++ L EEI + TH +++ L+ + + AE +
Sbjct: 303 LYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNT----GGAEKHLACIGEM 358
Query: 359 GIPHDITTLNAML 371
G+ + T N ++
Sbjct: 359 GMQPSVVTCNCLI 371
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 162/335 (48%), Gaps = 42/335 (12%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M+ G+ PD+ T+N+LIS + L+LF+E+ +GL PDM +YN L+ Y K R
Sbjct: 74 MREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGR 133
Query: 65 PKEAMEVLKQ-MESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
EA ++L + + G P I TY L+ A + G + A+EL + + +KP++ TY
Sbjct: 134 HGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPELMTYN 192
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYG-----DRGM--------- 169
L++G +++ + E++ +G PN T+ ++KMY ++G+
Sbjct: 193 ILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKE 252
Query: 170 ------FAEMGKVFKEIK------ACQC----------SPDIVTWNTLLAVFGQNGLDSE 207
FA V IK A +C S DIV++NTLL ++ ++G
Sbjct: 253 GYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDA 312
Query: 208 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLA 267
V + +E++ G P+ T +++ G+ A + E G+ P + T N ++
Sbjct: 313 VDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLID 372
Query: 268 ALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
L + G +++ ++ + ME +E TY+S++H
Sbjct: 373 GLCKAGHVDRAMRLFASME----VRDEFTYTSVVH 403
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 150/338 (44%), Gaps = 40/338 (11%)
Query: 217 RAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWE 276
R G +P+ T+NTLI Y+R D+A AV +RM EAG+ PD++TYN++++ A+ +
Sbjct: 41 RLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLN 100
Query: 277 QSEKVLSEMENGRCKPNEVTYSSLLHAYAN-GKEFEKMNALAEEIYSGK----ITTHAVL 331
+ ++ EM + P+ +Y++L+ Y G+ E L E+I+ I T+ +L
Sbjct: 101 RVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNIL 160
Query: 332 LKTL----------------------------VLVNS--KFDFLAEAEHAFLEFKKRGIP 361
L L +L+N K + + E KK G
Sbjct: 161 LDALCKSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYT 220
Query: 362 HDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEM- 420
+ T ML +Y + K + K ++ M + G+T G+ + + + + R E
Sbjct: 221 PNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFD--GFANCAVVSALIKTGRAEEAY 278
Query: 421 -ILREILEKGIEP-DLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVAT 478
+ E++ G D++SYN ++ Y ++G + +L E++ PD T+ V
Sbjct: 279 ECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNG 338
Query: 479 YAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
G A + C+ + G +P T N ++D CK
Sbjct: 339 LLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCK 376
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 413 RNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTY 472
RN ++E +L + + G+ PD+I+YN +I Y R + EA + M++ PDV TY
Sbjct: 27 RNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTY 86
Query: 473 NTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSS 532
N+ ++ A N M + + M+ G PD +YN+++ Y KL EA+ +H
Sbjct: 87 NSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHE--- 143
Query: 533 LDLHVS 538
D+H++
Sbjct: 144 -DIHLA 148
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 90/184 (48%), Gaps = 4/184 (2%)
Query: 336 VLVNS--KFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYES 393
+ VNS KF L AE ++ + G+ D+ T N ++ Y R + + + + M E+
Sbjct: 18 ISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREA 77
Query: 394 GFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEA 453
G + YNSL+ ++ + + E+L G+ PD+ SYN ++ Y + G+ EA
Sbjct: 78 GIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEA 137
Query: 454 KRILNE-MKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
+IL+E + VP + TYN + + AI + + +K KP+ TYN +++
Sbjct: 138 FKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFK-HLKSRVKPELMTYNILIN 196
Query: 513 WYCK 516
CK
Sbjct: 197 GLCK 200
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 126/305 (41%), Gaps = 37/305 (12%)
Query: 227 FNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEME 286
N +++ + + ++A + + GV PD+ TYN ++ R +++ V M
Sbjct: 16 LNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMR 75
Query: 287 NGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLA 346
+P+ TY+SL+ A +++N
Sbjct: 76 EAGIEPDVTTYNSLISGAAKN----------------------------LMLNRVLQLFD 107
Query: 347 EAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKIL-KFMYESGFTLSLPGYNSL 405
E H+ G+ D+ + N ++S Y + + KIL + ++ +G + YN L
Sbjct: 108 EMLHS-------GLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNIL 160
Query: 406 MYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAP 465
+ ++ + + + + L+ ++P+L++YNI+I C++ ++ ++ E+K
Sbjct: 161 LDALCKSGHTDNAIELFKH-LKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGY 219
Query: 466 VPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYN 525
P+ VTY T + Y + + + M K+G D ++V K EEAY
Sbjct: 220 TPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYE 279
Query: 526 FVHNL 530
+H L
Sbjct: 280 CMHEL 284
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 402 YNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMK 461
YN+L+ ++R ++ + R + E GIEPD+ +YN +I +N + ++ +EM
Sbjct: 51 YNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEML 110
Query: 462 DPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIK-QGCKPDQNTYNSIVDWYCKLHLR 520
PD+ +YNT ++ Y GEA ++ I G P +TYN ++D CK
Sbjct: 111 HSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHT 170
Query: 521 EEAYNFVHNLSS 532
+ A +L S
Sbjct: 171 DNAIELFKHLKS 182
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 142/322 (44%), Gaps = 36/322 (11%)
Query: 31 EEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSL 90
E+ +++ + G+ P+ T+N L +V+ +E + L++ME GF P +VTY +L
Sbjct: 218 EDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTL 277
Query: 91 ISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
+S+Y R G L+EA L M + + PD+ TYT+L+ G + A + F M G
Sbjct: 278 VSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGI 337
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
KP+ ++N LI Y GM + K+ E+ PD T ++ F + G
Sbjct: 338 KPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVN 397
Query: 211 VFKEMKR------------------------------------AGFVPERETFNTLISAY 234
E++R G + ET+N LI +
Sbjct: 398 FVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESL 457
Query: 235 SRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNE 294
SRC + ++A + ++ D TY A++ L R G ++E +++EM + KP+
Sbjct: 458 SRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDS 517
Query: 295 VTYSSLLHAYANGKEFEKMNAL 316
+L++ Y +F+K L
Sbjct: 518 FICGALVYGYCKELDFDKAERL 539
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/511 (23%), Positives = 217/511 (42%), Gaps = 53/511 (10%)
Query: 25 RAGSLYEEALELFEEIKL-AGLRPDMVTYNALLDVYGKSRRPKEAMEVL--------KQM 75
R S A+ F+ +K G RP++ Y LL + S++ AM+ L K+
Sbjct: 88 RFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKE 147
Query: 76 ESRGFPPSI----------VTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTL 125
E F + V + L+ Y++ GL+EE + ++++ V T L
Sbjct: 148 EVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHL 207
Query: 126 LSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQC 185
L+G + E +V+ M G PN TFN L ++ + F E+ ++++
Sbjct: 208 LNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGF 267
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
PD+VT+NTL++ + + G E ++K M R VP+ T+ +LI + G +A
Sbjct: 268 EPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQ 327
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA 305
+ RM++ G+ PD +YN ++ A + G+ +QS+K+L EM P+ T ++ +
Sbjct: 328 TFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGF- 386
Query: 306 NGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDIT 365
+ G++ S +F+ E L K IP ++
Sbjct: 387 --------------VREGRLL-------------SAVNFVVE-----LRRLKVDIPFEVC 414
Query: 366 TLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREI 425
++SL K A + + + + E G YN+L+ SR ++ ++ ++
Sbjct: 415 DF-LIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKL 473
Query: 426 LEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMF 485
+ D +Y +I CR G+ EA+ ++ EM D PD V Y F
Sbjct: 474 KNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDF 533
Query: 486 GEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
+A ++ + D +YNS+V C+
Sbjct: 534 DKAERLLSLFAMEFRIFDPESYNSLVKAVCE 564
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 115/258 (44%), Gaps = 18/258 (6%)
Query: 291 KPNEVTYSSLLHAYANGKEFE----------KMNALAEEIYSGKITTHA--------VLL 332
+PN Y LLH + K+F ++ + EE+ ++ A V+
Sbjct: 110 RPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDPVVF 169
Query: 333 KTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYE 392
LV K + E F E G + T N +L+ + L+ ++ M
Sbjct: 170 DMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCR 229
Query: 393 SGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTE 452
G + +N L + NFR+ + L ++ E+G EPDL++YN ++ +YCR G++ E
Sbjct: 230 VGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKE 289
Query: 453 AKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
A + M VPD+VTY + + + EA M+ +G KPD +YN+++
Sbjct: 290 AFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIY 349
Query: 513 WYCKLHLREEAYNFVHNL 530
YCK + +++ +H +
Sbjct: 350 AYCKEGMMQQSKKLLHEM 367
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/434 (21%), Positives = 180/434 (41%), Gaps = 8/434 (1%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVL 72
D F+ L+ L EE +F E+ +G +VT N LL+ K ++ +V
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 73 KQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNA 132
M G P+ T+ L + + D E + +M E+ +PD+ TY TL+S +
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 133 KKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTW 192
+ + A +++ M P++ T+ +LIK G E + F + PD +++
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 193 NTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLE 252
NTL+ + + G+ + + EM VP+R T ++ + R G A +
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRR 404
Query: 253 AGVTPDLSTYNAVLAALARGGLWEQSEKVLS---EMENGRCKPNEVTYSSLLHAYANGKE 309
V + ++ +L + G ++ +L E E KP TY++L+ + +
Sbjct: 405 LKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPE--TYNNLIESLSRCDA 462
Query: 310 FEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNA 369
E+ L ++ + A + L+ + EAE E + D A
Sbjct: 463 IEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGA 522
Query: 370 MLSLYGRKKLVAKTNKILKFMYESGFTLSLP-GYNSLMYLHSRTRNFRKSEMILREILEK 428
++ Y ++ K ++L ++ F + P YNSL+ T K + L+E +++
Sbjct: 523 LVYGYCKELDFDKAERLLS-LFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQR 581
Query: 429 -GIEPDLISYNIVI 441
G P+ ++ +I
Sbjct: 582 LGFVPNRLTCKYLI 595
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 87/182 (47%)
Query: 359 GIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKS 418
GI + T N + +++ + + L+ M E GF L YN+L+ + R +++
Sbjct: 231 GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEA 290
Query: 419 EMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVAT 478
+ + + + + PDL++Y +I C++G++ EA + + M D PD ++YNT +
Sbjct: 291 FYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYA 350
Query: 479 YAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVS 538
Y M ++ ++ M+ PD+ T IV+ + + A NFV L L + +
Sbjct: 351 YCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIP 410
Query: 539 EE 540
E
Sbjct: 411 FE 412
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 105/467 (22%), Positives = 208/467 (44%), Gaps = 10/467 (2%)
Query: 83 SIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVF 142
++ + T L++ + G EA + + E +P + +YTTLL+ K+ +
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIV 103
Query: 143 EEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQN 202
E+ +G K + FNA+I + + G + + ++K +P T+NTL+ +G
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIA 163
Query: 203 GLDSEVSGVFKEMKRAGFV---PERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDL 259
G S + M G V P TFN L+ A+ + ++A V K+M E GV PD
Sbjct: 164 GKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDT 223
Query: 260 STYNAVLAALARGG--LWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALA 317
TYN + + G + +SE V + + KPN T ++ Y
Sbjct: 224 VTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFV 283
Query: 318 EEIYSGKITTHAVLLKTLVLVNSKFDFLAE--AEHAFLEFKKRGIPHDITTLNAMLSLYG 375
+ ++ + V+ +L+ N + + + K+ + D+ T + +++ +
Sbjct: 284 RRMKEMRVEANLVVFNSLI--NGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWS 341
Query: 376 RKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLI 435
+ K ++ K M ++G Y+ L + R + +K+E +L ++ + P+++
Sbjct: 342 SAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVV 400
Query: 436 SYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCM 495
+ VI +C NG M +A R+ N+M P++ T+ T + Y +A V+Q M
Sbjct: 401 IFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMM 460
Query: 496 IKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEK 542
G KP+ +T+ + + + L +E+ ++ L D+ +++ EK
Sbjct: 461 RGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKCKDIEIAKLEK 507
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 175/391 (44%), Gaps = 6/391 (1%)
Query: 9 GLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEA 68
G P L ++ TL++ Y + E++ +G + D + +NA+++ + +S ++A
Sbjct: 75 GHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDA 134
Query: 69 MEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEK---HIKPDVYTYTTL 125
++ L +M+ G P+ TY +LI Y G E + EL + M+E+ + P++ T+ L
Sbjct: 135 VQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVL 194
Query: 126 LSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRG--MFAEMGKVFKEIKAC 183
+ + KK E A V ++M G +P+ T+N + Y +G + AE V K +
Sbjct: 195 VQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKE 254
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
+ P+ T ++ + + G + + MK FN+LI+ + D
Sbjct: 255 KAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGI 314
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
V M E V D+ TY+ V+ A + G E++ +V EM KP+ YS L
Sbjct: 315 DEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKG 374
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
Y KE +K L E + + + V+ T++ + +A F + K G+ +
Sbjct: 375 YVRAKEPKKAEELLETLIV-ESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPN 433
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESG 394
I T ++ Y K K ++L+ M G
Sbjct: 434 IKTFETLMWGYLEVKQPWKAEEVLQMMRGCG 464
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 202/437 (46%), Gaps = 10/437 (2%)
Query: 32 EALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLI 91
EA +F+ + G RP +++Y LL ++ ++ ++E G + + ++I
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 92 SAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAG-- 149
+A+ G +E+A++ +M E + P TY TL+ G+ A K E + + + M G
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 150 -CKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNG--LDS 206
PNI TFN L++ + + E +V K+++ C PD VT+NT+ + Q G + +
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA 242
Query: 207 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVL 266
E V K + + P T ++ Y R G +RM E V +L +N+++
Sbjct: 243 ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLI 302
Query: 267 AALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSG--K 324
+ ++VL+ M+ K + +TYS++++A+++ EK + +E+ K
Sbjct: 303 NGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVK 362
Query: 325 ITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTN 384
HA + V +K AE L + R ++ ++S + +
Sbjct: 363 PDAHAYSILAKGYVRAKEPKKAEELLETLIVESR---PNVVIFTTVISGWCSNGSMDDAM 419
Query: 385 KILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAY 444
++ M + G + ++ + +LM+ + + K+E +L+ + G++P+ ++ ++ A+
Sbjct: 420 RVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAW 479
Query: 445 CRNGKMTEAKRILNEMK 461
G E+ + +N +K
Sbjct: 480 RVAGLTDESNKAINALK 496
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 158/317 (49%), Gaps = 15/317 (4%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
++ +++ G D FN +I+ E+A++ ++K GL P TYN L+ YG
Sbjct: 102 IVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYG 161
Query: 61 KSRRPKEAMEVLKQMESRG---FPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKP 117
+ +P+ + E+L M G P+I T+ L+ A+ + +EEA E+ +M E ++P
Sbjct: 162 IAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRP 221
Query: 118 DVYTYTTLLSGFVNAKKDELA-MRVFEEM-RTAGCKPNICTFNALIKMYGDRGMFAEMGK 175
D TY T+ + +V + A V E+M KPN T ++ Y G + +
Sbjct: 222 DTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLR 281
Query: 176 VFKEIKACQCSPDIVTWNTLL----AVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLI 231
+ +K + ++V +N+L+ V ++G+D V MK + T++T++
Sbjct: 282 FVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDE----VLTLMKECNVKADVITYSTVM 337
Query: 232 SAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCK 291
+A+S G ++A V+K M++AGV PD Y+ + R +++E++L E +
Sbjct: 338 NAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELL-ETLIVESR 396
Query: 292 PNEVTYSSLLHAY-ANG 307
PN V +++++ + +NG
Sbjct: 397 PNVVIFTTVISGWCSNG 413
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 105/183 (57%), Gaps = 5/183 (2%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L MK + D+ T++T+++ + E+A ++F+E+ AG++PD Y+ L Y
Sbjct: 317 VLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYV 376
Query: 61 KSRRPKEAMEVLKQM--ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPD 118
+++ PK+A E+L+ + ESR P++V +T++IS + +G +++A+ + N+M + + P+
Sbjct: 377 RAKEPKKAEELLETLIVESR---PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPN 433
Query: 119 VYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFK 178
+ T+ TL+ G++ K+ A V + MR G KP TF L + + G+ E K
Sbjct: 434 IKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAIN 493
Query: 179 EIK 181
+K
Sbjct: 494 ALK 496
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 110/492 (22%), Positives = 229/492 (46%), Gaps = 65/492 (13%)
Query: 48 DMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELK 107
D+ +N + Y ++ R EA+ V K+M S V+Y +IS Y+R+G E A +L
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPR----WSSVSYNGMISGYLRNGEFELARKLF 118
Query: 108 NQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDR 167
++M E+ D+ ++ ++ G+V + A +FE M + ++C++N ++ Y
Sbjct: 119 DEMPER----DLVSWNVMIKGYVRNRNLGKARELFEIMP----ERDVCSWNTMLSGYAQN 170
Query: 168 GMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKR---------- 217
G + VF + + V+WN LL+ + QN E +FK +
Sbjct: 171 GCVDDARSVFDRMP----EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLL 226
Query: 218 AGFVPERE-----------------TFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLS 260
GFV +++ ++NT+I+ Y++ G D+AR ++ + D+
Sbjct: 227 GGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF----DESPVQDVF 282
Query: 261 TYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEI 320
T+ A+++ + + E++ ++ +M + NEV+++++L Y G+ E +A+E+
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERME----MAKEL 334
Query: 321 YSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLV 380
+ + T++ ++ ++EA++ F + KR D + AM++ Y +
Sbjct: 335 FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHS 390
Query: 381 AKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIV 440
+ ++ M G L+ ++S + + + + +++ G E N +
Sbjct: 391 FEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNAL 450
Query: 441 IYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGE-AIGVVQCMIKQG 499
+ YC+ G + EA + EM D+V++NT +A Y+ + FGE A+ + M ++G
Sbjct: 451 LLMYCKCGSIEEANDLFKEMAGK----DIVSWNTMIAGYSRHG-FGEVALRFFESMKREG 505
Query: 500 CKPDQNTYNSIV 511
KPD T +++
Sbjct: 506 LKPDDATMVAVL 517
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 154/346 (44%), Gaps = 55/346 (15%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVL 72
D+ T+ ++S + EEA ELF+++ + V++NA+L Y + R + A E+
Sbjct: 280 DVFTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELF 335
Query: 73 KQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNA 132
M R ++ T+ ++I+ Y + G + EA L ++M K D ++ +++G+ +
Sbjct: 336 DVMPCR----NVSTWNTMITGYAQCGKISEAKNLFDKMP----KRDPVSWAAMIAGYSQS 387
Query: 133 KKDELAMRVFEEMRTAGCKPNICTF----------------------------------- 157
A+R+F +M G + N +F
Sbjct: 388 GHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVG 447
Query: 158 NALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKR 217
NAL+ MY G E +FKE+ DIV+WNT++A + ++G F+ MKR
Sbjct: 448 NALLLMYCKCGSIEEANDLFKEMAG----KDIVSWNTMIAGYSRHGFGEVALRFFESMKR 503
Query: 218 AGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEA-GVTPDLSTYNAVLAALARGGLWE 276
G P+ T ++SA S G D+ R + M + GV P+ Y ++ L R GL E
Sbjct: 504 EGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLE 563
Query: 277 QSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYS 322
+ + M+N +P+ + +LL A E A++I++
Sbjct: 564 DAHNL---MKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFA 606
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/471 (21%), Positives = 210/471 (44%), Gaps = 44/471 (9%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVL 72
D+C++NT++S ++A +F+ + + V++NALL Y ++ + +EA +
Sbjct: 156 DVCSWNTMLSGYAQNGCVDDARSVFDRMP----EKNDVSWNALLSAYVQNSKMEEACMLF 211
Query: 73 KQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNA 132
K E+ ++V++ L+ +V+ + EA + + M + DV ++ T+++G+ +
Sbjct: 212 KSREN----WALVSWNCLLGGFVKKKKIVEARQFFDSMNVR----DVVSWNTIITGYAQS 263
Query: 133 KKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTW 192
K + A ++F+E ++ T+ A++ Y M E ++F ++ + V+W
Sbjct: 264 GKIDEARQLFDESPV----QDVFTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSW 315
Query: 193 NTLLAVFGQNGLDSEVSGVFKEMKRAGF--VPER--ETFNTLISAYSRCGSFDQARAVYK 248
N +LA + V G EM + F +P R T+NT+I+ Y++CG +A+ ++
Sbjct: 316 NAMLAGY--------VQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFD 367
Query: 249 RMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGK 308
+M + D ++ A++A ++ G ++ ++ +ME + N ++SS L A+
Sbjct: 368 KMPKR----DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVV 423
Query: 309 EFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLN 368
E L + G T + L+L+ K + EA F E + DI + N
Sbjct: 424 ALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK----DIVSWN 479
Query: 369 AMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEK 428
M++ Y R + + M G +++ S T K + +
Sbjct: 480 TMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQD 539
Query: 429 -GIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVAT 478
G+ P+ Y ++ R G + +A N MK+ PD + T +
Sbjct: 540 YGVMPNSQHYACMVDLLGRAGLLEDAH---NLMKNMPFEPDAAIWGTLLGA 587
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 109/257 (42%), Gaps = 11/257 (4%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ + M+ +G + +F++ +S C E +L + G NALL +Y
Sbjct: 396 LFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYC 455
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K +EA ++ K+M + IV++ ++I+ Y R G E AL M + +KPD
Sbjct: 456 KCGSIEEANDLFKEMAGK----DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDA 511
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEM-RTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
T +LS + + + F M + G PN + ++ + G G+ + + K
Sbjct: 512 TMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKN 571
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISA-YSRCG 238
+ PD W TLL +G ++E++ + K PE L+S Y+ G
Sbjct: 572 MPF---EPDAAIWGTLLGASRVHG-NTELAETAAD-KIFAMEPENSGMYVLLSNLYASSG 626
Query: 239 SFDQARAVYKRMLEAGV 255
+ + RM + GV
Sbjct: 627 RWGDVGKLRVRMRDKGV 643
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 153/325 (47%), Gaps = 2/325 (0%)
Query: 6 KSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRP 65
+S G+ P++ T N L+ + E A ++ +EI GL P++VTY +L Y
Sbjct: 183 ESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDM 242
Query: 66 KEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTL 125
+ A VL++M RG+ P TYT L+ Y + G EA + + M + I+P+ TY +
Sbjct: 243 ESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVM 302
Query: 126 LSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQC 185
+ KK A +F+EM P+ +I + E +++++ C
Sbjct: 303 IRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNC 362
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
PD +TL+ + G +E +F E ++ G +P T+NTLI+ G +A
Sbjct: 363 MPDNALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELTEAGR 421
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA 305
++ M E P+ TYN ++ L++ G ++ +VL EM C PN+ T+ L
Sbjct: 422 LWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQ 481
Query: 306 N-GKEFEKMNALAEEIYSGKITTHA 329
GKE + M ++ + +GK+ +
Sbjct: 482 KLGKEEDAMKIVSMAVMNGKVDKES 506
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/479 (23%), Positives = 213/479 (44%), Gaps = 48/479 (10%)
Query: 79 GFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKH--IKPDVYTYTTLLSGFVNAKKDE 136
GF + TY S++ R + L + + IK + LL + A + E
Sbjct: 78 GFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYE 137
Query: 137 LAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK-ACQCSPDIVTWNTL 195
+MR+F + G K ++ + N L+ + F + +FK K + +P+I T N L
Sbjct: 138 SSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLL 197
Query: 196 L-AVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAG 254
+ A+ +N ++S V E+ G VP T+ T++ Y G + A+ V + ML+ G
Sbjct: 198 VKALCKKNDIESAYK-VLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRG 256
Query: 255 VTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMN 314
PD +TY ++ + G + ++ V+ +ME +PNEVTY ++ A K+ +
Sbjct: 257 WYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEAR 316
Query: 315 ALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLE---FKKRGIPHDITTLNAML 371
+ +E+ + L ++ D L E +H E ++ + ++ NA+L
Sbjct: 317 NMFDEMLERSFMPDSSLCCKVI------DALCE-DHKVDEACGLWRKMLKNNCMPDNALL 369
Query: 372 SLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIE 431
S ++ ++ + G R RK L + EKG
Sbjct: 370 S------------TLIHWLCKEG----------------RVTEARK----LFDEFEKGSI 397
Query: 432 PDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGV 491
P L++YN +I C G++TEA R+ ++M + P+ TYN + + N E + V
Sbjct: 398 PSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRV 457
Query: 492 VQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEKGRLLERIA 550
++ M++ GC P++ T+ + + KL E+A V +++ ++ V +E L++ A
Sbjct: 458 LEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIV-SMAVMNGKVDKESWELFLKKFA 515
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 152/329 (46%), Gaps = 5/329 (1%)
Query: 12 PDLCTFNTLISCCRAGSL---YEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEA 68
P C N I R L YE ++ +F I G++ + + N LL+V +++R
Sbjct: 115 PIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLV 174
Query: 69 MEVLKQ-MESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLS 127
+ K ES G P+I T L+ A + +E A ++ +++ + P++ TYTT+L
Sbjct: 175 HAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILG 234
Query: 128 GFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSP 187
G+V E A RV EEM G P+ T+ L+ Y G F+E V +++ + P
Sbjct: 235 GYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEP 294
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVY 247
+ VT+ ++ + E +F EM F+P+ +I A D+A ++
Sbjct: 295 NEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLW 354
Query: 248 KRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG 307
++ML+ PD + + ++ L + G ++ K+ E E G P+ +TY++L+
Sbjct: 355 RKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEK 413
Query: 308 KEFEKMNALAEEIYSGKITTHAVLLKTLV 336
E + L +++Y K +A L+
Sbjct: 414 GELTEAGRLWDDMYERKCKPNAFTYNVLI 442
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 132/283 (46%), Gaps = 1/283 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L ++ S GL P+L T+ T++ A E A + EE+ G PD TY L+D Y
Sbjct: 213 VLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYC 272
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K R EA V+ ME P+ VTY +I A ++ EA + ++M+E+ PD
Sbjct: 273 KLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSS 332
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
++ K + A ++ +M C P+ + LI G E K+F E
Sbjct: 333 LCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF 392
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ P ++T+NTL+A + G +E ++ +M P T+N LI S+ G+
Sbjct: 393 EKGSI-PSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNV 451
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLS 283
+ V + MLE G P+ +T+ + L + G E + K++S
Sbjct: 452 KEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVS 494
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 140/311 (45%), Gaps = 13/311 (4%)
Query: 222 PERETFNTLISAYSRCGSFDQARAV--YKRMLEAGVTPDLSTYNAVLAALARGGLWEQSE 279
P+R L+S ++ + D A + Y G T + TY+++L L+R ++ E
Sbjct: 44 PQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVE 103
Query: 280 KVLSEMENG--RCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVL 337
+++++ N K E + LL Y +E + I + L TL+
Sbjct: 104 SLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLN 163
Query: 338 V---NSKFDFLAEAEHAFLEFKKR--GIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYE 392
V N +FD + HA + K GI +I T N ++ +K + K+L +
Sbjct: 164 VLIQNQRFDLV----HAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPS 219
Query: 393 SGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTE 452
G +L Y +++ + + ++ +L E+L++G PD +Y +++ YC+ G+ +E
Sbjct: 220 MGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSE 279
Query: 453 AKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
A ++++M+ P+ VTY + GEA + M+++ PD + ++D
Sbjct: 280 AATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVID 339
Query: 513 WYCKLHLREEA 523
C+ H +EA
Sbjct: 340 ALCEDHKVDEA 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 89/184 (48%), Gaps = 1/184 (0%)
Query: 370 MLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEK- 428
+L YG + +I + + G S+ N+L+ + + + F + + E
Sbjct: 126 LLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESF 185
Query: 429 GIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEA 488
GI P++ + N+++ A C+ + A ++L+E+ VP++VTY T + Y A A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 489 IGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEKGRLLER 548
V++ M+ +G PD TY ++D YCKL EA + ++ ++ +E G ++
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 549 IAEK 552
+ ++
Sbjct: 306 LCKE 309
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Query: 2 LMDMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
L D +G P L T+NTLI+ C G L EA L++++ +P+ TYN L++
Sbjct: 388 LFDEFEKGSIPSLLTYNTLIAGMCEKGEL-TEAGRLWDDMYERKCKPNAFTYNVLIEGLS 446
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMV 111
K+ KE + VL++M G P+ T+ L + G E+A+++ + V
Sbjct: 447 KNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAV 497
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 151/299 (50%), Gaps = 3/299 (1%)
Query: 8 QGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKE 67
Q + P+L F L+ + + ++A+E+ +E+ G PD + LLD K K+
Sbjct: 179 QLIEPEL--FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKD 236
Query: 68 AMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLS 127
A ++ + M R FP ++ +TSL+ + R G + EA + QM E +PD+ YT LLS
Sbjct: 237 AAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLS 295
Query: 128 GFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSP 187
G+ NA K A + +MR G +PN + LI+ E KVF E++ +C
Sbjct: 296 GYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEA 355
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVY 247
D+VT+ L++ F + G + V +M + G +P T+ ++ A+ + SF++ +
Sbjct: 356 DVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELM 415
Query: 248 KRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYAN 306
++M + PD+ YN V+ + G +++ ++ +EME P T+ +++ A+
Sbjct: 416 EKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLAS 474
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 175/363 (48%), Gaps = 19/363 (5%)
Query: 20 LISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRG 79
L CR G + E A + ++ AG PD+V Y LL Y + + +A ++L+ M RG
Sbjct: 259 LYGWCRVGKMME-AKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRG 317
Query: 80 FPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAM 139
F P+ YT LI A + +EEA+++ +M + DV TYT L+SGF K +
Sbjct: 318 FEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCY 377
Query: 140 RVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVF 199
V ++M G P+ T+ ++ + + F E ++ ++++ + PDI +N ++ +
Sbjct: 378 IVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLA 437
Query: 200 GQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGV--TP 257
+ G E ++ EM+ G P +TF +I+ + G +A +K M+ G+
Sbjct: 438 CKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVS 497
Query: 258 DLSTYNAVLAALARGGLWEQSEKVLSEM-ENGRCKPNEVTYSSLLHA-YANGKEFEKMNA 315
T +L + + E ++ V S + G C+ N ++++ +HA ++ G E E +
Sbjct: 498 QYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSY 557
Query: 316 LAEEI---YSGKITTHAVLLKTL-VLVNSKF---------DFLAEAEHAFLEFKKRGIPH 362
E I + + T A L+K L L N +F + AE E +F +K+RG+
Sbjct: 558 CIEMIEMDFMPQPDTFAKLMKGLKKLYNREFAGEITEKVRNMAAEREMSFKMYKRRGV-Q 616
Query: 363 DIT 365
D+T
Sbjct: 617 DLT 619
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 159/359 (44%), Gaps = 10/359 (2%)
Query: 148 AGCKPNIC----TFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVT---WNTLLAVFG 200
A +P C + +++K+ F + + +E++ + +P ++ + L+ F
Sbjct: 137 AAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMR--KENPQLIEPELFVVLVQRFA 194
Query: 201 QNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLS 260
+ + V EM + GF P+ F L+ A + GS A +++ M +L
Sbjct: 195 SADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLR 253
Query: 261 TYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEI 320
+ ++L R G +++ VL +M +P+ V Y++LL YAN + L ++
Sbjct: 254 YFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDM 313
Query: 321 YSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLV 380
+A L+ K D + EA F+E ++ D+ T A++S + + +
Sbjct: 314 RRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKI 373
Query: 381 AKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIV 440
K +L M + G S Y +M H + +F + ++ ++ + PD+ YN+V
Sbjct: 374 DKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVV 433
Query: 441 IYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQG 499
I C+ G++ EA R+ NEM++ P V T+ + A+ EA + M+ +G
Sbjct: 434 IRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRG 492
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 135/336 (40%), Gaps = 37/336 (11%)
Query: 189 IVTWNTLLAVFGQNGLDSEVSGVFKEMKRAG-FVPERETFNTLISAYSRCGSFDQARAVY 247
I + +++ + + V G+ +EM++ + E E F L+ ++ +A V
Sbjct: 147 IEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVL 206
Query: 248 KRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG 307
M + G PD + +L AL + G + + K+ +M R N ++SLL+ +
Sbjct: 207 DEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRM-RFPVNLRYFTSLLYGWCR- 264
Query: 308 KEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTL 367
GK + EA++ ++ + G DI
Sbjct: 265 --------------VGK--------------------MMEAKYVLVQMNEAGFEPDIVDY 290
Query: 368 NAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILE 427
+LS Y +A +L+ M GF + Y L+ + ++ + E+
Sbjct: 291 TNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMER 350
Query: 428 KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGE 487
E D+++Y ++ +C+ GK+ + +L++M +P +TY + + F E
Sbjct: 351 YECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEE 410
Query: 488 AIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEA 523
+ +++ M + PD YN ++ CKL +EA
Sbjct: 411 CLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEA 446
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 134/310 (43%), Gaps = 14/310 (4%)
Query: 235 SRCGSFDQARAVYKRMLEAGVTP----DLSTYNAVLAALAR----GGLWEQSEKVLSEME 286
+RCG D Y+ + A P + Y +++ L++ G +W E++ E
Sbjct: 121 NRCG--DAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEM--RKE 176
Query: 287 NGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLA 346
N + E+ + L+ +A+ +K + +E+ + L+ K +
Sbjct: 177 NPQLIEPEL-FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVK 235
Query: 347 EAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLM 406
+A F + + R P ++ ++L + R + + +L M E+GF + Y +L+
Sbjct: 236 DAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLL 294
Query: 407 YLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPV 466
++ + +LR++ +G EP+ Y ++I A C+ +M EA ++ EM+
Sbjct: 295 SGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECE 354
Query: 467 PDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNF 526
DVVTY V+ + + V+ MIK+G P + TY I+ + K EE
Sbjct: 355 ADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLEL 414
Query: 527 VHNLSSLDLH 536
+ + ++ H
Sbjct: 415 MEKMRQIEYH 424
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 108/253 (42%), Gaps = 7/253 (2%)
Query: 290 CKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKF---DFLA 346
C EV Y S++ + ++F + L EE+ K + + V++ +F D +
Sbjct: 144 CHSIEV-YKSMVKILSKMRQFGAVWGLIEEMR--KENPQLIEPELFVVLVQRFASADMVK 200
Query: 347 EAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLM 406
+A E K G D +L + V K+ + M F ++L + SL+
Sbjct: 201 KAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLL 259
Query: 407 YLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPV 466
Y R +++ +L ++ E G EPD++ Y ++ Y GKM +A +L +M+
Sbjct: 260 YGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFE 319
Query: 467 PDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNF 526
P+ Y + EA+ V M + C+ D TY ++V +CK ++ Y
Sbjct: 320 PNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIV 379
Query: 527 VHNLSSLDLHVSE 539
+ ++ L SE
Sbjct: 380 LDDMIKKGLMPSE 392
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 119/216 (55%), Gaps = 2/216 (0%)
Query: 5 MKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M G +PD+ T+N L+ + R G + + LF+E+ G PD TYN LL + GK
Sbjct: 245 MLEDGFSPDVLTYNILLWTNYRLGKM-DRFDRLFDEMARDGFSPDSYTYNILLHILGKGN 303
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+P A+ L M+ G PS++ YT+LI R G LE ++MV+ +PDV YT
Sbjct: 304 KPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYT 363
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
+++G+V + + + A +F EM G PN+ T+N++I+ G F E + KE+++
Sbjct: 364 VMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESR 423
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAG 219
C+P+ V ++TL++ + G SE V +EM + G
Sbjct: 424 GCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 123/282 (43%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M G TFN LI C L ++A+ F + K RP +YNA+L+ +
Sbjct: 174 EMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVK 233
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ K V KQM GF P ++TY L+ R G ++ L ++M PD YTY
Sbjct: 234 QYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYN 293
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
LL K A+ M+ G P++ + LI G E+
Sbjct: 294 ILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKA 353
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
C PD+V + ++ + +G + +F+EM G +P T+N++I G F +A
Sbjct: 354 GCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREA 413
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM 285
+ K M G P+ Y+ +++ L + G ++ KV+ EM
Sbjct: 414 CWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREM 455
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 141/315 (44%)
Query: 45 LRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEAL 104
R + +Y+ L+ ++ + K ++ +M GFP + T+ LI + GL ++A+
Sbjct: 145 FRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAV 204
Query: 105 ELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMY 164
+ + +P ++Y +L+ + K+ +L V+++M G P++ T+N L+
Sbjct: 205 VQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTN 264
Query: 165 GDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPER 224
G ++F E+ SPD T+N LL + G+ MK G P
Sbjct: 265 YRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSV 324
Query: 225 ETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSE 284
+ TLI SR G+ + + M++AG PD+ Y ++ G ++++++ E
Sbjct: 325 LHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFRE 384
Query: 285 MENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDF 344
M PN TY+S++ EF + L +E+ S + V+ TLV K
Sbjct: 385 MTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGK 444
Query: 345 LAEAEHAFLEFKKRG 359
L+EA E K+G
Sbjct: 445 LSEARKVIREMVKKG 459
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 142/294 (48%), Gaps = 12/294 (4%)
Query: 226 TFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM 285
+++ L+ ++ CG + + M++ G T+N ++ + GL +Q+ +
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKS 210
Query: 286 ENGRCKPNEVTYSSLLHAYANGKEFEKM----NALAEEIYSGKITTHAVLLKTLVLVNSK 341
+ +P + +Y+++L++ K+++ + + E+ +S + T+ +LL T N +
Sbjct: 211 KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWT----NYR 266
Query: 342 FDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGR--KKLVAKTNKILKFMYESGFTLSL 399
+ + F E + G D T N +L + G+ K L A T L M E G S+
Sbjct: 267 LGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTT--LNHMKEVGIDPSV 324
Query: 400 PGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNE 459
Y +L+ SR N + L E+++ G PD++ Y ++I Y +G++ +AK + E
Sbjct: 325 LHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFRE 384
Query: 460 MKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDW 513
M +P+V TYN+ + F EA +++ M +GC P+ Y+++V +
Sbjct: 385 MTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSY 438
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 133/295 (45%), Gaps = 1/295 (0%)
Query: 30 YEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTS 89
Y+ L +E+ G T+N L+ G++ K+A+ + ++ + P +Y +
Sbjct: 165 YKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNA 224
Query: 90 LISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAG 149
++++ + + + QM+E PDV TY LL K + R+F+EM G
Sbjct: 225 ILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDG 284
Query: 150 CKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVS 209
P+ T+N L+ + G +K P ++ + TL+ + G
Sbjct: 285 FSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACK 344
Query: 210 GVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAAL 269
EM +AG P+ + +I+ Y G D+A+ +++ M G P++ TYN+++ L
Sbjct: 345 YFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGL 404
Query: 270 ARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL-HAYANGKEFEKMNALAEEIYSG 323
G + ++ +L EME+ C PN V YS+L+ + GK E + E + G
Sbjct: 405 CMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 144/346 (41%), Gaps = 43/346 (12%)
Query: 119 VYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFK 178
V +Y L+ F + + R+ +EM G TFN LI
Sbjct: 149 VNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLI----------------- 191
Query: 179 EIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 238
C C G+ GL + F + K + P + ++N ++++
Sbjct: 192 ----CSC--------------GEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVK 233
Query: 239 SFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYS 298
+ VYK+MLE G +PD+ TYN +L R G ++ +++ EM P+ TY+
Sbjct: 234 QYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYN 293
Query: 299 SLLHAYANGKE----FEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLE 354
LLH G + +N + E + + L+ L S+ L ++ E
Sbjct: 294 ILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGL----SRAGNLEACKYFLDE 349
Query: 355 FKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRN 414
K G D+ M++ Y + K ++ + M G ++ YNS++
Sbjct: 350 MVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGE 409
Query: 415 FRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEM 460
FR++ +L+E+ +G P+ + Y+ ++ + GK++EA++++ EM
Sbjct: 410 FREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREM 455
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 137/313 (43%), Gaps = 8/313 (2%)
Query: 191 TWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRM 250
+++ L+ +F + G + + EM + GF TFN LI + G QA + +
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKS 210
Query: 251 LEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA-YANGK- 308
P +YNA+L +L ++ E V +M P+ +TY+ LL Y GK
Sbjct: 211 KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKM 270
Query: 309 -EFEKM-NALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITT 366
F+++ + +A + +S T+ +LL L N L H K+ GI +
Sbjct: 271 DRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNH----MKEVGIDPSVLH 326
Query: 367 LNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREIL 426
++ R + L M ++G + Y ++ + + K++ + RE+
Sbjct: 327 YTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMT 386
Query: 427 EKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFG 486
KG P++ +YN +I C G+ EA +L EM+ P+ V Y+T V+
Sbjct: 387 VKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLS 446
Query: 487 EAIGVVQCMIKQG 499
EA V++ M+K+G
Sbjct: 447 EARKVIREMVKKG 459
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 4/150 (2%)
Query: 2 LMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELF-EEIKLAGLRPDMVTYNALLDVY 59
L MK G+ P + + TLI RAG+L EA + F +E+ AG RPD+V Y ++ Y
Sbjct: 312 LNHMKEVGIDPSVLHYTTLIDGLSRAGNL--EACKYFLDEMVKAGCRPDVVCYTVMITGY 369
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
S +A E+ ++M +G P++ TY S+I G EA L +M + P+
Sbjct: 370 VVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNF 429
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAG 149
Y+TL+S A K A +V EM G
Sbjct: 430 VVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 148/297 (49%), Gaps = 16/297 (5%)
Query: 6 KSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRP 65
+ +GL PD TF T+++ C ++ E+ ++ G+ ++V ++LLD+YGK
Sbjct: 257 RGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSV 316
Query: 66 KEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTL 125
+EA +V M + + V++++L+ Y ++G E+A+E+ +M EK D+Y + T+
Sbjct: 317 REARQVFNGMSKK----NSVSWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTV 368
Query: 126 LSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQC 185
L L + + GC N+ +ALI +YG G +V+ ++
Sbjct: 369 LKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSI--- 425
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
+++TWN +L+ QNG E F +M + G P+ +F +++A G D+ R
Sbjct: 426 -RNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRN 484
Query: 246 VYKRMLEA-GVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL 301
+ M ++ G+ P Y+ ++ L R GL+E++E +L E C+ + + LL
Sbjct: 485 YFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLL---ERAECRNDASLWGVLL 538
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 108/513 (21%), Positives = 212/513 (41%), Gaps = 56/513 (10%)
Query: 17 FNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQME 76
+ +L+ C + ++ + +GL D N+LL +Y K M +++
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFK---LGPGMRETRRVF 120
Query: 77 SRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDE 136
F +++TS++S YV +ALE+ +MV + + +T ++ + +
Sbjct: 121 DGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVR 180
Query: 137 LAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLL 196
L + T G + N + L +YG + +VF E+ PD++ W +L
Sbjct: 181 LGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMP----EPDVICWTAVL 236
Query: 197 AVFGQNGLDSEVSGVFKEMKRA-GFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGV 255
+ F +N L E G+F M R G VP+ TF T+++A Q + ++ +++ G+
Sbjct: 237 SAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGI 296
Query: 256 TPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNA 315
++ +++L + G ++ +V NG K N V++S+LL Y E EK
Sbjct: 297 GSNVVVESSLLDMYGKCGSVREARQVF----NGMSKKNSVSWSALLGGYCQNGEHEKAIE 352
Query: 316 LAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYG 375
+ E+ + +LK + + L + H ++ +RG ++ +A++ LYG
Sbjct: 353 IFREMEEKDLYCFGTVLKACAGLAAV--RLGKEIHG--QYVRRGCFGNVIVESALIDLYG 408
Query: 376 RKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLI 435
+ + +++ S+M +R ++I
Sbjct: 409 KSGCIDSASRVY------------------------------SKMSIR---------NMI 429
Query: 436 SYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCM 495
++N ++ A +NG+ EA N+M PD +++ + M E M
Sbjct: 430 TWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLM 489
Query: 496 IKQ-GCKPDQNTYNSIVDWYCKLHLREEAYNFV 527
K G KP Y+ ++D + L EEA N +
Sbjct: 490 AKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLL 522
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 127/285 (44%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
++ +M G CTFN LI C L + +E F + K RP +YNA+L
Sbjct: 174 LIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLL 233
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
++ K V +QM GF P ++TY ++ A R G + L ++MV+ PD+Y
Sbjct: 234 GVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLY 293
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY LL K A+ + MR G +P + F LI G E
Sbjct: 294 TYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDET 353
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
C+PD+V + ++ + G + +FKEM G +P T+N++I + G F
Sbjct: 354 VKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKF 413
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM 285
+A A+ K M G P+ Y+ ++ L G ++ +V+ +M
Sbjct: 414 KEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDM 458
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 108/216 (50%), Gaps = 2/216 (0%)
Query: 5 MKSQGLAPDLCTFN-TLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M G PD+ T+N + + R G + L +E+ G PD+ TYN LL
Sbjct: 248 MLEDGFTPDVLTYNIVMFANFRLGKT-DRLYRLLDEMVKDGFSPDLYTYNILLHHLATGN 306
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+P A+ +L M G P ++ +T+LI R G LE ++ V+ PDV YT
Sbjct: 307 KPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYT 366
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
+++G+++ + E A +F+EM G PN+ T+N++I+ + G F E + KE+++
Sbjct: 367 VMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESR 426
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAG 219
C+P+ V ++TL+ G E V K+M G
Sbjct: 427 GCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 127/285 (44%)
Query: 52 YNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMV 111
Y+ L+ ++ + K ++ +M G+P + T+ LI GL + +E +
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSK 214
Query: 112 EKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFA 171
+ +P ++Y +L + K+ +L V+E+M G P++ T+N ++ G
Sbjct: 215 TFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTD 274
Query: 172 EMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLI 231
+ ++ E+ SPD+ T+N LL + M+ G P F TLI
Sbjct: 275 RLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLI 334
Query: 232 SAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCK 291
SR G + + ++ G TPD+ Y ++ GG E++E++ EM
Sbjct: 335 DGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQL 394
Query: 292 PNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLV 336
PN TY+S++ + +F++ AL +E+ S + V+ TLV
Sbjct: 395 PNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLV 439
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 152/355 (42%), Gaps = 43/355 (12%)
Query: 146 RTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLD 205
TA C ++ L+K++ + G + M ++ E+ T+N L+ G+ GL
Sbjct: 150 HTANC------YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLA 203
Query: 206 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAV 265
+V F + K + P + ++N ++ + + VY++MLE G TPD+ TYN V
Sbjct: 204 RDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIV 263
Query: 266 LAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG-KEFEKMNALAEEIYSGK 324
+ A R G ++ ++L EM P+ TY+ LLH A G K +N L G
Sbjct: 264 MFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVG- 322
Query: 325 ITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTN 384
+ + TL+ S+ L ++ E K G D+ M++
Sbjct: 323 VEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMIT------------ 370
Query: 385 KILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAY 444
Y SG L K+E + +E+ EKG P++ +YN +I +
Sbjct: 371 -----GYISGGEL------------------EKAEEMFKEMTEKGQLPNVFTYNSMIRGF 407
Query: 445 CRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQG 499
C GK EA +L EM+ P+ V Y+T V EA VV+ M+++G
Sbjct: 408 CMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 129/288 (44%), Gaps = 4/288 (1%)
Query: 227 FNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEME 286
++ L+ ++ CG + + M++ G T+N ++ GL + + +
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSK 214
Query: 287 NGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLA 346
+P + +Y+++LH+ K+++ ++ + E++ T + ++ N +
Sbjct: 215 TFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTD 274
Query: 347 EAEHAFLEFKKRGIPHDITTLNAMLS--LYGRKKLVAKTNKILKFMYESGFTLSLPGYNS 404
E K G D+ T N +L G K L A +L M E G + + +
Sbjct: 275 RLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALN--LLNHMREVGVEPGVIHFTT 332
Query: 405 LMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPA 464
L+ SR + + E ++ G PD++ Y ++I Y G++ +A+ + EM +
Sbjct: 333 LIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKG 392
Query: 465 PVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
+P+V TYN+ + + F EA +++ M +GC P+ Y+++V+
Sbjct: 393 QLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVN 440
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 139/339 (41%), Gaps = 35/339 (10%)
Query: 122 YTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK 181
Y L+ F + + R+ +EM G CTFN LI G+ G+ ++ + F + K
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSK 214
Query: 182 ACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFD 241
P ++N +L + V+++M GF P+ T+N ++ A R G D
Sbjct: 215 TFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTD 274
Query: 242 QARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL 301
+ + M++ G +PDL TYN +L LA G + +L+ M +P + +++L+
Sbjct: 275 RLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLI 334
Query: 302 HAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIP 361
+ + E +E K G
Sbjct: 335 DGLSRAGKLEACKYFMDETV-----------------------------------KVGCT 359
Query: 362 HDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMI 421
D+ M++ Y + K ++ K M E G ++ YNS++ F+++ +
Sbjct: 360 PDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACAL 419
Query: 422 LREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEM 460
L+E+ +G P+ + Y+ ++ GK+ EA ++ +M
Sbjct: 420 LKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDM 458
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 1 MLMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELF-EEIKLAGLRPDMVTYNALLDV 58
+L M+ G+ P + F TLI RAG L EA + F +E G PD+V Y ++
Sbjct: 314 LLNHMREVGVEPGVIHFTTLIDGLSRAGKL--EACKYFMDETVKVGCTPDVVCYTVMITG 371
Query: 59 YGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPD 118
Y ++A E+ K+M +G P++ TY S+I + G +EA L +M + P+
Sbjct: 372 YISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPN 431
Query: 119 VYTYTTLLSGFVNAKKDELAMRVFEEMRTAG 149
Y+TL++ NA K A V ++M G
Sbjct: 432 FVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 175/416 (42%), Gaps = 45/416 (10%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M +GL + + ++ C + EALE F+E + + D V YN D K R
Sbjct: 344 MLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGR 403
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+EA E+L++M+ RG P ++ YT+LI Y G + +AL+L ++M+ + PD+ TY
Sbjct: 404 VEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNV 463
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALI-------KMYGDRGMFAEMGKVF 177
L+SG +E + ++E M+ G KPN T + +I K+ F+ + +
Sbjct: 464 LVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKC 523
Query: 178 KEIKA------CQCSPDIVTWNTLLAV---------------FGQNGLDSEVSGVFKEMK 216
E KA C+ + + + G + V K+M
Sbjct: 524 PENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMS 583
Query: 217 RAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWE 276
P R +I A+ + + +A+ ++ M+E G+ PDL TY ++ R +
Sbjct: 584 AYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQ 643
Query: 277 QSEKVLSEMENGRCKPNEVTYSSLLHAYAN---------------GKEFEKMNALAEEIY 321
++E + +M+ KP+ VTY+ LL Y GK K + + E
Sbjct: 644 KAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGK--RKASEVLREFS 701
Query: 322 SGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRK 377
+ I V L+ K + L +A F G+ D+ ++S Y RK
Sbjct: 702 AAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRK 757
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 111/499 (22%), Positives = 204/499 (40%), Gaps = 58/499 (11%)
Query: 39 EIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDG 98
E++ G D+ A++D Y K+ EA+ L +M +G + V + ++ Y +
Sbjct: 308 EMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMD 367
Query: 99 LLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFN 158
+ EALE + + +I D Y + E A + +EM+ G P++ +
Sbjct: 368 MCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYT 427
Query: 159 ALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRA 218
LI Y +G + + E+ SPD++T+N L++ +NG + EV +++ MK
Sbjct: 428 TLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAE 487
Query: 219 GFVPERETFNTLISAYSRCGSFDQARAVYKRM---------------LEAGVTPDL---- 259
G P T + +I +A + + EAG++
Sbjct: 488 GPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAF 547
Query: 260 ---------STYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA---NG 307
S Y + +L G E++ VL +M R +P ++ A+ N
Sbjct: 548 VRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNV 607
Query: 308 KEFEKM-NALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITT 366
+E + + + + E + T+ +++ T +N L +AE F + K+RGI D+ T
Sbjct: 608 REAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNE----LQKAESLFEDMKQRGIKPDVVT 663
Query: 367 LNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREIL 426
+L Y LK E T S+ G RK+ +LRE
Sbjct: 664 YTVLLDRY------------LKLDPEHHETCSVQG----------EVGKRKASEVLREFS 701
Query: 427 EKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFG 486
GI D++ Y ++I C+ + +A + + M D PD+V Y T +++Y
Sbjct: 702 AAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYID 761
Query: 487 EAIGVVQCMIKQGCKPDQN 505
A+ +V + K+ P ++
Sbjct: 762 MAVTLVTELSKKYNIPSES 780
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 127/541 (23%), Positives = 235/541 (43%), Gaps = 41/541 (7%)
Query: 5 MKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+K GL + T+ ++ + CR G+L E A+ L E + G + T+ L V G++
Sbjct: 207 LKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENESVFGYK----TFINGLCVTGETE 262
Query: 64 RPKEAMEVLKQMESRGFPPSI---VTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ A+ ++ ++ R + ++ + + ++ A + +M E DVY
Sbjct: 263 K---AVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVY 319
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
++ + A+ ++M G K N + +++ Y M E + FKE
Sbjct: 320 ACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEF 379
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ D V +N + G E + +EMK G VP+ + TLI Y G
Sbjct: 380 RDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKV 439
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
A + M+ G++PDL TYN +++ LAR G E+ ++ M+ KPN VT S +
Sbjct: 440 VDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVI 499
Query: 301 LHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAF--LEFKKR 358
+ ++ ++ AE+ +S + V + +A AF LE+ R
Sbjct: 500 IEGLCFARKVKE----AEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLR 555
Query: 359 GIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYN---SLMYLHSRTRNF 415
+ + + Y + K + +LK M S + + PG + ++ + N
Sbjct: 556 KSVYIKLFFSLCIEGY-----LEKAHDVLKKM--SAYRVE-PGRSMCGKMIGAFCKLNNV 607
Query: 416 RKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTF 475
R+++++ ++E+G+ PDL +Y I+I+ YCR ++ +A+ + +MK PDVVTY
Sbjct: 608 REAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVL 667
Query: 476 VATY--------AANSMFGE-----AIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREE 522
+ Y S+ GE A V++ G D Y ++D CK++ E+
Sbjct: 668 LDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQ 727
Query: 523 A 523
A
Sbjct: 728 A 728
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 118/501 (23%), Positives = 199/501 (39%), Gaps = 86/501 (17%)
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
P A+ L+Q++ G P++ Y +L+ GL ++L + +VE IK + +T
Sbjct: 70 PNLALSFLRQLKEHGVSPNVNAYATLVRILTTWGL---DIKLDSVLVE-LIKNEERGFTV 125
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
+ V ++ E R F +R +G AL+K Y GMF E V + K
Sbjct: 126 MDLIEVIGEQAEEKKRSFVLIRVSG---------ALVKAYVSLGMFDEATDVLFQSKRLD 176
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
C DI N L+ + G + +FK++K+ G T+ ++ A R G+ ++A
Sbjct: 177 CVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAA 236
Query: 245 AV---------YKRML---------EAGVTPDLSTYN----------AVLAALARGGLWE 276
+ YK + E V L + AVL + RG E
Sbjct: 237 MLLIENESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNE 296
Query: 277 Q----SEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLL 332
+E V+ EME + +++ Y + +++ + + V++
Sbjct: 297 MKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIV 356
Query: 333 KTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAM---LSLYGRKKLVAKTNKILKF 389
++ K D EA F EF+ I D N LS GR
Sbjct: 357 SLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGR------------- 403
Query: 390 MYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGK 449
E F L L+E+ ++GI PD+I+Y +I YC GK
Sbjct: 404 -VEEAFEL------------------------LQEMKDRGIVPDVINYTTLIDGYCLQGK 438
Query: 450 MTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNS 509
+ +A +++EM PD++TYN V+ A N E + + + M +G KP+ T +
Sbjct: 439 VVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSV 498
Query: 510 IVDWYCKLHLREEAYNFVHNL 530
I++ C +EA +F +L
Sbjct: 499 IIEGLCFARKVKEAEDFFSSL 519
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 152/353 (43%), Gaps = 43/353 (12%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
++ +M G++PDL T+N L+S EE LE++E +K G +P+ VT + +++
Sbjct: 445 LIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLC 504
Query: 61 KSRRPKEAMEVLKQMESRG----------------------------FPPSIVTYTSLIS 92
+R+ KEA + +E + +P Y L
Sbjct: 505 FARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFF 564
Query: 93 AYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKP 152
+ +G LE+A ++ +M ++P ++ F A +F+ M G P
Sbjct: 565 SLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIP 624
Query: 153 NICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLL--------------AV 198
++ T+ +I Y + +F+++K PD+VT+ LL +V
Sbjct: 625 DLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSV 684
Query: 199 FGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPD 258
G+ G + S V +E AG + + LI + + +QA ++ RM+++G+ PD
Sbjct: 685 QGEVG-KRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPD 743
Query: 259 LSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE 311
+ Y ++++ R G + + +++E+ P+E +++ A K F+
Sbjct: 744 MVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSESFEAAVKSAALKAKRFQ 796
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 104/227 (45%), Gaps = 13/227 (5%)
Query: 66 KEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTL 125
++A +VLK+M + P +I A+ + + EA L + MVE+ + PD++TYT +
Sbjct: 573 EKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIM 632
Query: 126 LSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDR--------GMFAEMGK-- 175
+ + + + A +FE+M+ G KP++ T+ L+ Y + E+GK
Sbjct: 633 IHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRK 692
Query: 176 ---VFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLIS 232
V +E A D+V + L+ + + + +F M +G P+ + TLIS
Sbjct: 693 ASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLIS 752
Query: 233 AYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSE 279
+Y R G D A + + + P S AV +A + ++ E
Sbjct: 753 SYFRKGYIDMAVTLVTELSKKYNIPSESFEAAVKSAALKAKRFQYGE 799
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 101/518 (19%), Positives = 190/518 (36%), Gaps = 72/518 (13%)
Query: 33 ALELFEEIKLAGLRPDMVTYNAL---LDVYGKSRRPKEAMEVLKQMESRGFPPS------ 83
AL ++K G+ P++ Y L L +G + + L + E RGF
Sbjct: 73 ALSFLRQLKEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNEERGFTVMDLIEVI 132
Query: 84 -------------IVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFV 130
I +L+ AYV G+ +EA ++ Q D+ L++
Sbjct: 133 GEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMT 192
Query: 131 NAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIV 190
K + M +F++++ G N T+ ++K +G E + E +
Sbjct: 193 EFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENE--------- 243
Query: 191 TWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRM 250
+VFG + T I+ G ++A A+ +
Sbjct: 244 ------SVFG--------------------------YKTFINGLCVTGETEKAVALILEL 271
Query: 251 LEAGVTPDLSTYNAVLAALARGGLWEQ----SEKVLSEMENGRCKPNEVTYSSLLHAYAN 306
++ AVL + RG E +E V+ EME + +++ Y
Sbjct: 272 IDRKYLAG-DDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCK 330
Query: 307 GKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITT 366
+ +++ + + V++ ++ K D EA F EF+ I D
Sbjct: 331 NMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVC 390
Query: 367 LNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREIL 426
N + V + ++L+ M + G + Y +L+ + + ++ E++
Sbjct: 391 YNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI 450
Query: 427 EKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFG 486
G+ PDLI+YN+++ RNG E I MK P P+ VT + +
Sbjct: 451 GNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVK 510
Query: 487 EAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAY 524
EA + +Q C ++ ++ V YC+ L ++AY
Sbjct: 511 EAEDFFSSL-EQKCPENKASF---VKGYCEAGLSKKAY 544
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 149/280 (53%), Gaps = 3/280 (1%)
Query: 1 MLMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGL-RPDMVTYNALLDV 58
+L M G PD+ T+NTLI C++ L +A E+F+++K + PD+VTY +++
Sbjct: 228 LLGVMSGFGCEPDIVTYNTLIQGFCKSNEL-NKASEMFKDVKSGSVCSPDVVTYTSMISG 286
Query: 59 YGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPD 118
Y K+ + +EA +L M G P+ VT+ L+ Y + G + A E++ +M+ PD
Sbjct: 287 YCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPD 346
Query: 119 VYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFK 178
V T+T+L+ G+ + R++EEM G PN T++ LI + + ++
Sbjct: 347 VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLG 406
Query: 179 EIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 238
++ + P +N ++ F + G +E + + +EM++ P++ TF LI + G
Sbjct: 407 QLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKG 466
Query: 239 SFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQS 278
+A +++ +M+ G +PD T +++L+ L + G+ +++
Sbjct: 467 RMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 169/359 (47%), Gaps = 7/359 (1%)
Query: 16 TFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQ 74
T+N L S C+AG L++ A ++FE +K G+ P+ L+ + + + A +L Q
Sbjct: 105 TYNLLTRSLCKAG-LHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ 163
Query: 75 -MESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAK 133
E G + SL++ V+ +E+A++L ++ + D T+ L+ G
Sbjct: 164 SFEVEG---CCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 134 KDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ-CSPDIVTW 192
K E A+ + M GC+P+I T+N LI+ + + ++FK++K+ CSPD+VT+
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 193 NTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLE 252
++++ + + G E S + +M R G P TFN L+ Y++ G A + +M+
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS 340
Query: 253 AGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEK 312
G PD+ T+ +++ R G Q ++ EM PN TYS L++A N K
Sbjct: 341 FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLK 400
Query: 313 MNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAML 371
L ++ S I + ++ K + EA E +K+ D T ++
Sbjct: 401 ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 158/321 (49%), Gaps = 10/321 (3%)
Query: 17 FNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQME 76
NTL+ R E+A++LF+E D T+N L+ + ++A+E+L M
Sbjct: 178 LNTLVKLDRV----EDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 77 SRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHI-KPDVYTYTTLLSGFVNAKKD 135
G P IVTY +LI + + L +A E+ + + PDV TYT+++SG+ A K
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 136 ELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTL 195
A + ++M G P TFN L+ Y G ++ ++ + C PD+VT+ +L
Sbjct: 294 REASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSL 353
Query: 196 LAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGV 255
+ + + G S+ +++EM G P T++ LI+A +AR + ++ +
Sbjct: 354 IDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDI 413
Query: 256 TPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA-NGKEFEKMN 314
P YN V+ + G ++ ++ EME +CKP+++T++ L+ + G+ FE ++
Sbjct: 414 IPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVS 473
Query: 315 ALAEEIYSG----KITTHAVL 331
+ + G KIT ++L
Sbjct: 474 IFHKMVAIGCSPDKITVSSLL 494
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 185/418 (44%), Gaps = 11/418 (2%)
Query: 114 HIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMF--- 170
+I+ +TY L A +LA ++FE M++ G PN L+ + ++G
Sbjct: 98 NIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFA 157
Query: 171 -AEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNT 229
A + + F E++ C + N+LL + + +F E R + +TFN
Sbjct: 158 TALLLQSF-EVEGC-----CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNI 211
Query: 230 LISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGR 289
LI G ++A + M G PD+ TYN ++ + ++ ++ ++++G
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271
Query: 290 -CKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEA 348
C P+ VTY+S++ Y + + ++L +++ I V LV +K + A
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA 331
Query: 349 EHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYL 408
E + G D+ T +++ Y R V++ ++ + M G + Y+ L+
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA 391
Query: 409 HSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPD 468
K+ +L ++ K I P YN VI +C+ GK+ EA I+ EM+ PD
Sbjct: 392 LCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD 451
Query: 469 VVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNF 526
+T+ + + EA+ + M+ GC PD+ T +S++ K + +EAY+
Sbjct: 452 KITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 151/319 (47%), Gaps = 6/319 (1%)
Query: 13 DLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV 71
D TFN LI C G E+ALEL + G PD+VTYN L+ + KS +A E+
Sbjct: 205 DTKTFNILIRGLCGVGK-AEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEM 263
Query: 72 LKQMESRGF-PPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFV 130
K ++S P +VTYTS+IS Y + G + EA L + M+ I P T+ L+ G+
Sbjct: 264 FKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYA 323
Query: 131 NAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIV 190
A + A + +M + GC P++ TF +LI Y G ++ ++++E+ A P+
Sbjct: 324 KAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAF 383
Query: 191 TWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRM 250
T++ L+ + + ++ +P+ +N +I + + G ++A + + M
Sbjct: 384 TYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Query: 251 LEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY---ANG 307
+ PD T+ ++ G ++ + +M C P+++T SSLL
Sbjct: 444 EKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMA 503
Query: 308 KEFEKMNALAEEIYSGKIT 326
KE +N +A + S +
Sbjct: 504 KEAYHLNQIARKGQSNNVV 522
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 142/321 (44%), Gaps = 23/321 (7%)
Query: 226 TFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA-RGGLWEQSEKVLSE 284
T+N L + + G D A +++ M GV+P+ ++++ A +G L + +L
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 285 MENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIY----SGKITTHAVLLKTLVLVNS 340
E C + +SLL+ E L +E T +L++ L V
Sbjct: 165 FEVEGCC---MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGV-- 219
Query: 341 KFDFLAEAEHAFLEF----KKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFT 396
+AE A LE G DI T N ++ + + + K +++ K + +SG
Sbjct: 220 -----GKAEKA-LELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV-KSGSV 272
Query: 397 LS--LPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAK 454
S + Y S++ + + R++ +L ++L GI P +++N+++ Y + G+M A+
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 455 RILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWY 514
I +M PDVVT+ + + Y + + + M +G P+ TY+ +++
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 515 CKLHLREEAYNFVHNLSSLDL 535
C + +A + L+S D+
Sbjct: 393 CNENRLLKARELLGQLASKDI 413
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 433 DLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVV 492
D ++NI+I C GK +A +L M PD+VTYNT + + ++ +A +
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 493 QCMIKQG--CKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLH 536
+ +K G C PD TY S++ YCK EA + + ++ L ++
Sbjct: 265 K-DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIY 309
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 1 MLMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L + S+ + P +N +I C+AG + EA + EE++ +PD +T+ L+ +
Sbjct: 404 LLGQLASKDIIPQPFMYNPVIDGFCKAGKV-NEANVIVEEMEKKKCKPDKITFTILIIGH 462
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEK 113
R EA+ + +M + G P +T +SL+S ++ G+ +EA L NQ+ K
Sbjct: 463 CMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARK 515
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 149/280 (53%), Gaps = 3/280 (1%)
Query: 1 MLMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGL-RPDMVTYNALLDV 58
+L M G PD+ T+NTLI C++ L +A E+F+++K + PD+VTY +++
Sbjct: 228 LLGVMSGFGCEPDIVTYNTLIQGFCKSNEL-NKASEMFKDVKSGSVCSPDVVTYTSMISG 286
Query: 59 YGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPD 118
Y K+ + +EA +L M G P+ VT+ L+ Y + G + A E++ +M+ PD
Sbjct: 287 YCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPD 346
Query: 119 VYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFK 178
V T+T+L+ G+ + R++EEM G PN T++ LI + + ++
Sbjct: 347 VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLG 406
Query: 179 EIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 238
++ + P +N ++ F + G +E + + +EM++ P++ TF LI + G
Sbjct: 407 QLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKG 466
Query: 239 SFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQS 278
+A +++ +M+ G +PD T +++L+ L + G+ +++
Sbjct: 467 RMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 169/359 (47%), Gaps = 7/359 (1%)
Query: 16 TFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQ 74
T+N L S C+AG L++ A ++FE +K G+ P+ L+ + + + A +L Q
Sbjct: 105 TYNLLTRSLCKAG-LHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ 163
Query: 75 -MESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAK 133
E G + SL++ V+ +E+A++L ++ + D T+ L+ G
Sbjct: 164 SFEVEG---CCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 134 KDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ-CSPDIVTW 192
K E A+ + M GC+P+I T+N LI+ + + ++FK++K+ CSPD+VT+
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 193 NTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLE 252
++++ + + G E S + +M R G P TFN L+ Y++ G A + +M+
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS 340
Query: 253 AGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEK 312
G PD+ T+ +++ R G Q ++ EM PN TYS L++A N K
Sbjct: 341 FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLK 400
Query: 313 MNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAML 371
L ++ S I + ++ K + EA E +K+ D T ++
Sbjct: 401 ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 158/321 (49%), Gaps = 10/321 (3%)
Query: 17 FNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQME 76
NTL+ R E+A++LF+E D T+N L+ + ++A+E+L M
Sbjct: 178 LNTLVKLDRV----EDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 77 SRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHI-KPDVYTYTTLLSGFVNAKKD 135
G P IVTY +LI + + L +A E+ + + PDV TYT+++SG+ A K
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 136 ELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTL 195
A + ++M G P TFN L+ Y G ++ ++ + C PD+VT+ +L
Sbjct: 294 REASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSL 353
Query: 196 LAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGV 255
+ + + G S+ +++EM G P T++ LI+A +AR + ++ +
Sbjct: 354 IDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDI 413
Query: 256 TPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA-NGKEFEKMN 314
P YN V+ + G ++ ++ EME +CKP+++T++ L+ + G+ FE ++
Sbjct: 414 IPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVS 473
Query: 315 ALAEEIYSG----KITTHAVL 331
+ + G KIT ++L
Sbjct: 474 IFHKMVAIGCSPDKITVSSLL 494
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 185/418 (44%), Gaps = 11/418 (2%)
Query: 114 HIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMF--- 170
+I+ +TY L A +LA ++FE M++ G PN L+ + ++G
Sbjct: 98 NIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFA 157
Query: 171 -AEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNT 229
A + + F E++ C + N+LL + + +F E R + +TFN
Sbjct: 158 TALLLQSF-EVEGC-----CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNI 211
Query: 230 LISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGR 289
LI G ++A + M G PD+ TYN ++ + ++ ++ ++++G
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271
Query: 290 -CKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEA 348
C P+ VTY+S++ Y + + ++L +++ I V LV +K + A
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA 331
Query: 349 EHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYL 408
E + G D+ T +++ Y R V++ ++ + M G + Y+ L+
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA 391
Query: 409 HSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPD 468
K+ +L ++ K I P YN VI +C+ GK+ EA I+ EM+ PD
Sbjct: 392 LCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD 451
Query: 469 VVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNF 526
+T+ + + EA+ + M+ GC PD+ T +S++ K + +EAY+
Sbjct: 452 KITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 151/319 (47%), Gaps = 6/319 (1%)
Query: 13 DLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV 71
D TFN LI C G E+ALEL + G PD+VTYN L+ + KS +A E+
Sbjct: 205 DTKTFNILIRGLCGVGK-AEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEM 263
Query: 72 LKQMESRGF-PPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFV 130
K ++S P +VTYTS+IS Y + G + EA L + M+ I P T+ L+ G+
Sbjct: 264 FKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYA 323
Query: 131 NAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIV 190
A + A + +M + GC P++ TF +LI Y G ++ ++++E+ A P+
Sbjct: 324 KAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAF 383
Query: 191 TWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRM 250
T++ L+ + + ++ +P+ +N +I + + G ++A + + M
Sbjct: 384 TYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Query: 251 LEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY---ANG 307
+ PD T+ ++ G ++ + +M C P+++T SSLL
Sbjct: 444 EKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMA 503
Query: 308 KEFEKMNALAEEIYSGKIT 326
KE +N +A + S +
Sbjct: 504 KEAYHLNQIARKGQSNNVV 522
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 142/321 (44%), Gaps = 23/321 (7%)
Query: 226 TFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA-RGGLWEQSEKVLSE 284
T+N L + + G D A +++ M GV+P+ ++++ A +G L + +L
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 285 MENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIY----SGKITTHAVLLKTLVLVNS 340
E C + +SLL+ E L +E T +L++ L V
Sbjct: 165 FEVEGCC---MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGV-- 219
Query: 341 KFDFLAEAEHAFLEF----KKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFT 396
+AE A LE G DI T N ++ + + + K +++ K + +SG
Sbjct: 220 -----GKAEKA-LELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV-KSGSV 272
Query: 397 LS--LPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAK 454
S + Y S++ + + R++ +L ++L GI P +++N+++ Y + G+M A+
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 455 RILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWY 514
I +M PDVVT+ + + Y + + + M +G P+ TY+ +++
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 515 CKLHLREEAYNFVHNLSSLDL 535
C + +A + L+S D+
Sbjct: 393 CNENRLLKARELLGQLASKDI 413
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 433 DLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVV 492
D ++NI+I C GK +A +L M PD+VTYNT + + ++ +A +
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 493 QCMIKQG--CKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLH 536
+ +K G C PD TY S++ YCK EA + + ++ L ++
Sbjct: 265 K-DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIY 309
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
Query: 1 MLMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L + S+ + P +N +I C+AG + EA + EE++ +PD +T+ L+ +
Sbjct: 404 LLGQLASKDIIPQPFMYNPVIDGFCKAGKV-NEANVIVEEMEKKKCKPDKITFTILIIGH 462
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEK 113
R EA+ + +M + G P +T +SL+S ++ G+ +EA L NQ+ K
Sbjct: 463 CMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARK 515
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/512 (21%), Positives = 229/512 (44%), Gaps = 42/512 (8%)
Query: 2 LMDMKSQ-GLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLA-GLRPDMVTYNALLDVY 59
++D+ S+ G+ P L FN+++ + + A E F +A G+ D+ TY L+
Sbjct: 134 VVDLVSKFGIKPSLKVFNSILDVLVKEDI-DIAREFFTRKMMASGIHGDVYTYGILMKGL 192
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
+ R + ++L+ M++ G P+ V Y +L+ A ++G + A L ++M E P+
Sbjct: 193 SLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PND 248
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
T+ L+S + N +K +M + E+ + G P++ T ++++ + G +E +V +
Sbjct: 249 VTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLER 308
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+++ D+V NTL+ + G F EM+R G++P ET+N LI+ Y G
Sbjct: 309 VESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGM 368
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
D A + M + + +T+N ++ L+ GG + K+L M++ S
Sbjct: 369 LDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQD----------SD 418
Query: 300 LLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRG 359
+H G + N + Y A+ +FL + E F
Sbjct: 419 TVH----GARIDPYNCVIYGFYKENRWEDAL------------EFLLKMEKLF------- 455
Query: 360 IPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSE 419
P + ++SL + + + + E G S+ + L++ +S+ +S
Sbjct: 456 -PRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVP-SIIVSHCLIHRYSQHGKIEESL 513
Query: 420 MILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATY 479
++ +++ +G P ++N VI +C+ K+ + + +M + VPD +YN +
Sbjct: 514 ELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEEL 573
Query: 480 AANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
+A + M+++ PD + ++S++
Sbjct: 574 CVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM 605
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 121/514 (23%), Positives = 219/514 (42%), Gaps = 27/514 (5%)
Query: 51 TYNALLDVYGKSRRPKEAMEVLKQM-ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQ 109
TY AL RR ++L +M +S G PP + ++I + R L++ + + +
Sbjct: 78 TYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDL 137
Query: 110 MVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVF-EEMRTAGCKPNICTFNALIKMYGDRG 168
+ + IKP + + ++L V D +A F +M +G ++ T+ L+K
Sbjct: 138 VSKFGIKPSLKVFNSILDVLVKEDID-IAREFFTRKMMASGIHGDVYTYGILMKGLSLTN 196
Query: 169 MFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFN 228
+ K+ + +K +P+ V +NTLL +NG + EMK P TFN
Sbjct: 197 RIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFN 252
Query: 229 TLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENG 288
LISAY Q+ + ++ G PD+ T V+ L G ++ +VL +E+
Sbjct: 253 ILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESK 312
Query: 289 RCKPNEVTYSSLLHAY-ANGKEFEKMNALAE---EIYSGKITTHAVLLKTLVLVNSKFDF 344
K + V ++L+ Y A GK E + Y + T+ +L+ V
Sbjct: 313 GGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVG----M 368
Query: 345 LAEAEHAFLEFKKRGIPHDITTLNAM---LSLYGRKKLVAKTNKILKFMYESGFT--LSL 399
L A F + K I + T N + LS+ GR KIL+ M +S +
Sbjct: 369 LDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTD---DGLKILEMMQDSDTVHGARI 425
Query: 400 PGYNSLMY-LHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILN 458
YN ++Y + R E +L+ +EK + P + + + + C G M + K +
Sbjct: 426 DPYNCVIYGFYKENRWEDALEFLLK--MEK-LFPRAVDRSFKLISLCEKGGMDDLKTAYD 482
Query: 459 EMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLH 518
+M VP ++ + + Y+ + E++ ++ M+ +G P +T+N+++ +CK
Sbjct: 483 QMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQD 542
Query: 519 LREEAYNFVHNLSSLDLHVSEEEKGRLLERIAEK 552
FV +++ E LLE + K
Sbjct: 543 KVMNGIKFVEDMAERGCVPDTESYNPLLEELCVK 576
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 184/436 (42%), Gaps = 45/436 (10%)
Query: 1 MLMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L MK+ G+AP+ +NTL+ + C+ G + A L E+K P+ VT+N L+ Y
Sbjct: 204 LLQIMKTSGVAPNAVVYNTLLHALCKNGKV-GRARSLMSEMK----EPNDVTFNILISAY 258
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
++ ++M +L++ S GF P +VT T ++ +G + EALE+ ++ K K DV
Sbjct: 259 CNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDV 318
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TL+ G+ K +A R F EM G PN+ T+N LI Y D GM F +
Sbjct: 319 VACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFND 378
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+K D + WN TFNTLI S G
Sbjct: 379 MKT-----DAIRWNF------------------------------ATFNTLIRGLSIGGR 403
Query: 240 FDQARAVYKRMLEAGVT--PDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTY 297
D + + M ++ + YN V+ + WE + + L +ME + P V
Sbjct: 404 TDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKME--KLFPRAVDR 461
Query: 298 SSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKK 357
S L + + + +++ ++ L+ S+ + E+ +
Sbjct: 462 SFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVT 521
Query: 358 RGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRK 417
RG +T NA++ + ++ V K ++ M E G YN L+ + +K
Sbjct: 522 RGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQK 581
Query: 418 SEMILREILEKGIEPD 433
+ ++ ++EK I PD
Sbjct: 582 AWLLFSRMVEKSIVPD 597
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 146/352 (41%), Gaps = 37/352 (10%)
Query: 7 SQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRP 65
S G PD+ T ++ C G + EALE+ E ++ G + D+V N L+ Y +
Sbjct: 276 SLGFVPDVVTVTKVMEVLCNEGRV-SEALEVLERVESKGGKVDVVACNTLVKGYCALGKM 334
Query: 66 KEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTL 125
+ A +ME +G+ P++ TY LI+ Y G+L+ AL+ N M I+ + T+ TL
Sbjct: 335 RVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTL 394
Query: 126 LSGFVNAKKDELAMRVFEEMRT------AGCKPNICTF----------NALIKMYGDRGM 169
+ G + + +++ E M+ A P C +AL + +
Sbjct: 395 IRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKL 454
Query: 170 FAE-MGKVFKEIKACQCS------------------PDIVTWNTLLAVFGQNGLDSEVSG 210
F + + FK I C+ P I+ + L+ + Q+G E
Sbjct: 455 FPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLE 514
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
+ +M G++P TFN +I + + + M E G PD +YN +L L
Sbjct: 515 LINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELC 574
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYS 322
G +++ + S M P+ +SSL+ + ++L + I S
Sbjct: 575 VKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAIHVNSSLQDIIQS 626
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 124/314 (39%), Gaps = 50/314 (15%)
Query: 219 GFVPERETFNTLISAYSRCGSFDQARAVYKRMLEA-GVTPDLSTYNAVLAALARGGLWEQ 277
GF+ R T+ L FD + M ++ G+ PD + + ++ R L ++
Sbjct: 71 GFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKR 130
Query: 278 SEKVLSEMENGRCKPNEVTYSSLLHAYAN-----GKEFEKMNALAEEIYSGKITTHAVLL 332
V+ + KP+ ++S+L +EF +A I+ G + T+ +L+
Sbjct: 131 VISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIH-GDVYTYGILM 189
Query: 333 KTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYE 392
K L L N + K+L+ M
Sbjct: 190 KGLSLTNR---------------------------------------IGDGFKLLQIMKT 210
Query: 393 SGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTE 452
SG + YN+L LH+ +N + R ++ + EP+ +++NI+I AYC K+ +
Sbjct: 211 SGVAPNAVVYNTL--LHALCKNGKVGRA--RSLMSEMKEPNDVTFNILISAYCNEQKLIQ 266
Query: 453 AKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
+ +L + VPDVVT + EA+ V++ + +G K D N++V
Sbjct: 267 SMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVK 326
Query: 513 WYCKLHLREEAYNF 526
YC L A F
Sbjct: 327 GYCALGKMRVAQRF 340
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/508 (22%), Positives = 212/508 (41%), Gaps = 85/508 (16%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVL 72
+L ++N+++S ++A+ L +E+++ GL+PD+VT+N+LL Y K+A+ VL
Sbjct: 154 NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVL 213
Query: 73 KQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNA 132
K+M+ G PS + +SL+ A G L+ + ++ + DVY TTL+ ++
Sbjct: 214 KRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKT 273
Query: 133 KKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTW 192
A VF+ M + +IV W
Sbjct: 274 GYLPYARMVFDMMD---------------------------------------AKNIVAW 294
Query: 193 NTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLE 252
N+L++ L + + M++ G P+ T+N+L S Y+ G ++A V +M E
Sbjct: 295 NSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKE 354
Query: 253 AGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEK 312
GV P++ ++ A+ + ++ G + + KV +M+ PN T S+LL K
Sbjct: 355 KGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL----------K 404
Query: 313 MNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLS 372
+ ++SGK L K L+ D A++
Sbjct: 405 ILGCLSLLHSGKEVHGFCLRKNLIC-------------------------DAYVATALVD 439
Query: 373 LYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEP 432
+YG+ + +I + SL +N ++ ++ + +LE G+EP
Sbjct: 440 MYGKSGDLQSAIEIFWGIKNK----SLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEP 495
Query: 433 DLISYNIVIYAYCRN-GKMTEAKRILNEMKDP-APVPDVVTYNTFVATYAANSMFGEAIG 490
D I++ V+ + C+N G + E + + M+ +P + + V + EA
Sbjct: 496 DAITFTSVL-SVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWD 554
Query: 491 VVQCMIKQGCKPDQNTYNSIVDWYCKLH 518
+Q M KPD + + + CK+H
Sbjct: 555 FIQTM---SLKPDATIWGAFLS-SCKIH 578
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 108/520 (20%), Positives = 228/520 (43%), Gaps = 14/520 (2%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVL 72
DL ++ R+G+ +E+A+ELF E++ +G + T LL V E ++
Sbjct: 54 DLAWNEIVMVNLRSGN-WEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIH 112
Query: 73 KQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNA 132
+ G ++ SLI Y R+G LE + ++ N M ++++ ++ ++LS +
Sbjct: 113 GYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLS----SWNSILSSYTKL 168
Query: 133 KKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTW 192
+ A+ + +EM G KP+I T+N+L+ Y +G+ + V K ++ P +
Sbjct: 169 GYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSI 228
Query: 193 NTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLE 252
++LL + G + + R + TLI Y + G AR V+ M++
Sbjct: 229 SSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFD-MMD 287
Query: 253 AGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEK 312
A ++ +N++++ L+ L + +E ++ ME KP+ +T++SL YA + EK
Sbjct: 288 A---KNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEK 344
Query: 313 MNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLS 372
+ ++ + + V + SK A F++ ++ G+ + T++ +L
Sbjct: 345 ALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLK 404
Query: 373 LYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEP 432
+ G L+ ++ F +L+ ++ ++ + + + I I K
Sbjct: 405 ILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNK---- 460
Query: 433 DLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVV 492
L S+N ++ Y G+ E + M + PD +T+ + ++ + + E
Sbjct: 461 SLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYF 520
Query: 493 QCM-IKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLS 531
M + G P + +VD + +EA++F+ +S
Sbjct: 521 DLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMS 560
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 186/427 (43%), Gaps = 46/427 (10%)
Query: 103 ALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIK 162
+L N++ ++ K D + ++ + + E A+ +F EM+ +G K T L++
Sbjct: 38 SLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQ 97
Query: 163 MYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVP 222
+ ++ FAE ++ + ++ N+L+ ++ +NG VF MK
Sbjct: 98 VCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNL-- 155
Query: 223 ERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVL 282
++N+++S+Y++ G D A + M G+ PD+ T+N++L+ A GL + + VL
Sbjct: 156 --SSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVL 213
Query: 283 SEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKF 342
M+ KP+ + SSLL A A + A+ I ++ + TL+ + K
Sbjct: 214 KRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKT 273
Query: 343 DFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGY 402
+L A F + K +VA +
Sbjct: 274 GYLPYARMVF-------------------DMMDAKNIVA--------------------W 294
Query: 403 NSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKD 462
NSL+ S + +E ++ + ++GI+PD I++N + Y GK +A ++ +MK+
Sbjct: 295 NSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKE 354
Query: 463 PAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNS---IVDWYCKLHL 519
P+VV++ + + N F A+ V M ++G P+ T ++ I+ LH
Sbjct: 355 KGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHS 414
Query: 520 REEAYNF 526
+E + F
Sbjct: 415 GKEVHGF 421
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 147/314 (46%), Gaps = 15/314 (4%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
M+ DM A ++ +N+L+S L ++A L ++ G++PD +T+N+L Y
Sbjct: 281 MVFDMMD---AKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYA 337
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+P++A++V+ +M+ +G P++V++T++ S ++G AL++ +M E+ + P+
Sbjct: 338 TLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAA 397
Query: 121 TYTTLLS--GFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFK 178
T +TLL G ++ + F + C + T AL+ MYG G ++F
Sbjct: 398 TMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVAT--ALVDMYGKSGDLQSAIEIFW 455
Query: 179 EIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 238
IK + + +WN +L + G E F M AG P+ TF +++S G
Sbjct: 456 GIK----NKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSG 511
Query: 239 SFDQARAVYKRMLEA-GVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTY 297
+ + M G+ P + + ++ L R G +++ + M KP+ +
Sbjct: 512 LVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMS---LKPDATIW 568
Query: 298 SSLLHAYANGKEFE 311
+ L + ++ E
Sbjct: 569 GAFLSSCKIHRDLE 582
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 149/342 (43%), Gaps = 45/342 (13%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRP------------- 47
+L +M+ GL PD+ T+N+L+S + L ++A+ + + +++AGL+P
Sbjct: 177 LLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVA 236
Query: 48 ----------------------DMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIV 85
D+ L+D+Y K+ A V M+++ +IV
Sbjct: 237 EPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK----NIV 292
Query: 86 TYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEM 145
+ SL+S LL++A L +M ++ IKPD T+ +L SG+ K E A+ V +M
Sbjct: 293 AWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKM 352
Query: 146 RTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLD 205
+ G PN+ ++ A+ G F KVF +++ P+ T +TLL + G L
Sbjct: 353 KEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLL 412
Query: 206 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGV-TPDLSTYNA 264
V R + + L+ Y + G A ++ G+ L+++N
Sbjct: 413 HSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIF-----WGIKNKSLASWNC 467
Query: 265 VLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYAN 306
+L A G E+ S M +P+ +T++S+L N
Sbjct: 468 MLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKN 509
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Query: 405 LMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPA 464
L+ + S F + I +L G+E ++ N +I Y RNGK+ ++++ N MKD
Sbjct: 95 LLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR- 153
Query: 465 PVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAY 524
++ ++N+ +++Y +AIG++ M G KPD T+NS++ Y L ++A
Sbjct: 154 ---NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAI 210
Query: 525 NFVHNLSSLDLHVSEEEKGRLLERIAE 551
+ + L S LL+ +AE
Sbjct: 211 AVLKRMQIAGLKPSTSSISSLLQAVAE 237
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 98/216 (45%), Gaps = 19/216 (8%)
Query: 31 EEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESR-GFPPSIVTYTS 89
EE + F + AG+ PD +T+ ++L V S +E + M SR G P+I +
Sbjct: 479 EEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSC 538
Query: 90 LISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAG 149
++ R G L+EA + M +KPD + LS + ELA ++ ++
Sbjct: 539 MVDLLGRSGYLDEAWDFIQTM---SLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQV-- 593
Query: 150 CKP-NICTFNALIKMYGDRGMFAEMGKVFKEIKACQCS-PDIVTW---NTLLAVF---GQ 201
+P N + +I +Y + + ++ ++ ++ + D+ +W + + +F G+
Sbjct: 594 LEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGK 653
Query: 202 NGLDS-----EVSGVFKEMKRAGFVPERETFNTLIS 232
D E+ + EMK++G+VP+ + IS
Sbjct: 654 THPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDIS 689
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 162/342 (47%), Gaps = 52/342 (15%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
++S GL D T++ LI CC + E + + G RP M N L+++Y K
Sbjct: 52 LQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNL 111
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+A ++ QM R +++++T++ISAY + + ++ALEL M+ +++P+VYTY++
Sbjct: 112 LNDAHQLFDQMPQR----NVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSS 167
Query: 125 LLSGFVNAKKD--ELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
+L N D L + +E G + ++ +ALI ++ G + VF E+
Sbjct: 168 VLRS-CNGMSDVRMLHCGIIKE----GLESDVFVRSALIDVFAKLGEPEDALSVFDEM-- 220
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETF--------------- 227
+ D + WN+++ F QN +FK MKRAGF+ E+ T
Sbjct: 221 --VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLEL 278
Query: 228 ------------------NTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAAL 269
N L+ Y +CGS + A V+ +M E D+ T++ +++ L
Sbjct: 279 GMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER----DVITWSTMISGL 334
Query: 270 ARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE 311
A+ G +++ K+ M++ KPN +T +L A ++ E
Sbjct: 335 AQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLE 376
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 149/346 (43%), Gaps = 17/346 (4%)
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVY 247
D T++ L+ N E + + + + G P N LI+ Y + + A ++
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 248 KRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG 307
+M + V ++ +++A ++ + +++ ++L M +PN TYSS+L + NG
Sbjct: 120 DQMPQRNVI----SWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS-CNG 174
Query: 308 KEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTL 367
+M L I + + + L+ V +K L E E A F + + D
Sbjct: 175 MSDVRM--LHCGIIKEGLESDVFVRSALIDVFAK---LGEPEDALSVFDEM-VTGDAIVW 228
Query: 368 NAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILE 427
N+++ + + ++ K M +GF S++ + I++
Sbjct: 229 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK 288
Query: 428 KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGE 487
+ DLI N ++ YC+ G + +A R+ N+MK+ DV+T++T ++ A N E
Sbjct: 289 --YDQDLILNNALVDMYCKCGSLEDALRVFNQMKER----DVITWSTMISGLAQNGYSQE 342
Query: 488 AIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSL 533
A+ + + M G KP+ T ++ L E+ + + ++ L
Sbjct: 343 ALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKL 388
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 130/590 (22%), Positives = 250/590 (42%), Gaps = 74/590 (12%)
Query: 16 TFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQM 75
T+ +LI C + + ++ + I + + D + N +L +YGK ++A EV M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 76 ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKD 135
R ++V+YTS+I+ Y ++G EA+ L +M+++ + PD + + +++ ++
Sbjct: 129 PER----NLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDV 184
Query: 136 ELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTL 195
L ++ ++ ++ NALI MY ++ +VF I D+++W+++
Sbjct: 185 GLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPM----KDLISWSSI 240
Query: 196 LAVFGQNGLDSEVSGVFKEMKRAG-FVPERETFNTLISA--------------------- 233
+A F Q G + E KEM G F P F + + A
Sbjct: 241 IAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSE 300
Query: 234 --------------YSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSE 279
Y+RCG + AR V+ ++ PD +++N ++A LA G +++
Sbjct: 301 LAGNAIAGCSLCDMYARCGFLNSARRVFDQIER----PDTASWNVIIAGLANNGYADEAV 356
Query: 280 KVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVN 339
V S+M + P+ ++ SLL A K AL++ + L L + N
Sbjct: 357 SVFSQMRSSGFIPDAISLRSLLCAQT------KPMALSQGMQIHSYIIKWGFLADLTVCN 410
Query: 340 S---KFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFT 396
S + F ++ F F+ D + N +L+ + + + ++ K M S
Sbjct: 411 SLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECE 470
Query: 397 LSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRI 456
+L+ + + + L+ G+ P+ N +I Y + G + +A+RI
Sbjct: 471 PDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRI 530
Query: 457 LNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
+ M + DVV+++T + YA + EA+ + + M G +P+ T+ ++
Sbjct: 531 FDSMDN----RDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSH 586
Query: 517 LHLREEAYNFV------HNLSSLDLHVS-----EEEKGRLLERIAEKWIN 555
+ L EE H +S H S GRL E AE++I+
Sbjct: 587 VGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNE--AERFID 634
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/515 (18%), Positives = 214/515 (41%), Gaps = 57/515 (11%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ + M + L PD F ++I C + S +L ++ ++ NAL+ +Y
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYV 214
Query: 61 KSRRPKEAMEVLKQMESRGFP-PSIVTYTSLISAYVRDGLLEEAL-ELKNQMVEKHIKPD 118
+ + +A V G P +++++S+I+ + + G EAL LK + P+
Sbjct: 215 RFNQMSDASRVF-----YGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPN 269
Query: 119 VYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFK 178
Y + + L + + + ++ + N +L MY G +VF
Sbjct: 270 EYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFD 329
Query: 179 EIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 238
+I+ PD +WN ++A NG E VF +M+ +GF+P+ + +L+ A ++
Sbjct: 330 QIE----RPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPM 385
Query: 239 SFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYS 298
+ Q ++ +++ G DL+ N++L + E+ R + V+++
Sbjct: 386 ALSQGMQIHSYIIKWGFLADLTVCNSLLTMYT---FCSDLYCCFNLFEDFRNNADSVSWN 442
Query: 299 SLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKR 358
++L A ++ +M L + + + + + L+ + L K
Sbjct: 443 TILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKT 502
Query: 359 GIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKS 418
G+ + N ++ +Y + + + +I ++S + +++L+ ++++ ++
Sbjct: 503 GLAPEQFIKNGLIDMYAKCGSLGQARRI----FDSMDNRDVVSWSTLIVGYAQSGFGEEA 558
Query: 419 EMILREILEKGIEPDLISYNIVIYA----------------------------YC----- 445
++ +E+ GIEP+ +++ V+ A +C
Sbjct: 559 LILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVD 618
Query: 446 ---RNGKMTEAKRILNEMKDPAPVPDVVTYNTFVA 477
R G++ EA+R ++EMK PDVV + T ++
Sbjct: 619 LLARAGRLNEAERFIDEMKLE---PDVVVWKTLLS 650
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 109/249 (43%), Gaps = 27/249 (10%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIKL----AGLRPDMVTYNALLDVYGKSRRPKE 67
PD T L+ C S +L+L ++ GL P+ N L+D+Y K +
Sbjct: 471 PDHITMGNLLRGCVEIS----SLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQ 526
Query: 68 AMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLS 127
A + M++R +V++++LI Y + G EEAL L +M I+P+ T+ +L+
Sbjct: 527 ARRIFDSMDNR----DVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLT 582
Query: 128 GFVNAKKDELAMRVFEEMRTA-GCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCS 186
+ E ++++ M+T G P + ++ + G E + E+K
Sbjct: 583 ACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKL---E 639
Query: 187 PDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNT-----LISAYSRCGSFD 241
PD+V W TLL+ G V K A + + + FN+ L S ++ G+++
Sbjct: 640 PDVVVWKTLLSACKTQG------NVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWE 693
Query: 242 QARAVYKRM 250
A + M
Sbjct: 694 NAALLRSSM 702
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 82/162 (50%), Gaps = 10/162 (6%)
Query: 9 GLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKE 67
GLAP+ N LI + GSL +A +F+ + D+V+++ L+ Y +S +E
Sbjct: 503 GLAPEQFIKNGLIDMYAKCGSL-GQARRIFDSMD----NRDVVSWSTLIVGYAQSGFGEE 557
Query: 68 AMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKH-IKPDVYTYTTLL 126
A+ + K+M+S G P+ VT+ +++A GL+EE L+L M +H I P + ++
Sbjct: 558 ALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVV 617
Query: 127 SGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRG 168
A + A R +EM+ +P++ + L+ +G
Sbjct: 618 DLLARAGRLNEAERFIDEMKL---EPDVVVWKTLLSACKTQG 656
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Query: 393 SGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTE 452
S F + L Y SL+ S +R+ + I IL + D I N ++ Y + G + +
Sbjct: 61 SSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRD 120
Query: 453 AKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
A+ + + M P ++V+Y + + Y+ N EAI + M+++ PDQ + SI+
Sbjct: 121 AREVFDFM----PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSII 175
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 138/277 (49%), Gaps = 4/277 (1%)
Query: 9 GLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLR-PDMVTYNALLDVYGKSRRPK 66
GL P+ C FN L+ C+ G + A + EE+K +G+ P+ +TY+ L+D R K
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDI-NFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSK 249
Query: 67 EAMEVLKQMESR-GFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTL 125
EA+E+ + M S+ G P VT+ +I+ + R G +E A ++ + M + P+VY Y+ L
Sbjct: 250 EAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSAL 309
Query: 126 LSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQC 185
++GF K + A + F+E++ G K + + L+ + G E K+ E+KA +C
Sbjct: 310 MNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRC 369
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
D +T+N +L G E + + G + ++ +++A G ++A
Sbjct: 370 RADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVK 429
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVL 282
M E G+ P +T+N ++ L G E +VL
Sbjct: 430 FLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVL 466
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 128/260 (49%), Gaps = 2/260 (0%)
Query: 44 GLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFP-PSIVTYTSLISAYVRDGLLEE 102
GL+P+ +N L+ + K+ A V+++M+ G P+ +TY++L+ +E
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 103 ALELKNQMVEKH-IKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALI 161
A+EL M+ K I PD T+ +++GF A + E A ++ + M+ GC PN+ ++AL+
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 162 KMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFV 221
+ G E + F E+K D V + TL+ F +NG E + EMK +
Sbjct: 311 NGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCR 370
Query: 222 PERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKV 281
+ T+N ++ S G ++A + + GV + +Y +L AL G E++ K
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKF 430
Query: 282 LSEMENGRCKPNEVTYSSLL 301
LS M P+ T++ L+
Sbjct: 431 LSVMSERGIWPHHATWNELV 450
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/479 (21%), Positives = 198/479 (41%), Gaps = 78/479 (16%)
Query: 44 GLRPDMVTYNALLDVYGKSRRPKEAMEVLKQM--ESRGFPPSIVTYTSLISAYVRDGLLE 101
G + TY+ LLD + ++ +L QM E+ F S+ + +L+ + R L +
Sbjct: 84 GFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESL--FLNLMRHFSRSDLHD 141
Query: 102 EALELKNQM-VEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMR-TAGCKPNICTFNA 159
+ +E+ N + V +KP + +T L+ +++ + L+ ++ + G +PN C FN
Sbjct: 142 KVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNI 201
Query: 160 LIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAG 219
L+K + C + + L V +EMKR+G
Sbjct: 202 LVKHH--------------------CKNGDINFAFL---------------VVEEMKRSG 226
Query: 220 F-VPERETFNTLISAYSRCGSFDQARAVYKRML-EAGVTPDLSTYNAVLAALARGGLWEQ 277
P T++TL+ +A +++ M+ + G++PD T+N ++ R G E+
Sbjct: 227 ISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVER 286
Query: 278 SEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVL 337
++K+L M+ C PN YS+L++ + GKI
Sbjct: 287 AKKILDFMKKNGCNPNVYNYSALMNGFCK---------------VGKI------------ 319
Query: 338 VNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTL 397
EA+ F E KK G+ D +++ + R + K+L M S
Sbjct: 320 --------QEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRA 371
Query: 398 SLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRIL 457
YN ++ S ++ +L + +G+ + SY I++ A C NG++ +A + L
Sbjct: 372 DTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFL 431
Query: 458 NEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
+ M + P T+N V + + V+ ++ G P ++ ++V+ CK
Sbjct: 432 SVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICK 490
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 136/288 (47%), Gaps = 4/288 (1%)
Query: 29 LYEEALELFEEIK-LAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESR-GFPPSIVT 86
L+++ +E+F I+ +A ++P + + L++ S + ++L + G P+
Sbjct: 139 LHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCI 198
Query: 87 YTSLISAYVRDGLLEEALELKNQMVEKHIK-PDVYTYTTLLSGFVNAKKDELAMRVFEEM 145
+ L+ + ++G + A + +M I P+ TY+TL+ + + A+ +FE+M
Sbjct: 199 FNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDM 258
Query: 146 RTA-GCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGL 204
+ G P+ TFN +I + G K+ +K C+P++ ++ L+ F + G
Sbjct: 259 ISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGK 318
Query: 205 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNA 264
E F E+K+ G + + TL++ + R G D+A + M + D TYN
Sbjct: 319 IQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNV 378
Query: 265 VLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEK 312
+L L+ G E++ ++L + + N+ +Y +L+A E EK
Sbjct: 379 ILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEK 426
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 115/235 (48%), Gaps = 3/235 (1%)
Query: 4 DMKS-QGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGK 61
DM S +G++PD TFN +I+ CRAG + E A ++ + +K G P++ Y+AL++ + K
Sbjct: 257 DMISKEGISPDPVTFNVMINGFCRAGEV-ERAKKILDFMKKNGCNPNVYNYSALMNGFCK 315
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYT 121
+ +EA + +++ G V YT+L++ + R+G +EA++L +M + D T
Sbjct: 316 VGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLT 375
Query: 122 YTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK 181
Y +L G + + E A+++ ++ + G N ++ ++ G + K +
Sbjct: 376 YNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMS 435
Query: 182 ACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 236
P TWN L+ ++G V R G +P +++ ++ + +
Sbjct: 436 ERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICK 490
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 99/476 (20%), Positives = 191/476 (40%), Gaps = 83/476 (17%)
Query: 85 VTYTSLISAYVRDGLLEEALELKNQMVE-KHIKPDVYTYTTLLSGFVNAKKDELAMRVFE 143
+++ S +S R+ + L++ N+ + K + TY+ LL V KK +
Sbjct: 54 ISHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILH 113
Query: 144 EMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA-CQCSPDIVTWNTLLAVFGQN 202
+M+ C+ F L++ + + ++ ++F I+ + P + +T L + +
Sbjct: 114 QMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDS 173
Query: 203 GLDSEVSGVFKEMKRA----GFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPD 258
G EV+ K + A G P FN L+ + + G + A V + M +G++
Sbjct: 174 G---EVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGIS-- 228
Query: 259 LSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL---LHAYANGKEFEKMNA 315
PN +TYS+L L A++ KE
Sbjct: 229 --------------------------------YPNSITYSTLMDCLFAHSRSKE------ 250
Query: 316 LAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYG 375
A E++ I+ K GI D T N M++ +
Sbjct: 251 -AVELFEDMIS------------------------------KEGISPDPVTFNVMINGFC 279
Query: 376 RKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLI 435
R V + KIL FM ++G ++ Y++LM + ++++ E+ + G++ D +
Sbjct: 280 RAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTV 339
Query: 436 SYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCM 495
Y ++ +CRNG+ EA ++L EMK D +TYN + ++ EA+ ++
Sbjct: 340 GYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQW 399
Query: 496 IKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEKGRLLERIAE 551
+G ++ +Y I++ C E+A F+ +S + L+ R+ E
Sbjct: 400 GSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCE 455
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 126/247 (51%), Gaps = 10/247 (4%)
Query: 45 LRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEAL 104
++ D+V A++D K A + +M +G P+++TY +I ++ G +A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 105 ELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMY 164
+L M+EK I PD+ T++ L++ FV +K A +++EM P T+N++I +
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 165 GDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQ-----NGLDSEVSGVFKEMKRAG 219
+ + ++ + + CSPD+VT++TL+ + + NG++ +F EM R G
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGME-----IFCEMHRRG 180
Query: 220 FVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSE 279
V T+ TLI + + G D A+ + M+ GV PD T++ +LA L ++
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Query: 280 KVLSEME 286
+L +++
Sbjct: 241 AILEDLQ 247
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 109/198 (55%), Gaps = 2/198 (1%)
Query: 1 MLMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+ +M +G+ P++ T+N +I S C +G + +A +L + + PD+VT++AL++ +
Sbjct: 32 LFTEMHEKGIFPNVLTYNCMIDSFCHSGR-WSDADQLLRHMIEKQINPDIVTFSALINAF 90
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
K R+ EA E+ K+M P+ +TY S+I + + +++A + + M K PDV
Sbjct: 91 VKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDV 150
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
T++TL++G+ AK+ + M +F EM G N T+ LI + G + E
Sbjct: 151 VTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNE 210
Query: 180 IKACQCSPDIVTWNTLLA 197
+ +C +PD +T++ +LA
Sbjct: 211 MISCGVAPDYITFHCMLA 228
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 105/227 (46%), Gaps = 5/227 (2%)
Query: 110 MVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGM 169
M + HIK DV T ++ A +F EM G PN+ T+N +I + G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 170 FAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNT 229
+++ ++ + + Q +PDIVT++ L+ F + SE ++KEM R P T+N+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 230 LISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGR 289
+I + + D A+ + M G +PD+ T++ ++ + + ++ EM
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 290 CKPNEVTYSSLLHAYANGKEFEKMNALAEEIYS-----GKITTHAVL 331
N VTY++L+H + + + L E+ S IT H +L
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 227
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 113/246 (45%)
Query: 75 MESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKK 134
M +V T+++ +DG A L +M EK I P+V TY ++ F ++ +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 135 DELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNT 194
A ++ M P+I TF+ALI + +E +++KE+ P +T+N+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 195 LLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAG 254
++ F + + + M G P+ TF+TLI+ Y + D ++ M G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 255 VTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMN 314
+ + TY ++ + G + ++ +L+EM + P+ +T+ +L + KE K
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Query: 315 ALAEEI 320
A+ E++
Sbjct: 241 AILEDL 246
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 111/224 (49%)
Query: 238 GSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTY 297
G+ A+ ++ M E G+ P++ TYN ++ + G W ++++L M + P+ VT+
Sbjct: 24 GNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTF 83
Query: 298 SSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKK 357
S+L++A+ ++ + + +E+ I + +++ K D + +A+
Sbjct: 84 SALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMAS 143
Query: 358 RGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRK 417
+G D+ T + +++ Y + K V +I M+ G + Y +L++ + +
Sbjct: 144 KGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDA 203
Query: 418 SEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMK 461
++ +L E++ G+ PD I+++ ++ C ++ +A IL +++
Sbjct: 204 AQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 247
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 110/243 (45%)
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
K ++ A++ G +F E+ P+++T+N ++ F +G S+
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
+ + M P+ TF+ LI+A+ + +A +YK ML + P TYN+++
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAV 330
+ + ++++L M + C P+ VT+S+L++ Y K + + E++ I + V
Sbjct: 127 KQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 186
Query: 331 LLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFM 390
TL+ + L A+ E G+ D T + ML+ KK + K IL+ +
Sbjct: 187 TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Query: 391 YES 393
+S
Sbjct: 247 QKS 249
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 94/185 (50%)
Query: 348 AEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMY 407
A++ F E ++GI ++ T N M+ + + +++L+ M E + +++L+
Sbjct: 29 AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALIN 88
Query: 408 LHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVP 467
+ R ++E I +E+L I P I+YN +I +C+ ++ +AKR+L+ M P
Sbjct: 89 AFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSP 148
Query: 468 DVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFV 527
DVVT++T + Y + + M ++G + TY +++ +C++ + A + +
Sbjct: 149 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 208
Query: 528 HNLSS 532
+ + S
Sbjct: 209 NEMIS 213
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 78/145 (53%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M + P T+N++I ++A + + + G PD+VT++ L++ Y K++
Sbjct: 105 EMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAK 164
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
R ME+ +M RG + VTYT+LI + + G L+ A +L N+M+ + PD T+
Sbjct: 165 RVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFH 224
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTA 148
+L+G + K+ A + E+++ +
Sbjct: 225 CMLAGLCSKKELRKAFAILEDLQKS 249
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/292 (19%), Positives = 124/292 (42%), Gaps = 35/292 (11%)
Query: 250 MLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKE 309
M ++ + D+ A++ L + G ++ + +EM PN +TY+ ++ ++
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFC---- 56
Query: 310 FEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNA 369
+SG+ + LL+ ++ ++ I DI T +A
Sbjct: 57 -----------HSGRWSDADQLLRHMI--------------------EKQINPDIVTFSA 85
Query: 370 MLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKG 429
+++ + +++ V++ +I K M + YNS++ + ++ +L + KG
Sbjct: 86 LINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG 145
Query: 430 IEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAI 489
PD+++++ +I YC+ ++ I EM V + VTY T + + A
Sbjct: 146 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQ 205
Query: 490 GVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEE 541
++ MI G PD T++ ++ C +A+ + +L + H E+E
Sbjct: 206 DLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEDHHLEDE 257
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
ML M S+G +PD+ TF+TLI+ C+A + + +E+F E+ G+ + VTY L+ +
Sbjct: 137 MLDSMASKGCSPDVVTFSTLINGYCKAKRV-DNGMEIFCEMHRRGIVANTVTYTTLIHGF 195
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALEL 106
+ A ++L +M S G P +T+ +++ L +A +
Sbjct: 196 CQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 242
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 133/280 (47%), Gaps = 1/280 (0%)
Query: 17 FNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQME 76
+N L+S L EE L+ E+ + PD+ T+N L++ Y K EA + + +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 77 SRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDE 136
G P TYTS I+ + R ++ A ++ +M + + +YT L+ G AKK +
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 137 LAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLL 196
A+ + +M+ C PN+ T+ LI G +E +FK++ PD + L+
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 197 AVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVT 256
F E SG+ + M G +P T+N LI + + + +A + +MLE +
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLV 361
Query: 257 PDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVT 296
PDL TYN ++A G + + ++LS ME PN+ T
Sbjct: 362 PDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 127/253 (50%), Gaps = 3/253 (1%)
Query: 10 LAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEA 68
++PD+ TFNTL++ C+ G + EA + + AG PD TY + + + + + A
Sbjct: 151 VSPDIYTFNTLVNGYCKLGYVV-EAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAA 209
Query: 69 MEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSG 128
+V K+M G + V+YT LI ++EAL L +M + + P+V TYT L+
Sbjct: 210 FKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDA 269
Query: 129 FVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPD 188
+ + AM +F++M +G KP+ C + LI+ + E + + + P+
Sbjct: 270 LCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPN 329
Query: 189 IVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYK 248
++T+N L+ F + + + G+ +M VP+ T+NTLI+ G+ D A +
Sbjct: 330 VITYNALIKGFCKKNVHKAM-GLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLS 388
Query: 249 RMLEAGVTPDLST 261
M E+G+ P+ T
Sbjct: 389 LMEESGLVPNQRT 401
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 125/250 (50%), Gaps = 1/250 (0%)
Query: 52 YNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMV 111
YN LL + +E + +M P I T+ +L++ Y + G + EA + ++
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 112 EKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFA 171
+ PD +TYT+ ++G K+ + A +VF+EM GC N ++ LI +
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 172 EMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLI 231
E + ++K C P++ T+ L+ +G SE +FK+M +G P+ + LI
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 232 SAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCK 291
++ + D+A + + MLE G+ P++ TYNA++ + + ++ +LS+M
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNV-HKAMGLLSKMLEQNLV 361
Query: 292 PNEVTYSSLL 301
P+ +TY++L+
Sbjct: 362 PDLITYNTLI 371
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 140/281 (49%), Gaps = 9/281 (3%)
Query: 192 WNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRML 251
+N LL+ + GL E+ ++ EM P+ TFNTL++ Y + G +A+ ++
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 252 EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE 311
+AG PD TY + + R + + KV EM C NEV+Y+ L++ K+ +
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 312 KMNAL----AEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTL 367
+ +L ++ + T+ VL+ L K +EA + F + + GI D
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQK----SEAMNLFKQMSESGIKPDDCMY 298
Query: 368 NAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILE 427
++ + + + + +L+ M E+G ++ YN+L+ + +N K+ +L ++LE
Sbjct: 299 TVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLE 357
Query: 428 KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPD 468
+ + PDLI+YN +I C +G + A R+L+ M++ VP+
Sbjct: 358 QNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 113/233 (48%), Gaps = 2/233 (0%)
Query: 87 YTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMR 146
Y +L+S+ R GL+EE L +M+E + PD+YT+ TL++G+ A + +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 147 TAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLL-AVFGQNGLD 205
AGC P+ T+ + I + R KVFKE+ C + V++ L+ +F +D
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 206 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAV 265
+S + K MK P T+ LI A G +A ++K+M E+G+ PD Y +
Sbjct: 243 EALSLLVK-MKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVL 301
Query: 266 LAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAE 318
+ + G +++ +L M PN +TY++L+ + + M L++
Sbjct: 302 IQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAMGLLSK 354
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 115/255 (45%), Gaps = 35/255 (13%)
Query: 262 YNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIY 321
YN +L++LAR GL E+ +++ +EM P+ T+++L++ Y
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYC---------------- 166
Query: 322 SGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVA 381
K ++ EA+ + G D T + ++ + R+K V
Sbjct: 167 -------------------KLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVD 207
Query: 382 KTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVI 441
K+ K M ++G + Y L+Y + ++ +L ++ + P++ +Y ++I
Sbjct: 208 AAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLI 267
Query: 442 YAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCK 501
A C +G+ +EA + +M + PD Y + ++ + EA G+++ M++ G
Sbjct: 268 DALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLM 327
Query: 502 PDQNTYNSIVDWYCK 516
P+ TYN+++ +CK
Sbjct: 328 PNVITYNALIKGFCK 342
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 82/153 (53%), Gaps = 1/153 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L+ MK P++ T+ LI EA+ LF+++ +G++PD Y L+ +
Sbjct: 247 LLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFC 306
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
EA +L+ M G P+++TY +LI + + + +A+ L ++M+E+++ PD+
Sbjct: 307 SGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLI 365
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPN 153
TY TL++G ++ + A R+ M +G PN
Sbjct: 366 TYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 97/224 (43%), Gaps = 11/224 (4%)
Query: 307 GKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITT 366
G FE L + Y+ +++ A +F + E + + E + + DI T
Sbjct: 109 GDSFEIKYKLTPKCYNNLLSSLA-----------RFGLVEEMKRLYTEMLEDLVSPDIYT 157
Query: 367 LNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREIL 426
N +++ Y + V + + + ++ ++G Y S + H R + + + +E+
Sbjct: 158 FNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMT 217
Query: 427 EKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFG 486
+ G + +SY +IY K+ EA +L +MKD P+V TY + +
Sbjct: 218 QNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKS 277
Query: 487 EAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
EA+ + + M + G KPD Y ++ +C +EA + ++
Sbjct: 278 EAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHM 321
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 87/190 (45%), Gaps = 10/190 (5%)
Query: 362 HDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMI 421
H++T+ ++++L +++ + KI M +S ++ +++ R RK +
Sbjct: 58 HNVTSYASLVTLLCSQEIPYEVPKITILMIKSCNSV-----RDALFVVDFCRTMRKGDSF 112
Query: 422 LREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAA 481
EI K + P YN ++ + R G + E KR+ EM + PD+ T+NT V Y
Sbjct: 113 --EIKYK-LTPK--CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCK 167
Query: 482 NSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEE 541
EA V +I+ GC PD TY S + +C+ + A+ ++ H +E
Sbjct: 168 LGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVS 227
Query: 542 KGRLLERIAE 551
+L+ + E
Sbjct: 228 YTQLIYGLFE 237
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 71/164 (43%)
Query: 368 NAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILE 427
N +LS R LV + ++ M E + + +N+L+ + + +++ + +++
Sbjct: 124 NNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQ 183
Query: 428 KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGE 487
G +PD +Y I +CR ++ A ++ EM + V+Y + E
Sbjct: 184 AGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDE 243
Query: 488 AIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLS 531
A+ ++ M C P+ TY ++D C + EA N +S
Sbjct: 244 ALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMS 287
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/425 (21%), Positives = 184/425 (43%), Gaps = 4/425 (0%)
Query: 68 AMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLS 127
A+ + K+M G P ++T+ L++ + G +E+A L +M E P+ +Y TL+
Sbjct: 140 ALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIK 199
Query: 128 GFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE--IKACQC 185
G + + A+ +F M G +PN T N ++ +G+ K E + + Q
Sbjct: 200 GLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQA 259
Query: 186 SP--DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
+ DIV L+ +NG + V+KEM + + +N +I G+ A
Sbjct: 260 NAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAA 319
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
M++ GV PD+ TYN +++AL + G ++++ + M+NG P++++Y ++
Sbjct: 320 YGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQG 379
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
+ + N + + +L ++ ++ + A G+ +
Sbjct: 380 LCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPN 439
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILR 423
+ T NA++ Y + + + M + YN L+ + R + +
Sbjct: 440 VYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYD 499
Query: 424 EILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANS 483
E+L +G +PD+I+Y ++ C G++ +A+ +L+ ++ D V + Y
Sbjct: 500 EMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQ 559
Query: 484 MFGEA 488
GEA
Sbjct: 560 RPGEA 564
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 164/396 (41%), Gaps = 42/396 (10%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
++ +M+ G +P+ ++NTLI + + ++AL LF + G+RP+ VT N ++
Sbjct: 178 LVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALC 237
Query: 61 K----SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIK 116
+ K+ +E + P IV T L+ + ++G + +ALE+ +M +K++
Sbjct: 238 QKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVP 297
Query: 117 PDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEM--- 173
D Y ++ G ++ A +M G P++ T+N LI G F E
Sbjct: 298 ADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDL 357
Query: 174 ------GKV------FKEIKACQC--------------------SPDIVTWNTLLAVFGQ 201
G V +K I C P+++ WN ++ +G+
Sbjct: 358 HGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGR 417
Query: 202 NGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLST 261
G S V M G P T N LI Y + G A V M + PD +T
Sbjct: 418 YGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTT 477
Query: 262 YNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIY 321
YN +L A G + ++ EM C+P+ +TY+ L+ +K +L I
Sbjct: 478 YNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQ 537
Query: 322 SGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKK 357
+ IT V +++ K+ L A+L +KK
Sbjct: 538 ATGITIDHV---PFLILAKKYTRLQRPGEAYLVYKK 570
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 169/403 (41%), Gaps = 16/403 (3%)
Query: 5 MKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M G+ P L T N L++ C+AG + E+A L E++ G P+ V+YN L+
Sbjct: 147 MIYSGVIPGLITHNHLLNGLCKAGYI-EKADGLVREMREMGPSPNCVSYNTLIKGLCSVN 205
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDG--------LLEEALELKNQMVEKHI 115
+A+ + M G P+ VT ++ A + G LLEE L+ + +
Sbjct: 206 NVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSS----QANA 261
Query: 116 KPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRG-MFAEMG 174
D+ T L+ A+ V++EM + +N +I+ G M A G
Sbjct: 262 PLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYG 321
Query: 175 KVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAY 234
+ +K +PD+ T+NTL++ + G E + M+ G P++ ++ +I
Sbjct: 322 FMCDMVKR-GVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGL 380
Query: 235 SRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNE 294
G ++A ML++ + P++ +N V+ R G + VL+ M + KPN
Sbjct: 381 CIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNV 440
Query: 295 VTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLE 354
T ++L+H Y G + E+ S KI L+ L A + E
Sbjct: 441 YTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDE 500
Query: 355 FKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTL 397
+RG DI T ++ K + K +L + +G T+
Sbjct: 501 MLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITI 543
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 119/254 (46%), Gaps = 8/254 (3%)
Query: 2 LMDMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLD--- 57
+ DM +G+ PD+ T+NTLIS C+ G ++EA +L ++ G+ PD ++Y ++
Sbjct: 323 MCDMVKRGVNPDVFTYNTLISALCKEGK-FDEACDLHGTMQNGGVAPDQISYKVIIQGLC 381
Query: 58 VYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKP 117
++G R A E L M P ++ + +I Y R G AL + N M+ +KP
Sbjct: 382 IHGDVNR---ANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKP 438
Query: 118 DVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVF 177
+VYT L+ G+V + A V EMR+ P+ T+N L+ G +++
Sbjct: 439 NVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLY 498
Query: 178 KEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 237
E+ C PDI+T+ L+ G + + ++ G + F L Y+R
Sbjct: 499 DEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRL 558
Query: 238 GSFDQARAVYKRML 251
+A VYK+ L
Sbjct: 559 QRPGEAYLVYKKWL 572
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 148/333 (44%), Gaps = 14/333 (4%)
Query: 213 KEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARG 272
K+M +G +P T N L++ + G ++A + + M E G +P+ +YN ++ L
Sbjct: 145 KKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSV 204
Query: 273 GLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNA-LAEEIY-SGKITTHAV 330
+++ + + M +PN VT + ++HA N L EEI S +
Sbjct: 205 NNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLD 264
Query: 331 LLKTLVLVNSKFDF--LAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILK 388
++ +L++S F + +A + E ++ +P D N ++ + L + N +
Sbjct: 265 IVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVII-----RGLCSSGNMVAA 319
Query: 389 F-----MYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYA 443
+ M + G + YN+L+ + F ++ + + G+ PD ISY ++I
Sbjct: 320 YGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQG 379
Query: 444 YCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPD 503
C +G + A L M + +P+V+ +N + Y A+ V+ M+ G KP+
Sbjct: 380 LCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPN 439
Query: 504 QNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLH 536
T N+++ Y K +A+ + + S +H
Sbjct: 440 VYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIH 472
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 158/369 (42%), Gaps = 41/369 (11%)
Query: 187 PDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAV 246
P ++T N LL + G + G+ +EM+ G P ++NTLI + D+A +
Sbjct: 154 PGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYL 213
Query: 247 YKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSE--MENGRCK-PNEVTYSSLL-- 301
+ M + G+ P+ T N ++ AL + G+ + K L E +++ + P ++ ++L
Sbjct: 214 FNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMD 273
Query: 302 HAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIP 361
+ NG + + + +E+ + +V+ ++ + A + KRG+
Sbjct: 274 SCFKNGNVVQALE-VWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVN 332
Query: 362 HDITTLNAMLS-------------LYGRKK-------------------LVAKTNKILKF 389
D+ T N ++S L+G + + N+ +F
Sbjct: 333 PDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEF 392
Query: 390 MYESGFTLSLPG---YNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCR 446
+ + LP +N ++ + R + + +L +L G++P++ + N +I+ Y +
Sbjct: 393 LLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVK 452
Query: 447 NGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNT 506
G++ +A + NEM+ PD TYN + A + M+++GC+PD T
Sbjct: 453 GGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIIT 512
Query: 507 YNSIVDWYC 515
Y +V C
Sbjct: 513 YTELVRGLC 521
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 119/580 (20%), Positives = 242/580 (41%), Gaps = 90/580 (15%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV- 71
D C FNTLI + ++ +F ++ G++ ++ TY+ ++ Y K A+ +
Sbjct: 306 DPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLF 365
Query: 72 LKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVN 131
+ S ++ YT+LI + + G +++A++L +M++ I PD TY LL
Sbjct: 366 VNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPK 425
Query: 132 AKKDELAMRVFEEMRTAGCKPNICTFNAL------------------------------I 161
+ + AM + + + GC N + L
Sbjct: 426 CHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTT 485
Query: 162 KMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFV 221
+ R A + ++ K + C+P ++N+++ Q + +++ + ++ FV
Sbjct: 486 ALCSQRNYIAALSRIEKMVNL-GCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFV 544
Query: 222 PERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKV 281
P+ +T+ +++ + D A A+ M E G+ P ++ Y++++ +L + G ++E+
Sbjct: 545 PDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEET 604
Query: 282 LSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKIT----THAVLLKTLV- 336
++M +P+E+ Y +++ YA ++ N L EE+ + T+ VL+ V
Sbjct: 605 FAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVK 664
Query: 337 --LVNSKFDFLAEAEHAFL------------EFKKRG----------------IPHD--- 363
++ +L + L F K+G I HD
Sbjct: 665 MGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIA 724
Query: 364 -ITTLNAMLSLYGRKK-----LVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRK 417
IT L+ + RKK + K+L+ + + +S+P S N+
Sbjct: 725 YITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIP---------SSLGNYGS 775
Query: 418 SEMILREI--LEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTF 475
+ I ++K I P+L +N +I YC G++ EA L M+ VP++VTY
Sbjct: 776 KSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTIL 835
Query: 476 VATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYC 515
+ ++ AI + + C+PDQ Y++++ C
Sbjct: 836 MKSHIEAGDIESAIDLFE---GTNCEPDQVMYSTLLKGLC 872
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/468 (19%), Positives = 197/468 (42%), Gaps = 36/468 (7%)
Query: 68 AMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLS 127
A+ +++M + G P +Y S+I ++ ++E+ L N + E PDV TY +++
Sbjct: 496 ALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVN 555
Query: 128 GFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSP 187
+ A + + M G +P + ++++I G +G E + F ++ P
Sbjct: 556 ELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQP 615
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVY 247
D + + ++ + +NG E + + +E+ + P T+ LIS + + G ++
Sbjct: 616 DEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYL 675
Query: 248 KRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG 307
+MLE G++P++ Y A++ + G ++ S + M K + + Y +LL
Sbjct: 676 DKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRA 735
Query: 308 KEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTL 367
+K + E K+ + K LV + S
Sbjct: 736 MARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSS-------------------------- 769
Query: 368 NAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILE 427
L YG K + +K +L +N+++ + ++ L + +
Sbjct: 770 ---LGNYGSKSFAMEVIGKVK----KSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQK 822
Query: 428 KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGE 487
+GI P+L++Y I++ ++ G + A ++ + PD V Y+T + +
Sbjct: 823 EGIVPNLVTYTILMKSHIEAGDIESA---IDLFEGTNCEPDQVMYSTLLKGLCDFKRPLD 879
Query: 488 AIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDL 535
A+ ++ M K G P++++Y ++ C L EA V ++++LD+
Sbjct: 880 ALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDI 927
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/458 (21%), Positives = 187/458 (40%), Gaps = 50/458 (10%)
Query: 10 LAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAM 69
PD+ T+ +++ + + A + + ++ GLRP + Y++++ GK R EA
Sbjct: 543 FVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAE 602
Query: 70 EVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGF 129
E +M G P + Y +I+ Y R+G ++EA EL ++V+ ++P +TYT L+SGF
Sbjct: 603 ETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGF 662
Query: 130 VNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDI 189
V E + ++M G PN+ + ALI + +G F +F + D
Sbjct: 663 VKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDH 722
Query: 190 VTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKR 249
+ + TLL+ + + V E + + L+S S G++ +
Sbjct: 723 IAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEV 782
Query: 250 M--LEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG 307
+ ++ + P+L +N ++ G +++ L M+ PN VTY+ L+ ++
Sbjct: 783 IGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEA 842
Query: 308 KEFEKMNALAEEIYSG-----KITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPH 362
+ E A +++ G ++ LLK L D LA LE +K GI
Sbjct: 843 GDIES----AIDLFEGTNCEPDQVMYSTLLKGLCDFKRPLDALA----LMLEMQKSGINP 894
Query: 363 DITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMIL 422
+ + +L +L + K++K
Sbjct: 895 NKDSYEKLLQCLCYSRLTMEAVKVVK---------------------------------- 920
Query: 423 REILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEM 460
++ I P I++ +IY C K+ EA+ + M
Sbjct: 921 -DMAALDIWPRSINHTWLIYILCEEKKLREARALFAIM 957
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 109/565 (19%), Positives = 216/565 (38%), Gaps = 53/565 (9%)
Query: 8 QGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKE 67
G+ PD ++++ C ++EA + I +G P + + ++D R E
Sbjct: 125 NGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLE 184
Query: 68 AMEVLKQMESRG------------------------------------FPPSIVTYTSLI 91
A +Q++ RG P + Y SL
Sbjct: 185 AFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLF 244
Query: 92 SAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCK 151
+ + G EA L + M D YT L+ + +AMR++ M +
Sbjct: 245 YCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFE 304
Query: 152 PNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNG-LDSEVSG 210
+ C FN LI + GM + +F ++ ++ T++ ++ + + G +D +
Sbjct: 305 LDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRL 364
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
+ LI + + G D+A + RML+ G+ PD TY +L L
Sbjct: 365 FVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLP 424
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAV 330
+ + + +L + + C N L G K+ +L EI AV
Sbjct: 425 KCHELKYAMVILQSILDNGCGINPPVIDDL------GNIEVKVESLLGEIARKDANLAAV 478
Query: 331 LLKTLVL-VNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKF 389
L + + S+ +++A A + G + N+++ ++ ++ ++
Sbjct: 479 GLAVVTTALCSQRNYIA-ALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNI 537
Query: 390 MYESGFTLSLPGY----NSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYC 445
+ E F + Y N L + R F I+ + E G+ P + Y+ +I +
Sbjct: 538 IQELDFVPDVDTYLIVVNELCKKNDRDAAF----AIIDAMEELGLRPTVAIYSSIIGSLG 593
Query: 446 RNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQN 505
+ G++ EA+ +M + PD + Y + TYA N EA +V+ ++K +P
Sbjct: 594 KQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSF 653
Query: 506 TYNSIVDWYCKLHLREEAYNFVHNL 530
TY ++ + K+ + E+ ++ +
Sbjct: 654 TYTVLISGFVKMGMMEKGCQYLDKM 678
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 93/187 (49%), Gaps = 4/187 (2%)
Query: 33 ALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLIS 92
A+E+ ++K + P++ +N ++ Y + R EA L+ M+ G P++VTYT L+
Sbjct: 779 AMEVIGKVK-KSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMK 837
Query: 93 AYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKP 152
+++ G +E A++L + +PD Y+TLL G + K+ A+ + EM+ +G P
Sbjct: 838 SHIEAGDIESAIDLFEG---TNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINP 894
Query: 153 NICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVF 212
N ++ L++ + E KV K++ A P + L+ + + E +F
Sbjct: 895 NKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALF 954
Query: 213 KEMKRAG 219
M ++G
Sbjct: 955 AIMVQSG 961
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 91/495 (18%), Positives = 185/495 (37%), Gaps = 9/495 (1%)
Query: 44 GLRPDMVTYNALLDVYGKSRRPKEAMEVLKQ-MESRGFPPSIVTYTSLISAYVRDGLLEE 102
G+ D Y AL+ + +P A Q + G P S++ V+ +E
Sbjct: 90 GIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDE 149
Query: 103 ALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIK 162
A ++++ P + + ++ N + A FE+++ G + L K
Sbjct: 150 ARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFK 209
Query: 163 MYGDRGMFAEMGKVFKEIKACQCSPDIVT-WNTLLAVFGQNGLDSEVSGVFKEMKRAGFV 221
G E + + P V + +L F + G +E +F M+ G+
Sbjct: 210 GLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYY 269
Query: 222 PERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKV 281
++ + L+ Y + + A +Y RM+E D +N ++ + G+ ++ +
Sbjct: 270 VDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVM 329
Query: 282 LSEMENGRCKPNEVTYSSLLHAYAN-GKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNS 340
S+M + N TY ++ +Y G + S I+ + L+
Sbjct: 330 FSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFY 389
Query: 341 KFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLP 400
K + +A + GI D T +L + + + IL+ + ++G ++ P
Sbjct: 390 KKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPP 449
Query: 401 GYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEM 460
+ L + K E +L EI K + +V A C A + +M
Sbjct: 450 VIDDLGNIEV------KVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKM 503
Query: 461 KDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLR 520
+ P +YN+ + ++ + +V + + PD +TY +V+ CK + R
Sbjct: 504 VNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDR 563
Query: 521 EEAYNFVHNLSSLDL 535
+ A+ + + L L
Sbjct: 564 DAAFAIIDAMEELGL 578
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 76/163 (46%), Gaps = 5/163 (3%)
Query: 2 LMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
L M+ +G+ P+L T+ L+ S AG + E A++LFE PD V Y+ LL
Sbjct: 817 LESMQKEGIVPNLVTYTILMKSHIEAGDI-ESAIDLFEG---TNCEPDQVMYSTLLKGLC 872
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+RP +A+ ++ +M+ G P+ +Y L+ L EA+++ M I P
Sbjct: 873 DFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSI 932
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKM 163
+T L+ KK A +F M +G CT L+KM
Sbjct: 933 NHTWLIYILCEEKKLREARALFAIMVQSGRSLLNCTKPGLLKM 975
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 4/187 (2%)
Query: 68 AMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLS 127
AMEV+ +++ + P++ + ++I+ Y G L+EA M ++ I P++ TYT L+
Sbjct: 779 AMEVIGKVK-KSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMK 837
Query: 128 GFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSP 187
+ A E A+ +FE C+P+ ++ L+K D + + E++ +P
Sbjct: 838 SHIEAGDIESAIDLFE---GTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINP 894
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVY 247
+ ++ LL + L E V K+M P LI +ARA++
Sbjct: 895 NKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALF 954
Query: 248 KRMLEAG 254
M+++G
Sbjct: 955 AIMVQSG 961
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 167/329 (50%), Gaps = 7/329 (2%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +M ++GL + TF + A ++A+ +FE +K + + T N LLD G
Sbjct: 217 VLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLG 275
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+++ KEA + +++ R F P+++TYT L++ + R L EA + N M+++ +KPD+
Sbjct: 276 RAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIV 334
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
+ +L G + ++K A+++F M++ G PN+ ++ +I+ + + + F ++
Sbjct: 335 AHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 394
Query: 181 KACQCSPDIVTWNTLLAVFG-QNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
PD + L+ FG Q LD+ V + KEM+ G P+ +T+N LI +
Sbjct: 395 VDSGLQPDAAVYTCLITGFGTQKKLDT-VYELLKEMQEKGHPPDGKTYNALIKLMANQKM 453
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM-ENGRCKPNEVTYS 298
+ A +Y +M++ + P + T+N ++ + +E V EM + G C P++ +Y+
Sbjct: 454 PEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGIC-PDDNSYT 512
Query: 299 SLLHAY-ANGKEFEKMNALAEEIYSGKIT 326
L+ GK E L E + G T
Sbjct: 513 VLIRGLIGEGKSREACRYLEEMLDKGMKT 541
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 154/328 (46%), Gaps = 2/328 (0%)
Query: 16 TFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQM 75
T N L+ L +EA LF+++K P+M+TY LL+ + + R EA + M
Sbjct: 266 TINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM 324
Query: 76 ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKD 135
+G P IV + ++ +R +A++L + M K P+V +YT ++ F
Sbjct: 325 IDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSM 384
Query: 136 ELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTL 195
E A+ F++M +G +P+ + LI +G + + ++ KE++ PD T+N L
Sbjct: 385 ETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNAL 444
Query: 196 LAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGV 255
+ + + + ++ +M + P TFN ++ +Y +++ RAV++ M++ G+
Sbjct: 445 IKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGI 504
Query: 256 TPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNA 315
PD ++Y ++ L G ++ + L EM + K + Y+ + G + E
Sbjct: 505 CPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEE 564
Query: 316 LAEEI-YSGKITTHAVLLKTLVLVNSKF 342
LA+ +SGK + + + +F
Sbjct: 565 LAQRAKFSGKFAAAEIFARWAQMTRRRF 592
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 161/365 (44%), Gaps = 8/365 (2%)
Query: 118 DVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVF 177
D TY +++S ++ E + V EEM T G + TF +K + + +F
Sbjct: 194 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIF 252
Query: 178 KEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 237
+ +K + + T N LL G+ L E +F ++K F P T+ L++ + R
Sbjct: 253 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRV 311
Query: 238 GSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTY 297
+ +A ++ M++ G+ PD+ +N +L L R + K+ M++ PN +Y
Sbjct: 312 RNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSY 371
Query: 298 SSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVL---VNSKFDFLAEAEHAFLE 354
+ ++ + E +++ + A + L+ K D + E E
Sbjct: 372 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL---LKE 428
Query: 355 FKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRN 414
+++G P D T NA++ L +K+ +I M ++ S+ +N +M + RN
Sbjct: 429 MQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARN 488
Query: 415 FRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNT 474
+ + E+++KGI PD SY ++I GK EA R L EM D ++ YN
Sbjct: 489 YEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNK 548
Query: 475 FVATY 479
F A +
Sbjct: 549 FAADF 553
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 112/218 (51%), Gaps = 7/218 (3%)
Query: 5 MKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
MKS+G P++ ++ +I C+ S+ E A+E F+++ +GL+PD Y L+ +G +
Sbjct: 359 MKSKGPCPNVRSYTIMIRDFCKQSSM-ETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQK 417
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ E+LK+M+ +G PP TY +LI + E A + N+M++ I+P ++T+
Sbjct: 418 KLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFN 477
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
++ + A+ E+ V+EEM G P+ ++ LI+ G E + +E+
Sbjct: 478 MIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDK 537
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEM-KRAGF 220
++ +N A F + G +F+E+ +RA F
Sbjct: 538 GMKTPLIDYNKFAADFHRGGQPE----IFEELAQRAKF 571
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 108/219 (49%), Gaps = 8/219 (3%)
Query: 296 TYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHA---F 352
TY+S++ A ++FE M ++ EE+ + + T ++T + F E + A F
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLT----METFTIAMKAFAAAKERKKAVGIF 252
Query: 353 LEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRT 412
KK + T+N +L GR KL K ++L + FT ++ Y L+ R
Sbjct: 253 ELMKKYKFKIGVETINCLLDSLGRAKL-GKEAQVLFDKLKERFTPNMMTYTVLLNGWCRV 311
Query: 413 RNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTY 472
RN ++ I +++++G++PD++++N+++ R+ K ++A ++ + MK P P+V +Y
Sbjct: 312 RNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSY 371
Query: 473 NTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
+ + S AI M+ G +PD Y ++
Sbjct: 372 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 410
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 149/331 (45%), Gaps = 16/331 (4%)
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVY 247
D T+N+++++ + + V +EM G + ETF + A++ +A ++
Sbjct: 194 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIF 252
Query: 248 KRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG 307
+ M + + T N +L +L R L ++++ + +++ R PN +TY+ LL+ +
Sbjct: 253 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCRV 311
Query: 308 KEFEK----MNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
+ + N + ++ I H V+L+ L+ K D A F K +G +
Sbjct: 312 RNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSD----AIKLFHVMKSKGPCPN 367
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILR 423
+ + M+ + ++ + + M +SG Y L+ + +L+
Sbjct: 368 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 427
Query: 424 EILEKGIEPDLISYNIVIYAYCRNGKMTE-AKRILNEMKDPAPVPDVVTYNTFVATY--A 480
E+ EKG PD +YN +I N KM E A RI N+M P + T+N + +Y A
Sbjct: 428 EMQEKGHPPDGKTYNALIKLMA-NQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMA 486
Query: 481 ANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
N G A V + MIK+G PD N+Y ++
Sbjct: 487 RNYEMGRA--VWEEMIKKGICPDDNSYTVLI 515
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 129/302 (42%), Gaps = 8/302 (2%)
Query: 216 KRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLW 275
+R GF + T+N+++S ++ F+ +V + M G+ + T+ + A A
Sbjct: 187 ERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKER 245
Query: 276 EQSEKVLSEMENGRCKPNEVTYSSLLHAYAN---GKEFEKMNALAEEIYSGKITTHAVLL 332
+++ + M+ + K T + LL + GKE + + +E ++ + T+ VLL
Sbjct: 246 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLL 305
Query: 333 KTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYE 392
V + L EA + + +G+ DI N ML R + + K+ M
Sbjct: 306 NGWCRVRN----LIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKS 361
Query: 393 SGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTE 452
G ++ Y ++ + + + ++++ G++PD Y +I + K+
Sbjct: 362 KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT 421
Query: 453 AKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
+L EM++ PD TYN + A M A + MI+ +P +T+N I+
Sbjct: 422 VYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMK 481
Query: 513 WY 514
Y
Sbjct: 482 SY 483
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 122/285 (42%), Gaps = 45/285 (15%)
Query: 290 CKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVL------LKTLVLVNSKFD 343
C +E T S + + N +E E++ + +E+++ AVL L ++V
Sbjct: 111 CDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLER 170
Query: 344 FLAEAEHAFLEF----KKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESG----- 394
F + AF F +++G HD T N+M+S+ + + +L+ M G
Sbjct: 171 FRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME 230
Query: 395 -FTLSLPGY----------------------------NSLMYLHSRTRNFRKSEMILREI 425
FT+++ + N L+ R + ++++++ ++
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 290
Query: 426 LEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMF 485
E+ P++++Y +++ +CR + EA RI N+M D PD+V +N + +
Sbjct: 291 KER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKK 349
Query: 486 GEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
+AI + M +G P+ +Y ++ +CK E A + ++
Sbjct: 350 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 394
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 4/145 (2%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +M+ +G PD T+N LI + E A ++ ++ + P + T+N ++ Y
Sbjct: 425 LLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYF 484
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+R + V ++M +G P +YT LI + +G EA +M++K +K +
Sbjct: 485 MARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLI 544
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEM 145
Y + F + E +FEE+
Sbjct: 545 DYNKFAADFHRGGQPE----IFEEL 565
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 196/432 (45%), Gaps = 18/432 (4%)
Query: 44 GLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEA 103
G+ D + L++ YGK+ +E++++ ++M+ G +I +Y SL +R G A
Sbjct: 180 GVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMA 239
Query: 104 LELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKM 163
N+MV + ++P +TY +L GF + + E A+R FE+M+T G P+ TFN +I
Sbjct: 240 KRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMING 299
Query: 164 YGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG--VFKEMKRAGFV 221
+ E K+F E+K + P +V++ T++ G +D G +F+EM+ +G
Sbjct: 300 FCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIK--GYLAVDRVDDGLRIFEEMRSSGIE 357
Query: 222 PERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTP-DLSTYNAVLAALARGGLWEQSEK 280
P T++TL+ G +A+ + K M+ + P D S + +L + ++ G + +
Sbjct: 358 PNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATE 417
Query: 281 VLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNS 340
VL M Y L+ + + L + + +I TL + S
Sbjct: 418 VLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQ--DTLEMEPS 475
Query: 341 KFDFL----------AEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFM 390
++ + A+AE F + KRG+ D LN ++ + ++ + +ILK M
Sbjct: 476 AYNPIIEYLCNNGQTAKAEVLFRQLMKRGV-QDQDALNNLIRGHAKEGNPDSSYEILKIM 534
Query: 391 YESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKM 450
G Y L+ + ++ L ++E G PD + VI + +G++
Sbjct: 535 SRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRV 594
Query: 451 TEAKRILNEMKD 462
A R++ M D
Sbjct: 595 QTASRVMMIMID 606
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/485 (20%), Positives = 209/485 (43%), Gaps = 32/485 (6%)
Query: 31 EEALELFEEIKLAGL-RPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTS 89
E AL+ F + +GL R D T+ ++ + G+ + A +L M +G P +
Sbjct: 131 EHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVV 190
Query: 90 LISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAG 149
LI +Y + G+++E++++ +M + ++ + +Y +L + + +A R F +M + G
Sbjct: 191 LIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEG 250
Query: 150 CKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVS 209
+P T+N ++ + + F+++K SPD T+NT++ F + E
Sbjct: 251 VEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAE 310
Query: 210 GVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAAL 269
+F EMK P ++ T+I Y D +++ M +G+ P+ +TY+ +L L
Sbjct: 311 KLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGL 370
Query: 270 ARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHA 329
G +++ +L M P + + F K+ L + +G +
Sbjct: 371 CDAGKMVEAKNILKNMMAKHIAPKDNSI------------FLKL--LVSQSKAGDMAAAT 416
Query: 330 VLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGR--KKLVAKTNKIL 387
+LK + +N AEA H + + + S Y R K L K +
Sbjct: 417 EVLKAMATLNVP----AEAGHYGVLIENQ----------CKASAYNRAIKLLDTLIEKEI 462
Query: 388 KFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRN 447
++ + YN ++ K+E++ R+++++G++ D + N +I + +
Sbjct: 463 ILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKE 521
Query: 448 GKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTY 507
G + IL M + Y + +Y + G+A + M++ G PD + +
Sbjct: 522 GNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLF 581
Query: 508 NSIVD 512
S+++
Sbjct: 582 RSVIE 586
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 134/290 (46%), Gaps = 9/290 (3%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
MK G+ + ++N+L Y A F ++ G+ P TYN +L + S R
Sbjct: 211 MKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLR 270
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+ A+ + M++RG P T+ ++I+ + R ++EA +L +M I P V +YTT
Sbjct: 271 LETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTT 330
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
++ G++ + + +R+FEEMR++G +PN T++ L+ D G E + K + A
Sbjct: 331 MIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKH 390
Query: 185 CSP-DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
+P D + LL + G + + V K M E + LI + ++++A
Sbjct: 391 IAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRA 450
Query: 244 RAVYKRMLEAGVT--------PDLSTYNAVLAALARGGLWEQSEKVLSEM 285
+ ++E + + S YN ++ L G ++E + ++
Sbjct: 451 IKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQL 500
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 176/413 (42%), Gaps = 18/413 (4%)
Query: 115 IKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMG 174
I+ D T+ ++ K A + +M G + F LI+ YG G+ E
Sbjct: 146 IRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESV 205
Query: 175 KVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAY 234
K+F+++K I ++N+L V + G F +M G P R T+N ++ +
Sbjct: 206 KIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGF 265
Query: 235 SRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNE 294
+ A ++ M G++PD +T+N ++ R +++EK+ EM+ + P+
Sbjct: 266 FLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSV 325
Query: 295 VTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLE 354
V+Y++++ Y + + EE+ S I +A TL+ + EA++
Sbjct: 326 VSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKN 385
Query: 355 FKKRGI-PHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPG----YNSLMYLH 409
+ I P D + +L + +A ++LK M TL++P Y L+
Sbjct: 386 MMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMA----TLNVPAEAGHYGVLIENQ 441
Query: 410 SRTRNFRKSEMILREILEKGI--------EPDLISYNIVIYAYCRNGKMTEAKRILNEMK 461
+ + ++ +L ++EK I E + +YN +I C NG+ +A+ + ++
Sbjct: 442 CKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLM 501
Query: 462 DPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWY 514
V D N + +A + +++ M ++G + N Y ++ Y
Sbjct: 502 KRG-VQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSY 553
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 103/239 (43%), Gaps = 39/239 (16%)
Query: 327 THAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKI 386
TH ++K L V+ L A L+ ++G+P D ++ YG+ +V ++ KI
Sbjct: 152 THMKMIKMLGEVSK----LNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKI 207
Query: 387 LKFMYESGFTLSLPGYNSLMYLHSR-------TRNFRKS--------------------- 418
+ M + G ++ YNSL + R R F K
Sbjct: 208 FQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFL 267
Query: 419 ----EMILR---EILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVT 471
E LR ++ +GI PD ++N +I +CR KM EA+++ EMK P VV+
Sbjct: 268 SLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVS 327
Query: 472 YNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
Y T + Y A + + + + M G +P+ TY++++ C EA N + N+
Sbjct: 328 YTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNM 386
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 4/179 (2%)
Query: 349 EHA--FLEFKKRG--IPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNS 404
EHA F + +R I HD T M+ + G + IL M E G +
Sbjct: 131 EHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVV 190
Query: 405 LMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPA 464
L+ + + ++S I +++ + G+E + SYN + R G+ AKR N+M
Sbjct: 191 LIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEG 250
Query: 465 PVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEA 523
P TYN + + + A+ + M +G PD T+N++++ +C+ +EA
Sbjct: 251 VEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEA 309
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 139/287 (48%), Gaps = 37/287 (12%)
Query: 1 MLMDMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L M+ + + +N +I C+ G + A LF E+ G+ PD++TY+ ++D +
Sbjct: 63 LLSKMEETHIKAHVVIYNAIIDRLCKDGH-HIHAQNLFTEMHDKGIFPDVITYSGMIDSF 121
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
+S R +A ++L+ M R P +VT+++LI+A V++G + EA E+ M+ + I P
Sbjct: 122 CRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTT 181
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TY +++ GF + A R+ + M + C P++ TF+ LI Y
Sbjct: 182 ITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGY--------------- 226
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
C V NG++ +F EM R G V T+ TLI + + G
Sbjct: 227 -----CKAKRV----------DNGME-----IFCEMHRRGIVANTVTYTTLIHGFCQVGD 266
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEME 286
D A+ + M+ +GV P+ T+ ++LA+L ++ +L +++
Sbjct: 267 LDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQ 313
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 138/294 (46%), Gaps = 4/294 (1%)
Query: 43 AGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEE 102
G RPD+VT+ L++ R +A+ ++ +M G P Y ++I+ + G E
Sbjct: 4 TGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTES 59
Query: 103 ALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIK 162
AL L ++M E HIK V Y ++ A +F EM G P++ T++ +I
Sbjct: 60 ALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMID 119
Query: 163 MYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVP 222
+ G + + ++ +++ Q +PD+VT++ L+ + G SE ++ +M R G P
Sbjct: 120 SFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFP 179
Query: 223 ERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVL 282
T+N++I + + + A+ + M +PD+ T++ ++ + + ++
Sbjct: 180 TTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIF 239
Query: 283 SEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLV 336
EM N VTY++L+H + + + L + S + + + ++++
Sbjct: 240 CEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSML 293
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 149/318 (46%), Gaps = 8/318 (2%)
Query: 5 MKSQGLAPDLCTFNTLIS--CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
M G PD+ TF TL++ CC L +AL L + + G +P Y +++ K
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVL--QALALVDRMVEEGHQP----YGTIINGLCKM 54
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
+ A+ +L +ME +V Y ++I +DG A L +M +K I PDV TY
Sbjct: 55 GDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITY 114
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
+ ++ F + + A ++ +M P++ TF+ALI G +E +++ ++
Sbjct: 115 SGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLR 174
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
P +T+N+++ F + ++ + M P+ TF+TLI+ Y + D
Sbjct: 175 RGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDN 234
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
++ M G+ + TY ++ + G + ++ +L+ M + PN +T+ S+L
Sbjct: 235 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLA 294
Query: 303 AYANGKEFEKMNALAEEI 320
+ + KE K A+ E++
Sbjct: 295 SLCSKKELRKAFAILEDL 312
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/309 (19%), Positives = 139/309 (44%), Gaps = 4/309 (1%)
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
C PD+VT+ TL+ G + + M G P + T+I+ + G + A
Sbjct: 6 CRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESAL 61
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
+ +M E + + YNA++ L + G ++ + +EM + P+ +TYS ++ ++
Sbjct: 62 NLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSF 121
Query: 305 ANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDI 364
+ L ++ +I V L+ K ++EAE + + +RGI
Sbjct: 122 CRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTT 181
Query: 365 TTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILRE 424
T N+M+ + ++ + ++L M + + +++L+ + + + I E
Sbjct: 182 ITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 241
Query: 425 ILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSM 484
+ +GI + ++Y +I+ +C+ G + A+ +LN M P+ +T+ + +A+ +
Sbjct: 242 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKE 301
Query: 485 FGEAIGVVQ 493
+A +++
Sbjct: 302 LRKAFAILE 310
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 141/318 (44%), Gaps = 39/318 (12%)
Query: 215 MKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGL 274
M G P+ TF TL++ G QA A+ RM+E G P Y ++ L + G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 275 WEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKT 334
E + +LS+ME K + V Y++++ +++ I+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAII---------DRLCKDGHHIH------------- 94
Query: 335 LVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESG 394
A++ F E +GI D+ T + M+ + R ++L+ M E
Sbjct: 95 -------------AQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQ 141
Query: 395 FTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAK 454
+ +++L+ + ++E I ++L +GI P I+YN +I +C+ ++ +AK
Sbjct: 142 INPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAK 201
Query: 455 RILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWY 514
R+L+ M + PDVVT++T + Y + + M ++G + TY +++ +
Sbjct: 202 RMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 261
Query: 515 CKLHLREEAYNFVHNLSS 532
C++ + A + ++ + S
Sbjct: 262 CQVGDLDAAQDLLNVMIS 279
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 148/294 (50%), Gaps = 9/294 (3%)
Query: 1 MLMDMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+ ++M +G PD T+ TLIS CR G + +EA +LF E+ P +VTY +L++
Sbjct: 179 IFLEMPKRGCDPDSYTYGTLISGLCRFGRI-DEAKKLFTEMVEKDCAPTVVTYTSLINGL 237
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
S+ EAM L++M+S+G P++ TY+SL+ +DG +A+EL M+ + +P++
Sbjct: 238 CGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNM 297
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TYTTL++G +K + A+ + + M G KP+ + +I + F E E
Sbjct: 298 VTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDE 357
Query: 180 IKACQCSPDIVTWNTLLAVFGQ--NGL----DSEVSGVFKEMKRAGFVPERETFNTLISA 233
+ +P+ +TWN + + GL S ++ M+ G E ET +L+
Sbjct: 358 MILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKC 417
Query: 234 YSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLA-ALARGGLWEQSEKVLSEME 286
+ G F +A + ++ G P T+ ++ L + + E S+ +L +++
Sbjct: 418 LCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTLLRDLD 471
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 143/297 (48%), Gaps = 7/297 (2%)
Query: 33 ALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEA-MEVLKQMESRGFPPSIVTYTSLI 91
A + ++ ++ GL P + + N L+ ++ +A +++ +M RG P TY +LI
Sbjct: 140 AFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLI 199
Query: 92 SAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCK 151
S R G ++EA +L +MVEK P V TYT+L++G +K + AMR EEM++ G +
Sbjct: 200 SGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIE 259
Query: 152 PNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGV 211
PN+ T+++L+ G + ++F+ + A C P++VT+ TL+ + E +
Sbjct: 260 PNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVEL 319
Query: 212 FKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAA--- 268
M G P+ + +IS + F +A M+ G+TP+ T+N +
Sbjct: 320 LDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNE 379
Query: 269 LARGGLWEQSEKVLSEMENGRCKPNEV---TYSSLLHAYANGKEFEKMNALAEEIYS 322
+ RG + + + R + V T SL+ EF+K L +EI +
Sbjct: 380 VVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVT 436
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 163/388 (42%), Gaps = 30/388 (7%)
Query: 102 EALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALI 161
++L + ++M + P Y T+L+ V + LA + ++ MR G P + + N LI
Sbjct: 104 DSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLI 163
Query: 162 KMYGDRGMFAEMG-KVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGF 220
K + G K+F E+ C PD T+ TL++ + G E +F EM
Sbjct: 164 KALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDC 223
Query: 221 VPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEK 280
P T+ +LI+ + D+A + M G+ P++ TY++++ L + G Q+ +
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME 283
Query: 281 VLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNS 340
+ M C+PN VTY++L+ ++ ++ L + + + A L ++
Sbjct: 284 LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFC 343
Query: 341 KFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLP 400
EA + E GI + T N V +N++++ G + P
Sbjct: 344 AISKFREAANFLDEMILGGITPNRLTWNIH---------VKTSNEVVR-----GLCANYP 389
Query: 401 GYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEM 460
+YL R+R GI ++ + ++ C+ G+ +A ++++E+
Sbjct: 390 SRAFTLYLSMRSR---------------GISVEVETLESLVKCLCKKGEFQKAVQLVDEI 434
Query: 461 KDPAPVPDVVTYNTFVATYAANSMFGEA 488
+P T+ + ++ GEA
Sbjct: 435 VTDGCIPSKGTWKLLIGHTLDKTIVGEA 462
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 160/385 (41%), Gaps = 50/385 (12%)
Query: 138 AMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLA 197
++RVF +M+ C P+ + ++ + + K +K ++ P + + N L+
Sbjct: 105 SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIK 164
Query: 198 VFGQNGLDSEVSG---VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAG 254
+N D V +F EM + G P+ T+ TLIS R G D+A+ ++ M+E
Sbjct: 165 ALCRN--DGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKD 222
Query: 255 VTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA-NGKEFEKM 313
P + TY +++ L +++ + L EM++ +PN TYSSL+ +G+ + M
Sbjct: 223 CAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAM 282
Query: 314 NALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSL 373
L E + + + V TL+ K + EA +G+ D L
Sbjct: 283 E-LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDA-------GL 334
Query: 374 YGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPD 433
YG K++ SGF FR++ L E++ GI P+
Sbjct: 335 YG---------KVI-----SGF--------------CAISKFREAANFLDEMILGGITPN 366
Query: 434 LISYNI-------VIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFG 486
+++NI V+ C N + A + M+ +V T + V F
Sbjct: 367 RLTWNIHVKTSNEVVRGLCANYP-SRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQ 425
Query: 487 EAIGVVQCMIKQGCKPDQNTYNSIV 511
+A+ +V ++ GC P + T+ ++
Sbjct: 426 KAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 139/321 (43%), Gaps = 17/321 (5%)
Query: 219 GFVPERETFNTLISAYSRCGSFDQARAVYKRM-LEAGVTPDLSTYNAVLAALARG-GLWE 276
G+V ++ +F ++ F A + RM +E V + +L ++ RG G
Sbjct: 46 GYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSE-----DILLSICRGYGRVH 100
Query: 277 Q---SEKVLSEMENGRCKPNEVTYSSLLHAYANGKE----FEKMNALAEEIYSGKITTHA 329
+ S +V +M++ C P++ Y ++L + F+ + E + +
Sbjct: 101 RPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLN 160
Query: 330 VLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKF 389
VL+K L + D FLE KRG D T ++S R + + K+
Sbjct: 161 VLIKALCRNDGTVD---AGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTE 217
Query: 390 MYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGK 449
M E ++ Y SL+ ++N ++ L E+ KGIEP++ +Y+ ++ C++G+
Sbjct: 218 MVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGR 277
Query: 450 MTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNS 509
+A + M P++VTY T + EA+ ++ M QG KPD Y
Sbjct: 278 SLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGK 337
Query: 510 IVDWYCKLHLREEAYNFVHNL 530
++ +C + EA NF+ +
Sbjct: 338 VISGFCAISKFREAANFLDEM 358
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 128/301 (42%), Gaps = 21/301 (6%)
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
FD A A Y G D S++ ++ L ++ +E ++ M+ C +E S
Sbjct: 36 FDSATAEYAN----GYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLS 91
Query: 300 LLHAYA-------NGKEFEKMNAL-AEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHA 351
+ Y + + F KM + +T A+L++ L N F F
Sbjct: 92 ICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQL-NLAFKF------- 143
Query: 352 FLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTN-KILKFMYESGFTLSLPGYNSLMYLHS 410
+ ++ G+P + +LN ++ R KI M + G Y +L+
Sbjct: 144 YKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLC 203
Query: 411 RTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVV 470
R +++ + E++EK P +++Y +I C + + EA R L EMK P+V
Sbjct: 204 RFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVF 263
Query: 471 TYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
TY++ + + +A+ + + M+ +GC+P+ TY +++ CK +EA + +
Sbjct: 264 TYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRM 323
Query: 531 S 531
+
Sbjct: 324 N 324
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 422 LREILEKGIEPDLISYNIVIYAYCRN-GKMTEAKRILNEMKDPAPVPDVVTYNTFVATYA 480
+REI G+ P + S N++I A CRN G + +I EM PD TY T ++
Sbjct: 147 MREI---GLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLC 203
Query: 481 ANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSS 532
EA + M+++ C P TY S+++ C +EA ++ + S
Sbjct: 204 RFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKS 255
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 112/511 (21%), Positives = 223/511 (43%), Gaps = 48/511 (9%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ DM+ QG+ P T +T +S EE + + G+ D + +LL+ Y
Sbjct: 261 LFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYC 320
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K + A V +M F +VT+ +IS YV+ GL+E+A+ + M + +K D
Sbjct: 321 KVGLIEYAEMVFDRM----FEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCV 376
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
T TL+S + +L V + +I + ++ MY G + KVF
Sbjct: 377 TLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDS- 435
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
D++ WNTLLA + ++GL E +F M+ G P T+N +I + R G
Sbjct: 436 ---TVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQV 492
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
D+A+ ++ +M +G+ P+L ++ ++ + + G E++ L +M+ +PN + +
Sbjct: 493 DEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVA 552
Query: 301 LHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI 360
L A A+ ++ G+ T H +++ L +H+ L
Sbjct: 553 LSACAH----------LASLHIGR-TIHGYIIRNL-------------QHSSL------- 581
Query: 361 PHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEM 420
++ +++ +Y + + K K+ + S LP N+++ ++ N +++
Sbjct: 582 ---VSIETSLVDMYAKCGDINKAEKV----FGSKLYSELPLSNAMISAYALYGNLKEAIA 634
Query: 421 ILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYA 480
+ R + G++PD I+ V+ A G + +A I ++ + + + +
Sbjct: 635 LYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLL 694
Query: 481 ANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
A++ GE ++ + + KPD S+V
Sbjct: 695 ASA--GETEKALRLIEEMPFKPDARMIQSLV 723
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 199/439 (45%), Gaps = 16/439 (3%)
Query: 67 EAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLL 126
+A+E+ + + S+ ++ ++ ++I R GL E AL +M+E I PD + +
Sbjct: 121 DALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVC 180
Query: 127 SGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCS 186
K V + +G + + ++L MYG G+ + KVF EI
Sbjct: 181 KACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEI------ 234
Query: 187 PD--IVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
PD V WN L+ + QNG + E +F +M++ G P R T +T +SA + G ++ +
Sbjct: 235 PDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGK 294
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
+ + G+ D ++L + GL E +E V M + + VT++ ++ Y
Sbjct: 295 QSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRM----FEKDVVTWNLIISGY 350
Query: 305 ANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDI 364
E + + + K+ V L TL+ ++ + L + + DI
Sbjct: 351 VQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDI 410
Query: 365 TTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILRE 424
+ ++ +Y + + K+ E L +N+L+ ++ + ++ +
Sbjct: 411 VLASTVMDMYAKCGSIVDAKKVFDSTVEKDLIL----WNTLLAAYAESGLSGEALRLFYG 466
Query: 425 ILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSM 484
+ +G+ P++I++N++I + RNG++ EAK + +M+ +P+++++ T + N
Sbjct: 467 MQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGC 526
Query: 485 FGEAIGVVQCMIKQGCKPD 503
EAI ++ M + G +P+
Sbjct: 527 SEEAILFLRKMQESGLRPN 545
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 152/310 (49%), Gaps = 9/310 (2%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVL 72
DL +NTL++ L EAL LF ++L G+ P+++T+N ++ ++ + EA ++
Sbjct: 440 DLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF 499
Query: 73 KQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNA 132
QM+S G P+++++T++++ V++G EEA+ +M E ++P+ ++ T LS +
Sbjct: 500 LQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHL 559
Query: 133 KKDELAMRVFEE-MRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVT 191
+ + +R + +L+ MY G + KVF + ++
Sbjct: 560 ASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVF----GSKLYSELPL 615
Query: 192 WNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRML 251
N +++ + G E +++ ++ G P+ T ++SA + G +QA ++ ++
Sbjct: 616 SNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIV 675
Query: 252 -EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEF 310
+ + P L Y ++ LA G ++EK L +E KP+ SL+ + ++
Sbjct: 676 SKRSMKPCLEHYGLMVDLLASAG---ETEKALRLIEEMPFKPDARMIQSLVASCNKQRKT 732
Query: 311 EKMNALAEEI 320
E ++ L+ ++
Sbjct: 733 ELVDYLSRKL 742
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 113/531 (21%), Positives = 209/531 (39%), Gaps = 90/531 (16%)
Query: 73 KQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVN- 131
K + + PS +Y +S+ ++G ++EAL L +M ++++ Y +L G V
Sbjct: 24 KHHDEQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYE 83
Query: 132 ----------------------------------AKKD--ELAMRVFEEMRTAGCKPNIC 155
AK D E+A +F ++R N+
Sbjct: 84 RDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVR----NVF 139
Query: 156 TFNALIKMYGDRGMF--AEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFK 213
++ A+I + G+ A MG F E+ + PD + G GV
Sbjct: 140 SWAAIIGVKCRIGLCEGALMG--FVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHG 197
Query: 214 EMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLST--YNAVLAALAR 271
+ ++G ++L Y +CG D A V+ + PD + +NA++ +
Sbjct: 198 YVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEI------PDRNAVAWNALMVGYVQ 251
Query: 272 GGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYAN-GKEFEKMNALAEEIYSGKITTHAV 330
G E++ ++ S+M +P VT S+ L A AN G E + A I +G + +
Sbjct: 252 NGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNG-MELDNI 310
Query: 331 LLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFM 390
L +L+ K + AE F R D+ T N ++S Y ++ LV + + M
Sbjct: 311 LGTSLLNFYCKVGLIEYAEMVF----DRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLM 366
Query: 391 YESGFTLSLPGYNSLMYLHSRTRNFR--------------KSEMIL-------------- 422
+LM +RT N + +S+++L
Sbjct: 367 RLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSI 426
Query: 423 ---REILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATY 479
+++ + +E DLI +N ++ AY +G EA R+ M+ P+V+T+N + +
Sbjct: 427 VDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSL 486
Query: 480 AANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
N EA + M G P+ ++ ++++ + EEA F+ +
Sbjct: 487 LRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKM 537
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 120/533 (22%), Positives = 230/533 (43%), Gaps = 57/533 (10%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M + L PD TF +L+ C + L + +++ + G D ++L+++Y K
Sbjct: 37 MLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGL 96
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
A +V ++M R +V +T++I Y R G++ EA L N+M + IKP T
Sbjct: 97 LAHARKVFEEMRER----DVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLE 152
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
+LSG + + + + F + C +I N+++ +Y + +F +++
Sbjct: 153 MLSGVLEITQLQ-CLHDFAVIYGFDC--DIAVMNSMLNLYCKCDHVGDAKDLFDQME--- 206
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
D+V+WNT+++ + G SE+ + M+ G P+++TF +S + R
Sbjct: 207 -QRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGR 265
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
++ ++++ G D+ A++ + G E S +VL + N V S L+
Sbjct: 266 MLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRL- 324
Query: 305 ANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDI 364
G+ + + +E + SG D +EA I
Sbjct: 325 --GRAEKALIVFSEMLQSGS------------------DLSSEA---------------I 349
Query: 365 TTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILRE 424
++ A + G L A + ++ G+TL P NSL+ ++++ + KS +
Sbjct: 350 ASVVASCAQLGSFDLGASVH---GYVLRHGYTLDTPALNSLITMYAKCGHLDKSLV---- 402
Query: 425 ILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSM 484
I E+ E DL+S+N +I Y +N + +A + EMK V V ++ A +S
Sbjct: 403 IFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMK-FKTVQQVDSFTVVSLLQACSSA 461
Query: 485 FGEAIG-VVQCM-IKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDL 535
+G ++ C+ I+ +P ++VD Y K E A ++S D+
Sbjct: 462 GALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDV 514
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 134/307 (43%), Gaps = 27/307 (8%)
Query: 262 YNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIY 321
+N+ + L+ G +Q S M + P+ T+ SLL A A+ + ++ +++
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 322 SGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVA 381
++ + +LV + +KF LA A F E ++R + H AM+ Y R +V
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVH----WTAMIGCYSRAGIVG 129
Query: 382 KTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVI 441
+ ++ M G PG +L+ + S + + + + G + D+ N ++
Sbjct: 130 EACSLVNEMRFQGIK---PGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSML 186
Query: 442 YAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCK 501
YC+ + +AK + ++M+ D+V++NT ++ YA+ E + ++ M G +
Sbjct: 187 NLYCKCDHVGDAKDLFDQMEQR----DMVSWNTMISGYASVGNMSEILKLLYRMRGDGLR 242
Query: 502 PDQNTYN---SIVDWYCKLHL-REEAYNFVHNLSSLDLHV------------SEEEKGRL 545
PDQ T+ S+ C L + R V +D+H+ EE R+
Sbjct: 243 PDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRV 302
Query: 546 LERIAEK 552
LE I K
Sbjct: 303 LETIPNK 309
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 98/458 (21%), Positives = 183/458 (39%), Gaps = 83/458 (18%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
D+ Q D+ ++NT+IS + E L+L ++ GLRPD T+ A L V G
Sbjct: 200 DLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMC 259
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ + Q+ GF + T+LI+ Y++ G EEA +++E DV +T
Sbjct: 260 DLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCG-KEEA---SYRVLETIPNKDVVCWT 315
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
++SG + + E A+ VF EM +G +
Sbjct: 316 VMISGLMRLGRAEKALIVFSEMLQSGSDLS------------------------------ 345
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
S I + A G L + V G + R G+ + N+LI+ Y++CG D++
Sbjct: 346 --SEAIASVVASCAQLGSFDLGASVHGY---VLRHGYTLDTPALNSLITMYAKCGHLDKS 400
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKP-NEVTYSSLLH 302
+++RM E DL ++NA+++ A+ ++ + EM+ + + T SLL
Sbjct: 401 LVIFERMNE----RDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQ 456
Query: 303 AYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPH 362
A ++ + + I +++ LV + SK +L A+ F +
Sbjct: 457 ACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK---- 512
Query: 363 DITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMIL 422
D+ + +++ YG + ++L Y+
Sbjct: 513 DVVSWGILIAGYG---------------FHGKGDIALEIYS------------------- 538
Query: 423 REILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEM 460
E L G+EP+ + + V+ + NG + + +I + M
Sbjct: 539 -EFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSM 575
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 147/338 (43%), Gaps = 16/338 (4%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L M+ GL PD TF +S E L +I G DM AL+ +Y
Sbjct: 232 LLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYL 291
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K + + + VL+ + ++ +V +T +IS +R G E+AL + ++M++
Sbjct: 292 KCGKEEASYRVLETIPNK----DVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSE 347
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
++++ +L V + G + N+LI MY G + +F+ +
Sbjct: 348 AIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERM 407
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFN--TLISAYSRCG 238
D+V+WN +++ + QN + +F+EMK V + ++F +L+ A S G
Sbjct: 408 N----ERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKT-VQQVDSFTVVSLLQACSSAG 462
Query: 239 SFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYS 298
+ + ++ ++ + + P A++ ++ G E +++ + + V++
Sbjct: 463 ALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSIS----WKDVVSWG 518
Query: 299 SLLHAYA-NGKEFEKMNALAEEIYSGKITTHAVLLKTL 335
L+ Y +GK + +E ++SG H + L L
Sbjct: 519 ILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVL 556
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 121/283 (42%), Gaps = 17/283 (6%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
D+ S+ +A + + SC + GS ++ + + G D N+L+ +Y K
Sbjct: 343 DLSSEAIA------SVVASCAQLGS-FDLGASVHGYVLRHGYTLDTPALNSLITMYAKCG 395
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKP-DVYTY 122
+++ + ++M R +V++ ++IS Y ++ L +AL L +M K ++ D +T
Sbjct: 396 HLDKSLVIFERMNER----DLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTV 451
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
+LL +A + + + + +P AL+ MY G + F I
Sbjct: 452 VSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISW 511
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
D+V+W L+A +G +G ++ E +G P F ++S+ S G Q
Sbjct: 512 ----KDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQ 567
Query: 243 ARAVYKRML-EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSE 284
++ M+ + GV P+ V+ L R E + K E
Sbjct: 568 GLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKE 610
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/370 (20%), Positives = 154/370 (41%), Gaps = 21/370 (5%)
Query: 145 MRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGL 204
+RT+ + FN+ I G ++ F + A + PD T+ +LL
Sbjct: 2 IRTSSVLNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQR 61
Query: 205 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNA 264
S + +++ GF + ++L++ Y++ G AR V++ M E D+ + A
Sbjct: 62 LSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRE----RDVVHWTA 117
Query: 265 VLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGK 324
++ +R G+ ++ +++EM KP VT LL + E ++ L +
Sbjct: 118 MIGCYSRAGIVGEACSLVNEMRFQGIKPGPVT---LLEMLSGVLEITQLQCLHDFAVIYG 174
Query: 325 ITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTN 384
++ +++ + K D + +A+ F + ++R D+ + N M+S Y V +
Sbjct: 175 FDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQR----DMVSWNTMISGYAS---VGNMS 227
Query: 385 KILKFMYE---SGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVI 441
+ILK +Y G + + + + + M+ +I++ G + D+ +I
Sbjct: 228 EILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALI 287
Query: 442 YAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCK 501
Y + GK + R+L + P DVV + ++ +A+ V M++ G
Sbjct: 288 TMYLKCGKEEASYRVLETI----PNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSD 343
Query: 502 PDQNTYNSIV 511
S+V
Sbjct: 344 LSSEAIASVV 353
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 109/511 (21%), Positives = 225/511 (44%), Gaps = 44/511 (8%)
Query: 6 KSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRP 65
+++G + N + C + + ++++E+ G ++ T+N ++ + K +
Sbjct: 175 RAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKL 234
Query: 66 KEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQM---VEKHIKPDVYTY 122
EA+ V +M G P++V++ +I + G + AL+L +M + P+ TY
Sbjct: 235 FEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTY 294
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
++++GF A + +LA R+ +M +G N T+ AL+ YG G E ++ E+ +
Sbjct: 295 NSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTS 354
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
+ V +N+++ G V ++M +R T ++ R G +
Sbjct: 355 KGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKE 414
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
A +++ E + D+ +N ++ R ++++L M + +++ +L+
Sbjct: 415 AVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLID 474
Query: 303 AYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPH 362
Y + E+ A EIY G I + LV+ NS + L+ KRG+
Sbjct: 475 GYLKEGKLER----ALEIYDGMIKMNKT--SNLVIYNSIVNGLS----------KRGMA- 517
Query: 363 DITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMIL 422
G + V +I + YN+L+ +T N +++ IL
Sbjct: 518 ------------GAAEAVVNAMEIKDIVT----------YNTLLNESLKTGNVEEADDIL 555
Query: 423 REILEKGIEPD--LISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYA 480
++ ++ E L+++NI+I C+ G +AK +L M + VPD +TY T + +++
Sbjct: 556 SKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFS 615
Query: 481 ANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
+ + + + +I QG P ++ Y SIV
Sbjct: 616 KHRSQEKVVELHDYLILQGVTPHEHIYLSIV 646
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/516 (20%), Positives = 228/516 (44%), Gaps = 48/516 (9%)
Query: 55 LLDVYGKSRRPKEAME-VLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEK 113
L+ V G+ P + +++ ++ G P + + SL+ A ++G + A E+ Q +
Sbjct: 120 LMSVEGEKLSPLHVLSGLIRSYQACGSSPDV--FDSLVRACTQNGDAQGAYEVIEQTRAE 177
Query: 114 HIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEM 173
V+ + +N + + +V++EM + G N+ TFN +I + E
Sbjct: 178 GFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEA 237
Query: 174 GKVFKEIKACQCSPDIVTWNTLLAVFGQNG---LDSEVSGVFKEMKRAGFVPERETFNTL 230
VF + C P++V++N ++ + G ++ G M P T+N++
Sbjct: 238 LSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSV 297
Query: 231 ISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRC 290
I+ + + G D A + M+++GV + TY A++ A R G +++ ++ EM +
Sbjct: 298 INGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGL 357
Query: 291 KPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKIT----THAVLLKTLVLVNSKFDFLA 346
N V Y+S+++ + E ++ ++ S + T A++++ L + ++
Sbjct: 358 VVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLC----RNGYVK 413
Query: 347 EAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLM 406
EA + ++ + DI N ++ + R K +A ++IL M G +L + +L+
Sbjct: 414 EAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLI 473
Query: 407 --YLH-----------------SRTRNFRKSEMILREILEKGIE------------PDLI 435
YL ++T N I+ + ++G+ D++
Sbjct: 474 DGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIV 533
Query: 436 SYNIVIYAYCRNGKMTEAKRILNEMK--DPAPVPDVVTYNTFVATYAANSMFGEAIGVVQ 493
+YN ++ + G + EA IL++M+ D +VT+N + + +A V++
Sbjct: 534 TYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLK 593
Query: 494 CMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHN 529
M+++G PD TY +++ + K H +E +H+
Sbjct: 594 FMVERGVVPDSITYGTLITSFSK-HRSQEKVVELHD 628
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 132/272 (48%), Gaps = 8/272 (2%)
Query: 1 MLMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L DM S+ + D T ++ CR G + +EA+E +I L D+V +N L+ +
Sbjct: 383 VLRDMNSKNMQIDRFTQAIVVRGLCRNGYV-KEAVEFQRQISEKKLVEDIVCHNTLMHHF 441
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
+ ++ A ++L M +G +++ +LI Y+++G LE ALE+ + M++ + ++
Sbjct: 442 VRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNL 501
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
Y ++++G A V M +I T+N L+ G E + +
Sbjct: 502 VIYNSIVNGLSKRGMAGAAEAVVNAMEI----KDIVTYNTLLNESLKTGNVEEADDILSK 557
Query: 180 IKA--CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 237
++ + S +VT+N ++ + G + V K M G VP+ T+ TLI+++S+
Sbjct: 558 MQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKH 617
Query: 238 GSFDQARAVYKRMLEAGVTPDLSTYNAVLAAL 269
S ++ ++ ++ GVTP Y +++ L
Sbjct: 618 RSQEKVVELHDYLILQGVTPHEHIYLSIVRPL 649
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 33/200 (16%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEI-------------------- 40
+L M QGL+ D +F TLI E ALE+++ +
Sbjct: 453 ILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLS 512
Query: 41 --KLAGLR---------PDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSI--VTY 87
+AG D+VTYN LL+ K+ +EA ++L +M+ + S+ VT+
Sbjct: 513 KRGMAGAAEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTF 572
Query: 88 TSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRT 147
+I+ + G E+A E+ MVE+ + PD TY TL++ F + E + + + +
Sbjct: 573 NIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLIL 632
Query: 148 AGCKPNICTFNALIKMYGDR 167
G P+ + ++++ DR
Sbjct: 633 QGVTPHEHIYLSIVRPLLDR 652
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 76/157 (48%), Gaps = 3/157 (1%)
Query: 385 KILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAY 444
K+ K M G+ ++ +N ++Y + ++ + +L+ G+ P+++S+N++I
Sbjct: 204 KVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGA 263
Query: 445 CRNGKMTEAKRILNEM---KDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCK 501
C+ G M A ++L +M P+ VTYN+ + + A + M+K G
Sbjct: 264 CKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVD 323
Query: 502 PDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVS 538
++ TY ++VD Y + +EA ++S L V+
Sbjct: 324 CNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVN 360
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 151/322 (46%), Gaps = 9/322 (2%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M+ L P+L FN L+S +A E+FE ++ PD TY+ LL+ +GK
Sbjct: 194 MEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR-DRFTPDSKTYSILLEGWGKEPN 252
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+A EV ++M G P IVTY+ ++ + G ++EAL + M KP + Y+
Sbjct: 253 LPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSV 312
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
L+ + + E A+ F EM +G K ++ FN+LI + + +V KE+K+
Sbjct: 313 LVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKG 372
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
+P+ + N +L + G E VF++M + P+ +T+ +I + + A
Sbjct: 373 VTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVC-EPDADTYTMVIKMFCEKKEMETAD 431
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
V+K M + GV P + T++ ++ L +++ +L EM +P+ VT+ L
Sbjct: 432 KVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLL 491
Query: 305 ANGKE-------FEKMNALAEE 319
+ EKMN L E
Sbjct: 492 IKEEREDVLKFLNEKMNVLVNE 513
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 146/318 (45%), Gaps = 5/318 (1%)
Query: 31 EEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSL 90
+EA+ F ++ L P++V +N LL KS+ ++A EV + M R F P TY+ L
Sbjct: 185 DEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSIL 243
Query: 91 ISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
+ + ++ L +A E+ +M++ PD+ TY+ ++ A + + A+ + M + C
Sbjct: 244 LEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSIC 303
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
KP ++ L+ YG E F E++ D+ +N+L+ F + V
Sbjct: 304 KPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYR 363
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
V KEMK G P ++ N ++ G D+A V+++M++ PD TY V+
Sbjct: 364 VLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFC 422
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAV 330
E ++KV M P+ T+S L++ + +K L EE+ I V
Sbjct: 423 EKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGV 482
Query: 331 L---LKTLVLVNSKFDFL 345
L+ L++ + D L
Sbjct: 483 TFGRLRQLLIKEEREDVL 500
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/432 (20%), Positives = 176/432 (40%), Gaps = 69/432 (15%)
Query: 112 EKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFA 171
++H + V Y ++ ++ +L + MR N+ TF +++ Y
Sbjct: 127 QRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKVD 185
Query: 172 EMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLI 231
E F ++ P++V +N LL+ ++ + VF+ M R F P+ +T++ L+
Sbjct: 186 EAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILL 244
Query: 232 SAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCK 291
+ + + +AR V++ M++AG PD+ TY+ ++ L + G +++ ++ M+ CK
Sbjct: 245 EGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICK 304
Query: 292 PNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHA 351
P YS L+H Y E EA
Sbjct: 305 PTTFIYSVLVHTYGTENRLE-----------------------------------EAVDT 329
Query: 352 FLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSR 411
FLE ++ G+ D+ N+++ + + + ++LK M G T P
Sbjct: 330 FLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVT---P----------- 375
Query: 412 TRNFRKSEMILREILEKG---------------IEPDLISYNIVIYAYCRNGKMTEAKRI 456
N + +ILR ++E+G EPD +Y +VI +C +M A ++
Sbjct: 376 --NSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKV 433
Query: 457 LNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
M+ P + T++ + +A +++ MI+ G +P T+ + K
Sbjct: 434 WKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIK 493
Query: 517 LHLREEAYNFVH 528
RE+ F++
Sbjct: 494 -EEREDVLKFLN 504
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/389 (20%), Positives = 170/389 (43%), Gaps = 44/389 (11%)
Query: 52 YNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMV 111
Y+ +++ K R+ K +++ M + ++ T+ ++ Y R ++EA+ N M
Sbjct: 137 YHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKYARAQKVDEAIYAFNVME 195
Query: 112 EKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFA 171
+ + P++ + LLS +K A VFE MR P+ T++ L++ +G
Sbjct: 196 KYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRF-TPDSKTYSILLEGWGKEPNLP 254
Query: 172 EMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLI 231
+ +VF+E+ C PDIVT++ ++ + + G E G+ + M + P ++ L+
Sbjct: 255 KAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLV 314
Query: 232 SAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCK 291
Y ++A + M +G+ D++ +N+++ A + + +VL EM++
Sbjct: 315 HTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVT 374
Query: 292 PNEVTYSSLL-HAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEH 350
PN + + +L H G E +
Sbjct: 375 PNSKSCNIILRHLIERG---------------------------------------EKDE 395
Query: 351 AFLEFKK--RGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYL 408
AF F+K + D T ++ ++ KK + +K+ K+M + G S+ ++ L+
Sbjct: 396 AFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLING 455
Query: 409 HSRTRNFRKSEMILREILEKGIEPDLISY 437
R +K+ ++L E++E GI P +++
Sbjct: 456 LCEERTTQKACVLLEEMIEMGIRPSGVTF 484
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 112/239 (46%), Gaps = 8/239 (3%)
Query: 297 YSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKF---DFLAEAEHAFL 353
Y ++ + A ++++ M L + K+ ++T +V K+ + EA +AF
Sbjct: 137 YHMMIESTAKIRQYKLMWDLINAMRKKKMLN----VETFCIVMRKYARAQKVDEAIYAFN 192
Query: 354 EFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTR 413
+K +P ++ N +LS + K V K ++ + M + FT Y+ L+ +
Sbjct: 193 VMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKEP 251
Query: 414 NFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYN 473
N K+ + RE+++ G PD+++Y+I++ C+ G++ EA I+ M P Y+
Sbjct: 252 NLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYS 311
Query: 474 TFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSS 532
V TY + EA+ M + G K D +NS++ +CK + + Y + + S
Sbjct: 312 VLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKS 370
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 106/228 (46%), Gaps = 3/228 (1%)
Query: 4 DMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
+M G PD+ T++ ++ C+AG + +EAL + + + +P Y+ L+ YG
Sbjct: 262 EMIDAGCHPDIVTYSIMVDILCKAGRV-DEALGIVRSMDPSICKPTTFIYSVLVHTYGTE 320
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
R +EA++ +ME G + + SLI A+ + ++ + +M K + P+ +
Sbjct: 321 NRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSC 380
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
+L + + + A VF +M C+P+ T+ +IKM+ ++ KV+K ++
Sbjct: 381 NIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRK 439
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTL 230
P + T++ L+ + + + +EM G P TF L
Sbjct: 440 KGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRL 487
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Query: 2 LMDMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
++M+ G+ D+ FN+LI C+A + + + +E+K G+ P+ + N +L
Sbjct: 330 FLEMERSGMKADVAVFNSLIGAFCKANRM-KNVYRVLKEMKSKGVTPNSKSCNIILRHLI 388
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ EA +V ++M + P TYT +I + +E A ++ M +K + P ++
Sbjct: 389 ERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMH 447
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNAL 160
T++ L++G + + A + EEM G +P+ TF L
Sbjct: 448 TFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRL 487
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 78/152 (51%), Gaps = 1/152 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +MKS+G+ P+ + N ++ +EA ++F ++ + PD TY ++ ++
Sbjct: 364 VLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFC 422
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ + + A +V K M +G PS+ T++ LI+ + ++A L +M+E I+P
Sbjct: 423 EKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGV 482
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKP 152
T+ L + +++++ + E+M +P
Sbjct: 483 TFGRLRQLLIKEEREDVLKFLNEKMNVLVNEP 514
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 165/329 (50%), Gaps = 7/329 (2%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +M ++GL + TF + A ++A+ +FE +K + + T N LLD G
Sbjct: 216 VLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLG 274
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+++ KEA + +++ R F P+++TYT L++ + R L EA + N M++ +KPD+
Sbjct: 275 RAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIV 333
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
+ +L G + + K A+++F M++ G PN+ ++ +I+ + + + F ++
Sbjct: 334 AHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 393
Query: 181 KACQCSPDIVTWNTLLAVFG-QNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
PD + L+ FG Q LD+ V + KEM+ G P+ +T+N LI +
Sbjct: 394 VDSGLQPDAAVYTCLITGFGTQKKLDT-VYELLKEMQEKGHPPDGKTYNALIKLMANQKM 452
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM-ENGRCKPNEVTYS 298
+ +Y +M++ + P + T+N ++ + +E V EM + G C P++ +Y+
Sbjct: 453 PEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGIC-PDDNSYT 511
Query: 299 SLLHAY-ANGKEFEKMNALAEEIYSGKIT 326
L+ + GK E L E + G T
Sbjct: 512 VLIRGLISEGKSREACRYLEEMLDKGMKT 540
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 149/319 (46%), Gaps = 2/319 (0%)
Query: 16 TFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQM 75
T N L+ L +EA LF+++K P+M+TY LL+ + + R EA + M
Sbjct: 265 TINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM 323
Query: 76 ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKD 135
G P IV + ++ +R +A++L + M K P+V +YT ++ F
Sbjct: 324 IDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSM 383
Query: 136 ELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTL 195
E A+ F++M +G +P+ + LI +G + + ++ KE++ PD T+N L
Sbjct: 384 ETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNAL 443
Query: 196 LAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGV 255
+ + + + ++ +M + P TFN ++ +Y +++ RAV+ M++ G+
Sbjct: 444 IKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGI 503
Query: 256 TPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNA 315
PD ++Y ++ L G ++ + L EM + K + Y+ + G + E
Sbjct: 504 CPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEE 563
Query: 316 LAEEI-YSGKITTHAVLLK 333
LA+ +SGK + +
Sbjct: 564 LAQRAKFSGKFAAAEIFAR 582
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 161/365 (44%), Gaps = 8/365 (2%)
Query: 118 DVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVF 177
D TY +++S ++ E + V EEM T G + TF +K + + +F
Sbjct: 193 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIF 251
Query: 178 KEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 237
+ +K + + T N LL G+ L E +F ++K F P T+ L++ + R
Sbjct: 252 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRV 310
Query: 238 GSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTY 297
+ +A ++ M++ G+ PD+ +N +L L R + K+ M++ PN +Y
Sbjct: 311 RNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSY 370
Query: 298 SSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVL---VNSKFDFLAEAEHAFLE 354
+ ++ + E +++ + A + L+ K D + E E
Sbjct: 371 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL---LKE 427
Query: 355 FKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRN 414
+++G P D T NA++ L +K+ +I M ++ S+ +N +M + RN
Sbjct: 428 MQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARN 487
Query: 415 FRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNT 474
+ + E+++KGI PD SY ++I GK EA R L EM D ++ YN
Sbjct: 488 YEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNK 547
Query: 475 FVATY 479
F A +
Sbjct: 548 FAADF 552
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 111/218 (50%), Gaps = 7/218 (3%)
Query: 5 MKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
MKS+G P++ ++ +I C+ S+ E A+E F+++ +GL+PD Y L+ +G +
Sbjct: 358 MKSKGPCPNVRSYTIMIRDFCKQSSM-ETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQK 416
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ E+LK+M+ +G PP TY +LI + E + N+M++ I+P ++T+
Sbjct: 417 KLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFN 476
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
++ + A+ E+ V++EM G P+ ++ LI+ G E + +E+
Sbjct: 477 MIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDK 536
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEM-KRAGF 220
++ +N A F + G +F+E+ +RA F
Sbjct: 537 GMKTPLIDYNKFAADFHRGGQPE----IFEELAQRAKF 570
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 151/332 (45%), Gaps = 41/332 (12%)
Query: 44 GLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRG------------------------ 79
G D TYN+++ + K+R+ + + VL++M ++G
Sbjct: 189 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAV 248
Query: 80 ----------FPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGF 129
F + T L+ + R L +EA L +++ E+ P++ TYT LL+G+
Sbjct: 249 GIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGW 307
Query: 130 VNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDI 189
+ A R++ +M G KP+I N +++ ++ K+F +K+ P++
Sbjct: 308 CRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNV 367
Query: 190 VTWNTLLAVF-GQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYK 248
++ ++ F Q+ +++ + F +M +G P+ + LI+ + D + K
Sbjct: 368 RSYTIMIRDFCKQSSMETAIE-YFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 426
Query: 249 RMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGK 308
M E G PD TYNA++ +A + E ++ ++M +P+ T++ ++ +Y +
Sbjct: 427 EMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVAR 486
Query: 309 EFEKMNALAEEIYSGKI----TTHAVLLKTLV 336
+E A+ +E+ I ++ VL++ L+
Sbjct: 487 NYEMGRAVWDEMIKKGICPDDNSYTVLIRGLI 518
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 107/270 (39%), Gaps = 35/270 (12%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
DM GL PD+ N ++ +A++LF +K G P++ +Y ++ + K
Sbjct: 322 DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 381
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ A+E M G P YT LI+ + L+ EL +M EK PD TY
Sbjct: 382 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 441
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
L+ N K E R++ +M +P+I TFN ++K Y + EMG+
Sbjct: 442 ALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNY-EMGR-------- 492
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
V+ EM + G P+ ++ LI G +A
Sbjct: 493 --------------------------AVWDEMIKKGICPDDNSYTVLIRGLISEGKSREA 526
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGG 273
+ ML+ G+ L YN A RGG
Sbjct: 527 CRYLEEMLDKGMKTPLIDYNKFAADFHRGG 556
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 107/219 (48%), Gaps = 8/219 (3%)
Query: 296 TYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHA---F 352
TY+S++ A ++FE M ++ EE+ + + T ++T + F E + A F
Sbjct: 196 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLT----METFTIAMKAFAAAKERKKAVGIF 251
Query: 353 LEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRT 412
KK + T+N +L GR KL K ++L + FT ++ Y L+ R
Sbjct: 252 ELMKKYKFKIGVETINCLLDSLGRAKL-GKEAQVLFDKLKERFTPNMMTYTVLLNGWCRV 310
Query: 413 RNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTY 472
RN ++ I ++++ G++PD++++N+++ R+ K ++A ++ + MK P P+V +Y
Sbjct: 311 RNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSY 370
Query: 473 NTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
+ + S AI M+ G +PD Y ++
Sbjct: 371 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 409
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 143/329 (43%), Gaps = 12/329 (3%)
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVY 247
D T+N+++++ + + V +EM G + ETF + A++ +A ++
Sbjct: 193 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIF 251
Query: 248 KRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG 307
+ M + + T N +L +L R L ++++ + +++ R PN +TY+ LL+ +
Sbjct: 252 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCRV 310
Query: 308 KEFEK----MNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
+ + N + + I H V+L+ L+ K D A F K +G +
Sbjct: 311 RNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSD----AIKLFHVMKSKGPCPN 366
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILR 423
+ + M+ + ++ + + M +SG Y L+ + +L+
Sbjct: 367 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 426
Query: 424 EILEKGIEPDLISYNIVIYAYCRNGKMTE-AKRILNEMKDPAPVPDVVTYNTFVATYAAN 482
E+ EKG PD +YN +I N KM E RI N+M P + T+N + +Y
Sbjct: 427 EMQEKGHPPDGKTYNALIKLMA-NQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVA 485
Query: 483 SMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
+ V MIK+G PD N+Y ++
Sbjct: 486 RNYEMGRAVWDEMIKKGICPDDNSYTVLI 514
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 126/302 (41%), Gaps = 8/302 (2%)
Query: 216 KRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLW 275
+R GF + T+N+++S ++ F+ +V + M G+ + T+ + A A
Sbjct: 186 ERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKER 244
Query: 276 EQSEKVLSEMENGRCKPNEVTYSSLLHAYAN---GKEFEKMNALAEEIYSGKITTHAVLL 332
+++ + M+ + K T + LL + GKE + + +E ++ + T+ VLL
Sbjct: 245 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLL 304
Query: 333 KTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYE 392
V + L EA + + G+ DI N ML R + K+ M
Sbjct: 305 NGWCRVRN----LIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKS 360
Query: 393 SGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTE 452
G ++ Y ++ + + + ++++ G++PD Y +I + K+
Sbjct: 361 KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT 420
Query: 453 AKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
+L EM++ PD TYN + A M + MI+ +P +T+N I+
Sbjct: 421 VYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMK 480
Query: 513 WY 514
Y
Sbjct: 481 SY 482
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 122/285 (42%), Gaps = 45/285 (15%)
Query: 290 CKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVL------LKTLVLVNSKFD 343
C +E T S + + N +E E++ + +E+++ AVL L ++V
Sbjct: 110 CDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLER 169
Query: 344 FLAEAEHAFLEF----KKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESG----- 394
F + AF F +++G HD T N+M+S+ + + +L+ M G
Sbjct: 170 FRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME 229
Query: 395 -FTLSLPGY----------------------------NSLMYLHSRTRNFRKSEMILREI 425
FT+++ + N L+ R + ++++++ ++
Sbjct: 230 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 289
Query: 426 LEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMF 485
E+ P++++Y +++ +CR + EA RI N+M D PD+V +N + +
Sbjct: 290 KER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKK 348
Query: 486 GEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
+AI + M +G P+ +Y ++ +CK E A + ++
Sbjct: 349 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 393
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 4/145 (2%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +M+ +G PD T+N LI + E ++ ++ + P + T+N ++ Y
Sbjct: 424 LLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYF 483
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+R + V +M +G P +YT LI + +G EA +M++K +K +
Sbjct: 484 VARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLI 543
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEM 145
Y + F + E +FEE+
Sbjct: 544 DYNKFAADFHRGGQPE----IFEEL 564
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 165/329 (50%), Gaps = 7/329 (2%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +M ++GL + TF + A ++A+ +FE +K + + T N LLD G
Sbjct: 217 VLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLG 275
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+++ KEA + +++ R F P+++TYT L++ + R L EA + N M++ +KPD+
Sbjct: 276 RAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIV 334
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
+ +L G + + K A+++F M++ G PN+ ++ +I+ + + + F ++
Sbjct: 335 AHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 394
Query: 181 KACQCSPDIVTWNTLLAVFG-QNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
PD + L+ FG Q LD+ V + KEM+ G P+ +T+N LI +
Sbjct: 395 VDSGLQPDAAVYTCLITGFGTQKKLDT-VYELLKEMQEKGHPPDGKTYNALIKLMANQKM 453
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM-ENGRCKPNEVTYS 298
+ +Y +M++ + P + T+N ++ + +E V EM + G C P++ +Y+
Sbjct: 454 PEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGIC-PDDNSYT 512
Query: 299 SLLHAY-ANGKEFEKMNALAEEIYSGKIT 326
L+ + GK E L E + G T
Sbjct: 513 VLIRGLISEGKSREACRYLEEMLDKGMKT 541
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 149/319 (46%), Gaps = 2/319 (0%)
Query: 16 TFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQM 75
T N L+ L +EA LF+++K P+M+TY LL+ + + R EA + M
Sbjct: 266 TINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM 324
Query: 76 ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKD 135
G P IV + ++ +R +A++L + M K P+V +YT ++ F
Sbjct: 325 IDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSM 384
Query: 136 ELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTL 195
E A+ F++M +G +P+ + LI +G + + ++ KE++ PD T+N L
Sbjct: 385 ETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNAL 444
Query: 196 LAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGV 255
+ + + + ++ +M + P TFN ++ +Y +++ RAV+ M++ G+
Sbjct: 445 IKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGI 504
Query: 256 TPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNA 315
PD ++Y ++ L G ++ + L EM + K + Y+ + G + E
Sbjct: 505 CPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEE 564
Query: 316 LAEEI-YSGKITTHAVLLK 333
LA+ +SGK + +
Sbjct: 565 LAQRAKFSGKFAAAEIFAR 583
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 160/362 (44%), Gaps = 8/362 (2%)
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY +++S ++ E + V EEM T G + TF +K + + +F+ +
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELM 255
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
K + + T N LL G+ L E +F ++K F P T+ L++ + R +
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNL 314
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
+A ++ M++ G+ PD+ +N +L L R + K+ M++ PN +Y+ +
Sbjct: 315 IEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIM 374
Query: 301 LHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVL---VNSKFDFLAEAEHAFLEFKK 357
+ + E +++ + A + L+ K D + E E ++
Sbjct: 375 IRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL---LKEMQE 431
Query: 358 RGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRK 417
+G P D T NA++ L +K+ +I M ++ S+ +N +M + RN+
Sbjct: 432 KGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEM 491
Query: 418 SEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVA 477
+ E+++KGI PD SY ++I GK EA R L EM D ++ YN F A
Sbjct: 492 GRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAA 551
Query: 478 TY 479
+
Sbjct: 552 DF 553
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 111/218 (50%), Gaps = 7/218 (3%)
Query: 5 MKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
MKS+G P++ ++ +I C+ S+ E A+E F+++ +GL+PD Y L+ +G +
Sbjct: 359 MKSKGPCPNVRSYTIMIRDFCKQSSM-ETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQK 417
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ E+LK+M+ +G PP TY +LI + E + N+M++ I+P ++T+
Sbjct: 418 KLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFN 477
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
++ + A+ E+ V++EM G P+ ++ LI+ G E + +E+
Sbjct: 478 MIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDK 537
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEM-KRAGF 220
++ +N A F + G +F+E+ +RA F
Sbjct: 538 GMKTPLIDYNKFAADFHRGGQPE----IFEELAQRAKF 571
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 107/270 (39%), Gaps = 35/270 (12%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
DM GL PD+ N ++ +A++LF +K G P++ +Y ++ + K
Sbjct: 323 DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 382
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ A+E M G P YT LI+ + L+ EL +M EK PD TY
Sbjct: 383 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 442
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
L+ N K E R++ +M +P+I TFN ++K Y + EMG+
Sbjct: 443 ALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNY-EMGR-------- 493
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
V+ EM + G P+ ++ LI G +A
Sbjct: 494 --------------------------AVWDEMIKKGICPDDNSYTVLIRGLISEGKSREA 527
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGG 273
+ ML+ G+ L YN A RGG
Sbjct: 528 CRYLEEMLDKGMKTPLIDYNKFAADFHRGG 557
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 149/325 (45%), Gaps = 41/325 (12%)
Query: 51 TYNALLDVYGKSRRPKEAMEVLKQMESRG------------------------------- 79
TYN+++ + K+R+ + + VL++M ++G
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMK 256
Query: 80 ---FPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDE 136
F + T L+ + R L +EA L +++ E+ P++ TYT LL+G+ +
Sbjct: 257 KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLI 315
Query: 137 LAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLL 196
A R++ +M G KP+I N +++ ++ K+F +K+ P++ ++ ++
Sbjct: 316 EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMI 375
Query: 197 AVF-GQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGV 255
F Q+ +++ + F +M +G P+ + LI+ + D + K M E G
Sbjct: 376 RDFCKQSSMETAIE-YFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH 434
Query: 256 TPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNA 315
PD TYNA++ +A + E ++ ++M +P+ T++ ++ +Y + +E A
Sbjct: 435 PPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRA 494
Query: 316 LAEEIYSGKI----TTHAVLLKTLV 336
+ +E+ I ++ VL++ L+
Sbjct: 495 VWDEMIKKGICPDDNSYTVLIRGLI 519
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 107/219 (48%), Gaps = 8/219 (3%)
Query: 296 TYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHA---F 352
TY+S++ A ++FE M ++ EE+ + + T ++T + F E + A F
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLT----METFTIAMKAFAAAKERKKAVGIF 252
Query: 353 LEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRT 412
KK + T+N +L GR KL K ++L + FT ++ Y L+ R
Sbjct: 253 ELMKKYKFKIGVETINCLLDSLGRAKL-GKEAQVLFDKLKERFTPNMMTYTVLLNGWCRV 311
Query: 413 RNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTY 472
RN ++ I ++++ G++PD++++N+++ R+ K ++A ++ + MK P P+V +Y
Sbjct: 312 RNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSY 371
Query: 473 NTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
+ + S AI M+ G +PD Y ++
Sbjct: 372 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 410
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 142/326 (43%), Gaps = 12/326 (3%)
Query: 191 TWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRM 250
T+N+++++ + + V +EM G + ETF + A++ +A +++ M
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELM 255
Query: 251 LEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEF 310
+ + T N +L +L R L ++++ + +++ R PN +TY+ LL+ + +
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLLNGWCRVRNL 314
Query: 311 EK----MNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITT 366
+ N + + I H V+L+ L+ K D A F K +G ++ +
Sbjct: 315 IEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSD----AIKLFHVMKSKGPCPNVRS 370
Query: 367 LNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREIL 426
M+ + ++ + + M +SG Y L+ + +L+E+
Sbjct: 371 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ 430
Query: 427 EKGIEPDLISYNIVIYAYCRNGKMTE-AKRILNEMKDPAPVPDVVTYNTFVATYAANSMF 485
EKG PD +YN +I N KM E RI N+M P + T+N + +Y +
Sbjct: 431 EKGHPPDGKTYNALIKLMA-NQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNY 489
Query: 486 GEAIGVVQCMIKQGCKPDQNTYNSIV 511
V MIK+G PD N+Y ++
Sbjct: 490 EMGRAVWDEMIKKGICPDDNSYTVLI 515
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 125/302 (41%), Gaps = 8/302 (2%)
Query: 216 KRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLW 275
+R GF T+N+++S ++ F+ +V + M G+ + T+ + A A
Sbjct: 187 ERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKER 245
Query: 276 EQSEKVLSEMENGRCKPNEVTYSSLLHAYAN---GKEFEKMNALAEEIYSGKITTHAVLL 332
+++ + M+ + K T + LL + GKE + + +E ++ + T+ VLL
Sbjct: 246 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLL 305
Query: 333 KTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYE 392
V + L EA + + G+ DI N ML R + K+ M
Sbjct: 306 NGWCRVRN----LIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKS 361
Query: 393 SGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTE 452
G ++ Y ++ + + + ++++ G++PD Y +I + K+
Sbjct: 362 KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT 421
Query: 453 AKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
+L EM++ PD TYN + A M + MI+ +P +T+N I+
Sbjct: 422 VYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMK 481
Query: 513 WY 514
Y
Sbjct: 482 SY 483
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 4/145 (2%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +M+ +G PD T+N LI + E ++ ++ + P + T+N ++ Y
Sbjct: 425 LLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYF 484
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+R + V +M +G P +YT LI + +G EA +M++K +K +
Sbjct: 485 VARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLI 544
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEM 145
Y + F + E +FEE+
Sbjct: 545 DYNKFAADFHRGGQPE----IFEEL 565
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 151/296 (51%), Gaps = 15/296 (5%)
Query: 16 TFNTLISC---CRAGSLYEEALELF---EEIKLAGLRPDMVTYNALLDVYGKSRRPKEAM 69
T+N ++ CR L E + EE KL L T + ++ KS + +A+
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLD----TMSKVMRRLAKSGKYNKAV 223
Query: 70 EVLKQME-SRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSG 128
+ +ME S G + SL+ A V++ +E A E+ ++ + IKPD T+ L+ G
Sbjct: 224 DAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT-IKPDARTFNILIHG 282
Query: 129 FVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPD 188
F A+K + A + + M+ P++ T+ + ++ Y G F + ++ +E++ C+P+
Sbjct: 283 FCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPN 342
Query: 189 IVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYK 248
+VT+ ++ G++ +E GV+++MK G VP+ + +++LI S+ G F A +++
Sbjct: 343 VVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFE 402
Query: 249 RMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGR---CKPNEVTYSSLL 301
M GV D+ YN +++A E + ++L ME+ C PN TY+ LL
Sbjct: 403 DMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLL 458
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 116/235 (49%), Gaps = 6/235 (2%)
Query: 2 LMD-MKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+MD MK PD+ T+ + + C+ G + E+ EE++ G P++VTY ++
Sbjct: 295 MMDLMKVTEFTPDVVTYTSFVEAYCKEGD-FRRVNEMLEEMRENGCNPNVVTYTIVMHSL 353
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
GKS++ EA+ V ++M+ G P Y+SLI + G ++A E+ M + ++ DV
Sbjct: 354 GKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDV 413
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRT---AGCKPNICTFNALIKMYGDRGMFAEMGKV 176
Y T++S ++ +DE+A+R+ + M C PN+ T+ L+KM + +G +
Sbjct: 414 LVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGIL 473
Query: 177 FKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLI 231
+ S D+ T+ L+ +G E F+E R G VP T L+
Sbjct: 474 LHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLV 528
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 130/278 (46%), Gaps = 5/278 (1%)
Query: 10 LAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEA 68
+ PD TFN LI C+A +++A + + +K+ PD+VTY + ++ Y K +
Sbjct: 269 IKPDARTFNILIHGFCKARK-FDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRV 327
Query: 69 MEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSG 128
E+L++M G P++VTYT ++ + + + EAL + +M E PD Y++L+
Sbjct: 328 NEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHI 387
Query: 129 FVNAKKDELAMRVFEEMRTAGCKPNICTFNALIK--MYGDRGMFA-EMGKVFKEIKACQC 185
+ + A +FE+M G + ++ +N +I ++ R A + K ++ + C
Sbjct: 388 LSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESC 447
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
SP++ T+ LL + + + M + + T+ LI G ++A
Sbjct: 448 SPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACL 507
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLS 283
++ + G+ P ST ++ L + + E K+ S
Sbjct: 508 FFEEAVRKGMVPRDSTCKMLVDELEKKNMAEAKLKIQS 545
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 158/360 (43%), Gaps = 8/360 (2%)
Query: 156 TFNALIKMYGDRGMFAEMGKVFKEI-KACQCSPDIVTWNTLL-AVFGQNGLDSEVSGVFK 213
T + +++ G + + F E+ K+ D + N+L+ A+ +N ++ VF
Sbjct: 205 TMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIE-HAHEVFL 263
Query: 214 EMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGG 273
++ P+ TFN LI + + FD ARA+ M TPD+ TY + + A + G
Sbjct: 264 KLFDT-IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEG 322
Query: 274 LWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLK 333
+ + ++L EM C PN VTY+ ++H+ K+ + + E++ A
Sbjct: 323 DFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYS 382
Query: 334 TLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSL---YGRKKLVAKTNKILKFM 390
+L+ + SK +A F + +G+ D+ N M+S + R ++ + K ++
Sbjct: 383 SLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDE 442
Query: 391 YESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKM 450
+ ++ Y L+ + + + ++L +++ + D+ +Y ++I C +GK+
Sbjct: 443 EGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKV 502
Query: 451 TEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSI 510
EA E VP T V +M EA +Q +++ D ++ S+
Sbjct: 503 EEACLFFEEAVRKGMVPRDSTCKMLVDELEKKNM-AEAKLKIQSLVQSKTMIDSHSPLSV 561
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 139/341 (40%), Gaps = 44/341 (12%)
Query: 176 VFKEIKACQCSPDIVTWNTLLAVFGQ--NGLDSEVSGVFKEMKRAGFVPERETFNTLISA 233
V KE+ C +VT + +L V + NG + + G+V T+N ++
Sbjct: 119 VVKELSKCDV---VVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDV 175
Query: 234 YSRCGSFDQARAVYKRML--EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGR-C 290
+C +FD + M E L T + V+ LA+ G + ++ EME
Sbjct: 176 LGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGV 235
Query: 291 KPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEH 350
K + + +SL+ A E H V LK FD
Sbjct: 236 KTDTIAMNSLMDALVKENSIEH--------------AHEVFLKL-------FD------- 267
Query: 351 AFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHS 410
I D T N ++ + + + ++ M + FT + Y S + +
Sbjct: 268 --------TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYC 319
Query: 411 RTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVV 470
+ +FR+ +L E+ E G P++++Y IV+++ ++ ++ EA + +MK+ VPD
Sbjct: 320 KEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAK 379
Query: 471 TYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
Y++ + + F +A + + M QG + D YN+++
Sbjct: 380 FYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMI 420
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 142/288 (49%), Gaps = 5/288 (1%)
Query: 1 MLMDMKSQGLAPDLC--TFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDV 58
M+ D S G DL +N +I E A F++ + +G + D TYN L+ +
Sbjct: 231 MVQDSSSHG---DLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMML 287
Query: 59 YGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPD 118
+ P +A E+ + ME TY +I + + G L+ A +L QM E+ ++P
Sbjct: 288 FLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPS 347
Query: 119 VYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFK 178
+++L+ A + + +M+V+ EM+ G +P+ F +LI Y G +++
Sbjct: 348 FSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWD 407
Query: 179 EIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 238
E+K P+ + ++ ++G VFK+M++AGF+P T++ L+ ++ G
Sbjct: 408 EMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSG 467
Query: 239 SFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEME 286
D A +Y M AG+ P LS+Y ++L LA L + + K+L EM+
Sbjct: 468 QVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMK 515
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 154/320 (48%), Gaps = 3/320 (0%)
Query: 13 DLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV 71
D T+ +I S ++G L + A +LF+++K LRP +++L+D GK+ R +M+V
Sbjct: 312 DGSTYELIIPSLAKSGRL-DAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKV 370
Query: 72 LKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVN 131
+M+ G PS + SLI +Y + G L+ AL L ++M + +P+ YT ++
Sbjct: 371 YMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAK 430
Query: 132 AKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVT 191
+ K E+AM VF++M AG P T++ L++M+ G K++ + P + +
Sbjct: 431 SGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSS 490
Query: 192 WNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRML 251
+ +LL + L + EMK G+ + + L+ Y + S D A + M
Sbjct: 491 YISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLM-IYIKDASVDLALKWLRFMG 549
Query: 252 EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE 311
+G+ + + + + GL++ + +L + + K + V Y+S+L ++ +
Sbjct: 550 SSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVRCQDED 609
Query: 312 KMNALAEEIYSGKITTHAVL 331
K L + + K HA +
Sbjct: 610 KERQLMSILSATKHKAHAFM 629
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 134/272 (49%), Gaps = 3/272 (1%)
Query: 1 MLMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+ MK + L P F++L+ S +AG L + +++++ E++ G RP + +L+D Y
Sbjct: 335 LFQQMKERKLRPSFSVFSSLVDSMGKAGRL-DTSMKVYMEMQGFGHRPSATMFVSLIDSY 393
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
K+ + A+ + +M+ GF P+ YT +I ++ + G LE A+ + M + P
Sbjct: 394 AKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTP 453
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TY+ LL + + + AM+++ M AG +P + ++ +L+ + ++ + GK+ E
Sbjct: 454 STYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLE 513
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+KA S D+ + L+ +D + + + M +G L + + G
Sbjct: 514 MKAMGYSVDVCASDVLMIYIKDASVDLALKWL-RFMGSSGIKTNNFIIRQLFESCMKNGL 572
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALAR 271
+D AR + + ++ + DL Y ++LA L R
Sbjct: 573 YDSARPLLETLVHSAGKVDLVLYTSILAHLVR 604
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 98/481 (20%), Positives = 208/481 (43%), Gaps = 10/481 (2%)
Query: 36 LFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYV 95
L + + + GL+ + +++ + +R K E+ Q++ F P++V T + V
Sbjct: 124 LDDHVMVGGLKKPYMNASSVAKIVEVVQRWKWGPELETQLDKLQFVPNMVHITQSLKI-V 182
Query: 96 RDGLLEEALEL-KNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMR-VFEEMRTAGCKPN 153
++ ++ AL L + + P Y L G +N +D + ++ +FEEM
Sbjct: 183 KE--VDAALSLFRWAKKQPWYLPSDECYVVLFDG-LNQGRDFVGIQSLFEEMVQDSSSHG 239
Query: 154 ICTFNA---LIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
+FNA +I+ FK+ + C D T+N L+ +F GL +
Sbjct: 240 DLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFE 299
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
+++ M++ + + T+ +I + ++ G D A ++++M E + P S +++++ ++
Sbjct: 300 IYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMG 359
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAV 330
+ G + S KV EM+ +P+ + SL+ +YA + + L +E+ +
Sbjct: 360 KAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFG 419
Query: 331 LLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFM 390
L ++ ++K L A F + +K G +T + +L ++ V KI M
Sbjct: 420 LYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSM 479
Query: 391 YESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKM 450
+G L Y SL+ L + R + IL E+ G D+ + ++++ Y ++ +
Sbjct: 480 TNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLM-IYIKDASV 538
Query: 451 TEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSI 510
A + L M + + N ++ A +++ ++ K D Y SI
Sbjct: 539 DLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSI 598
Query: 511 V 511
+
Sbjct: 599 L 599
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 102/231 (44%), Gaps = 9/231 (3%)
Query: 292 PNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEH- 350
P++ Y L G++F + +L EE+ ++H L + N +LA+AE
Sbjct: 203 PSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDS-SSHGDL--SFNAYNQVIQYLAKAEKL 259
Query: 351 --AFLEFKK---RGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSL 405
AF FKK G D T N ++ L+ K L K +I + M ++ L Y +
Sbjct: 260 EVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELI 319
Query: 406 MYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAP 465
+ +++ + + +++ E+ + P ++ ++ + + G++ + ++ EM+
Sbjct: 320 IPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGH 379
Query: 466 VPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
P + + + +YA A+ + M K G +P+ Y I++ + K
Sbjct: 380 RPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAK 430
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/524 (22%), Positives = 229/524 (43%), Gaps = 44/524 (8%)
Query: 5 MKSQGLAPDLCTFNTLISCCR----AGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
M S GL PD TF +++ CR ++ AL+ G D+ +L+ +Y
Sbjct: 144 MLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKF-------GFMWDVYVAASLIHLYS 196
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ + A + +M R + ++ ++IS Y + G +EAL L N + D
Sbjct: 197 RYKAVGNARILFDEMPVR----DMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSV 248
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
T +LLS A + + G + + N LI +Y + G + KVF +
Sbjct: 249 TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRM 308
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
D+++WN+++ + N +F+EM+ + P+ T +L S S+ G
Sbjct: 309 YV----RDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDI 364
Query: 241 DQARAVYKRMLEAG-VTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
R+V L G D++ NAV+ A+ GL + + V + + N + +++++
Sbjct: 365 RACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPN----TDVISWNT 420
Query: 300 LLHAYA-NG---KEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEF 355
++ YA NG + E N + EE G+I + +++ S+ L +
Sbjct: 421 IISGYAQNGFASEAIEMYNIMEEE---GEIAANQGTWVSVLPACSQAGALRQGMKLHGRL 477
Query: 356 KKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNF 415
K G+ D+ + ++ +YG+ + L Y+ S+P +N+L+ H +
Sbjct: 478 LKNGLYLDVFVVTSLADMYGK---CGRLEDALSLFYQIPRVNSVP-WNTLIACHGFHGHG 533
Query: 416 RKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMK-DPAPVPDVVTYNT 474
K+ M+ +E+L++G++PD I++ ++ A +G + E + M+ D P + Y
Sbjct: 534 EKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGC 593
Query: 475 FVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLH 518
V Y A+ ++ M Q PD + + +++ C++H
Sbjct: 594 MVDMYGRAGQLETALKFIKSMSLQ---PDASIWGALLS-ACRVH 633
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 115/237 (48%), Gaps = 21/237 (8%)
Query: 18 NTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMES 77
+ L +C +AG+L + ++L + GL D+ +L D+YGK R ++A+ + Q+
Sbjct: 456 SVLPACSQAGAL-RQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 514
Query: 78 RGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDEL 137
P + +LI+ + G E+A+ L +M+++ +KPD T+ TLLS ++ +
Sbjct: 515 VNSVP----WNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDE 570
Query: 138 AMRVFEEMRTA-GCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLL 196
FE M+T G P++ + ++ MYG G ++ K IK+ PD W LL
Sbjct: 571 GQWCFEMMQTDYGITPSLKHYGCMVDMYGRAG---QLETALKFIKSMSLQPDASIWGALL 627
Query: 197 A---VFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLIS-AYSRCGSF---DQARAV 246
+ V G L S E++ PE ++ L+S Y+ G + D+ R++
Sbjct: 628 SACRVHGNVDLGKIASEHLFEVE-----PEHVGYHVLLSNMYASAGKWEGVDEIRSI 679
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 158/394 (40%), Gaps = 55/394 (13%)
Query: 153 NICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVF 212
N+C L+ +Y G A F I+ + D+ WN +++ +G+ G SEV F
Sbjct: 85 NVCISAKLVNLYCYLGNVALARHTFDHIQ----NRDVYAWNLMISGYGRAGNSSEVIRCF 140
Query: 213 KE-MKRAGFVPERETF--------------------------------NTLISAYSRCGS 239
M +G P+ TF +LI YSR +
Sbjct: 141 SLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKA 200
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
AR ++ M D+ ++NA+++ + G +++ L+ + NG + VT S
Sbjct: 201 VGNARILFDEM----PVRDMGSWNAMISGYCQSG---NAKEALT-LSNGLRAMDSVTVVS 252
Query: 300 LLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRG 359
LL A +F + + + + + L+ + ++F L + + F R
Sbjct: 253 LLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVF----DRM 308
Query: 360 IPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSE 419
D+ + N+++ Y + + + + M S SL + S+ + R
Sbjct: 309 YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACR 368
Query: 420 MILREILEKG-IEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVAT 478
+ L KG D+ N V+ Y + G + A+ + N + P DV+++NT ++
Sbjct: 369 SVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWL----PNTDVISWNTIISG 424
Query: 479 YAANSMFGEAIGVVQCMIKQG-CKPDQNTYNSIV 511
YA N EAI + M ++G +Q T+ S++
Sbjct: 425 YAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVL 458
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLA-GLRPDMVTYNALLDVY 59
+ +M +G+ PD TF TL+S C L +E FE ++ G+ P + Y ++D+Y
Sbjct: 539 LFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMY 598
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
G++ + + A++ +K M P + +L+SA G ++ + E ++P+
Sbjct: 599 GRAGQLETALKFIKSMS---LQPDASIWGALLSACRVHGNVDLGKIASEHLFE--VEPEH 653
Query: 120 YTYTTLLS 127
Y LLS
Sbjct: 654 VGYHVLLS 661
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 119/576 (20%), Positives = 249/576 (43%), Gaps = 61/576 (10%)
Query: 5 MKSQGLA-PDLCTFNTLI-SCCRAGSLYEEALEL-FEEIKLAGLRPDMVTYNALLDVYGK 61
++ GL P+ T+N L+ + ++ S E +E +E++ G D T +L VY
Sbjct: 167 VREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCN 226
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYT 121
+ + + A+ V ++ SRG+ ++ T L+ ++ + G +++A EL + E+ I+ + T
Sbjct: 227 TGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEMLEERDIRLNYKT 285
Query: 122 YTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALI-------------------K 162
Y L+ GFV + + A ++FE+MR G +I ++ LI K
Sbjct: 286 YCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIK 345
Query: 163 MYG---DRGMFAEMGKVFKE-----------IKACQCSPDIVTWNTLLAVFGQNGLDSE- 207
G DRG+ ++ F E I ++ + +L F +N L E
Sbjct: 346 RSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEA 405
Query: 208 ---------------VSGVFKEMK--RAGFVPERETFNTLISAYSRCGSFDQARAVYKRM 250
VS + K +K +P+ ++ + +I+ + D A + +
Sbjct: 406 YSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDI 465
Query: 251 LEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEF 310
++ G+ P YN ++ + + G E+S K+L EM++ +P++ T + + A +F
Sbjct: 466 VQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDF 525
Query: 311 -EKMNALAEEIYSG--KITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTL 367
++ L + + G H L + N + +A + G +
Sbjct: 526 VGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGR---AVDACKYLDDVAGEGFLGHMVAS 582
Query: 368 NAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILE 427
A + + + V + ++ + + +G + Y+ L+ + +++++ E++
Sbjct: 583 TAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVS 642
Query: 428 KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGE 487
KG++P + +YN +I +C+ G++ + M + PDV+TY + + A+ E
Sbjct: 643 KGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSE 702
Query: 488 AIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEA 523
AI M + C P++ T+ +++ CK EA
Sbjct: 703 AIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEA 738
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 98/192 (51%)
Query: 31 EEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSL 90
+ LELF +I G PD++ Y+ L+ K+ R EA + +M S+G P++ TY S+
Sbjct: 596 DRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSM 655
Query: 91 ISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
I + ++G ++ L +M E PDV TYT+L+ G + + A+ + EM+ C
Sbjct: 656 IDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDC 715
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
PN TF ALI+ G E F+E++ + PD + +L++ F + + G
Sbjct: 716 YPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFG 775
Query: 211 VFKEMKRAGFVP 222
+F+EM G P
Sbjct: 776 IFREMVHKGRFP 787
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 110/524 (20%), Positives = 200/524 (38%), Gaps = 71/524 (13%)
Query: 5 MKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M+ G+ D+ ++ LI C+ L E AL L+ EIK +G+ PD LL + +
Sbjct: 309 MRRMGMNADIALYDVLIGGLCKHKDL-EMALSLYLEIKRSGIPPDRGILGKLLCSFSEES 367
Query: 64 RPKEAMEVL-KQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMV----------- 111
EV+ ++ + ++ Y SL ++R+ L+ EA ++
Sbjct: 368 ELSRITEVIIGDIDKKSV---MLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEI 424
Query: 112 -------EKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMY 164
K I PD + + +++ V A K ++A+ + ++ G P +N +I+
Sbjct: 425 VKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIE-- 482
Query: 165 GDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPER 224
GM E G E + EMK AG P +
Sbjct: 483 ---GMCKE------------------------------GRSEESLKLLGEMKDAGVEPSQ 509
Query: 225 ETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSE 284
T N + + F A + K+M G P + ++ L G + K L +
Sbjct: 510 FTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDD 569
Query: 285 MEN----GRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNS 340
+ G + L+ + E + + + + VL+K L
Sbjct: 570 VAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKAL----C 625
Query: 341 KFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLP 400
K EA+ F E +G+ + T N+M+ + ++ + + + MYE +
Sbjct: 626 KACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVI 685
Query: 401 GYNSLMYLHSRTRNFRKSEMILR--EILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILN 458
Y SL +H + R SE I R E+ K P+ I++ +I C+ G EA
Sbjct: 686 TYTSL--IHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFR 743
Query: 459 EMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKP 502
EM++ PD Y + V+++ ++ G+ + M+ +G P
Sbjct: 744 EMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/432 (19%), Positives = 179/432 (41%), Gaps = 33/432 (7%)
Query: 116 KPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGK 175
+ D+Y Y + S A+++ + ++ + C + F I+ G+ G+ E
Sbjct: 103 RNDMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASS 162
Query: 176 VFKEIKACQ-CSPDIVTWNTLLAVFGQNGLDSE--VSGVFKEMKRAGFVPERETFNTLIS 232
VF ++ C P+ T+N LL ++ S V KEM+ GF ++ T ++
Sbjct: 163 VFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQ 222
Query: 233 AYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKP 292
Y G ++A +V+ +L G D ++ + + G +++ +++ +E +
Sbjct: 223 VYCNTGKSERALSVFNEILSRGWL-DEHISTILVVSFCKWGQVDKAFELIEMLEERDIRL 281
Query: 293 NEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAF 352
N TY L+H + +K L E++ + L L+ K L A +
Sbjct: 282 NYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLY 341
Query: 353 LEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRT 412
LE K+ GIP D L +L + + +++ +++ +
Sbjct: 342 LEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDID-------------------- 381
Query: 413 RNFRKSEMIL-REILEKGIEPDLI--SYNIV--IYAYCRNGKMTEAKRILNEMKDPAPVP 467
+KS M+L + + E I DL+ +Y+ + + + ++E ++L + + A +P
Sbjct: 382 ---KKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKD-HNKAILP 437
Query: 468 DVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFV 527
D + + + + A+ ++ +++ G P YN+I++ CK EE+ +
Sbjct: 438 DSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLL 497
Query: 528 HNLSSLDLHVSE 539
+ + S+
Sbjct: 498 GEMKDAGVEPSQ 509
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 114/297 (38%), Gaps = 70/297 (23%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRP------------- 47
+L +MK G+ P T N + C + AL+L ++++ G P
Sbjct: 496 LLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLC 555
Query: 48 ----------------------DMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIV 85
MV A +D K+ +E+ + + + G P ++
Sbjct: 556 ENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVI 615
Query: 86 TYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEM 145
Y LI A + EA L N+MV K +KP V TY +++ G+ K+ E+
Sbjct: 616 AYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGW--CKEGEID------- 666
Query: 146 RTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLD 205
R C +++MY D +PD++T+ +L+ +G
Sbjct: 667 RGLSC---------IVRMYEDEK-----------------NPDVITYTSLIHGLCASGRP 700
Query: 206 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTY 262
SE + EMK P R TF LI +CG +A ++ M E + PD + Y
Sbjct: 701 SEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 130/600 (21%), Positives = 253/600 (42%), Gaps = 91/600 (15%)
Query: 1 MLMDMKSQGLAPDLCTFNTL--ISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDV 58
+ +++ G+ D F+++ +S L+ L + IK G D+ +L+D
Sbjct: 80 LFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHC-QCIKF-GFLDDVSVGTSLVDT 137
Query: 59 YGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPD 118
Y K K+ +V +M+ R ++VT+T+LIS Y R+ + +E L L +M + +P+
Sbjct: 138 YMKGSNFKDGRKVFDEMKER----NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPN 193
Query: 119 VYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFK 178
+T+ L ++V + G I N+LI +Y G + +F
Sbjct: 194 SFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFD 253
Query: 179 EIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMK---------------------- 216
+ + +VTWN++++ + NGLD E G+F M+
Sbjct: 254 KTEV----KSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLK 309
Query: 217 -------------RAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYN 263
+ GF+ ++ L+ AYS+C + A ++K E G ++ ++
Sbjct: 310 ELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFK---EIGCVGNVVSWT 366
Query: 264 AVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL-----------HAYANGKEFEK 312
A+++ + E++ + SEM+ +PNE TYS +L HA +E+
Sbjct: 367 AMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYER 426
Query: 313 MNAL----------------AEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFK 356
+ + A +++SG V ++ ++ A F E
Sbjct: 427 SSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELT 486
Query: 357 KRGIPHDITTLNAMLSLYGRKKL-VAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNF 415
K GI + T +++L++ + + + F +S SL ++L+ ++++ N
Sbjct: 487 KGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNI 546
Query: 416 RKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTF 475
+E E+ ++ E DL+S+N +I Y ++G+ +A + EMK D V TF
Sbjct: 547 ESAE----EVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGV---TF 599
Query: 476 VATYAANSMFG---EAIGVVQCMIKQGCK--PDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
+ +AA + G E M++ CK P + + +VD Y + E+A + N+
Sbjct: 600 IGVFAACTHAGLVEEGEKYFDIMVRD-CKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENM 658
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 185/414 (44%), Gaps = 24/414 (5%)
Query: 6 KSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRP 65
K G ++ ++ +IS EEA++LF E+K G+RP+ TY+ +L P
Sbjct: 354 KEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL-----P 408
Query: 66 K-EAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
EV Q+ + S T+L+ AYV+ G +EEA ++ + + +K D+ ++
Sbjct: 409 VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK----DIVAWSA 464
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFK--EIKA 182
+L+G+ + E A+++F E+ G KPN TF++++ + GK F IK+
Sbjct: 465 MLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKS 524
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
+ + + LL ++ + G VFK + V ++N++IS Y++ G +
Sbjct: 525 -RLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLV----SWNSMISGYAQHGQAMK 579
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM-ENGRCKPNEVTYSSLL 301
A V+K M + V D T+ V AA GL E+ EK M + + P + S ++
Sbjct: 580 ALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMV 639
Query: 302 HAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIP 361
Y+ + EK + E + + +T + V+ K + A + K P
Sbjct: 640 DLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMK----P 695
Query: 362 HDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNF 415
D + ++Y + K+ K M E PGY S + + ++T +F
Sbjct: 696 EDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKE-PGY-SWIEVKNKTYSF 747
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 114/509 (22%), Positives = 215/509 (42%), Gaps = 72/509 (14%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ M M+++G P+ TF + + L++ + GL + N+L+++Y
Sbjct: 181 LFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYL 240
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K ++A + + E + S+VT+ S+IS Y +GL EAL + M +++
Sbjct: 241 KCGNVRKARILFDKTEVK----SVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSES 296
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCK------PNICTFNALIKMYGDRGMFAEMG 174
++ +++ N K+ +R E++ + K NI T AL+ Y +
Sbjct: 297 SFASVIKLCANLKE----LRFTEQLHCSVVKYGFLFDQNIRT--ALMVAYSKCTAMLDAL 350
Query: 175 KVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNT----- 229
++FKEI C ++V+W +++ F QN E +F EMKR G P T++
Sbjct: 351 RLFKEIG---CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL 407
Query: 230 --------------------------LISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYN 263
L+ AY + G ++A V+ + + D+ ++
Sbjct: 408 PVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDD----KDIVAWS 463
Query: 264 AVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA-------NGKEFEKMNAL 316
A+LA A+ G E + K+ E+ G KPNE T+SS+L+ A GK+F A+
Sbjct: 464 AMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGF-AI 522
Query: 317 AEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGR 376
+ S + A+L + +K + AE F KR D+ + N+M+S Y +
Sbjct: 523 KSRLDSSLCVSSALLT-----MYAKKGNIESAEEVF----KRQREKDLVSWNSMISGYAQ 573
Query: 377 KKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEK-GIEPDLI 435
K + K M + + + + + + E ++ I P
Sbjct: 574 HGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKE 633
Query: 436 SYNIVIYAYCRNGKMTEAKRILNEMKDPA 464
+ ++ Y R G++ +A +++ M +PA
Sbjct: 634 HNSCMVDLYSRAGQLEKAMKVIENMPNPA 662
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 104/475 (21%), Positives = 196/475 (41%), Gaps = 80/475 (16%)
Query: 86 TYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKK-DELAMRVFE- 143
+Y SL+ + RDG +EA L + ++ D ++++L V+A DEL R
Sbjct: 60 SYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLK--VSATLCDELFGRQLHC 117
Query: 144 EMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNG 203
+ G ++ +L+ Y F + KVF E+K ++VTW TL++ + +N
Sbjct: 118 QCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK----ERNVVTWTTLISGYARNS 173
Query: 204 LDSEVSGVFKEMKRAGFVPERETF-----------------------------------N 228
++ EV +F M+ G P TF N
Sbjct: 174 MNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSN 233
Query: 229 TLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENG 288
+LI+ Y +CG+ +AR ++ + V T+N++++ A GL ++ + M
Sbjct: 234 SLINLYLKCGNVRKARILFDKTEVKSVV----TWNSMISGYAANGLDLEALGMFYSMRLN 289
Query: 289 RCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEA 348
+ +E +++S++ AN KE L + + L++ SK + +A
Sbjct: 290 YVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDA 349
Query: 349 EHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESG-----FTLS----- 398
F E G ++ + AM+S + + + + M G FT S
Sbjct: 350 LRLFKEI---GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
Query: 399 LPGYN-SLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRIL 457
LP + S ++ N+ +S + +L+ AY + GK+ EA ++
Sbjct: 407 LPVISPSEVHAQVVKTNYERSSTVGTALLD---------------AYVKLGKVEEAAKVF 451
Query: 458 NEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
+ + D D+V ++ +A YA AI + + K G KP++ T++SI++
Sbjct: 452 SGIDD----KDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILN 502
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 144/356 (40%), Gaps = 75/356 (21%)
Query: 223 ERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA------------ 270
+RE++ +L+ +SR G +A+ ++ + G+ D S +++VL A
Sbjct: 57 DRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLH 116
Query: 271 -----------------------RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG 307
+G ++ KV EM+ + N VT+++L+ YA
Sbjct: 117 CQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK----ERNVVTWTTLISGYARN 172
Query: 308 KE-------FEKMN----------------ALAEEIYSGK-ITTHAVLL-----KTLVLV 338
F +M LAEE G+ + H V++ KT+ +
Sbjct: 173 SMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVS 232
Query: 339 NSKFDF---LAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGF 395
NS + A + F K + + T N+M+S Y L + + M +
Sbjct: 233 NSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMISGYAANGLDLEALGMFYSMRLNYV 291
Query: 396 TLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKR 455
LS + S++ L + + R +E + +++ G D ++ AY + M +A R
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALR 351
Query: 456 ILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
+ E+ V +VV++ ++ + N EA+ + M ++G +P++ TY+ I+
Sbjct: 352 LFKEI---GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL 404
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 90/199 (45%), Gaps = 9/199 (4%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKL-AGLRPDMVTYNALLDVY 59
M ++ G+ P+ TF+++++ C A + + F + + L + +ALL +Y
Sbjct: 481 MFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMY 540
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
K + A EV K+ + +V++ S+IS Y + G +AL++ +M ++ +K D
Sbjct: 541 AKKGNIESAEEVFKRQREK----DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDG 596
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEM-RTAGCKPNICTFNALIKMYGDRGMFAEMGKVFK 178
T+ + + +A E + F+ M R P + ++ +Y G ++ K K
Sbjct: 597 VTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAG---QLEKAMK 653
Query: 179 EIKACQCSPDIVTWNTLLA 197
I+ W T+LA
Sbjct: 654 VIENMPNPAGSTIWRTILA 672
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 99/467 (21%), Positives = 192/467 (41%), Gaps = 36/467 (7%)
Query: 6 KSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRP 65
K +G D +N C + A +L E + G P + L+ ++ +RR
Sbjct: 150 KQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRG 209
Query: 66 KEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTL 125
V ++M+ GF P + Y ++ A V++G + AL + E + + T+ L
Sbjct: 210 LRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMIL 269
Query: 126 LSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQC 185
+ G A + E + + + MR CKP++ + A+IK G +V+ E++ +
Sbjct: 270 VKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEI 329
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
PD++ + TL+ ++G +F EMK + +RE + LI + G A
Sbjct: 330 KPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACN 389
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA 305
+++ ++++G D+ YNAV+ L +++ K+ +P+ T S ++ AY
Sbjct: 390 LWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYV 449
Query: 306 NGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDIT 365
+ + E I L + L+ + + A A F K +G
Sbjct: 450 VMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKG------ 503
Query: 366 TLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREI 425
+ +S+Y N +++ +Y+ G + +KS + E+
Sbjct: 504 --HGSVSVY---------NILMEALYKMG-------------------DIQKSLSLFYEM 533
Query: 426 LEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTY 472
+ G EPD SY+I I + G + A ++ + + VP + Y
Sbjct: 534 RKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAY 580
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/485 (20%), Positives = 195/485 (40%), Gaps = 59/485 (12%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
MK G P + +N ++ ++ AL ++E+ K GL + T+ L+ K+ R
Sbjct: 219 MKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGR 278
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+E +E+L++M P + YT++I V +G L+ +L + ++M IKPDV Y T
Sbjct: 279 IEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGT 338
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
L+ G KD R +E +F E+K Q
Sbjct: 339 LVVGLC---KDGRVERGYE--------------------------------LFMEMKGKQ 363
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
D + L+ F +G +++++ +G++ + +N +I D+A
Sbjct: 364 ILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAY 423
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM-ENGRCKPNEVT-YSSLLH 302
+++ +E + PD T + ++ A VL + E G + +T + LL
Sbjct: 424 KLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLC 483
Query: 303 AYANGKEFEKMNALAEEIY-------SGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEF 355
A E+ NA+A +++ G ++ + +L++ L K + ++ F E
Sbjct: 484 AD------EEKNAMALDVFYILKTKGHGSVSVYNILMEALY----KMGDIQKSLSLFYEM 533
Query: 356 KKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNF 415
+K G D ++ + + + K V + + E S+ Y SL +
Sbjct: 534 RKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEI 593
Query: 416 RKSEMILREIL---EKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTY 472
+++RE L E G P Y + + C+ + ++++EM + V Y
Sbjct: 594 DAVMLLVRECLGNVESG--PMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIY 651
Query: 473 NTFVA 477
++
Sbjct: 652 CAIIS 656
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 138/351 (39%), Gaps = 36/351 (10%)
Query: 4 DMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
D K GL + TF L+ C+AG + EE LE+ + ++ +PD+ Y A++
Sbjct: 253 DFKEDGLVEESTTFMILVKGLCKAGRI-EEMLEILQRMRENLCKPDVFAYTAMIKTLVSE 311
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
++ V +M P ++ Y +L+ +DG +E EL +M K I D Y
Sbjct: 312 GNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIY 371
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
L+ GFV K A ++E++ +G +I +NA+IK + K+F+
Sbjct: 372 RVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIE 431
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGF-------------VPERE---- 225
+ PD T + ++ + S+ S V + + G+ + E
Sbjct: 432 EELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAM 491
Query: 226 -----------------TFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAA 268
+N L+ A + G ++ +++ M + G PD S+Y+ +
Sbjct: 492 ALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICC 551
Query: 269 LARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEE 319
G + + ++ C P+ Y SL E + + L E
Sbjct: 552 FVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRE 602
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/415 (18%), Positives = 164/415 (39%), Gaps = 37/415 (8%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L M+ PD+ + +I + + +L +++E++ ++PD++ Y L+
Sbjct: 285 ILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLC 344
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K R + E+ +M+ + Y LI +V DG + A L +V+ D+
Sbjct: 345 KDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIG 404
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
Y ++ G + + + A ++F+ +P+ T + ++ Y ++ V + I
Sbjct: 405 IYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERI 464
Query: 181 KACQ--------------CSPD--------------------IVTWNTLLAVFGQNGLDS 206
C+ + + +N L+ + G
Sbjct: 465 GELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQ 524
Query: 207 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVL 266
+ +F EM++ GF P+ +++ I + G A + +++++E P ++ Y ++
Sbjct: 525 KSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLT 584
Query: 267 AALARGGLWEQSEKVLSE-MENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKI 325
L + G + ++ E + N P E Y+ + G EK+ + +E+ +
Sbjct: 585 KGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGV 644
Query: 326 TTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI--PHDITTLNAMLSLYGRKK 378
+ V+ ++ SK + A F E KKR + D+ ML +KK
Sbjct: 645 FINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADMVVYEEMLIEQTKKK 699
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/414 (21%), Positives = 166/414 (40%), Gaps = 44/414 (10%)
Query: 143 EEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQN 202
E M + G P+ F LI+M+ D + V++++K P + +N ++ +N
Sbjct: 182 ELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKN 241
Query: 203 GLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTY 262
G V+++ K G V E TF L+ + G ++ + +RM E PD+ Y
Sbjct: 242 GYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAY 301
Query: 263 NAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE----------- 311
A++ L G + S +V EM KP+ + Y +L+ E
Sbjct: 302 TAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKG 361
Query: 312 KMNALAEEIY---------SGKITTHAVLLKTLV---------LVNSKFDFLA---EAEH 350
K + EIY GK+ + L + LV + N+ L + +
Sbjct: 362 KQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDK 421
Query: 351 AFLEFK---KRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLS--LPGYNSL 405
A+ F+ + + D TL+ ++ Y ++ + +L+ + E G+ +S L + L
Sbjct: 422 AYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKL 481
Query: 406 MYLHSRTRNFRKSEMILR--EILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDP 463
+ + K+ M L IL+ + YNI++ A + G + ++ + EM+
Sbjct: 482 L-----CADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKL 536
Query: 464 APVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKL 517
PD +Y+ + + A + +I+ C P Y S+ C++
Sbjct: 537 GFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQI 590
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/282 (19%), Positives = 122/282 (43%), Gaps = 14/282 (4%)
Query: 252 EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKE-- 309
+ G D + YNA L R G + ++++ M++ P+E + L+ +A+ +
Sbjct: 151 QKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGL 210
Query: 310 -----FEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDI 364
+EKM + ++ + ++ LV N FD A + +FK+ G+ +
Sbjct: 211 RVYYVYEKMKKFG---FKPRVFLYNRIMDALV-KNGYFDL---ALAVYEDFKEDGLVEES 263
Query: 365 TTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILRE 424
TT ++ + + + +IL+ M E+ + Y +++ N S + E
Sbjct: 264 TTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDE 323
Query: 425 ILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSM 484
+ I+PD+++Y ++ C++G++ + EMK + D Y + + A+
Sbjct: 324 MRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGK 383
Query: 485 FGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNF 526
A + + ++ G D YN+++ C ++ ++AY
Sbjct: 384 VRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKL 425
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/183 (19%), Positives = 72/183 (39%)
Query: 358 RGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRK 417
+G P ++ ++ + + + + M + GF + YN +M + F
Sbjct: 187 QGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDL 246
Query: 418 SEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVA 477
+ + + E G+ + ++ I++ C+ G++ E IL M++ PDV Y +
Sbjct: 247 ALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIK 306
Query: 478 TYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHV 537
T + ++ V M + KPD Y ++V CK E Y + + +
Sbjct: 307 TLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILI 366
Query: 538 SEE 540
E
Sbjct: 367 DRE 369
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 121/234 (51%), Gaps = 3/234 (1%)
Query: 52 YNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMV 111
+N +L + K + E K+M++ G + +Y+ + + G +A++L +M
Sbjct: 192 HNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMK 251
Query: 112 EKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFA 171
+ +K DV Y T++ ++ E +RVF EMR GC+PN+ T N +IK+ + G
Sbjct: 252 SRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMR 311
Query: 172 EMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLI 231
+ ++ E+ C PD +T+ + +F + SE+ +F M R+G P+ +T+ L+
Sbjct: 312 DAYRMLDEMPKRGCQPDSITY---MCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLM 368
Query: 232 SAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM 285
+ R G V+K M E+G TPD + YNAV+ AL + G+ + + + EM
Sbjct: 369 RKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEM 422
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 112/221 (50%), Gaps = 5/221 (2%)
Query: 5 MKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M ++G+ DL +++ + C++G ++ A++L++E+K ++ D+V YN ++ G S+
Sbjct: 215 MDTEGVTKDLFSYSIYMDIMCKSGKPWK-AVKLYKEMKSRRMKLDVVAYNTVIRAIGASQ 273
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ + V ++M RG P++ T+ ++I DG + +A + ++M ++ +PD TY
Sbjct: 274 GVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYM 333
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
L S +K + +F M +G +P + T+ L++ + G + V+K +K
Sbjct: 334 CLFSRL---EKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKES 390
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPER 224
+PD +N ++ Q G+ +EM G P R
Sbjct: 391 GDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSPRR 431
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/378 (20%), Positives = 169/378 (44%), Gaps = 21/378 (5%)
Query: 30 YEEALELFEEI-KLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQM----ESRGFPPSI 84
+++ALE F + + +G R T+N ++D+ GK + + ++ +M ES P+
Sbjct: 61 WQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTES---VPNH 117
Query: 85 VTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEE 144
VT+ + YV L++EA++ +++ + +++ D ++ L+ K A +
Sbjct: 118 VTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLR-DETSFYNLVDALCEHKHVVEAEELCFG 176
Query: 145 MRTAG---CKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQ 201
G N N +++ + G + + + +K++ + D+ +++ + + +
Sbjct: 177 KNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCK 236
Query: 202 NGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLST 261
+G + ++KEMK + +NT+I A + V++ M E G P+++T
Sbjct: 237 SGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVAT 296
Query: 262 YNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIY 321
+N ++ L G + ++L EM C+P+ +TY L E ++ I
Sbjct: 297 HNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEI--LSLFGRMIR 354
Query: 322 SG---KITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKK 378
SG K+ T+ +L++ ++ FL + + K+ G D NA++ +K
Sbjct: 355 SGVRPKMDTYVMLMRKF----ERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKG 410
Query: 379 LVAKTNKILKFMYESGFT 396
++ + + M E G +
Sbjct: 411 MLDMAREYEEEMIERGLS 428
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 132/300 (44%), Gaps = 16/300 (5%)
Query: 216 KRAGFVPERETFNTLISAYSRCGSFDQARAVYKRML-EAGVTPDLSTYNAVLAALARGGL 274
+ +GF ETFN +I + F+ + A+ RM+ P+ T+ V L
Sbjct: 73 RESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHL 132
Query: 275 WEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGK------ITTH 328
+++ ++++ + +E ++ +L+ A K + AEE+ GK +
Sbjct: 133 VQEAIDAYDKLDDFNLR-DETSFYNLVDALCEHKHVVE----AEELCFGKNVIGNGFSVS 187
Query: 329 AVLLKTLVLVN-SKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKIL 387
+ L+L SK + + + + + G+ D+ + + + + + K K+
Sbjct: 188 NTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLY 247
Query: 388 KFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRN 447
K M L + YN+++ ++ + RE+ E+G EP++ ++N +I C +
Sbjct: 248 KEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCED 307
Query: 448 GKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTY 507
G+M +A R+L+EM PD +TY + S E + + MI+ G +P +TY
Sbjct: 308 GRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPS---EILSLFGRMIRSGVRPKMDTY 364
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 89/176 (50%), Gaps = 4/176 (2%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+MKS+ + D+ +NT+I A E + +F E++ G P++ T+N ++ + +
Sbjct: 249 EMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDG 308
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
R ++A +L +M RG P +TY L S + E L L +M+ ++P + TY
Sbjct: 309 RMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPS---EILSLFGRMIRSGVRPKMDTYV 365
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
L+ F + + V++ M+ +G P+ +NA+I +GM +M + ++E
Sbjct: 366 MLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGML-DMAREYEE 420
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/355 (19%), Positives = 139/355 (39%), Gaps = 44/355 (12%)
Query: 152 PNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVF-GQNGLDSEVSG 210
PN TF + K Y + E + ++ + +N + A+ ++ +++E
Sbjct: 115 PNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEAEELC 174
Query: 211 VFKEMKRAGF-VPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAAL 269
K + GF V + N ++ +S+ G + + + +K+M GVT DL +Y+ + +
Sbjct: 175 FGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIM 234
Query: 270 ARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY--ANGKEFEKMNALAEEIYSGKITT 327
+ G ++ K+ EM++ R K + V Y++++ A + G EF
Sbjct: 235 CKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEF----------------- 277
Query: 328 HAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKIL 387
F E ++RG ++ T N ++ L + ++L
Sbjct: 278 --------------------GIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRML 317
Query: 388 KFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRN 447
M + G P + M L SR + + ++ G+ P + +Y +++ + R
Sbjct: 318 DEMPKRG---CQPDSITYMCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERW 374
Query: 448 GKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKP 502
G + + MK+ PD YN + M A + MI++G P
Sbjct: 375 GFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 119/282 (42%), Gaps = 38/282 (13%)
Query: 252 EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM-ENGRCKPNEVTYSSLLHAYANGKEF 310
E+G T+N V+ L + +E S +++ M N PN VT+ + Y
Sbjct: 74 ESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRY------ 127
Query: 311 EKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAM 370
+T H V EA A+ + + + + N +
Sbjct: 128 --------------VTAHLV---------------QEAIDAYDKLDDFNLRDETSFYNLV 158
Query: 371 LSLYGRKKLVAKTNKIL-KFMYESGFTLS-LPGYNSLMYLHSRTRNFRKSEMILREILEK 428
+L K +V K + +GF++S +N ++ S+ + K + +++ +
Sbjct: 159 DALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTE 218
Query: 429 GIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEA 488
G+ DL SY+I + C++GK +A ++ EMK DVV YNT + A+
Sbjct: 219 GVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFG 278
Query: 489 IGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
I V + M ++GC+P+ T+N+I+ C+ +AY + +
Sbjct: 279 IRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEM 320
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 102/464 (21%), Positives = 209/464 (45%), Gaps = 55/464 (11%)
Query: 55 LLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKH 114
L+D Y R P ++ V +++ ++ + S+I A+ ++GL EALE ++ E
Sbjct: 45 LIDKYSHFREPASSLSVFRRVSP---AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESK 101
Query: 115 IKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMG 174
+ PD YT+ +++ E+ V+E++ G + ++ NAL+ MY G+
Sbjct: 102 VSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRAR 161
Query: 175 KVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAY 234
+VF E+ D+V+WN+L++ + +G E ++ E+K + VP+ T ++++ A+
Sbjct: 162 QVFDEMPV----RDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAF 217
Query: 235 SRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNE 294
Q + ++ L++GV + N ++A + + +V EM+ +
Sbjct: 218 GNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMD----VRDS 273
Query: 295 VTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLE 354
V+Y++++ Y K + + E+ FLE
Sbjct: 274 VSYNTMICGYL-----------------------------------KLEMVEESVRMFLE 298
Query: 355 FKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRN 414
+ P D+ T++++L G + ++ I +M ++GF L N L+ ++++ +
Sbjct: 299 NLDQFKP-DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGD 357
Query: 415 FRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNT 474
+ R++ D +S+N +I Y ++G + EA ++ M D +TY
Sbjct: 358 M----ITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLM 413
Query: 475 F--VATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
V+T A+ FG+ G+ IK G D + N+++D Y K
Sbjct: 414 LISVSTRLADLKFGK--GLHSNGIKSGICIDLSVSNALIDMYAK 455
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 119/537 (22%), Positives = 235/537 (43%), Gaps = 60/537 (11%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG------------ 60
DL ++N+LIS + YEEALE++ E+K + + PD T +++L +G
Sbjct: 171 DLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLH 230
Query: 61 -----------------------KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRD 97
K RRP +A V +M+ R V+Y ++I Y++
Sbjct: 231 GFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVR----DSVSYNTMICGYLKL 286
Query: 98 GLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTF 157
++EE++ + + +++ KPD+ T +++L + + LA ++ M AG
Sbjct: 287 EMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVR 345
Query: 158 NALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKR 217
N LI +Y G VF ++ C+ D V+WN++++ + Q+G E +FK M
Sbjct: 346 NILIDVYAKCGDMITARDVFNSME-CK---DTVSWNSIISGYIQSGDLMEAMKLFKMMMI 401
Query: 218 AGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQ 277
+ T+ LIS +R + ++ +++G+ DLS NA++ A+ G
Sbjct: 402 MEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGD 461
Query: 278 SEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTH-AVLLKTLV 336
S K+ S M G + VT+++++ A +F + ++ ++ A L TL
Sbjct: 462 SLKIFSSMGTG----DTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLP 517
Query: 337 LVNS-KFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGF 395
+ S L + H L + G ++ NA++ +Y + + ++++ + M
Sbjct: 518 MCASLAAKRLGKEIHCCL--LRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRR-- 573
Query: 396 TLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKR 455
+ + ++Y + K+ ++ + GI PD + + +IYA +G + E
Sbjct: 574 --DVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLA 631
Query: 456 ILNEMKDPAPV-PDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
+MK + P + Y V + + +A +Q M KPD + + S++
Sbjct: 632 CFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAM---PIKPDASIWASVL 685
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 131/626 (20%), Positives = 242/626 (38%), Gaps = 127/626 (20%)
Query: 11 APDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTY------------------ 52
A ++ +N++I L+ EALE + +++ + + PD T+
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 53 -----------------NALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYV 95
NAL+D+Y + A +V +M R +V++ SLIS Y
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR----DLVSWNSLISGYS 183
Query: 96 RDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNA----------------------- 132
G EEALE+ +++ I PD +T +++L F N
Sbjct: 184 SHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVV 243
Query: 133 ------------KKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
++ A RVF+EM + ++N +I Y M E ++F E
Sbjct: 244 VNNGLVAMYLKFRRPTDARRVFDEMDVR----DSVSYNTMICGYLKLEMVEESVRMFLE- 298
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
Q PD++T +++L G S ++ M +AGFV E N LI Y++CG
Sbjct: 299 NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDM 358
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
AR V+ M D ++N++++ + G ++ K+ M + + +TY L
Sbjct: 359 ITARDVFNSM----ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLML 414
Query: 301 LHA-------------YANG------KEFEKMNALAE------------EIYSGKITTHA 329
+ ++NG + NAL + +I+S T
Sbjct: 415 ISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDT 474
Query: 330 VLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSL---YGRKKLVAKTN-K 385
V T++ +F A + +K + D+ T L + K+L + +
Sbjct: 475 VTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCC 534
Query: 386 ILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYC 445
+L+F YES + N+L+ ++S+ S + E+ D++++ +IYAY
Sbjct: 535 LLRFGYESELQIG----NALIEMYSKCGCLENSS----RVFERMSRRDVVTWTGMIYAYG 586
Query: 446 RNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCM-IKQGCKPDQ 504
G+ +A +M+ VPD V + + + + + E + + M P
Sbjct: 587 MYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMI 646
Query: 505 NTYNSIVDWYCKLHLREEAYNFVHNL 530
Y +VD + +A F+ +
Sbjct: 647 EHYACVVDLLSRSQKISKAEEFIQAM 672
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 127/279 (45%), Gaps = 12/279 (4%)
Query: 43 AGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEE 102
+G+ D+ NAL+D+Y K +++++ M + VT+ ++ISA VR G
Sbjct: 437 SGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT----GDTVTWNTVISACVRFGDFAT 492
Query: 103 ALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIK 162
L++ QM + + PD+ T+ L + L + + G + + NALI+
Sbjct: 493 GLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIE 552
Query: 163 MYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVP 222
MY G +VF+ + D+VTW ++ +G G + F +M+++G VP
Sbjct: 553 MYSKCGCLENSSRVFERMS----RRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVP 608
Query: 223 ERETFNTLISAYSRCGSFDQARAVYKRM-LEAGVTPDLSTYNAVLAALARGGLWEQSEKV 281
+ F +I A S G D+ A +++M + P + Y V+ L+R ++E+
Sbjct: 609 DSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEF 668
Query: 282 LSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEI 320
+ M KP+ ++S+L A + E ++ I
Sbjct: 669 IQAMP---IKPDASIWASVLRACRTSGDMETAERVSRRI 704
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 100/221 (45%), Gaps = 24/221 (10%)
Query: 298 SSLLHAYANGKEFEKMNAL-------AEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEH 350
S L + +N E +++AL + + +SGK+ K+ E
Sbjct: 11 SRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLI-------------DKYSHFREPAS 57
Query: 351 AFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHS 410
+ F++ ++ N+++ + + L + + + ES + + S++ +
Sbjct: 58 SLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACA 117
Query: 411 RTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVV 470
+ +++ +IL+ G E DL N ++ Y R G +T A+++ +EM PV D+V
Sbjct: 118 GLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEM----PVRDLV 173
Query: 471 TYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
++N+ ++ Y+++ + EA+ + + PD T +S++
Sbjct: 174 SWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVL 214
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 111/484 (22%), Positives = 208/484 (42%), Gaps = 22/484 (4%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
D++ + D +NTL+ C L + + I + R D+V N LL++Y K
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+EA +V ++M R F VT+T+LIS Y + +AL NQM+ P+ +T +
Sbjct: 110 SLEEARKVFEKMPQRDF----VTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLS 165
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
+++ ++ ++ G N+ +AL+ +Y G+ + VF ++
Sbjct: 166 SVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALE-- 223
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
S + V+WN L+A + + +F+ M R GF P ++ +L A S G +Q
Sbjct: 224 --SRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG 281
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
+ V+ M+++G N +L A+ G + K+ + K + V+++SLL A
Sbjct: 282 KWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL----AKRDVVSWNSLLTA 337
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
YA ++ EE+ I + + +++ S L E H + KK GI +
Sbjct: 338 YAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPE 397
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILR 423
++ L GR N+ L+F+ E + + +L+ +N
Sbjct: 398 AWHYVTVVDLLGR---AGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAE 454
Query: 424 EILEKGIEPDLISYNIVIY-AYCRNGKMTEAKRILNEMKDPA----PVPDVVTYNTFVAT 478
+ E ++PD ++++Y Y G+ +A R+ +MK+ P V +
Sbjct: 455 HVFE--LDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHM 512
Query: 479 YAAN 482
+ AN
Sbjct: 513 FVAN 516
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 142/299 (47%), Gaps = 12/299 (4%)
Query: 228 NTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMEN 287
NTL++ Y++CGS ++AR V+++M + D T+ +++ ++ + ++M
Sbjct: 99 NTLLNMYAKCGSLEEARKVFEKMPQR----DFVTWTTLISGYSQHDRPCDALLFFNQMLR 154
Query: 288 GRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAE 347
PNE T SS++ A A + + L ++ + L+ + +++ + +
Sbjct: 155 FGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDD 214
Query: 348 AEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMY 407
A+ F + R + + NA+++ + R+ K ++ + M GF S Y SL
Sbjct: 215 AQLVFDALESR----NDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFG 270
Query: 408 LHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVP 467
S T + + + +++ G + + N ++ Y ++G + +A++I + +
Sbjct: 271 ACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKR---- 326
Query: 468 DVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNF 526
DVV++N+ + YA + EA+ + M + G +P++ ++ S++ L +E +++
Sbjct: 327 DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHY 385
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/464 (20%), Positives = 183/464 (39%), Gaps = 42/464 (9%)
Query: 80 FPPSIVTYTSL------ISAYVRDGLLEEALEL----------KNQMVEKHIKPDVYTYT 123
FPP +++ L + A V + +E+L+ N + +I D Y
Sbjct: 5 FPPRLLSQLKLSRRLNSLPAPVSEDSEDESLKFPSNDLLLRTSSNDLEGSYIPADRRFYN 64
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
TLL K V + + + +I N L+ MY G E KVF+++
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP-- 122
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSR-----CG 238
D VTW TL++ + Q+ + F +M R G+ P T +++I A + CG
Sbjct: 123 --QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCG 180
Query: 239 SFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYS 298
++ ++ G ++ +A+L R GL + ++ V +E+ N+V+++
Sbjct: 181 -----HQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES----RNDVSWN 231
Query: 299 SLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKR 358
+L+ +A EK L + + +L S FL + + K
Sbjct: 232 ALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKS 291
Query: 359 GIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKS 418
G N +L +Y + + KI + + + +NSL+ +++ +++
Sbjct: 292 GEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKR----DVVSWNSLLTAYAQHGFGKEA 347
Query: 419 EMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVAT 478
E+ GI P+ IS+ V+ A +G + E MK VP+ Y T V
Sbjct: 348 VWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDL 407
Query: 479 YAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREE 522
A+ ++ M +P + ++++ C++H E
Sbjct: 408 LGRAGDLNRALRFIEEM---PIEPTAAIWKALLN-ACRMHKNTE 447
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 129/303 (42%), Gaps = 15/303 (4%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ M G P ++ +L C + E+ + + +G + N LLD+Y
Sbjct: 249 LFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYA 308
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
KS +A ++ ++ R +V++ SL++AY + G +EA+ +M I+P+
Sbjct: 309 KSGSIHDARKIFDRLAKR----DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEI 364
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
++ ++L+ ++ + +E M+ G P + ++ + G G ++ + + I
Sbjct: 365 SFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAG---DLNRALRFI 421
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLI-SAYSRCGS 239
+ P W LL + ++E+ G + P+ + ++ + Y+ G
Sbjct: 422 EEMPIEPTAAIWKALLNACRMHK-NTEL-GAYAAEHVFELDPDDPGPHVILYNIYASGGR 479
Query: 240 FDQARAVYKRMLEAGVTPD-----LSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNE 294
++ A V K+M E+GV + + NA+ +A Q E++ + E K E
Sbjct: 480 WNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKE 539
Query: 295 VTY 297
+ Y
Sbjct: 540 LGY 542
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 126/252 (50%), Gaps = 3/252 (1%)
Query: 54 ALLDVYGKSRRPKEA---MEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQM 110
LLD K +EA +E + + PS+ + L++ + R L++A +L +M
Sbjct: 217 VLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEM 276
Query: 111 VEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMF 170
++KP V TY TL+ G+ ++ ++AM V EEM+ A + N FN +I G+ G
Sbjct: 277 KAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRL 336
Query: 171 AEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTL 230
+E + + C+ P IVT+N+L+ F + G S + K M G P T+N
Sbjct: 337 SEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHF 396
Query: 231 ISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRC 290
+S+ ++ +Y +++EAG +PD TY+ +L L G + +V EM+N
Sbjct: 397 FKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGI 456
Query: 291 KPNEVTYSSLLH 302
P+ +T + L+H
Sbjct: 457 DPDLLTTTMLIH 468
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 130/278 (46%), Gaps = 2/278 (0%)
Query: 11 APDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAME 70
P + FN L++ ++A +L+EE+K ++P +VTY L++ Y + RR + AME
Sbjct: 247 VPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAME 306
Query: 71 VLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFV 130
VL++M+ + + + +I G L EAL + + P + TY +L+ F
Sbjct: 307 VLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFC 366
Query: 131 NAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAE-MGKVFKEIKACQCSPDI 189
A A ++ + M T G P T+N K + E M FK I+A SPD
Sbjct: 367 KAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGH-SPDR 425
Query: 190 VTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKR 249
+T++ +L + ++G S V KEMK G P+ T LI R ++A +
Sbjct: 426 LTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDN 485
Query: 250 MLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMEN 287
+ G+ P T+ + L G+ + ++++ S M +
Sbjct: 486 AVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSS 523
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 139/308 (45%), Gaps = 12/308 (3%)
Query: 20 LISCCRAGSLYEEA--LELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMES 77
L + C+ G + E + LE + P + +N LL+ + +SR+ K+A ++ ++M++
Sbjct: 219 LDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKA 278
Query: 78 RGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDEL 137
P++VTY +LI Y R ++ A+E+ +M ++ + + ++ G A +
Sbjct: 279 MNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSE 338
Query: 138 AMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLA 197
A+ + E P I T+N+L+K + G K+ K + P T+N
Sbjct: 339 ALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFK 398
Query: 198 VFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTP 257
F ++ E ++ ++ AG P+R T++ ++ G A V K M G+ P
Sbjct: 399 YFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDP 458
Query: 258 DLSTYNAVLAALARGGLWEQSEKVLSEMENGRCK---PNEVTYSSLLHAYANGKEFEKMN 314
DL T ++ L R E E+ E +N + P +T+ + NG + M+
Sbjct: 459 DLLTTTMLIHLLCR---LEMLEEAFEEFDNAVRRGIIPQYITFKMI----DNGLRSKGMS 511
Query: 315 ALAEEIYS 322
+A+ + S
Sbjct: 512 DMAKRLSS 519
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 90/207 (43%), Gaps = 5/207 (2%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +MK + + FN +I EAL + E + P +VTYN+L+ +
Sbjct: 307 VLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFC 366
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K+ A ++LK M +RG P+ TY + + EE + L +++E PD
Sbjct: 367 KAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRL 426
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY +L K LAM+V +EM+ G P++ T LI + M E + F
Sbjct: 427 TYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNA 486
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSE 207
P +T+ + NGL S+
Sbjct: 487 VRRGIIPQYITFKMI-----DNGLRSK 508
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 126/310 (40%), Gaps = 38/310 (12%)
Query: 223 ERETFNTLISAYSRCGSFDQARAVYKRM---LEAGVTPDLSTYNAVLAALARGGLWEQSE 279
E L+ A + G +A +R+ +++ P + +N +L R +Q+E
Sbjct: 211 ELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAE 270
Query: 280 KVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVN 339
K+ EM+ KP VTY +L+ Y + + + EE+ ++ + ++ N
Sbjct: 271 KLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEIN------FMVFN 324
Query: 340 SKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSL 399
D L EA L+ L + R F+ ESG T+
Sbjct: 325 PIIDGLGEAGR----------------LSEALGMMERF-----------FVCESGPTIV- 356
Query: 400 PGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNE 459
YNSL+ + + + IL+ ++ +G++P +YN + ++ K E + +
Sbjct: 357 -TYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFK 415
Query: 460 MKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHL 519
+ + PD +TY+ + + A+ V + M +G PD T ++ C+L +
Sbjct: 416 LIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEM 475
Query: 520 REEAYNFVHN 529
EEA+ N
Sbjct: 476 LEEAFEEFDN 485
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/453 (19%), Positives = 172/453 (37%), Gaps = 20/453 (4%)
Query: 75 MESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVN--- 131
++ G PS+ +L D L + L + +KP +L VN
Sbjct: 92 LDETGIEPSVELVHALF-----DRLSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVNSLC 146
Query: 132 -AKKDELAMR-VFEEMRTAGCKPNIC--TFNALIKMYGDRGMFAEMGKVFKEIKA----C 183
A++ E+A VF+ +R+ + TF LI+ Y GM + + F+ ++ C
Sbjct: 147 KAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVC 206
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMK---RAGFVPERETFNTLISAYSRCGSF 240
+ + ++ LL + G E S + + + +VP FN L++ + R
Sbjct: 207 KSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKL 266
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
QA +++ M V P + TY ++ R + + +VL EM+ + N + ++ +
Sbjct: 267 KQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPI 326
Query: 301 LHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI 360
+ + + E + + V +LV K L A RG+
Sbjct: 327 IDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGV 386
Query: 361 PHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEM 420
TT N + + + + + E+G + Y+ ++ + +
Sbjct: 387 DPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQ 446
Query: 421 ILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYA 480
+ +E+ +GI+PDL++ ++I+ CR + EA + +P +T+
Sbjct: 447 VNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLR 506
Query: 481 ANSMFGEAIGVVQCMIK-QGCKPDQNTYNSIVD 512
+ M A + M K NTY VD
Sbjct: 507 SKGMSDMAKRLSSLMSSLPHSKKLPNTYREAVD 539
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 71/137 (51%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M ++G+ P T+N + EE + L+ ++ AG PD +TY+ +L + + +
Sbjct: 381 MMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGK 440
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
AM+V K+M++RG P ++T T LI R +LEEA E + V + I P T+
Sbjct: 441 LSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKM 500
Query: 125 LLSGFVNAKKDELAMRV 141
+ +G + ++A R+
Sbjct: 501 IDNGLRSKGMSDMAKRL 517
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 124/277 (44%), Gaps = 15/277 (5%)
Query: 252 EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENG-RCKPNEVTYSSLLHAYANGKEF 310
E G+ P + +A+ L+ + S +EM+ G P+ + S++++ +EF
Sbjct: 94 ETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPS--LFDSVVNSLCKAREF 151
Query: 311 EKMNALAEEIYSGKITTHAVLLKTLVLVNSKF---DFLAEAEHAFLEFKKRGIP-----H 362
E +L + ++ V T +++ ++ + +A AF EF + P
Sbjct: 152 EIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAF-EFARSYEPVCKSAT 210
Query: 363 DITTLNAMLSLYGRKKLVAKTNKILKFM---YESGFTLSLPGYNSLMYLHSRTRNFRKSE 419
++ L +L ++ V + + L+ + +S + S+ +N L+ R+R +++E
Sbjct: 211 ELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAE 270
Query: 420 MILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATY 479
+ E+ ++P +++Y +I YCR ++ A +L EMK + + +N +
Sbjct: 271 KLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGL 330
Query: 480 AANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
EA+G+++ P TYNS+V +CK
Sbjct: 331 GEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCK 367
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 143/317 (45%), Gaps = 48/317 (15%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M+S+G+ PD T L+S C E +E +K GLR + NAL+D++ K
Sbjct: 248 MESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGD 307
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
EA + +E R +IV++T++IS Y R GLL+ + +L + M EK DV +
Sbjct: 308 IHEARRIFDNLEKR----TIVSWTTMISGYARCGLLDVSRKLFDDMEEK----DVVLWNA 359
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKP-------------------------------- 152
++ G V AK+ + A+ +F+EM+T+ KP
Sbjct: 360 MIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYS 419
Query: 153 ---NICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVS 209
N+ +L+ MY G +E VF I+ + + +T+ ++ +G S
Sbjct: 420 LSLNVALGTSLVDMYAKCGNISEALSVFHGIQ----TRNSLTYTAIIGGLALHGDASTAI 475
Query: 210 GVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEA-GVTPDLSTYNAVLAA 268
F EM AG P+ TF L+SA G R + +M + P L Y+ ++
Sbjct: 476 SYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDL 535
Query: 269 LARGGLWEQSEKVLSEM 285
L R GL E++++++ M
Sbjct: 536 LGRAGLLEEADRLMESM 552
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 103/516 (19%), Positives = 206/516 (39%), Gaps = 43/516 (8%)
Query: 29 LYEEALELFEEIKL----AGLRPDMVTYNALLDVYG-----------KSRRPKEAMEVLK 73
L+ L L E+ KL ++ M+ +LD + +SR ++++LK
Sbjct: 52 LHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILK 111
Query: 74 QMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHI---KPDVYTYTTLLSGFV 130
+E+ P+I ++ I + +E+ L QM+ +PD +TY L
Sbjct: 112 GIEN----PNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCA 167
Query: 131 NAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSP--D 188
+ + L + + + NA I M+ G KVF E SP D
Sbjct: 168 DLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDE------SPVRD 221
Query: 189 IVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYK 248
+V+WN L+ + + G + V+K M+ G P+ T L+S+ S G ++ + Y+
Sbjct: 222 LVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYE 281
Query: 249 RMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGK 308
+ E G+ + NA++ ++ G ++ ++ +E K V++++++ YA
Sbjct: 282 YVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLE----KRTIVSWTTMISGYARCG 337
Query: 309 EFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLN 368
+ L +++ + ++ V D LA F E + D T+
Sbjct: 338 LLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALA----LFQEMQTSNTKPDEITMI 393
Query: 369 AMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEK 428
LS + + I +++ + +L++ SL+ ++++ N ++ + I +
Sbjct: 394 HCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR 453
Query: 429 GIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEA 488
+ ++Y +I +G + A NEM D PD +T+ ++ M
Sbjct: 454 ----NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTG 509
Query: 489 IGVVQCMIKQ-GCKPDQNTYNSIVDWYCKLHLREEA 523
M + P Y+ +VD + L EEA
Sbjct: 510 RDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEA 545
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 84/197 (42%), Gaps = 8/197 (4%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ +M++ PD T +S C + + + I+ L ++ +L+D+Y
Sbjct: 376 LFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYA 435
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K EA+ V +++R + +TYT++I G A+ N+M++ I PD
Sbjct: 436 KCGNISEALSVFHGIQTR----NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEI 491
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTA-GCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
T+ LLS + + F +M++ P + ++ ++ + G G+ E ++ +
Sbjct: 492 TFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMES 551
Query: 180 IKACQCSPDIVTWNTLL 196
+ D W LL
Sbjct: 552 MPM---EADAAVWGALL 565
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 148/304 (48%), Gaps = 8/304 (2%)
Query: 10 LAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAM 69
L PDL +N +++ C ++ +F E++ GLRP+ TY ++V +S +
Sbjct: 337 LEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVH 396
Query: 70 EVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGF 129
+ ++M+S G P +TY L+ A R+G +EEA+E M +K + Y L
Sbjct: 397 DFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCL 456
Query: 130 VNAKKDELAMRVFEEM-RTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPD 188
N + AM M R C+P TF LI + G + +F+ +K +C P+
Sbjct: 457 CNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQYMKD-KCDPN 515
Query: 189 IVTWNTLLAVFGQNGLDSEVSGVFKEM---KRAGFVPERETFNTLISAYSRCGSFDQARA 245
I T N +L V+G+N + SE +F+E+ K VP T++ ++ A +R ++
Sbjct: 516 IGTANMMLKVYGRNDMFSEAKELFEEIVSRKETHLVPNEYTYSFMLEASARSLQWEYFEH 575
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSE-MENGRCKPNEVTYSSLL-HA 303
VY+ M+ +G D + + ++L +R G W E +E+G P+ + ++ LL HA
Sbjct: 576 VYQTMVLSGYQMDQTKHASMLIEASRAGKWSLLEHAFDAVLEDGEI-PHPLFFTELLCHA 634
Query: 304 YANG 307
A G
Sbjct: 635 TAKG 638
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 163/389 (41%), Gaps = 66/389 (16%)
Query: 36 LFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQM-ESRGFPPSIVTYTSLISAY 94
++ + K LR V Y LL V G +RRP+EA+++ QM R P + Y +
Sbjct: 243 VYSDKKRKHLRSRFV-YTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTL 301
Query: 95 VRDGLLEEALELKNQMVEKHIK---------------PDVYTYTTLLSGFVNAKKDELAM 139
+ GLL+E L++ +M +K K PD+ Y +L+ V + +
Sbjct: 302 GQAGLLKELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVS 361
Query: 140 RVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVF 199
VF E+R G +PN T+ +++ + G F + F+++K+ +P +T+ L+
Sbjct: 362 WVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRAL 421
Query: 200 GQNGLDSEVSGVFKEMKRAGFV------------------------------------PE 223
+ G E ++M++ G + P
Sbjct: 422 WREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPL 481
Query: 224 RETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLS 283
TF LI+A G D A+++ M + P++ T N +L R ++ +++++
Sbjct: 482 EITFTGLIAASLNGGHVDDCMAIFQYMKDK-CDPNIGTANMMLKVYGRNDMFSEAKELFE 540
Query: 284 EM---ENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEI----YSGKITTHAVLLKTLV 336
E+ + PNE TYS +L A A ++E + + + Y T HA +L
Sbjct: 541 EIVSRKETHLVPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHASML---- 596
Query: 337 LVNSKFDFLAEAEHAFLEFKKRG-IPHDI 364
+ S+ + EHAF + G IPH +
Sbjct: 597 IEASRAGKWSLLEHAFDAVLEDGEIPHPL 625
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/403 (20%), Positives = 149/403 (36%), Gaps = 93/403 (23%)
Query: 113 KHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAE 172
KH++ + YT LLS A++ + A+++F +M GDR ++
Sbjct: 250 KHLRSR-FVYTKLLSVLGFARRPQEALQIFNQM------------------LGDRQLY-- 288
Query: 173 MGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLIS 232
PD+ ++ + GQ GL E+ V + M++ P + T N
Sbjct: 289 --------------PDMAAYHCIAVTLGQAGLLKELLKVIERMRQK---PTKLTKNL--- 328
Query: 233 AYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKP 292
R ++D + PDL YNA+L A W+ V E+ +P
Sbjct: 329 ---RQKNWDPV-----------LEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRP 374
Query: 293 NEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAF 352
N TY + +F++++ ++ S A+ K LV + + EA A
Sbjct: 375 NGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAV 434
Query: 353 LEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRT 412
+ +++G+ I T + L + + M E G R
Sbjct: 435 RDMEQKGV---IGTGSVYYELAC---CLCNNGRWCDAMLEVGRM-------------KRL 475
Query: 413 RNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTY 472
N R P I++ +I A G + + I MKD P++ T
Sbjct: 476 ENCR---------------PLEITFTGLIAASLNGGHVDDCMAIFQYMKDKCD-PNIGTA 519
Query: 473 NTFVATYAANSMFGEAIGVVQCMIKQG---CKPDQNTYNSIVD 512
N + Y N MF EA + + ++ + P++ TY+ +++
Sbjct: 520 NMMLKVYGRNDMFSEAKELFEEIVSRKETHLVPNEYTYSFMLE 562
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/507 (21%), Positives = 220/507 (43%), Gaps = 61/507 (12%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV 71
P+L +NT+ S AL+L+ + GL P+ T+ +L KS+ KE ++
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 72 LKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVN 131
+ G + +TSLIS YV++G LE+A +++ +K DV +YT L+ G+ +
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDA----HKVFDKSPHRDVVSYTALIKGYAS 212
Query: 132 AKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVT 191
E A ++F+E+ ++ ++NA+I Y + G + E ++FK++ PD T
Sbjct: 213 RGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDEST 268
Query: 192 WNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRML 251
T+++ Q+G V + GF + N LI YS+CG + A +++R+
Sbjct: 269 MVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERL- 327
Query: 252 EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE 311
D+ ++N ++ L++++ + EM PN+VT S+L A A
Sbjct: 328 ---PYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACA------ 378
Query: 312 KMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAML 371
+ G I + H +++ + +G+ + + +++
Sbjct: 379 ---------HLGAID------------------IGRWIHVYIDKRLKGVTNASSLRTSLI 411
Query: 372 SLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIE 431
+Y + + +++ + S SL +N++++ + S + + + GI+
Sbjct: 412 DMYAKCGDIEAAHQV----FNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQ 467
Query: 432 PDLISYNIVIYAYCRNGKMTEAKRILNEM-KDPAPVPDVVTYNTFVATYAANSMFGEAI- 489
PD I++ ++ A +G + + I M +D P + Y + + +F EA
Sbjct: 468 PDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEE 527
Query: 490 ----------GVVQCMIKQGCKPDQNT 506
GV+ C + + CK N
Sbjct: 528 MINMMEMEPDGVIWCSLLKACKMHGNV 554
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 143/323 (44%), Gaps = 14/323 (4%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ DM + PD T T++S C E ++ I G ++ NAL+D+Y
Sbjct: 253 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K + A + +++ + ++++ +LI Y L +EAL L +M+ P+
Sbjct: 313 KCGELETACGLFERLPYK----DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDV 368
Query: 121 TYTTLLSGFVNAKKDELA--MRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFK 178
T ++L + ++ + V+ + R G +LI MY G +VF
Sbjct: 369 TMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFN 428
Query: 179 EIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 238
I + +WN ++ F +G +F M++ G P+ TF L+SA S G
Sbjct: 429 SI----LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSG 484
Query: 239 SFDQARAVYKRMLEA-GVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTY 297
D R +++ M + +TP L Y ++ L GL++++E++++ ME +P+ V +
Sbjct: 485 MLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEM---EPDGVIW 541
Query: 298 SSLLHAYANGKEFEKMNALAEEI 320
SLL A E + AE +
Sbjct: 542 CSLLKACKMHGNVELGESFAENL 564
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 188/433 (43%), Gaps = 12/433 (2%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M S G P+ N ++ ++ ALE+FE I+ + + G+
Sbjct: 134 MSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFFSFDIALSHFCSRGGRGDL 193
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+ VLK+M GF P+ + ++ R G + EA ++ M+ I V ++
Sbjct: 194 VGVKI-VLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSM 252
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
L+SGF + + + A+ +F +M GC PN+ T+ +LIK + D GM E V ++++
Sbjct: 253 LVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEG 312
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
+PDIV N ++ + + G E VF +++ VP++ TF +++S+ G FD
Sbjct: 313 LAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVP 372
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
+ + G DL T N + ++ G + KVLS M + TY+ L A
Sbjct: 373 RITHGI---GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSAL 429
Query: 305 ANG----KEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI 360
G + + +E H+ ++ +L+ + K++ A H F
Sbjct: 430 CRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELG-KYN---TAVHLFKRCILEKY 485
Query: 361 PHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEM 420
P D+ + + R K + + + M E G + Y +++ + + K
Sbjct: 486 PLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRK 545
Query: 421 ILREILEKGIEPD 433
ILRE +++G+E D
Sbjct: 546 ILRECIQEGVELD 558
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/490 (22%), Positives = 209/490 (42%), Gaps = 40/490 (8%)
Query: 35 ELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAY 94
+ E +K++G + LL+++ + +A+EV M S GF P+ ++
Sbjct: 94 RIIERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVN 153
Query: 95 VRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVN--AKKDELAMR-VFEEMRTAGCK 151
+ ++ ALE+ + ++ +++ LS F + + D + ++ V + M G
Sbjct: 154 FKLNVVNGALEIFEGIRFRNF----FSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFY 209
Query: 152 PNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGV 211
PN F ++++ G +E +V + S + W+ L++ F ++G + +
Sbjct: 210 PNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDL 269
Query: 212 FKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALAR 271
F +M + G P T+ +LI + G D+A V ++ G+ PD+ N ++ R
Sbjct: 270 FNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTR 329
Query: 272 GGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVL 331
G +E++ KV + +E + P++ T++S+L + +F+ L I G I T L
Sbjct: 330 LGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFD----LVPRITHG-IGTDFDL 384
Query: 332 LKTLVLVN--SKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRK----------KL 379
+ +L N SK + + A + D T LS R K+
Sbjct: 385 VTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKI 444
Query: 380 VAKTNKILKFMYESGFT---LSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLIS 436
+ K K L + S + L YN+ ++L R ILEK D++S
Sbjct: 445 IIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRC------------ILEK-YPLDVVS 491
Query: 437 YNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMI 496
Y + I R ++ EA + +MK+ P+ TY T ++ + +++ I
Sbjct: 492 YTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECI 551
Query: 497 KQGCKPDQNT 506
++G + D NT
Sbjct: 552 QEGVELDPNT 561
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 151/355 (42%), Gaps = 40/355 (11%)
Query: 1 MLMDMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L M +G P+ F ++ CCR G + EA ++ + +G+ + ++ L+ +
Sbjct: 199 VLKRMIGEGFYPNRERFGQILRLCCRTGCV-SEAFQVVGLMICSGISVSVNVWSMLVSGF 257
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
+S P++A+++ +M G P++VTYTSLI +V G+++EA + +++ + + PD+
Sbjct: 258 FRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDI 317
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
++ + + E A +VF + P+ TF +++ G F + ++
Sbjct: 318 VLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHG 377
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
I D+VT N L F + G +S V M F + T+ +SA R G+
Sbjct: 378 IGT---DFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGA 434
Query: 240 -----------------------------------FDQARAVYKRMLEAGVTPDLSTYNA 264
++ A ++KR + D+ +Y
Sbjct: 435 PRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTV 494
Query: 265 VLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEE 319
+ L R E++ + +M+ G PN TY +++ KE EK+ + E
Sbjct: 495 AIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRE 549
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/401 (20%), Positives = 166/401 (41%), Gaps = 47/401 (11%)
Query: 115 IKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMG 174
IKP V+ LL F + A+ V+ M + G PN N ++ + +
Sbjct: 106 IKPRVFL--LLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGAL 163
Query: 175 KVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGV---FKEMKRAGFVPERETFNTLI 231
++F+ I+ + +++ L+ F G ++ GV K M GF P RE F ++
Sbjct: 164 EIFEGIRF----RNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQIL 219
Query: 232 SAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCK 291
R G +A V M+ +G++ ++ ++ +++ R G +++ + ++M C
Sbjct: 220 RLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCS 279
Query: 292 PNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHA 351
PN VTY+SL+ + + ++ + ++ S + VL ++ ++ EA
Sbjct: 280 PNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKV 339
Query: 352 FLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSR 411
F +KR + D T ++LS +L L G
Sbjct: 340 FTSLEKRKLVPDQYTFASILS-----------------------SLCLSG---------- 366
Query: 412 TRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVT 471
K +++ R G + DL++ N++ + + G + A ++L+ M D T
Sbjct: 367 -----KFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYT 421
Query: 472 YNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
Y +++ AI + + +IK+ D + +++I+D
Sbjct: 422 YTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIID 462
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 75/149 (50%)
Query: 367 LNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREIL 426
+L L R V++ +++ M SG ++S+ ++ L+ R+ +K+ + +++
Sbjct: 215 FGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMI 274
Query: 427 EKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFG 486
+ G P+L++Y +I + G + EA +L++++ PD+V N + TY F
Sbjct: 275 QIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFE 334
Query: 487 EAIGVVQCMIKQGCKPDQNTYNSIVDWYC 515
EA V + K+ PDQ T+ SI+ C
Sbjct: 335 EARKVFTSLEKRKLVPDQYTFASILSSLC 363
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 108/249 (43%), Gaps = 9/249 (3%)
Query: 279 EKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSG----KITTHAVLLKT 334
++++ ++ C+ + LL + G ++K A E+Y+G + +
Sbjct: 93 DRIIERLKISGCEIKPRVFLLLLEIFWRGHIYDK----AIEVYTGMSSFGFVPNTRAMNM 148
Query: 335 LVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESG 394
++ VN K + + A F + R L+ S GR LV +LK M G
Sbjct: 149 MMDVNFKLNVVNGALEIFEGIRFRNFFSFDIALSHFCSRGGRGDLVG-VKIVLKRMIGEG 207
Query: 395 FTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAK 454
F + + ++ L RT ++ ++ ++ GI + +++++ + R+G+ +A
Sbjct: 208 FYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAV 267
Query: 455 RILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWY 514
+ N+M P++VTY + + + M EA V+ + +G PD N ++ Y
Sbjct: 268 DLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTY 327
Query: 515 CKLHLREEA 523
+L EEA
Sbjct: 328 TRLGRFEEA 336
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 163/347 (46%), Gaps = 6/347 (1%)
Query: 35 ELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAY 94
E F KL L P M T+N L+ V S+ + A VL+ ++ G YT+LIS+
Sbjct: 454 EAFRFTKLI-LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSC 512
Query: 95 VRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNI 154
+ G ++ E+ +QM ++ +++T+ L+ G A + A + +R+ KP+
Sbjct: 513 AKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDR 572
Query: 155 CTFNALIKMYGDRGMFAEMGKVFKEIKA--CQCSPDIVTWNTLLAVFGQNGLDSEVSGVF 212
FNALI G G V E+KA PD ++ L+ G V+
Sbjct: 573 VVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVY 632
Query: 213 KEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARG 272
+ + + G E + +++ S+ G +D A ++YK M E VTPD ++A++
Sbjct: 633 QMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHA 692
Query: 273 GLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLL 332
+ +++ +L + ++ + ++YSSL+ A N K+++K L E+I S K+ +
Sbjct: 693 KMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTM 752
Query: 333 KTLVLVNSKFDFLAEAEHAFLEFKKRGI-PHDITTLNAMLSLYGRKK 378
L+ + + L +A E K G+ P+ IT +ML L +K
Sbjct: 753 NALITALCEGNQLPKAMEYLDEIKTLGLKPNTITY--SMLMLASERK 797
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 178/399 (44%), Gaps = 4/399 (1%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
++ G+ D + TLIS C + E+F ++ +G+ ++ T+ AL+D ++ +
Sbjct: 493 VQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQ 552
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQM-VEKH-IKPDVYTY 122
+A + S+ P V + +LISA + G ++ A ++ +M E H I PD +
Sbjct: 553 VAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISI 612
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
L+ NA + E A V++ + G + + + G + ++K++K
Sbjct: 613 GALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKE 672
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
+PD V ++ L+ V G + E G+ ++ K G ++++L+ A + +
Sbjct: 673 KDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKK 732
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
A +Y+++ + P +ST NA++ AL G ++ + L E++ KPN +TYS L+
Sbjct: 733 ALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLML 792
Query: 303 AYANGKEFEKMNALAEEIYSGKITTHAVLLKTLV-LVNSKFDFLAEAEHAFLEFKKRGIP 361
A +FE L + ++ + ++ + + L +F+ + FK G P
Sbjct: 793 ASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCITSLCKRRFEKACAGGEPVVSFKS-GRP 851
Query: 362 HDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLP 400
+M + R+ + T + + + L LP
Sbjct: 852 QIENKWTSMALMVYRETISGGTVPTTEVVSQVLGCLQLP 890
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 184/438 (42%), Gaps = 31/438 (7%)
Query: 57 DVYGKSRRPKEAMEV-------LKQMESRGF---------PPSIVTYTSLISAYVRDGLL 100
DV G + P + V + Q +R F P + Y L+ RDG +
Sbjct: 361 DVKGDWKFPSDGKHVGHQIDESMPQFPARNFELHNSNGRSPETSDAYNRLL----RDGRI 416
Query: 101 EEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNAL 160
++ + L + ++ + Y + F A K + A++ P + TFN L
Sbjct: 417 KDCISLLEDLDQRDLLDMDKIYH---ASFFKACKKQRAVKEAFRFTKLILNPTMSTFNML 473
Query: 161 IKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGF 220
+ + V + ++ + D + TL++ ++G + VF +M +G
Sbjct: 474 MSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGV 533
Query: 221 VPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEK 280
TF LI +R G +A Y + V PD +NA+++A + G +++
Sbjct: 534 EANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFD 593
Query: 281 VLSEM--ENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLV 338
VL+EM E P+ ++ +L+ A N + E+ + + I+ I + V
Sbjct: 594 VLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNS 653
Query: 339 NSK---FDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGF 395
SK +DF A + + K++ + D +A++ + G K++ + IL+ G
Sbjct: 654 CSKSGDWDF---ACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGI 710
Query: 396 TLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKR 455
L Y+SLM ++++K+ + +I + P + + N +I A C ++ +A
Sbjct: 711 RLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAME 770
Query: 456 ILNEMKDPAPVPDVVTYN 473
L+E+K P+ +TY+
Sbjct: 771 YLDEIKTLGLKPNTITYS 788
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 120/292 (41%), Gaps = 27/292 (9%)
Query: 3 MDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGK 61
M ++ + PD + L+ +CC AG + E A E+++ I G+R Y ++ K
Sbjct: 598 MKAETHPIDPDHISIGALMKACCNAGQV-ERAKEVYQMIHKYGIRGTPEVYTIAVNSCSK 656
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYT 121
S A + K M+ + P V +++LI +L+EA + + I+ +
Sbjct: 657 SGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTIS 716
Query: 122 YTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK 181
Y++L+ NAK + A+ ++E++++ +P I T NALI + + + EIK
Sbjct: 717 YSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIK 776
Query: 182 ACQCSPDIVTWNTLLAVFGQNGLDSEVS-GVFKEMKRAGFVPE-----------RETFNT 229
P+ +T+ ++L + + D EVS + + K G P + F
Sbjct: 777 TLGLKPNTITY-SMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCITSLCKRRFEK 835
Query: 230 LISAYSRCGSFDQARA------------VYKRMLEAGVTPDLSTYNAVLAAL 269
+ SF R VY+ + G P + VL L
Sbjct: 836 ACAGGEPVVSFKSGRPQIENKWTSMALMVYRETISGGTVPTTEVVSQVLGCL 887
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 68/119 (57%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L D KSQG+ ++++L+ C +++ALEL+E+IK LRP + T NAL+
Sbjct: 701 ILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALC 760
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
+ + +AME L ++++ G P+ +TY+ L+ A R E + +L +Q + P++
Sbjct: 761 EGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNL 819
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/350 (18%), Positives = 151/350 (43%), Gaps = 33/350 (9%)
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
+P + T+N L++V + GV + ++ +G + + + TLIS+ ++ G D
Sbjct: 464 NPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFE 523
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA 305
V+ +M +GV +L T+ A++ AR G ++ + + KP+ V +++L+ A
Sbjct: 524 VFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACG 583
Query: 306 NGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDIT 365
SG V+ FD LAE ++ + I D
Sbjct: 584 Q---------------SGA-------------VDRAFDVLAE-----MKAETHPIDPDHI 610
Query: 366 TLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREI 425
++ A++ V + ++ + +++ G + Y + S++ ++ + I +++
Sbjct: 611 SIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDM 670
Query: 426 LEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMF 485
EK + PD + ++ +I + EA IL + K ++Y++ + +
Sbjct: 671 KEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDW 730
Query: 486 GEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDL 535
+A+ + + + +P +T N+++ C+ + +A ++ + +L L
Sbjct: 731 KKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGL 780
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/508 (22%), Positives = 213/508 (41%), Gaps = 60/508 (11%)
Query: 38 EEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRD 97
E IKL GL ++ ++L+ +Y K + + A +V + +E + + V + ++I Y +
Sbjct: 352 EAIKL-GLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEK----NDVFWNAMIRGYAHN 406
Query: 98 GLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTF 157
G + +EL M D +T+T+LLS + E+ + + N+
Sbjct: 407 GESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVG 466
Query: 158 NALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKR 217
NAL+ MY G + ++F+ + C D VTWNT++ + Q+ +SE +FK M
Sbjct: 467 NALVDMYAKCGALEDARQIFERM----CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNL 522
Query: 218 AGFVPER-----------------------------------ETFNTLISAYSRCGSFDQ 242
G V + T ++LI YS+CG
Sbjct: 523 CGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKD 582
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
AR V+ + E V + NA++A ++ L E++ + EM P+E+T+++++
Sbjct: 583 ARKVFSSLPEWSVV----SMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVE 637
Query: 303 AYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVL---VNSKFDFLAEAEHAFLEFKKRG 359
A + +I ++ L +L +NS+ + EA F E
Sbjct: 638 ACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSR--GMTEACALFSELSS-- 693
Query: 360 IPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSE 419
P I M+S + + + K K M G + +++ + S + R+
Sbjct: 694 -PKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGR 752
Query: 420 MILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATY 479
I I + D ++ N +I Y + G M + ++ +EM+ + +VV++N+ + Y
Sbjct: 753 AIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRS---NVVSWNSLINGY 809
Query: 480 AANSMFGEAIGVVQCMIKQGCKPDQNTY 507
A N +A+ + M + PD+ T+
Sbjct: 810 AKNGYAEDALKIFDSMRQSHIMPDEITF 837
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 107/538 (19%), Positives = 225/538 (41%), Gaps = 56/538 (10%)
Query: 10 LAPDLCTFNTLIS----CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRP 65
L D+ +N+++S + G + + LFE + P+ T++ +L +
Sbjct: 121 LEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFEN----QIFPNKFTFSIVLSTCARETNV 176
Query: 66 KEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTL 125
+ ++ M G + +L+ Y + + +A ++ E + P+ +T L
Sbjct: 177 EFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDA----RRVFEWIVDPNTVCWTCL 232
Query: 126 LSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQC 185
SG+V A E A+ VFE MR G +P+ F +I Y G + +F E+
Sbjct: 233 FSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS---- 288
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
SPD+V WN +++ G+ G ++ F M+++ R T +++SA + D
Sbjct: 289 SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLV 348
Query: 246 VYKRMLEAGVTPDLST-------------------------------YNAVLAALARGGL 274
V+ ++ G+ ++ +NA++ A G
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE 408
Query: 275 WEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKT 334
+ ++ +M++ ++ T++SLL A + E + I K+ + +
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNA 468
Query: 335 LVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESG 394
LV + +K L +A F +R D T N ++ Y + + ++ + K M G
Sbjct: 469 LVDMYAKCGALEDARQIF----ERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCG 524
Query: 395 FTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAK 454
S + + + + + ++ G++ DL + + +I Y + G + +A+
Sbjct: 525 IVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDAR 584
Query: 455 RILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
++ + + P VV+ N +A Y+ N++ EA+ + Q M+ +G P + T+ +IV+
Sbjct: 585 KVFSSL----PEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVE 637
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 117/528 (22%), Positives = 216/528 (40%), Gaps = 50/528 (9%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ MDMKS G D TF +L+S C A E + I L ++ NAL+D+Y
Sbjct: 415 LFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYA 474
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K ++A ++ ++M R VT+ ++I +YV+D EA +L +M I D
Sbjct: 475 KCGALEDARQIFERMCDR----DNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGA 530
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
+ L + +V G ++ T ++LI MY G+ + KVF +
Sbjct: 531 CLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSL 590
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+V+ N L+A + QN L+ V +F+EM G P TF T++ A + S
Sbjct: 591 PEWS----VVSMNALIAGYSQNNLEEAVV-LFQEMLTRGVNPSEITFATIVEACHKPESL 645
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
+ ++ + G + + E SL
Sbjct: 646 TLGTQFHGQITKRGFSSE----------------------------------GEYLGISL 671
Query: 301 LHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI 360
L Y N + + AL E+ S K VL ++ +S+ F EA + E + G+
Sbjct: 672 LGMYMNSRGMTEACALFSELSSPK---SIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGV 728
Query: 361 PHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEM 420
D T +L + + + I ++ L N+L+ ++++ + + S
Sbjct: 729 LPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQ 788
Query: 421 ILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYA 480
+ E+ + +++S+N +I Y +NG +A +I + M+ +PD +T+ + +
Sbjct: 789 VFDEMRRR---SNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACS 845
Query: 481 ANSMFGEAIGVVQCMIKQ-GCKPDQNTYNSIVDWYCKLHLREEAYNFV 527
+ + + MI Q G + + +VD + +EA +F+
Sbjct: 846 HAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFI 893
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 118/254 (46%), Gaps = 10/254 (3%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M+ G+ PD TF T++ C S E + I D +T N L+D+Y K
Sbjct: 722 EMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCG 781
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
K + +V +M R ++V++ SLI+ Y ++G E+AL++ + M + HI PD T+
Sbjct: 782 DMKGSSQVFDEMRRR---SNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFL 838
Query: 124 TLLSGFVNAKKDELAMRVFEEM-RTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
+L+ +A K ++FE M G + + ++ + G G E I+A
Sbjct: 839 GVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDF---IEA 895
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLIS-AYSRCGSFD 241
PD W++LL +G D + G K P+ + L+S Y+ G ++
Sbjct: 896 QNLKPDARLWSSLLGACRIHGDD--IRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWE 953
Query: 242 QARAVYKRMLEAGV 255
+A A+ K M + GV
Sbjct: 954 KANALRKVMRDRGV 967
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 133/300 (44%), Gaps = 53/300 (17%)
Query: 256 TPDLS--TYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKM 313
+PDL Y VL + +Q + L E+ G+CK + + K F++M
Sbjct: 26 SPDLGRRIYGHVLPS------HDQIHQRLLEICLGQCK-----------LFKSRKVFDEM 68
Query: 314 -NALAEEIYSGKITTHAVLLKTLVLV--------NSKFDFLAE-AEHAFLEFKKRGIPHD 363
LA + GK AV K+L+L N+ D A+ A+ ++ E + + D
Sbjct: 69 PQRLALALRIGK----AVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEKD 124
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKF--------MYESGFTLSLPGYNSLMYLHSRTRNF 415
+T N+MLS+Y + K K+L+ ++ + FT S+ ++ +R N
Sbjct: 125 VTAWNSMLSMYSS---IGKPGKVLRSFVSLFENQIFPNKFTFSI-----VLSTCARETNV 176
Query: 416 RKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTF 475
I +++ G+E + ++ Y + ++++A+R+ + DP + V +
Sbjct: 177 EFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDP----NTVCWTCL 232
Query: 476 VATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDL 535
+ Y + EA+ V + M +G +PD + ++++ Y +L ++A +SS D+
Sbjct: 233 FSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDV 292
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 123/270 (45%)
Query: 16 TFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQM 75
+ NTLI+ E+A F+ K LRP+ V++N L+ + + A +V +M
Sbjct: 153 SLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEM 212
Query: 76 ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKD 135
PS+VTY SLI R+ + +A L M++K I+P+ T+ L+ G +
Sbjct: 213 LEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEY 272
Query: 136 ELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTL 195
A ++ +M GCKP + + L+ G RG E + E+K + PD+V +N L
Sbjct: 273 NEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNIL 332
Query: 196 LAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGV 255
+ E V EM+ G P T+ +I + R FD V ML +
Sbjct: 333 VNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRH 392
Query: 256 TPDLSTYNAVLAALARGGLWEQSEKVLSEM 285
P +T+ ++A L +GG + + VL M
Sbjct: 393 CPTPATFVCMVAGLIKGGNLDHACFVLEVM 422
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 134/272 (49%)
Query: 31 EEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSL 90
EEAL LF + + G R D +Y++L+ KSR ++L+ + R + L
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 91 ISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
I Y + G +++A+++ +++ + + TL++ V+ + E A F+ +
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
+PN +FN LIK + D+ + KVF E+ + P +VT+N+L+ +N +
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 211 VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
+ ++M + P TF L+ G +++A+ + M G P L Y +++ L
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLG 302
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
+ G ++++ +L EM+ R KP+ V Y+ L++
Sbjct: 303 KRGRIDEAKLLLGEMKKRRIKPDVVIYNILVN 334
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 152/328 (46%), Gaps = 1/328 (0%)
Query: 6 KSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRP 65
+ G D ++++LI ++ ++ ++ +R + L+ YGK+
Sbjct: 73 QEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSV 132
Query: 66 KEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTL 125
+A++V ++ S +I + +LI+ V +G LE+A + + ++P+ ++ L
Sbjct: 133 DKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNIL 192
Query: 126 LSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQC 185
+ GF++ E A +VF+EM +P++ T+N+LI + + +++ +
Sbjct: 193 IKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRI 252
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
P+ VT+ L+ G +E + +M+ G P + L+S + G D+A+
Sbjct: 253 RPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKL 312
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA 305
+ M + + PD+ YN ++ L ++ +VL+EM+ CKPN TY ++ +
Sbjct: 313 LLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFC 372
Query: 306 NGKEFEK-MNALAEEIYSGKITTHAVLL 332
++F+ +N L + S T A +
Sbjct: 373 RIEDFDSGLNVLNAMLASRHCPTPATFV 400
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 166/419 (39%), Gaps = 43/419 (10%)
Query: 101 EEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNAL 160
EEAL L +Q E + D +Y++L+ ++ + ++ +R + F L
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 161 IKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGF 220
I+ YG G + VF +I + C I + NTL+ V NG + F K
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 221 VPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEK 280
P +FN LI + ++ A V+ MLE V P + TYN+++ L R +++
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 281 VLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEI-YSG---KITTHAVLLKTLV 336
+L +M R +PN VT+ L+ E+ + L ++ Y G + + +L+ L
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDL- 301
Query: 337 LVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFT 396
K + EA+ E KKR I D+ N +++
Sbjct: 302 ---GKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVN------------------------ 334
Query: 397 LSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRI 456
+L + R ++ +L E+ KG +P+ +Y ++I +CR +
Sbjct: 335 ----------HLCTECR-VPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNV 383
Query: 457 LNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYC 515
LN M P T+ VA A V++ M K+ + +++ C
Sbjct: 384 LNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 134/310 (43%), Gaps = 40/310 (12%)
Query: 224 RET-FNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVL 282
RE+ F LI Y + GS D+A V+ ++ + + N ++ L G E+++
Sbjct: 115 RESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFF 174
Query: 283 SEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKF 342
++ R +PN V+++ L+ + + ++E + +E+ ++ V +L+ +
Sbjct: 175 DGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRN 234
Query: 343 DFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKT--NKILKFMYESGFTLSLP 400
D + +A+ + K+ I + T ++ K L K N+ K M++ +
Sbjct: 235 DDMGKAKSLLEDMIKKRIRPNAVTFGLLM-----KGLCCKGEYNEAKKLMFDMEY----- 284
Query: 401 GYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEM 460
+G +P L++Y I++ + G++ EAK +L EM
Sbjct: 285 ---------------------------RGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEM 317
Query: 461 KDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLR 520
K PDVV YN V EA V+ M +GCKP+ TY ++D +C++
Sbjct: 318 KKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDF 377
Query: 521 EEAYNFVHNL 530
+ N ++ +
Sbjct: 378 DSGLNVLNAM 387
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 136/292 (46%), Gaps = 11/292 (3%)
Query: 25 RAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY---GKSRRPKEAMEVLKQMESRGFP 81
+AGS+ ++A+++F +I + + N L++V G+ + K + K M R
Sbjct: 128 KAGSV-DKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLR--- 183
Query: 82 PSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDEL--AM 139
P+ V++ LI ++ E A ++ ++M+E ++P V TY +L+ GF+ + D++ A
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLI-GFL-CRNDDMGKAK 241
Query: 140 RVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVF 199
+ E+M +PN TF L+K +G + E K+ +++ C P +V + L++
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDL 301
Query: 200 GQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDL 259
G+ G E + EMK+ P+ +N L++ +A V M G P+
Sbjct: 302 GKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNA 361
Query: 260 STYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE 311
+TY ++ R ++ VL+ M R P T+ ++ G +
Sbjct: 362 ATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLD 413
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 5/203 (2%)
Query: 2 LMDMKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+++M+ Q P + T+N+LI CR + +A L E++ +RP+ VT+ L+
Sbjct: 212 MLEMEVQ---PSVVTYNSLIGFLCRNDDM-GKAKSLLEDMIKKRIRPNAVTFGLLMKGLC 267
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
EA +++ ME RG P +V Y L+S + G ++EA L +M ++ IKPDV
Sbjct: 268 CKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVV 327
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
Y L++ + A RV EM+ GCKPN T+ +I + F V +
Sbjct: 328 IYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAM 387
Query: 181 KACQCSPDIVTWNTLLAVFGQNG 203
A + P T+ ++A + G
Sbjct: 388 LASRHCPTPATFVCMVAGLIKGG 410
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 4/163 (2%)
Query: 1 MLMDMKSQGLAPDLCTFNTLIS--CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDV 58
+L DM + + P+ TF L+ CC+ Y EA +L +++ G +P +V Y L+
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGE--YNEAKKLMFDMEYRGCKPGLVNYGILMSD 300
Query: 59 YGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPD 118
GK R EA +L +M+ R P +V Y L++ + + EA + +M K KP+
Sbjct: 301 LGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPN 360
Query: 119 VYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALI 161
TY ++ GF + + + V M + P TF ++
Sbjct: 361 AATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMV 403
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
++ DM+ +G P L + L+S +EA L E+K ++PD+V YN L++
Sbjct: 278 LMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLC 337
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
R EA VL +M+ +G P+ TY +I + R + L + N M+ P
Sbjct: 338 TECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPA 397
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEM 145
T+ +++G + + A V E M
Sbjct: 398 TFVCMVAGLIKGGNLDHACFVLEVM 422
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 61/127 (48%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +MK + + PD+ +N L++ EA + E+++ G +P+ TY ++D +
Sbjct: 313 LLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFC 372
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ + VL M + P+ T+ +++ ++ G L+ A + M +K++
Sbjct: 373 RIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSG 432
Query: 121 TYTTLLS 127
+ LLS
Sbjct: 433 AWQNLLS 439
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 154/347 (44%), Gaps = 49/347 (14%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALL---------------- 56
D+ ++NT+I+ +YE+AL + E+ L+PD T +++L
Sbjct: 206 DVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIH 265
Query: 57 -------------------DVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRD 97
D+Y KS R +++ V ++ R +++ SL++ YV++
Sbjct: 266 GYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCR----DGISWNSLVAGYVQN 321
Query: 98 GLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTF 157
G EAL L QMV +KP +++++ + L ++ + G NI
Sbjct: 322 GRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIA 381
Query: 158 NALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKR 217
+AL+ MY G K+F + D V+W ++ +G E +F+EMKR
Sbjct: 382 SALVDMYSKCGNIKAARKIFDRMNVL----DEVSWTAIIMGHALHGHGHEAVSLFEEMKR 437
Query: 218 AGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEA-GVTPDLSTYNAVLAALARGGLWE 276
G P + F +++A S G D+A + M + G+ +L Y AV L R G E
Sbjct: 438 QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE 497
Query: 277 QSEKVLSEMENGRC-KPNEVTYSSLLHAYANGKEFEKMNALAEEIYS 322
++ +S+M C +P +S+LL + + K E +AE+I++
Sbjct: 498 EAYNFISKM----CVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFT 540
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 109/520 (20%), Positives = 206/520 (39%), Gaps = 99/520 (19%)
Query: 82 PSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRV 141
P ++ + S+I + L +AL +M PD + ++L V
Sbjct: 68 PPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESV 127
Query: 142 FEEMRTAGCKPNICTFNALIKMYGD---RGMFAEMGKVFKE------------IKACQC- 185
+ G ++ T NAL+ MY G +G VF E +KA C
Sbjct: 128 HGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCI 187
Query: 186 ----------------SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNT 229
D+V++NT++A + Q+G+ + + +EM P+ T ++
Sbjct: 188 MPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSS 247
Query: 230 LISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGR 289
++ +S + + ++ ++ G+ D+ ++++ A+ E SE+V S +
Sbjct: 248 VLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL---Y 304
Query: 290 CKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAE 349
C+ + ++++SL+ Y + + L ++ + K+ AV +++ A A
Sbjct: 305 CR-DGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIP--------ACAH 355
Query: 350 HAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLH 409
A L K+ L+G ++ GF ++ ++L+ ++
Sbjct: 356 LATLHLGKQ--------------LHG-------------YVLRGGFGSNIFIASALVDMY 388
Query: 410 SRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDV 469
S+ N + + R+I ++ D +S+ +I + +G EA + EMK P+
Sbjct: 389 SKCGNIKAA----RKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQ 444
Query: 470 VTYNTFVATYAANSMFG---EAIGVVQCMIK-QGCKPDQNTYNSIVDWYCKLHLREEAYN 525
V FVA A S G EA G M K G + Y ++ D + EEAYN
Sbjct: 445 VA---FVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYN 501
Query: 526 FVHN-------------LSSLDLHVSEEEKGRLLERIAEK 552
F+ LSS +H + E L E++AEK
Sbjct: 502 FISKMCVEPTGSVWSTLLSSCSVHKNLE----LAEKVAEK 537
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/414 (19%), Positives = 170/414 (41%), Gaps = 64/414 (15%)
Query: 11 APDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAME 70
+P + + ++I C SL+ +AL F E++ +G PD + ++L +
Sbjct: 67 SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGES 126
Query: 71 VLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKN------QMVEKHIKPDVYTYTT 124
V + G + T +L++ Y + + + + N Q DV T
Sbjct: 127 VHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETC 186
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
++ +++ + RVFE M + ++ ++N +I Y GM+ + ++ +E+
Sbjct: 187 IMPFGIDSVR-----RVFEVMP----RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTD 237
Query: 185 CSPDIVTWNTLLAVFGQ----------------NGLDSEV---SGVFKEMKRAGFVPERE 225
PD T +++L +F + G+DS+V S + ++ + + E
Sbjct: 238 LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSE 297
Query: 226 ------------TFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGG 273
++N+L++ Y + G +++A ++++M+ A V P +++V+ A A
Sbjct: 298 RVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLA 357
Query: 274 LWEQSEKVLSEMENGRCKPNEVTYSSLLHAY-------ANGKEFEKMNALAEEIYSGKIT 326
+++ + G N S+L+ Y A K F++MN L E ++ I
Sbjct: 358 TLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIM 417
Query: 327 THAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLV 380
HA+ EA F E K++G+ + A+L+ LV
Sbjct: 418 GHAL-----------HGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLV 460
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 135/265 (50%), Gaps = 12/265 (4%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEI--KLAGLRPDMVTYNALLDV 58
M +M G + +FN L++ C L+E +LF+E + + PD ++Y L+
Sbjct: 124 MFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKS 183
Query: 59 YGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPD 118
Y S +P++AME+++ ME +G +I+ +T+++ + ++GL++EA L +MV K D
Sbjct: 184 YCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLD 243
Query: 119 VYTYTTLLSGFVNAKKD--ELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKV 176
Y L +NA K+ E + EEM + G KP+ ++N L+ Y +GM +E KV
Sbjct: 244 NTVYNVRL---MNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKV 300
Query: 177 FKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 236
++ ++ P+ T+ TL+ NGL + VFK+ +P+ +T L +
Sbjct: 301 YEGLE----QPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVK 356
Query: 237 CGSFDQARAVYKRMLEAGVTPDLST 261
+ AR V R+++ P L T
Sbjct: 357 NNRMEDARGV-ARIVKKKFPPRLVT 380
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 112/227 (49%), Gaps = 7/227 (3%)
Query: 53 NALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVE 112
+ L+ YG++ AM++ ++M+ G P ++V++ +L++A + L E +L ++ +
Sbjct: 106 STLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQ 165
Query: 113 KH--IKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMF 170
++ I PD +Y L+ + ++ K E AM + +M G + I F ++ G+
Sbjct: 166 RYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLV 225
Query: 171 AEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTL 230
E ++ E+ C D +N L + + V + +EM G P+ ++N L
Sbjct: 226 DEAESLWIEMVNKGCDLDNTVYNVRLMNAAKESPE-RVKELMEEMSSVGLKPDTVSYNYL 284
Query: 231 ISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQ 277
++AY G +A+ VY+ + + P+ +T+ ++ L GL++Q
Sbjct: 285 MTAYCVKGMMSEAKKVYEGLEQ----PNAATFRTLIFHLCINGLYDQ 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 128/302 (42%), Gaps = 43/302 (14%)
Query: 225 ETF-NTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLS 283
ETF +TLI +Y R FD A +++ M + G + ++NA+LAA L+E+ ++
Sbjct: 102 ETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFD 161
Query: 284 EMEN--GRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSK 341
E P++++Y L+ +Y + + EK + ++ + + T++ K
Sbjct: 162 EFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYK 221
Query: 342 FDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPG 401
+ EAE ++E +G D T N L
Sbjct: 222 NGLVDEAESLWIEMVNKGCDLDNTVYNVRL------------------------------ 251
Query: 402 YNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMK 461
+++ + + + ++ E+ G++PD +SYN ++ AYC G M+EAK++ ++
Sbjct: 252 ------MNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLE 305
Query: 462 DPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLRE 521
P+ T+ T + N ++ + + V + PD T + + K + E
Sbjct: 306 Q----PNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRME 361
Query: 522 EA 523
+A
Sbjct: 362 DA 363
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 76/206 (36%), Gaps = 37/206 (17%)
Query: 305 ANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDI 364
A + F + AL E + L TL+ + A F E K G P +
Sbjct: 78 AKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTV 137
Query: 365 TTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILRE 424
+ NA+L+ LHS F + + E
Sbjct: 138 VSFNALLA---------------------------------ACLHSDL--FERVPQLFDE 162
Query: 425 ILEK--GIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAAN 482
++ I PD ISY ++I +YC +GK +A I+ +M+ ++ + T + + N
Sbjct: 163 FPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKN 222
Query: 483 SMFGEAIGVVQCMIKQGCKPDQNTYN 508
+ EA + M+ +GC D YN
Sbjct: 223 GLVDEAESLWIEMVNKGCDLDNTVYN 248
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/548 (21%), Positives = 226/548 (41%), Gaps = 60/548 (10%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
++ DM+++G PD+ TF TLI C L E A ++F+E+++ G+RP+ +T + L+ +
Sbjct: 184 LVFDMRNRGHLPDVVTFTTLIGGYCEIREL-EVAHKVFDEMRVCGIRPNSLTLSVLIGGF 242
Query: 60 GKSRRPKEAMEVLKQM-----ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKH 114
K R + +++K++ + +L+ + R+G + E+ M
Sbjct: 243 LKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCE 302
Query: 115 IKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMG 174
+ Y ++ +++ A R+ M++ G KP ++NA+I G
Sbjct: 303 SVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAY 362
Query: 175 KVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAY 234
++ +E + P T+ L+ + + V + M R +N +
Sbjct: 363 QLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGL 422
Query: 235 SRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGR-CKPN 293
+ + V ML+ PD T N V+ L + G + + KVL +M G+ C P+
Sbjct: 423 CVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPD 482
Query: 294 EVTYSSLLHA-YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAF 352
VT ++++ A G+ E ++ L + KI V ++ K EA F
Sbjct: 483 AVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVF 542
Query: 353 LEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRT 412
+ +K + D TT ++ + TNK+ ++ ++ +++ R
Sbjct: 543 GQLEKASVTADSTTYAIIID------GLCVTNKV---------DMAKKFWDDVIWPSGRH 587
Query: 413 RNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTY 472
D Y + C++G +++A L ++ D +P+VV Y
Sbjct: 588 --------------------DAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCY 627
Query: 473 NTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSS 532
NT +A + + + EA +++ M K G PD T+ I+D KLH S
Sbjct: 628 NTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWR-ILD---KLH------------DS 671
Query: 533 LDLHVSEE 540
+DL V E
Sbjct: 672 MDLTVERE 679
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 115/539 (21%), Positives = 226/539 (41%), Gaps = 19/539 (3%)
Query: 8 QGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPK 66
+G PD +++I S C AG ++EA F +G PD T N ++ SR P
Sbjct: 84 RGYRPDSLNLSSVIHSLCDAGR-FDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPV 142
Query: 67 EAMEVLKQMES--RGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+ V+ ++ + F PS+ Y L++ + +A +L M + PDV T+TT
Sbjct: 143 STLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTT 202
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI---- 180
L+ G+ ++ E+A +VF+EMR G +PN T + LI + K+ KE+
Sbjct: 203 LIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYM 262
Query: 181 -KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
S + L+ + G +++ + + M V + +I + R
Sbjct: 263 KNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRR 322
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
A + M G+ P ++YNA++ L + G ++ ++L E P+E TY
Sbjct: 323 NHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKL 382
Query: 300 LLHAYA----NGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEF 355
L+ + GK + + + + + + + L+ L ++++ + L + +
Sbjct: 383 LMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEIL----NVLVSM 438
Query: 356 KKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTL-SLPGYNSLMY-LHSRTR 413
+ D TLN +++ + V K+L M F N++M L ++ R
Sbjct: 439 LQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGR 498
Query: 414 NFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYN 473
+++ R + E I+P +++YN VI + K EA + +++ + D TY
Sbjct: 499 AEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYA 558
Query: 474 TFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSS 532
+ + A +I + D Y + + C+ +A +F+++L+
Sbjct: 559 IIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLAD 617
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 165/418 (39%), Gaps = 28/418 (6%)
Query: 130 VNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDI 189
V DE A+R+ + + G +P+ +++I D G F E + F A PD
Sbjct: 67 VRRNPDE-ALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDE 125
Query: 190 VTWNTLLAVFGQNGLDSEVSGVFKEMK--RAGFVPERETFNTLISAYSRCGSFDQARAVY 247
T N ++A + GV + + FVP +N L++ A +
Sbjct: 126 RTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLV 185
Query: 248 KRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG 307
M G PD+ T+ ++ E + KV EM +PN +T S L+ +
Sbjct: 186 FDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKM 245
Query: 308 KEFEKMNALAEEIY---------SGKITTHAVLLKTLV---LVNSKFDF---LAEAEHAF 352
++ E L +E++ S K A L+ ++ N F+ ++ E
Sbjct: 246 RDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVN 305
Query: 353 LEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRT 412
+EF H I + L Y R A +I+ M G YN++++ +
Sbjct: 306 VEF---AYGHMIDS----LCRYRRNHGAA---RIVYIMKSKGLKPRRTSYNAIIHGLCKD 355
Query: 413 RNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTY 472
++ +L E E P +Y +++ + C+ +A+ +L M Y
Sbjct: 356 GGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIY 415
Query: 473 NTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
N ++ E + V+ M++ C+PD+ T N++++ CK+ ++A + ++
Sbjct: 416 NIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDM 473
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 147/300 (49%), Gaps = 10/300 (3%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV 71
P + T NT+++ + Y L+L I AG+ P+++TYN + Y R+P+ A+E
Sbjct: 128 PTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEH 187
Query: 72 LKQ-MESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFV 130
K +++ PSI T+ L+ V + LE+A+E+K M K D Y+ L+ G V
Sbjct: 188 YKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCV 247
Query: 131 NAKKDELAMRVFEEMRT--AGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI--KACQCS 186
+ +++++E++ G + + L+K Y + M E + ++E + +
Sbjct: 248 KNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVR 307
Query: 187 PDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPER-----ETFNTLISAYSRCGSFD 241
+ +N +L +NG E +F +K+ P TFN +++ Y G F+
Sbjct: 308 MSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFE 367
Query: 242 QARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL 301
+A V+++M + +PD ++N ++ L L ++EK+ EME KP+E TY L+
Sbjct: 368 EAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLM 427
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 154/320 (48%), Gaps = 10/320 (3%)
Query: 10 LAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAM 69
L P + TF L+ + E+A+E+ E++ + G D V Y+ L+ K+ +
Sbjct: 197 LNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVL 256
Query: 70 EVLKQMESR--GFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKH--IKPDVYTYTTL 125
++ ++++ + GF V Y L+ Y + +EA+E + V ++ ++ Y +
Sbjct: 257 KLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYV 316
Query: 126 LSGFVNAKKDELAMRVFEEMRTAGCKP-----NICTFNALIKMYGDRGMFAEMGKVFKEI 180
L K + A+++F+ ++ P N+ TFN ++ Y G F E +VF+++
Sbjct: 317 LEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQM 376
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+CSPD +++N L+ N L +E ++ EM+ P+ T+ L+ + G
Sbjct: 377 GDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKI 436
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
D+ A YK M+E+ + P+L+ YN + L + G + + K +M + K ++ Y +
Sbjct: 437 DEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDA-KSFFDMMVSKLKMDDEAYKFI 495
Query: 301 LHAYANGKEFEKMNALAEEI 320
+ A + ++M + +E+
Sbjct: 496 MRALSEAGRLDEMLKIVDEM 515
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 85/415 (20%), Positives = 166/415 (40%), Gaps = 50/415 (12%)
Query: 95 VRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNI 154
+R+ LEEA V + +P ++T T+L+ + K +++ + AG PNI
Sbjct: 106 IRENDLEEAALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNI 165
Query: 155 CTFNALIKMYGD---RGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNG-------- 203
T+N + + Y D + E K+F I +P I T+ L+ N
Sbjct: 166 ITYNLIFQAYLDVRKPEIALEHYKLF--IDNAPLNPSIATFRILVKGLVSNDNLEKAMEI 223
Query: 204 ------------------------LDSEVSGVFK---EMKR--AGFVPERETFNTLISAY 234
+S+ GV K E+K GFV + + L+ Y
Sbjct: 224 KEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGY 283
Query: 235 SRCGSFDQARAVYKRMLEAGVTPDLS--TYNAVLAALARGGLWEQSEKVLSEMENGRCKP 292
+A Y+ + +S YN VL AL+ G ++++ K+ ++ P
Sbjct: 284 FMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPP 343
Query: 293 NEV-----TYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAE 347
+ T++ +++ Y G +FE+ + ++ K + + L+ + LAE
Sbjct: 344 RHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAE 403
Query: 348 AEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMY 407
AE + E +++ + D T ++ ++ + + K M ES +L YN L
Sbjct: 404 AEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQD 463
Query: 408 LHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKD 462
+ ++ ++ K ++ D +Y ++ A G++ E +I++EM D
Sbjct: 464 QLIKAGKLDDAKSFFDMMVSK-LKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLD 517
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/362 (20%), Positives = 148/362 (40%), Gaps = 18/362 (4%)
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
C P I T NT+LA + + + + +AG P T+N + AY + A
Sbjct: 126 CRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIAL 185
Query: 245 AVYKRMLE-AGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
YK ++ A + P ++T+ ++ L E++ ++ +M + V YS L+
Sbjct: 186 EHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMG 245
Query: 304 YANGKEFEKMNALAEEIYS--GKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIP 361
+ + + L +E+ G V+ L+ K F+ E E +E + +
Sbjct: 246 CVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLM----KGYFMKEMEKEAMECYEEAVG 301
Query: 362 HDITT-LNAMLSLYGRKKLV--AKTNKILKFM--------YESGFTLSLPGYNSLMYLHS 410
+ ++AM Y + L K ++ LK ++L +N ++ +
Sbjct: 302 ENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYC 361
Query: 411 RTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVV 470
F ++ + R++ + PD +S+N ++ C N + EA+++ EM++ PD
Sbjct: 362 AGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEY 421
Query: 471 TYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
TY + T E + M++ +P+ YN + D K ++A +F +
Sbjct: 422 TYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMM 481
Query: 531 SS 532
S
Sbjct: 482 VS 483
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/452 (22%), Positives = 187/452 (41%), Gaps = 41/452 (9%)
Query: 30 YEEALELFEEIKLA-GLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYT 88
+ + + F +KL RP +V Y +L +YG+ + K A E +M G P V
Sbjct: 168 WRQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACG 227
Query: 89 SLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTA 148
+++ Y R G L + E+ I Y +LS + ++ EM
Sbjct: 228 TMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEE 287
Query: 149 GCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEV 208
G PN T+ ++ Y +G E K F E+K+ P+ VT+++++++ + G +
Sbjct: 288 GVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKA 347
Query: 209 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAA 268
G++++M+ G VP T T++S Y + ++ +A +++ M + D ++
Sbjct: 348 IGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRI 407
Query: 269 LARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTH 328
+ GL+ ++ + E E +E TY ++ + N K + E + + I
Sbjct: 408 YGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLS 467
Query: 329 AVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILK 388
++ +K + AE AF K G+P D ++ N ML+LY R L K
Sbjct: 468 RFAYIVMLQCYAKIQNVDCAEEAFRALSKTGLP-DASSCNDMLNLYTRLNLGEKAK---- 522
Query: 389 FMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNG 448
GF +++I+ + D+ Y + YC+ G
Sbjct: 523 -----GF--------------------------IKQIMVDQVHFDIELYKTAMRVYCKEG 551
Query: 449 KMTEAKRILNEMKDPAPVPDVVTYNTFVATYA 480
+ EA+ ++ +M A V D N FV T A
Sbjct: 552 MVAEAQDLIVKMGREARVKD----NRFVQTLA 579
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/422 (21%), Positives = 185/422 (43%), Gaps = 6/422 (1%)
Query: 116 KPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGK 175
+P V YT +L + K ++A F EM GC+P+ ++ Y G + M
Sbjct: 185 RPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLT 244
Query: 176 VFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYS 235
+K ++ + +N +L+ + +V ++ EM G P T+ ++S+Y+
Sbjct: 245 FYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYA 304
Query: 236 RCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEV 295
+ G ++A + M G P+ TY++V++ + G WE++ + +M + P+
Sbjct: 305 KQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNY 364
Query: 296 TYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEF 355
T +++L Y + + K +L ++ KI V+ ++ + K +A+ F E
Sbjct: 365 TCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEET 424
Query: 356 KKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNF 415
++ + D T AM ++ V K +++ M LS Y ++ +++ +N
Sbjct: 425 ERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNV 484
Query: 416 RKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTF 475
+E R + + G+ PD S N ++ Y R +AK + ++ D+ Y T
Sbjct: 485 DCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTA 543
Query: 476 VATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHL--REEAYNFVHNLSSL 533
+ Y M EA ++ M ++ D ++ + +H+ + + + V N+S L
Sbjct: 544 MRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAE---SMHIVNKHDKHEAVLNVSQL 600
Query: 534 DL 535
D+
Sbjct: 601 DV 602
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 113/498 (22%), Positives = 205/498 (41%), Gaps = 15/498 (3%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
MK++ + + ++ C + A E F + GL PD + N +L++Y +
Sbjct: 459 MKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNL 517
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQM-VEKHIKPDVYTYT 123
++A +KQ+ I Y + + Y ++G++ EA +L +M E +K + + T
Sbjct: 518 GEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQT 577
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
S + K D+ E + ++ ++ + G E + +
Sbjct: 578 LAESMHIVNKHDK------HEAVLNVSQLDVMALGLMLNLRLKEGNLNETKAILNLMFKT 631
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
V N +++ F + G S+ + + R G E ET TLI+ Y R +A
Sbjct: 632 DLGSSAV--NRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEA 689
Query: 244 RAVYKRMLEAG--VTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL 301
+ +Y L AG TP S +++ A R G E + + E C P VT S L+
Sbjct: 690 KRLY---LAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILV 746
Query: 302 HAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIP 361
+A N + + ++ I V TL+ + L A + G+P
Sbjct: 747 NALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVP 806
Query: 362 HDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMI 421
I T N M+S+YGR + K +I SG L Y +++ + + ++ +
Sbjct: 807 CSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSL 866
Query: 422 LREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAA 481
E+ +KGI+P SYN+++ + E +L M+ D+ TY T + YA
Sbjct: 867 FSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAE 926
Query: 482 NSMFGEAIGVVQCMIKQG 499
+S F EA + + ++G
Sbjct: 927 SSQFAEAEKTITLVKEKG 944
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 110/542 (20%), Positives = 226/542 (41%), Gaps = 36/542 (6%)
Query: 2 LMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGK 61
++M G PD T++ + L ++ ++ + YN +L K
Sbjct: 211 FLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQK 270
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYT 121
+ +++ +M G PP+ TYT ++S+Y + G EEAL+ +M P+ T
Sbjct: 271 KSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVT 330
Query: 122 YTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK 181
Y++++S V A E A+ ++E+MR+ G P+ T ++ +Y + + +F +++
Sbjct: 331 YSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADME 390
Query: 182 ACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFD 241
+ D V ++ ++G+ GL + +F+E +R + + +T+ + + G+
Sbjct: 391 RNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVV 450
Query: 242 QARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL 301
+A V + M + Y +L A+ + +E+ + P+ + + +L
Sbjct: 451 KALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDML 509
Query: 302 HAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKK---- 357
+ Y EK ++I ++ L KT + V K +AEA+ ++ +
Sbjct: 510 NLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARV 569
Query: 358 -----------------RGIPH---------DITTLNAMLSLYGRKKLVAKTNKILKFMY 391
+ H D+ L ML+L ++ + +T IL M+
Sbjct: 570 KDNRFVQTLAESMHIVNKHDKHEAVLNVSQLDVMALGLMLNLRLKEGNLNETKAILNLMF 629
Query: 392 ESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMT 451
++ L N ++ R + K+EMI I+ G+ + + +I Y R K+
Sbjct: 630 KT--DLGSSAVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLK 687
Query: 452 EAKRI-LNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSI 510
EAKR+ L + P V+ + + Y +A G+ ++GC P T + +
Sbjct: 688 EAKRLYLAAGESKTPGKSVI--RSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISIL 745
Query: 511 VD 512
V+
Sbjct: 746 VN 747
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 131/288 (45%), Gaps = 1/288 (0%)
Query: 25 RAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSI 84
R G L E+A LF E G P VT + L++ + +EA + + +
Sbjct: 716 RCGWL-EDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDT 774
Query: 85 VTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEE 144
V Y +LI A + G L+ A E+ +M + + TY T++S + + + A+ +F
Sbjct: 775 VGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSN 834
Query: 145 MRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGL 204
R +G + + +I YG G +E +F E++ P ++N ++ + + L
Sbjct: 835 ARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRL 894
Query: 205 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNA 264
EV + + M+R G + T+ TLI Y+ F +A + E G+ S +++
Sbjct: 895 HHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSS 954
Query: 265 VLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEK 312
+L+AL + G+ E++E+ +M P+ ++L Y + EK
Sbjct: 955 LLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEK 1002
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/428 (21%), Positives = 177/428 (41%), Gaps = 42/428 (9%)
Query: 90 LISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVF---EEMR 146
+IS++VR+G + +A + + ++ ++ + T TL++ + K + A R++ E +
Sbjct: 641 VISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESK 700
Query: 147 TAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDS 206
T P ++I Y G + +F E C P VT + L+ G
Sbjct: 701 T----PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHR 756
Query: 207 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVL 266
E + + + +NTLI A G A +Y+RM +GV + TYN ++
Sbjct: 757 EAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMI 816
Query: 267 AALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKIT 326
+ RG +++ ++ S +E Y++++ Y G GK
Sbjct: 817 SVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKG---------------GK-- 859
Query: 327 THAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKI 386
++EA F E +K+GI + N M+ + +L + +++
Sbjct: 860 ------------------MSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDEL 901
Query: 387 LKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCR 446
L+ M +G L Y +L+ +++ + F ++E + + EKGI ++ ++ A +
Sbjct: 902 LQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVK 961
Query: 447 NGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNT 506
G M EA+R +M + PD T + Y + I + MI+ + D+
Sbjct: 962 AGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDDRFV 1021
Query: 507 YNSIVDWY 514
+ + D Y
Sbjct: 1022 SSVVEDLY 1029
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 137/329 (41%), Gaps = 37/329 (11%)
Query: 47 PDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALEL 106
P +++D Y + ++A + + +G P VT + L++A G EA +
Sbjct: 702 PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHI 761
Query: 107 KNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGD 166
+EK+I+ D Y TL+ + A K + A ++E M T+G +I T+N +I +YG
Sbjct: 762 SRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYG- 820
Query: 167 RGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERET 226
RG+ LD + +F +R+G + +
Sbjct: 821 RGL---------------------------------QLDKAIE-IFSNARRSGLYLDEKI 846
Query: 227 FNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEME 286
+ +I Y + G +A +++ M + G+ P +YN ++ A L + +++L ME
Sbjct: 847 YTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAME 906
Query: 287 -NGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFL 345
NGRC + TY +L+ YA +F + + I +L+ K +
Sbjct: 907 RNGRC-TDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMM 965
Query: 346 AEAEHAFLEFKKRGIPHDITTLNAMLSLY 374
EAE + + + GI D +L Y
Sbjct: 966 EEAERTYCKMSEAGISPDSACKRTILKGY 994
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 127/266 (47%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ M+ +G P T + L++ + EA + + D V YN L+
Sbjct: 726 LFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAML 785
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
++ + + A E+ ++M + G P SI TY ++IS Y R L++A+E+ + + D
Sbjct: 786 EAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEK 845
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
YT ++ + K A+ +F EM+ G KP ++N ++K+ + E+ ++ + +
Sbjct: 846 IYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAM 905
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ D+ T+ TL+ V+ ++ +E +K G F++L+SA + G
Sbjct: 906 ERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMM 965
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVL 266
++A Y +M EAG++PD + +L
Sbjct: 966 EEAERTYCKMSEAGISPDSACKRTIL 991
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 136/320 (42%), Gaps = 40/320 (12%)
Query: 44 GLRPDMVTYNALLDVYGKSRRPKEAMEV-LKQMESRGFPPSIVTYTSLISAYVRDGLLEE 102
GLR + T L+ VYG+ + KEA + L ES+ S++ S+I AYVR G LE+
Sbjct: 665 GLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESKTPGKSVIR--SMIDAYVRCGWLED 722
Query: 103 ALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIK 162
A L F E GC P T + L+
Sbjct: 723 AYGL-----------------------------------FMESAEKGCDPGAVTISILVN 747
Query: 163 MYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVP 222
+RG E + + D V +NTL+ + G S +++ M +G
Sbjct: 748 ALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPC 807
Query: 223 ERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVL 282
+T+NT+IS Y R D+A ++ +G+ D Y ++ +GG ++ +
Sbjct: 808 SIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLF 867
Query: 283 SEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEI-YSGKITTHAVLLKTLVLVNSK 341
SEM+ KP +Y+ ++ A + +++ L + + +G+ T + L TL+ V ++
Sbjct: 868 SEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYL-TLIQVYAE 926
Query: 342 FDFLAEAEHAFLEFKKRGIP 361
AEAE K++GIP
Sbjct: 927 SSQFAEAEKTITLVKEKGIP 946
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/269 (18%), Positives = 105/269 (39%), Gaps = 1/269 (0%)
Query: 240 FDQARAVYKRM-LEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYS 298
+ Q R + M L+ P + Y VL + G + +E+ EM C+P+ V
Sbjct: 168 WRQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACG 227
Query: 299 SLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKR 358
++L YA M + + +I + ++ K F + +LE +
Sbjct: 228 TMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEE 287
Query: 359 GIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKS 418
G+P + T ++S Y ++ + K M GF Y+S++ L + ++ K+
Sbjct: 288 GVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKA 347
Query: 419 EMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVAT 478
+ ++ +GI P + ++ Y + +A + +M+ D V +
Sbjct: 348 IGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRI 407
Query: 479 YAANSMFGEAIGVVQCMIKQGCKPDQNTY 507
Y +F +A + + + D+ TY
Sbjct: 408 YGKLGLFHDAQSMFEETERLNLLADEKTY 436
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 116/510 (22%), Positives = 227/510 (44%), Gaps = 35/510 (6%)
Query: 19 TLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESR 78
+++ C L ++ ++ + +G +++T N L+D+Y K R P A +V M R
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 79 GFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLS--GFVNAKKDE 136
++V++++L+S +V +G L+ +L L ++M + I P+ +T++T L G +NA +
Sbjct: 71 ----NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 137 LAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLL 196
L + F G + + N+L+ MY G E KVF+ I +++WN ++
Sbjct: 127 LQIHGF--CLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI----VDRSLISWNAMI 180
Query: 197 AVFGQNGLDSEVSGVFKEMKRAGFV--PERETFNTLISAYSRCGSFDQARAVYKRMLEAG 254
A F G S+ F M+ A P+ T +L+ A S G + ++ ++ +G
Sbjct: 181 AGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSG 240
Query: 255 V-TPDLSTYNAVLAAL-ARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEK 312
P +T L L + G + K +++ + +++SSL+ YA EF +
Sbjct: 241 FHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK----EKTMISWSSLILGYAQEGEFVE 296
Query: 313 MNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLS 372
L + + + L +++ V + F L + + K + + LN+++
Sbjct: 297 AMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVD 356
Query: 373 LYGRKKLVAKTNKILKFMYES---GFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKG 429
+Y + LV + K M +T+ + GY H + KS I E+L
Sbjct: 357 MYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGK----HGLGK---KSVRIFYEMLRHN 409
Query: 430 IEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPV-PDVVTYNTFVATYAANSMFGEA 488
IEPD + Y V+ A +G + E + + +++ + + P V Y V EA
Sbjct: 410 IEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEA 469
Query: 489 IGVVQCMIKQGCKPDQNTYNSIVDWYCKLH 518
++ M KP+ + +++ C++H
Sbjct: 470 KHLIDTM---PIKPNVGIWQTLLS-LCRVH 495
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 161/372 (43%), Gaps = 61/372 (16%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ +M QG+ P+ TF+T + C + E+ L++ G + N+L+D+Y
Sbjct: 94 LFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYS 153
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIK--PD 118
K R EA +V +++ R S++++ ++I+ +V G +AL+ M E +IK PD
Sbjct: 154 KCGRINEAEKVFRRIVDR----SLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPD 209
Query: 119 VYTYTTLL-----SGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEM 173
+T T+LL +G + A K V C + +L+ +Y G
Sbjct: 210 EFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFH---CPSSATITGSLVDLYVKCGYLFSA 266
Query: 174 GKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKR---------------- 217
K F +IK +++W++L+ + Q G E G+FK ++
Sbjct: 267 RKAFDQIK----EKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGV 322
Query: 218 -AGFVPERE------------------TFNTLISAYSRCGSFDQARAVYKRMLEAGVTPD 258
A F R+ N+++ Y +CG D+A + M D
Sbjct: 323 FADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEM----QLKD 378
Query: 259 LSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAE 318
+ ++ V+ + GL ++S ++ EM +P+EV Y ++L A ++ ++ E
Sbjct: 379 VISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKE----GE 434
Query: 319 EIYSGKITTHAV 330
E++S + TH +
Sbjct: 435 ELFSKLLETHGI 446
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 141/297 (47%), Gaps = 22/297 (7%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLR-PDMVTY-NALLDVYGKSRRPKEAM 69
PD T +L+ C + + ++ + +G P T +L+D+Y K A
Sbjct: 208 PDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSAR 267
Query: 70 EVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGF 129
+ Q++ + ++++++SLI Y ++G EA+ L ++ E + + D + ++++ F
Sbjct: 268 KAFDQIKEK----TMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVF 323
Query: 130 VNAKKDELAMRVFEEMRTAGCK-PN---ICTFNALIKMYGDRGMFAEMGKVFKEIKACQC 185
D +R ++M+ K P+ N+++ MY G+ E K F E++
Sbjct: 324 A----DFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQL--- 376
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
D+++W ++ +G++GL + +F EM R P+ + ++SA S G +
Sbjct: 377 -KDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEE 435
Query: 246 VYKRMLEA-GVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL 301
++ ++LE G+ P + Y V+ L R G ++++ ++ M KPN + +LL
Sbjct: 436 LFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMP---IKPNVGIWQTLL 489
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 86/171 (50%), Gaps = 11/171 (6%)
Query: 16 TFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQM 75
N+++ L +EA + F E++L D++++ ++ YGK K+++ + +M
Sbjct: 350 VLNSVVDMYLKCGLVDEAEKCFAEMQL----KDVISWTVVITGYGKHGLGKKSVRIFYEM 405
Query: 76 ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKH-IKPDVYTYTTLLSGFVNAKK 134
P V Y +++SA G+++E EL ++++E H IKP V Y ++ A +
Sbjct: 406 LRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGR 465
Query: 135 DELAMRVFEEMRTAGCKPNICTFNALI---KMYGDRGMFAEMGKVFKEIKA 182
+ A + + M KPN+ + L+ +++GD + E+GK+ I A
Sbjct: 466 LKEAKHLIDTMPI---KPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDA 513
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 145/300 (48%), Gaps = 8/300 (2%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVL 72
DL FN +IS S +EAL L +++KL G++PD++T+NAL+ + R ++ E+L
Sbjct: 182 DLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEIL 241
Query: 73 KQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNA 132
+ M G+ P +V++TS+IS V + E+A + QM+ + P+ T TLL
Sbjct: 242 ELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTL 301
Query: 133 KKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTW 192
+ + G + + +AL+ MYG G +E +F++ VT+
Sbjct: 302 AYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTP----KKTTVTF 357
Query: 193 NTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLE 252
N+++ + +GL + +F +M+ G + TF +++A S G D + ++ M
Sbjct: 358 NSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQN 417
Query: 253 A-GVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE 311
+ P L Y ++ L R G ++ +++ M R +P+ + +LL A N E
Sbjct: 418 KYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAM---RMEPDLFVWGALLAACRNHGNME 474
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 144/317 (45%), Gaps = 15/317 (4%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
++ DMK G+ PD+ T+N LIS E+ E+ E + L G +PD+V++ +++
Sbjct: 205 LVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLV 264
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ + ++A + KQM + G P+ T +L+ A ++ E+ V ++ +
Sbjct: 265 HNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGF 324
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
+ LL + AM +F + K TFN++I Y + G+ + ++F ++
Sbjct: 325 VRSALLDMYGKCGFISEAMILFRKTP----KKTTVTFNSMIFCYANHGLADKAVELFDQM 380
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMK-RAGFVPERETFNTLISAYSRCGS 239
+A D +T+ +L GL +F M+ + VP E + ++ R G
Sbjct: 381 EATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGK 440
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGG---LWEQSEKVLSEMENGRCKPNEVT 296
+A + K M + PDL + A+LAA G L + K L+E+E N +
Sbjct: 441 LVEAYEMIKAM---RMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPEN-SGNGLL 496
Query: 297 YSSLLHAYANGKEFEKM 313
+SL YAN +E +
Sbjct: 497 LTSL---YANAGSWESV 510
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 135/345 (39%), Gaps = 78/345 (22%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLR-------------------------- 46
D+ +I C Y+E+L+ F E+ GL+
Sbjct: 81 DISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIH 140
Query: 47 ---------PDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRD 97
D ++L+D+Y K A +V + + +V + ++IS Y +
Sbjct: 141 CLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQ----DLVVFNAMISGYANN 196
Query: 98 GLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTF 157
+EAL L M IKPDV T+ L+SGF + + +E + E M G KP++ ++
Sbjct: 197 SQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSW 256
Query: 158 NALI----------------KMYGDRGMFAEMGKVFKEIKACQC-----------SPDIV 190
++I K G++ + + AC +V
Sbjct: 257 TSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVV 316
Query: 191 TW--------NTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
T + LL ++G+ G SE +F++ + V TFN++I Y+ G D+
Sbjct: 317 TGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTV----TFNSMIFCYANHGLADK 372
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMEN 287
A ++ +M G D T+ A+L A + GL + + + M+N
Sbjct: 373 AVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQN 417
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 106/249 (42%), Gaps = 12/249 (4%)
Query: 230 LISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGR 289
L++ Y CG AR V+ M + D+S ++ A AR G +++S EM
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPK----RDISGCVVMIGACARNGYYQESLDFFREMYKDG 112
Query: 290 CKPNEVTYSSLLHAYAN--GKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAE 347
K + SLL A N +EF KM + + + A ++ +L+ + SKF +
Sbjct: 113 LKLDAFIVPSLLKASRNLLDREFGKM--IHCLVLKFSYESDAFIVSSLIDMYSKFGEVGN 170
Query: 348 AEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMY 407
A F + ++ D+ NAM+S Y + ++K M G + +N+L+
Sbjct: 171 ARKVFSDLGEQ----DLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALIS 226
Query: 408 LHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVP 467
S RN K IL + G +PD++S+ +I N + +A +M P
Sbjct: 227 GFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYP 286
Query: 468 DVVTYNTFV 476
+ T T +
Sbjct: 287 NSATIITLL 295
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 99/469 (21%), Positives = 174/469 (37%), Gaps = 90/469 (19%)
Query: 83 SIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVF 142
SI +Y LI A RD L L +V I L++ +V K A +VF
Sbjct: 15 SIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVF 74
Query: 143 EEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI---------------------- 180
+EM K +I +I G + E F+E+
Sbjct: 75 DEMP----KRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNL 130
Query: 181 ------KACQC-------SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETF 227
K C D ++L+ ++ + G VF ++ V F
Sbjct: 131 LDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLV----VF 186
Query: 228 NTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMEN 287
N +IS Y+ D+A + K M G+ PD+ T+NA+++ + E+ ++L M
Sbjct: 187 NAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCL 246
Query: 288 GRCKPNEVTYSS----LLHAYANGKEFEKMNAL--------------------------- 316
KP+ V+++S L+H + N K F+ +
Sbjct: 247 DGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKH 306
Query: 317 AEEIYSGKITT----HAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDIT-TLNAML 371
+EI+ + T H + L+ + K F++EA F R P T T N+M+
Sbjct: 307 GKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILF-----RKTPKKTTVTFNSMI 361
Query: 372 SLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYL--HSRTRNFRKSEMILREILEKG 429
Y L K ++ M +G L + +++ H+ + ++ +L + +
Sbjct: 362 FCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYR- 420
Query: 430 IEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVAT 478
I P L Y ++ R GK+ EA ++ M+ PD+ + +A
Sbjct: 421 IVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRME---PDLFVWGALLAA 466
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 70/141 (49%), Gaps = 10/141 (7%)
Query: 386 ILKFMYES-GFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAY 444
+LKF YES F +S SL+ ++S+ + + ++ E+ DL+ +N +I Y
Sbjct: 143 VLKFSYESDAFIVS-----SLIDMYSKFGEVGNARKVFSDLGEQ----DLVVFNAMISGY 193
Query: 445 CRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQ 504
N + EA ++ +MK PDV+T+N ++ ++ + +++ M G KPD
Sbjct: 194 ANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDV 253
Query: 505 NTYNSIVDWYCKLHLREEAYN 525
++ SI+ E+A++
Sbjct: 254 VSWTSIISGLVHNFQNEKAFD 274
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 154/341 (45%), Gaps = 55/341 (16%)
Query: 16 TFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQM 75
TF +L+ C S +EE ++ +I G D+ N+L++ Y + K A + ++
Sbjct: 117 TFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRI 176
Query: 76 ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKD 135
P V++ S+I YV+ G ++ AL L +M EK + ++TT++SG+V A +
Sbjct: 177 PE----PDDVSWNSVIKGYVKAGKMDIALTLFRKMAEK----NAISWTTMISGYVQADMN 228
Query: 136 ELAMRVFEEMRTAGCKP-NICTFNA----------------------------------L 160
+ A+++F EM+ + +P N+ NA L
Sbjct: 229 KEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVL 288
Query: 161 IKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGF 220
I MY G E +VFK IK + W L++ + +G E F EM++ G
Sbjct: 289 IDMYAKCGEMEEALEVFKNIK----KKSVQAWTALISGYAYHGHGREAISKFMEMQKMGI 344
Query: 221 VPERETFNTLISAYSRCGSFDQARAVYKRM-LEAGVTPDLSTYNAVLAALARGGLWEQSE 279
P TF +++A S G ++ + ++ M + + P + Y ++ L R GL ++++
Sbjct: 345 KPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAK 404
Query: 280 KVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEI 320
+ + EM KPN V + +LL A K E L EEI
Sbjct: 405 RFIQEMP---LKPNAVIWGALLKACRIHKNIE----LGEEI 438
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/383 (19%), Positives = 168/383 (43%), Gaps = 24/383 (6%)
Query: 116 KPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGK 175
+PD + + ++ GF + + E ++ +++ M + N TF +L+K + F E +
Sbjct: 77 RPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQ 136
Query: 176 VFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYS 235
+ +I D+ N+L+ + G +F + P+ ++N++I Y
Sbjct: 137 IHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPE----PDDVSWNSVIKGYV 192
Query: 236 RCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEV 295
+ G D A ++++M E ++ +++ + + +++ ++ EM+N +P+ V
Sbjct: 193 KAGKMDIALTLFRKMAEKNAI----SWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNV 248
Query: 296 TYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEF 355
+ ++ L A A E+ + + +I +VL L+ + +K + EA F
Sbjct: 249 SLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNI 308
Query: 356 KKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKF--MYESGFTLSLPGYNSLMYLHSRTR 413
KK+ + T L + + +G + I KF M + G ++ + +++ S T
Sbjct: 309 KKKSV-QAWTALISGYAYHGHGR-----EAISKFMEMQKMGIKPNVITFTAVLTACSYTG 362
Query: 414 NFRKSEMILREI-LEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPV-PDVVT 471
+ ++I + + ++P + Y ++ R G + EAKR + EM P+ P+ V
Sbjct: 363 LVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEM----PLKPNAVI 418
Query: 472 YNTFVAT--YAANSMFGEAIGVV 492
+ + N GE IG +
Sbjct: 419 WGALLKACRIHKNIELGEEIGEI 441
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 94/198 (47%), Gaps = 10/198 (5%)
Query: 1 MLMDMKSQGLAPDLCTF-NTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+ +M++ + PD + N L +C + G+L E+ + + +R D V L+D+Y
Sbjct: 234 LFHEMQNSDVEPDNVSLANALSACAQLGAL-EQGKWIHSYLNKTRIRMDSVLGCVLIDMY 292
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
K +EA+EV K ++ + S+ +T+LIS Y G EA+ +M + IKP+V
Sbjct: 293 AKCGEMEEALEVFKNIKKK----SVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNV 348
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEM-RTAGCKPNICTFNALIKMYGDRGMFAEMGKVFK 178
T+T +L+ E +F M R KP I + ++ + G G+ E + +
Sbjct: 349 ITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQ 408
Query: 179 EIKACQCSPDIVTWNTLL 196
E+ P+ V W LL
Sbjct: 409 EMPL---KPNAVIWGALL 423
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 116/258 (44%), Gaps = 12/258 (4%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV 71
PD ++N++I + AL LF ++ + +++ ++ Y ++ KEA+++
Sbjct: 179 PDDVSWNSVIKGYVKAGKMDIALTLFRKMA----EKNAISWTTMISGYVQADMNKEALQL 234
Query: 72 LKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVN 131
+M++ P V+ + +SA + G LE+ + + + + I+ D L+ +
Sbjct: 235 FHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAK 294
Query: 132 AKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVT 191
+ E A+ VF+ ++ K ++ + ALI Y G E F E++ P+++T
Sbjct: 295 CGEMEEALEVFKNIK----KKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVIT 350
Query: 192 WNTLLAVFGQNGLDSEVSGVFKEMKRA-GFVPERETFNTLISAYSRCGSFDQARAVYKRM 250
+ +L GL E +F M+R P E + ++ R G D+A+ + M
Sbjct: 351 FTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEM 410
Query: 251 LEAGVTPDLSTYNAVLAA 268
+ P+ + A+L A
Sbjct: 411 ---PLKPNAVIWGALLKA 425
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/345 (17%), Positives = 144/345 (41%), Gaps = 13/345 (3%)
Query: 187 PDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAV 246
PD WN ++ F + +++ M + TF +L+ A S +F++ +
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 247 YKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYAN 306
+ ++ + G D+ N+++ + A G ++ + + + +P++V+++S++ Y
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIP----EPDDVSWNSVIKGYVK 193
Query: 307 GKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITT 366
+ + +A ++ +A+ T++ + D EA F E + + D +
Sbjct: 194 AGKMD----IALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVS 249
Query: 367 LNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREIL 426
L LS + + + I ++ ++ + L+ ++++ ++ + + I
Sbjct: 250 LANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK 309
Query: 427 EKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFG 486
+K ++ ++ +I Y +G EA EM+ P+V+T+ + + +
Sbjct: 310 KKSVQ----AWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVE 365
Query: 487 EAIGVVQCMIKQ-GCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
E + M + KP Y IVD + L +EA F+ +
Sbjct: 366 EGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEM 410
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 133/273 (48%), Gaps = 14/273 (5%)
Query: 32 EALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLI 91
+A ++F+E+ L D+ +NALL YGK EA +L+ M + + V++T +I
Sbjct: 169 DARKMFDEM----LVKDVNVWNALLAGYGKVGEMDEARSLLEMMPC--WVRNEVSWTCVI 222
Query: 92 SAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCK 151
S Y + G EA+E+ +M+ ++++PD T +LS + EL R+ + G
Sbjct: 223 SGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMN 282
Query: 152 PNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGV 211
+ NA+I MY G + VF+ C ++VTW T++A +G +E +
Sbjct: 283 RAVSLNNAVIDMYAKSGNITKALDVFE----CVNERNVVTWTTIIAGLATHGHGAEALAM 338
Query: 212 FKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEA-GVTPDLSTYNAVLAALA 270
F M +AG P TF ++SA S G D + ++ M G+ P++ Y ++ L
Sbjct: 339 FNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLG 398
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
R G ++++V+ M K N + SLL A
Sbjct: 399 RAGKLREADEVIKSMP---FKANAAIWGSLLAA 428
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 115/260 (44%), Gaps = 25/260 (9%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M + + PD T ++S C E + + G+ + NA++D+Y KS
Sbjct: 241 MLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGN 300
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+A++V + + R ++VT+T++I+ G EAL + N+MV+ ++P+ T+
Sbjct: 301 ITKALDVFECVNER----NVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIA 356
Query: 125 LLSGFVNAKKDELAMRVFEEMRTA-GCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
+LS + +L R+F MR+ G PNI + +I + G G E +V IK+
Sbjct: 357 ILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEV---IKSM 413
Query: 184 QCSPDIVTWNTLLAV--------FGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYS 235
+ W +LLA G+ L + E +G + L + YS
Sbjct: 414 PFKANAAIWGSLLAASNVHHDLELGERALSELIK---LEPNNSG------NYMLLANLYS 464
Query: 236 RCGSFDQARAVYKRMLEAGV 255
G +D++R + M GV
Sbjct: 465 NLGRWDESRMMRNMMKGIGV 484
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 134/312 (42%), Gaps = 13/312 (4%)
Query: 116 KPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGK 175
KPD +T+ +L V ++ ++ G ++ LI+MY G + K
Sbjct: 113 KPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARK 172
Query: 176 VFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYS 235
+F E+ D+ WN LLA +G+ G E + + M +V ++ +IS Y+
Sbjct: 173 MFDEMLV----KDVNVWNALLAGYGKVGEMDEARSLLEMMP--CWVRNEVSWTCVISGYA 226
Query: 236 RCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEV 295
+ G +A V++RML V PD T AVL+A A G E E++ S +++
Sbjct: 227 KSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVS 286
Query: 296 TYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEF 355
++++ YA K + E + + T ++ L + AEA F
Sbjct: 287 LNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGL----ATHGHGAEALAMFNRM 342
Query: 356 KKRGI-PHDITTLNAMLSLYGRKKLVAKTNKILKFMYES-GFTLSLPGYNSLMYLHSRTR 413
K G+ P+D+T + A+LS V ++ M G ++ Y ++ L R
Sbjct: 343 VKAGVRPNDVTFI-AILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAG 401
Query: 414 NFRKSEMILREI 425
R+++ +++ +
Sbjct: 402 KLREADEVIKSM 413
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/337 (18%), Positives = 138/337 (40%), Gaps = 43/337 (12%)
Query: 176 VFKEIKACQCSPDIVTWNTLLAV--------FGQNGLDSEVSGVFKEMKRAGFVPERETF 227
V++++ A PD T+ +L + FG+ + ++ GF
Sbjct: 103 VYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQ--------IHGQVVVFGFDSSVHVV 154
Query: 228 NTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMEN 287
LI Y CG AR ++ ML D++ +NA+LA + G +++ +L M
Sbjct: 155 TGLIQMYFSCGGLGDARKMFDEML----VKDVNVWNALLAGYGKVGEMDEARSLLEMMP- 209
Query: 288 GRCKP-NEVTYSSLLHAYANGKE-------FEKMNALAEEIYSGKITTHAVLLKTLVLVN 339
C NEV+++ ++ YA F++M L E + ++T AVL
Sbjct: 210 --CWVRNEVSWTCVISGYAKSGRASEAIEVFQRM--LMENVEPDEVTLLAVLSAC----- 260
Query: 340 SKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSL 399
+ L E RG+ ++ NA++ +Y + + K + + + E ++
Sbjct: 261 ADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNER----NV 316
Query: 400 PGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNE 459
+ +++ + + ++ + +++ G+ P+ +++ ++ A G + KR+ N
Sbjct: 317 VTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNS 376
Query: 460 MKDPAPV-PDVVTYNTFVATYAANSMFGEAIGVVQCM 495
M+ + P++ Y + EA V++ M
Sbjct: 377 MRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSM 413
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 125/268 (46%), Gaps = 9/268 (3%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEI--KLAGLRPDMVTYNALLDVYGKSRRPKEAM- 69
DL N+++ + ++ + ++LF+ I RP T+ LL R P ++
Sbjct: 84 DLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLS--HACRAPDSSIS 141
Query: 70 ---EVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLL 126
VL M + G P VT + + G ++EA +L ++ EKH PD YTY LL
Sbjct: 142 NVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLL 201
Query: 127 SGFVNAKKDELAMRVFEEMRTA-GCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQC 185
K + +EMR KP++ +F LI + E + ++
Sbjct: 202 KHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGF 261
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
PD +NT++ F SE GV+K+MK G P++ T+NTLI S+ G ++AR
Sbjct: 262 KPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARM 321
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGG 273
K M++AG PD +TY +++ + R G
Sbjct: 322 YLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 3/194 (1%)
Query: 5 MKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M + GL PD T + + S C G + +EA +L +E+ PD TYN LL K +
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRV-DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCK 208
Query: 64 RPKEAMEVLKQM-ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
E + +M + P +V++T LI L EA+ L +++ KPD + Y
Sbjct: 209 DLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLY 268
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
T++ GF K A+ V+++M+ G +P+ T+N LI G E K +
Sbjct: 269 NTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVD 328
Query: 183 CQCSPDIVTWNTLL 196
PD T+ +L+
Sbjct: 329 AGYEPDTATYTSLM 342
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 66/120 (55%), Gaps = 2/120 (1%)
Query: 10 LAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEA 68
+ PDL +F LI + C + +L EA+ L ++ AG +PD YN ++ + + EA
Sbjct: 226 VKPDLVSFTILIDNVCNSKNL-REAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEA 284
Query: 69 MEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSG 128
+ V K+M+ G P +TY +LI + G +EEA MV+ +PD TYT+L++G
Sbjct: 285 VGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNG 344
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 120/287 (41%), Gaps = 10/287 (3%)
Query: 170 FAEMGKVFKEIKACQCSP-DIVTWNTLLAVFGQNGLDSEVSGVFKEM--KRAGFVPERET 226
++ +F I A P D+ N++L +G + ++ +F+ + + F P R T
Sbjct: 65 LSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRST 124
Query: 227 FNTLISAYSRC--GSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSE 284
F L+S R S V M+ G+ PD T + + +L G ++++ ++ E
Sbjct: 125 FLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKE 184
Query: 285 MENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSG-KITTHAVLLKTLV--LVNSK 341
+ P+ TY+ LL K+ + +E+ + V L+ + NSK
Sbjct: 185 LTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSK 244
Query: 342 FDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPG 401
L EA + + G D N ++ + ++ + K M E G
Sbjct: 245 N--LREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQIT 302
Query: 402 YNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNG 448
YN+L++ S+ ++ M L+ +++ G EPD +Y ++ CR G
Sbjct: 303 YNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%)
Query: 412 TRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVT 471
++N R++ ++ ++ G +PD YN ++ +C K +EA + +MK+ PD +T
Sbjct: 243 SKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQIT 302
Query: 472 YNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
YNT + + EA ++ M+ G +PD TY S+++ C+
Sbjct: 303 YNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%)
Query: 430 IEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAI 489
++PDL+S+ I+I C + + EA +++++ + PD YNT + + S EA+
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 490 GVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEA 523
GV + M ++G +PDQ TYN+++ K EEA
Sbjct: 286 GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
++ + + G PD +NT++ S EA+ +++++K G+ PD +TYN L+
Sbjct: 252 LVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLS 311
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDG 98
K+ R +EA LK M G+ P TYTSL++ R G
Sbjct: 312 KAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 84/205 (40%), Gaps = 42/205 (20%)
Query: 360 IPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSE 419
IP D+ N++L YG +V T K+ + + +S PG ++ + L S S
Sbjct: 81 IPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFR-PGRSTFLILLSHACRAPDSS 139
Query: 420 M-----ILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYN- 473
+ +L ++ G+EPD ++ +I + + C G++ EAK ++ E+ + PD TYN
Sbjct: 140 ISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNF 199
Query: 474 ----------------------------------TFVATYAANSM-FGEAIGVVQCMIKQ 498
T + NS EA+ +V +
Sbjct: 200 LLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNA 259
Query: 499 GCKPDQNTYNSIVDWYCKLHLREEA 523
G KPD YN+I+ +C L EA
Sbjct: 260 GFKPDCFLYNTIMKGFCTLSKGSEA 284
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 114/527 (21%), Positives = 235/527 (44%), Gaps = 24/527 (4%)
Query: 10 LAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAM 69
+ PD +N+LIS +A ++FE ++ G R D+V+++A++ YG + R +A+
Sbjct: 93 IEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKR-DVVSWSAMMACYGNNGRELDAI 151
Query: 70 EVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEA-LELKNQMVEKHIKPDVYTYTTLLSG 128
+V + G P+ YT++I A + + L M H + DV +L+
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211
Query: 129 FVNAKKD-ELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSP 187
FV + E A +VF++M + N+ T+ +I G E + F ++
Sbjct: 212 FVKGENSFENAYKVFDKMS----ELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFES 267
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC---GSFDQAR 244
D T +++ + + S + R+G V + E +L+ Y++C GS D R
Sbjct: 268 DKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCR 325
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM-ENGRCKPNEVTYSSLLHA 303
V+ RM + V +S + + L ++ + SEM G +PN T+SS A
Sbjct: 326 KVFDRMEDHSV---MSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKA 382
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
N + + + + + +++ + +++ + K D + +A+ AF ++ +
Sbjct: 383 CGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK----N 438
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILR 423
+ + N L R + K+L + E +S + SL+ + + RK E I
Sbjct: 439 LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHS 498
Query: 424 EILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANS 483
++++ G+ + N +I Y + G + A R+ N M++ +V+++ + + +A +
Sbjct: 499 QVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMEN----RNVISWTSMITGFAKHG 554
Query: 484 MFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
+ MI++G KP++ TY +I+ + L E + +++
Sbjct: 555 FAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSM 601
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 129/287 (44%), Gaps = 10/287 (3%)
Query: 1 MLMDMKSQG-LAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+ +M +QG + P+ TF++ C S ++ + GL + N+++ ++
Sbjct: 359 LFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMF 418
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
KS R ++A + + + ++V+Y + + R+ E+A +L +++ E+ +
Sbjct: 419 VKSDRMEDAQRAFESLSEK----NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSA 474
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
+T+ +LLSG N ++ ++ G N NALI MY G +VF
Sbjct: 475 FTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNF 534
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
++ + ++++W +++ F ++G V F +M G P T+ ++SA S G
Sbjct: 535 ME----NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGL 590
Query: 240 FDQARAVYKRMLE-AGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM 285
+ + M E + P + Y ++ L R GL + + ++ M
Sbjct: 591 VSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTM 637
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 100/479 (20%), Positives = 195/479 (40%), Gaps = 62/479 (12%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVL 72
++ T+ +I+ C EA+ F ++ L+G D T +++ + E + +
Sbjct: 233 NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE----LENLSLG 288
Query: 73 KQMESRGFPPSIV--TYTSLISAYVR---DGLLEEALELKNQMVEKHIKPDVYTYTTLLS 127
KQ+ S +V SL+ Y + DG +++ ++ ++M E H V ++T L++
Sbjct: 289 KQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRM-EDH---SVMSWTALIT 344
Query: 128 GFV-NAKKDELAMRVFEEMRTAG-CKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQC 185
G++ N A+ +F EM T G +PN TF++ K G+ +GK
Sbjct: 345 GYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD-PRVGK---------- 393
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
V GQ FK G N++IS + + + A+
Sbjct: 394 -----------QVLGQ---------AFKR----GLASNSSVANSVISMFVKSDRMEDAQR 429
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA 305
++ + E +L +YN L R +EQ+ K+LSE+ + T++SLL A
Sbjct: 430 AFESLSE----KNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVA 485
Query: 306 NGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDIT 365
N K + ++ ++ + + L+ + SK + A F + R ++
Sbjct: 486 NVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENR----NVI 541
Query: 366 TLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREI 425
+ +M++ + + + + M E G + Y +++ S + +
Sbjct: 542 SWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSM 601
Query: 426 LE-KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANS 483
E I+P + Y ++ CR G +T+A +N M A DV+ + TF+ +S
Sbjct: 602 YEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQA---DVLVWRTFLGACRVHS 657
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 97/452 (21%), Positives = 191/452 (42%), Gaps = 50/452 (11%)
Query: 90 LISAYVRDGLLEEALELKNQMVEKHIKP-DVYTYTTLLSGFVNAKKDELAMRVFEEMRTA 148
LI ++ G L A+ + M I+P D T+++LL + A+ L V +
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 149 GCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEV 208
+P+ +N+LI +Y G A+ VF+ ++ D+V+W+ ++A +G NG + +
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG-KRDVVSWSAMMACYGNNGRELDA 150
Query: 209 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAG-VTPDLSTYNAVLA 267
VF E G VP + +I A S R +++ G D+ +++
Sbjct: 151 IKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLID 210
Query: 268 ALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITT 327
+G EN S +AY K F+KM+ L + T
Sbjct: 211 MFVKG-------------EN-----------SFENAY---KVFDKMSEL-------NVVT 236
Query: 328 HAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKIL 387
+++ + + F EA FL+ G D TL+++ S + ++ ++
Sbjct: 237 WTLMITRCM----QMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLH 292
Query: 388 KFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRN 447
+ SG + SL+ ++++ + S R++ ++ + ++S+ +I Y +N
Sbjct: 293 SWAIRSGLVDDVEC--SLVDMYAKC-SADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349
Query: 448 GKM-TEAKRILNEMKDPAPV-PDVVTYNTFVATYAANSMFGEAIG--VVQCMIKQGCKPD 503
+ TEA + +EM V P+ T+++ A A ++ +G V+ K+G +
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSS--AFKACGNLSDPRVGKQVLGQAFKRGLASN 407
Query: 504 QNTYNSIVDWYCKLHLREEAYNFVHNLSSLDL 535
+ NS++ + K E+A +LS +L
Sbjct: 408 SSVANSVISMFVKSDRMEDAQRAFESLSEKNL 439
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 161/356 (45%), Gaps = 18/356 (5%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+MK QGL D F +++ C E ++ I + + +AL+D+Y K +
Sbjct: 260 EMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCK 319
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
A V +M+ + ++V++T+++ Y + G EEA+++ M I PD YT
Sbjct: 320 CLHYAKTVFDRMKQK----NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLG 375
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
+S N E + + T+G + N+L+ +YG G + ++F E+
Sbjct: 376 QAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV- 434
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
D V+W +++ + Q G E +F +M + G P+ T +ISA SR G ++
Sbjct: 435 ---RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG 491
Query: 244 RAVYKRML-EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
+ +K M E G+ P + Y+ ++ +R G E++ + ++ M P+ + +++LL
Sbjct: 492 QRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP---FPPDAIGWTTLLS 548
Query: 303 AYANGKEFEKMNALAEEIYSGKITTHA----VLLKTLVLVNSKFDFLAEAEHAFLE 354
A N E AE + ++ H LL ++ K+D +A+ E
Sbjct: 549 ACRNKGNLEIGKWAAESLI--ELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMRE 602
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/509 (20%), Positives = 199/509 (39%), Gaps = 102/509 (20%)
Query: 17 FNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQME 76
+N+L+ A + E+AL+LF G+ D V++ A++ ++ KEA+E ++M+
Sbjct: 208 YNSLMGGLLACGMIEDALQLFR-----GMEKDSVSWAAMIKGLAQNGLAKEAIECFREMK 262
Query: 77 SRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDE 136
+G + S++ A G + E ++ ++ + + +Y + L+ + K
Sbjct: 263 VQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLH 322
Query: 137 LAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLL 196
A VF+ M+ ++V+W ++
Sbjct: 323 YAKTVFDRMK---------------------------------------QKNVVSWTAMV 343
Query: 197 AVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVT 256
+GQ G E +F +M+R+G P+ T ISA + S ++ + + + +G+
Sbjct: 344 VGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLI 403
Query: 257 PDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNAL 316
++ N+++ + G + S ++ +EM N R + V++++++ AYA
Sbjct: 404 HYVTVSNSLVTLYGKCGDIDDSTRLFNEM-NVR---DAVSWTAMVSAYA----------- 448
Query: 317 AEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGR 376
+F E F + + G+ D TL ++S R
Sbjct: 449 ------------------------QFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSR 484
Query: 377 KKLVAKTNKILKFMY-ESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLI 435
LV K + K M E G S+ Y+ ++ L SR+ E +R I PD I
Sbjct: 485 AGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRL---EEAMRFINGMPFPPDAI 541
Query: 436 SYNIVIYAYCRN------GKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAI 489
+ ++ A CRN GK I + PA Y + YA+ +
Sbjct: 542 GWTTLLSA-CRNKGNLEIGKWAAESLIELDPHHPA------GYTLLSSIYASKGKWDSVA 594
Query: 490 GVVQCMIKQGCKPDQNTYNSIVDWYCKLH 518
+ + M ++ K + S + W KLH
Sbjct: 595 QLRRGMREKNVKKEPG--QSWIKWKGKLH 621
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 117/257 (45%), Gaps = 11/257 (4%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ +DM+ G+ PD T IS C S EE + + +GL + N+L+ +YG
Sbjct: 358 IFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYG 417
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K ++ + +M R V++T+++SAY + G E ++L ++MV+ +KPD
Sbjct: 418 KCGDIDDSTRLFNEMNVR----DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGV 473
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTA-GCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
T T ++S A E R F+ M + G P+I ++ +I ++ G E +
Sbjct: 474 TLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEE---AMRF 530
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISA-YSRCG 238
I PD + W TLL+ G + E+ G + P TL+S+ Y+ G
Sbjct: 531 INGMPFPPDAIGWTTLLSACRNKG-NLEI-GKWAAESLIELDPHHPAGYTLLSSIYASKG 588
Query: 239 SFDQARAVYKRMLEAGV 255
+D + + M E V
Sbjct: 589 KWDSVAQLRRGMREKNV 605
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 104/496 (20%), Positives = 201/496 (40%), Gaps = 44/496 (8%)
Query: 47 PDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALEL 106
P+ YN ++ Y + A V ++ P++ ++ +L+ AY + GL+ E
Sbjct: 39 PETFLYNNIVHAYALMKSSTYARRVFDRIPQ----PNLFSWNNLLLAYSKAGLISEM--- 91
Query: 107 KNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEM-RTAGCKPNICTFNALIKMYG 165
EK D T+ L+ G+ + A++ + M R T ++K+
Sbjct: 92 -ESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSS 150
Query: 166 DRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERE 225
G + ++ ++ ++ + LL ++ G S+ VF + +R
Sbjct: 151 SNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLD------DRN 204
Query: 226 T--FNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLS 283
T +N+L+ CG + A +++ G+ D ++ A++ LA+ GL +++ +
Sbjct: 205 TVMYNSLMGGLLACGMIEDALQLFR-----GMEKDSVSWAAMIKGLAQNGLAKEAIECFR 259
Query: 284 EMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFD 343
EM+ K ++ + S+L A + + I H + L+ + K
Sbjct: 260 EMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCK 319
Query: 344 FLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYN 403
L A+ F K++ ++ + AM+ YG+ + KI M SG P +
Sbjct: 320 CLHYAKTVFDRMKQK----NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID---PDHY 372
Query: 404 SLMYLHSRTRNFRKSEMILREILEKGIEPDLISY----NIVIYAYCRNGKMTEAKRILNE 459
+L S N E + K I LI Y N ++ Y + G + ++ R+ NE
Sbjct: 373 TLGQAISACANVSSLEE-GSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNE 431
Query: 460 MKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQC---MIKQGCKPDQNTYNSIVDWYCK 516
M V D V++ V+ YA FG A+ +Q M++ G KPD T ++ +
Sbjct: 432 MN----VRDAVSWTAMVSAYA---QFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSR 484
Query: 517 LHLREEAYNFVHNLSS 532
L E+ + ++S
Sbjct: 485 AGLVEKGQRYFKLMTS 500
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 155/354 (43%), Gaps = 66/354 (18%)
Query: 9 GLAPDLCTFNTLISC-CRAGSL-YEEALELFEEIK----------LAGL----------- 45
GL+ D+ N LI C R G L +A++LFE++ L GL
Sbjct: 147 GLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARR 206
Query: 46 ------RPDMVTYNALLDVYGKSRRPKEAMEVLKQMESR----------GFPPS------ 83
+ D++++N +LD Y + R +A E+ ++M R G+ +
Sbjct: 207 LFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMA 266
Query: 84 -------------IVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFV 130
+VT+T +I+ Y GLL+EA L +QMV +K D ++L+
Sbjct: 267 RVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACT 326
Query: 131 NAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIV 190
+ L MR+ ++ + N NAL+ MY G + VF +I D+V
Sbjct: 327 ESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIP----KKDLV 382
Query: 191 TWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRM 250
+WNT+L G +G E +F M+R G P++ TF ++ + + G D+ + M
Sbjct: 383 SWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSM 442
Query: 251 LEA-GVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
+ + P + Y ++ L R G +++ KV+ M +PN V + +LL A
Sbjct: 443 EKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMP---MEPNVVIWGALLGA 493
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/474 (21%), Positives = 217/474 (45%), Gaps = 31/474 (6%)
Query: 82 PSIVTYTSLISAYVRD----GLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDEL 137
PS V+ + ++D L + +L Q++ +++ D++ L+S ++ L
Sbjct: 10 PSWVSSRRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNL 69
Query: 138 AMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLL- 196
A+RVF +++ +PN+ N+LI+ + + VF E++ D T+ LL
Sbjct: 70 AVRVFNQVQ----EPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLK 125
Query: 197 AVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVT 256
A GQ+ L V + +++ G + N LI YSRCG A+ ++ E
Sbjct: 126 ACSGQSWL-PVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAM--KLFEKMSE 182
Query: 257 PDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNAL 316
D ++N++L L + G + ++ EM + + ++++++L YA +E K
Sbjct: 183 RDTVSWNSMLGGLVKAGELRDARRLFDEMP----QRDLISWNTMLDGYARCREMSK---- 234
Query: 317 AEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIP-HDITTLNAMLSLYG 375
A E++ + V T+V+ SK + E A + F K +P ++ T +++ Y
Sbjct: 235 AFELFEKMPERNTVSWSTMVMGYSK---AGDMEMARVMFDKMPLPAKNVVTWTIIIAGYA 291
Query: 376 RKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKG-IEPDL 434
K L+ + ++++ M SG S++ + + M + IL++ + +
Sbjct: 292 EKGLLKEADRLVDQMVASGLKFDAAAVISILAACTES-GLLSLGMRIHSILKRSNLGSNA 350
Query: 435 ISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQC 494
N ++ Y + G + +A + N++ P D+V++NT + + EAI +
Sbjct: 351 YVLNALLDMYAKCGNLKKAFDVFNDI----PKKDLVSWNTMLHGLGVHGHGKEAIELFSR 406
Query: 495 MIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSL-DLHVSEEEKGRLLE 547
M ++G +PD+ T+ +++ L +E ++ +++ + DL E G L++
Sbjct: 407 MRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVD 460
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 146/329 (44%), Gaps = 43/329 (13%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGK-- 61
+M+ GL D T+ L+ C S + I+ GL D+ NAL+D Y +
Sbjct: 107 EMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCG 166
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYT 121
++AM++ ++M R V++ S++ V+ G L +A L ++M ++ D+ +
Sbjct: 167 GLGVRDAMKLFEKMSER----DTVSWNSMLGGLVKAGELRDARRLFDEMPQR----DLIS 218
Query: 122 YTTLLSGFVNAKKDELAMRVFEEM---------------RTAG--------------CKP 152
+ T+L G+ ++ A +FE+M AG
Sbjct: 219 WNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAK 278
Query: 153 NICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVF 212
N+ T+ +I Y ++G+ E ++ ++ A D ++LA ++GL S +
Sbjct: 279 NVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIH 338
Query: 213 KEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARG 272
+KR+ N L+ Y++CG+ +A V+ + + DL ++N +L L
Sbjct: 339 SILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLGVH 394
Query: 273 GLWEQSEKVLSEMENGRCKPNEVTYSSLL 301
G +++ ++ S M +P++VT+ ++L
Sbjct: 395 GHGKEAIELFSRMRREGIRPDKVTFIAVL 423
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 107/525 (20%), Positives = 222/525 (42%), Gaps = 64/525 (12%)
Query: 10 LAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAM 69
+AP L + +S CR +L A+ +F +++ P++ N+L+ + ++ +P +A
Sbjct: 53 IAPKLIS---ALSLCRQTNL---AVRVFNQVQ----EPNVHLCNSLIRAHAQNSQPYQAF 102
Query: 70 EVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGF 129
V +M+ G TY L+ A L + N + + + D+Y L+ +
Sbjct: 103 FVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCY 162
Query: 130 VNAK----KDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQC 185
+D AM++FE+M + + ++N+++ G + ++F E+
Sbjct: 163 SRCGGLGVRD--AMKLFEKMS----ERDTVSWNSMLGGLVKAGELRDARRLFDEMP---- 212
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERET--FNTLISAYSRCGSFDQA 243
D+++WNT+L + + S+ +F++M PER T ++T++ YS+ G + A
Sbjct: 213 QRDLISWNTMLDGYARCREMSKAFELFEKM------PERNTVSWSTMVMGYSKAGDMEMA 266
Query: 244 RAVYKRM-LEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
R ++ +M L A ++ T+ ++A A GL +++++++ +M K + S+L
Sbjct: 267 RVMFDKMPLPA---KNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILA 323
Query: 303 AYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPH 362
A + + + ++A +L L+ + +K L +A F + K+
Sbjct: 324 ACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK---- 379
Query: 363 DITTLNAMLSLYGRKKLVAKTNKILKFMYESG-------FTLSLPGYNSLMYLHSRTRNF 415
D+ + N ML G + ++ M G F L N + F
Sbjct: 380 DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYF 439
Query: 416 RKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPV-PDVVTYNT 474
E + + P + Y ++ R G++ EA +++ M P+ P+VV +
Sbjct: 440 YSMEKVYDLV------PQVEHYGCLVDLLGRVGRLKEAIKVVQTM----PMEPNVVIWGA 489
Query: 475 FVATYAANSMFGEAIGVVQCMIK-QGCKPDQ-----NTYNSIVDW 513
+ ++ A V+ ++K C P N Y + DW
Sbjct: 490 LLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDW 534
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 86/194 (44%), Gaps = 8/194 (4%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M + GL D ++++ C L + + +K + L + NALLD+Y K
Sbjct: 306 MVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGN 365
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
K+A +V + + +V++ +++ G +EA+EL ++M + I+PD T+
Sbjct: 366 LKKAFDVFNDIPKK----DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIA 421
Query: 125 LLSGFVNAKKDELAMRVFEEM-RTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
+L +A + + F M + P + + L+ + G G E KV ++
Sbjct: 422 VLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKV---VQTM 478
Query: 184 QCSPDIVTWNTLLA 197
P++V W LL
Sbjct: 479 PMEPNVVIWGALLG 492
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 164/351 (46%), Gaps = 21/351 (5%)
Query: 31 EEALELFEEIKLAGLRP---DMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTY 87
E AL +F E++ R D+V YN + + G+ E + + M+ G + +TY
Sbjct: 193 ESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEITY 252
Query: 88 TSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRT 147
+ L+S +VR G E AL++ ++MV I ++S +K +LA+++F+ M
Sbjct: 253 SLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLK 312
Query: 148 AGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSE 207
G KPN+ N LI G G + KV+ +K+ PD TWN LL + +
Sbjct: 313 KGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYED 372
Query: 208 VSGVFKEMKRAGFVPERE-TFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVL 266
V +F ++ E +NT + + + G +++A + M +G+T S+YN V+
Sbjct: 373 VLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVI 432
Query: 267 AALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEI------ 320
+A + + + V M CKPN TY SL+ + G ++++ + +++
Sbjct: 433 SACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKKVEPDVSL 492
Query: 321 YSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAML 371
Y+ I H + L+ +F F A+ +++ ++ G+ D T ML
Sbjct: 493 YNAAI--HGMCLR------REFKF---AKELYVKMREMGLEPDGKTRAMML 532
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 153/311 (49%), Gaps = 12/311 (3%)
Query: 13 DLCTFNTLISCC-RAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV 71
D+ +NT IS C R ++YE ++ +K G +TY+ L+ ++ + R + A++V
Sbjct: 213 DVVLYNTAISLCGRINNVYETE-RIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDV 271
Query: 72 LKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVN 131
+M + ++ISA ++ + AL++ M++K +KP++ TL++
Sbjct: 272 YDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGK 331
Query: 132 AKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ-CSPDIV 190
A K L +V+ +++ G KP+ T+NAL+ + ++ ++F I++ C +
Sbjct: 332 AGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEY 391
Query: 191 TWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRM 250
+NT + + G + + EM+ +G ++N +ISA + A VY+ M
Sbjct: 392 LYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHM 451
Query: 251 LEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEF 310
+ P+ TY +++ + G LW++ E +L ++E P+ Y++ +H +EF
Sbjct: 452 AQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKKVE-----PDVSLYNAAIHGMCLRREF 506
Query: 311 EKMNALAEEIY 321
+ A+E+Y
Sbjct: 507 K----FAKELY 513
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 180/410 (43%), Gaps = 12/410 (2%)
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ + A+E+ M G P+ S +S +R+G +++A + M +K +TY+
Sbjct: 122 KVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKE-NVTGHTYS 180
Query: 124 TLLSGFVNAKKDELAMRVFEEM----RTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
+L K E A+R+F E+ + C ++ +N I + G E ++++
Sbjct: 181 LMLKAVAEVKGCESALRMFRELEREPKRRSC-FDVVLYNTAISLCGRINNVYETERIWRV 239
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+K +T++ L+++F + G V+ EM + +ISA ++
Sbjct: 240 MKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEK 299
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
+D A +++ ML+ G+ P+L N ++ +L + G KV S +++ KP+E T+++
Sbjct: 300 WDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNA 359
Query: 300 LLHAYANGKEFEKMNALAEEIYSGKITT-HAVLLKTLVLVNSKFDFLAEAEHAFLEFKKR 358
LL A +E + L + I S + + L T ++ K + +A E +
Sbjct: 360 LLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGS 419
Query: 359 GIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKS 418
G+ ++ N ++S + ++ +K+ +YE N+ YL S
Sbjct: 420 GLTVSTSSYNLVISACEK----SRKSKVALLVYEHMAQRDCKP-NTFTYLSLVRSCIWGS 474
Query: 419 EMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPD 468
E + K +EPD+ YN I+ C + AK + +M++ PD
Sbjct: 475 LWDEVEDILKKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPD 524
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 182/425 (42%), Gaps = 38/425 (8%)
Query: 100 LEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNIC--TF 157
+ ALEL + M ++P+ + + LS + + A VFE MR K N+ T+
Sbjct: 123 VRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRK---KENVTGHTY 179
Query: 158 NALIKMYGDRGMFAEMGKVFKEI------KACQCSPDIVTWNTLLAVFGQNGLDSEVSGV 211
+ ++K + ++F+E+ ++C D+V +NT +++ G+ E +
Sbjct: 180 SLMLKAVAEVKGCESALRMFRELEREPKRRSC---FDVVLYNTAISLCGRINNVYETERI 236
Query: 212 FKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALAR 271
++ MK G + T++ L+S + RCG + A VY M+ ++ A+++A +
Sbjct: 237 WRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTK 296
Query: 272 GGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYAN----GKEFEKMNALAEEIYSGKITT 327
W+ + K+ M KPN V ++L+++ G F+ + L + T
Sbjct: 297 EEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYT 356
Query: 328 HAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAML---SLYGRKKLVAKTN 384
LL L N D L + E ++ LN L ++ +KL
Sbjct: 357 WNALLTALYKANRYEDVLQLFDMIRSE--------NLCCLNEYLYNTAMVSCQKL-GYWE 407
Query: 385 KILKFMYE---SGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVI 441
K +K +YE SG T+S YN ++ ++R + + ++ + ++ +P+ +Y ++
Sbjct: 408 KAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLV 467
Query: 442 YAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCK 501
+ E + IL +++ PDV YN + F A + M + G +
Sbjct: 468 RSCIWGSLWDEVEDILKKVE-----PDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLE 522
Query: 502 PDQNT 506
PD T
Sbjct: 523 PDGKT 527
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 115/253 (45%), Gaps = 6/253 (2%)
Query: 20 LISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRG 79
+IS C ++ AL++F+ + G++P++V N L++ GK+ + +V ++S G
Sbjct: 290 MISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLG 349
Query: 80 FPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKP-DVYTYTTLLSGFVNAKKDELA 138
P T+ +L++A + E+ L+L + + +++ + Y Y T + E A
Sbjct: 350 HKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKA 409
Query: 139 MRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAV 198
+++ EM +G + ++N +I V++ + C P+ T+ +L+
Sbjct: 410 VKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRS 469
Query: 199 FGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPD 258
L EV + K+++ P+ +N I F A+ +Y +M E G+ PD
Sbjct: 470 CIWGSLWDEVEDILKKVE-----PDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPD 524
Query: 259 LSTYNAVLAALAR 271
T +L L +
Sbjct: 525 GKTRAMMLQNLKK 537
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 71/137 (51%), Gaps = 5/137 (3%)
Query: 17 FNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQME 76
+NT + C+ +E+A++L E++ +GL +YN ++ KSR+ K A+ V + M
Sbjct: 393 YNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMA 452
Query: 77 SRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDE 136
R P+ TY SL+ + + L +E + + K ++PDV Y + G ++ +
Sbjct: 453 QRDCKPNTFTYLSLVRSCIWGSLWDEV-----EDILKKVEPDVSLYNAAIHGMCLRREFK 507
Query: 137 LAMRVFEEMRTAGCKPN 153
A ++ +MR G +P+
Sbjct: 508 FAKELYVKMREMGLEPD 524
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/463 (22%), Positives = 208/463 (44%), Gaps = 23/463 (4%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M+ + + PD T + +ISCC LY + E+ ++ +ALL +Y K
Sbjct: 364 MRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGC 423
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMV--EKHIKPDVYTY 122
+A V K ME + +V + SLIS ++G +EAL++ M + +KPD
Sbjct: 424 DPDAYLVFKSMEEK----DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIM 479
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
T++ + + ++V M G N+ ++LI +Y G+ KVF +
Sbjct: 480 TSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMS- 538
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
+ ++V WN++++ + +N L +F M G P+ + +++ A S S +
Sbjct: 539 ---TENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLK 595
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
++++ L G+ D NA++ + G + +E + +M++ + +T++ +++
Sbjct: 596 GKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQH----KSLITWNLMIY 651
Query: 303 AYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKR--GI 360
Y + + +L +E+ + V +L+ + F+ E ++ F EF K+ GI
Sbjct: 652 GYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIF-EFMKQDYGI 710
Query: 361 PHDITTLNAMLSLYGRKKLVAKTNKILKFM-YESGFTLSLPGYNSLMYLHSRTRNFRKSE 419
++ M+ L GR L+ + +K M E+ ++ L ++ H+ +E
Sbjct: 711 EPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAE 770
Query: 420 MILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKD 462
+LR E+G +Y +I Y G EA ++L MK+
Sbjct: 771 KLLRMEPERG-----STYVQLINLYMEAGLKNEAAKLLGLMKE 808
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 125/600 (20%), Positives = 236/600 (39%), Gaps = 106/600 (17%)
Query: 9 GLAPDLCTFNTLISC-CRAGSLY-EEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPK 66
G+ PD + + ++S C+ G+ EE ++ + L D AL+D+Y K
Sbjct: 163 GVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSI 222
Query: 67 EAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLL 126
+A V ++E + ++V + +I + G+ E +L+L +K ++T L
Sbjct: 223 DAWRVFVEIEDK---SNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGAL 279
Query: 127 SGFVNAKKDELAMRVFEEMRTAGCK--PNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
++ ++ ++ G P +CT +L+ MY GM E VF +C
Sbjct: 280 GACSQSENSGFGRQIHCDVVKMGLHNDPYVCT--SLLSMYSKCGMVGEAETVF----SCV 333
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISA----------- 233
+ WN ++A + +N +F M++ +P+ T + +IS
Sbjct: 334 VDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGK 393
Query: 234 ------------------------YSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAAL 269
YS+CG A V+K M E D+ + ++++ L
Sbjct: 394 SVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEE----KDMVAWGSLISGL 449
Query: 270 ARGGLWEQSEKVLSEM--ENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITT 327
+ G ++++ KV +M ++ KP+ +S+ +A A E + G +
Sbjct: 450 CKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAG----------LEALRFG-LQV 498
Query: 328 HAVLLKTLVLVN-----SKFDFLAEA---EHAFLEFKKRGIPHDITTLNAMLSLYGRKKL 379
H ++KT +++N S D ++ E A F ++ N+M+S Y R L
Sbjct: 499 HGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMS-TENMVAWNSMISCYSRNNL 557
Query: 380 VAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPD------ 433
+ + M G S++ S T + K + + L GI D
Sbjct: 558 PELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNA 617
Query: 434 -------------------------LISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPD 468
LI++N++IY Y +G A + +EMK PD
Sbjct: 618 LIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPD 677
Query: 469 VVTYNTFVATYAANSMFGEAIGVVQCMIKQ-GCKPDQNTYNSIVDWYCKLHLREEAYNFV 527
VT+ + ++ + E + + M + G +P+ Y ++VD + L EEAY+F+
Sbjct: 678 DVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFI 737
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 135/285 (47%), Gaps = 11/285 (3%)
Query: 4 DMKSQ--GLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGK 61
DMK L PD ++ + C L++ + GL ++ ++L+D+Y K
Sbjct: 464 DMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSK 523
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYT 121
P+ A++V M + ++V + S+IS Y R+ L E +++L N M+ + I PD +
Sbjct: 524 CGLPEMALKVFTSMSTE----NMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVS 579
Query: 122 YTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK 181
T++L + + G + NALI MY G +FK+++
Sbjct: 580 ITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQ 639
Query: 182 ACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFD 241
++TWN ++ +G +G +F EMK+AG P+ TF +LISA + G +
Sbjct: 640 ----HKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVE 695
Query: 242 QARAVYKRM-LEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM 285
+ + +++ M + G+ P++ Y ++ L R GL E++ + M
Sbjct: 696 EGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAM 740
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 96/490 (19%), Positives = 199/490 (40%), Gaps = 94/490 (19%)
Query: 88 TSLISAYVRDGLLEEALELKNQMVEKH---IKPDVYTYTTLLSGFVNAKKDELAMRVFEE 144
TSL++ YV+ G L+ A+++ + + DV + +++ G+ ++ + + F
Sbjct: 99 TSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRR 158
Query: 145 MRTAGCKPNICTFN-------------------------------------ALIKMYGDR 167
M G +P+ + + ALI MY
Sbjct: 159 MLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKF 218
Query: 168 GMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETF 227
G+ + +VF EI+ ++V WN ++ FG +G+ ++ K +F
Sbjct: 219 GLSIDAWRVFVEIED---KSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSF 275
Query: 228 NTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMEN 287
+ A S+ + R ++ +++ G+ D ++L+ ++ G+ ++E V S + +
Sbjct: 276 TGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVD 335
Query: 288 GRCKPNEVTYSSLLHAYA-NGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLA 346
R + +++++ AYA N + ++ G + +VL + L N
Sbjct: 336 KRLE----IWNAMVAAYAENDYGYSALDLF------GFMRQKSVLPDSFTLSN------- 378
Query: 347 EAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLM 406
+ + ++L LY K V ++ K +S T+ ++L+
Sbjct: 379 -----------------VISCCSVLGLYNYGKSVHA--ELFKRPIQSTSTIE----SALL 415
Query: 407 YLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDP--- 463
L+S+ + ++ + + EK D++++ +I C+NGK EA ++ +MKD
Sbjct: 416 TLYSKCGCDPDAYLVFKSMEEK----DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDS 471
Query: 464 -APVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREE 522
P D++T T FG + V MIK G + +S++D Y K L E
Sbjct: 472 LKPDSDIMTSVTNACAGLEALRFG--LQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEM 529
Query: 523 AYNFVHNLSS 532
A ++S+
Sbjct: 530 ALKVFTSMST 539
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 151/293 (51%), Gaps = 17/293 (5%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV 71
PD +F ++ C A +EE ++ +GL D+ N L++VYG+S + A +V
Sbjct: 138 PDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKV 197
Query: 72 LKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVN 131
L +M R V++ SL+SAY+ GL++EA L ++M E++++ ++ ++SG+
Sbjct: 198 LDRMPVR----DAVSWNSLLSAYLEKGLVDEARALFDEMEERNVE----SWNFMISGYAA 249
Query: 132 AKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVF-KEIKACQCSPDIV 190
A + A VF+ M ++ ++NA++ Y G + E+ +VF K + PD
Sbjct: 250 AGLVKEAKEVFDSMPVR----DVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGF 305
Query: 191 TWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRM 250
T ++L+ G S+ V + + G E L+ YS+CG D+A V++
Sbjct: 306 TLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFR-- 363
Query: 251 LEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
A D+ST+N++++ L+ GL + + ++ SEM KPN +T+ +L A
Sbjct: 364 --ATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSA 414
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 134/275 (48%), Gaps = 14/275 (5%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVL 72
D ++N+L+S L +EA LF+E++ ++ ++N ++ Y + KEA EV
Sbjct: 205 DAVSWNSLLSAYLEKGLVDEARALFDEME----ERNVESWNFMISGYAAAGLVKEAKEVF 260
Query: 73 KQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHI-KPDVYTYTTLLSGFVN 131
M R +V++ ++++AY G E LE+ N+M++ KPD +T ++LS +
Sbjct: 261 DSMPVR----DVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACAS 316
Query: 132 AKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVT 191
V + G + AL+ MY G + +VF+ D+ T
Sbjct: 317 LGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFR----ATSKRDVST 372
Query: 192 WNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRML 251
WN++++ +GL + +F EM GF P TF ++SA + G DQAR +++ M
Sbjct: 373 WNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMS 432
Query: 252 EA-GVTPDLSTYNAVLAALARGGLWEQSEKVLSEM 285
V P + Y ++ L R G E++E++++E+
Sbjct: 433 SVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEI 467
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/424 (22%), Positives = 175/424 (41%), Gaps = 69/424 (16%)
Query: 47 PDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALEL 106
P+ T+N+++ Y S P+ A+ V ++M P ++T ++ A EE ++
Sbjct: 103 PNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQI 162
Query: 107 KNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGD 166
++ + DV+ TL++ + + E+A +V + M + ++N+L+ Y +
Sbjct: 163 HGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR----DAVSWNSLLSAYLE 218
Query: 167 RGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERE- 225
+G+ E +F E++ ++ +WN +++ + GL E VF M P R+
Sbjct: 219 KGLVDEARALFDEME----ERNVESWNFMISGYAAAGLVKEAKEVFDSM------PVRDV 268
Query: 226 -TFNTLISAYSRCGSFDQARAVYKRMLEAGV-TPDLSTYNAVLAALARGGLWEQSEKVLS 283
++N +++AY+ G +++ V+ +ML+ PD T +VL+A A G Q E V
Sbjct: 269 VSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWV-- 326
Query: 284 EMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFD 343
H Y I I L LV + SK
Sbjct: 327 ------------------HVY---------------IDKHGIEIEGFLATALVDMYSKCG 353
Query: 344 FLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLS----- 398
+ +A F KR D++T N+++S L +I M GF +
Sbjct: 354 KIDKALEVFRATSKR----DVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFI 409
Query: 399 --LPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRI 456
L N + L + F + R +EP + Y ++ R GK+ EA+ +
Sbjct: 410 GVLSACNHVGMLDQARKLFEMMSSVYR------VEPTIEHYGCMVDLLGRMGKIEEAEEL 463
Query: 457 LNEM 460
+NE+
Sbjct: 464 VNEI 467
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 156/354 (44%), Gaps = 27/354 (7%)
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
SP+ T N+++ + + VF+EM P++ +F ++ A + F++ R
Sbjct: 102 SPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQ 161
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA 305
++ +++G+ D+ N ++ R G +E + KVL M + V+++SLL AY
Sbjct: 162 IHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMP----VRDAVSWNSLLSAYL 217
Query: 306 NGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDIT 365
++ AL +E+ + + ++ + EA+ F R D+
Sbjct: 218 EKGLVDEARALFDEMEERNVESWNFMISGYAAAG----LVKEAKEVFDSMPVR----DVV 269
Query: 366 TLNAMLSLYGR----KKLVAKTNKILKFMYE--SGFTLSLPGYNSLMYLHSRTRNFRKSE 419
+ NAM++ Y +++ NK+L E GFTL S++ + + + E
Sbjct: 270 SWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLV-----SVLSACASLGSLSQGE 324
Query: 420 MILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATY 479
+ I + GIE + ++ Y + GK+ +A + DV T+N+ ++
Sbjct: 325 WVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSK----RDVSTWNSIISDL 380
Query: 480 AANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSL 533
+ + + +A+ + M+ +G KP+ T+ ++ + + ++A +SS+
Sbjct: 381 SVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSV 434
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 195/458 (42%), Gaps = 43/458 (9%)
Query: 61 KSRRPKEAMEVLKQMESRGFPP-SIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
KS R A +V G P V + +++++Y R GL +EA+ L Q+ KPD
Sbjct: 16 KSGRIASARQVFD-----GMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
Y++T +LS + + ++ + +G ++ N+LI MYG KVF++
Sbjct: 71 YSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRD 130
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEM-KRAGFVPERETFNTLISAYSRCG 238
+ C S + VTW +LL + VF EM KR F +N +IS ++ CG
Sbjct: 131 M--CCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFA-----WNIMISGHAHCG 183
Query: 239 SFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM------ENGRCKP 292
+ +++K MLE+ PD T+++++ A + + S V M +NG
Sbjct: 184 KLESCLSLFKEMLESEFKPDCYTFSSLMNACSA----DSSNVVYGRMVHAVMLKNGWSSA 239
Query: 293 NEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDF---LAEAE 349
E S L G + M L ++ + T V NS D + E E
Sbjct: 240 VEAKNSVLSFYTKLGSRDDAMREL-----------ESIEVLTQVSWNSIIDACMKIGETE 288
Query: 350 HAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLH 409
A LE +I T M++ YGR + + M +SG Y ++++
Sbjct: 289 KA-LEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHAC 347
Query: 410 SRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDV 469
S +MI ++ G + N ++ Y + G + EA R ++ + D+
Sbjct: 348 SGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIAN----KDL 403
Query: 470 VTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTY 507
V++NT + + + + +A+ + MI G KPD T+
Sbjct: 404 VSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTF 441
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 105/488 (21%), Positives = 208/488 (42%), Gaps = 56/488 (11%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVL 72
D +NT+++ L++EA+ LF +++ + +PD ++ A+L K ++
Sbjct: 34 DTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQ 93
Query: 73 KQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNA 132
+ GF S+ SLI Y + A ++ M + T+ +LL ++NA
Sbjct: 94 SLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCD--SRNEVTWCSLLFAYMNA 151
Query: 133 KKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTW 192
++ E A+ VF EM K +N +I + G +FKE+ + PD T+
Sbjct: 152 EQFEAALDVFVEMP----KRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTF 207
Query: 193 NTLLAVFGQNGLDSEVSG--VFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRM 250
++L+ + + V G V M + G+ E N+++S Y++ GS D A R
Sbjct: 208 SSLMNACSADS-SNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAM----RE 262
Query: 251 LEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEF 310
LE+ ++N+++ A + G ++EK L E+ + + N VT+++++ Y +
Sbjct: 263 LESIEVLTQVSWNSIIDACMKIG---ETEKAL-EVFHLAPEKNIVTWTTMITGYGRNGDG 318
Query: 311 EKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAM 370
E +A F+E K G+ D A+
Sbjct: 319 E-----------------------------------QALRFFVEMMKSGVDSDHFAYGAV 343
Query: 371 LSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGI 430
L L+ I + GF N+L+ L+++ + ++++ +I K
Sbjct: 344 LHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANK-- 401
Query: 431 EPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIG 490
DL+S+N +++A+ +G +A ++ + M PD VT+ + T + + + E
Sbjct: 402 --DLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCM 459
Query: 491 VVQCMIKQ 498
+ + M+K
Sbjct: 460 IFESMVKD 467
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 147/339 (43%), Gaps = 61/339 (17%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIKLA-GLRPDMVTYNALLDVYGKSRRPKEAME 70
PD TF++L++ C A S + + L G + N++L Y K +AM
Sbjct: 202 PDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMR 261
Query: 71 VLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFV 130
L+ +E + V++ S+I A ++ G E+ALE+ + EK+I T+TT+++G+
Sbjct: 262 ELESIE----VLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNI----VTWTTMITGYG 313
Query: 131 NAKKDELAMRVFEEMRTAGCKPN----------------------------ICTF----- 157
E A+R F EM +G + C F
Sbjct: 314 RNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAY 373
Query: 158 --NALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEM 215
NAL+ +Y G E + F +I + D+V+WNT+L FG +GL + ++ M
Sbjct: 374 VGNALVNLYAKCGDIKEADRAFGDIA----NKDLVSWNTMLFAFGVHGLADQALKLYDNM 429
Query: 216 KRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTP-DLSTYNAVLAALARGGL 274
+G P+ TF L++ S G ++ +++ M++ P ++ ++ RGG
Sbjct: 430 IASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGH 489
Query: 275 WEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKM 313
+++ + + TYSSL+ +N +E +
Sbjct: 490 LAEAKDLAT------------TYSSLVTDSSNNSSWETL 516
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 170/415 (40%), Gaps = 50/415 (12%)
Query: 158 NALIKMYGDRGMFAEMGKVFKEIKACQCSP--DIVTWNTLLAVFGQNGLDSEVSGVFKEM 215
+ L+++ A+ G++ + P D V WNT+L + + GL E +F ++
Sbjct: 2 SVLVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQL 61
Query: 216 KRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLW 275
+ + P+ +F ++S + G+ R + ++ +G L N+++ +
Sbjct: 62 RFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDT 121
Query: 276 EQSEKVLSEMENGRCKP-NEVTYSSLLHAYANGKEFE----------KMNALAEEI---- 320
+ KV +M C NEVT+ SLL AY N ++FE K A A I
Sbjct: 122 LSANKVFRDM---CCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISG 178
Query: 321 --YSGKITTHAVLLKTLVLVNSK-----FDFLAEA-------------EHAFLEFKKRGI 360
+ GK+ + L K ++ K F L A HA + K G
Sbjct: 179 HAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVM--LKNGW 236
Query: 361 PHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEM 420
+ N++LS Y KL ++ + + + ES L+ +NS++ ++E
Sbjct: 237 SSAVEAKNSVLSFY--TKLGSRDDAMREL--ESIEVLTQVSWNSII---DACMKIGETEK 289
Query: 421 ILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYA 480
L E+ E +++++ +I Y RNG +A R EM D Y + +
Sbjct: 290 AL-EVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACS 348
Query: 481 ANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDL 535
++ G + C+I G + N++V+ Y K +EA ++++ DL
Sbjct: 349 GLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDL 403
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 120/295 (40%), Gaps = 52/295 (17%)
Query: 10 LAP--DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTY--------------- 52
LAP ++ T+ T+I+ E+AL F E+ +G+ D Y
Sbjct: 296 LAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGH 355
Query: 53 --------------------NALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLIS 92
NAL+++Y K KEA + ++ +V++ +++
Sbjct: 356 GKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANK----DLVSWNTMLF 411
Query: 93 AYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKP 152
A+ GL ++AL+L + M+ IKPD T+ LL+ ++ E +FE M P
Sbjct: 412 AFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIP 471
Query: 153 -NICTFNALIKMYGDRGMFAEMGKVFKEIKACQC-SPDIVTWNTLLAVFGQNG---LDSE 207
+ +I M+G G AE + + S + +W TLL + L E
Sbjct: 472 LEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGRE 531
Query: 208 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGV--TPDLS 260
VS V K + + E +F L + Y G + + V + M+E G+ TP S
Sbjct: 532 VSKVLKIAEPS----EEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCS 582
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 136/289 (47%), Gaps = 38/289 (13%)
Query: 70 EVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGF 129
+++ ES S + YT+L+ + RDG L A +L + EK+I + + LL+
Sbjct: 56 KIVNHSESGSKIISKIDYTNLVEKFTRDGNLSGAYDLLQSLQEKNICLPISVFKNLLAAA 115
Query: 130 VNAKKDELAMRVFEEMR--------TAGCKPNI---------CTF--------------- 157
+L+ RVF E+ ++ C N+ CT+
Sbjct: 116 GELNDMKLSCRVFREVLILPGKEPLSSDCYLNLARAFINTDDCTYLTSLLKEISESSLPY 175
Query: 158 -----NALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVF 212
N +I + + ++ + KE+K +C PD++T+N++L + G+ GL +E+ GV
Sbjct: 176 RLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVL 235
Query: 213 KEMKRAGFVPERE-TFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALAR 271
MK V T+NT+++ + FD +Y M++ G+ PDL +Y AV+ +L R
Sbjct: 236 STMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGR 295
Query: 272 GGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEI 320
G ++S ++ EM+ + +P+ Y +L+ +F+ L++E+
Sbjct: 296 SGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDEL 344
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 122/266 (45%), Gaps = 3/266 (1%)
Query: 227 FNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSE-- 284
+ L+ ++R G+ A + + + E + +S + +LAA + S +V E
Sbjct: 73 YTNLVEKFTRDGNLSGAYDLLQSLQEKNICLPISVFKNLLAAAGELNDMKLSCRVFREVL 132
Query: 285 MENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDF 344
+ G+ + Y +L A+ N + + +L +EI + +++ ++ ++
Sbjct: 133 ILPGKEPLSSDCYLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQ 192
Query: 345 LAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYES-GFTLSLPGYN 403
+ + E K+ D+ T N++L + GR LV + +L M E ++++ YN
Sbjct: 193 IDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYN 252
Query: 404 SLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDP 463
+++ + F +I E+++ GIEPDL+SY VI + R+G + E+ R+ +EMK
Sbjct: 253 TVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQR 312
Query: 464 APVPDVVTYNTFVATYAANSMFGEAI 489
P V Y + + F A+
Sbjct: 313 QIRPSVYVYRALIDCLKKSGDFQSAL 338
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 93/182 (51%), Gaps = 1/182 (0%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L ++ L L N +I ++ L + +E+K +PD++TYN++LD+ G
Sbjct: 164 LLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILG 223
Query: 61 KSRRPKEAMEVLKQM-ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
++ E + VL M E +I+TY ++++ + + L + N+MV+ I+PD+
Sbjct: 224 RAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDL 283
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
+YT ++ + + ++R+F+EM+ +P++ + ALI G F ++ E
Sbjct: 284 LSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDE 343
Query: 180 IK 181
+K
Sbjct: 344 LK 345
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 1/128 (0%)
Query: 386 ILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYC 445
+LK + ES L N +++ + TR K MIL+E+ E +PD+I+YN V+
Sbjct: 164 LLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILG 223
Query: 446 RNGKMTEAKRILNEMKDPAPVP-DVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQ 504
R G + E +L+ MK+ V +++TYNT + F + + M++ G +PD
Sbjct: 224 RAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDL 283
Query: 505 NTYNSIVD 512
+Y +++D
Sbjct: 284 LSYTAVID 291
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 118/565 (20%), Positives = 235/565 (41%), Gaps = 68/565 (12%)
Query: 9 GLAPDLCTFNTLISCC-RAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKE 67
G+ P +L++ C R+GS++ E +++ + +GL D+ A+L +YG
Sbjct: 36 GIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSC 95
Query: 68 AMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLS 127
+ +V ++M R ++V++TSL+ Y G EE +++ M + + + + + ++S
Sbjct: 96 SRKVFEEMPDR----NVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVIS 151
Query: 128 GFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSP 187
K + L ++ ++ +G + + N+LI M G G +F ++
Sbjct: 152 SCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS----ER 207
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKR------------------------------ 217
D ++WN++ A + QNG E +F M+R
Sbjct: 208 DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIH 267
Query: 218 -----AGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARG 272
GF NTL+ Y+ G +A V+K+M T DL ++N+++A+
Sbjct: 268 GLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQM----PTKDLISWNSLMASFVND 323
Query: 273 GLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLL 332
G + +L M + N VT++S L A FEK L + + + ++
Sbjct: 324 GRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG 383
Query: 333 KTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYE 392
LV + K ++E+ L+ +R D+ NA++ Y + K + M
Sbjct: 384 NALVSMYGKIGEMSESRRVLLQMPRR----DVVAWNALIGGYAEDEDPDKALAAFQTMRV 439
Query: 393 SGFTLSLPGYNSLMYLHSRTRNFRKSEMILRE------ILEKGIEPDLISYNIVIYAYCR 446
G + N + + + +++ R I+ G E D N +I Y +
Sbjct: 440 EGVS-----SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAK 494
Query: 447 NGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNT 506
G ++ ++ + N + + +++T+N +A A + E + +V M G DQ +
Sbjct: 495 CGDLSSSQDLFNGLDN----RNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFS 550
Query: 507 YNSIVDWYCKLHLREEAYNFVHNLS 531
++ + KL + EE +H L+
Sbjct: 551 FSEGLSAAAKLAVLEEGQQ-LHGLA 574
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 109/541 (20%), Positives = 237/541 (43%), Gaps = 52/541 (9%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEAL--ELFEEIKLAGLRPDMVTYNALLDVYGKS 62
M+ +G+ + + + +IS C G L +E+L ++ ++ +GL + N+L+ + G
Sbjct: 134 MRGEGVGCNENSMSLVISSC--GLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSM 191
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
A + QM R +++ S+ +AY ++G +EE+ + + M H + + T
Sbjct: 192 GNVDYANYIFDQMSER----DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTV 247
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
+TLLS + + + + G +C N L++MY G E VFK++
Sbjct: 248 STLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP- 306
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
+ D+++WN+L+A F +G + G+ M +G TF + ++A F++
Sbjct: 307 ---TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEK 363
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
R ++ ++ +G+ + NA+++ + G +S +VL +M + + V +++L+
Sbjct: 364 GRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP----RRDVVAWNALIG 419
Query: 303 AYANGKEFEKMNAL-----AEEIYSGKITTHAVLLKTLV--------------LVNSKFD 343
YA ++ +K A E + S IT +VL L+ +V++ F+
Sbjct: 420 GYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFE 479
Query: 344 FLAEAEHAFLEFKKR------------GIPH-DITTLNAMLSLYGRKKLVAKTNKILKFM 390
+++ + + G+ + +I T NAML+ + K++ M
Sbjct: 480 SDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 539
Query: 391 YESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKM 450
G +L ++ + ++ + + + ++ G E D +N Y + G++
Sbjct: 540 RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEI 599
Query: 451 TEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSI 510
E ++L P+ + ++N ++ + F E M++ G KP T+ S+
Sbjct: 600 GEVVKML----PPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSL 655
Query: 511 V 511
+
Sbjct: 656 L 656
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 176/401 (43%), Gaps = 18/401 (4%)
Query: 53 NALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVE 112
N LL +Y + R EA V KQM ++ ++++ SL++++V DG +AL L M+
Sbjct: 283 NTLLRMYAGAGRSVEANLVFKQMPTK----DLISWNSLMASFVNDGRSLDALGLLCSMIS 338
Query: 113 KHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAE 172
+ T+T+ L+ E + + +G N NAL+ MYG G +E
Sbjct: 339 SGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSE 398
Query: 173 MGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLIS 232
+V ++ D+V WN L+ + ++ + F+ M+ G T +++S
Sbjct: 399 SRRVLLQMP----RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLS 454
Query: 233 AYSRCGSF-DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCK 291
A G ++ + ++ ++ AG D N+++ A+ G S+ + + ++N
Sbjct: 455 ACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDN---- 510
Query: 292 PNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHA 351
N +T++++L A A+ E++ L ++ S ++ + +K L E +
Sbjct: 511 RNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL 570
Query: 352 FLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSR 411
K G HD NA +Y + + + K+L SLP +N L+ R
Sbjct: 571 HGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLP----PSVNRSLPSWNILISALGR 626
Query: 412 TRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTE 452
F + E+LE GI+P +++ + + C +G + +
Sbjct: 627 HGYFEEVCATFHEMLEMGIKPGHVTF-VSLLTACSHGGLVD 666
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 144/348 (41%), Gaps = 48/348 (13%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L M S G + + TF + ++ C +E+ L + ++GL + + NAL+ +YG
Sbjct: 332 LLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYG 391
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K E+ VL QM R +V + +LI Y D ++AL M + + +
Sbjct: 392 KIGEMSESRRVLLQMPRR----DVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYI 447
Query: 121 TYTTLLSG-FVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
T ++LS + E + + +AG + + N+LI MY G + +F
Sbjct: 448 TVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNG 507
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMK----------------------- 216
+ + +I+TWN +LA +G EV + +M+
Sbjct: 508 LD----NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 563
Query: 217 ------------RAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNA 264
+ GF + FN YS+CG + +ML V L ++N
Sbjct: 564 LEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEV----VKMLPPSVNRSLPSWNI 619
Query: 265 VLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEK 312
+++AL R G +E+ EM KP VT+ SLL A ++G +K
Sbjct: 620 LISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDK 667
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 97/466 (20%), Positives = 197/466 (42%), Gaps = 58/466 (12%)
Query: 85 VTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLS--GFVNAKKDELAMRVF 142
V++ +++S VR GL E +E +M + IKP + +L++ G + E ++V
Sbjct: 7 VSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE-GVQVH 65
Query: 143 EEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPD--IVTWNTLLAVFG 200
+ +G ++ A++ +YG G+ + KVF+E+ PD +V+W +L+ +
Sbjct: 66 GFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM------PDRNVVSWTSLMVGYS 119
Query: 201 QNGLDSEVSGVFKEMK-----------------------------------RAGFVPERE 225
G EV ++K M+ ++G +
Sbjct: 120 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLA 179
Query: 226 TFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM 285
N+LIS G+ D A ++ +M E D ++N++ AA A+ G E+S ++ S M
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMSER----DTISWNSIAAAYAQNGHIEESFRIFSLM 235
Query: 286 ENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFL 345
+ N T S+LL + + + + + + TL+ + +
Sbjct: 236 RRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRS 295
Query: 346 AEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSL 405
EA F + + D+ + N++++ + +L M SG +++ + S
Sbjct: 296 VEANLVFKQMPTK----DLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSA 351
Query: 406 MYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAP 465
+ F K ++ ++ G+ + I N ++ Y + G+M+E++R+L +M P
Sbjct: 352 LAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM----P 407
Query: 466 VPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
DVV +N + YA + +A+ Q M +G + T S++
Sbjct: 408 RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVL 453
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 118/565 (20%), Positives = 235/565 (41%), Gaps = 68/565 (12%)
Query: 9 GLAPDLCTFNTLISCC-RAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKE 67
G+ P +L++ C R+GS++ E +++ + +GL D+ A+L +YG
Sbjct: 53 GIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSC 112
Query: 68 AMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLS 127
+ +V ++M R ++V++TSL+ Y G EE +++ M + + + + + ++S
Sbjct: 113 SRKVFEEMPDR----NVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVIS 168
Query: 128 GFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSP 187
K + L ++ ++ +G + + N+LI M G G +F ++
Sbjct: 169 SCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS----ER 224
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKR------------------------------ 217
D ++WN++ A + QNG E +F M+R
Sbjct: 225 DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIH 284
Query: 218 -----AGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARG 272
GF NTL+ Y+ G +A V+K+M T DL ++N+++A+
Sbjct: 285 GLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQM----PTKDLISWNSLMASFVND 340
Query: 273 GLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLL 332
G + +L M + N VT++S L A FEK L + + + ++
Sbjct: 341 GRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG 400
Query: 333 KTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYE 392
LV + K ++E+ L+ +R D+ NA++ Y + K + M
Sbjct: 401 NALVSMYGKIGEMSESRRVLLQMPRR----DVVAWNALIGGYAEDEDPDKALAAFQTMRV 456
Query: 393 SGFTLSLPGYNSLMYLHSRTRNFRKSEMILRE------ILEKGIEPDLISYNIVIYAYCR 446
G + N + + + +++ R I+ G E D N +I Y +
Sbjct: 457 EGVS-----SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAK 511
Query: 447 NGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNT 506
G ++ ++ + N + + +++T+N +A A + E + +V M G DQ +
Sbjct: 512 CGDLSSSQDLFNGLDN----RNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFS 567
Query: 507 YNSIVDWYCKLHLREEAYNFVHNLS 531
++ + KL + EE +H L+
Sbjct: 568 FSEGLSAAAKLAVLEEGQQ-LHGLA 591
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 109/541 (20%), Positives = 237/541 (43%), Gaps = 52/541 (9%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEAL--ELFEEIKLAGLRPDMVTYNALLDVYGKS 62
M+ +G+ + + + +IS C G L +E+L ++ ++ +GL + N+L+ + G
Sbjct: 151 MRGEGVGCNENSMSLVISSC--GLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSM 208
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
A + QM R +++ S+ +AY ++G +EE+ + + M H + + T
Sbjct: 209 GNVDYANYIFDQMSER----DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTV 264
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
+TLLS + + + + G +C N L++MY G E VFK++
Sbjct: 265 STLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP- 323
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
+ D+++WN+L+A F +G + G+ M +G TF + ++A F++
Sbjct: 324 ---TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEK 380
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
R ++ ++ +G+ + NA+++ + G +S +VL +M + + V +++L+
Sbjct: 381 GRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP----RRDVVAWNALIG 436
Query: 303 AYANGKEFEKMNAL-----AEEIYSGKITTHAVLLKTLV--------------LVNSKFD 343
YA ++ +K A E + S IT +VL L+ +V++ F+
Sbjct: 437 GYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFE 496
Query: 344 FLAEAEHAFLEFKKR------------GIPH-DITTLNAMLSLYGRKKLVAKTNKILKFM 390
+++ + + G+ + +I T NAML+ + K++ M
Sbjct: 497 SDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 556
Query: 391 YESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKM 450
G +L ++ + ++ + + + ++ G E D +N Y + G++
Sbjct: 557 RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEI 616
Query: 451 TEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSI 510
E ++L P+ + ++N ++ + F E M++ G KP T+ S+
Sbjct: 617 GEVVKML----PPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSL 672
Query: 511 V 511
+
Sbjct: 673 L 673
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 176/401 (43%), Gaps = 18/401 (4%)
Query: 53 NALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVE 112
N LL +Y + R EA V KQM ++ ++++ SL++++V DG +AL L M+
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTK----DLISWNSLMASFVNDGRSLDALGLLCSMIS 355
Query: 113 KHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAE 172
+ T+T+ L+ E + + +G N NAL+ MYG G +E
Sbjct: 356 SGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSE 415
Query: 173 MGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLIS 232
+V ++ D+V WN L+ + ++ + F+ M+ G T +++S
Sbjct: 416 SRRVLLQMP----RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLS 471
Query: 233 AYSRCGSF-DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCK 291
A G ++ + ++ ++ AG D N+++ A+ G S+ + + ++N
Sbjct: 472 ACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDN---- 527
Query: 292 PNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHA 351
N +T++++L A A+ E++ L ++ S ++ + +K L E +
Sbjct: 528 RNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL 587
Query: 352 FLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSR 411
K G HD NA +Y + + + K+L SLP +N L+ R
Sbjct: 588 HGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLP----PSVNRSLPSWNILISALGR 643
Query: 412 TRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTE 452
F + E+LE GI+P +++ + + C +G + +
Sbjct: 644 HGYFEEVCATFHEMLEMGIKPGHVTF-VSLLTACSHGGLVD 683
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 144/348 (41%), Gaps = 48/348 (13%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L M S G + + TF + ++ C +E+ L + ++GL + + NAL+ +YG
Sbjct: 349 LLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYG 408
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K E+ VL QM R +V + +LI Y D ++AL M + + +
Sbjct: 409 KIGEMSESRRVLLQMPRR----DVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYI 464
Query: 121 TYTTLLSG-FVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
T ++LS + E + + +AG + + N+LI MY G + +F
Sbjct: 465 TVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNG 524
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMK----------------------- 216
+ + +I+TWN +LA +G EV + +M+
Sbjct: 525 LD----NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 580
Query: 217 ------------RAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNA 264
+ GF + FN YS+CG + +ML V L ++N
Sbjct: 581 LEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEV----VKMLPPSVNRSLPSWNI 636
Query: 265 VLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEK 312
+++AL R G +E+ EM KP VT+ SLL A ++G +K
Sbjct: 637 LISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDK 684
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/491 (21%), Positives = 219/491 (44%), Gaps = 58/491 (11%)
Query: 58 VYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKP 117
+Y K R K A + M R + V++ +++S VR GL E +E +M + IKP
Sbjct: 1 MYTKFGRVKPARHLFDIMPVR----NEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKP 56
Query: 118 DVYTYTTLLS--GFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGK 175
+ +L++ G + E ++V + +G ++ A++ +YG G+ + K
Sbjct: 57 SSFVIASLVTACGRSGSMFRE-GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRK 115
Query: 176 VFKEIKACQCSPD--IVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISA 233
VF+E+ PD +V+W +L+ + G EV ++K M+ G + + +IS+
Sbjct: 116 VFEEM------PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISS 169
Query: 234 YSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPN 293
R + +++++G+ L+ N++++ L G + + + +M + +
Sbjct: 170 CGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS----ERD 225
Query: 294 EVTYSSLLHAYA-NG------KEFEKMNALAEEIYSGKITT-----------------HA 329
++++S+ AYA NG + F M +E+ S ++T H
Sbjct: 226 TISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHG 285
Query: 330 VLLK-----TLVLVNSKFDFLAEAEH---AFLEFKKRGIP-HDITTLNAMLSLYGRKKLV 380
+++K + + N+ A A A L FK+ +P D+ + N++++ +
Sbjct: 286 LVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQ--MPTKDLISWNSLMASFVNDGRS 343
Query: 381 AKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIV 440
+L M SG +++ + S + F K ++ ++ G+ + I N +
Sbjct: 344 LDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNAL 403
Query: 441 IYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGC 500
+ Y + G+M+E++R+L +M P DVV +N + YA + +A+ Q M +G
Sbjct: 404 VSMYGKIGEMSESRRVLLQM----PRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGV 459
Query: 501 KPDQNTYNSIV 511
+ T S++
Sbjct: 460 SSNYITVVSVL 470
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 115/590 (19%), Positives = 247/590 (41%), Gaps = 84/590 (14%)
Query: 9 GLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY---GKSRRP 65
G++PD+ TF L+ C A ++ L + + G+ + ++L+ Y GK P
Sbjct: 133 GVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVP 192
Query: 66 KEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTL 125
+ + + Q + V + +++ Y + G L+ ++ + M I P+ T+ +
Sbjct: 193 SKLFDRVLQKDC-------VIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCV 245
Query: 126 LSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQC 185
LS + +L +++ + +G N+L+ MY G F + K+F+ +
Sbjct: 246 LSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS---- 301
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
D VTWN +++ + Q+GL E F EM +G +P+ TF++L+ + S+ + + +
Sbjct: 302 RADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQ 361
Query: 246 VYKRMLEAGVTPDL-------------------------------STYNAVLAALARGGL 274
++ ++ ++ D+ + A+++ GL
Sbjct: 362 IHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGL 421
Query: 275 WEQSEKVLSEMENGRCKPNEVTYSSLL---------------HAYANGKEFE-------- 311
+ S ++ + + PNE+T S+L H + K F+
Sbjct: 422 YIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCA 481
Query: 312 ---------KMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPH 362
+MN LA EI+ V +++ ++ D + A F + GI +
Sbjct: 482 VIDMYAKCGRMN-LAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICY 540
Query: 363 DITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMIL 422
D +++A LS + I FM + + ++L+ ++++ N + + +
Sbjct: 541 DCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVF 600
Query: 423 REILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPV-PDVVTYNTFVATYAA 481
+ + EK I +S+N +I A +GK+ ++ + +EM + + + PD +T+ +++
Sbjct: 601 KTMKEKNI----VSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCH 656
Query: 482 NSMFGEAIGVVQCMIKQ-GCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
E + + M + G +P Q Y +VD + + EAY V ++
Sbjct: 657 VGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSM 706
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 116/555 (20%), Positives = 230/555 (41%), Gaps = 100/555 (18%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M+ ++P+ TF+ ++S C + L + ++L + ++G+ + N+LL +Y K R
Sbjct: 230 MRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGR 289
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+A ++ + M SR VT+ +IS YV+ GL+EE+L +M+ + PD T+++
Sbjct: 290 FDDASKLFRMM-SRA---DTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSS 345
Query: 125 LL-------------------------------SGFVNA----KKDELAMRVFEEMRTAG 149
LL S ++A + +A +F + +
Sbjct: 346 LLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSV- 404
Query: 150 CKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFG---QNGLDS 206
++ F A+I Y G++ + ++F+ + + SP+ +T ++L V G L
Sbjct: 405 ---DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGR 461
Query: 207 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVL 266
E+ G + + GF +I Y++CG + A +++R+ + D+ ++N+++
Sbjct: 462 ELHGF---IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKR----DIVSWNSMI 514
Query: 267 AALARGGLWEQSEKVLSEME-NGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKI 325
A+ + + +M +G C + V+ S+ L A AN L E +
Sbjct: 515 TRCAQSDNPSAAIDIFRQMGVSGICY-DCVSISAALSACAN---------LPSESF---- 560
Query: 326 TTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNK 385
+A H F+ K + D+ + + ++ +Y + +
Sbjct: 561 --------------------GKAIHGFM--IKHSLASDVYSESTLIDMYAKCGNLKAAMN 598
Query: 386 ILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEK-GIEPDLISYNIVIYAY 444
+ K M E +NS++ + S + E++EK GI PD I++ +I +
Sbjct: 599 VFKTMKEKNIV----SWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSC 654
Query: 445 CRNGKMTEAKRILNEM-KDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPD 503
C G + E R M +D P Y V + EA V+ M PD
Sbjct: 655 CHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSM---PFPPD 711
Query: 504 QNTYNSIVDWYCKLH 518
+ +++ C+LH
Sbjct: 712 AGVWGTLLG-ACRLH 725
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 112/516 (21%), Positives = 211/516 (40%), Gaps = 55/516 (10%)
Query: 20 LISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRG 79
L+ C +L + ++ + + + D T +L +Y + ++ +++ R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLR- 99
Query: 80 FPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAM 139
SI + S+IS++VR+GLL +AL +M+ + PDV T+ L+ V K +
Sbjct: 100 -RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGID 158
Query: 140 RVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVF 199
+ + + + G N ++LIK Y + G K+F + D V WN +L +
Sbjct: 159 FLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRV----LQKDCVIWNVMLNGY 214
Query: 200 GQNG-LDSEVSGVFKEMKRAGFVPERETF------------------------------- 227
+ G LDS + G F M+ P TF
Sbjct: 215 AKCGALDSVIKG-FSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFE 273
Query: 228 ----NTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLS 283
N+L+S YS+CG FD A +++ M A D T+N +++ + GL E+S
Sbjct: 274 GSIKNSLLSMYSKCGRFDDASKLFRMMSRA----DTVTWNCMISGYVQSGLMEESLTFFY 329
Query: 284 EMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFD 343
EM + P+ +T+SSLL + + + E + I I+ L L+ K
Sbjct: 330 EMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCR 389
Query: 344 FLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYN 403
++ A++ F + D+ AM+S Y L + ++ +++ + + +
Sbjct: 390 GVSMAQNIFSQCNSV----DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLV 445
Query: 404 SLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDP 463
S++ + + + I++KG + VI Y + G+M A I +
Sbjct: 446 SILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSK- 504
Query: 464 APVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQG 499
D+V++N+ + A + AI + + M G
Sbjct: 505 ---RDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSG 537
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 145/336 (43%), Gaps = 60/336 (17%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M S G+ PD TF++L+ E ++ I + D+ +AL+D Y K R
Sbjct: 330 EMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCR 389
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
A + Q S +V +T++IS Y+ +GL ++LE+ +V+ I P+ T
Sbjct: 390 GVSMAQNIFSQCNS----VDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLV 445
Query: 124 TLLS--GFVNAKKDELAMRVFEEMRTAGCK---PNICTFN-ALIKMYGDRGMFAEMGKVF 177
++L G + LA+++ E+ K N C A+I MY G ++F
Sbjct: 446 SILPVIGIL------LALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIF 499
Query: 178 KEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPE-------------- 223
+ + DIV+WN+++ Q+ S +F++M +G +
Sbjct: 500 ERLS----KRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANL 555
Query: 224 -RETF--------------------NTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTY 262
E+F +TLI Y++CG+ A V+K M E + ++
Sbjct: 556 PSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIV----SW 611
Query: 263 NAVLAALARGGLWEQSEKVLSEM-ENGRCKPNEVTY 297
N+++AA G + S + EM E +P+++T+
Sbjct: 612 NSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITF 647
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 138/340 (40%), Gaps = 48/340 (14%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTY-------- 52
M ++ SQ + D+ F +IS LY ++LE+F + + P+ +T
Sbjct: 393 MAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIG 452
Query: 53 ---------------------------NALLDVYGKSRRPKEAMEVLKQMESRGFPPSIV 85
A++D+Y K R A E+ +++ R IV
Sbjct: 453 ILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKR----DIV 508
Query: 86 TYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEM 145
++ S+I+ + A+++ QM I D + + LS N + + M
Sbjct: 509 SWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFM 568
Query: 146 RTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLD 205
++ + + LI MY G VFK +K +IV+WN+++A G +G
Sbjct: 569 IKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK----EKNIVSWNSIIAACGNHGKL 624
Query: 206 SEVSGVFKEM-KRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEA-GVTPDLSTYN 263
+ +F EM +++G P++ TF +IS+ G D+ ++ M E G+ P Y
Sbjct: 625 KDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYA 684
Query: 264 AVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
V+ R G ++ + + M P+ + +LL A
Sbjct: 685 CVVDLFGRAGRLTEAYETVKSMPF---PPDAGVWGTLLGA 721
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 159/362 (43%), Gaps = 83/362 (22%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTY-------------------- 52
D+ ++N++I+ + L E+ L +F ++ ++G+ D+ T
Sbjct: 260 DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVH 319
Query: 53 ---------------NALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRD 97
N LLD+Y K A V ++M R S+V+YTS+I+ Y R+
Sbjct: 320 SIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDR----SVVSYTSMIAGYARE 375
Query: 98 GLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTF 157
GL EA++L +M E+ I PDVYT T +L+ + + RV E ++ +I
Sbjct: 376 GLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS 435
Query: 158 NALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVF----- 212
NAL+ MY G E VF E++ DI++WNT++ + +N +E +F
Sbjct: 436 NALMDMYAKCGSMQEAELVFSEMRV----KDIISWNTIIGGYSKNCYANEALSLFNLLLE 491
Query: 213 ---------------------------KEMK----RAGFVPERETFNTLISAYSRCGSFD 241
+E+ R G+ +R N+L+ Y++CG+
Sbjct: 492 EKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALL 551
Query: 242 QARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL 301
A ++ + + DL ++ ++A G +++ + ++M + +E+++ SLL
Sbjct: 552 LAHMLFDDI----ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLL 607
Query: 302 HA 303
+A
Sbjct: 608 YA 609
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/481 (22%), Positives = 213/481 (44%), Gaps = 55/481 (11%)
Query: 53 NALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVE 112
N+L+ Y K++R A +V +M R ++++ S+I+ YV +GL E+ L + QM+
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTER----DVISWNSIINGYVSNGLAEKGLSVFVQMLV 289
Query: 113 KHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTF-NALIKMYGDRGMFA 171
I+ D+ T ++ +G +++ L R + C F N L+ MY G
Sbjct: 290 SGIEIDLATIVSVFAGCADSRLISLG-RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLD 348
Query: 172 EMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLI 231
VF+E+ +V++ +++A + + GL E +F+EM+ G P+ T ++
Sbjct: 349 SAKAVFREMS----DRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVL 404
Query: 232 SAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCK 291
+ +R D+ + V++ + E + D+ NA++ A+ G +++E V SEM R K
Sbjct: 405 NCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEM---RVK 461
Query: 292 PNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHA 351
+ +++++++ Y+ N A E S F+ L E
Sbjct: 462 -DIISWNTIIGGYSK-------NCYANEAL------------------SLFNLLLE---- 491
Query: 352 FLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSR 411
+KR P D T+ +L K +I ++ +G+ NSL+ ++++
Sbjct: 492 ----EKRFSP-DERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAK 546
Query: 412 TRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVT 471
+ M+ +I K DL+S+ ++I Y +G EA + N+M+ D ++
Sbjct: 547 CGALLLAHMLFDDIASK----DLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEIS 602
Query: 472 YNTFVATYAANSMFGEAIGVVQCMIKQGCK--PDQNTYNSIVDWYCKLHLREEAYNFVHN 529
+ + + + + + E M + CK P Y IVD + +AY F+ N
Sbjct: 603 FVSLLYACSHSGLVDEGWRFFNIM-RHECKIEPTVEHYACIVDMLARTGDLIKAYRFIEN 661
Query: 530 L 530
+
Sbjct: 662 M 662
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 110/515 (21%), Positives = 233/515 (45%), Gaps = 24/515 (4%)
Query: 24 CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPS 83
C +G+L E A++L + P T ++L + S+ K+ EV + GF
Sbjct: 72 CESGNL-ENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVID 128
Query: 84 IVTYTSLISAYVRDGLLEEALELKNQM-VEKHIKPDVYTYTTLLSGFVNAKKDELAMRVF 142
+ L Y G L+EA + +++ +EK + + L++ + ++ +F
Sbjct: 129 SNLGSKLSLMYTNCGDLKEASRVFDEVKIEKAL-----FWNILMNELAKSGDFSGSIGLF 183
Query: 143 EEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQN 202
++M ++G + + TF+ + K + ++ I N+L+A + +N
Sbjct: 184 KKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKN 243
Query: 203 GLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTY 262
VF EM + ++N++I+ Y G ++ +V+ +ML +G+ DL+T
Sbjct: 244 QRVDSARKVFDEMTERDVI----SWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATI 299
Query: 263 NAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTY-SSLLHAYANGKEFEKMNALAEEIY 321
+V A A L V S + C E + ++LL Y+ + + A+ E+
Sbjct: 300 VSVFAGCADSRLISLGRAVHS-IGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS 358
Query: 322 SGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVA 381
+ ++ +++ ++ EA F E ++ GI D+ T+ A+L+ R +L+
Sbjct: 359 DRSVVSYT----SMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLD 414
Query: 382 KTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVI 441
+ ++ +++ E+ + N+LM ++++ + +++E++ E+ K D+IS+N +I
Sbjct: 415 EGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK----DIISWNTII 470
Query: 442 YAYCRNGKMTEAKRILNEM-KDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGC 500
Y +N EA + N + ++ PD T + A+ S F + + +++ G
Sbjct: 471 GGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGY 530
Query: 501 KPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDL 535
D++ NS+VD Y K A+ +++S DL
Sbjct: 531 FSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDL 565
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/468 (20%), Positives = 200/468 (42%), Gaps = 54/468 (11%)
Query: 80 FPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAM 139
F S+ + + + G LE A++L + I P T ++L ++K +
Sbjct: 57 FDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDP--RTLCSVLQLCADSKSLKDGK 114
Query: 140 RVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVF 199
V +R G + + L MY + G E +VF E+K + WN L+
Sbjct: 115 EVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKI----EKALFWNILMNEL 170
Query: 200 GQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDL 259
++G S G+FK+M +G + TF+ + ++S S ++ +L++G
Sbjct: 171 AKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERN 230
Query: 260 STYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY-ANGKEFEKMNALAE 318
S N+++A + + + KV EM + + ++++S+++ Y +NG + ++ +
Sbjct: 231 SVGNSLVAFYLKNQRVDSARKVFDEMT----ERDVISWNSIINGYVSNGLAEKGLSVFVQ 286
Query: 319 EIYSG-----------------------KITTHAVLLK-----------TLVLVNSKFDF 344
+ SG H++ +K TL+ + SK
Sbjct: 287 MLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGD 346
Query: 345 LAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNS 404
L A+ F E R + + +M++ Y R+ L + K+ + M E G + + +
Sbjct: 347 LDSAKAVFREMSDR----SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTA 402
Query: 405 LMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPA 464
++ +R R + + + I E + D+ N ++ Y + G M EA+ + +EM+
Sbjct: 403 VLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR--- 459
Query: 465 PVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQG-CKPDQNTYNSIV 511
V D++++NT + Y+ N EA+ + ++++ PD+ T ++
Sbjct: 460 -VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL 506
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 112/472 (23%), Positives = 206/472 (43%), Gaps = 74/472 (15%)
Query: 9 GLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKE 67
G+ PD +F +I S R G L++ +E KL G D N ++D+Y K +
Sbjct: 101 GIMPDAFSFPVVIKSAGRFGILFQALVE-----KL-GFFKDPYVRNVIMDMYVKHESVES 154
Query: 68 AMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLS 127
A +V Q+ R + +IS Y + G EEA +L + M E DV ++T +++
Sbjct: 155 ARKVFDQISQRKGS----DWNVMISGYWKWGNKEEACKLFDMMPEN----DVVSWTVMIT 206
Query: 128 GFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSP 187
GF K E A + F+ M
Sbjct: 207 GFAKVKDLENARKYFDRMP---------------------------------------EK 227
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVY 247
+V+WN +L+ + QNG + +F +M R G P T+ +ISA S R++
Sbjct: 228 SVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLV 287
Query: 248 KRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG 307
K + E V + A+L A+ + + ++ +E+ R N VT+++++ Y
Sbjct: 288 KLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQR---NLVTWNAMISGYTRI 344
Query: 308 KEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPH----- 362
+ A +++ + V +L+ + + +A A +EF + I +
Sbjct: 345 GDMSS----ARQLFDTMPKRNVVSWNSLI---AGYAHNGQAALA-IEFFEDMIDYGDSKP 396
Query: 363 DITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMIL 422
D T+ ++LS G + + I+ ++ ++ L+ GY SL+++++R N +++ +
Sbjct: 397 DEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVF 456
Query: 423 REILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNT 474
E+ E+ D++SYN + A+ NG E +L++MKD PD VTY +
Sbjct: 457 DEMKER----DVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTS 504
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 145/289 (50%), Gaps = 20/289 (6%)
Query: 4 DMKSQGLAPDLCTFNTLISCC--RAG-SLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
DM G+ P+ T+ +IS C RA SL ++L +E ++ R + ALLD++
Sbjct: 254 DMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRV---RLNCFVKTALLDMHA 310
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K R + A + ++ G ++VT+ ++IS Y R G + A +L + M +++ V
Sbjct: 311 KCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRN----VV 363
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAG-CKPNICTFNALIKMYGDRGMFAEMGK-VFK 178
++ +L++G+ + + LA+ FE+M G KP+ T +++ G E+G +
Sbjct: 364 SWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADL-ELGDCIVD 422
Query: 179 EIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 238
I+ Q + + +L+ ++ + G E VF EMK V ++NTL +A++ G
Sbjct: 423 YIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVV----SYNTLFTAFAANG 478
Query: 239 SFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMEN 287
+ + +M + G+ PD TY +VL A R GL ++ +++ + N
Sbjct: 479 DGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN 527
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 185/429 (43%), Gaps = 64/429 (14%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
D++ +G + TF ++++ C + S +++ I +G + ++ +AL+D+Y K R
Sbjct: 217 DLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCR 276
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ A +L+ ME +V++ S+I VR GL+ EAL + +M E+ +K D +T
Sbjct: 277 EMESARALLEGME----VDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIP 332
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTF----NALIKMYGDRGMFAEMGKVFKE 179
++L+ F ++ + M++ K T+ NAL+ MY RG+ KVF+
Sbjct: 333 SILNCFALSRTE---MKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEG 389
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPER--------------- 224
+ D+++W L+ NG E +F M+ G P++
Sbjct: 390 M----IEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTL 445
Query: 225 --------------------ETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNA 264
N+L++ Y++CGS + A ++ M DL T+
Sbjct: 446 LEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSM----EIRDLITWTC 501
Query: 265 VLAALARGGLWEQSEKVLSEMENG-RCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSG 323
++ A+ GL E +++ M P Y+ ++ + +F K+ L ++
Sbjct: 502 LIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQM--- 558
Query: 324 KITTHAVLLKTLVLVNSKFDFLAEAEHA---FLEFK-KRGIPHDITTLNAMLSLYGRKKL 379
++ A + K ++ + K + E A +E + +P+ L+ M S GR+
Sbjct: 559 EVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPY--VQLSNMYSAAGRQDE 616
Query: 380 VAKTNKILK 388
A +++K
Sbjct: 617 AANVRRLMK 625
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/549 (20%), Positives = 220/549 (40%), Gaps = 90/549 (16%)
Query: 31 EEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSL 90
+EA ++F+++ D T+N ++ Y SRR +A ++ + + + +++ +L
Sbjct: 45 DEARQMFDKMP----ERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVK----NTISWNAL 96
Query: 91 ISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
IS Y + G EA L +M IKP+ YT ++L + ++ G
Sbjct: 97 ISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGF 156
Query: 151 KPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG 210
++ N L+ MY +E +F+ ++ + VTW ++L + QNG +
Sbjct: 157 DLDVNVVNGLLAMYAQCKRISEAEYLFETMEG---EKNNVTWTSMLTGYSQNGFAFKAIE 213
Query: 211 VFKEMKRAGFVPERETF-----------------------------------NTLISAYS 235
F++++R G + TF + LI Y+
Sbjct: 214 CFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYA 273
Query: 236 RCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEV 295
+C + ARA +LE D+ ++N+++ R GL ++ + M K ++
Sbjct: 274 KCREMESARA----LLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDF 329
Query: 296 TYSSLLHAYANGKEFEKM--------------------NALAE------------EIYSG 323
T S+L+ +A + K+ NAL + +++ G
Sbjct: 330 TIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEG 389
Query: 324 KITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKT 383
I + LV N+ EA F + GI D ++LS L+
Sbjct: 390 MIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFG 449
Query: 384 NKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYA 443
++ +SGF SL NSL+ ++++ + + +I + + DLI++ +I
Sbjct: 450 QQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIR----DLITWTCLIVG 505
Query: 444 YCRNGKMTEAKRILNEMKDPAPV-PDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKP 502
Y +NG + +A+R + M+ + P Y + + + G+ + V Q + + +P
Sbjct: 506 YAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRS---GDFVKVEQLLHQMEVEP 562
Query: 503 DQNTYNSIV 511
D + +I+
Sbjct: 563 DATVWKAIL 571
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 114/553 (20%), Positives = 220/553 (39%), Gaps = 93/553 (16%)
Query: 16 TFNTLISC-CRAGSLYEEALELFEEIKLAGLRP--------------------------- 47
++N LIS C++GS E A LF E++ G++P
Sbjct: 92 SWNALISGYCKSGSKVE-AFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGH 150
Query: 48 --------DMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGL 99
D+ N LL +Y + +R EA + + ME + VT+TS+++ Y ++G
Sbjct: 151 TIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGE---KNNVTWTSMLTGYSQNGF 207
Query: 100 LEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNA 159
+A+E + + + + YT+ ++L+ + + ++V + +G K NI +A
Sbjct: 208 AFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSA 267
Query: 160 LIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMK--- 216
LI MY EM ++ + D+V+WN+++ + GL E +F M
Sbjct: 268 LIDMYAK---CREMESARALLEGMEVD-DVVSWNSMIVGCVRQGLIGEALSMFGRMHERD 323
Query: 217 ---------------------------------RAGFVPERETFNTLISAYSRCGSFDQA 243
+ G+ + N L+ Y++ G D A
Sbjct: 324 MKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSA 383
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
V++ M+E D+ ++ A++ G ++++ K+ M G P+++ +S+L A
Sbjct: 384 LKVFEGMIE----KDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSA 439
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
A E + + + +LV + +K L +A F + R D
Sbjct: 440 SAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIR----D 495
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYES-GFTLSLPGYNSLMYLHSRTRNFRKSEMIL 422
+ T ++ Y + L+ + M G T Y ++ L R+ +F K E +L
Sbjct: 496 LITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLL 555
Query: 423 REILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAAN 482
++ +EPD + ++ A ++G + +R + + P + V Y Y+A
Sbjct: 556 HQM---EVEPDATVWKAILAASRKHGNIENGERAAKTLMELEP-NNAVPYVQLSNMYSAA 611
Query: 483 SMFGEAIGVVQCM 495
EA V + M
Sbjct: 612 GRQDEAANVRRLM 624
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 125/288 (43%), Gaps = 28/288 (9%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVL 72
D+ ++ L++ Y+EAL+LF +++ G+ PD + ++L + + +V
Sbjct: 394 DVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVH 453
Query: 73 KQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNA 132
GFP S+ SL++ Y + G LE+A + N M + D+ T+T L+ G+
Sbjct: 454 GNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIR----DLITWTCLIVGYAKN 509
Query: 133 KKDELAMRVFEEMRTA-GCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVT 191
E A R F+ MRT G P + +I ++G G F ++ ++ ++ + PD
Sbjct: 510 GLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQM---EVEPDATV 566
Query: 192 WNTLLAVFGQNG---LDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYK 248
W +LA ++G + E++ VP + L + YS G D+A V +
Sbjct: 567 WKAILAASRKHGNIENGERAAKTLMELEPNNAVP----YVQLSNMYSAAGRQDEAANVRR 622
Query: 249 RMLEAGVTPDLSTYNAVLAALARGGLW-EQSEKVLSEMENGRCKPNEV 295
M ++ + G W E+ KV S M R P V
Sbjct: 623 LMKSRNISKE------------PGCSWVEEKGKVHSFMSEDRRHPRMV 658
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/435 (20%), Positives = 186/435 (42%), Gaps = 24/435 (5%)
Query: 90 LISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAG 149
L+ + G ++EA ++ ++M E+ D +T+ T++ + N+++ A ++F R+
Sbjct: 34 LLGDLSKSGRVDEARQMFDKMPER----DEFTWNTMIVAYSNSRRLSDAEKLF---RSNP 86
Query: 150 CKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVS 209
K N ++NALI Y G E +F E+++ P+ T ++L + L
Sbjct: 87 VK-NTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGE 145
Query: 210 GVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAAL 269
+ + GF + N L++ Y++C +A +++ M G ++ T+ ++L
Sbjct: 146 QIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETM--EGEKNNV-TWTSMLTGY 202
Query: 270 ARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHA 329
++ G ++ + ++ + N+ T+ S+L A A+ + I T+
Sbjct: 203 SQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNI 262
Query: 330 VLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKF 389
+ L+ + +K + E+ A LE + D+ + N+M+ R+ L+ + +
Sbjct: 263 YVQSALIDMYAKCREM-ESARALLEGME---VDDVVSWNSMIVGCVRQGLIGEALSMFGR 318
Query: 390 MYESGFTL---SLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCR 446
M+E + ++P + L S L I++ G + N ++ Y +
Sbjct: 319 MHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCL--IVKTGYATYKLVNNALVDMYAK 376
Query: 447 NGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNT 506
G M A ++ M + DV+++ V N + EA+ + M G PD+
Sbjct: 377 RGIMDSALKVFEGMIEK----DVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIV 432
Query: 507 YNSIVDWYCKLHLRE 521
S++ +L L E
Sbjct: 433 TASVLSASAELTLLE 447
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/273 (19%), Positives = 125/273 (45%), Gaps = 11/273 (4%)
Query: 263 NAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYS 322
N +L L++ G +++ ++ +M + +E T+++++ AY+N + AE+++
Sbjct: 32 NLLLGDLSKSGRVDEARQMFDKMP----ERDEFTWNTMIVAYSNSRRLSD----AEKLFR 83
Query: 323 GKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAK 382
+ + L+ K EA + F E + GI + TL ++L + L+ +
Sbjct: 84 SNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLR 143
Query: 383 TNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIY 442
+I ++GF L + N L+ ++++ + ++E + E +E E + +++ ++
Sbjct: 144 GEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLF-ETMEG--EKNNVTWTSMLT 200
Query: 443 AYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKP 502
Y +NG +A +++ + T+ + + A+ S + V C++K G K
Sbjct: 201 GYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKT 260
Query: 503 DQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDL 535
+ ++++D Y K E A + + D+
Sbjct: 261 NIYVQSALIDMYAKCREMESARALLEGMEVDDV 293
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 137/269 (50%), Gaps = 9/269 (3%)
Query: 55 LLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEK- 113
++ +YGK+ + A +V ++M +R S++++ +L+SAY + EL N++ K
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL 174
Query: 114 HIKPDVYTYTTLLSGFVNAKKDEL--AMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFA 171
IKPD+ +Y TL+ +KD L A+ + +E+ G KP+I TFN L+ +G F
Sbjct: 175 SIKPDIVSYNTLIKAL--CEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFE 232
Query: 172 EMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLI 231
+++ ++ + DI T+N L E+ +F E+K +G P+ +FN +I
Sbjct: 233 LGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMI 292
Query: 232 SAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCK 291
G D+A A YK +++ G PD +T+ +L A+ + G +E + ++ E + R
Sbjct: 293 RGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYL 352
Query: 292 PNEVTYSSLLHAYANGKEFEKMNALAEEI 320
+ T L+ G + E+ AEEI
Sbjct: 353 VGQTTLQQLVDELVKGSKREE----AEEI 377
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 134/280 (47%), Gaps = 7/280 (2%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
DM +G A +IS ++E A ++FEE+ + ++++NALL Y S+
Sbjct: 105 DMSKEGFAA------RIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSK 158
Query: 64 RPKEAMEVLKQMESR-GFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
+ E+ ++ + P IV+Y +LI A L EA+ L +++ K +KPD+ T+
Sbjct: 159 KFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTF 218
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
TLL + EL ++ +M +I T+NA + + E+ +F E+KA
Sbjct: 219 NTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKA 278
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
PD+ ++N ++ G E +KE+ + G+ P++ TF L+ A + G F+
Sbjct: 279 SGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFES 338
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVL 282
A ++K +T ++ L +G E++E+++
Sbjct: 339 AIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIV 378
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 128/248 (51%), Gaps = 5/248 (2%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEI--KLAGLRPDMVTYNALLDVYGK 61
+M ++ + +FN L+S R ++ ELF E+ KL+ ++PD+V+YN L+ +
Sbjct: 134 EMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLS-IKPDIVSYNTLIKALCE 192
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTY-TSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
EA+ +L ++E++G P IVT+ T L+S+Y++ G E E+ +MVEK++ D+
Sbjct: 193 KDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLK-GQFELGEEIWAKMVEKNVAIDIR 251
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY L G N K + + +F E++ +G KP++ +FNA+I+ + G E +KEI
Sbjct: 252 TYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEI 311
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
PD T+ LL + G +FKE ++ + T L+ +
Sbjct: 312 VKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKR 371
Query: 241 DQARAVYK 248
++A + K
Sbjct: 372 EEAEEIVK 379
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 142/334 (42%), Gaps = 46/334 (13%)
Query: 43 AGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQM-ESRGFPPSIVTYTSLISAYV---RDG 98
A + P + +L++ R PK +E K+ ES F +I Y + V R
Sbjct: 35 AAISPPQKSLTSLVN---GERNPKRIVEKFKKACESERFRTNIAVYDRTVRRLVAAKRLH 91
Query: 99 LLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFN 158
+EE LE Q + + + + ++S + A E A +VFEEM CK ++ +FN
Sbjct: 92 YVEEILE--EQKKYRDMSKEGFA-ARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFN 148
Query: 159 ALIKMYGDRGMFAEMGKVFKEIKA-CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKR 217
AL+ Y F + ++F E+ PDIV++NTL+ + E + E++
Sbjct: 149 ALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIEN 208
Query: 218 AGFVPERETFNTLISAYSRCGSFDQARAVYKRMLE------------------------- 252
G P+ TFNTL+ + G F+ ++ +M+E
Sbjct: 209 KGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKE 268
Query: 253 ----------AGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
+G+ PD+ ++NA++ G +++E E+ +P++ T++ LL
Sbjct: 269 LVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLP 328
Query: 303 AYANGKEFEKMNALAEEIYSGKITTHAVLLKTLV 336
A +FE L +E +S + L+ LV
Sbjct: 329 AMCKAGDFESAIELFKETFSKRYLVGQTTLQQLV 362
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 3/266 (1%)
Query: 265 VLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGK 324
+++ + G++E ++KV EM N CK + +++++LL AY K+F+ + L E+ GK
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNEL-PGK 173
Query: 325 ITTHA--VLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAK 382
++ V TL+ + D L EA E + +G+ DI T N +L K
Sbjct: 174 LSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFEL 233
Query: 383 TNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIY 442
+I M E + + YN+ + + ++ + E+ G++PD+ S+N +I
Sbjct: 234 GEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIR 293
Query: 443 AYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKP 502
GKM EA+ E+ PD T+ + F AI + + +
Sbjct: 294 GSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLV 353
Query: 503 DQNTYNSIVDWYCKLHLREEAYNFVH 528
Q T +VD K REEA V
Sbjct: 354 GQTTLQQLVDELVKGSKREEAEEIVK 379
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 112/260 (43%), Gaps = 1/260 (0%)
Query: 113 KHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAE 172
+ + ++ Y + V AK+ + EE + +I +YG GMF
Sbjct: 68 ERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFEN 127
Query: 173 MGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMK-RAGFVPERETFNTLI 231
KVF+E+ C ++++N LL+ + + V +F E+ + P+ ++NTLI
Sbjct: 128 AQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLI 187
Query: 232 SAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCK 291
A S +A A+ + G+ PD+ T+N +L + G +E E++ ++M
Sbjct: 188 KALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVA 247
Query: 292 PNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHA 351
+ TY++ L AN + +++ L E+ + + ++ + + EAE
Sbjct: 248 IDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAW 307
Query: 352 FLEFKKRGIPHDITTLNAML 371
+ E K G D T +L
Sbjct: 308 YKEIVKHGYRPDKATFALLL 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 76/144 (52%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +++++GL PD+ TFNTL+ +E E++ ++ + D+ TYNA L
Sbjct: 202 LLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLA 261
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ KE + + ++++ G P + ++ ++I + +G ++EA ++V+ +PD
Sbjct: 262 NEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKA 321
Query: 121 TYTTLLSGFVNAKKDELAMRVFEE 144
T+ LL A E A+ +F+E
Sbjct: 322 TFALLLPAMCKAGDFESAIELFKE 345
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 142/308 (46%), Gaps = 20/308 (6%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+LM+M + + P++ T + ++ C LE+ + + +MV N+L+D Y
Sbjct: 414 LLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYA 473
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
SR+ A V++ M+ R +TYTSL++ + G E AL + N M I+ D
Sbjct: 474 SSRKVDYAWNVIRSMKRR----DNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQL 529
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNI----CTFNALIKMYGDRGMFAEMGKV 176
+ L GF++A + A+ + + K N+L+ MY G + KV
Sbjct: 530 S----LPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKV 585
Query: 177 FKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 236
F+EI +PD+V+WN L++ NG S F+EM+ P+ TF L+SA S
Sbjct: 586 FEEI----ATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSN 641
Query: 237 CGSFDQARAVYKRMLEA-GVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEV 295
D ++ M + + P + Y ++ L R G E++ V+ M KPN +
Sbjct: 642 GRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMH---LKPNAM 698
Query: 296 TYSSLLHA 303
+ +LL A
Sbjct: 699 IFKTLLRA 706
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 118/525 (22%), Positives = 217/525 (41%), Gaps = 64/525 (12%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVL 72
D ++ +IS + EAL+ + E+ AG+ P+ T+ LL G S +E
Sbjct: 189 DTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLL---GASSFL--GLEFG 243
Query: 73 KQMES----RGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSG 128
K + S RG P ++V TSL+ Y + +E+A+ + N E+ DV+ +T+++SG
Sbjct: 244 KTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQ----DVFLWTSVVSG 299
Query: 129 FVNAKKDELAMRVFEEMRTAGCKPNICTF------------------------------- 157
FV + + A+ F EMR+ G +PN T+
Sbjct: 300 FVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDS 359
Query: 158 ----NALIKMYGD-RGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVF 212
NAL+ MY E +VF SP++V+W TL+ +G + G+
Sbjct: 360 TDVGNALVDMYMKCSASEVEASRVF----GAMVSPNVVSWTTLILGLVDHGFVQDCFGLL 415
Query: 213 KEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARG 272
EM + P T + ++ A S+ + ++ +L V ++ N+++ A A
Sbjct: 416 MEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASS 475
Query: 273 GLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLL 332
+ + V+ M+ + + +TY+SL+ + + E ++ +Y I + L
Sbjct: 476 RKVDYAWNVIRSMK----RRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSL 531
Query: 333 KTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYE 392
+ ++ L +H K G + LN+++ +Y + + K+ +E
Sbjct: 532 PGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKV----FE 587
Query: 393 SGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTE 452
T + +N L+ + + E+ K EPD +++ I++ A C NG++T+
Sbjct: 588 EIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSA-CSNGRLTD 646
Query: 453 -AKRILNEMKDPAPV-PDVVTYNTFVATYAANSMFGEAIGVVQCM 495
MK + P V Y V EA GVV+ M
Sbjct: 647 LGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETM 691
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/564 (20%), Positives = 227/564 (40%), Gaps = 105/564 (18%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M + G P+ TF++++ C + + G + V ++L D+Y K
Sbjct: 114 EMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCG 173
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ KEA E+ +++ +++T +IS+ V EAL+ ++MV+ + P+ +T+
Sbjct: 174 QFKEACELFSSLQN----ADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFV 229
Query: 124 TLL--SGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK 181
LL S F+ E + + G N+ +L+ Y F++M + +
Sbjct: 230 KLLGASSFLGL---EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQ---FSKMEDAVRVLN 283
Query: 182 ACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFD 241
+ D+ W ++++ F +N E G F EM+ G P T++ ++S S S D
Sbjct: 284 S-SGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLD 342
Query: 242 QARAVYKRMLEAG--------------------------------VTPDLSTYNAVLAAL 269
+ ++ + ++ G V+P++ ++ ++ L
Sbjct: 343 FGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGL 402
Query: 270 ARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHA 329
G + +L EM +PN VT S +L A + + ++ + HA
Sbjct: 403 VDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRV-----------LEIHA 451
Query: 330 VLLKT-----LVLVNSKFDFLAE------AEHAFLEFKKRGIPHDITTLNAMLSLYGRKK 378
LL+ +V+ NS D A A + K+R D T ++++ +
Sbjct: 452 YLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRR----DNITYTSLVTRFNELG 507
Query: 379 LVAKTNKILKFMYESGF---TLSLPGYNSL------------MYLHSRTRNFRKSEMILR 423
++ +MY G LSLPG+ S ++ +S F + +L
Sbjct: 508 KHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLN 567
Query: 424 EILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANS 483
+++ +Y+ C G + +AK++ E+ PDVV++N V+ A+N
Sbjct: 568 SLVD-------------MYSKC--GSLEDAKKVFEEI----ATPDVVSWNGLVSGLASNG 608
Query: 484 MFGEAIGVVQCMIKQGCKPDQNTY 507
A+ + M + +PD T+
Sbjct: 609 FISSALSAFEEMRMKETEPDSVTF 632
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 142/343 (41%), Gaps = 48/343 (13%)
Query: 2 LMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGK 61
++M+S GL P+ T++ ++S C A + ++ + G NAL+D+Y K
Sbjct: 313 FLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMK 372
Query: 62 -SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
S EA V M S P++V++T+LI V G +++ L +MV++ ++P+V
Sbjct: 373 CSASEVEASRVFGAMVS----PNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVV 428
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
T + +L + + + + + N+L+ Y V + +
Sbjct: 429 TLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSM 488
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEM------------------------- 215
K D +T+ +L+ F + G V M
Sbjct: 489 K----RRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGAL 544
Query: 216 ----------KRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAV 265
++GF N+L+ YS+CGS + A+ V++ + TPD+ ++N +
Sbjct: 545 ETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEI----ATPDVVSWNGL 600
Query: 266 LAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGK 308
++ LA G + EM +P+ VT+ LL A +NG+
Sbjct: 601 VSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGR 643
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 99/457 (21%), Positives = 199/457 (43%), Gaps = 31/457 (6%)
Query: 95 VRDGLLEEALELKNQMVEKHIKPD----------------VYTYTTLLSGFVNAKKDELA 138
++ GLLE L+L N ++ ++K D V+ +T ++S F +++ A
Sbjct: 50 IKFGLLEN-LDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASA 108
Query: 139 MRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAV 198
+ +FEEM +G PN TF+++++ + G+V + + V ++L +
Sbjct: 109 LSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDL 168
Query: 199 FGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPD 258
+ + G E +F ++ A + ++ +IS+ + +A Y M++AGV P+
Sbjct: 169 YSKCGQFKEACELFSSLQNADTI----SWTMMISSLVGARKWREALQFYSEMVKAGVPPN 224
Query: 259 LSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAE 318
T+ +L A + GL E + + S + N V +SL+ Y+ +F KM
Sbjct: 225 EFTFVKLLGASSFLGL-EFGKTIHSNIIVRGIPLNVVLKTSLVDFYS---QFSKMEDAVR 280
Query: 319 EIYSGKITTHAVLLKTLVLVNSKFDFLA-EAEHAFLEFKKRGIPHDITTLNAMLSLYGRK 377
+ S V L T V+ + A EA FLE + G+ + T +A+LSL
Sbjct: 281 VLNSSG--EQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAV 338
Query: 378 KLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISY 437
+ + +I + GF S N+L+ ++ + SE+ + + P+++S+
Sbjct: 339 RSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKC---SASEVEASRVFGAMVSPNVVSW 395
Query: 438 NIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIK 497
+I +G + + +L EM P+VVT + + + + + +++
Sbjct: 396 TTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLR 455
Query: 498 QGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLD 534
+ + NS+VD Y + A+N + ++ D
Sbjct: 456 RHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRD 492
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 107/556 (19%), Positives = 217/556 (39%), Gaps = 78/556 (14%)
Query: 44 GLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEA 103
GL ++ N LL +Y K+ A ++ +M R ++ +T +ISA+ + A
Sbjct: 53 GLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHR----TVFAWTVMISAFTKSQEFASA 108
Query: 104 LELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKM 163
L L +M+ P+ +T+++++ + RV + G + N ++L +
Sbjct: 109 LSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDL 168
Query: 164 YGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPE 223
Y G F E ++F ++ + D ++W +++ E + EM +AG P
Sbjct: 169 YSKCGQFKEACELFSSLQ----NADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPN 224
Query: 224 RETFNTLISAYSRCGSFDQARAVYK-------------------------------RMLE 252
TF L+ A S G + + ++ R+L
Sbjct: 225 EFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLN 283
Query: 253 AGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL----------- 301
+ D+ + +V++ R +++ EM + +PN TYS++L
Sbjct: 284 SSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDF 343
Query: 302 ----HAYANGKEFEKM----NAL-------------AEEIYSGKITTHAVLLKTLVLVNS 340
H+ FE NAL A ++ ++ + V TL+L
Sbjct: 344 GKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLV 403
Query: 341 KFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLP 400
F+ + +E KR + ++ TL+ +L + + V + +I ++ +
Sbjct: 404 DHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMV 463
Query: 401 GYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEM 460
NSL+ ++ +R + ++R + + D I+Y ++ + GK A ++N M
Sbjct: 464 VGNSLVDAYASSRKVDYAWNVIRSMKRR----DNITYTSLVTRFNELGKHEMALSVINYM 519
Query: 461 KDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCM-IKQGCKPDQNTYNSIVDWYCKLHL 519
D ++ F++ +AN E + C +K G + NS+VD Y K
Sbjct: 520 YGDGIRMDQLSLPGFISA-SANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGS 578
Query: 520 REEAYNFVHNLSSLDL 535
E+A +++ D+
Sbjct: 579 LEDAKKVFEEIATPDV 594
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 90/229 (39%), Gaps = 32/229 (13%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV 71
PD+ ++N L+S + AL FEE+++ PD VT+ LL R +E
Sbjct: 592 PDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEY 651
Query: 72 LKQMES-RGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLL---- 126
+ M+ P + Y L+ R G LEEA + M H+KP+ + TLL
Sbjct: 652 FQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETM---HLKPNAMIFKTLLRACR 708
Query: 127 -------------SGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEM 173
G A D + ++ KP + + ++ + ++
Sbjct: 709 YRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELA--QKTRNLMTEKRLSKKL 766
Query: 174 GKVFKEIKA---CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAG 219
GK E++ S D+ V NG+ +E+ + +E+KR G
Sbjct: 767 GKSTVEVQGKVHSFVSEDVTR------VDKTNGIYAEIESIKEEIKRFG 809
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 155/348 (44%), Gaps = 51/348 (14%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGL--------------------------- 45
D ++N +IS YE +L F E++ G
Sbjct: 315 DFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLH 374
Query: 46 ------RPDMVTY--NALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRD 97
D + + N+L+D+Y K +EA + K + R + V++T+LIS YV+
Sbjct: 375 CQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQR----TTVSWTALISGYVQK 430
Query: 98 GLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTF 157
GL L+L +M +++ D T+ T+L + L ++ + +G N+ +
Sbjct: 431 GLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSG 490
Query: 158 NALIKMYGDRGMFAEMGKVFKEIKACQCSPD--IVTWNTLLAVFGQNGLDSEVSGVFKEM 215
+ L+ MY G + +VF+E+ PD V+WN L++ NG G F +M
Sbjct: 491 SGLVDMYAKCGSIKDAVQVFEEM------PDRNAVSWNALISAHADNGDGEAAIGAFAKM 544
Query: 216 KRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEA-GVTPDLSTYNAVLAALARGGL 274
+G P+ + +++A S CG +Q ++ M G+TP Y +L L R G
Sbjct: 545 IESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGR 604
Query: 275 WEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYS 322
+ ++EK++ EM +P+E+ +SS+L+A K AE+++S
Sbjct: 605 FAEAEKLMDEMP---FEPDEIMWSSVLNACRIHKNQSLAERAAEKLFS 649
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 118/532 (22%), Positives = 222/532 (41%), Gaps = 59/532 (11%)
Query: 9 GLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEA 68
G D C N ++ A ++++E+ + V+ N ++ + K+ A
Sbjct: 43 GFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMP----HKNTVSTNTMISGHVKTGDVSSA 98
Query: 69 MEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKH--IKPDVYTYTTLL 126
++ M R ++VT+T L+ Y R+ +EA +L QM PD T+TTLL
Sbjct: 99 RDLFDAMPDR----TVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLL 154
Query: 127 SGFVNAKKDELAMRVFEEMRTAG--CKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
G +A +V G P + N L+K Y + +F+EI
Sbjct: 155 PGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP--- 211
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
D VT+NTL+ + ++GL +E +F +M+++G P TF+ ++ A F +
Sbjct: 212 -EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQ 270
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
++ + G + D S N +L ++ ++ + EM + + V+Y+ ++ +Y
Sbjct: 271 QLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP----ELDFVSYNVVISSY 326
Query: 305 ANGKEFE----------------------KMNALAEEIYS---GKITTHAVLLKT----L 335
+ ++E M ++A + S G+ LL T L
Sbjct: 327 SQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSIL 386
Query: 336 VLVNSKFDFLAEA---EHAFLEFKKRGIPHDIT-TLNAMLSLYGRKKLVAKTNKILKFMY 391
+ NS D A+ E A L FK +P T + A++S Y +K L K+ M
Sbjct: 387 HVGNSLVDMYAKCEMFEEAELIFK--SLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR 444
Query: 392 ESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMT 451
S + +++ + + + + I+ G ++ S + ++ Y + G +
Sbjct: 445 GSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIK 504
Query: 452 EAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPD 503
+A ++ EM P + V++N ++ +A N AIG MI+ G +PD
Sbjct: 505 DAVQVFEEM----PDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPD 552
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 102/502 (20%), Positives = 205/502 (40%), Gaps = 84/502 (16%)
Query: 12 PDLCTFNTLISCCR-------AGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
PD TF TL+ C G ++ A++L + P + N LL Y + RR
Sbjct: 145 PDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTN-----PFLTVSNVLLKSYCEVRR 199
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
A + +++ + VT+ +LI+ Y +DGL E++ L +M + +P +T++
Sbjct: 200 LDLACVLFEEIPEK----DSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSG 255
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
+L V L ++ T G + N ++ Y E +F E+
Sbjct: 256 VLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPEL- 314
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
D V++N +++ + Q F+EM+ GF F T++S + S R
Sbjct: 315 ---DFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGR 371
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
++ + L A L N+++ A+ ++E++E + + + V++++L+ Y
Sbjct: 372 QLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP----QRTTVSWTALISGY 427
Query: 305 -------ANGKEFEKM---NALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLE 354
A K F KM N A++ +T A +LK S L + HAF+
Sbjct: 428 VQKGLHGAGLKLFTKMRGSNLRADQ------STFATVLKASASFASLL--LGKQLHAFI- 478
Query: 355 FKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRN 414
+ G ++ + + ++ +Y + + ++ + M + +N+L+ H+ +
Sbjct: 479 -IRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAV----SWNALISAHADNGD 533
Query: 415 FRKSEMILREILEKGIEPDLISYNIVIYA--YC--------------------------- 445
+ +++E G++PD +S V+ A +C
Sbjct: 534 GEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYA 593
Query: 446 -------RNGKMTEAKRILNEM 460
RNG+ EA+++++EM
Sbjct: 594 CMLDLLGRNGRFAEAEKLMDEM 615
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 125/559 (22%), Positives = 222/559 (39%), Gaps = 111/559 (19%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV 71
PD FN +++ C ++ +LFEE+ PD++TYN ++ + + R + + V
Sbjct: 234 PDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFV 293
Query: 72 LKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKH----------------- 114
L+++ +G + T SL++AYV G L A + M EK
Sbjct: 294 LERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLKE 353
Query: 115 ------IKPDVYTYTTLLSGFVNAKKDELA----MRVFEEMRTAGCK------------- 151
+ SG+ + +DE++ + VF+++
Sbjct: 354 KEEEEAEDDEDAFEDDEDSGY--SARDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFA 411
Query: 152 PNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ---CSPDIVTWNTLLAVFGQNGLDSEV 208
P+ + L+K Y G A+ ++ + ++ PD VT+ T+++ F GL
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 209 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLE-AGVTPDLSTYNAVLA 267
V EM R G R T+N L+ Y + D+A + + M E AG+ PD+ +YN ++
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 268 ALARGGLWEQSEKVLS---EMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGK 324
L + S L+ EM P +++Y++L+ A+A SG+
Sbjct: 532 GCI---LIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA---------------MSGQ 573
Query: 325 ITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTN 384
L N FD + + D+ N ++ Y R L+
Sbjct: 574 PK----------LANRVFDEMMNDPR---------VKVDLIAWNMLVEGYCRLGLIEDAQ 614
Query: 385 KILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAY 444
+++ M E+GF ++ Y SL S+ R + ++ +EI E+
Sbjct: 615 RVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKER---------------- 658
Query: 445 CRNGKMTEAKRILNEMKDPAPV---PDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCK 501
C K EA + DPAP PD +T + F +A+ ++ CM + G
Sbjct: 659 C-AVKKKEAPS--DSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIP 715
Query: 502 PDQNTYNSIVDWYCKLHLR 520
P++ Y I Y ++H R
Sbjct: 716 PNKTKYKKI---YVEMHSR 731
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 98/469 (20%), Positives = 187/469 (39%), Gaps = 35/469 (7%)
Query: 90 LISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKD--ELAMRVF----- 142
L A + G A+ + M+ P V +T ++ + D E ++++F
Sbjct: 159 LAMAAAKSGQTLYAVSVIKSMIRSGYLPHVKAWTAAVASLSASGDDGPEESIKLFIAITR 218
Query: 143 ------EEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLL 196
++ +P+ FNA++ + G + K+F+E+ C PD++T+N ++
Sbjct: 219 RVKRFGDQSLVGQSRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMI 278
Query: 197 AVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEA--G 254
+ + G + V + + G T ++L++AY G A + + M E
Sbjct: 279 KLCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRD 338
Query: 255 VTPDLSTYN-AVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY----ANGKE 309
+ L N L + + + ++G +EV+ ++ + N +
Sbjct: 339 LCKVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVD 398
Query: 310 FEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNA 369
L ++++ + L+K + N + A A R D T
Sbjct: 399 PSGEPPLLPKVFAPDSRIYTTLMKGY-MKNGRVADTARMLEAMRRQDDRNSHPDEVTYTT 457
Query: 370 MLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEK- 428
++S + L+ + ++L M G + YN L+ + + ++E +LRE+ E
Sbjct: 458 VVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDA 517
Query: 429 GIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYA-------A 481
GIEPD++SYNI+I A NEM+ P ++Y T + +A A
Sbjct: 518 GIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLA 577
Query: 482 NSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
N +F E M K D +N +V+ YC+L L E+A V +
Sbjct: 578 NRVFDE------MMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRM 620
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
Query: 9 GLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEA 68
G+ PD+ ++N +I C AL F E++ G+ P ++Y L+ + S +PK A
Sbjct: 518 GIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLA 577
Query: 69 MEVLKQM-ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLS 127
V +M ++ + L+ Y R GL+E+A + ++M E P+V TY +L +
Sbjct: 578 NRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLAN 637
Query: 128 GFVNAKKDELAMRVFEEMR 146
G A+K A+ +++E++
Sbjct: 638 GVSQARKPGDALLLWKEIK 656
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 124/230 (53%), Gaps = 10/230 (4%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEI--KLAGLRPDMVTYNALLDVYGKS 62
M G +FN L++ C +++ +LF+EI + + PD ++Y L+ Y S
Sbjct: 128 MDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDS 187
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
P++A+E+++QM+ +G + + +T+++S+ + G LE A L N+MV+K + D Y
Sbjct: 188 GTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAY 247
Query: 123 TTLLSGFVNAKKD--ELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
+ ++A+K+ E + EEM + G KP+ ++N L+ Y +RGM E KV++ +
Sbjct: 248 NVRI---MSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGL 304
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTL 230
+ C+P+ T+ TL+ + L + +FK+ +P+ FNTL
Sbjct: 305 EGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPD---FNTL 351
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 124/257 (48%), Gaps = 7/257 (2%)
Query: 17 FNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQME 76
++TLI S++ A+ FE++ G V++NALL+ S+ + ++ ++
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 77 SR--GFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKK 134
R P ++Y LI +Y G E+A+E+ QM K ++ +TT+LS +
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 135 DELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNT 194
E+A ++ EM GC+ + +N I M + + ++ +E+ + PD +++N
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRI-MSAQKESPERVKELIEEMSSMGLKPDTISYNY 283
Query: 195 LLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLIS--AYSRCGSFDQARAVYKRMLE 252
L+ + + G+ E V++ ++ P TF TLI YSR ++Q A++K+ +
Sbjct: 284 LMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRL--YEQGYAIFKKSVY 341
Query: 253 AGVTPDLSTYNAVLAAL 269
PD +T ++ L
Sbjct: 342 MHKIPDFNTLKHLVVGL 358
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 108/228 (47%), Gaps = 3/228 (1%)
Query: 52 YNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMV 111
Y+ L+ YG++ AM +QM+ G P S V++ +L++A + ++ +L +++
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 112 EKH--IKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGM 169
+++ I PD +Y L+ + ++ E A+ + +M+ G + F ++ +G
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 170 FAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNT 229
++ E+ C D +N + + Q V + +EM G P+ ++N
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRI-MSAQKESPERVKELIEEMSSMGLKPDTISYNY 283
Query: 230 LISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQ 277
L++AY G D+A+ VY+ + P+ +T+ ++ L L+EQ
Sbjct: 284 LMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQ 331
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 162/364 (44%), Gaps = 20/364 (5%)
Query: 31 EEALELFEEIKLAGLRPDMVTYNALLDV--YGKSRRPKEAMEVLKQMESRGFPPSIVT-- 86
++AL+++ + P Y L V K RR + +E L +ES P I
Sbjct: 47 DKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSD-IETL--IESHKNDPKIKEEP 103
Query: 87 -YTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEM 145
Y++LI +Y + + A+ QM + ++ LL+ +++K + ++F+E+
Sbjct: 104 FYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEI 163
Query: 146 --RTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNG 203
R P+ ++ LIK Y D G + ++ ++++ + + T+L+ + G
Sbjct: 164 PQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKG 223
Query: 204 LDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYN 263
++ EM + G + +N I + + S ++ + + + M G+ PD +YN
Sbjct: 224 ELEVADNLWNEMVKKGCELDNAAYNVRIMSAQK-ESPERVKELIEEMSSMGLKPDTISYN 282
Query: 264 AVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNAL-AEEIYS 322
++ A G+ ++++KV +E C PN T+ +L+ + +E+ A+ + +Y
Sbjct: 283 YLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYM 342
Query: 323 GKITTHAVLLKTLV--LVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLV 380
KI L +V + N K D +A+ KK+ P + LNA L L
Sbjct: 343 HKIPDFNTLKHLVVGLVENKKRD---DAKGLIRTVKKKFPP---SFLNAWKKLEEELGLY 396
Query: 381 AKTN 384
+KT+
Sbjct: 397 SKTD 400
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/327 (18%), Positives = 132/327 (40%), Gaps = 38/327 (11%)
Query: 206 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAV 265
S++ + + K + E ++TLI +Y + F+ A +++M + G ++NA+
Sbjct: 84 SDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNAL 143
Query: 266 LAALARGGLWEQSEKVLSEMEN--GRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSG 323
L A +++ ++ E+ + P++++Y L+ +Y + EK + ++
Sbjct: 144 LNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGK 203
Query: 324 KITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKT 383
+ + T+ + SLY + +L
Sbjct: 204 GMEVTTIAFTTI----------------------------------LSSLYKKGELEVAD 229
Query: 384 NKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYA 443
N + M + G L YN + + R E+I E+ G++PD ISYN ++ A
Sbjct: 230 N-LWNEMVKKGCELDNAAYNVRIMSAQKESPERVKELI-EEMSSMGLKPDTISYNYLMTA 287
Query: 444 YCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPD 503
YC G + EAK++ ++ P+ T+ T + + ++ + + + + PD
Sbjct: 288 YCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPD 347
Query: 504 QNTYNSIVDWYCKLHLREEAYNFVHNL 530
NT +V + R++A + +
Sbjct: 348 FNTLKHLVVGLVENKKRDDAKGLIRTV 374
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 4/169 (2%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M +G D +N I + S E EL EE+ GL+PD ++YN L+ Y +
Sbjct: 234 EMVKKGCELDNAAYNVRIMSAQKESP-ERVKELIEEMSSMGLKPDTISYNYLMTAYCERG 292
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
EA +V + +E P+ T+ +LI L E+ + + V H PD T
Sbjct: 293 MLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLK 352
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAE 172
L+ G V KK + A + +RT K NA K+ + G++++
Sbjct: 353 HLVVGLVENKKRDDAKGL---IRTVKKKFPPSFLNAWKKLEEELGLYSK 398
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 83/217 (38%), Gaps = 36/217 (16%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
++ M+ +G+ F T++S E A L+ E+ G D YN + +
Sbjct: 196 IMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRI-MSA 254
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ P+ E++++M S G P ++Y L++AY G+L+E
Sbjct: 255 QKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDE------------------ 296
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
A +V+E + C PN TF LI ++ + +FK+
Sbjct: 297 -----------------AKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKS 339
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKR 217
PD T L+ +N + G+ + +K+
Sbjct: 340 VYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKK 376
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/312 (17%), Positives = 129/312 (41%), Gaps = 40/312 (12%)
Query: 157 FNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLL-AVFGQNGLDSEVSGVFKEM 215
++ LI+ YG MF + F+++ V++N LL A D +V +F E+
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFD-KVPQLFDEI 163
Query: 216 KRA--GFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGG 273
+ +P++ ++ LI +Y G+ ++A + ++M G+ + +L++L + G
Sbjct: 164 PQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKG 223
Query: 274 LWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLK 333
E ++ + +EM C+ + Y+ + + A + E++ L EE+ S
Sbjct: 224 ELEVADNLWNEMVKKGCELDNAAYNVRIMS-AQKESPERVKELIEEMSS----------- 271
Query: 334 TLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYES 393
G+ D + N +++ Y + ++ + K+ + + +
Sbjct: 272 ------------------------MGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGN 307
Query: 394 GFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEA 453
+ + +L++ +R + + I ++ + PD + ++ N K +A
Sbjct: 308 NCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDA 367
Query: 454 KRILNEMKDPAP 465
K ++ +K P
Sbjct: 368 KGLIRTVKKKFP 379
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 113/516 (21%), Positives = 213/516 (41%), Gaps = 81/516 (15%)
Query: 83 SIVTYTSLISAYVRDGLLEEALELKNQMVEKHIK--PDVYTYTTLLSGFVNAKKDELAMR 140
S+++Y +I YVR+GL +A+ + +MV + +K PD YTY + K +L +
Sbjct: 79 SLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLV 138
Query: 141 VFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFG 200
V + + + NAL+ MY + G VF +K + D+++WNT+++ +
Sbjct: 139 VHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMK----NRDVISWNTMISGYY 194
Query: 201 QNG------------------LDSE-------VSGVFKEM------------KRAGFVPE 223
+NG LD V G K++ KR G +
Sbjct: 195 RNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLG--DK 252
Query: 224 RETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLS 283
E N L++ Y +CG D+AR V+ RM D+ T+ ++ G E + ++
Sbjct: 253 IEVKNALVNMYLKCGRMDEARFVFDRMER----RDVITWTCMINGYTEDGDVENALELCR 308
Query: 284 EMENGRCKPNEVTYSSL---------------LHAYANGKEFE----------------K 312
M+ +PN VT +SL LH +A ++ K
Sbjct: 309 LMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCK 368
Query: 313 MNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLS 372
L ++SG H ++ + + +++A F ++ + +I TLN++L
Sbjct: 369 RVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLP 428
Query: 373 LYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEP 432
Y + + I ++ ++GF SL L++++S+ + I I EK
Sbjct: 429 AYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSK 488
Query: 433 DLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVV 492
D++ + +I Y +G A ++ EM P+ +T+ + + + + + E + +
Sbjct: 489 DVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLF 548
Query: 493 QCMIKQ-GCKPDQNTYNSIVDWYCKLHLREEAYNFV 527
+ M++ N Y IVD + +EAYN +
Sbjct: 549 RFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLI 584
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 133/286 (46%), Gaps = 12/286 (4%)
Query: 18 NTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMES 77
N + C R +EA +F+ ++ R D++T+ +++ Y + + A+E+ + M+
Sbjct: 261 NMYLKCGRM----DEARFVFDRME----RRDVITWTCMINGYTEDGDVENALELCRLMQF 312
Query: 78 RGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDEL 137
G P+ VT SL+S + + L V + + D+ T+L+S + K+ +L
Sbjct: 313 EGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDL 372
Query: 138 AMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLA 197
RVF + K + ++A+I + ++ +FK ++ P+I T N+LL
Sbjct: 373 CFRVF----SGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLP 428
Query: 198 VFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTP 257
+ + + + + GF+ + L+ YS+CG+ + A ++ + E +
Sbjct: 429 AYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSK 488
Query: 258 DLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
D+ + A+++ G + +V EM PNE+T++S L+A
Sbjct: 489 DVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNA 534
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 136/323 (42%), Gaps = 35/323 (10%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVL 72
D+ T+ +I+ E ALEL ++ G+RP+ VT +L+ V G + + + +
Sbjct: 283 DVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLH 342
Query: 73 KQMESRGFPPSIVTYTSLISAY-------------------------------VRDGLLE 101
+ I+ TSLIS Y V++ L+
Sbjct: 343 GWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVS 402
Query: 102 EALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALI 161
+AL L +M + ++P++ T +LL + AM + + G ++ L+
Sbjct: 403 DALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLV 462
Query: 162 KMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFV 221
+Y G K+F I+ S D+V W L++ +G +G VF EM R+G
Sbjct: 463 HVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVT 522
Query: 222 PERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLST-YNAVLAALARGGLWEQSEK 280
P TF + ++A S G ++ +++ MLE T S Y ++ L R G +++
Sbjct: 523 PNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYN 582
Query: 281 VLSEMENGRCKPNEVTYSSLLHA 303
+++ + +P + +LL A
Sbjct: 583 LITTIP---FEPTSTVWGALLAA 602
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 128/285 (44%), Gaps = 11/285 (3%)
Query: 17 FNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQME 76
++ +I+ C L +AL LF+ ++ + P++ T N+LL Y ++AM + +
Sbjct: 388 WSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLT 447
Query: 77 SRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDE 136
GF S+ T L+ Y + G LE A ++ N + EKH DV + L+SG+
Sbjct: 448 KTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGH 507
Query: 137 LAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFK-EIKACQCSPDIVTWNTL 195
A++VF EM +G PN TF + + G+ E +F+ ++ + + +
Sbjct: 508 NALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCI 567
Query: 196 LAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGV 255
+ + G+ G E + + F P + L++A + ++ E +
Sbjct: 568 VDLLGRAGRLDEAYNLITTIP---FEPTSTVWGALLAACVTHENVQLGEMAANKLFE--L 622
Query: 256 TPDLSTYNAVLAA--LARGGLWEQSEKVLSEMENG--RCKPNEVT 296
P+ +T N VL A A G W+ EKV S MEN R KP T
Sbjct: 623 EPE-NTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHST 666
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 115/287 (40%), Gaps = 14/287 (4%)
Query: 227 FNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM- 285
+TL Y+ CG AR +++ M ++ L +YN V+ R GL+ + V M
Sbjct: 52 LSTLSVTYALCGHITYARKLFEEMPQS----SLLSYNIVIRMYVREGLYHDAISVFIRMV 107
Query: 286 -ENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDF 344
E +C P+ TY + A K + + I + L+ + F
Sbjct: 108 SEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGK 167
Query: 345 LAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNS 404
+ A F K R D+ + N M+S Y R + + +M L S
Sbjct: 168 VEMARDVFDVMKNR----DVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVS 223
Query: 405 LMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPA 464
++ + ++ + + + EK + + N ++ Y + G+M EA+ + + M+
Sbjct: 224 MLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMER-- 281
Query: 465 PVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
DV+T+ + Y + A+ + + M +G +P+ T S+V
Sbjct: 282 --RDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLV 326
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 189/411 (45%), Gaps = 49/411 (11%)
Query: 139 MRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAV 198
+++FE M+ G K ++ T+++ IK G + + + ++++ I ++ N++L+
Sbjct: 118 IQLFEWMQQHG-KISVSTYSSCIKFVGAKNVSKAL-EIYQSIPDESTKINVYICNSILSC 175
Query: 199 FGQNG-LDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC-GSFDQARAVYKRMLEAGVT 256
+NG LDS + +F +MKR G P+ T+NTL++ + + +A + + G+
Sbjct: 176 LVKNGKLDSCIK-LFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQ 234
Query: 257 PDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNAL 316
D Y VLA A G E++E + +M+ PN YSSLL++Y+ +++K + L
Sbjct: 235 MDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADEL 294
Query: 317 AEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGR 376
E+ S + + V++ TL L +Y +
Sbjct: 295 MTEMKSIGLVPNKVMMTTL-----------------------------------LKVYIK 319
Query: 377 KKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLIS 436
L ++ ++L + +G+ + Y LM S+ ++ I ++ KG+ D +
Sbjct: 320 GGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYA 379
Query: 437 YNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMI 496
+I+I A CR+ + EAK + + + D+V NT + Y + +++ M
Sbjct: 380 NSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMD 439
Query: 497 KQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEKGRLLE 547
+Q PD NT++ ++ ++ K L AY ++LD+H KG LE
Sbjct: 440 EQAVSPDYNTFHILIKYFIKEKLHLLAYQ-----TTLDMH----SKGHRLE 481
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 157/321 (48%), Gaps = 9/321 (2%)
Query: 32 EALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLI 91
+ALE+++ I + ++ N++L K+ + +++ QM+ G P +VTY +L+
Sbjct: 149 KALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLL 208
Query: 92 SA--YVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAG 149
+ V++G +A+EL ++ I+ D Y T+L+ + + E A ++M+ G
Sbjct: 209 AGCIKVKNGY-PKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEG 267
Query: 150 CKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVS 209
PNI +++L+ Y +G + + ++ E+K+ P+ V TLL V+ + GL
Sbjct: 268 HSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSR 327
Query: 210 GVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAAL 269
+ E++ AG+ + L+ S+ G ++AR+++ M GV D + +++AL
Sbjct: 328 ELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISAL 387
Query: 270 ARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEK----MNALAEEIYSGKI 325
R +++++++ + E K + V +++L AY E E M + E+ S
Sbjct: 388 CRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDY 447
Query: 326 TTHAVLLKTLVLVNSKFDFLA 346
T +L+K + K LA
Sbjct: 448 NTFHILIK--YFIKEKLHLLA 466
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 176/385 (45%), Gaps = 3/385 (0%)
Query: 30 YEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTS 89
+++ ++LFE ++ G + + TY++ + G ++ +A+E+ + + ++ S
Sbjct: 114 WQDLIQLFEWMQQHG-KISVSTYSSCIKFVG-AKNVSKALEIYQSIPDESTKINVYICNS 171
Query: 90 LISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKD-ELAMRVFEEMRTA 148
++S V++G L+ ++L +QM +KPDV TY TLL+G + K A+ + E+
Sbjct: 172 ILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHN 231
Query: 149 GCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEV 208
G + + + ++ + G E +++K SP+I +++LL + G +
Sbjct: 232 GIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKA 291
Query: 209 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAA 268
+ EMK G VP + TL+ Y + G FD++R + + AG + Y ++
Sbjct: 292 DELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDG 351
Query: 269 LARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTH 328
L++ G E++ + +M+ + + S ++ A K F++ L+ + +
Sbjct: 352 LSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCD 411
Query: 329 AVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILK 388
V+L T++ + + + ++ + D T + ++ + ++KL +
Sbjct: 412 LVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTL 471
Query: 389 FMYESGFTLSLPGYNSLMYLHSRTR 413
M+ G L +SL+Y + R
Sbjct: 472 DMHSKGHRLEEELCSSLIYHLGKIR 496
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 147/303 (48%), Gaps = 9/303 (2%)
Query: 18 NTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLD--VYGKSRRPKEAMEVLKQM 75
N+++SC + ++LF+++K GL+PD+VTYN LL + K+ PK A+E++ ++
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPK-AIELIGEL 228
Query: 76 ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQM-VEKHIKPDVYTYTTLLSGFVNAKK 134
G V Y ++++ +G EEA QM VE H P++Y Y++LL+ +
Sbjct: 229 PHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGH-SPNIYHYSSLLNSYSWKGD 287
Query: 135 DELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNT 194
+ A + EM++ G PN L+K+Y G+F ++ E+++ + + + +
Sbjct: 288 YKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCM 347
Query: 195 LLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAG 254
L+ + G E +F +MK G + + +ISA R F +A+ + +
Sbjct: 348 LMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTY 407
Query: 255 VTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMN 314
DL N +L A R G E +++ +M+ P+ T+ L+ + EK++
Sbjct: 408 EKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIK----EKLH 463
Query: 315 ALA 317
LA
Sbjct: 464 LLA 466
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 129/263 (49%), Gaps = 1/263 (0%)
Query: 5 MKSQGLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
MK GL PD+ T+NTL++ C + + Y +A+EL E+ G++ D V Y +L + +
Sbjct: 192 MKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNG 251
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
R +EA ++QM+ G P+I Y+SL+++Y G ++A EL +M + P+ T
Sbjct: 252 RSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMT 311
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
TLL ++ + + + E+ +AG N + L+ G E +F ++K
Sbjct: 312 TLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGK 371
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
D + +++ ++ E + ++ + + NT++ AY R G +
Sbjct: 372 GVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESV 431
Query: 244 RAVYKRMLEAGVTPDLSTYNAVL 266
+ K+M E V+PD +T++ ++
Sbjct: 432 MRMMKKMDEQAVSPDYNTFHILI 454
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 114/234 (48%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
++ ++ G+ D + T+++ C + EEA +++K+ G P++ Y++LL+ Y
Sbjct: 224 LIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYS 283
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K+A E++ +M+S G P+ V T+L+ Y++ GL + + EL +++ +
Sbjct: 284 WKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEM 343
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
Y L+ G A K E A +F++M+ G + + + +I F E ++ ++
Sbjct: 344 PYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDS 403
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAY 234
+ D+V NT+L + + G V + K+M P+ TF+ LI +
Sbjct: 404 ETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYF 457
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 131/283 (46%)
Query: 2 LMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGK 61
+ MK +G +P++ +++L++ Y++A EL E+K GL P+ V LL VY K
Sbjct: 260 IQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIK 319
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYT 121
+ E+L ++ES G+ + + Y L+ + G LEEA + + M K ++ D Y
Sbjct: 320 GGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYA 379
Query: 122 YTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK 181
+ ++S +K+ + A + + T K ++ N ++ Y G + ++ K++
Sbjct: 380 NSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMD 439
Query: 182 ACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFD 241
SPD T++ L+ F + L +M G E E ++LI + +
Sbjct: 440 EQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRAQA 499
Query: 242 QARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSE 284
+A +VY + + T + +L L +G L + + V+ +
Sbjct: 500 EAFSVYNMLRYSKRTICKELHEKILHILIQGNLLKDAYIVVKD 542
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 74/149 (49%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +++S G A + + L+ EEA +F+++K G+R D + ++
Sbjct: 329 LLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALC 388
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+S+R KEA E+ + E+ +V +++ AY R G +E + + +M E+ + PD
Sbjct: 389 RSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYN 448
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAG 149
T+ L+ F+ K LA + +M + G
Sbjct: 449 TFHILIKYFIKEKLHLLAYQTTLDMHSKG 477
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 123/253 (48%), Gaps = 7/253 (2%)
Query: 31 EEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSL 90
++A ELF+ +L G+ P+ +YN L+ + + A ++ +M R P + +Y L
Sbjct: 172 QKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKIL 231
Query: 91 ISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
I + R G + A+EL + M+ K PD +YTTLL+ + A ++ M+ GC
Sbjct: 232 IQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGC 291
Query: 151 KPNICTFNALIKMYG--DRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEV 208
P++ +N +I + DR M A KV ++ + CSP+ V++ TL+ G+ E
Sbjct: 292 NPDLVHYNTMILGFCREDRAMDAR--KVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEG 349
Query: 209 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAA 268
+EM GF P N L+ + G ++A V + +++ G T T+ V+
Sbjct: 350 KKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPL 409
Query: 269 LARGGLWEQSEKV 281
+ ++SEK+
Sbjct: 410 ICN---EDESEKI 419
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 137/312 (43%), Gaps = 3/312 (0%)
Query: 17 FNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR-RPKEAMEVLKQM 75
F LI L E+ L F ++ P N +LDV R ++A E+ K
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 76 ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKD 135
G P+ +Y L+ A+ + L A +L +M+E+ + PDV +Y L+ GF +
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 136 ELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTL 195
AM + ++M G P+ ++ L+ + E K+ +K C+PD+V +NT+
Sbjct: 242 NGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTM 301
Query: 196 LAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGV 255
+ F + + V +M G P ++ TLI G FD+ + + M+ G
Sbjct: 302 ILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGF 361
Query: 256 TPDLSTYNAVLAALARGGLWEQSEKVLS-EMENGRCKPNEVTYSSLLHAYANGKEFEKMN 314
+P S N ++ G E++ V+ M+NG ++ T+ ++ N E EK+
Sbjct: 362 SPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSD-TWEMVIPLICNEDESEKIK 420
Query: 315 ALAEEIYSGKIT 326
E+ +IT
Sbjct: 421 LFLEDAVKEEIT 432
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 126/280 (45%), Gaps = 1/280 (0%)
Query: 70 EVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGF 129
+VL + S G+P + +T LI Y L E+ L +M+E + P +L
Sbjct: 105 DVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVL 164
Query: 130 VNAKKD-ELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPD 188
V+ + + A +F+ R G PN ++N L++ + + ++F ++ PD
Sbjct: 165 VSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPD 224
Query: 189 IVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYK 248
+ ++ L+ F + G + + +M GFVP+R ++ TL+++ R +A +
Sbjct: 225 VDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLC 284
Query: 249 RMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGK 308
RM G PDL YN ++ R + KVL +M + C PN V+Y +L+ +
Sbjct: 285 RMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQG 344
Query: 309 EFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEA 348
F++ EE+ S + H + LV F + EA
Sbjct: 345 MFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEA 384
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 109/224 (48%)
Query: 8 QGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKE 67
G+ P+ ++N L+ A +LF ++ + PD+ +Y L+ + + +
Sbjct: 184 HGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNG 243
Query: 68 AMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLS 127
AME+L M ++GF P ++YT+L+++ R L EA +L +M K PD+ Y T++
Sbjct: 244 AMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMIL 303
Query: 128 GFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSP 187
GF + A +V ++M + GC PN ++ LI D+GMF E K +E+ + SP
Sbjct: 304 GFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSP 363
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLI 231
N L+ F G E V + + + G +T+ +I
Sbjct: 364 HFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVI 407
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 132/322 (40%), Gaps = 38/322 (11%)
Query: 208 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLA 267
+ V + + +G+ E F LI Y+ ++ + + +MLE TP N +L
Sbjct: 103 IDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILD 162
Query: 268 ALA--RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKI 325
L RG L + E S +G PN +Y+ L+ A+ +N
Sbjct: 163 VLVSHRGYLQKAFELFKSSRLHG-VMPNTRSYNLLMQAFC-------LN----------- 203
Query: 326 TTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNK 385
D L+ A F + +R + D+ + ++ + RK V +
Sbjct: 204 -----------------DDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAME 246
Query: 386 ILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYC 445
+L M GF Y +L+ R R++ +L + KG PDL+ YN +I +C
Sbjct: 247 LLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFC 306
Query: 446 RNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQN 505
R + +A+++L++M P+ V+Y T + MF E ++ MI +G P +
Sbjct: 307 REDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFS 366
Query: 506 TYNSIVDWYCKLHLREEAYNFV 527
N +V +C EEA + V
Sbjct: 367 VSNCLVKGFCSFGKVEEACDVV 388
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 75/150 (50%), Gaps = 2/150 (1%)
Query: 1 MLMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+L DM ++G PD ++ TL+ S CR L EA +L +KL G PD+V YN ++ +
Sbjct: 247 LLDDMLNKGFVPDRLSYTTLLNSLCRKTQL-REAYKLLCRMKLKGCNPDLVHYNTMILGF 305
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
+ R +A +VL M S G P+ V+Y +LI G+ +E + +M+ K P
Sbjct: 306 CREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHF 365
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAG 149
L+ GF + K E A V E + G
Sbjct: 366 SVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 119/274 (43%), Gaps = 1/274 (0%)
Query: 260 STYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEE 319
S++ ++ L RG + + VL++ + ++ L+ YA K EK+ + +
Sbjct: 85 SSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYK 144
Query: 320 IYSGKITTHAVLL-KTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKK 378
+ T L + L ++ S +L +A F + G+ + + N ++ +
Sbjct: 145 MLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLND 204
Query: 379 LVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYN 438
++ ++ M E + Y L+ R + +L ++L KG PD +SY
Sbjct: 205 DLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYT 264
Query: 439 IVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQ 498
++ + CR ++ EA ++L MK PD+V YNT + + +A V+ M+
Sbjct: 265 TLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSN 324
Query: 499 GCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSS 532
GC P+ +Y +++ C + +E ++ + S
Sbjct: 325 GCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMIS 358
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 174/376 (46%), Gaps = 52/376 (13%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEI-KLAGLRPDMVTYNALLDVYGKSRRPKEAME 70
P+L ++N++IS C E+A+ ++ + +++ RPD T++A + + R
Sbjct: 364 PNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKL 423
Query: 71 VLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFV 130
+ Q+ G+ S+ T+L+S Y ++ E A ++ + M E+ DV +T ++ G
Sbjct: 424 LHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKER----DVVLWTEMIVGHS 479
Query: 131 NAKKDELAMRVFEEM-----RTAG--------------------------------CKPN 153
ELA++ F EM R+ G C +
Sbjct: 480 RLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMS 539
Query: 154 ICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFK 213
+C AL+ MYG G + +F + +PD+ WN++L + Q+G+ + F+
Sbjct: 540 VC--GALVDMYGKNGKYETAETIF----SLASNPDLKCWNSMLGAYSQHGMVEKALSFFE 593
Query: 214 EMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGG 273
++ GF+P+ T+ +L++A S GS Q + ++ +M E G+ Y+ ++ +++ G
Sbjct: 594 QILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAG 653
Query: 274 LWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEI--YSGKITTHAVL 331
L +++ +++ + G + + +LL A N + + AE+I + T +L
Sbjct: 654 LVDEALELIEQSPPGNNQAE--LWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHIL 711
Query: 332 LKTLVLVNSKFDFLAE 347
L L VN +++ +AE
Sbjct: 712 LSNLYAVNGRWEDVAE 727
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 92/486 (18%), Positives = 201/486 (41%), Gaps = 23/486 (4%)
Query: 12 PDLCTFNTLISCCRAGSLYEEAL---ELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEA 68
P+ TF +L+ C ++ E+ L L +I G ++V ++L +Y + A
Sbjct: 197 PNSSTFTSLVQVC---AVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESA 253
Query: 69 MEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSG 128
+ + +R V + ++I +++ +E+ L M+ + P +TY+ +L+G
Sbjct: 254 RRIFDCVNNR----DAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNG 309
Query: 129 FVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPD 188
L + + + ++ NAL+ MY G E VF I +P+
Sbjct: 310 CSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIH----NPN 365
Query: 189 IVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFV-PERETFNTLISAYSRCGSFDQARAVY 247
+V+WN++++ +NG + +++ + R P+ TF+ ISA + F + ++
Sbjct: 366 LVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLH 425
Query: 248 KRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG 307
++ + G + +L+ + E ++KV M+ + + V ++ ++ ++
Sbjct: 426 GQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMK----ERDVVLWTEMIVGHSRL 481
Query: 308 KEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTL 367
E E+Y K + L +++ S L + E + G ++
Sbjct: 482 GNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVC 541
Query: 368 NAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILE 427
A++ +YG+ I L +NS++ +S+ K+ +ILE
Sbjct: 542 GALVDMYGKNGKYETAETIFSLASNP----DLKCWNSMLGAYSQHGMVEKALSFFEQILE 597
Query: 428 KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGE 487
G PD ++Y ++ A G + K + N+MK+ Y+ V + + E
Sbjct: 598 NGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDE 657
Query: 488 AIGVVQ 493
A+ +++
Sbjct: 658 ALELIE 663
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 101/502 (20%), Positives = 208/502 (41%), Gaps = 69/502 (13%)
Query: 53 NALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRD-GLLEEALELKNQMV 111
N L+ +Y + ++A +V +M R ++V+Y +L SAY R+ A L M
Sbjct: 136 NNLISMYVRCGSLEQARKVFDKMPHR----NVVSYNALYSAYSRNPDFASYAFPLTTHMA 191
Query: 112 EKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFA 171
+++KP+ T+T+L+ + + + ++ G N+ +++ MY G
Sbjct: 192 FEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLE 251
Query: 172 EMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLI 231
++F C + D V WNT++ +N + F+ M +G P + T++ ++
Sbjct: 252 SARRIFD----CVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVL 307
Query: 232 SAYSRCGSFDQARAVYKRMLEAGV-------------------------------TPDLS 260
+ S+ GS+ + ++ R++ + P+L
Sbjct: 308 NGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLV 367
Query: 261 TYNAVLAALARGGLWEQSE---KVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALA 317
++N++++ + G EQ+ + L M R P+E T+S+ + A A + F L
Sbjct: 368 SWNSIISGCSENGFGEQAMLMYRRLLRMSTPR--PDEYTFSAAISATAEPERFVHGKLLH 425
Query: 318 EEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRK 377
++ + TL+ + K A+ F K+R D+ M+ + R
Sbjct: 426 GQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKER----DVVLWTEMIVGHSR- 480
Query: 378 KLVAKTNKILKFMYE--------SGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKG 429
+ + ++F E GF+LS S++ S R+ E+ + G
Sbjct: 481 --LGNSELAVQFFIEMYREKNRSDGFSLS-----SVIGACSDMAMLRQGEVFHCLAIRTG 533
Query: 430 IEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAI 489
+ + ++ Y +NGK A+ I + A PD+ +N+ + Y+ + M +A+
Sbjct: 534 FDCVMSVCGALVDMYGKNGKYETAETIFS----LASNPDLKCWNSMLGAYSQHGMVEKAL 589
Query: 490 GVVQCMIKQGCKPDQNTYNSIV 511
+ +++ G PD TY S++
Sbjct: 590 SFFEQILENGFMPDAVTYLSLL 611
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 99/475 (20%), Positives = 196/475 (41%), Gaps = 36/475 (7%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M G+ P T++ +++ C Y + I ++ D+ NALLD+Y
Sbjct: 290 NMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCG 349
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHI-KPDVYTY 122
+EA V ++ + P++V++ S+IS +G E+A+ + +++ +PD YT+
Sbjct: 350 DMREAFYVFGRIHN----PNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTF 405
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
+ +S ++ + ++ G + ++ L+ MY KVF +K
Sbjct: 406 SAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMK- 464
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
D+V W ++ + G F EM R + + +++I A S Q
Sbjct: 465 ---ERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQ 521
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
+ + G +S A++ + G +E +E + S N P+ ++S+L
Sbjct: 522 GEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASN----PDLKCWNSMLG 577
Query: 303 AYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPH 362
AY+ EK + E+I AV +L+ S + + + + K++GI
Sbjct: 578 AYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKA 637
Query: 363 DITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYN------SLMYLHSRTRNFR 416
+ M++L + LV + ++++ S PG N +L+ TRN +
Sbjct: 638 GFKHYSCMVNLVSKAGLVDEALELIE--------QSPPGNNQAELWRTLLSACVNTRNLQ 689
Query: 417 KSEMILREILEKGIEPDLISYNIVIY-AYCRNGK------MTEAKRILNEMKDPA 464
+IL+ ++P+ + +I++ Y NG+ M R L KDP
Sbjct: 690 IGLYAAEQILK--LDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPG 742
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 152/329 (46%), Gaps = 45/329 (13%)
Query: 9 GLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEA 68
GL+ L N L+S EA + +E+ R D+V++N+L+ Y +++R +A
Sbjct: 170 GLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS----RRDVVSWNSLVVGYAQNQRFDDA 225
Query: 69 MEVLKQMESRGFP---------------------------------PSIVTYTSLISAYV 95
+EV ++MES S+V++ +I Y+
Sbjct: 226 LEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYM 285
Query: 96 RDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNIC 155
++ + EA+EL ++M +PD + T++L + L ++ + PN+
Sbjct: 286 KNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL 345
Query: 156 TFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEM 215
NALI MY G + VF+ +K S D+V+W +++ +G +G + +F ++
Sbjct: 346 LENALIDMYAKCGCLEKARDVFENMK----SRDVVSWTAMISAYGFSGRGCDAVALFSKL 401
Query: 216 KRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEA-GVTPDLSTYNAVLAALARGGL 274
+ +G VP+ F T ++A S G ++ R+ +K M + +TP L ++ L R G
Sbjct: 402 QDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGK 461
Query: 275 WEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
+++ + + +M +PNE + +LL A
Sbjct: 462 VKEAYRFIQDMS---MEPNERVWGALLGA 487
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/422 (20%), Positives = 169/422 (40%), Gaps = 15/422 (3%)
Query: 40 IKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGL 99
I L LR + L+ Y + A +V ++ R +++ +I +YV +G
Sbjct: 65 IILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPER----NVIIINVMIRSYVNNGF 120
Query: 100 LEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNA 159
E +++ M +++PD YT+ +L + + ++ G + N
Sbjct: 121 YGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNG 180
Query: 160 LIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAG 219
L+ MYG G +E V E+ D+V+WN+L+ + QN + V +EM+
Sbjct: 181 LVSMYGKCGFLSEARLVLDEMS----RRDVVSWNSLVVGYAQNQRFDDALEVCREMESVK 236
Query: 220 FVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSE 279
+ T +L+ A S + + V + G L ++N ++ + + ++
Sbjct: 237 ISHDAGTMASLLPAVSNTTT-ENVMYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVEAV 294
Query: 280 KVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVN 339
++ S ME +P+ V+ +S+L A + + I K+ + +L L+ +
Sbjct: 295 ELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMY 354
Query: 340 SKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSL 399
+K L +A F K R D+ + AM+S YG + + +SG
Sbjct: 355 AKCGCLEKARDVFENMKSR----DVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDS 410
Query: 400 PGYNSLMYLHSRTRNFRKSEMILREILEK-GIEPDLISYNIVIYAYCRNGKMTEAKRILN 458
+ + + S + + + + I P L ++ R GK+ EA R +
Sbjct: 411 IAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQ 470
Query: 459 EM 460
+M
Sbjct: 471 DM 472
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 117/261 (44%), Gaps = 11/261 (4%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M++ G PD + +++ C S ++ I+ L P+++ NAL+D+Y K
Sbjct: 300 MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGC 359
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
++A +V + M+SR +V++T++ISAY G +A+ L +++ + + PD + T
Sbjct: 360 LEKARDVFENMKSR----DVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVT 415
Query: 125 LLSGFVNAKKDELAMRVFEEMRTA-GCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
L+ +A E F+ M P + ++ + G G E ++ I+
Sbjct: 416 TLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKE---AYRFIQDM 472
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLIS-AYSRCGSFDQ 242
P+ W LL + D+++ G+ K PE+ + L+S Y++ G +++
Sbjct: 473 SMEPNERVWGALLGACRVHS-DTDI-GLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEE 530
Query: 243 ARAVYKRMLEAGVTPDLSTYN 263
+ M G+ + N
Sbjct: 531 VTNIRNIMKSKGLKKNPGASN 551
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 132/315 (41%), Gaps = 28/315 (8%)
Query: 230 LISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGR 289
L+ AY+ AR V+ + E V N ++ + G + + KV M
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVI----IINVMIRSYVNNGFYGEGVKVFGTMCGCN 135
Query: 290 CKPNEVTYSSLLHAYANGKEF---EKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLA 346
+P+ T+ +L A + K++ A ++ +++ + LV + K FL+
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKV---GLSSTLFVGNGLVSMYGKCGFLS 192
Query: 347 EAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKL------VAKTNKILKFMYESGFTLSLP 400
EA E +R D+ + N+++ Y + + V + + +K +++G SL
Sbjct: 193 EARLVLDEMSRR----DVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASL- 247
Query: 401 GYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEM 460
L + + ++ M ++++ K + L+S+N++I Y +N EA + + M
Sbjct: 248 -------LPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRM 300
Query: 461 KDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLR 520
+ PD V+ + + S + + ++ P+ N+++D Y K
Sbjct: 301 EADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCL 360
Query: 521 EEAYNFVHNLSSLDL 535
E+A + N+ S D+
Sbjct: 361 EKARDVFENMKSRDV 375
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/472 (22%), Positives = 195/472 (41%), Gaps = 23/472 (4%)
Query: 47 PDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALEL 106
P++ YN+LL G R EA ++LK ME G P+IVTY +L+ Y+ +G +AL +
Sbjct: 185 PNLFIYNSLL---GAMRGFGEAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGI 241
Query: 107 KNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGD 166
+ EK +P+ TY+T L + + A+ F E+R K I Y
Sbjct: 242 LDLTKEKGFEPNPITYSTALLVYRRMEDGMGALEFFVELREKYAKREIGNDVG----YDW 297
Query: 167 RGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERET 226
F ++ I C + W + + + V + M AG P RE
Sbjct: 298 EFEFVKLENFIGRI----CYQVMRRW-----LVKDDNWTTRVLKLLNAMDSAGVRPSREE 348
Query: 227 FNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEME 286
LI A +R + + +YKR+ E LS N ++ + + W + ++ ++
Sbjct: 349 HERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLL 408
Query: 287 NGRCKPNEVTY-------SSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVN 339
+ +PN ++Y + LL A + + L ++ + +++
Sbjct: 409 DEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVAC 468
Query: 340 SKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSL 399
SK A F G + + A+LS + KL + ++ M + G +L
Sbjct: 469 SKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNL 528
Query: 400 PGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNE 459
Y ++ + + + F + +L+E+ KGIEP ++++N VI RNG A +
Sbjct: 529 YAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHR 588
Query: 460 MKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
MK P+ +TY + A ++ A + +G K Y+++V
Sbjct: 589 MKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVV 640
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 186/421 (44%), Gaps = 68/421 (16%)
Query: 10 LAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAM 69
+ P+L +N+L+ R + EA ++ ++++ G+ P++VTYN L+ +Y + +A+
Sbjct: 183 IGPNLFIYNSLLGAMRG---FGEAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKAL 239
Query: 70 EVLKQMESRGFPPSIVTYTSLISAYVR--DGL--LEEALELKNQMVEKHIKPDV-YTYT- 123
+L + +GF P+ +TY++ + Y R DG+ LE +EL+ + ++ I DV Y +
Sbjct: 240 GILDLTKEKGFEPNPITYSTALLVYRRMEDGMGALEFFVELREKYAKREIGNDVGYDWEF 299
Query: 124 --TLLSGFVN-----------AKKDELAMRVFE---EMRTAGCKPNICTFNALI------ 161
L F+ K D RV + M +AG +P+ LI
Sbjct: 300 EFVKLENFIGRICYQVMRRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTRE 359
Query: 162 -------KMYGD-RGMFAE------------MGKVFKEIKACQCSPDIVT---------- 191
++Y R F+E MGK K A + D++
Sbjct: 360 EHYIVGKELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSY 419
Query: 192 ------WNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
+N LL+ + G+ + +M+ G P+R +N ++ A S+ A
Sbjct: 420 ELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQ 479
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA 305
++K M++ G P + +Y A+L+AL +G L++++ +V + M +PN Y+++
Sbjct: 480 IFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLT 539
Query: 306 NGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI-PHDI 364
++F ++ L +E+ S I V ++ ++ A F K + P++I
Sbjct: 540 GQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEI 599
Query: 365 T 365
T
Sbjct: 600 T 600
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 103/207 (49%), Gaps = 7/207 (3%)
Query: 4 DMKSQGLAPD-------LCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALL 56
D+ +G P+ + FN L+S ++ + L +++ GL+P +NA+L
Sbjct: 406 DLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVL 465
Query: 57 DVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIK 116
K+ A+++ K M G P++++Y +L+SA + L +EA + N M++ I+
Sbjct: 466 VACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIE 525
Query: 117 PDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKV 176
P++Y YTT+ S +K L + +EM + G +P++ TFNA+I G+ +
Sbjct: 526 PNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEW 585
Query: 177 FKEIKACQCSPDIVTWNTLLAVFGQNG 203
F +K+ P+ +T+ L+ +
Sbjct: 586 FHRMKSENVEPNEITYEMLIEALANDA 612
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 127/281 (45%), Gaps = 15/281 (5%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L M S G+ P LI C Y EL++ I+ + N L+ + G
Sbjct: 333 LLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNHLIWLMG 392
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTY-------TSLISAYVRDGLLEEALELKNQMVEK 113
K+++ A+E+ + + G P+ ++Y L+SA + G+ + L N+M +K
Sbjct: 393 KAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDK 452
Query: 114 HIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEM 173
+KP + +L A + A+++F+ M G KP + ++ AL+ ++ E
Sbjct: 453 GLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEA 512
Query: 174 GKVFKEIKACQCSPDIVTWNTLLAVF-GQ---NGLDSEVSGVFKEMKRAGFVPERETFNT 229
+V+ + P++ + T+ +V GQ N LD+ + KEM G P TFN
Sbjct: 513 FRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDT----LLKEMASKGIEPSVVTFNA 568
Query: 230 LISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALA 270
+IS +R G A + RM V P+ TY ++ ALA
Sbjct: 569 VISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALA 609
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 112/262 (42%), Gaps = 7/262 (2%)
Query: 14 LCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTY-------NALLDVYGKSRRPK 66
L N LI + ALE++E++ G P+ ++Y N LL K +
Sbjct: 381 LSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWR 440
Query: 67 EAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLL 126
+ +L +ME +G P + +++ A + A+++ MV+ KP V +Y LL
Sbjct: 441 WGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALL 500
Query: 127 SGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCS 186
S K + A RV+ M G +PN+ + + + + F + + KE+ +
Sbjct: 501 SALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIE 560
Query: 187 PDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAV 246
P +VT+N +++ +NGL F MK P T+ LI A + A +
Sbjct: 561 PSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYEL 620
Query: 247 YKRMLEAGVTPDLSTYNAVLAA 268
+ + G+ Y+AV+ +
Sbjct: 621 HVKAQNEGLKLSSKPYDAVVKS 642
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/470 (21%), Positives = 193/470 (41%), Gaps = 48/470 (10%)
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCK------PNICTFNALIKMYGDRGMFAEMG 174
+ ++ GF K+ + A+ V + ++ + PN+ +N+L+ G F E
Sbjct: 148 VFCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLL---GAMRGFGEAE 204
Query: 175 KVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAY 234
K+ K+++ P+IVT+NTL+ ++ + G + G+ K GF P T++T + Y
Sbjct: 205 KILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTALLVY 264
Query: 235 SRCGS-------FDQARAVY-KRMLEAGVTPDLS-------------TYNAVLAALARGG 273
R F + R Y KR + V D Y + L +
Sbjct: 265 RRMEDGMGALEFFVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVMRRWLVKDD 324
Query: 274 LWE-QSEKVLSEMENGRCKPNEVTYSSLLHA------YANGKE-FEKMNALAEEIYSGKI 325
W + K+L+ M++ +P+ + L+ A Y GKE ++++ EI S +
Sbjct: 325 NWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEI-SLSV 383
Query: 326 TTHAVLL-----KTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLV 380
H + L K + D L E E ++ N +LS ++ +
Sbjct: 384 CNHLIWLMGKAKKWWAALEIYEDLLDEGP----EPNNLSYELVVSHFNILLSAASKRGIW 439
Query: 381 AKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIV 440
++L M + G +N+++ S+ + I + +++ G +P +ISY +
Sbjct: 440 RWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGAL 499
Query: 441 IYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGC 500
+ A + EA R+ N M P++ Y T + F +++ M +G
Sbjct: 500 LSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGI 559
Query: 501 KPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEKGRLLERIA 550
+P T+N+++ + L AY + H + S ++ +E L+E +A
Sbjct: 560 EPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALA 609
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 81/158 (51%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M G P + ++ L+S G LY+EA ++ + G+ P++ Y + V ++
Sbjct: 484 MVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQK 543
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+LK+M S+G PS+VT+ ++IS R+GL A E ++M ++++P+ TY
Sbjct: 544 FNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEM 603
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIK 162
L+ N K LA + + + G K + ++A++K
Sbjct: 604 LIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVVK 641
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 48/93 (51%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+L +M S+G+ P + TFN +IS C L A E F +K + P+ +TY L++
Sbjct: 550 LLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALA 609
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISA 93
+P+ A E+ + ++ G S Y +++ +
Sbjct: 610 NDAKPRLAYELHVKAQNEGLKLSSKPYDAVVKS 642
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 124/244 (50%), Gaps = 1/244 (0%)
Query: 94 YVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEM-RTAGCKP 152
Y G+ E A +L ++M E + + V ++ LLS +VN+KK + AM+ F+E+ G P
Sbjct: 132 YGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITP 191
Query: 153 NICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVF 212
++ T+N +IK +G ++ +F+E++ PD++++NTLL F + L E ++
Sbjct: 192 DLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIW 251
Query: 213 KEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARG 272
MK P ++N+ + +R F A + M G++PD+ TYNA++ A
Sbjct: 252 DLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVD 311
Query: 273 GLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLL 332
E+ K +EM+ P+ VTY L+ + ++ ++EE K+ + +
Sbjct: 312 NNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMY 371
Query: 333 KTLV 336
K +V
Sbjct: 372 KPVV 375
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 120/228 (52%), Gaps = 1/228 (0%)
Query: 58 VYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEK-HIK 116
+YG S + A ++ +M ++ ++ +L+SAYV L+EA++ ++ EK I
Sbjct: 131 LYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGIT 190
Query: 117 PDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKV 176
PD+ TY T++ + + +FEE+ G +P++ +FN L++ + R +F E ++
Sbjct: 191 PDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRI 250
Query: 177 FKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 236
+ +K+ SP+I ++N+ + +N ++ + MK G P+ T+N LI+AY
Sbjct: 251 WDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRV 310
Query: 237 CGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSE 284
+ ++ Y M E G+TPD TY ++ L + G +++ +V E
Sbjct: 311 DNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEE 358
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 131/264 (49%), Gaps = 4/264 (1%)
Query: 29 LYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQM-ESRGFPPSIVTY 87
+ E A +LF+E+ + ++NALL Y S++ EAM+ K++ E G P +VTY
Sbjct: 137 MAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTY 196
Query: 88 TSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRT 147
++I A R G +++ L + ++ + +PD+ ++ TLL F + R+++ M++
Sbjct: 197 NTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKS 256
Query: 148 AGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSE 207
PNI ++N+ ++ F + + +K SPD+ T+N L+ + + E
Sbjct: 257 KNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEE 316
Query: 208 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLA 267
V + EMK G P+ T+ LI + G D+A V + ++ + + Y V+
Sbjct: 317 VMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVE 376
Query: 268 ALARGGLWEQSEKVLSEMENGRCK 291
L G +++ +++ +NG+ +
Sbjct: 377 RLMGAGKIDEATQLV---KNGKLQ 397
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 118/235 (50%), Gaps = 3/235 (1%)
Query: 16 TFNTLISCCRAGSLYEEALELFEEI-KLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQ 74
+FN L+S +EA++ F+E+ + G+ PD+VTYN ++ + + + + ++
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 75 MESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKK 134
+E GF P ++++ +L+ + R L E + + M K++ P++ +Y + + G KK
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 135 DELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNT 194
A+ + + M+T G P++ T+NALI Y E+ K + E+K +PD VT+
Sbjct: 279 FTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCM 338
Query: 195 LLAVFGQNG-LDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYK 248
L+ + + G LD V V +E + + + ++ G D+A + K
Sbjct: 339 LIPLLCKKGDLDRAVE-VSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVK 392
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 89/161 (55%), Gaps = 2/161 (1%)
Query: 9 GLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKE 67
G+ PDL T+NT+I + CR GS+ ++ L +FEE++ G PD++++N LL+ + + E
Sbjct: 188 GITPDLVTYNTMIKALCRKGSM-DDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVE 246
Query: 68 AMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLS 127
+ M+S+ P+I +Y S + R+ +AL L + M + I PDV+TY L++
Sbjct: 247 GDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALIT 306
Query: 128 GFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRG 168
+ E M+ + EM+ G P+ T+ LI + +G
Sbjct: 307 AYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKG 347
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 118/263 (44%), Gaps = 9/263 (3%)
Query: 272 GGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEI-----YSGKIT 326
G+ E + K+ EM C+ ++++LL AY N K+ ++ +E+ + +
Sbjct: 135 SGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLV 194
Query: 327 THAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKI 386
T+ ++K L S D L+ F E +K G D+ + N +L + R++L + ++I
Sbjct: 195 TYNTMIKALCRKGSMDDILS----IFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRI 250
Query: 387 LKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCR 446
M + ++ YNS + +R + F + ++ + +GI PD+ +YN +I AY
Sbjct: 251 WDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRV 310
Query: 447 NGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNT 506
+ + E + NEMK+ PD VTY + A+ V + IK N
Sbjct: 311 DNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNM 370
Query: 507 YNSIVDWYCKLHLREEAYNFVHN 529
Y +V+ +EA V N
Sbjct: 371 YKPVVERLMGAGKIDEATQLVKN 393
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 105/220 (47%), Gaps = 9/220 (4%)
Query: 163 MYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEM-KRAGFV 221
+YG GM K+F E+ C + ++N LL+ + + E FKE+ ++ G
Sbjct: 131 LYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGIT 190
Query: 222 PERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKV 281
P+ T+NT+I A R GS D ++++ + + G PDL ++N +L R L+ + +++
Sbjct: 191 PDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRI 250
Query: 282 LSEMENGRCKPNEVTYSSLLHAYANGKEFEK----MNALAEEIYSGKITTHAVLLKTLVL 337
M++ PN +Y+S + K+F ++ + E S + T+ L+ +
Sbjct: 251 WDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRV 310
Query: 338 VNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRK 377
N+ L E + E K++G+ D T ++ L +K
Sbjct: 311 DNN----LEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKK 346
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 77/141 (54%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+++ G PDL +FNTL+ L+ E +++ +K L P++ +YN+ + +++
Sbjct: 218 ELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNK 277
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ +A+ ++ M++ G P + TY +LI+AY D LEE ++ N+M EK + PD TY
Sbjct: 278 KFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYC 337
Query: 124 TLLSGFVNAKKDELAMRVFEE 144
L+ + A+ V EE
Sbjct: 338 MLIPLLCKKGDLDRAVEVSEE 358
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
MKS+ L+P++ ++N+ + + +AL L + +K G+ PD+ TYNAL+ Y
Sbjct: 254 MKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNN 313
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHI--KPDVY 120
+E M+ +M+ +G P VTY LI + G L+ A+E+ + ++ + +P++Y
Sbjct: 314 LEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMY 371
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 172/382 (45%), Gaps = 57/382 (14%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEAL-ELFE--EIKLAGLRPDMVTYNALLDVYG 60
DM G+ P+ TF L+S C + EAL +L KL R ++ A++ +Y
Sbjct: 61 DMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYS 120
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K R K+A V ME + + VT+ ++I Y+R G ++ A ++ ++M E+ D+
Sbjct: 121 KRGRFKKARLVFDYMEDK----NSVTWNTMIDGYMRSGQVDNAAKMFDKMPER----DLI 172
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKP---------NICT--------------- 156
++T +++GFV E A+ F EM+ +G KP N CT
Sbjct: 173 SWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYV 232
Query: 157 -----------FNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLD 205
N+LI +Y G +VF ++ +V+WN+++ F NG
Sbjct: 233 LSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME----KRTVVSWNSVIVGFAANGNA 288
Query: 206 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRM-LEAGVTPDLSTYNA 264
E F++M+ GF P+ TF ++A S G ++ ++ M + ++P + Y
Sbjct: 289 HESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGC 348
Query: 265 VLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYAN-GKEFEKMNALAEEIYSG 323
++ +R G E + K++ M KPNEV SLL A +N G L + +
Sbjct: 349 LVDLYSRAGRLEDALKLVQSMP---MKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDL 405
Query: 324 KITTHA--VLLKTLVLVNSKFD 343
+ +H+ V+L + + K++
Sbjct: 406 NVKSHSNYVILSNMYAADGKWE 427
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 91/430 (21%), Positives = 172/430 (40%), Gaps = 94/430 (21%)
Query: 74 QMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAK 133
Q ++ + V++TS I+ R+G L EA + + M ++P+ T+ LLSG +
Sbjct: 26 QRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFT 85
Query: 134 KDELAMRVFEEMRTAGCK-----PNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPD 188
A+ + + CK ++ A+I MY RG F + VF ++ +
Sbjct: 86 SGSEALG--DLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYME----DKN 139
Query: 189 IVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERE--TFNTLISAYSRCGSFDQARAV 246
VTWNT++ + ++G + +F +M PER+ ++ +I+ + + G ++A
Sbjct: 140 SVTWNTMIDGYMRSGQVDNAAKMFDKM------PERDLISWTAMINGFVKKGYQEEALLW 193
Query: 247 YKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYAN 306
++ M +GV PD Y A++AAL N +++ +H Y
Sbjct: 194 FREMQISGVKPD---YVAIIAAL-----------------NACTNLGALSFGLWVHRYVL 233
Query: 307 GKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITT 366
++F+ + + +L+ + + + A F +KR + +
Sbjct: 234 SQDFK---------------NNVRVSNSLIDLYCRCGCVEFARQVFYNMEKR----TVVS 274
Query: 367 LNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREIL 426
N+++ GF + + SL+Y FRK +
Sbjct: 275 WNSVI---------------------VGFAANGNAHESLVY-------FRKMQ------- 299
Query: 427 EKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMK-DPAPVPDVVTYNTFVATYAANSMF 485
EKG +PD +++ + A G + E R MK D P + Y V Y+
Sbjct: 300 EKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRL 359
Query: 486 GEAIGVVQCM 495
+A+ +VQ M
Sbjct: 360 EDALKLVQSM 369
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 120/276 (43%), Gaps = 10/276 (3%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVL 72
DL ++ +I+ EEAL F E++++G++PD V A L+ + V
Sbjct: 170 DLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVH 229
Query: 73 KQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNA 132
+ + S+ F ++ SLI Y R G +E A ++ M K V ++ +++ GF
Sbjct: 230 RYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME----KRTVVSWNSVIVGFAAN 285
Query: 133 KKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA-CQCSPDIVT 191
++ F +M+ G KP+ TF + G+ E + F+ +K + SP I
Sbjct: 286 GNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEH 345
Query: 192 WNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG-SFDQARAVYKRM 250
+ L+ ++ + G + K ++ P +L++A S G + A + K +
Sbjct: 346 YGCLVDLYSRAG---RLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHL 402
Query: 251 LEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEME 286
+ V S Y + A G WE + K+ +M+
Sbjct: 403 TDLNVKSH-SNYVILSNMYAADGKWEGASKMRRKMK 437
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/352 (19%), Positives = 143/352 (40%), Gaps = 22/352 (6%)
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
S V+W + + + +NG +E + F +M AG P TF L+S CG F
Sbjct: 33 SETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSG---CGDFTSGSE 89
Query: 246 VYKRMLEA-----GVTPD-LSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
+L G+ + + A++ ++ G ++++ V ME+ N VT+++
Sbjct: 90 ALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMED----KNSVTWNT 145
Query: 300 LLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRG 359
++ Y + + + +++ + + ++ V K + EA F E + G
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFV----KKGYQEEALLWFREMQISG 201
Query: 360 IPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSE 419
+ D + A L+ ++ + +++ F ++ NSL+ L+ R +
Sbjct: 202 VKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFAR 261
Query: 420 MILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATY 479
+ + ++ + +S+N VI + NG E+ +M++ PD VT+ +
Sbjct: 262 QVFYNMEKRTV----VSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTAC 317
Query: 480 AANSMFGEAIGVVQCM-IKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
+ + E + Q M P Y +VD Y + E+A V ++
Sbjct: 318 SHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSM 369
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 148/337 (43%), Gaps = 43/337 (12%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
M +M+ ++PD TF L+ C S + + ++ G D+ N L+ +Y
Sbjct: 106 MYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYA 165
Query: 61 KSRRPKEAMEVLKQMESRGFP---PSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKP 117
K RR A V + G P +IV++T+++SAY ++G EALE+ +QM + +KP
Sbjct: 166 KCRRLGSARTVFE-----GLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKP 220
Query: 118 DVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVF 177
D ++L+ F + + + + G + +L MY G A +F
Sbjct: 221 DWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILF 280
Query: 178 KEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 237
++K SP+++ WN +++ + +NG E +F EM P+ + + ISA ++
Sbjct: 281 DKMK----SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336
Query: 238 GSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSE------------- 284
GS +QAR++Y+ + + D+ +A++ A+ G E + V
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396
Query: 285 ------------------MENGRCKPNEVTYSSLLHA 303
ME G PN+VT+ LL A
Sbjct: 397 VGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMA 433
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 165/366 (45%), Gaps = 25/366 (6%)
Query: 3 MDMKSQ--GLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
MD+K L L F L + S++ +++ EI+ PD++ +L +Y
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE-----PDLLI--SLNTMYA 268
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K + A + +M+S P+++ + ++IS Y ++G EA+++ ++M+ K ++PD
Sbjct: 269 KCGQVATAKILFDKMKS----PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTI 324
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
+ T+ +S E A ++E + + + ++ +ALI M+ G VF
Sbjct: 325 SITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRT 384
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
D+V W+ ++ +G +G E +++ M+R G P TF L+ A + G
Sbjct: 385 ----LDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMV 440
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
+ + RM + + P Y V+ L R G +Q+ +V+ M +P + +L
Sbjct: 441 REGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMP---VQPGVTVWGAL 497
Query: 301 LHAYANGKEFEKMNALAEEIYS--GKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKR 358
L A + E A++++S T H V L L +D +AE + K++
Sbjct: 498 LSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVR---VRMKEK 554
Query: 359 GIPHDI 364
G+ D+
Sbjct: 555 GLNKDV 560
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 104/528 (19%), Positives = 212/528 (40%), Gaps = 62/528 (11%)
Query: 33 ALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLIS 92
A ++F+++ RP + +NA++ Y ++ ++A+ + M+ P T+ L+
Sbjct: 72 ARQVFDDLP----RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLK 127
Query: 93 AYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKP 152
A L+ + Q+ DV+ L++ + ++ A VFE + +
Sbjct: 128 ACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLP--ER 185
Query: 153 NICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVF 212
I ++ A++ Y G E ++F +++ PD V ++L F + +
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 213 KEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARG 272
+ + G E + +L + Y++CG A+ ++ +M +P+L +NA+++ A+
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKM----KSPNLILWNAMISGYAKN 301
Query: 273 GLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLL 332
G ++ + EM N +P+ ++ +S + A A E+ ++ E Y G+ +
Sbjct: 302 GYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYE--YVGRSDYRDDVF 359
Query: 333 KTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYE 392
+ L++ F E A L F R + D+ +AM+ YG
Sbjct: 360 ISSALID-MFAKCGSVEGARLVF-DRTLDRDVVVWSAMIVGYG----------------- 400
Query: 393 SGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTE 452
LH R R++ + R + G+ P+ +++ ++ A +G + E
Sbjct: 401 ---------------LHGRA---REAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVRE 442
Query: 453 AKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
N M D P Y + +A V++CM Q P + +++
Sbjct: 443 GWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQ---PGVTVWGALLS 499
Query: 513 WYCKLHLREEAYNF-VHNLSSLD-------LHVSE-EEKGRLLERIAE 551
CK H E + L S+D + +S RL +R+AE
Sbjct: 500 -ACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAE 546
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 120/517 (23%), Positives = 228/517 (44%), Gaps = 57/517 (11%)
Query: 9 GLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEA 68
G D+ ++L+ +L+E +L++F+E+ D+ ++N ++ + +S ++A
Sbjct: 137 GYVCDVVVASSLVGMYAKFNLFENSLQVFDEMP----ERDVASWNTVISCFYQSGEAEKA 192
Query: 69 MEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSG 128
+E+ +MES GF P+ V+ T ISA R LE E+ + V+K + D Y + L+
Sbjct: 193 LELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDM 252
Query: 129 FVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMY---GDRGMFAE-MGKVFKE----- 179
+ E+A VF++M + ++ +N++IK Y GD E + ++ E
Sbjct: 253 YGKCDCLEVAREVFQKMP----RKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPS 308
Query: 180 -------IKACQCS-------------------PDIVTWNTLLAVFGQNGLDSEVSGVFK 213
+ AC S DI +L+ ++ + G + VF
Sbjct: 309 QTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFS 368
Query: 214 EMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGG 273
+ ++ E++N +IS+Y G++ +A VY +M+ GV PD+ T+ +VL A ++
Sbjct: 369 KTQK----DVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLA 424
Query: 274 LWEQSEKVLSEMENGRCKPNEVTYSSLLHAYAN-GKEFEKMNALAEEIYSGKITTHAVLL 332
E+ +++ + R + +E+ S+LL Y+ G E E A I++ V
Sbjct: 425 ALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKE-----AFRIFNSIPKKDVVSW 479
Query: 333 KTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYE 392
++ EA + F E +K G+ D TL A+LS G L+ + K M
Sbjct: 480 TVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRS 539
Query: 393 S-GFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMT 451
G + Y+ ++ + R ++ I+++ E +L+S + A C + + +
Sbjct: 540 KYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLS--TLFSACCLHLEHS 597
Query: 452 EAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEA 488
RI + + P D TY YA+ + A
Sbjct: 598 LGDRIARLLVENYP-DDASTYMVLFNLYASGESWDAA 633
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/531 (21%), Positives = 219/531 (41%), Gaps = 55/531 (10%)
Query: 38 EEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRD 97
+ I GLR D+V +L++VY + A V + + R + + SL+S Y ++
Sbjct: 28 QRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRS---DVYIWNSLMSGYSKN 84
Query: 98 GLLEEALELKNQMVEKHI-KPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICT 156
+ + LE+ +++ I PD +T+ ++ + ++ L + + +G ++
Sbjct: 85 SMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVV 144
Query: 157 FNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMK 216
++L+ MY +F +VF E+ D+ +WNT+++ F Q+G + +F M+
Sbjct: 145 ASSLVGMYAKFNLFENSLQVFDEMP----ERDVASWNTVISCFYQSGEAEKALELFGRME 200
Query: 217 RAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPD------------------ 258
+GF P + ISA SR ++ + ++++ ++ G D
Sbjct: 201 SSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLE 260
Query: 259 -------------LSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA 305
L +N+++ G + ++L+ M +P++ T +S+L A +
Sbjct: 261 VAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACS 320
Query: 306 NGKEFEKMNALAEEIYSGKITTHAVLLKTLV---LVNSKFDFLAEAEHAFLEFKKRGIPH 362
+ N L + G + V V L++ F EA A F K
Sbjct: 321 RSR-----NLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFK-CGEANLAETVFSK--TQK 372
Query: 363 DIT-TLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMI 421
D+ + N M+S Y K ++ M G + + S++ S+ K + I
Sbjct: 373 DVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQI 432
Query: 422 LREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAA 481
I E +E D + + ++ Y + G EA RI N + P DVV++ ++ Y +
Sbjct: 433 HLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSI----PKKDVVSWTVMISAYGS 488
Query: 482 NSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSS 532
+ EA+ M K G KPD T +++ L +E F + S
Sbjct: 489 HGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRS 539
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 112/527 (21%), Positives = 225/527 (42%), Gaps = 28/527 (5%)
Query: 10 LAPDLCTFNTLISCCRAGSLYEEALELFEEI-KLAGLRPDMVTYNALLDVYGKSRRPKEA 68
+ D+ +N+L+S S++ + LE+F+ + + PD T+ ++ YG R
Sbjct: 67 IRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLG 126
Query: 69 MEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSG 128
+ + G+ +V +SL+ Y + L E +L++ ++M E+ DV ++ T++S
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPER----DVASWNTVISC 182
Query: 129 FVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGK-VFKEIKACQCSP 187
F + + E A+ +F M ++G +PN + I R ++ E GK + ++
Sbjct: 183 FYQSGEAEKALELFGRMESSGFEPNSVSLTVAISA-CSRLLWLERGKEIHRKCVKKGFEL 241
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVY 247
D + L+ ++G+ VF++M R V +N++I Y G +
Sbjct: 242 DEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLV----AWNSMIKGYVAKGDSKSCVEIL 297
Query: 248 KRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG 307
RM+ G P +T ++L A +R + + + + SL+ Y
Sbjct: 298 NRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKC 357
Query: 308 KEFEKMNALAEEIYSGKITTHA----VLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
E LAE ++S A V++ + + V + F +A + + G+ D
Sbjct: 358 GEAN----LAETVFSKTQKDVAESWNVMISSYISVGNWF----KAVEVYDQMVSVGVKPD 409
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILR 423
+ T ++L + + K +I + ES ++L+ ++S+ N +++ I
Sbjct: 410 VVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFN 469
Query: 424 EILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANS 483
I +K D++S+ ++I AY +G+ EA +EM+ PD VT ++
Sbjct: 470 SIPKK----DVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAG 525
Query: 484 MFGEAIGVV-QCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHN 529
+ E + Q K G +P Y+ ++D + EAY +
Sbjct: 526 LIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQ 572
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 122/253 (48%), Gaps = 10/253 (3%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M S G+ PD+ TF +++ C + E+ ++ I + L D + +ALLD+Y K
Sbjct: 401 MVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGN 460
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
KEA + + + +V++T +ISAY G EAL ++M + +KPD T
Sbjct: 461 EKEAFRIFNSIPKK----DVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLA 516
Query: 125 LLSGFVNAKKDELAMRVFEEMRTA-GCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
+LS +A + ++ F +MR+ G +P I ++ +I + G G E ++ ++
Sbjct: 517 VLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPET 576
Query: 184 QCSPDIV-TWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
+ +++ T + + ++ L ++ + E + + T+ L + Y+ S+D
Sbjct: 577 SDNAELLSTLFSACCLHLEHSLGDRIARLLVE----NYPDDASTYMVLFNLYASGESWDA 632
Query: 243 ARAVYKRMLEAGV 255
AR V +M E G+
Sbjct: 633 ARRVRLKMKEMGL 645
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/404 (20%), Positives = 169/404 (41%), Gaps = 45/404 (11%)
Query: 141 VFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFG 200
V + + T G + ++ +LI +Y VF+ D+ WN+L++ +
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDI---RSDVYIWNSLMSGYS 82
Query: 201 QNGLDSEVSGVFKEMKRAGF-VPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDL 259
+N + + VFK + VP+ TF +I AY G R ++ ++++G D+
Sbjct: 83 KNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDV 142
Query: 260 STYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEE 319
++++ A+ L+E S +V EM + + ++++++ + E EK L
Sbjct: 143 VVASSLVGMYAKFNLFENSLQVFDEMP----ERDVASWNTVISCFYQSGEAEKALELFGR 198
Query: 320 IYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYG---- 375
+ S ++V L + S+ +L + + K+G D +A++ +YG
Sbjct: 199 MESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDC 258
Query: 376 ------------RKKLVAKTN---------------KILKFMYESGFTLSLPGYNSLMYL 408
RK LVA + +IL M G S S++
Sbjct: 259 LEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMA 318
Query: 409 HSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNE-MKDPAPVP 467
SR+RN + I ++ + D+ +I Y + G+ A+ + ++ KD A
Sbjct: 319 CSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAE-- 376
Query: 468 DVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
++N +++Y + + +A+ V M+ G KPD T+ S++
Sbjct: 377 ---SWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVL 417
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 73/150 (48%), Gaps = 6/150 (4%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLA-GLRPDMVTYNALLDVYGKS 62
+M+ GL PD T ++S C L +E L+ F +++ G+ P + Y+ ++D+ G++
Sbjct: 501 EMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRA 560
Query: 63 RRPKEAMEVLKQM-ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYT 121
R EA E+++Q E+ + T S ++ L + L +VE + D T
Sbjct: 561 GRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARL---LVENY-PDDAST 616
Query: 122 YTTLLSGFVNAKKDELAMRVFEEMRTAGCK 151
Y L + + + + + A RV +M+ G +
Sbjct: 617 YMVLFNLYASGESWDAARRVRLKMKEMGLR 646
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 146/327 (44%), Gaps = 42/327 (12%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEI-KLAGLRPDMVTYNALLDVYGKSRRPKEAME 70
PD T ++IS C + S + E+ + K LR D++ NA +D+Y K R KEA
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 71 VLKQMESR----------GFPPS-----------------IVTYTSLISAYVRDGLLEEA 103
+ M R G+ + +V++ +LI+ Y ++G EEA
Sbjct: 311 IFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEA 370
Query: 104 LELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCK------PNICTF 157
L L + + + P Y++ +L + + L M+ + G K +I
Sbjct: 371 LSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVG 430
Query: 158 NALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKR 217
N+LI MY G E VF+++ C V+WN ++ F QNG +E +F+EM
Sbjct: 431 NSLIDMYVKCGCVEEGYLVFRKMMERDC----VSWNAMIIGFAQNGYGNEALELFREMLE 486
Query: 218 AGFVPERETFNTLISAYSRCGSFDQARAVYKRML-EAGVTPDLSTYNAVLAALARGGLWE 276
+G P+ T ++SA G ++ R + M + GV P Y ++ L R G E
Sbjct: 487 SGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLE 546
Query: 277 QSEKVLSEMENGRCKPNEVTYSSLLHA 303
+++ ++ EM +P+ V + SLL A
Sbjct: 547 EAKSMIEEMP---MQPDSVIWGSLLAA 570
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 110/531 (20%), Positives = 215/531 (40%), Gaps = 67/531 (12%)
Query: 43 AGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEE 102
+G ++ N L+D Y K ++ +V +M R +I T+ S+++ + G L+E
Sbjct: 49 SGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQR----NIYTWNSVVTGLTKLGFLDE 104
Query: 103 ALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTF----- 157
A L M E+ D T+ +++SGF + E A+ F M G N +F
Sbjct: 105 ADSLFRSMPER----DQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLS 160
Query: 158 ------------------------------NALIKMYGDRGMFAEMGKVFKEIKACQCSP 187
+AL+ MY G + +VF E+
Sbjct: 161 ACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG----DR 216
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVY 247
++V+WN+L+ F QNG E VF+ M + P+ T ++ISA + + + V+
Sbjct: 217 NVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVH 276
Query: 248 KRMLEAG-VTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYAN 306
R+++ + D+ NA + A+ +++ + M N + +S++ YA
Sbjct: 277 GRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP----IRNVIAETSMISGYAM 332
Query: 307 GKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI-PHDIT 365
+ A +++ + V L+ ++ EA F K+ + P +
Sbjct: 333 AASTKA----ARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYS 388
Query: 366 TLNAMLSLYGRKKL---VAKTNKILK--FMYESGFTLSLPGYNSLMYLHSRTRNFRKSEM 420
N + + +L + +LK F ++SG + NSL+ ++ + + +
Sbjct: 389 FANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYL 448
Query: 421 ILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYA 480
+ R+++E+ D +S+N +I + +NG EA + EM + PD +T ++
Sbjct: 449 VFRKMMER----DCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACG 504
Query: 481 ANSMFGEAIGVVQCMIKQ-GCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
E M + G P ++ Y +VD + EEA + + +
Sbjct: 505 HAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM 555
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/368 (20%), Positives = 149/368 (40%), Gaps = 77/368 (20%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M +G + +F +++S C + + +++ I + D+ +AL+D+Y K
Sbjct: 143 MHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGN 202
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+A V +M R ++V++ SLI+ + ++G EAL++ M+E ++PD T +
Sbjct: 203 VNDAQRVFDEMGDR----NVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLAS 258
Query: 125 LLSGFVNAKKDELAMRVFEE-MRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI--- 180
++S + ++ V ++ + +I NA + MY E +F +
Sbjct: 259 VISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Query: 181 ------------------KACQ------CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMK 216
KA + ++V+WN L+A + QNG + E +F +K
Sbjct: 319 NVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLK 378
Query: 217 RAGFVPERETF-----------------------------------------NTLISAYS 235
R P +F N+LI Y
Sbjct: 379 RESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYV 438
Query: 236 RCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEV 295
+CG ++ V+++M+E D ++NA++ A+ G ++ ++ EM KP+ +
Sbjct: 439 KCGCVEEGYLVFRKMMER----DCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHI 494
Query: 296 TYSSLLHA 303
T +L A
Sbjct: 495 TMIGVLSA 502
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 114/536 (21%), Positives = 224/536 (41%), Gaps = 82/536 (15%)
Query: 16 TFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQM 75
T+N++++ +EA LF + D T+N+++ + + R +EA+ M
Sbjct: 88 TWNSVVTGLTKLGFLDEADSLFRSMP----ERDQCTWNSMVSGFAQHDRCEEALCYFAMM 143
Query: 76 ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKD 135
GF + ++ S++SA + + +++ + + + DVY + L+ +
Sbjct: 144 HKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNV 203
Query: 136 ELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTL 195
A RVF+EM N+ ++N+LI + G E VF+ + + PD VT ++
Sbjct: 204 NDAQRVFDEMG----DRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASV 259
Query: 196 LA-----------------VFGQNGLDSEV--SGVFKEM-------KRAGFV----PERE 225
++ V + L +++ S F +M K A F+ P R
Sbjct: 260 ISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRN 319
Query: 226 TF--NTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLS 283
++IS Y+ S AR ++ +M E V ++NA++A + G E++ +
Sbjct: 320 VIAETSMISGYAMAASTKAARLMFTKMAERNVV----SWNALIAGYTQNGENEEALSLFC 375
Query: 284 EMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFD 343
++ P +++++L A A+ LA E++ G + H +LK
Sbjct: 376 LLKRESVCPTHYSFANILKACAD---------LA-ELHLG-MQAHVHVLK---------- 414
Query: 344 FLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYN 403
H F +F+ G DI N+++ +Y + V + + + M E +N
Sbjct: 415 ------HGF-KFQS-GEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCV----SWN 462
Query: 404 SLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEM-KD 462
+++ ++ ++ + RE+LE G +PD I+ V+ A G + E + + M +D
Sbjct: 463 AMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRD 522
Query: 463 PAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLH 518
P Y V EA +++ M Q PD + S++ CK+H
Sbjct: 523 FGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQ---PDSVIWGSLLA-ACKVH 574
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 135/303 (44%), Gaps = 17/303 (5%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M + PDL TF L + C+ + + G D+ N + +Y KS
Sbjct: 247 MLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSED 306
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
A + M SR + V++T +IS Y G ++EAL L + M++ KPD+ T +
Sbjct: 307 TCSARLLFDIMTSR----TCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLS 362
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCK-PNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
L+SG E + GCK N+ NALI MY G E +F
Sbjct: 363 LISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDN---- 418
Query: 184 QCSPD--IVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFD 241
+P+ +VTW T++A + NG+ E +F +M + P TF ++ A + GS +
Sbjct: 419 --TPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLE 476
Query: 242 QARAVYKRMLEA-GVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
+ + M + ++P L Y+ ++ L R G + E+ L + N KP+ + +L
Sbjct: 477 KGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKG---KLEEALELIRNMSAKPDAGIWGAL 533
Query: 301 LHA 303
L+A
Sbjct: 534 LNA 536
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 107/487 (21%), Positives = 195/487 (40%), Gaps = 59/487 (12%)
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
P E++ + ++M+ GF P+ T+ + A R + + +++ DV+ T
Sbjct: 33 PVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTA 92
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
+ FV + A +VFE M + + T+NA++ + G + +F+E++ +
Sbjct: 93 TVDMFVKCNSVDYAAKVFERMP----ERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNE 148
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
+PD VT TL+ + + R G + NT IS Y +CG D A+
Sbjct: 149 ITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAK 208
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGG------------LWEQSEKVLSEMEN--GRC 290
V++ + T + ++N++ A + G L E+ + LS N C
Sbjct: 209 LVFEAIDRGDRT--VVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASC 266
Query: 291 K-PNEVTYSSLLHAYA----NGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFL 345
+ P +T L+H++A ++ E +N + T A LL FD +
Sbjct: 267 QNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLL---------FDIM 317
Query: 346 AEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSL 405
+ M+S Y K + + + M +SG P +L
Sbjct: 318 TS--------------RTCVSWTVMISGYAEKGDMDEALALFHAMIKSG---EKPDLVTL 360
Query: 406 MYLHSRTRNFRKSE----MILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMK 461
+ L S F E + R + +++ N +I Y + G + EA+ I
Sbjct: 361 LSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIF---- 416
Query: 462 DPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLRE 521
D P VVT+ T +A YA N +F EA+ + MI KP+ T+ +++ E
Sbjct: 417 DNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLE 476
Query: 522 EAYNFVH 528
+ + + H
Sbjct: 477 KGWEYFH 483
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 142/372 (38%), Gaps = 83/372 (22%)
Query: 13 DLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTY------------------- 52
D T+N ++S C++G ++A LF E++L + PD VT
Sbjct: 117 DATTWNAMLSGFCQSGHT-DKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAM 175
Query: 53 ----------------NALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVR 96
N + YGK A V + ++ RG ++V++ S+ AY
Sbjct: 176 HAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAID-RG-DRTVVSWNSMFKAYSV 233
Query: 97 DGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICT 156
G +A L M+ + KPD+ T+ L + N + + G +I
Sbjct: 234 FGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEA 293
Query: 157 FNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMK 216
N I MY +F + + C V+W +++ + + G E +F M
Sbjct: 294 INTFISMYSKSEDTCSARLLFDIMTSRTC----VSWTVMISGYAEKGDMDEALALFHAMI 349
Query: 217 RAGFVPERETF------------------------------------NTLISAYSRCGSF 240
++G P+ T N LI YS+CGS
Sbjct: 350 KSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSI 409
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
+AR ++ E V T+ ++A A G++ ++ K+ S+M + KPN +T+ ++
Sbjct: 410 HEARDIFDNTPEKTVV----TWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAV 465
Query: 301 LHAYANGKEFEK 312
L A A+ EK
Sbjct: 466 LQACAHSGSLEK 477
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 103/538 (19%), Positives = 200/538 (37%), Gaps = 75/538 (13%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ +MK G P+ TF + C + + + + D+ A +D++
Sbjct: 39 LFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFV 98
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K A +V ++M R T+ +++S + + G ++A L +M I PD
Sbjct: 99 KCNSVDYAAKVFERMPER----DATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSV 154
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCK----PNICTFNALIKMYGDRGMFAEMGKV 176
T TL + + E ++++ E M G + + N I YG G V
Sbjct: 155 TVMTL----IQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLV 210
Query: 177 FKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 236
F+ I + +V+WN++ + G + G++ M R F P+ TF L ++
Sbjct: 211 FEAID--RGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQN 268
Query: 237 CGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVT 296
+ Q R ++ + G D+ N ++ ++ + + M + C V+
Sbjct: 269 PETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTC----VS 324
Query: 297 YSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFK 356
++ ++ YA + ++ AL + V L +L+ KF L +
Sbjct: 325 WTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARAD 384
Query: 357 KRGIPHD-ITTLNAMLSLYGR----------------KKLVAKTNKILKFMYESGFTLSL 399
G D + NA++ +Y + K +V T I + F +L
Sbjct: 385 IYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEAL 444
Query: 400 PGYNSLMYLHSRTRNFRKSEMILREIL---------EKG------------IEPDLISYN 438
++ ++ L +++ + + +L EKG I P L Y+
Sbjct: 445 KLFSKMIDL-----DYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYS 499
Query: 439 IVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTY-----------NTFVATYAANSMF 485
++ R GK+ EA ++ M + PD + N +A AA S+F
Sbjct: 500 CMVDLLGRKGKLEEALELIRNM---SAKPDAGIWGALLNACKIHRNVKIAEQAAESLF 554
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 117/234 (50%), Gaps = 4/234 (1%)
Query: 3 MDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
M+M + G+ D+ +++++ISC G + L+LF+ +K + PD YNA++ K+
Sbjct: 291 MEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKA 350
Query: 63 RRPKEAMEVLKQM-ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYT 121
EA ++K M E +G P++VTY SLI + EEA ++ ++M+EK + P + T
Sbjct: 351 SFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRT 410
Query: 122 YTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK 181
Y + + E + +MR GC+P + T+ LI+ F + ++ E+K
Sbjct: 411 YHAFMRIL---RTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMK 467
Query: 182 ACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYS 235
PD+ ++ ++ NG E G +KEMK G P + + S +S
Sbjct: 468 EKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFS 521
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 135/285 (47%), Gaps = 14/285 (4%)
Query: 50 VTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQ 109
+ N +V G P+EA V +M + G +V+Y+S+IS Y + G L + L+L ++
Sbjct: 271 IVLNGWCNVIGS---PREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDR 327
Query: 110 MVEKHIKPDVYTYTTLLSGFVNAKKDELA---MRVFEEMRTAGCKPNICTFNALIKMYGD 166
M ++ I+PD Y ++ A A M+ EE + G +PN+ T+N+LIK
Sbjct: 328 MKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEK--GIEPNVVTYNSLIKPLCK 385
Query: 167 RGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERET 226
E +VF E+ P I T++ + + EV + +M++ G P ET
Sbjct: 386 ARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTG---EEVFELLAKMRKMGCEPTVET 442
Query: 227 FNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEME 286
+ LI R FD ++ M E V PDLS+Y ++ L G E++ EM+
Sbjct: 443 YIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMK 502
Query: 287 NGRCKPNEVTYSSLLHAYANGKEF--EKMNALAEEIYSGKITTHA 329
+ +PNE ++ ++ +GK++ +++ E+ G I +
Sbjct: 503 DKGMRPNE-NVEDMIQSWFSGKQYAEQRITDSKGEVNKGAIVKKS 546
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 180/428 (42%), Gaps = 38/428 (8%)
Query: 105 ELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMY 164
EL+N++ E +KP +LS N + V+ + G ++ ++++I +
Sbjct: 113 ELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAG-KQQGYVRSVREYHSMISIL 171
Query: 165 GDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVS---GVFKEMKRAGFV 221
G F + E++ + SP +V TLL + + +V F KR
Sbjct: 172 GKMRKFDTAWTLIDEMR--KFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLE 229
Query: 222 PERETFNTLISAYSRCGSFDQARAVYKRMLEAG---------VTPDLSTYNAVLAALARG 272
+ F +L+SA R YK + +AG D ++N VL
Sbjct: 230 MGIDDFQSLLSALCR----------YKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNV 279
Query: 273 -GLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVL 331
G ++E+V EM N K + V+YSS++ Y+ G K+ L + + I +
Sbjct: 280 IGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKV 339
Query: 332 LKTLVLVNSKFDFLAEAEHAFLEFKK-RGIPHDITTLNAMLSLYGRKKLVAKTNKILKFM 390
+V +K F++EA + ++ +GI ++ T N+++ + + + ++ M
Sbjct: 340 YNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEM 399
Query: 391 YESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEK----GIEPDLISYNIVIYAYCR 446
E G ++ Y++ M R R E + E+L K G EP + +Y ++I CR
Sbjct: 400 LEKGLFPTIRTYHAFM------RILRTGEEVF-ELLAKMRKMGCEPTVETYIMLIRKLCR 452
Query: 447 NGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNT 506
+ +EMK+ PD+ +Y + N EA G + M +G +P++N
Sbjct: 453 WRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENV 512
Query: 507 YNSIVDWY 514
+ I W+
Sbjct: 513 EDMIQSWF 520
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 87/171 (50%), Gaps = 4/171 (2%)
Query: 347 EAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLM 406
EAE ++E G+ HD+ + ++M+S Y + + K K+ M + YN+++
Sbjct: 285 EAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVV 344
Query: 407 YLHSRTRNFRKSEMILREILE-KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAP 465
+ ++ ++ +++ + E KGIEP++++YN +I C+ K EAK++ +EM +
Sbjct: 345 HALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGL 404
Query: 466 VPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
P + TY+ F+ E ++ M K GC+P TY ++ C+
Sbjct: 405 FPTIRTYHAFMRILRTGE---EVFELLAKMRKMGCEPTVETYIMLIRKLCR 452
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 115/237 (48%), Gaps = 18/237 (7%)
Query: 297 YSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKF---DFLAEAEHAFL 353
Y S++ ++F+ L +E+ K + V +TL+++ K+ + +A + F
Sbjct: 164 YHSMISILGKMRKFDTAWTLIDEMR--KFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFH 221
Query: 354 EFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKIL-----KFMYES-GFTLSLPGYNSLMY 407
+K+ + I ++LS R K V+ ++ K+ +++ F + L G+ +++
Sbjct: 222 AYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVI- 280
Query: 408 LHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVP 467
+ R++E + E+ G++ D++SY+ +I Y + G + + ++ + MK P
Sbjct: 281 -----GSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEP 335
Query: 468 DVVTYNTFVATYAANSMFGEAIGVVQCMIKQ-GCKPDQNTYNSIVDWYCKLHLREEA 523
D YN V A S EA +++ M ++ G +P+ TYNS++ CK EEA
Sbjct: 336 DRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEA 392
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 433 DLISYNIVIYAYCRN-GKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGV 491
D S+NIV+ +C G EA+R+ EM + DVV+Y++ ++ Y+ + + +
Sbjct: 265 DAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKL 324
Query: 492 VQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEKG 543
M K+ +PD+ YN++V K EA N + + EEEKG
Sbjct: 325 FDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTM--------EEEKG 368
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 141/331 (42%), Gaps = 33/331 (9%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
+ + G P+ + C L EEA+E++ +K G+ +VT N++L K+R+
Sbjct: 136 LDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARK 195
Query: 65 ---------------------------------PKEAMEVLKQMESRGFPPSIVTYTSLI 91
E E+LKQ +G P Y LI
Sbjct: 196 LDRFWELHKEMVESEFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLI 255
Query: 92 SAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCK 151
S + G E+ + M+ + P +Y Y ++ G KK A +F+ ++ G
Sbjct: 256 SGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYA 315
Query: 152 PNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGV 211
P+ + +I+ + ++G K++ E+ P+ +N ++ + G S V
Sbjct: 316 PDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAF 375
Query: 212 FKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALAR 271
+ EM R G+ + NT+I + G D+A ++K M E GVTP+ TYNA++ +
Sbjct: 376 YNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCK 435
Query: 272 GGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
E+ K+ E++ KP+ + Y++L+
Sbjct: 436 ENKVEKGLKLYKELKALGLKPSGMAYAALVR 466
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 103/246 (41%), Gaps = 1/246 (0%)
Query: 24 CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPS 83
C G + E EL ++ GL P Y L+ + + EVL M + PS
Sbjct: 224 CDGGDV-SEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPS 282
Query: 84 IVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFE 143
+ Y +I + EA + + +K PD YTT++ GF A +++
Sbjct: 283 MYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWF 342
Query: 144 EMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNG 203
EM G +PN +N +I + RG + + + E+ +++ NT++ F +G
Sbjct: 343 EMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHG 402
Query: 204 LDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYN 263
E +FK M G P T+N LI + + ++ +YK + G+ P Y
Sbjct: 403 KSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYA 462
Query: 264 AVLAAL 269
A++ L
Sbjct: 463 ALVRNL 468
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 2/163 (1%)
Query: 1 MLMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+ ++K +G APD + T+I C G L FE IK G+RP+ YN ++ +
Sbjct: 305 IFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIK-KGMRPNEFAYNVMIHGH 363
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
K +M G+ ++++ ++I + G +EA E+ M E + P+
Sbjct: 364 FKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNA 423
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIK 162
TY L+ GF K E +++++E++ G KP+ + AL++
Sbjct: 424 ITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVR 466
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 154/376 (40%), Gaps = 23/376 (6%)
Query: 50 VTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQ 109
+ + ALLD GK+ + ++ +++ GF P + +GL+EEA+E+ N
Sbjct: 118 ILFGALLD--GKAVKAAKSF-----LDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNV 170
Query: 110 MVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGM 169
+ + I V T ++L G + A+K + + +EM + LI+ D G
Sbjct: 171 LKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSE--RIRCLIRALCDGGD 228
Query: 170 FAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNT 229
+E ++ K+ P + L++ F + G + +S V M P +
Sbjct: 229 VSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQK 288
Query: 230 LISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGR 289
+I +A ++K + + G PD Y ++ G + K+ EM
Sbjct: 289 IIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKG 348
Query: 290 CKPNEVTYSSLLHAYANGKEFEKMNALAEEI----YSGKITTHAVLLKTLVLVNSKFDFL 345
+PNE Y+ ++H + E + A E+ Y G + + ++K + K D
Sbjct: 349 MRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFC-SHGKSD-- 405
Query: 346 AEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSL 405
EA F + G+ + T NA++ + ++ V K K+ K + G S Y +L
Sbjct: 406 -EAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAAL 464
Query: 406 MYLHSRTRNFRKSEMI 421
+ RN + S+ +
Sbjct: 465 V------RNLKMSDSV 474
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 133/368 (36%), Gaps = 39/368 (10%)
Query: 145 MRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNT-LLAVFGQNG 203
+ T G KP +K + G+ E +V+ +K S +VT N+ LL
Sbjct: 136 LDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARK 195
Query: 204 LDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYN 263
LD + KEM + F ER LI A G + + K+ L+ G+ P Y
Sbjct: 196 LD-RFWELHKEMVESEFDSER--IRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYA 252
Query: 264 AVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSG 323
+++ G N S +LH F M
Sbjct: 253 KLISGFCEIG-------------------NYACMSEVLHTMIAWNHFPSM---------- 283
Query: 324 KITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKT 383
+ ++K L + + EA F K +G D M+ + K +
Sbjct: 284 --YIYQKIIKGLCMNKKQL----EAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSA 337
Query: 384 NKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYA 443
K+ M + G + YN +++ H + E E+L G ++S N +I
Sbjct: 338 RKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKG 397
Query: 444 YCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPD 503
+C +GK EA I M + P+ +TYN + + + + + + + + G KP
Sbjct: 398 FCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPS 457
Query: 504 QNTYNSIV 511
Y ++V
Sbjct: 458 GMAYAALV 465
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 153/373 (41%), Gaps = 45/373 (12%)
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKE-MKRAGFVPERETFNTLISAYSRC----GSF 240
+P V+ N L LD + K + GF PE TL+ Y +C G
Sbjct: 110 TPGPVSLNILFGAL----LDGKAVKAAKSFLDTTGFKPE----PTLLEQYVKCLSEEGLV 161
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGG----LWE-QSEKVLSEMENGRCKPNEV 295
++A VY + + G++ + T N+VL + WE E V SE ++ R +
Sbjct: 162 EEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERIR---- 217
Query: 296 TYSSLLHAYANGKEF-EKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLE 354
L+ A +G + E L + + G V K + ++ +E
Sbjct: 218 ---CLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSE----- 269
Query: 355 FKKRGIPHDITTLNAMLSLYGRKKLVAK--TNK-------ILKFMYESGFTLSLPGYNSL 405
+ H + N S+Y +K++ NK I K + + G+ Y ++
Sbjct: 270 -----VLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTM 324
Query: 406 MYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAP 465
+ + + E+++KG+ P+ +YN++I+ + + G+++ + NEM
Sbjct: 325 IRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGY 384
Query: 466 VPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYN 525
+++ NT + + ++ EA + + M + G P+ TYN+++ +CK + E+
Sbjct: 385 GGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLK 444
Query: 526 FVHNLSSLDLHVS 538
L +L L S
Sbjct: 445 LYKELKALGLKPS 457
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 120/516 (23%), Positives = 218/516 (42%), Gaps = 92/516 (17%)
Query: 13 DLCTFNTLIS---CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAM 69
D+ T+NT+IS C EEA +LF+E+ D ++N ++ Y K+RR EA+
Sbjct: 101 DVVTWNTMISGYVSCGGIRFLEEARKLFDEMP----SRDSFSWNTMISGYAKNRRIGEAL 156
Query: 70 EVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGF 129
+ ++M R + V+++++I+ + ++G ++ A+ L +M K P L++G
Sbjct: 157 LLFEKMPER----NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP----LCALVAGL 208
Query: 130 VNAKKDELAMRVFEEMRT--AGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSP 187
+ ++ A V + + +G + + +N LI YG RG +F +I P
Sbjct: 209 IKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQI------P 262
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVY 247
D+ G D G F+E F ++N++I AY + G AR ++
Sbjct: 263 DLC------------GDDH--GGEFRER----FCKNVVSWNSMIKAYLKVGDVVSARLLF 304
Query: 248 KRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG 307
+M + D ++N ++ E + + SEM N + +++ ++ YA+
Sbjct: 305 DQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEMPN----RDAHSWNMMVSGYASV 356
Query: 308 KEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTL 367
E LA + H V +++ K EA F+ G D TL
Sbjct: 357 GNVE----LARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTL 412
Query: 368 NAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILE 427
++LS A T + N R M + +I+
Sbjct: 413 TSLLS--------ASTGLV---------------------------NLRLG-MQMHQIVV 436
Query: 428 KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGE 487
K + PD+ +N +I Y R G++ E++RI +EMK +V+T+N + YA + E
Sbjct: 437 KTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKR---EVITWNAMIGGYAFHGNASE 493
Query: 488 AIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEA 523
A+ + M G P T+ S+++ L +EA
Sbjct: 494 ALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEA 529
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 147/295 (49%), Gaps = 22/295 (7%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVL 72
D ++NT+I S E+A LF E+ D ++N ++ Y + A
Sbjct: 311 DTISWNTMIDGYVHVSRMEDAFALFSEMP----NRDAHSWNMMVSGYASVGNVELARHYF 366
Query: 73 KQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLS---GF 129
++ + V++ S+I+AY ++ +EA++L +M + KPD +T T+LLS G
Sbjct: 367 EKTPEK----HTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGL 422
Query: 130 VNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDI 189
VN + L M++ ++ P++ NALI MY G E ++F E+K ++
Sbjct: 423 VNLR---LGMQM-HQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMK---LKREV 475
Query: 190 VTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKR 249
+TWN ++ + +G SE +F MK G P TF ++++A + G D+A+A +
Sbjct: 476 ITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVS 535
Query: 250 MLEA-GVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
M+ + P + Y++++ + G +E++ +++ M +P++ + +LL A
Sbjct: 536 MMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMP---FEPDKTVWGALLDA 587
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 139/315 (44%), Gaps = 48/315 (15%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVL 72
D ++N ++S + E A FE+ V++N+++ Y K++ KEA+++
Sbjct: 342 DAHSWNMMVSGYASVGNVELARHYFEKTP----EKHTVSWNSIIAAYEKNKDYKEAVDLF 397
Query: 73 KQMESRGFPPSIVTYTSLISAYVRDGLLEEALELK-NQMVEKHIKPDVYTYTTLLSGFVN 131
+M G P T TSL+SA GL+ L ++ +Q+V K + PDV + L++ +
Sbjct: 398 IRMNIEGEKPDPHTLTSLLSAST--GLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSR 455
Query: 132 AKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVT 191
+ + R+F+EM+ K + T+NA+I Y G +E +F +K+ P +T
Sbjct: 456 CGEIMESRRIFDEMK---LKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHIT 512
Query: 192 WNTLLAVFGQNGLDSEVSGVFKEMKRAGFV-PERETFNTLISAYSRCGSFDQARAVYKRM 250
+ ++L GL E F M + P+ E +++L++ S G F++A + M
Sbjct: 513 FVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSM 572
Query: 251 LEAGVTPDLSTYNAVLAA----------------------------------LARGGLWE 276
PD + + A+L A A GLW+
Sbjct: 573 ---PFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWD 629
Query: 277 QSEKVLSEMENGRCK 291
++ +V ME+ R K
Sbjct: 630 EASQVRMNMESKRIK 644
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 146/296 (49%), Gaps = 4/296 (1%)
Query: 9 GLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEA 68
GL + + N L+ E+A + ++K + + P+ T+N + + K+ R +EA
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK-SHITPNAHTFNIFIHGWCKANRVEEA 243
Query: 69 MEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSG 128
+ +++M+ GF P +++YT++I Y + + E+ ++M P+ TYTT++S
Sbjct: 244 LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
Query: 129 FVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFK-EIKACQCSP 187
K+ E A+RV M+ +GCKP+ +N LI G E +VF+ E+ S
Sbjct: 304 LNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSI 363
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFV-PERETFNTLISAYSRCGSFDQARAV 246
+ T+N+++A++ + + + + KEM+ + P+ T+ L+ + + G + +
Sbjct: 364 NTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKL 423
Query: 247 YKRML-EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL 301
K M+ + ++ D STY ++ L R + E + + EM + P T LL
Sbjct: 424 LKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLL 479
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 144/319 (45%), Gaps = 7/319 (2%)
Query: 14 LCTFNTLISCCR--AGS-LYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAME 70
L T NT+ R AG+ +EEA+ +F+ + GL + + N LLD K +R ++A
Sbjct: 152 LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARV 211
Query: 71 VLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFV 130
VL Q++S P+ T+ I + + +EEAL +M +P V +YTT++ +
Sbjct: 212 VLLQLKSH-ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYC 270
Query: 131 NAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIV 190
+ + EM G PN T+ ++ + F E +V +K C PD +
Sbjct: 271 QQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSL 330
Query: 191 TWNTLLAVFGQNGLDSEVSGVFK-EMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKR 249
+N L+ + G E VF+ EM G T+N++I+ Y D+A + K
Sbjct: 331 FYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKE 390
Query: 250 MLEAGV-TPDLSTYNAVLAALARGGLWEQSEKVLSEM-ENGRCKPNEVTYSSLLHAYANG 307
M + + PD+ TY +L + + G + K+L EM +E TY+ L+
Sbjct: 391 MESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRA 450
Query: 308 KEFEKMNALAEEIYSGKIT 326
E L EE+ S IT
Sbjct: 451 NMCEWAYCLFEEMISQDIT 469
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 109/228 (47%), Gaps = 3/228 (1%)
Query: 2 LMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGK 61
+ +MK G P + ++ T+I C + + E+ E++ G P+ +TY ++
Sbjct: 247 IQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNA 306
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALEL-KNQMVEKHIKPDVY 120
+ +EA+ V +M+ G P + Y LI R G LEEA + + +M E + +
Sbjct: 307 QKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTS 366
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAG-CKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TY ++++ + + +++ A+ + +EM ++ C P++ T+ L++ RG E+GK+ KE
Sbjct: 367 TYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKE 426
Query: 180 -IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERET 226
+ S D T+ L+ + + +F+EM P T
Sbjct: 427 MVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRT 474
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 153/370 (41%), Gaps = 42/370 (11%)
Query: 189 IVTWNTLLAV---FGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
+VT NT+ + F G E G+F + G E+ N L+ + +QAR
Sbjct: 152 LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARV 211
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA 305
V + L++ +TP+ T+N + + E++ + EM+ +P ++Y++++ Y
Sbjct: 212 VLLQ-LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYC 270
Query: 306 NGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDIT 365
EF K+ ++ L+E E G P +
Sbjct: 271 QQFEFIKV----------------------------YEMLSEME-------ANGSPPNSI 295
Query: 366 TLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILR-E 424
T ++S +K + ++ M SG YN L++ +R ++E + R E
Sbjct: 296 TYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVE 355
Query: 425 ILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPV-PDVVTYNTFVATYAANS 483
+ E G+ + +YN +I YC + + +A +L EM+ PDV TY + +
Sbjct: 356 MPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRG 415
Query: 484 MFGEAIGVVQCMI-KQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEK 542
E +++ M+ K D++TY ++ C+ ++ E AY + S D+
Sbjct: 416 DVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTC 475
Query: 543 GRLLERIAEK 552
LLE + +K
Sbjct: 476 LLLLEEVKKK 485
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 132/305 (43%), Gaps = 14/305 (4%)
Query: 225 ETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARG--GLWEQSEKVL 282
E +N ++ R G D V+KR+ + ++ + ++ L W + +L
Sbjct: 52 EIWNVIVG---RDGDRDSEDDVFKRLSSDEICKRVNLSDGLVHKLLHRFRDDWRSALGIL 108
Query: 283 SEMENGRC-KPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSK 341
E+ + K + Y + K++++M E + K+ T L T+ + +
Sbjct: 109 KWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVT----LNTVAKIMRR 164
Query: 342 FDFLAEAEHA---FLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLS 398
F E E A F + G+ + ++N +L ++K V + +L +S T +
Sbjct: 165 FAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL-LQLKSHITPN 223
Query: 399 LPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILN 458
+N ++ + ++ ++E+ G P +ISY +I YC+ + + +L+
Sbjct: 224 AHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLS 283
Query: 459 EMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLH 518
EM+ P+ +TY T +++ A F EA+ V M + GCKPD YN ++ +
Sbjct: 284 EMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAG 343
Query: 519 LREEA 523
EEA
Sbjct: 344 RLEEA 348
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 71/128 (55%), Gaps = 2/128 (1%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
ML +M++ G P+ T+ T++S A +EEAL + +K +G +PD + YN L+
Sbjct: 281 MLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLA 340
Query: 61 KSRRPKEAMEVLK-QMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHI-KPD 118
++ R +EA V + +M G + TY S+I+ Y ++A+EL +M ++ PD
Sbjct: 341 RAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPD 400
Query: 119 VYTYTTLL 126
V+TY LL
Sbjct: 401 VHTYQPLL 408
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/382 (19%), Positives = 148/382 (38%), Gaps = 37/382 (9%)
Query: 156 TFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEM 215
T +++ + G + E +F + + + N LL + + V ++
Sbjct: 157 TVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL 216
Query: 216 KRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLW 275
K + P TFN I + + ++A + M G P + +Y ++ + +
Sbjct: 217 K-SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEF 275
Query: 276 EQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTL 335
+ ++LSEME PN +TY++++ + KEFE+ +A + ++ L
Sbjct: 276 IKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCL 335
Query: 336 VLVNSKFDFLAEAEHAF-LEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESG 394
+ ++ L EAE F +E + G+ + +T N+M+++Y K ++LK M S
Sbjct: 336 IHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSN 395
Query: 395 FTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAK 454
PD+ +Y ++ + + G + E
Sbjct: 396 LC----------------------------------NPDVHTYQPLLRSCFKRGDVVEVG 421
Query: 455 RILNEMKDPAPVP-DVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDW 513
++L EM + D TY + +M A + + MI Q P T +++
Sbjct: 422 KLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEE 481
Query: 514 YCKLHLREEAYNFVHNLSSLDL 535
K ++ E A H + ++ L
Sbjct: 482 VKKKNMHESAERIEHIMKTVKL 503
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 146/296 (49%), Gaps = 4/296 (1%)
Query: 9 GLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEA 68
GL + + N L+ E+A + ++K + + P+ T+N + + K+ R +EA
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK-SHITPNAHTFNIFIHGWCKANRVEEA 243
Query: 69 MEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSG 128
+ +++M+ GF P +++YT++I Y + + E+ ++M P+ TYTT++S
Sbjct: 244 LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSS 303
Query: 129 FVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFK-EIKACQCSP 187
K+ E A+RV M+ +GCKP+ +N LI G E +VF+ E+ S
Sbjct: 304 LNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSI 363
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFV-PERETFNTLISAYSRCGSFDQARAV 246
+ T+N+++A++ + + + + KEM+ + P+ T+ L+ + + G + +
Sbjct: 364 NTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKL 423
Query: 247 YKRML-EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL 301
K M+ + ++ D STY ++ L R + E + + EM + P T LL
Sbjct: 424 LKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLL 479
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 144/319 (45%), Gaps = 7/319 (2%)
Query: 14 LCTFNTLISCCR--AGS-LYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAME 70
L T NT+ R AG+ +EEA+ +F+ + GL + + N LLD K +R ++A
Sbjct: 152 LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARV 211
Query: 71 VLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFV 130
VL Q++S P+ T+ I + + +EEAL +M +P V +YTT++ +
Sbjct: 212 VLLQLKSH-ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYC 270
Query: 131 NAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIV 190
+ + EM G PN T+ ++ + F E +V +K C PD +
Sbjct: 271 QQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSL 330
Query: 191 TWNTLLAVFGQNGLDSEVSGVFK-EMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKR 249
+N L+ + G E VF+ EM G T+N++I+ Y D+A + K
Sbjct: 331 FYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKE 390
Query: 250 MLEAGV-TPDLSTYNAVLAALARGGLWEQSEKVLSEM-ENGRCKPNEVTYSSLLHAYANG 307
M + + PD+ TY +L + + G + K+L EM +E TY+ L+
Sbjct: 391 MESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRA 450
Query: 308 KEFEKMNALAEEIYSGKIT 326
E L EE+ S IT
Sbjct: 451 NMCEWAYCLFEEMISQDIT 469
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 109/228 (47%), Gaps = 3/228 (1%)
Query: 2 LMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGK 61
+ +MK G P + ++ T+I C + + E+ E++ G P+ +TY ++
Sbjct: 247 IQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNA 306
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALEL-KNQMVEKHIKPDVY 120
+ +EA+ V +M+ G P + Y LI R G LEEA + + +M E + +
Sbjct: 307 QKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTS 366
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAG-CKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
TY ++++ + + +++ A+ + +EM ++ C P++ T+ L++ RG E+GK+ KE
Sbjct: 367 TYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKE 426
Query: 180 -IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERET 226
+ S D T+ L+ + + +F+EM P T
Sbjct: 427 MVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRT 474
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 153/370 (41%), Gaps = 42/370 (11%)
Query: 189 IVTWNTLLAV---FGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
+VT NT+ + F G E G+F + G E+ N L+ + +QAR
Sbjct: 152 LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARV 211
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYA 305
V + L++ +TP+ T+N + + E++ + EM+ +P ++Y++++ Y
Sbjct: 212 VLLQ-LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYC 270
Query: 306 NGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDIT 365
EF K+ ++ L+E E G P +
Sbjct: 271 QQFEFIKV----------------------------YEMLSEME-------ANGSPPNSI 295
Query: 366 TLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILR-E 424
T ++S +K + ++ M SG YN L++ +R ++E + R E
Sbjct: 296 TYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVE 355
Query: 425 ILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPV-PDVVTYNTFVATYAANS 483
+ E G+ + +YN +I YC + + +A +L EM+ PDV TY + +
Sbjct: 356 MPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRG 415
Query: 484 MFGEAIGVVQCMI-KQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEK 542
E +++ M+ K D++TY ++ C+ ++ E AY + S D+
Sbjct: 416 DVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTC 475
Query: 543 GRLLERIAEK 552
LLE + +K
Sbjct: 476 LLLLEEVKKK 485
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 132/305 (43%), Gaps = 14/305 (4%)
Query: 225 ETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARG--GLWEQSEKVL 282
E +N ++ R G D V+KR+ + ++ + ++ L W + +L
Sbjct: 52 EIWNVIVG---RDGDRDSEDDVFKRLSSDEICKRVNLSDGLVHKLLHRFRDDWRSALGIL 108
Query: 283 SEMENGRC-KPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSK 341
E+ + K + Y + K++++M E + K+ T L T+ + +
Sbjct: 109 KWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVT----LNTVAKIMRR 164
Query: 342 FDFLAEAEHA---FLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLS 398
F E E A F + G+ + ++N +L ++K V + +L +S T +
Sbjct: 165 FAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL-LQLKSHITPN 223
Query: 399 LPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILN 458
+N ++ + ++ ++E+ G P +ISY +I YC+ + + +L+
Sbjct: 224 AHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLS 283
Query: 459 EMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLH 518
EM+ P+ +TY T +++ A F EA+ V M + GCKPD YN ++ +
Sbjct: 284 EMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAG 343
Query: 519 LREEA 523
EEA
Sbjct: 344 RLEEA 348
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 71/128 (55%), Gaps = 2/128 (1%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
ML +M++ G P+ T+ T++S A +EEAL + +K +G +PD + YN L+
Sbjct: 281 MLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLA 340
Query: 61 KSRRPKEAMEVLK-QMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHI-KPD 118
++ R +EA V + +M G + TY S+I+ Y ++A+EL +M ++ PD
Sbjct: 341 RAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPD 400
Query: 119 VYTYTTLL 126
V+TY LL
Sbjct: 401 VHTYQPLL 408
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/382 (19%), Positives = 148/382 (38%), Gaps = 37/382 (9%)
Query: 156 TFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEM 215
T +++ + G + E +F + + + N LL + + V ++
Sbjct: 157 TVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL 216
Query: 216 KRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLW 275
K + P TFN I + + ++A + M G P + +Y ++ + +
Sbjct: 217 K-SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEF 275
Query: 276 EQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTL 335
+ ++LSEME PN +TY++++ + KEFE+ +A + ++ L
Sbjct: 276 IKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCL 335
Query: 336 VLVNSKFDFLAEAEHAF-LEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESG 394
+ ++ L EAE F +E + G+ + +T N+M+++Y K ++LK M S
Sbjct: 336 IHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSN 395
Query: 395 FTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAK 454
PD+ +Y ++ + + G + E
Sbjct: 396 LC----------------------------------NPDVHTYQPLLRSCFKRGDVVEVG 421
Query: 455 RILNEMKDPAPVP-DVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDW 513
++L EM + D TY + +M A + + MI Q P T +++
Sbjct: 422 KLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEE 481
Query: 514 YCKLHLREEAYNFVHNLSSLDL 535
K ++ E A H + ++ L
Sbjct: 482 VKKKNMHESAERIEHIMKTVKL 503
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 118/553 (21%), Positives = 237/553 (42%), Gaps = 94/553 (16%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDV--YGKSRRPKEAME 70
D+ +N +I+ C+ +E ++ELF E+ G+R D + +L + YG K+
Sbjct: 154 DVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLDFGKQVHS 213
Query: 71 VLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFV 130
++ + GF + +LI+ Y ++ +A L + + ++ V T+ ++ G
Sbjct: 214 LVIKA---GFFIASSVVNALITMYFNCQVVVDAC-LVFEETDVAVRDQV-TFNVVIDGLA 268
Query: 131 NAKKDELAMRVFEEMRTAGCKPNICTF--------------------------------N 158
K+DE ++ VF +M A +P TF N
Sbjct: 269 GFKRDE-SLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSN 327
Query: 159 ALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRA 218
A + MY F KVF+ ++ D+VTWNT+++ + Q L V+K M
Sbjct: 328 ATMTMYSSFEDFGAAHKVFESLE----EKDLVTWNTMISSYNQAKLGKSAMSVYKRMHII 383
Query: 219 GFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQS 278
G P+ TF +L++ D V +++ G++ + NA+++A ++ G E++
Sbjct: 384 GVKPDEFTFGSLLATSL---DLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKA 440
Query: 279 EKVLSEMENGRCKPNEVTYSSLLHA-YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVL 337
+ + + N +++++++ Y NG FE +
Sbjct: 441 DLLFER----SLRKNLISWNAIISGFYHNGFPFEGLE----------------------- 473
Query: 338 VNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESG-FT 396
+F L E+E R +P D TL+ +LS+ + ++ ++ G F
Sbjct: 474 ---RFSCLLESE-------VRILP-DAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFK 522
Query: 397 LSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRI 456
+L G N+L+ ++S+ + S + ++ EK D++S+N +I AY R+G+ A
Sbjct: 523 ETLIG-NALINMYSQCGTIQNSLEVFNQMSEK----DVVSWNSLISAYSRHGEGENAVNT 577
Query: 457 LNEMKDPAPV-PDVVTYNTFVATYAANSMFGEAIGVVQCMIK-QGCKPDQNTYNSIVDWY 514
M+D V PD T++ ++ + + E + + M++ G + + ++ +VD
Sbjct: 578 YKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLL 637
Query: 515 CKLHLREEAYNFV 527
+ +EA + V
Sbjct: 638 GRAGHLDEAESLV 650
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 113/482 (23%), Positives = 211/482 (43%), Gaps = 28/482 (5%)
Query: 33 ALELFEEI-KLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLI 91
AL+LF ++ + LRPD + + + R +V G +L+
Sbjct: 40 ALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLL 99
Query: 92 SAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCK 151
S Y R G L LK + E +PDVY++TTLLS E A VF++M +
Sbjct: 100 SLYERLGNLAS---LKKKFDEID-EPDVYSWTTLLSASFKLGDIEYAFEVFDKMPE---R 152
Query: 152 PNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGV 211
++ +NA+I + G ++F+E+ D + T+L++ LD V
Sbjct: 153 DDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLDFG-KQV 211
Query: 212 FKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALAR 271
+ +AGF N LI+ Y C A V++ A D T+N V+ LA
Sbjct: 212 HSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVA--VRDQVTFNVVIDGLA- 268
Query: 272 GGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVL 331
G ++S V +M +P ++T+ S++ + + +++ LA I +G V
Sbjct: 269 GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLA--IKTGYEKYTLVS 326
Query: 332 LKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMY 391
T+ + +S DF A A F +++ D+ T N M+S Y + KL + K M+
Sbjct: 327 NATMTMYSSFEDFGA-AHKVFESLEEK----DLVTWNTMISSYNQAKLGKSAMSVYKRMH 381
Query: 392 ESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMT 451
G + SL+ + + + EM+ I++ G+ + N +I AY +NG++
Sbjct: 382 IIGVKPDEFTFGSLL---ATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIE 438
Query: 452 EAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCK--PDQNTYNS 509
+A + + + +++++N ++ + N E + C+++ + PD T ++
Sbjct: 439 KADLLF----ERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLST 494
Query: 510 IV 511
++
Sbjct: 495 LL 496
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 153/365 (41%), Gaps = 79/365 (21%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALL------DV-------- 58
DL T+NT+IS L + A+ +++ + + G++PD T+ +LL DV
Sbjct: 353 DLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACI 412
Query: 59 --YGKSRRPKEAMEVLK------QMES------RGFPPSIVTYTSLISAYVRDGLLEEAL 104
+G S + + + ++ Q+E R +++++ ++IS + +G E L
Sbjct: 413 IKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGL 472
Query: 105 ELKNQMVEKHIK--PDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIK 162
E + ++E ++ PD YT +TLLS V+ L + + G NALI
Sbjct: 473 ERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALIN 532
Query: 163 MYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAG-FV 221
MY G +VF ++ D+V+WN+L++ + ++G +K M+ G +
Sbjct: 533 MYSQCGTIQNSLEVFNQMS----EKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVI 588
Query: 222 PERETFNTLISAYS------------------------------------RCGSFDQARA 245
P+ TF+ ++SA S R G D+A +
Sbjct: 589 PDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAES 648
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGG---LWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
+ K + E + + + A+ +A A G L + K+L E E K + Y L +
Sbjct: 649 LVK-ISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKE----KDDPSVYVQLSN 703
Query: 303 AYANG 307
YA
Sbjct: 704 IYAGA 708
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/462 (24%), Positives = 202/462 (43%), Gaps = 25/462 (5%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYN-ALLDVYGKS 62
+M G+ P+L T +++S C L E + L P+ + + AL+++Y +
Sbjct: 293 EMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAEC 352
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
+ + VL+ + R +IV + SLIS Y G++ +AL L QMV + IKPD +T
Sbjct: 353 GKLSDCETVLRVVSDR----NIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTL 408
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
+ +S NA L ++ + N+LI MY G VF +IK
Sbjct: 409 ASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQ-NSLIDMYSKSGSVDSASTVFNQIK- 466
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
+VTWN++L F QNG E +F M + TF +I A S GS ++
Sbjct: 467 ---HRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEK 523
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
+ V+ +++ +G+ DL T A++ A+ G +E V M + V++SS+++
Sbjct: 524 GKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAAETVFRAMS----SRSIVSWSSMIN 578
Query: 303 AYA-NGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIP 361
AY +G+ ++ + + SG V + L + E ++ F K G+
Sbjct: 579 AYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGS-VEEGKYYFNLMKSFGVS 637
Query: 362 HDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMI 421
+ + L R + + + +K E F + SL+ + R +K ++I
Sbjct: 638 PNSEHFACFIDLLSRSGDLKEAYRTIK---EMPFLADASVWGSLV---NGCRIHQKMDII 691
Query: 422 --LREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMK 461
++ L + D Y ++ Y G+ E +R+ + MK
Sbjct: 692 KAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMK 733
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 107/550 (19%), Positives = 234/550 (42%), Gaps = 52/550 (9%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVL 72
DL ++TL+S C +AL +F+ + G+ PD VT ++++ + + A V
Sbjct: 166 DLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVH 225
Query: 73 KQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNA 132
Q+ + F SL++ Y + G L + ++ EK K + ++T ++S +
Sbjct: 226 GQITRKMFDLDETLCNSLLTMYSKCGDLLSS----ERIFEKIAKKNAVSWTAMISSYNRG 281
Query: 133 KKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRG------------------------ 168
+ E A+R F EM +G +PN+ T +++ G G
Sbjct: 282 EFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESL 341
Query: 169 ------MFAEMGKVFKEIKACQCSPD--IVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGF 220
++AE GK+ + D IV WN+L++++ G+ + G+F++M
Sbjct: 342 SLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRI 401
Query: 221 VPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEK 280
P+ T + ISA G + ++ ++ V+ + N+++ ++ G + +
Sbjct: 402 KPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSAST 460
Query: 281 VLSEMENGRCKPNEVTYSSLLHAYA-NGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVN 339
V +++++ + VT++S+L ++ NG E + +L + +Y + + V ++
Sbjct: 461 VFNQIKH----RSVVTWNSMLCGFSQNGNSVEAI-SLFDYMYHSYLEMNEVTFLAVIQAC 515
Query: 340 SKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSL 399
S L + + + G+ D+ T A++ +Y + + + + M
Sbjct: 516 SSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWS 574
Query: 400 PGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNE 459
N+ +H R + + +++E G +P+ + + V+ A +G + E K N
Sbjct: 575 SMINAYG-MHGRIGSAIST---FNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNL 630
Query: 460 MKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHL 519
MK P+ + F+ + + EA ++ M D + + S+V+ C++H
Sbjct: 631 MKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEM---PFLADASVWGSLVNG-CRIHQ 686
Query: 520 REEAYNFVHN 529
+ + + N
Sbjct: 687 KMDIIKAIKN 696
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 167/398 (41%), Gaps = 51/398 (12%)
Query: 117 PDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKM-YGDRGMFAEMGK 175
PD + Y L+ V + A+ ++ + + + + F ++++ G R + GK
Sbjct: 63 PDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGK 122
Query: 176 VFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERE--TFNTLISA 233
V I D V +LL ++GQ G S+ VF M P R+ ++TL+S+
Sbjct: 123 VHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGM------PVRDLVAWSTLVSS 176
Query: 234 YSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPN 293
G +A ++K M++ GV PD T +V+ A G + V ++ +
Sbjct: 177 CLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLD 236
Query: 294 EVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFL 353
E +SLL Y+ + +E I+ +AV ++ ++ +F +A +F
Sbjct: 237 ETLCNSLLTMYSKCGDLLS----SERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFS 292
Query: 354 EFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTR 413
E K GI ++ TL ++LS G L+ + + F P Y SL
Sbjct: 293 EMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELD---PNYESL-------- 341
Query: 414 NFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYN 473
+ L E +YA C GK+++ + +L + D ++V +N
Sbjct: 342 -----SLALVE----------------LYAEC--GKLSDCETVLRVVSD----RNIVAWN 374
Query: 474 TFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
+ ++ YA M +A+G+ + M+ Q KPD T S +
Sbjct: 375 SLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSI 412
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 133/288 (46%), Gaps = 16/288 (5%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDM---VTYNALLD 57
+ M +Q + PD T + IS C L + L ++I +R D+ N+L+D
Sbjct: 392 LFRQMVTQRIKPDAFTLASSISACENAGL----VPLGKQIHGHVIRTDVSDEFVQNSLID 447
Query: 58 VYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKP 117
+Y KS A V Q++ R S+VT+ S++ + ++G EA+ L + M +++
Sbjct: 448 MYSKSGSVDSASTVFNQIKHR----SVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEM 503
Query: 118 DVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVF 177
+ T+ ++ + E V ++ +G K ++ T ALI MY G VF
Sbjct: 504 NEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVF 562
Query: 178 KEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 237
+ + + IV+W++++ +G +G F +M +G P F ++SA
Sbjct: 563 RAMSS----RSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHS 618
Query: 238 GSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM 285
GS ++ + + M GV+P+ + + L+R G +++ + + EM
Sbjct: 619 GSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEM 666
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 75/146 (51%), Gaps = 16/146 (10%)
Query: 367 LNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREIL 426
L+A + LY R LV++T +I KF++ S + G + + + I+
Sbjct: 81 LDAAIDLYHR--LVSETTQISKFVFPSVLR-ACAGSREHLSVGGKVHG---------RII 128
Query: 427 EKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFG 486
+ G++ D + ++ Y + G +++A+++ + M PV D+V ++T V++ N
Sbjct: 129 KGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGM----PVRDLVAWSTLVSSCLENGEVV 184
Query: 487 EAIGVVQCMIKQGCKPDQNTYNSIVD 512
+A+ + +CM+ G +PD T S+V+
Sbjct: 185 KALRMFKCMVDDGVEPDAVTMISVVE 210
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 165/392 (42%), Gaps = 55/392 (14%)
Query: 10 LAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAM 69
L PD F+ L+ C + ++ ++ D V ++L+D+Y K A
Sbjct: 101 LRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAK 160
Query: 70 EVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGF 129
V + + + +++T+++S Y + G EEALEL + K ++Y++T L+SGF
Sbjct: 161 AVFDSIRVK----NTISWTAMVSGYAKSGRKEEALELFRILPVK----NLYSWTALISGF 212
Query: 130 VNAKKDELAMRVFEEMR--------------TAGCKPNI--------------------C 155
V + K A VF EMR G N+ C
Sbjct: 213 VQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSC 272
Query: 156 TF--NALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFK 213
F NALI MY +F ++ D+V+W +L+ Q+G + ++
Sbjct: 273 VFISNALIDMYAKCSDVIAAKDIFSRMR----HRDVVSWTSLIVGMAQHGQAEKALALYD 328
Query: 214 EMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRML-EAGVTPDLSTYNAVLAALARG 272
+M G P TF LI A S G ++ R +++ M + G+ P L Y +L L R
Sbjct: 329 DMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRS 388
Query: 273 GLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSG---KITTHA 329
GL +++E ++ M P+E T+++LL A + +A+ + S K +
Sbjct: 389 GLLDEAENLIHTMP---FPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTY 445
Query: 330 VLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIP 361
+LL + S + ++EA E + R P
Sbjct: 446 ILLSNIYASASLWGKVSEARRKLGEMEVRKDP 477
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/469 (17%), Positives = 171/469 (36%), Gaps = 84/469 (17%)
Query: 53 NALLDVYGKSRRPKEAMEVLKQMESRG--------------------------------F 80
N L++VYGK A++V +M R
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 101
Query: 81 PPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMR 140
P +++L+ A G ++ ++ + D ++L+ + A
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKA 161
Query: 141 VFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFG 200
VF+ +R N ++ A++ Y G E ++F+ + ++ +W L++ F
Sbjct: 162 VFDSIRV----KNTISWTAMVSGYAKSGRKEEALELFRILPV----KNLYSWTALISGFV 213
Query: 201 QNGLDSEVSGVFKEMKRAGF-VPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDL 259
Q+G E VF EM+R + + ++++ A + + R V+ ++ G +
Sbjct: 214 QSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCV 273
Query: 260 STYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEE 319
NA++ A+ ++ + S M + + V+++SL+ A + EK AL ++
Sbjct: 274 FISNALIDMYAKCSDVIAAKDIFSRMRH----RDVVSWTSLIVGMAQHGQAEKALALYDD 329
Query: 320 IYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKR-GIPHDITTLNAMLSLYGRKK 378
+ S + + V L+ S F+ + F K GI + +L L GR
Sbjct: 330 MVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSG 389
Query: 379 LVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYN 438
L+ + ++ T+ P PD ++
Sbjct: 390 LLDEAENLIH-------TMPFP-------------------------------PDEPTWA 411
Query: 439 IVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGE 487
++ A R G+ RI + + + D TY YA+ S++G+
Sbjct: 412 ALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGK 460
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/378 (19%), Positives = 157/378 (41%), Gaps = 23/378 (6%)
Query: 158 NALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSE-VSGVFKEMK 216
N L+ +YG G + +VF E+ D + W ++L Q L + +S
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMP----HRDHIAWASVLTALNQANLSGKTLSVFSSVGS 97
Query: 217 RAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWE 276
+G P+ F+ L+ A + GS D R V+ + + D ++++ A+ GL
Sbjct: 98 SSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLN 157
Query: 277 QSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLV 336
++ V + R K N +++++++ YA E+ L + + + L+ V
Sbjct: 158 SAKAVFDSI---RVK-NTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFV 213
Query: 337 LVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKT---NKILKFMYES 393
EA F E ++ + DI + S+ G +A + ++ +
Sbjct: 214 QSGKGL----EAFSVFTEMRRERV--DILDPLVLSSIVGACANLAASIAGRQVHGLVIAL 267
Query: 394 GFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEA 453
GF + N+L+ ++++ + + ++I + D++S+ +I ++G+ +A
Sbjct: 268 GFDSCVFISNALIDMYAKCSDV----IAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKA 323
Query: 454 KRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQ-GCKPDQNTYNSIVD 512
+ ++M P+ VT+ + + + + Q M K G +P Y ++D
Sbjct: 324 LALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLD 383
Query: 513 WYCKLHLREEAYNFVHNL 530
+ L +EA N +H +
Sbjct: 384 LLGRSGLLDEAENLIHTM 401
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 169/366 (46%), Gaps = 22/366 (6%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
D+ + + P++ N+L++ Y L++++ +++ + DM +YN LL +
Sbjct: 292 DLLKENIKPNIYVINSLMNVNSHDLGY--TLKVYKNMQILDVTADMTSYNILLKTCCLAG 349
Query: 64 RPKEAMEVLKQ---MESRGFPP-SIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
R A ++ K+ MES G TY ++I + + + AL++K+ M + P+
Sbjct: 350 RVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNT 409
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
+T+++L+S NA E A +FEEM +GC+PN FN L+ + + ++F+
Sbjct: 410 HTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQS 469
Query: 180 IKACQC-----SPDIVTWNTLLA--VFGQNGLDSEV-----SGVFKEMKRAGFVPERETF 227
K + DIV+ + + NG S V S + KR F P T+
Sbjct: 470 WKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATY 529
Query: 228 NTLISAYSRCGS-FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEME 286
N L+ A CG+ + + + + M G++P+ T++ ++ G E + ++L M
Sbjct: 530 NILLKA---CGTDYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMH 586
Query: 287 NGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLA 346
+ +P+ V Y++ + A K + +L EE+ +I + V TL+ SK+ L
Sbjct: 587 SAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLL 646
Query: 347 EAEHAF 352
E
Sbjct: 647 EVRQCL 652
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 181/404 (44%), Gaps = 31/404 (7%)
Query: 141 VFEEMRTAGCKPNICTFNALIKMYG-DRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVF 199
++E++ KPNI N+L+ + D G KV+K ++ + D+ ++N LL
Sbjct: 289 IYEDLLKENIKPNIYVINSLMNVNSHDLGYTL---KVYKNMQILDVTADMTSYNILLKTC 345
Query: 200 GQNGLDSEVSGVFKEMKR---AGFVP-ERETFNTLISAYSRCGSFDQARAVYKRMLEAGV 255
G ++KE KR +G + + T+ T+I ++ + A V M GV
Sbjct: 346 CLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGV 405
Query: 256 TPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFE---- 311
TP+ T++++++A A GL EQ+ + EM C+PN ++ LLHA +++
Sbjct: 406 TPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFR 465
Query: 312 -----KMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAE--AEHAFLEFKKRGIPHDI 364
K +++ E +Y+ I + +L N+ L + +++ KR
Sbjct: 466 LFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPT 525
Query: 365 T-TLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILR 423
T T N +L G K +++ M G + + +++L+ + + + + ILR
Sbjct: 526 TATYNILLKACGTDYYRGK--ELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILR 583
Query: 424 EILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANS 483
+ G PD+++Y I N + A + EM+ P+ VTYNT + A S
Sbjct: 584 TMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLL---KARS 640
Query: 484 MFGEAIGVVQC------MIKQGCKPDQNTYNSIVDWYCKLHLRE 521
+G + V QC M G KP+ + +++ +C+ ++E
Sbjct: 641 KYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWCEGVIQE 684
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 162/360 (45%), Gaps = 37/360 (10%)
Query: 4 DMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKL---AGL-RPDMVTYNALLDV 58
+M+ + D+ ++N L+ +CC AG + + A ++++E K +GL + D TY ++ V
Sbjct: 325 NMQILDVTADMTSYNILLKTCCLAGRV-DLAQDIYKEAKRMESSGLLKLDAFTYCTIIKV 383
Query: 59 YGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPD 118
+ ++ K A++V M+S G P+ T++SLISA GL+E+A L +M+ +P+
Sbjct: 384 FADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPN 443
Query: 119 VYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC----------------KPNICTFNALIK 162
+ LL V A + + A R+F+ + + PNI N
Sbjct: 444 SQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNG--- 500
Query: 163 MYGDRGMFAEMGKVFKEIKACQ--C-SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAG 219
G I+A + C P T+N LL G + + + EMK G
Sbjct: 501 ----PGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGTDYYRGK--ELMDEMKSLG 554
Query: 220 FVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSE 279
P + T++TLI G + A + + M AG PD+ Y + A + +
Sbjct: 555 LSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAF 614
Query: 280 KVLSEMENGRCKPNEVTYSSLLHA---YANGKEFEKMNALAEEIYSGKITTHAVLLKTLV 336
+ EM + KPN VTY++LL A Y + E + A+ +++ + + LK L+
Sbjct: 615 SLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELI 674
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 136/307 (44%), Gaps = 33/307 (10%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
DMKS G+ P+ T+++LIS C L E+A LFEE+ +G P+ +N LL ++
Sbjct: 399 DMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEAC 458
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQ----MVEKH----- 114
+ A + + + S+ Y I V G LKN +V ++
Sbjct: 459 QYDRAFRLFQSWKGSSVNESL--YADDI---VSKGRTSSPNILKNNGPGSLVNRNSNSPY 513
Query: 115 --------IKPDVYTYTTLLS--GFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMY 164
KP TY LL G + EL +EM++ G PN T++ LI M
Sbjct: 514 IQASKRFCFKPTTATYNILLKACGTDYYRGKEL----MDEMKSLGLSPNQITWSTLIDMC 569
Query: 165 GDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPER 224
G G ++ + + + PD+V + T + + +N +F+EM+R P
Sbjct: 570 GGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNW 629
Query: 225 ETFNTLISAYSRCGSFDQAR---AVYKRMLEAGVTPDLSTYNAVLAALARGGLWE--QSE 279
T+NTL+ A S+ GS + R A+Y+ M AG P+ ++ G + E QS+
Sbjct: 630 VTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWCEGVIQENGQSQ 689
Query: 280 KVLSEME 286
+S+ E
Sbjct: 690 DKISDQE 696
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 172/406 (42%), Gaps = 26/406 (6%)
Query: 125 LLSGFVNAKKDELA--MRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
++ GF KK ++ M +E + PN+ +I + G G + + +++++
Sbjct: 238 IIHGF--GKKGDMVSVMTAYEACKQILDTPNMYICRTMIDVCGLCGDYVKSRYIYEDLLK 295
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVS-GVFKEMKRAGFVPERETFNTLISAYSRCGSFD 241
P+I N+L+ V N D + V+K M+ + ++N L+ G D
Sbjct: 296 ENIKPNIYVINSLMNV---NSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVD 352
Query: 242 QARAVY---KRMLEAGVTP-DLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTY 297
A+ +Y KRM +G+ D TY ++ A +W+ + KV +M++ PN T+
Sbjct: 353 LAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTW 412
Query: 298 SSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKK 357
SSL+ A AN E+ N L EE+ + ++ L+ + A F +K
Sbjct: 413 SSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKG 472
Query: 358 RGIPHDI----------TTLNAMLSLYGRKKLVAKTNKILKFMYESGFTL--SLPGYNSL 405
+ + T+ +L G LV + + F + YN L
Sbjct: 473 SSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNIL 532
Query: 406 MYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAP 465
L + ++ + + ++ E+ G+ P+ I+++ +I +G + A RIL M
Sbjct: 533 --LKACGTDYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGT 590
Query: 466 VPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
PDVV Y T + A N A + + M + KP+ TYN+++
Sbjct: 591 RPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLL 636
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDV-- 58
+L M S G PD+ + T I C + A LFEE++ ++P+ VTYN LL
Sbjct: 581 ILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARS 640
Query: 59 -YGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEK 113
YG ++ + + + M + G+ P+ LI + +G+++E + ++++ ++
Sbjct: 641 KYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWC-EGVIQENGQSQDKISDQ 695
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 28/291 (9%)
Query: 18 NTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMES 77
N+L+S ++EA +FE++ D+V++NALL Y S EA + K+M+
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMPA----KDLVSWNALLSGYVSSGHIGEAKLIFKEMKE 379
Query: 78 RGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT------TLLSGFVN 131
+ +I+++ +IS +G EE L+L + M + +P Y ++ +L + N
Sbjct: 380 K----NILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCN 435
Query: 132 AKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVT 191
++ ++ G ++ NALI MY G+ E +VF+ + D V+
Sbjct: 436 GQQ------YHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCL----DSVS 485
Query: 192 WNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRML 251
WN L+A GQ+G +E V++EM + G P+R T T+++A S G DQ R + M
Sbjct: 486 WNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSME 545
Query: 252 EA-GVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL 301
+ P Y ++ L R G + +E V+ + KP + +LL
Sbjct: 546 TVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLP---FKPTAEIWEALL 593
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 117/519 (22%), Positives = 221/519 (42%), Gaps = 53/519 (10%)
Query: 9 GLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKE 67
G P N LI C++ L A +LF+EI PD + ++ Y S
Sbjct: 44 GFQPRAHILNRLIDVYCKSSEL-NYARQLFDEIS----EPDKIARTTMVSGYCASGDITL 98
Query: 68 AMEVLKQMESRGFPPSI---VTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
A V ++ P + V Y ++I+ + + A+ L +M + KPD +T+ +
Sbjct: 99 ARGVFEKA-----PVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFAS 153
Query: 125 LLSGFVNAKKDELAMRVFEEMR-TAGCKPNICTFNALIKMYG----DRGMFAEMGKVFKE 179
+L+G DE F +G NAL+ +Y + KVF E
Sbjct: 154 VLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDE 213
Query: 180 IKACQCSPDIVTWNTLLAVFGQNG---LDSEV-SGVFKEMKRAGFVPERETFNTLISAYS 235
I D +W T++ + +NG L E+ G+ MK +N +IS Y
Sbjct: 214 I----LEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLV-------AYNAMISGYV 262
Query: 236 RCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEV 295
G + +A + +RM+ +G+ D TY +V+ A A GL + ++V + + + +
Sbjct: 263 NRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV----LRREDF 318
Query: 296 TY---SSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAF 352
++ +SL+ Y +F++ A+ E++ + + + LL V + EA+ F
Sbjct: 319 SFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGH----IGEAKLIF 374
Query: 353 LEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRT 412
E K++ +I + M+S + K+ M GF ++ + +
Sbjct: 375 KEMKEK----NILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVL 430
Query: 413 RNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTY 472
+ + ++L+ G + L + N +I Y + G + EA+++ M P D V++
Sbjct: 431 GAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTM----PCLDSVSW 486
Query: 473 NTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
N +A + EA+ V + M+K+G +PD+ T +++
Sbjct: 487 NALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVL 525
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 111/528 (21%), Positives = 228/528 (43%), Gaps = 62/528 (11%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG-KSRRPKEAMEV 71
D +N +I+ + A+ LF ++K G +PD T+ ++L + K+ ++
Sbjct: 112 DTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQF 171
Query: 72 LKQMESRGFPPSIVTYTSLISAYVR----DGLLEEALELKNQMVEKHIKPDVYTYTTLLS 127
G +L+S Y + LL A ++ ++++EK D ++TT+++
Sbjct: 172 HAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEK----DERSWTTMMT 227
Query: 128 GFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSP 187
G+V +L + E M + +NA+I Y +RG + E ++ + + +
Sbjct: 228 GYVKNGYFDLGEELLEGMDD---NMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIEL 284
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETF-----NTLISAYSRCGSFDQ 242
D T+ +++ GL V +V RE F N+L+S Y +CG FD+
Sbjct: 285 DEFTYPSVIRACATAGLLQLGKQVH------AYVLRREDFSFHFDNSLVSLYYKCGKFDE 338
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
ARA++++M DL ++NA+L+ G +++ + EM+ + N +++ ++
Sbjct: 339 ARAIFEKM----PAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK----EKNILSWMIMIS 390
Query: 303 AYA-NG------KEFEKMNALAEE----IYSGKITTHAVLLKTLVLVNSKFDFLAEAEHA 351
A NG K F M E +SG I + AVL +
Sbjct: 391 GLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVL-----------GAYCNGQQY 439
Query: 352 FLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSR 411
+ K G ++ NA++++Y + +V + ++ + M L +N+L+ +
Sbjct: 440 HAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP----CLDSVSWNALIAALGQ 495
Query: 412 TRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVT 471
+ ++ + E+L+KGI PD I+ V+ A G + + ++ + M+ +P
Sbjct: 496 HGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGAD 555
Query: 472 -YNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLH 518
Y + + F +A V++ + KP + +++ C++H
Sbjct: 556 HYARLIDLLCRSGKFSDAESVIESL---PFKPTAEIWEALLSG-CRVH 599
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 15/260 (5%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
MK +G P F+ I C Y + ++ G + NAL+ +Y K
Sbjct: 408 MKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGV 467
Query: 65 PKEAMEVLKQMESRGFPPSI--VTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
+EA +V + M P + V++ +LI+A + G EA+++ +M++K I+PD T
Sbjct: 468 VEEARQVFRTM------PCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITL 521
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTA-GCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK 181
T+L+ +A + + F+ M T P + LI + G F++ V I+
Sbjct: 522 LTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESV---IE 578
Query: 182 ACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERE-TFNTLISAYSRCGSF 240
+ P W LL+ +G + E+ G+ K G +PE + T+ L + ++ G +
Sbjct: 579 SLPFKPTAEIWEALLSGCRVHG-NMEL-GIIAADKLFGLIPEHDGTYMLLSNMHAATGQW 636
Query: 241 DQARAVYKRMLEAGVTPDLS 260
++ V K M + GV +++
Sbjct: 637 EEVARVRKLMRDRGVKKEVA 656
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 202/452 (44%), Gaps = 30/452 (6%)
Query: 17 FNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQME 76
F +L+ C + + + + I LR ++ + L+ +Y + A EV +M
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 77 SRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDE 136
R P + SLIS Y G E+A+ L QM E +KPD +T+ +L +
Sbjct: 155 KRDSSP--FAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQ 212
Query: 137 LAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLL 196
+ + ++ G ++ NAL+ MY G + VF I D V+WN++L
Sbjct: 213 IGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIP----HKDYVSWNSML 268
Query: 197 AVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVT 256
+ +GL E +F+ M + G P++ ++++ +R SF R ++ ++ G+
Sbjct: 269 TGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGME 325
Query: 257 PDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY---ANG-KEFEK 312
+LS NA++ ++ G Q+ + +M + + V++++++ A+ +NG K FE+
Sbjct: 326 WELSVANALIVLYSKRGQLGQACFIFDQM----LERDTVSWNAIISAHSKNSNGLKYFEQ 381
Query: 313 MNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAF-LEFKKRGIPHDITTLNAML 371
M + + +++ + + + + E F L K+ GI + M+
Sbjct: 382 M-------HRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMV 434
Query: 372 SLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIE 431
+LYGR ++ + ++ + E G + +L+Y N E+ + + E +E
Sbjct: 435 NLYGRAGMMEEAYSMI--VQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFE--LE 490
Query: 432 PD-LISYNIVIYAYCRNGKMTEAKRILNEMKD 462
PD ++ ++I Y + + + +R+ M D
Sbjct: 491 PDNEHNFELLIRIYSKAKRAEDVERVRQMMVD 522
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 138/307 (44%), Gaps = 18/307 (5%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ M G+ PD TF ++ C + + ++ G D+ NAL+ +Y
Sbjct: 182 LYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYA 241
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K +A V + + + V++ S+++ Y+ GLL EAL++ MV+ I+PD
Sbjct: 242 KCGDIVKARNVFDMIPHKDY----VSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKV 297
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
+++L+ ++ K ++ + G + + NALI +Y RG + +F ++
Sbjct: 298 AISSVLARVLSFKH---GRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQM 354
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
D V+WN +++ +N S F++M RA P+ TF +++S + G
Sbjct: 355 ----LERDTVSWNAIISAHSKN---SNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMV 407
Query: 241 DQARAVYKRML-EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSE---MENGRCKPNEVT 296
+ ++ M E G+ P + Y ++ R G+ E++ ++ + +E G +
Sbjct: 408 EDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALL 467
Query: 297 YSSLLHA 303
Y+ LH
Sbjct: 468 YACYLHG 474
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 136/284 (47%), Gaps = 10/284 (3%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M S ++P TF ++I C S + ++G D AL+ Y K
Sbjct: 98 MLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGD 157
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+ A +V +M + SIV + SL+S + ++GL +EA+++ QM E +PD T+ +
Sbjct: 158 MEGARQVFDRMPEK----SIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVS 213
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
LLS L V + + + G N+ ALI +Y G + +VF ++K
Sbjct: 214 LLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMK--- 270
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMK-RAGFVPERETFNTLISAYSRCGSFDQA 243
++ W +++ +G +G + +F +M+ G +P TF ++SA + G ++
Sbjct: 271 -ETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEG 329
Query: 244 RAVYKRMLEA-GVTPDLSTYNAVLAALARGGLWEQSEKVLSEME 286
R+VYKRM ++ + P + + ++ L R G +++ K + +++
Sbjct: 330 RSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLD 373
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 114/268 (42%), Gaps = 46/268 (17%)
Query: 82 PSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRV 141
P + S+I + + L + +M+ ++ P YT+T+++ + + V
Sbjct: 70 PDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGV 129
Query: 142 FEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQ 201
+G + AL+ Y G +VF + IV WN+L++ F Q
Sbjct: 130 HCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMP----EKSIVAWNSLVSGFEQ 185
Query: 202 NGLDSEVSGVFKEMKRAGFVPERETFNTLISA---------------------------- 233
NGL E VF +M+ +GF P+ TF +L+SA
Sbjct: 186 NGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKL 245
Query: 234 -------YSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEME 286
YSRCG +AR V+ +M E V + + A+++A G +Q+ ++ ++ME
Sbjct: 246 GTALINLYSRCGDVGKAREVFDKMKETNV----AAWTAMISAYGTHGYGQQAVELFNKME 301
Query: 287 NGRCK--PNEVTYSSLLHAYANGKEFEK 312
+ C PN VT+ ++L A A+ E+
Sbjct: 302 DD-CGPIPNNVTFVAVLSACAHAGLVEE 328
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 138/314 (43%), Gaps = 10/314 (3%)
Query: 221 VPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEK 280
+P+ FN++I + S+ A Y+RML + V+P T+ +V+ + A +
Sbjct: 69 LPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKG 128
Query: 281 VLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNS 340
V + ++L+ Y+ + E A +++ V +LV
Sbjct: 129 VHCHAVVSGFGLDTYVQAALVTFYSKCGDMEG----ARQVFDRMPEKSIVAWNSLVSGFE 184
Query: 341 KFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLP 400
+ EA F + ++ G D T ++LS + V+ + + +++ G L++
Sbjct: 185 QNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVK 244
Query: 401 GYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEM 460
+L+ L+SR + K+ RE+ +K E ++ ++ +I AY +G +A + N+M
Sbjct: 245 LGTALINLYSRCGDVGKA----REVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKM 300
Query: 461 KDP-APVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQ-GCKPDQNTYNSIVDWYCKLH 518
+D P+P+ VT+ ++ A + E V + M K P + +VD +
Sbjct: 301 EDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAG 360
Query: 519 LREEAYNFVHNLSS 532
+EAY F+H L +
Sbjct: 361 FLDEAYKFIHQLDA 374
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/434 (20%), Positives = 209/434 (48%), Gaps = 44/434 (10%)
Query: 24 CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPS 83
C+ G + EA +LF+ + D+VT+ ++ Y K +EA E+ +++SR +
Sbjct: 57 CKVGKI-AEARKLFDGLP----ERDVVTWTHVITGYIKLGDMREARELFDRVDSR---KN 108
Query: 84 IVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFE 143
+VT+T+++S Y+R L A L +M E+ +V ++ T++ G+ + + + A+ +F+
Sbjct: 109 VVTWTAMVSGYLRSKQLSIAEMLFQEMPER----NVVSWNTMIDGYAQSGRIDKALELFD 164
Query: 144 EMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNG 203
EM + NI ++N+++K RG E +F+ + D+V+W ++ +NG
Sbjct: 165 EM----PERNIVSWNSMVKALVQRGRIDEAMNLFERMP----RRDVVSWTAMVDGLAKNG 216
Query: 204 LDSEVSGVFKEMKRAGFVPERE--TFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLST 261
E +F M PER ++N +I+ Y++ D+A +++ M E D ++
Sbjct: 217 KVDEARRLFDCM------PERNIISWNAMITGYAQNNRIDEADQLFQVMPER----DFAS 266
Query: 262 YNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEK-MNALAEEI 320
+N ++ R ++ + M + N +++++++ Y KE E+ +N ++ +
Sbjct: 267 WNTMITGFIRNREMNKACGLFDRMP----EKNVISWTTMITGYVENKENEEALNVFSKML 322
Query: 321 YSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLV 380
G + + +++ S L E + K + +A+L++Y + +
Sbjct: 323 RDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGEL 382
Query: 381 AKTNKILKFMYESGFTL--SLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYN 438
K M+++G L +NS++ +++ + +++ + ++ + G +P ++Y
Sbjct: 383 IAARK----MFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYL 438
Query: 439 IVIYAYCRNGKMTE 452
+++A C + + E
Sbjct: 439 NLLFA-CSHAGLVE 451
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/471 (20%), Positives = 208/471 (44%), Gaps = 79/471 (16%)
Query: 52 YNALLDVYGKSRRPK---------EAMEVLKQMESR----GFPP-SIVTYTSLISAYVRD 97
+N + +Y S RP+ E +V K E+R G P +VT+T +I+ Y++
Sbjct: 31 FNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKL 90
Query: 98 GLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTF 157
G + EA EL +++ + +V T+T ++SG++ +K+ +A +F+EM + N+ ++
Sbjct: 91 GDMREARELFDRV---DSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEM----PERNVVSW 143
Query: 158 NALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKR 217
N +I Y G + ++F E+ +IV+WN+++ Q G E +F+ M R
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMP----ERNIVSWNSMVKALVQRGRIDEAMNLFERMPR 199
Query: 218 AGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQ 277
V ++ ++ ++ G D+AR ++ M E + ++NA++ A+ ++
Sbjct: 200 RDVV----SWTAMVDGLAKNGKVDEARRLFDCMPERNII----SWNAMITGYAQNNRIDE 251
Query: 278 SEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVL 337
++++ M + + ++++++ + +E K L
Sbjct: 252 ADQLFQVMP----ERDFASWNTMITGFIRNREMNKACGL--------------------- 286
Query: 338 VNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKT-NKILKFMYESGFT 396
FD + E ++ + M++ Y K + N K + +
Sbjct: 287 ----FDRMPE--------------KNVISWTTMITGYVENKENEEALNVFSKMLRDGSVK 328
Query: 397 LSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRI 456
++ Y S++ S + + I + I + + + I + ++ Y ++G++ A+++
Sbjct: 329 PNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKM 388
Query: 457 LNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTY 507
+ D++++N+ +A YA + EAI + M K G KP TY
Sbjct: 389 FD--NGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTY 437
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 132/281 (46%), Gaps = 50/281 (17%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVL 72
D+ ++ ++ +EA LF+ + +++++NA++ Y ++ R EA ++
Sbjct: 201 DVVSWTAMVDGLAKNGKVDEARRLFDCMP----ERNIISWNAMITGYAQNNRIDEADQLF 256
Query: 73 KQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNA 132
+ M R F ++ ++I+ ++R+ + +A L ++M EK +V ++TT+++G+V
Sbjct: 257 QVMPERDF----ASWNTMITGFIRNREMNKACGLFDRMPEK----NVISWTTMITGYVEN 308
Query: 133 KKDELAMRVFEEM-RTAGCKPNICTF---------------------------------- 157
K++E A+ VF +M R KPN+ T+
Sbjct: 309 KENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIV 368
Query: 158 -NALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMK 216
+AL+ MY G K+F CQ D+++WN+++AV+ +G E ++ +M+
Sbjct: 369 TSALLNMYSKSGELIAARKMFDNGLVCQ--RDLISWNSMIAVYAHHGHGKEAIEMYNQMR 426
Query: 217 RAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTP 257
+ GF P T+ L+ A S G ++ +K ++ P
Sbjct: 427 KHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLP 467
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 163/363 (44%), Gaps = 81/363 (22%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVL 72
++ T+ ++S G L + L + E + ++V++N ++D Y +S R +A+E+
Sbjct: 108 NVVTWTAMVS----GYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELF 163
Query: 73 KQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNA 132
+M R +IV++ S++ A V+ G ++EA+ L E+ + DV ++T ++ G
Sbjct: 164 DEMPER----NIVSWNSMVKALVQRGRIDEAMNL----FERMPRRDVVSWTAMVDGLAKN 215
Query: 133 KKDELAMRVFEEMRTAGCKP--NICTFNALIKMYGDRGMFAEMGKVFKEI---------- 180
K + A R+F+ C P NI ++NA+I Y E ++F+ +
Sbjct: 216 GKVDEARRLFD------CMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNT 269
Query: 181 ------------KACQC-----SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFV-P 222
KAC ++++W T++ + +N + E VF +M R G V P
Sbjct: 270 MITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKP 329
Query: 223 ERETFNTLISAYSRCGSFDQARAVY-------------------------------KRML 251
T+ +++SA S + + ++ ++M
Sbjct: 330 NVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMF 389
Query: 252 EAGVT--PDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKE 309
+ G+ DL ++N+++A A G +++ ++ ++M KP+ VTY +LL A ++
Sbjct: 390 DNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGL 449
Query: 310 FEK 312
EK
Sbjct: 450 VEK 452
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 119/261 (45%), Gaps = 43/261 (16%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVL 72
++ ++N +I+ + +EA +LF+ + D ++N ++ + ++R +A +
Sbjct: 232 NIISWNAMITGYAQNNRIDEADQLFQVMP----ERDFASWNTMITGFIRNREMNKACGLF 287
Query: 73 KQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMV-EKHIKPDVYTYTTLLS---- 127
+M + +++++T++I+ YV + EEAL + ++M+ + +KP+V TY ++LS
Sbjct: 288 DRMPEK----NVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSD 343
Query: 128 --GFVNAK------------KDELAMRVFEEMRTAG---------------CKPNICTFN 158
G V + K+E+ M + C+ ++ ++N
Sbjct: 344 LAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWN 403
Query: 159 ALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRA 218
++I +Y G E +++ +++ P VT+ LL GL + FK++ R
Sbjct: 404 SMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRD 463
Query: 219 GFVPERET-FNTLISAYSRCG 238
+P RE + L+ R G
Sbjct: 464 ESLPLREEHYTCLVDLCGRAG 484
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 7/115 (6%)
Query: 28 SLYEEALELFEEIKL--AGL--RPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPS 83
++Y ++ EL K+ GL + D++++N+++ VY KEA+E+ QM GF PS
Sbjct: 374 NMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPS 433
Query: 84 IVTYTSLISAYVRDGLLEEALELKNQMVEKHIKP---DVYTYTTLLSGFVNAKKD 135
VTY +L+ A GL+E+ +E +V P + YT L G KD
Sbjct: 434 AVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKD 488
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 71/143 (49%), Gaps = 6/143 (4%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
++ + P++ T+ +++S C + E ++ + I + + + + +ALL++Y KS
Sbjct: 322 LRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGE 381
Query: 65 PKEAMEVLKQMESRGF--PPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
A ++M G ++++ S+I+ Y G +EA+E+ NQM + KP TY
Sbjct: 382 LIAA----RKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTY 437
Query: 123 TTLLSGFVNAKKDELAMRVFEEM 145
LL +A E M F+++
Sbjct: 438 LNLLFACSHAGLVEKGMEFFKDL 460
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/464 (22%), Positives = 197/464 (42%), Gaps = 52/464 (11%)
Query: 32 EALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFP-PSIVTYTSL 90
+AL + L PD +N L+ Y +S P ++ V +M +GF P ++ +
Sbjct: 53 DALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFV 112
Query: 91 ISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGC 150
I A L ++ Q ++ ++ ++ TTL+ + E A +VF+EM
Sbjct: 113 IKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMH---- 168
Query: 151 KPNICTFNALI-------KMYGDRGMFAEM------------------------GKVFKE 179
+PN+ +NA+I + G R +F +M ++F E
Sbjct: 169 QPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSE 228
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+ D V+W+T++ NG +E F+E++RAG P + ++SA S+ GS
Sbjct: 229 MP----HRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGS 284
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
F+ + ++ + +AG + +S NA++ +R G + V M+ RC V+++S
Sbjct: 285 FEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCI---VSWTS 341
Query: 300 LLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKK-R 358
++ A + E+ L E+ + +T + +L+ S + E E F E K+
Sbjct: 342 MIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVY 401
Query: 359 GIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKS 418
I +I M+ LYGR K K F+ + + + +L+ S N +
Sbjct: 402 HIEPEIEHYGCMVDLYGRS---GKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELA 458
Query: 419 EMILREI--LEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEM 460
E + + + L+ DL+ ++ AY GK + I M
Sbjct: 459 EQVKQRLNELDPNNSGDLV---LLSNAYATAGKWKDVASIRKSM 499
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 136/310 (43%), Gaps = 19/310 (6%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV 71
P+L +N +I+ C G+ A E+F+++ L + ++N +L Y K+ + A +
Sbjct: 170 PNLVAWNAVITACFRGNDVAGAREIFDKM----LVRNHTSWNVMLAGYIKAGELESAKRI 225
Query: 72 LKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVN 131
+M R V+++++I +G E+ ++ + P+ + T +LS
Sbjct: 226 FSEMPHR----DDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQ 281
Query: 132 AKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVT 191
+ E + + AG + NALI MY G VF+ ++ +C IV+
Sbjct: 282 SGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRC---IVS 338
Query: 192 WNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRML 251
W +++A +G E +F EM G P+ +F +L+ A S G ++ + M
Sbjct: 339 WTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMK 398
Query: 252 EA-GVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEF 310
+ P++ Y ++ R G +++ + +M P + + +LL A ++
Sbjct: 399 RVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMP---IPPTAIVWRTLLGACSSHGNI 455
Query: 311 EKMNALAEEI 320
E LAE++
Sbjct: 456 E----LAEQV 461
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 155/382 (40%), Gaps = 52/382 (13%)
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFV-PERETF-------------- 227
C PD +NTL+ + ++ VF EM R GFV P+ +F
Sbjct: 64 CFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLR 123
Query: 228 ---------------------NTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVL 266
TLI Y CG + AR V+ M + P+L +NAV+
Sbjct: 124 TGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQ----PNLVAWNAVI 179
Query: 267 AALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKIT 326
A RG + ++ +M N +++ +L Y E E A+ I+S
Sbjct: 180 TACFRGNDVAGAREIFDKM----LVRNHTSWNVMLAGYIKAGELES----AKRIFSEMPH 231
Query: 327 THAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKI 386
V T+++ + E+ F E ++ G+ + +L +LS + +
Sbjct: 232 RDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKIL 291
Query: 387 LKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCR 446
F+ ++G++ + N+L+ ++SR N + ++ + EK ++S+ +I
Sbjct: 292 HGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRC---IVSWTSMIAGLAM 348
Query: 447 NGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIK-QGCKPDQN 505
+G+ EA R+ NEM PD +++ + + + + E M + +P+
Sbjct: 349 HGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIE 408
Query: 506 TYNSIVDWYCKLHLREEAYNFV 527
Y +VD Y + ++AY+F+
Sbjct: 409 HYGCMVDLYGRSGKLQKAYDFI 430
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 110/253 (43%), Gaps = 16/253 (6%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+++ G++P+ + ++S C +E L ++ AG + NAL+D+Y +
Sbjct: 259 ELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCG 318
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
A V + M+ + IV++TS+I+ G EEA+ L N+M + PD ++
Sbjct: 319 NVPMARLVFEGMQEK---RCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFI 375
Query: 124 TLLSGFVNAKKDELAMRVFEEM-RTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
+LL +A E F EM R +P I + ++ +YG G ++ K + I
Sbjct: 376 SLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSG---KLQKAYDFICQ 432
Query: 183 CQCSPDIVTWNTLLAVFGQNG---LDSEVSGVFKEMKRAGFVPERETFNTLIS-AYSRCG 238
P + W TLL +G L +V E+ P L+S AY+ G
Sbjct: 433 MPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELD-----PNNSGDLVLLSNAYATAG 487
Query: 239 SFDQARAVYKRML 251
+ ++ K M+
Sbjct: 488 KWKDVASIRKSMI 500
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 126/281 (44%), Gaps = 10/281 (3%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVL 72
D +++T+I + E+ F E++ AG+ P+ V+ +L +S + +
Sbjct: 233 DDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILH 292
Query: 73 KQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNA 132
+E G+ + +LI Y R G + A + M EK + ++T++++G
Sbjct: 293 GFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRC---IVSWTSMIAGLAMH 349
Query: 133 KKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC-QCSPDIVT 191
+ E A+R+F EM G P+ +F +L+ G+ E F E+K P+I
Sbjct: 350 GQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEH 409
Query: 192 WNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRML 251
+ ++ ++G++G ++ + + + P + TL+ A S G+ + A V +R+
Sbjct: 410 YGCMVDLYGRSG---KLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLN 466
Query: 252 EAGVTPDLSTYNAVLA-ALARGGLWEQSEKVLSEMENGRCK 291
E + P+ S +L+ A A G W+ + M R K
Sbjct: 467 E--LDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIK 505
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 124/282 (43%)
Query: 27 GSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVT 86
+L EA F + G++P + + LL + A E + + G PS T
Sbjct: 151 ANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKT 210
Query: 87 YTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMR 146
Y+ L+ + R A ++ ++M+E++ D+ Y LL + + ++F+EM
Sbjct: 211 YSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMG 270
Query: 147 TAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDS 206
G KP+ +F I Y D G KV +K P++ T+N ++ +N
Sbjct: 271 NLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVD 330
Query: 207 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVL 266
+ + EM + G P+ T+N++++ + ++A + RM PD TYN VL
Sbjct: 331 DAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVL 390
Query: 267 AALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGK 308
L R G ++++ ++ M + P TY+ ++H K
Sbjct: 391 KLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKK 432
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 85/169 (50%)
Query: 347 EAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLM 406
A+ F + K GI T + ++ + R + + K+ M E + L YN+L+
Sbjct: 191 HAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALL 250
Query: 407 YLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPV 466
++ + + +E+ G++PD S+ I I+AYC G + A ++L+ MK V
Sbjct: 251 DALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLV 310
Query: 467 PDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYC 515
P+V T+N + T N +A ++ MI++G PD TYNSI+ ++C
Sbjct: 311 PNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHC 359
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 129/331 (38%), Gaps = 36/331 (10%)
Query: 138 AMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLA 197
A R F M G KP + + L+ D+ K + Q
Sbjct: 157 ACRAFNRMVEFGIKPCVDDLDQLLHSLCDK----------KHVNHAQ------------- 193
Query: 198 VFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTP 257
F + K G VP +T++ L+ ++R AR V+ MLE
Sbjct: 194 ------------EFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVV 241
Query: 258 DLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALA 317
DL YNA+L AL + G + K+ EM N KP+ +++ +HAY + + +
Sbjct: 242 DLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVL 301
Query: 318 EEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRK 377
+ + + + ++ K + + +A E ++G D T N++++ +
Sbjct: 302 DRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDH 361
Query: 378 KLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISY 437
V + K+L M + YN ++ L R F ++ I + E+ P + +Y
Sbjct: 362 CEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATY 421
Query: 438 NIVIYAYCR-NGKMTEAKRILNEMKDPAPVP 467
++I+ R GK+ EA R M D P
Sbjct: 422 TVMIHGLVRKKGKLEEACRYFEMMIDEGIPP 452
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 115/249 (46%), Gaps = 3/249 (1%)
Query: 4 DMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKS 62
+M + DL +N L+ + C++G + + ++F+E+ GL+PD ++ + Y +
Sbjct: 233 EMLERNCVVDLLAYNALLDALCKSGDV-DGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDA 291
Query: 63 RRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTY 122
A +VL +M+ P++ T+ +I ++ +++A L ++M++K PD +TY
Sbjct: 292 GDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTY 351
Query: 123 TTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKA 182
++++ + + A ++ M C P+ T+N ++K+ G F ++++ +
Sbjct: 352 NSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSE 411
Query: 183 CQCSPDIVTWNTLL-AVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFD 241
+ P + T+ ++ + + G E F+ M G P T L + G D
Sbjct: 412 RKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMD 471
Query: 242 QARAVYKRM 250
+ +M
Sbjct: 472 VVDVLAGKM 480
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/287 (19%), Positives = 115/287 (40%)
Query: 225 ETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSE 284
+ F + AYSR +A + RM+E G+ P + + +L +L +++ +
Sbjct: 139 KVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGK 198
Query: 285 MENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDF 344
+ P+ TYS L+ +A ++ + +E+ + L+ K
Sbjct: 199 AKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGD 258
Query: 345 LAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNS 404
+ F E G+ D + + Y V K+L M ++ +N
Sbjct: 259 VDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNH 318
Query: 405 LMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPA 464
++ + + ++L E+++KG PD +YN ++ +C + ++ A ++L+ M
Sbjct: 319 IIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTK 378
Query: 465 PVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
+PD TYN + F A + + M ++ P TY ++
Sbjct: 379 CLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMI 425
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 84/177 (47%), Gaps = 7/177 (3%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
M +M + GL PD +F I C AG ++ A ++ + +K L P++ T+N ++
Sbjct: 265 MFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHS-AYKVLDRMKRYDLVPNVYTFNHIIKTL 323
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
K+ + +A +L +M +G P TY S+++ + + A +L ++M PD
Sbjct: 324 CKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDR 383
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKV 176
+TY +L + + + A ++E M P + T+ +I G+ + GK+
Sbjct: 384 HTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMI-----HGLVRKKGKL 435
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 81/185 (43%)
Query: 340 SKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSL 399
S+ + +EA AF + GI + L+ +L KK V + G S
Sbjct: 149 SRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSA 208
Query: 400 PGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNE 459
Y+ L+ +R R+ + + E+LE+ DL++YN ++ A C++G + ++ E
Sbjct: 209 KTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQE 268
Query: 460 MKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHL 519
M + PD ++ F+ Y A V+ M + P+ T+N I+ CK
Sbjct: 269 MGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEK 328
Query: 520 REEAY 524
++AY
Sbjct: 329 VDDAY 333
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 133/276 (48%), Gaps = 2/276 (0%)
Query: 5 MKSQGLAPDLCTFNTLISC-CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
M + PD+CTFN LI+ CR+ S ++ AL+LF E+K G P++V++N L+ + S
Sbjct: 219 MGKERAKPDVCTFNILINGYCRS-SKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSG 277
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
+ +E +++ +M G S T L+ R+G +++A L ++ K + P + Y
Sbjct: 278 KIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYG 337
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
+L+ K AM + EE+ G P L++ G + +++
Sbjct: 338 SLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNA 397
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
PD VT+N LL + ++ + + G+ P+ T++ L+S +++ G +
Sbjct: 398 GILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEG 457
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSE 279
+ ML+ + PD+ TYN ++ L+ G + + +
Sbjct: 458 EVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSRKQ 493
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 140/309 (45%), Gaps = 19/309 (6%)
Query: 52 YNALLDVYGKSRRPKEAMEVLKQMESR-GFPPSIVTYTSLISAYVRDGLLEEALELKNQM 110
+ + +D Y ++R+ A+ M+ P++ Y ++++ YV+ G +++AL +M
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 111 VEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMF 170
++ KPDV T+ L++G+ + K +LA+ +F EM+ GC+PN+ +FN LI+ + G
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKI 279
Query: 171 AEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTL 230
E K+ E+ C T L+ + G + G+ ++ +P + +L
Sbjct: 280 EEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSL 339
Query: 231 ISAYSRCGSFDQARA--VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENG 288
+ CG RA + + + + G TP ++ L + G E++ + +M N
Sbjct: 340 VEKL--CGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNA 397
Query: 289 RCKPNEVTYSSLLHAYANGKEFEKMNAL----AEEIYSGKITTHAVLLKTL--------- 335
P+ VT++ LL + N L + + Y TT+ VL+
Sbjct: 398 GILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEG 457
Query: 336 -VLVNSKFD 343
VLVN D
Sbjct: 458 EVLVNEMLD 466
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 153/304 (50%), Gaps = 6/304 (1%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEV 71
P++ +NT+++ ++AL ++ + +PD+ T+N L++ Y +S + A+++
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 72 LKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVN 131
++M+ +G P++V++ +LI ++ G +EE +++ +M+E + T L+ G
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 132 AKKDELAMRVFEEMRTAGCKPNICTFNALI-KMYGDRGMFAEMGKVFKEIKACQCSPDIV 190
+ + A + ++ P+ + +L+ K+ G+ M ++ +E+ +P +
Sbjct: 311 EGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAM-EMMEELWKKGQTPCFI 369
Query: 191 TWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRM 250
TL+ ++G + SG ++M AG +P+ TFN L+ C S A R+
Sbjct: 370 ACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDL--CSSDHSTDANRLRL 427
Query: 251 LEA--GVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGK 308
L + G PD +TY+ +++ + G ++ E +++EM + P+ TY+ L+ +
Sbjct: 428 LASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTG 487
Query: 309 EFEK 312
+F +
Sbjct: 488 KFSR 491
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 150/365 (41%), Gaps = 36/365 (9%)
Query: 122 YTTLLSGFVNAKKDELAMRVFEEM-RTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
+ + + + A+K + A+ F+ M R KPN+ +N ++ Y G + + ++ +
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ PD+ T+N L+ + ++ +F+EMK G P +FNTLI + G
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKI 279
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSL 300
++ + M+E G +T ++ L R G + + ++ ++ N R P+E Y SL
Sbjct: 280 EEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSL 339
Query: 301 LHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGI 360
+ + + + EE++ T + TLV K +A + GI
Sbjct: 340 VEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGI 399
Query: 361 PHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEM 420
D T N +L + L + + N L L S
Sbjct: 400 LPDSVTFNLLL-----RDLCSSDHST--------------DANRLRLLAS---------- 430
Query: 421 ILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYA 480
KG EPD +Y++++ + + G+ E + ++NEM D +PD+ TYN + +
Sbjct: 431 ------SKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLS 484
Query: 481 ANSMF 485
F
Sbjct: 485 CTGKF 489
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 155/370 (41%), Gaps = 38/370 (10%)
Query: 87 YTSLISAYVRDGLLEEALELKNQMVEKHI--KPDVYTYTTLLSGFVNAKKDELAMRVFEE 144
+ S I AY R ++ AL L +++ I KP+V Y T+++G+V + + A+R ++
Sbjct: 160 FRSAIDAYCRARKMDYAL-LAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQR 218
Query: 145 MRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGL 204
M KP++CTFN LI Y F +F+E+K C P++V++NTL+ F +G
Sbjct: 219 MGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGK 278
Query: 205 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNA 264
E + EM G T L+ R G D A + +L V P Y +
Sbjct: 279 IEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGS 338
Query: 265 VLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGK 324
++ L ++ +++ E+ P + ++L+ EK + E++ +
Sbjct: 339 LVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAG 398
Query: 325 ITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTN 384
I +V L+ D +A L +G D TT + ++
Sbjct: 399 ILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLV------------- 445
Query: 385 KILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAY 444
SGFT + ++ E+++ E+L+K + PD+ +YN ++
Sbjct: 446 --------SGFT--------------KEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGL 483
Query: 445 CRNGKMTEAK 454
GK + +
Sbjct: 484 SCTGKFSRKQ 493
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 153/346 (44%), Gaps = 12/346 (3%)
Query: 177 FKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG--------VFKEMKR-AGFVPERETF 227
F C CS I + L +F ++ +D+ F MKR P +
Sbjct: 138 FVAANPCPCSSGIFSCPELEPIF-RSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVY 196
Query: 228 NTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMEN 287
NT+++ Y + G D+A Y+RM + PD+ T+N ++ R ++ + + EM+
Sbjct: 197 NTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKE 256
Query: 288 GRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAE 347
C+PN V++++L+ + + + E+ +A E+ + LV + + +
Sbjct: 257 KGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDD 316
Query: 348 AEHAFLEF-KKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLM 406
A L+ KR +P + + + L G K V + ++++ +++ G T +L+
Sbjct: 317 ACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAV-RAMEMMEELWKKGQTPCFIACTTLV 375
Query: 407 YLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPV 466
++ K+ + +++ GI PD +++N+++ C + T+A R+
Sbjct: 376 EGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYE 435
Query: 467 PDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVD 512
PD TY+ V+ + E +V M+ + PD TYN ++D
Sbjct: 436 PDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMD 481
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 113/253 (44%), Gaps = 7/253 (2%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ +MK +G P++ +FNTLI + EE +++ E+ G R T L+D
Sbjct: 250 LFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLC 309
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
+ R +A ++ + ++ PS Y SL+ + A+E+ ++ +K P
Sbjct: 310 REGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFI 369
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIK--MYGDRGMFAEMGKVFK 178
TTL+ G + + E A E+M AG P+ TFN L++ D A ++
Sbjct: 370 ACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLA 429
Query: 179 EIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 238
K + PD T++ L++ F + G E + EM +P+ T+N L+ S G
Sbjct: 430 SSKGYE--PDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTG 487
Query: 239 SFDQARAVYKRML 251
F + + RML
Sbjct: 488 KFSRKQV---RML 497
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 81/149 (54%)
Query: 402 YNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMK 461
YN+++ + ++ + K+ + + ++ +PD+ ++NI+I YCR+ K A + EMK
Sbjct: 196 YNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMK 255
Query: 462 DPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLRE 521
+ P+VV++NT + + ++ E + + MI+ GC+ + T +VD C+ +
Sbjct: 256 EKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVD 315
Query: 522 EAYNFVHNLSSLDLHVSEEEKGRLLERIA 550
+A V +L + + SE + G L+E++
Sbjct: 316 DACGLVLDLLNKRVLPSEFDYGSLVEKLC 344
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%)
Query: 431 EPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIG 490
+P++ YN V+ Y ++G M +A R M PDV T+N + Y +S F A+
Sbjct: 190 KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALD 249
Query: 491 VVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSE 539
+ + M ++GC+P+ ++N+++ + EE + + L SE
Sbjct: 250 LFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSE 298
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 135/281 (48%), Gaps = 5/281 (1%)
Query: 10 LAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEA 68
+ PD TFN L CR ++A++L EE+ AG +P+ TY A +D + ++ EA
Sbjct: 264 VKPDANTFNVLFFGWCRVRDP-KKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEA 322
Query: 69 MEVLKQMESRGFP---PSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTL 125
++ M ++G P+ T+ +I A ++ EE EL +M+ PDV TY +
Sbjct: 323 ADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDV 382
Query: 126 LSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQC 185
+ G A+K + A + +EM G P+I T+N +++ + E K++ + +C
Sbjct: 383 IEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRC 442
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
+P + T+N L+++F + + EM + V + ET+ +I+ C +A
Sbjct: 443 APSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACF 502
Query: 246 VYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEME 286
+ + ++ G+ +++ L L+ G + KV M+
Sbjct: 503 LLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMK 543
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 121/262 (46%), Gaps = 6/262 (2%)
Query: 12 PDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAME 70
P++ FN L+ + C+ G L +E L ++ ++PD T+N L + + R PK+AM+
Sbjct: 232 PEINAFNMLLDALCKCG-LVKEGEALLRRMR-HRVKPDANTFNVLFFGWCRVRDPKKAMK 289
Query: 71 VLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKH---IKPDVYTYTTLLS 127
+L++M G P TY + I + + G+++EA +L + M+ K P T+ ++
Sbjct: 290 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIV 349
Query: 128 GFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSP 187
K E + M + GC P++ T+ +I+ E K E+ P
Sbjct: 350 ALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPP 409
Query: 188 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVY 247
DIVT+N L V +N E ++ M + P +T+N LIS + D A +
Sbjct: 410 DIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTW 469
Query: 248 KRMLEAGVTPDLSTYNAVLAAL 269
M + D+ TY A++ L
Sbjct: 470 TEMDKRDCVQDVETYCAMINGL 491
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 122/281 (43%), Gaps = 39/281 (13%)
Query: 248 KRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANG 307
++ + P+++ +N +L AL + GL ++ E +L M + R KP+ T++ L +
Sbjct: 223 RKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRH-RVKPDANTFNVLFFGWCRV 281
Query: 308 KEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTL 367
++ +K L EE + EA H P + T
Sbjct: 282 RDPKKAMKLLEE-------------------------MIEAGHK---------PENFTYC 307
Query: 368 NAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSL-MYLHSRTRNFRKSEM--ILRE 424
A + + + +V + + FM G +S P + + + + +N + E ++
Sbjct: 308 -AAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGR 366
Query: 425 ILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSM 484
++ G PD+ +Y VI C K+ EA + L+EM + PD+VTYN F+ N
Sbjct: 367 MISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRK 426
Query: 485 FGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYN 525
EA+ + M++ C P TYN ++ + ++ + A+N
Sbjct: 427 TDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFN 467
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 138/349 (39%), Gaps = 49/349 (14%)
Query: 82 PSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRV 141
P I + L+ A + GL++E L +M + +KPD T+ L G+ + + AM++
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKL 290
Query: 142 FEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQ 201
EEM AG KP T+ A I F Q
Sbjct: 291 LEEMIEAGHKPENFTYCAAID-----------------------------------TFCQ 315
Query: 202 NGLDSEVSGVFKEMKRAGFV---PERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPD 258
G+ E + +F M G P +TF +I A ++ ++ + RM+ G PD
Sbjct: 316 AGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPD 375
Query: 259 LSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAE 318
+STY V+ + +++ K L EM N P+ VTY+ L ++ ++ L
Sbjct: 376 VSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYG 435
Query: 319 EIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLS-LYG-- 375
+ + L+ + + D A + + E KR D+ T AM++ L+
Sbjct: 436 RMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCH 495
Query: 376 RKK-----LVAKTNKILKFMYE--SGFTLSLPGYNSLMYLHSRTRNFRK 417
R K L NK LK Y F + L +L +H + + +K
Sbjct: 496 RAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMKK 544
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 83/177 (46%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M S G PD+ T+ +I +EA + +E+ G PD+VTYN L V ++R+
Sbjct: 367 MISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRK 426
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
EA+++ +M PS+ TY LIS + + A +M ++ DV TY
Sbjct: 427 TDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCA 486
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIK 181
+++G + + + A + EE+ G K F++ + + G + KV + +K
Sbjct: 487 MINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMK 543
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 333 KTLVLVNSKFDFLAEAEHAFL----EFKKRG-----IPHDITTLNAMLSLYGRKKLVAKT 383
KT+VLV+ + L + +L +F KR +I N +L + LV +
Sbjct: 194 KTVVLVDVLLEILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEG 253
Query: 384 NKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYA 443
+L+ M +N L + R R+ +K+ +L E++E G +P+ +Y I
Sbjct: 254 EALLRRM-RHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDT 312
Query: 444 YCRNGKMTEAKRILNEM---KDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGC 500
+C+ G + EA + + M P T+ + A N E ++ MI GC
Sbjct: 313 FCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGC 372
Query: 501 KPDQNTYNSIVDWYCKLHLREEAYNFVHNLSS 532
PD +TY +++ C +EAY F+ +S+
Sbjct: 373 LPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSN 404
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 117/299 (39%), Gaps = 6/299 (2%)
Query: 217 RAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWE 276
R PE FN L+ A +CG + A+ +RM V PD +T+N + R +
Sbjct: 227 RVKTQPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPK 285
Query: 277 QSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLV 336
++ K+L EM KP TY + + + ++ L + + + A KT
Sbjct: 286 KAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFA 345
Query: 337 LVNSKFDFLAEAEHAFLEFKKR----GIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYE 392
L+ +AE F E R G D++T ++ + V + K L M
Sbjct: 346 LMIVALAKNDKAEECF-ELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSN 404
Query: 393 SGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTE 452
G+ + YN + + R ++ + ++E P + +YN++I +
Sbjct: 405 KGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDG 464
Query: 453 AKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
A EM V DV TY + EA +++ ++ +G K ++S +
Sbjct: 465 AFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFL 523
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/446 (21%), Positives = 195/446 (43%), Gaps = 20/446 (4%)
Query: 10 LAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAM 69
+ PD +T++S C E ++ I GL D N L+D Y K R A
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAH 304
Query: 70 EVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGF 129
++ M ++ +I+++T+L+S Y ++ L +EA+EL M + +KPD+Y +++L+
Sbjct: 305 KLFNGMPNK----NIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSC 360
Query: 130 VNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDI 189
+ +V A + N+LI MY + KVF A D+
Sbjct: 361 ASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAA----ADV 416
Query: 190 VTWNTLLAVFGQNGLDSEVS---GVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAV 246
V +N ++ + + G E+ +F++M+ P TF +L+ A + S ++ +
Sbjct: 417 VLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQI 476
Query: 247 YKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYAN 306
+ M + G+ D+ +A++ + + S V EM+ + V ++S+ Y
Sbjct: 477 HGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMK----VKDLVIWNSMFAGYVQ 532
Query: 307 GKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITT 366
E E+ L E+ + +V + + + KRG+ +
Sbjct: 533 QSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYI 592
Query: 367 LNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREIL 426
NA+L +Y + +K ++S + + +NS++ ++ +K+ +L +++
Sbjct: 593 TNALLDMYAKCGSPEDAHK----AFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMM 648
Query: 427 EKGIEPDLISYNIVIYAYCRNGKMTE 452
+GIEP+ I++ V+ A C + + E
Sbjct: 649 SEGIEPNYITFVGVLSA-CSHAGLVE 673
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 142/315 (45%), Gaps = 11/315 (3%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
DM+ + + P L TF +L+ + + + ++ + GL D+ +AL+DVY
Sbjct: 444 DMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCY 503
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYT 123
K++ V +M+ + +V + S+ + YV+ EEAL L ++ +PD +T+
Sbjct: 504 CLKDSRLVFDEMKVK----DLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFA 559
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
+++ N +L ++ G + N NAL+ MY G + K F
Sbjct: 560 NMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDS---- 615
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
S D+V WN++++ + +G + + ++M G P TF ++SA S G +
Sbjct: 616 AASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDG 675
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
++ ML G+ P+ Y +++ L R G ++ +++ +M KP + + SLL
Sbjct: 676 LKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPT---KPAAIVWRSLLSG 732
Query: 304 YANGKEFEKMNALAE 318
A E AE
Sbjct: 733 CAKAGNVELAEHAAE 747
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 118/578 (20%), Positives = 231/578 (39%), Gaps = 102/578 (17%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEE--------------------------------- 39
+L +++T++S C +YEE+L +F E
Sbjct: 109 NLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVF 168
Query: 40 -----IKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAY 94
+ +G D+ L+D Y K A V + + S VT+T++IS
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEK----STVTWTTMISGC 224
Query: 95 VRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNI 154
V+ G +L+L Q++E ++ PD Y +T+LS E ++ + G + +
Sbjct: 225 VKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDA 284
Query: 155 CTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKE 214
N LI Y G K+F + + +I++W TLL+ + QN L E +F
Sbjct: 285 SLMNVLIDSYVKCGRVIAAHKLFNGMP----NKNIISWTTLLSGYKQNALHKEAMELFTS 340
Query: 215 MKRAGFVPE---------------------------------RETF--NTLISAYSRCGS 239
M + G P+ +++ N+LI Y++C
Sbjct: 341 MSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDC 400
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALAR-GGLWEQSE--KVLSEMENGRCKPNEVT 296
AR V+ A D+ +NA++ +R G WE E + +M +P+ +T
Sbjct: 401 LTDARKVFDIFAAA----DVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLT 456
Query: 297 YSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFK 356
+ SLL A A+ + ++ + L+ V S L ++ F E K
Sbjct: 457 FVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMK 516
Query: 357 KRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFR 416
+ D+ N+M + Y ++ ++ + L E + P + + + N
Sbjct: 517 VK----DLVIWNSMFAGYVQQ---SENEEALNLFLELQLSRERPDEFTFANMVTAAGNLA 569
Query: 417 KSEM---ILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYN 473
++ ++L++G+E + N ++ Y + G +A + D A DVV +N
Sbjct: 570 SVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAF----DSAASRDVVCWN 625
Query: 474 TFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
+ +++YA + +A+ +++ M+ +G +P+ T+ ++
Sbjct: 626 SVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVL 663
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 137/314 (43%), Gaps = 55/314 (17%)
Query: 228 NTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMEN 287
N LI+ YSR G AR V+++M E +L +++ +++A G++E+S V E
Sbjct: 83 NILINLYSRAGGMVYARKVFEKMPE----RNLVSWSTMVSACNHHGIYEESLVVFLEFWR 138
Query: 288 GR-CKPNEVTYSSLLHAYA--NGK---------EFEKMNALAEEIYSGKITTHAVLLKTL 335
R PNE SS + A + +G+ F + ++Y G LL
Sbjct: 139 TRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVG------TLLIDF 192
Query: 336 VLVNSKFDFLAEAEHAFLEFKKRGIPHDIT-TLNAMLSLYGRKKLVAKTNKILKFMYE-- 392
L + D+ A L F +P T T M+S G K+ ++ L+ Y+
Sbjct: 193 YLKDGNIDY------ARLVFD--ALPEKSTVTWTTMIS--GCVKM-GRSYVSLQLFYQLM 241
Query: 393 ------SGFTLS--LPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAY 444
G+ LS L + L +L + I IL G+E D N++I +Y
Sbjct: 242 EDNVVPDGYILSTVLSACSILPFLEG-------GKQIHAHILRYGLEMDASLMNVLIDSY 294
Query: 445 CRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQ 504
+ G++ A ++ N M P +++++ T ++ Y N++ EA+ + M K G KPD
Sbjct: 295 VKCGRVIAAHKLFNGM----PNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDM 350
Query: 505 NTYNSIVDWYCKLH 518
+SI+ LH
Sbjct: 351 YACSSILTSCASLH 364
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 84/176 (47%), Gaps = 4/176 (2%)
Query: 48 DMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELK 107
D+V +N+++ Y K+A+++L++M S G P+ +T+ ++SA GL+E+ L+
Sbjct: 620 DVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQF 679
Query: 108 NQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDR 167
M+ I+P+ Y ++S A + A + E+M T KP + +L+
Sbjct: 680 ELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPT---KPAAIVWRSLLSGCAKA 736
Query: 168 GMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPE 223
G E+ + E+ D ++ L ++ G+ +E V + MK G V E
Sbjct: 737 GN-VELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKE 791
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 4/149 (2%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
ML M S+G+ P+ TF ++S C L E+ L+ FE + G+ P+ Y ++ + G
Sbjct: 643 MLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLG 702
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
++ R +A E++++M ++ P+ + + SL+S + G +E A E +M D
Sbjct: 703 RAGRLNKARELIEKMPTK---PAAIVWRSLLSGCAKAGNVELA-EHAAEMAILSDPKDSG 758
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAG 149
++T L + + + A +V E M+ G
Sbjct: 759 SFTMLSNIYASKGMWTEAKKVRERMKVEG 787
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 139/304 (45%), Gaps = 12/304 (3%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
+ +M G +PD T +++ C + E+ AG+ M +AL+++Y
Sbjct: 538 LFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYS 597
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K K A +V ++ P V+ +SLIS Y + GL+++ L MV D +
Sbjct: 598 KCGSLKLARQVYDRLPE--LDP--VSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSF 653
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
+++L + + L +V + G ++L+ MY G + K F +I
Sbjct: 654 AISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQI 713
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
PD++ W L+A + Q+G +E V+ MK GF P++ TF ++SA S G
Sbjct: 714 NG----PDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLV 769
Query: 241 DQARAVYKRML-EAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
+++ M+ + G+ P+ Y ++ AL R G ++E ++ M KP+ + + +
Sbjct: 770 EESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNM---HIKPDALVWGT 826
Query: 300 LLHA 303
LL A
Sbjct: 827 LLAA 830
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/464 (21%), Positives = 199/464 (42%), Gaps = 68/464 (14%)
Query: 12 PDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTY------------------- 52
PD+ + N +IS + L+EE+L F ++ G + ++Y
Sbjct: 113 PDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELV 172
Query: 53 ----------------NALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVR 96
+AL+DV+ K+ R ++A +V + ++ + ++I+ +R
Sbjct: 173 CCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRD----SLSANVYCWNTIIAGALR 228
Query: 97 DGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPN--- 153
+ +L ++M KPD YTY+++L+ + +K V + R C
Sbjct: 229 NQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVV--QARVIKCGAEDVF 286
Query: 154 ICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFK 213
+CT A++ +Y G AE +VF I +P +V+W +L+ + ++ +FK
Sbjct: 287 VCT--AIVDLYAKCGHMAEAMEVFSRIP----NPSVVSWTVMLSGYTKSNDAFSALEIFK 340
Query: 214 EMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGG 273
EM+ +G T ++ISA R +A V+ + ++G D S A+++ ++ G
Sbjct: 341 EMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSG 400
Query: 274 LWEQSEKVLSEMEN-GRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLL 332
+ SE+V ++++ R V +S + GK + +E + LL
Sbjct: 401 DIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL 460
Query: 333 KTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILK---F 389
L +N L + H + K G+ D+T +++ +LY + + ++ K+ + F
Sbjct: 461 SVLDCLN-----LGKQVHGYT--LKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPF 513
Query: 390 MYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPD 433
+ + + G+N YL R++ + E+L+ G PD
Sbjct: 514 KDNACWASMISGFNEYGYL-------REAIGLFSEMLDDGTSPD 550
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 112/532 (21%), Positives = 225/532 (42%), Gaps = 52/532 (9%)
Query: 32 EALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLI 91
EA+E+F I P +V++ +L Y KS A+E+ K+M G + T TS+I
Sbjct: 303 EAMEVFSRIP----NPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVI 358
Query: 92 SAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCK 151
SA R ++ EA ++ + + D L+S + + +L+ +VFE++ +
Sbjct: 359 SACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQ-R 417
Query: 152 PNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGV 211
NI N +I + + ++F + D + +LL+V L +V G
Sbjct: 418 QNI--VNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGY 475
Query: 212 FKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVT-PDLSTYNAVLAALA 270
++G V + ++L + YS+CGS +++ +++ G+ D + + ++++
Sbjct: 476 ---TLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQ-----GIPFKDNACWASMISGFN 527
Query: 271 RGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAV 330
G ++ + SEM + P+E T +++L ++ + + I
Sbjct: 528 EYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMD 587
Query: 331 LLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFM 390
L LV + SK L A + R D + ++++S Y + L+ + + M
Sbjct: 588 LGSALVNMYSKCGSLKLARQVY----DRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDM 643
Query: 391 YESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGI-------------------- 430
SGFT+ +S++ + + + I + G+
Sbjct: 644 VMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSI 703
Query: 431 -----------EPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATY 479
PDLI++ +I +Y ++GK EA ++ N MK+ PD VT+ ++
Sbjct: 704 DDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSAC 763
Query: 480 AANSMFGEAIGVVQCMIKQ-GCKPDQNTYNSIVDWYCKLHLREEAYNFVHNL 530
+ + E+ + M+K G +P+ Y +VD + EA +F++N+
Sbjct: 764 SHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNM 815
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 27/212 (12%)
Query: 17 FNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQME 76
F ++ CC+A F +I PD++ + AL+ Y + + EA++V M+
Sbjct: 700 FGSIDDCCKA----------FSQIN----GPDLIAWTALIASYAQHGKANEALQVYNLMK 745
Query: 77 SRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKH-IKPDVYTYTTLLSGFVNAKKD 135
+GF P VT+ ++SA GL+EE+ N MV+ + I+P+ Y ++ + +
Sbjct: 746 EKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRL 805
Query: 136 ELAMRVFEEMRTAGCKPNICTFNALI---KMYGDRGMFAEMGKVFKEIKACQCSP-DIVT 191
A M KP+ + L+ K++G+ E+GKV + KA + P D
Sbjct: 806 REAESFINNMHI---KPDALVWGTLLAACKIHGE----VELGKVAAK-KAIELEPSDAGA 857
Query: 192 WNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPE 223
+ +L + + G EV K MK G E
Sbjct: 858 YISLSNILAEVGEWDEVEETRKLMKGTGVQKE 889
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 126/574 (21%), Positives = 230/574 (40%), Gaps = 81/574 (14%)
Query: 1 MLMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
++ ++K++ + D F L+ CRA + + ALE+ + +K L D Y ++ Y
Sbjct: 351 LIRELKNKEMCLDAKYFEILVKGLCRANRMVD-ALEIVDIMKRRKL-DDSNVYGIIISGY 408
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
+ +A+E + ++ G PP + TYT ++ + E+ L N+M+E I+PD
Sbjct: 409 LRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDS 468
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
T +++G + + A +VF M G KP +++ +K + E+ K+F +
Sbjct: 469 VAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQ 528
Query: 180 IKACQ--CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMK--------------RAGFVPE 223
+ A + DI +W +++ +NG + E + KE++ +A F E
Sbjct: 529 MHASKIVIRDDIFSW--VISSMEKNG-EKEKIHLIKEIQKRSNSYCDELNGSGKAEFSQE 585
Query: 224 RETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNA-----VLAALARGGLWEQS 278
E L+ Y+ C Q ++ + P LS + + L+ WE++
Sbjct: 586 EE----LVDDYN-CPQLVQ---------QSALPPALSAVDKMDVQEICRVLSSSRDWERT 631
Query: 279 EKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLV 338
++ L E + P E+ L HA G + + + K + A + V
Sbjct: 632 QEAL-EKSTVQFTP-ELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAG 689
Query: 339 NSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLS 398
K DF + F E +++G T M+ YGR L + K M + G S
Sbjct: 690 CGK-DF-KQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPS 747
Query: 399 LPGYNSLMYL--HSRTRNFRKSEMILREILEKGIEPD----------------------- 433
+ L+ + + RN ++ RE++ G PD
Sbjct: 748 SSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSC 807
Query: 434 -----------LISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAAN 482
++Y+I I A CR GK+ EA L + + D TY + V
Sbjct: 808 LDSLGKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQR 867
Query: 483 SMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
+A+ V M + G KP + Y S++ ++ K
Sbjct: 868 GDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFK 901
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 122/273 (44%), Gaps = 5/273 (1%)
Query: 4 DMKSQGLAPDLCTFNTLIS--CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGK 61
+MK GL P TF LI+ C + G EEA F E+ +G PD L +
Sbjct: 738 EMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCE 797
Query: 62 SRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEAL-ELKNQMVEKHIKPDVY 120
K+A L + GFP + V Y+ I A R G LEEAL EL + E+ + D Y
Sbjct: 798 VGNTKDAKSCLDSLGKIGFPVT-VAYSIYIRALCRIGKLEEALSELASFEGERSL-LDQY 855
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI 180
TY +++ G + + A+ M+ G KP + + +LI + ++ + +++
Sbjct: 856 TYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKM 915
Query: 181 KACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 240
+ C P +VT+ ++ + G E F+ M+ G P+ +T++ I+ +
Sbjct: 916 EGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKS 975
Query: 241 DQARAVYKRMLEAGVTPDLSTYNAVLAALARGG 273
+ A + ML+ G+ P + V L R G
Sbjct: 976 EDALKLLSEMLDKGIAPSTINFRTVFYGLNREG 1008
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/440 (21%), Positives = 185/440 (42%), Gaps = 68/440 (15%)
Query: 137 LAMRVFEEMRTA-GCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTL 195
LAMR F ++ G + +N ++ + G+ + ++ E++ C DI TW L
Sbjct: 171 LAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTIL 230
Query: 196 LAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGV 255
++V+G+ + VF++M+++GF + +N +I + G D A YK M+E G+
Sbjct: 231 ISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGI 290
Query: 256 TPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNE-VTYSSLLHAYANGKEFEKMN 314
T L TY +L +A+ + + + +M C+ +E + LL ++ + ++
Sbjct: 291 TFGLRTYKMLLDCIAKSEKVDVVQSIADDMVR-ICEISEHDAFGYLLKSFCVSGKIKEAL 349
Query: 315 ALAEEIYSGKITTHA----VLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAM 370
L E+ + ++ A +L+K L N D L ++ KR D +
Sbjct: 350 ELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALE-----IVDIMKRRKLDDSNVYGII 404
Query: 371 LSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGI 430
+S Y R+ V+K + + + +SG + Y +M + + F K + E++E GI
Sbjct: 405 ISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGI 464
Query: 431 EPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIG 490
E PD V VA + + EA
Sbjct: 465 E-----------------------------------PDSVAITAVVAGHLGQNRVAEAWK 489
Query: 491 VVQCMIKQGCKPDQNTYNSIVDWYC------------------KLHLREEAYNFVHNLSS 532
V M ++G KP +Y+ V C K+ +R++ +++V +SS
Sbjct: 490 VFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWV--ISS 547
Query: 533 LDLHVSEEEKGRLLERIAEK 552
++ + E+EK L++ I ++
Sbjct: 548 MEKN-GEKEKIHLIKEIQKR 566
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 139/330 (42%), Gaps = 16/330 (4%)
Query: 134 KDELAMR-VFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTW 192
KD MR +F EMR GC T+ +I YG G+ + FKE+K P T+
Sbjct: 692 KDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTF 751
Query: 193 NTLLAVF----GQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYK 248
L+ V G+N E + F+EM R+GFVP+RE + G+ A++
Sbjct: 752 KCLITVLCEKKGRNV--EEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLD 809
Query: 249 RMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYAN-- 306
+ + G P Y+ + AL R G E++ L+ E R ++ TY S++H
Sbjct: 810 SLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRG 868
Query: 307 --GKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDI 364
K +K+N++ E K H + +L++ K L + + + +
Sbjct: 869 DLQKALDKVNSMKE--IGTKPGVH--VYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSV 924
Query: 365 TTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILRE 424
T AM+ Y V + + M E G + Y+ + + + +L E
Sbjct: 925 VTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSE 984
Query: 425 ILEKGIEPDLISYNIVIYAYCRNGKMTEAK 454
+L+KGI P I++ V Y R GK A+
Sbjct: 985 MLDKGIAPSTINFRTVFYGLNREGKHDLAR 1014
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 115/581 (19%), Positives = 217/581 (37%), Gaps = 112/581 (19%)
Query: 4 DMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSR 63
+M G+ PD +++ + EA ++F ++ G++P +Y+ + +S
Sbjct: 458 EMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSS 517
Query: 64 RPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDG------LLEEALELKN--------- 108
R E +++ QM + ++ +IS+ ++G L++E + N
Sbjct: 518 RYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKEKIHLIKEIQKRSNSYCDELNGS 577
Query: 109 ------------------QMVEKHIKP---------DVYTYTTLLSGFVNAKKDELAMR- 140
Q+V++ P DV +LS + ++ + A+
Sbjct: 578 GKAEFSQEEELVDDYNCPQLVQQSALPPALSAVDKMDVQEICRVLSSSRDWERTQEALEK 637
Query: 141 ---------VFEEMRTA------------------GCKPNICTFNALIKMYGDRGMFAEM 173
V E +R A G K N +N IK+ G F +M
Sbjct: 638 STVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQM 697
Query: 174 GKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISA 233
+F E++ C TW ++ +G+ GL + FKEMK G +P TF LI+
Sbjct: 698 RSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITV 757
Query: 234 Y--SRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCK 291
+ + ++A ++ M+ +G PD L L G + ++ L + G+
Sbjct: 758 LCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSL--GKIG 815
Query: 292 -PNEVTYSSLLHAYAN-GKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAE 349
P V YS + A GK E ++ LA E E
Sbjct: 816 FPVTVAYSIYIRALCRIGKLEEALSELAS---------------------------FEGE 848
Query: 350 HAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLH 409
+ L+ G + ++ +L +K + K N M E G + Y SL+
Sbjct: 849 RSLLDQYTYG-----SIVHGLLQRGDLQKALDKVNS----MKEIGTKPGVHVYTSLIVYF 899
Query: 410 SRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDV 469
+ + K +++ + EP +++Y +I Y GK+ EA M++ PD
Sbjct: 900 FKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDF 959
Query: 470 VTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSI 510
TY+ F+ +A+ ++ M+ +G P + ++
Sbjct: 960 KTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTV 1000
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/393 (20%), Positives = 162/393 (41%), Gaps = 47/393 (11%)
Query: 6 KSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRP 65
+ G + + +NT++S + EL E++ G D+ T+ L+ VYGK+++
Sbjct: 181 QKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKI 240
Query: 66 KEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTL 125
+ + V ++M GF Y +I + G + ALE +M+EK I + TY L
Sbjct: 241 GKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKML 300
Query: 126 LSGFVNAKKDELAMRVFEEMRTAGCKPNIC------TFNALIKMYGDRGMFAEMGKVFKE 179
L ++K ++ + ++M IC F L+K + G E ++ +E
Sbjct: 301 LDCIAKSEKVDVVQSIADDM------VRICEISEHDAFGYLLKSFCVSGKIKEALELIRE 354
Query: 180 IKACQCSPD----------------IVTWNTLLAVFGQNGL-DSEVSGV----------- 211
+K + D +V ++ + + L DS V G+
Sbjct: 355 LKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDV 414
Query: 212 ------FKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAV 265
F+ +K++G P T+ ++ + F++ ++ M+E G+ PD AV
Sbjct: 415 SKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAV 474
Query: 266 LAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKI 325
+A ++ KV S ME KP +YS + ++++ + ++++ KI
Sbjct: 475 VAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKI 534
Query: 326 TTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKR 358
+ + V+ + + + E H E +KR
Sbjct: 535 VIRDDIF-SWVISSMEKNGEKEKIHLIKEIQKR 566
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 140/299 (46%), Gaps = 20/299 (6%)
Query: 8 QGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKE 67
+GL D NT++ EA +F L + D+V +N+++ + K +
Sbjct: 155 EGLEDDSFIRNTMLHMYVTCGCLIEAWRIF----LGMIGFDVVAWNSMIMGFAKCGLIDQ 210
Query: 68 AMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLS 127
A + +M R + V++ S+IS +VR+G ++AL++ +M EK +KPD +T +LL+
Sbjct: 211 AQNLFDEMPQR----NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLN 266
Query: 128 GFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSP 187
E + E + + N ALI MY G E VF +C+P
Sbjct: 267 ACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVF------ECAP 320
Query: 188 --DIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARA 245
+ WN+++ NG + +F E++R+G P+ +F +++A + G +A
Sbjct: 321 KKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADE 380
Query: 246 VYKRMLEA-GVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
++ M E + P + Y ++ L GL E++E ++ M + + V +SSLL A
Sbjct: 381 FFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMP---VEEDTVIWSSLLSA 436
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 103/487 (21%), Positives = 200/487 (41%), Gaps = 63/487 (12%)
Query: 9 GLAPDLCTFNTLIS-CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKE 67
GL D T + +++ CC + S A +F I + +N ++ + +S P+
Sbjct: 52 GLISDTVTASRVLAFCCASPSDMNYAYLVFTRIN----HKNPFVWNTIIRGFSRSSFPEM 107
Query: 68 AMEVLKQM--ESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTL 125
A+ + M S P +TY S+ AY R G + +L ++++ ++ D + T+
Sbjct: 108 AISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTM 167
Query: 126 LSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQC 185
L +V T GC I + + M G
Sbjct: 168 LHMYV----------------TCGCL--IEAWRIFLGMIG-------------------- 189
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERE--TFNTLISAYSRCGSFDQA 243
D+V WN+++ F + GL + +F EM P+R ++N++IS + R G F A
Sbjct: 190 -FDVVAWNSMIMGFAKCGLIDQAQNLFDEM------PQRNGVSWNSMISGFVRNGRFKDA 242
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
+++ M E V PD T ++L A A G EQ + + R + N + ++L+
Sbjct: 243 LDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDM 302
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
Y E+ + E +++ ++ L L N+ F+ A F E ++ G+ D
Sbjct: 303 YCKCGCIEEGLNVFECAPKKQLSCWNSMI--LGLANNGFE--ERAMDLFSELERSGLEPD 358
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESGFT-LSLPGYNSLMYLHSRTRNFRKSEMIL 422
+ +L+ V + ++ + M E S+ Y ++ + ++E ++
Sbjct: 359 SVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALI 418
Query: 423 REILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAAN 482
+ + +E D + ++ ++ A + G + AKR +K P + Y YA+
Sbjct: 419 KNM---PVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDP-DETCGYVLLSNAYASY 474
Query: 483 SMFGEAI 489
+F EA+
Sbjct: 475 GLFEEAV 481
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 116/495 (23%), Positives = 212/495 (42%), Gaps = 63/495 (12%)
Query: 6 KSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRP 65
K APD TF TL C + L+L +I G DM ++D+Y K +
Sbjct: 70 KETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKM 129
Query: 66 KEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTL 125
A +M R S V++T+LIS Y+R G L+ A +L +QM H+K DV Y +
Sbjct: 130 GCARNAFDEMPHR----SEVSWTALISGYIRCGELDLASKLFDQM--PHVK-DVVIYNAM 182
Query: 126 LSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQC 185
+ GFV + A R+F+EM + T+ +I Y + K+F +
Sbjct: 183 MDGFVKSGDMTSARRLFDEM----THKTVITWTTMIHGYCNIKDIDAARKLFDAMP---- 234
Query: 186 SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMK-RAGFVPERETFNTLISAYSRCGSFDQAR 244
++V+WNT++ + QN E +F+EM+ P+ T +++ A S G+
Sbjct: 235 ERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGE 294
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
+ + + + A+L ++ G E+++++ EM + ++++++H Y
Sbjct: 295 WCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQV----ASWNAMIHGY 350
Query: 305 A-NGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
A NG NA A A+ L +++ K P +
Sbjct: 351 ALNG------NARA-----------ALDLFVTMMIEEK-------------------PDE 374
Query: 364 ITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILR 423
IT L A+++ LV + K M E G + Y ++ L R + +++E ++
Sbjct: 375 ITML-AVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLIT 433
Query: 424 EILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANS 483
+ EP+ I + + A + + A+RIL + + P D Y YAA+
Sbjct: 434 NM---PFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQND-GNYVLLRNLYAADK 489
Query: 484 MFGEAIGVVQCMIKQ 498
+ + G+V+ ++++
Sbjct: 490 RWDD-FGMVKNVMRK 503
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 98/467 (20%), Positives = 177/467 (37%), Gaps = 104/467 (22%)
Query: 89 SLISAYVRDGLLEEALEL-KNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRT 147
S+I AY+ ++ L ++ E PD +T+TTL K L+M V++ ++
Sbjct: 47 SMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTL------TKSCSLSMCVYQGLQL 100
Query: 148 AGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSE 207
I F MY G+ + A FG+ G
Sbjct: 101 ---HSQIWRFGFCADMYVSTGVV-----------------------DMYAKFGKMGC--- 131
Query: 208 VSGVFKEMKRAGFVPERE--TFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAV 265
F EM P R ++ LIS Y RCG D A ++ +M D+ YNA+
Sbjct: 132 ARNAFDEM------PHRSEVSWTALISGYIRCGELDLASKLFDQMPH---VKDVVIYNAM 182
Query: 266 LAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKI 325
+ + G + ++ EM + +T+++++H Y N K+ + L
Sbjct: 183 MDGFVKSGDMTSARRLFDEMTH----KTVITWTTMIHGYCNIKDIDAARKL--------- 229
Query: 326 TTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNK 385
FD + E ++ + N M+ Y + K + +
Sbjct: 230 ----------------FDAMPE--------------RNLVSWNTMIGGYCQNK---QPQE 256
Query: 386 ILKFMYESGFTLSLPGYN----SLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVI 441
++ E T SL + S++ S T E + K ++ + ++
Sbjct: 257 GIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAIL 316
Query: 442 YAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGV-VQCMIKQGC 500
Y + G++ +AKRI +EM P V ++N + YA N A+ + V MI++
Sbjct: 317 DMYSKCGEIEKAKRIFDEM----PEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-- 370
Query: 501 KPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDLHVSEEEKGRLLE 547
KPD+ T +++ L EE + H + + L+ E G +++
Sbjct: 371 KPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVD 417
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 123/242 (50%), Gaps = 17/242 (7%)
Query: 49 MVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKN 108
+V N + +Y + + E+++++ +E P V++ I+A R EE +EL
Sbjct: 479 VVPLNIVAGIYSRRGQYHESVKLISTLEQ----PDTVSWNIAIAACSRSDYHEEVIELFK 534
Query: 109 QMVEKHIKPDVYTYTTLLSGFVNAKKDELAMR-----VFEEMRTAGCKPNICTFNALIKM 163
M++ +I+PD YT+ ++LS + +K +L + + + + +C N LI M
Sbjct: 535 HMLQSNIRPDKYTFVSILS--LCSKLCDLTLGSSIHGLITKTDFSCADTFVC--NVLIDM 590
Query: 164 YGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPE 223
YG G + KVF+E + +++TW L++ G +G E FKE GF P+
Sbjct: 591 YGKCGSIRSVMKVFEETR----EKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPD 646
Query: 224 RETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLS 283
R +F ++++A G + ++++M + GV P++ Y + LAR G +++E ++
Sbjct: 647 RVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIR 706
Query: 284 EM 285
EM
Sbjct: 707 EM 708
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 134/551 (24%), Positives = 231/551 (41%), Gaps = 110/551 (19%)
Query: 28 SLYEEALELFEEIKLAGLRPDM------VTYNALLDVYGKSRRPKEAMEVLKQMESRGFP 81
SLYE+ E+ LAG D V++N ++ Y K +A V +M G+
Sbjct: 57 SLYEK----LGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 82 PSIVTYTSLISAY---VRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELA 138
P+ T + L+S VR G L LK + D + T LL + E+A
Sbjct: 113 PNQSTVSGLLSCASLDVRAGTQLHGLSLKYGL----FMADAFVGTCLLCLYGRLDLLEMA 168
Query: 139 MRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEI----------------KA 182
+VFE+M + T+N ++ + G RG E F+E+ K
Sbjct: 169 EQVFEDMPFKSLE----TWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKG 224
Query: 183 CQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQ 242
C D+ L + GLD E+S V N+LISAY +CG+
Sbjct: 225 VSCVKDLDISKQLHCSATKKGLDCEISVV----------------NSLISAYGKCGNTHM 268
Query: 243 ARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLH 302
A +RM + + D+ ++NA++ A A+ ++ K+ M PN+ TY S+L
Sbjct: 269 A----ERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVL- 323
Query: 303 AYANGKEFEKMNALAEEIYSGKITTHAVLLKT-----LVLVNSKFDFLAEAEHAFLEFKK 357
+++L + + G+ H +L+K +VL N+ DF A+ + LE +
Sbjct: 324 ---------GVSSLVQLLSCGR-QIHGMLIKNGCETGIVLGNALIDFYAKCGN--LEDSR 371
Query: 358 RGIPH----DITTLNAMLSLYGRKKLVAKTNKILKFMY------ESGFTLSLP------- 400
+ +I NA+LS Y K + L+ + E F+ +L
Sbjct: 372 LCFDYIRDKNIVCWNALLSGYANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTEL 431
Query: 401 ----------GYNSLMY-LHSRTRNFRKSEMILREIL--EKGIEP-DLISYNIVIYAYCR 446
GY Y L S R++ K++++ +L + P ++ NIV Y R
Sbjct: 432 QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSR 491
Query: 447 NGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNT 506
G+ E+ ++++ ++ P D V++N +A + + E I + + M++ +PD+ T
Sbjct: 492 RGQYHESVKLISTLEQP----DTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYT 547
Query: 507 YNSIVDWYCKL 517
+ SI+ KL
Sbjct: 548 FVSILSLCSKL 558
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 108/477 (22%), Positives = 191/477 (40%), Gaps = 52/477 (10%)
Query: 44 GLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEA 103
GL ++ N+L+ YGK A + + S IV++ ++I A + +A
Sbjct: 245 GLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSW----DIVSWNAIICATAKSENPLKA 300
Query: 104 LELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKM 163
L+L M E P+ TY ++L + ++ + GC+ I NALI
Sbjct: 301 LKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDF 360
Query: 164 YGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVS-GVFKEMKRAGFVP 222
Y G + F I+ +IV WN LL+ + D + +F +M + GF P
Sbjct: 361 YAKCGNLEDSRLCFDYIR----DKNIVCWNALLSGYANK--DGPICLSLFLQMLQMGFRP 414
Query: 223 ERETFNT------------LISAYSRCG---------SFDQARAVYKRMLEAGVTPDLST 261
TF+T L S R G S ++ A + M +A + D ++
Sbjct: 415 TEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWAS 474
Query: 262 -------YNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMN 314
N V +R G + +S K++S +E +P+ V+++ + A + E++
Sbjct: 475 GPTSVVPLNIVAGIYSRRGQYHESVKLISTLE----QPDTVSWNIAIAACSRSDYHEEVI 530
Query: 315 ALAEEIYSGKITTHAVLLKTLVLVNSKF-DF-LAEAEHAFLEFKKRGIPHDITTLNAMLS 372
L + + I +++ + SK D L + H + K D N ++
Sbjct: 531 ELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLIT-KTDFSCADTFVCNVLID 589
Query: 373 LYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEP 432
+YG+ + K+ + E ++ S + +H + + +E L G +P
Sbjct: 590 MYGKCGSIRSVMKVFEETREKNL-ITWTALISCLGIHGYGQEALEK---FKETLSLGFKP 645
Query: 433 DLISYNIVIYAYCRNGKMT-EAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEA 488
D +S+ I I CR+G M E + +MKD P++ Y V A N EA
Sbjct: 646 DRVSF-ISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEA 701
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 94/498 (18%), Positives = 206/498 (41%), Gaps = 49/498 (9%)
Query: 8 QGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKE 67
+GL ++ N+LIS A +F++ AG D+V++NA++ KS P +
Sbjct: 244 KGLDCEISVVNSLISAYGKCGNTHMAERMFQD---AG-SWDIVSWNAIICATAKSENPLK 299
Query: 68 AMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLS 127
A+++ M GF P+ TY S++ LL ++ +++ + + L+
Sbjct: 300 ALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALID 359
Query: 128 GFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDR------GMFAEMGKV-FK-- 178
+ E + F+ +R NI +NAL+ Y ++ +F +M ++ F+
Sbjct: 360 FYAKCGNLEDSRLCFDYIR----DKNIVCWNALLSGYANKDGPICLSLFLQMLQMGFRPT 415
Query: 179 ------EIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKE------MKRAGFVPERET 226
+K+C C ++ ++++ G D +S + + M A + + +
Sbjct: 416 EYTFSTALKSC-CVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWAS 474
Query: 227 -------FNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSE 279
N + YSR G + ++ +++ PD ++N +AA +R E+
Sbjct: 475 GPTSVVPLNIVAGIYSRRGQYHES----VKLISTLEQPDTVSWNIAIAACSRSDYHEEVI 530
Query: 280 KVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKIT-THAVLLKTLVLV 338
++ M +P++ T+ S+L + + +++ I + + L+ +
Sbjct: 531 ELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDM 590
Query: 339 NSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLS 398
K + F E +++ ++ T A++S G + + K GF
Sbjct: 591 YGKCGSIRSVMKVFEETREK----NLITWTALISCLGIHGYGQEALEKFKETLSLGFKPD 646
Query: 399 LPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILN 458
+ S++ ++ + +++ + G+EP++ Y + RNG + EA+ ++
Sbjct: 647 RVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIR 706
Query: 459 EMKDPAPVPDVVTYNTFV 476
EM PA P + TF+
Sbjct: 707 EMPFPADAP---VWRTFL 721
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 6/134 (4%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVL 72
+L T+ LISC +EALE F+E G +PD V++ ++L KE M +
Sbjct: 611 NLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLF 670
Query: 73 KQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSG---F 129
++M+ G P + Y + R+G L+EA L +M D + T L G F
Sbjct: 671 QKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREM---PFPADAPVWRTFLDGCNRF 727
Query: 130 VNAKKDELAMRVFE 143
+++ L + F+
Sbjct: 728 AEEQRNTLNVVSFQ 741
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 125/585 (21%), Positives = 229/585 (39%), Gaps = 87/585 (14%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALE-LFEEIKLAGLRPDMVTYNALLDVY 59
+ + M S+ + P+ TF+ ++ CR GS+ + +E + I GLR V N L+D+Y
Sbjct: 173 LFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLY 232
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
++ A V + + ++ ++IS ++ EA+ L M I P
Sbjct: 233 SRNGFVDLARRVFDGLRLKDHS----SWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTP 288
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
Y ++++LS + E+ ++ + G + NAL+ +Y G +F
Sbjct: 289 YAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSN 348
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+ D VT+NTL+ Q G + +FK M G P+ T +L+ A S G+
Sbjct: 349 MS----QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGT 404
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGG------------------LW------ 275
+ + ++ + G + A+L A+ LW
Sbjct: 405 LFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVA 464
Query: 276 -------EQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYS------ 322
S ++ +M+ PN+ TY S+L + E L E+I+S
Sbjct: 465 YGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE----LGEQIHSQIIKTN 520
Query: 323 ------------------GKITT-----------HAVLLKTLVLVNSKFDFLAEAEHAFL 353
GK+ T V T++ ++++F +A F
Sbjct: 521 FQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFR 580
Query: 354 EFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTR 413
+ RGI D L +S + + + +I SGF+ LP N+L+ L+SR
Sbjct: 581 QMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCG 640
Query: 414 NFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYN 473
+S + + E G D I++N ++ + ++G EA R+ M + T+
Sbjct: 641 KIEESYLAFEQT-EAG---DNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFG 696
Query: 474 TFV--ATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
+ V A+ AN G+ + V + K G + N+++ Y K
Sbjct: 697 SAVKAASETANMKQGKQVHAV--ITKTGYDSETEVCNALISMYAK 739
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 159/337 (47%), Gaps = 15/337 (4%)
Query: 1 MLMDMKSQGLAPDLCTFNTLI-SCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVY 59
+ M+ + + P+ T+ +++ +C R G L E ++ +I + + + L+D+Y
Sbjct: 477 IFRQMQIEEIVPNQYTYPSILKTCIRLGDL-ELGEQIHSQIIKTNFQLNAYVCSVLIDMY 535
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDV 119
K + A ++L + + +V++T++I+ Y + ++AL QM+++ I+ D
Sbjct: 536 AKLGKLDTAWDILIRFAGK----DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDE 591
Query: 120 YTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKE 179
T +S + + ++ + +G ++ NAL+ +Y G E F++
Sbjct: 592 VGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQ 651
Query: 180 IKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 239
+A D + WN L++ F Q+G + E VF M R G TF + + A S +
Sbjct: 652 TEA----GDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETAN 707
Query: 240 FDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSS 299
Q + V+ + + G + NA+++ A+ G +EK E+ NEV++++
Sbjct: 708 MKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST----KNEVSWNA 763
Query: 300 LLHAYA-NGKEFEKMNALAEEIYSGKITTHAVLLKTL 335
+++AY+ +G E +++ + I+S H L+ L
Sbjct: 764 IINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVL 800
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/557 (18%), Positives = 213/557 (38%), Gaps = 93/557 (16%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTY-------------------- 52
D T+NTLI+ E+A+ELF+ + L GL PD T
Sbjct: 353 DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLH 412
Query: 53 ---------------NALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRD 97
ALL++Y K + A++ + E ++V + ++ AY
Sbjct: 413 AYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE----NVVLWNVMLVAY--- 465
Query: 98 GLLEE---ALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNI 154
GLL++ + + QM + I P+ YTY ++L + EL ++ ++ + N
Sbjct: 466 GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA 525
Query: 155 CTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKE 214
+ LI MY G + D+V+W T++A + Q D + F++
Sbjct: 526 YVCSVLIDMYAKLGKLDTAWDILIRFAG----KDVVSWTTMIAGYTQYNFDDKALTTFRQ 581
Query: 215 MKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGL 274
M G + +SA + + + + ++ + +G + DL NA++ +R G
Sbjct: 582 MLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGK 641
Query: 275 WEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKT 334
E+S + E G + + +++L+ + E
Sbjct: 642 IEESYLAFEQTEAG----DNIAWNALVSGFQQSGNNE----------------------- 674
Query: 335 LVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESG 394
EA F+ + GI ++ T + + + + ++ + ++G
Sbjct: 675 ------------EALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTG 722
Query: 395 FTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAK 454
+ N+L+ ++++ + +E E+ K + +S+N +I AY ++G +EA
Sbjct: 723 YDSETEVCNALISMYAKCGSISDAEKQFLEVSTK----NEVSWNAIINAYSKHGFGSEAL 778
Query: 455 RILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQ-GCKPDQNTYNSIVDW 513
++M P+ VT ++ + + + I + M + G P Y +VD
Sbjct: 779 DSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDM 838
Query: 514 YCKLHLREEAYNFVHNL 530
+ L A F+ +
Sbjct: 839 LTRAGLLSRAKEFIQEM 855
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 107/515 (20%), Positives = 198/515 (38%), Gaps = 85/515 (16%)
Query: 91 ISAYVRDGLLEEALELK--NQMVEKHIKPDVYTYTTLLSGFV--NAKKDELAMRVFEEMR 146
IS Y+ + +E+ + K + + + I+P+ T LL G + N DE ++ ++
Sbjct: 57 ISVYISE---DESFQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDE-GRKLHSQIL 112
Query: 147 TAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDS 206
G N C L Y +G KVF E+ I TWN ++ L
Sbjct: 113 KLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMP----ERTIFTWNKMIKELASRNLIG 168
Query: 207 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGS--FDQARAVYKRMLEAGVTPDLSTYNA 264
EV G+F M P TF+ ++ A R GS FD ++ R+L G+ N
Sbjct: 169 EVFGLFVRMVSENVTPNEGTFSGVLEA-CRGGSVAFDVVEQIHARILYQGLRDSTVVCNP 227
Query: 265 VLAALARGGLWEQSEKV---------------LSEMENGRCK----------------PN 293
++ +R G + + +V +S + C+ P
Sbjct: 228 LIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPT 287
Query: 294 EVTYSSLLHAYAN------GKEFEKM-------------NAL------------AEEIYS 322
+SS+L A G++ + NAL AE I+S
Sbjct: 288 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFS 347
Query: 323 GKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAK 382
AV TL+ S+ + +A F G+ D TL +++ + +
Sbjct: 348 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 407
Query: 383 TNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIY 442
++ + + GF + +L+ L+++ + E L LE +E +++ +N+++
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADI---ETALDYFLETEVE-NVVLWNVMLV 463
Query: 443 AYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVAT--YAANSMFGEAIGVVQCMIKQGC 500
AY + + RI +M+ VP+ TY + + T + GE I +IK
Sbjct: 464 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH--SQIIKTNF 521
Query: 501 KPDQNTYNSIVDWYCKLHLREEAYNFVHNLSSLDL 535
+ + + ++D Y KL + A++ + + D+
Sbjct: 522 QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV 556
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 137/300 (45%), Gaps = 18/300 (6%)
Query: 23 CCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPP 82
C R G E+ I AGL D V +++L+D+YGK EA + ++ +
Sbjct: 233 CIRRGK------EIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEK---- 282
Query: 83 SIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVF 142
+V++TS+I Y + E L +++V +P+ YT+ +L+ + +EL +V
Sbjct: 283 DVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVH 342
Query: 143 EEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQN 202
M G P ++L+ MY G V + C PD+V+W +L+ QN
Sbjct: 343 GYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHV---VDGCP-KPDLVSWTSLIGGCAQN 398
Query: 203 GLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLST- 261
G E F + ++G P+ TF ++SA + G ++ + + E S
Sbjct: 399 GQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDH 458
Query: 262 YNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIY 321
Y ++ LAR G +EQ + V+SEM KP++ ++S+L + + A+E++
Sbjct: 459 YTCLVDLLARSGRFEQLKSVISEMP---MKPSKFLWASVLGGCSTYGNIDLAEEAAQELF 515
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/423 (21%), Positives = 165/423 (39%), Gaps = 122/423 (28%)
Query: 29 LYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYT 88
L EA++L K +P TY L+ V ++R +E +V + + + GF P IV +
Sbjct: 69 LLREAVQLLGRAK----KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWN 124
Query: 89 SLISAYV-----------------RD--------------GLLEEALELKNQMVEKHIKP 117
L+ Y RD GLLEEA +L ++M EK
Sbjct: 125 RLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK---- 180
Query: 118 DVYTYTTLLSGFVNAKKDELAMRVFEEM-RTAGCKPNICT-------------------- 156
D Y++T +++G+V + E A+ ++ M R +PNI T
Sbjct: 181 DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEI 240
Query: 157 ---------------FNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQ 201
+++L+ MYG G E +F +I D+V+W +++ + +
Sbjct: 241 HGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI----VEKDVVSWTSMIDRYFK 296
Query: 202 NGLDSEVSGVFKE-----------------------------------MKRAGFVPERET 226
+ E +F E M R GF P
Sbjct: 297 SSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFA 356
Query: 227 FNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEME 286
++L+ Y++CG+ + A K +++ PDL ++ +++ A+ G +++ K +
Sbjct: 357 SSSLVDMYTKCGNIESA----KHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLL 412
Query: 287 NGRCKPNEVTYSSLL----HAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKF 342
KP+ VT+ ++L HA K E ++ E+ + H L L+ + +F
Sbjct: 413 KSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRF 472
Query: 343 DFL 345
+ L
Sbjct: 473 EQL 475
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 87/215 (40%), Gaps = 46/215 (21%)
Query: 46 RPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALE 105
+PD+V++ +L+ ++ +P EA++ + G P VT+ +++SA GL+E+ LE
Sbjct: 382 KPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLE 441
Query: 106 LKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYG 165
+ EKH + + L+ +
Sbjct: 442 FFYSITEKHRLSHTSDH----------------------------------YTCLVDLLA 467
Query: 166 DRGMFAEMGKVFKEIKACQCSPDIVTWNTLL---AVFGQNGLDSEVSGVFKEMKRAGFVP 222
G F ++ V E+ P W ++L + +G L E + +++ P
Sbjct: 468 RSGRFEQLKSVISEMPM---KPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIE-----P 519
Query: 223 ERE-TFNTLISAYSRCGSFDQARAVYKRMLEAGVT 256
E T+ T+ + Y+ G +++ + KRM E GVT
Sbjct: 520 ENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVT 554
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 118/534 (22%), Positives = 220/534 (41%), Gaps = 50/534 (9%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M S GL PD L C S ++ ++ ++GL D ++ +Y + R
Sbjct: 107 MFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGR 166
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+A +V +M + +VT ++L+ AY R G LEE + + ++M I+ ++ ++
Sbjct: 167 MGDARKVFDRMSDK----DVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNG 222
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
+LSGF + + A+ +F+++ G P+ T ++++ GD M MG++ Q
Sbjct: 223 ILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEML-NMGRLIHGYVIKQ 281
Query: 185 -CSPDIVTWNTLLAVFGQNGLDSEVSGVFK--EMKRAGFVPERETFNTLISAYSRCGSFD 241
D + ++ ++G++G + +F EM AG N I+ SR G D
Sbjct: 282 GLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVC------NAYITGLSRNGLVD 335
Query: 242 QARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLL 301
+A +++ E + ++ ++ +++A A+ G ++ ++ EM+ KPN VT S+L
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 302 HAYAN-------------------------GKEFEKMNALAEEIYSGKITTHAVLLKTLV 336
A N G M A I +I + + K LV
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV 455
Query: 337 LVNSKFDFLA------EAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFM 390
NS + + E F + + D + ++LS G+ L + K K M
Sbjct: 456 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Query: 391 YES-GFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGK 449
E G L Y+ ++ L R +++ +++E+ EPD + ++ + CR
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEM---PFEPDSCVWGALLNS-CRLQN 571
Query: 450 MTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPD 503
+ I E + TY YAA M+ E + M G K +
Sbjct: 572 NVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKN 625
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/493 (17%), Positives = 201/493 (40%), Gaps = 70/493 (14%)
Query: 82 PSIVTYTSLISAYVRDGLLEEALELKNQMV------EKHIKPDVYTYTTLLSGFVNAKKD 135
P+I +++SLI A + L +++ + ++M + H+ P+++ LS F K+
Sbjct: 79 PTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQI 138
Query: 136 EL-----------------------------AMRVFEEMRTAGCKPNICTFNALIKMYGD 166
A +VF+ M ++ T +AL+ Y
Sbjct: 139 HCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMS----DKDVVTCSALLCAYAR 194
Query: 167 RGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERET 226
+G E+ ++ E+++ +IV+WN +L+ F ++G E +F+++ GF P++ T
Sbjct: 195 KGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVT 254
Query: 227 FNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGG-------LWEQSE 279
++++ + + R ++ +++ G+ D +A++ + G L+ Q E
Sbjct: 255 VSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFE 314
Query: 280 KVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIY----SGKITTHAVLLKTL 335
ME G C +AY G + A E++ + + V ++
Sbjct: 315 M----MEAGVC-----------NAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSI 359
Query: 336 VLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGF 395
+ ++ EA F E + G+ + T+ +ML G + F
Sbjct: 360 IAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHL 419
Query: 396 TLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKR 455
++ ++L+ ++++ S+++ + K +L+ +N ++ + +GK E
Sbjct: 420 LDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK----NLVCWNSLMNGFSMHGKAKEVMS 475
Query: 456 ILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQ-GCKPDQNTYNSIVDWY 514
I + PD +++ + ++ + E + M ++ G KP Y+ +V+
Sbjct: 476 IFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLL 535
Query: 515 CKLHLREEAYNFV 527
+ +EAY+ +
Sbjct: 536 GRAGKLQEAYDLI 548
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/410 (20%), Positives = 169/410 (41%), Gaps = 58/410 (14%)
Query: 160 LIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAG 219
LI Y + F + V + I P I ++++L+ + L ++ GVF M G
Sbjct: 56 LIASYSNYNCFNDADLVLQSIP----DPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHG 111
Query: 220 FVPERETF-----------------------------------NTLISAYSRCGSFDQAR 244
+P+ ++ Y RCG AR
Sbjct: 112 LIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDAR 171
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAY 304
V+ RM + D+ T +A+L A AR G E+ ++LSEME+ + N V+++ +L +
Sbjct: 172 KVFDRMSDK----DVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGF 227
Query: 305 ANGKEFEKMNALAEEIYSGKITTHAVLLKTLV--LVNSKFDFLAEAEHAFLEFKKRGIPH 362
++ + ++I+ V + +++ + +S+ + H ++ K+G+
Sbjct: 228 NRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYV--IKQGLLK 285
Query: 363 DITTLNAMLSLYGRKKLVAKTNKIL-KF-MYESGFTLSLPGYNSLMYLHSRTRNFRKSEM 420
D ++AM+ +YG+ V + +F M E+G N+ + SR K+
Sbjct: 286 DKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVC------NAYITGLSRNGLVDKALE 339
Query: 421 ILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYA 480
+ E+ +E +++S+ +I +NGK EA + EM+ P+ VT + +
Sbjct: 340 MFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACG 399
Query: 481 ANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCK---LHLREEAYNFV 527
+ G ++ + + ++++D Y K ++L + +N +
Sbjct: 400 NIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMM 449
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/270 (19%), Positives = 115/270 (42%), Gaps = 8/270 (2%)
Query: 247 YKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYAN 306
+ R+L++G D ++A+ + + ++ VL + + P ++SSL++A
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPD----PTIYSFSSLIYALTK 93
Query: 307 GKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITT 366
K F + + ++S + + +L L V ++ + G+ D
Sbjct: 94 AKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV 153
Query: 367 LNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREIL 426
+M +Y R + K+ M + ++L+ ++R + IL E+
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMSDKDVVTC----SALLCAYARKGCLEEVVRILSEME 209
Query: 427 EKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFG 486
GIE +++S+N ++ + R+G EA + ++ PD VT ++ + + + M
Sbjct: 210 SSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLN 269
Query: 487 EAIGVVQCMIKQGCKPDQNTYNSIVDWYCK 516
+ +IKQG D+ ++++D Y K
Sbjct: 270 MGRLIHGYVIKQGLLKDKCVISAMIDMYGK 299
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/488 (21%), Positives = 214/488 (43%), Gaps = 48/488 (9%)
Query: 44 GLRPDMVTYNALLDVYGKSRRPKE-AMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEE 102
GL ++ NALL +Y K + + V + + P+ V+YT++I R+ + E
Sbjct: 168 GLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQ----PNEVSYTAVIGGLARENKVLE 223
Query: 103 ALELKNQMVEKHIKPDVYTYTTLLSGFVNAKK-----------DELAMRVFEEMRTAGCK 151
A+++ M EK ++ D + +LS ++A + +EL ++ G
Sbjct: 224 AVQMFRLMCEKGVQVDSVCLSNILS--ISAPREGCDSLSEIYGNELGKQIHCLALRLGFG 281
Query: 152 PNICTFNALIKMY-------GDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGL 204
++ N+L+++Y G +FAEM +V ++V+WN ++ FGQ
Sbjct: 282 GDLHLNNSLLEIYAKNKDMNGAELIFAEMPEV-----------NVVSWNIMIVGFGQEYR 330
Query: 205 DSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNA 264
+ M+ +GF P T +++ A R G + R ++ + + P +S +NA
Sbjct: 331 SDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ----PSVSAWNA 386
Query: 265 VLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGK 324
+L+ + +E++ +M+ KP++ T S +L + A + E + + +
Sbjct: 387 MLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTE 446
Query: 325 ITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTN 384
I+ ++ ++ L+ V S+ + + +E F + DI N+M+S + L K
Sbjct: 447 ISKNSHIVSGLIAVYSECEKMEISECIFDDCINE---LDIACWNSMISGFRHNMLDTKAL 503
Query: 385 KILKFMYESGFTL-SLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYA 443
+ + M+++ + + +++ SR + +++ G D +
Sbjct: 504 ILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDM 563
Query: 444 YCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPD 503
YC+ G++ A++ D + V +N + Y N EA+G+ + MI G KPD
Sbjct: 564 YCKCGEIDSARQFF----DAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPD 619
Query: 504 QNTYNSIV 511
T+ S++
Sbjct: 620 GITFVSVL 627
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/468 (21%), Positives = 202/468 (43%), Gaps = 42/468 (8%)
Query: 110 MVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGM 169
+V +K D Y LL ++ + A +VF+EM ++ ++NA + G
Sbjct: 32 IVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSV----RDVYSWNAFLTFRCKVGD 87
Query: 170 FAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNT 229
E +VF + D+V+WN +++V + G + + V+K M GF+P R T +
Sbjct: 88 LGEACEVFDGMP----ERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 230 LISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGG-LWEQSEKVLSEMENG 288
++SA S+ + ++ G+ ++ NA+L+ A+ G + + +V +
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLS-- 201
Query: 289 RCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNS---KFDFL 345
+PNEV+Y++++ A + + + + + +V L ++ +++ D L
Sbjct: 202 --QPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSL 259
Query: 346 AE------AEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSL 399
+E + + G D+ N++L +Y + K + I M E +++
Sbjct: 260 SEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPE----VNV 315
Query: 400 PGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNE 459
+N ++ + KS L + + G +P+ ++ V+ A R+G + +RI +
Sbjct: 316 VSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSS 375
Query: 460 MKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLH- 518
+ P P V +N ++ Y+ + EAI + M Q KPD+ T + I+ +L
Sbjct: 376 I----PQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRF 431
Query: 519 -----------LREEAYNFVHNLSSLDLHVSEEEKGRLLERIAEKWIN 555
+R E H +S L SE EK + E I + IN
Sbjct: 432 LEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCIN 479
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 117/536 (21%), Positives = 215/536 (40%), Gaps = 61/536 (11%)
Query: 33 ALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLIS 92
A ++F+E+ + D+ ++NA L K EA EV M R +V++ ++IS
Sbjct: 60 ARKVFDEMSV----RDVYSWNAFLTFRCKVGDLGEACEVFDGMPER----DVVSWNNMIS 111
Query: 93 AYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKP 152
VR G E+AL + +MV P +T ++LS MR G
Sbjct: 112 VLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDK 171
Query: 153 NICTFNALIKMYGDRGMFAEMG-KVF----------------------KEIKACQ----- 184
NI NAL+ MY G + G +VF K ++A Q
Sbjct: 172 NIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLM 231
Query: 185 ----CSPDIVTWNTLLAVFG-QNGLD--SEVSG--VFKEMK----RAGFVPERETFNTLI 231
D V + +L++ + G D SE+ G + K++ R GF + N+L+
Sbjct: 232 CEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLL 291
Query: 232 SAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCK 291
Y++ + A ++ M E V ++N ++ + ++S + L+ M + +
Sbjct: 292 EIYAKNKDMNGAELIFAEMPEVNVV----SWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQ 347
Query: 292 PNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHA 351
PNEVT S+L A + E + I ++ +L S ++ EA
Sbjct: 348 PNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGY----SNYEHYEEAISN 403
Query: 352 FLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSR 411
F + + + + D TTL+ +LS R + + +I + + + + + L+ ++S
Sbjct: 404 FRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSE 463
Query: 412 TRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPV-PDVV 470
SE I + + E D+ +N +I + N T+A + M A + P+
Sbjct: 464 CEKMEISECIFDDCIN---ELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNET 520
Query: 471 TYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIVDWYCKLHLREEAYNF 526
++ T +++ + ++K G D ++ D YCK + A F
Sbjct: 521 SFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQF 576
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 140/346 (40%), Gaps = 71/346 (20%)
Query: 2 LMDMKSQGLAPDLCT-FNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYG 60
L M+ G P+ T + L +C R+G + E +F I +P + +NA+L Y
Sbjct: 338 LTRMRDSGFQPNEVTCISVLGACFRSGDV-ETGRRIFSSIP----QPSVSAWNAMLSGYS 392
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKP--- 117
+EA+ +QM+ + P T + ++S+ R LE ++ ++ I
Sbjct: 393 NYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSH 452
Query: 118 -----------------------------DVYTYTTLLSGFVNAKKDELAMRVFEEM-RT 147
D+ + +++SGF + D A+ +F M +T
Sbjct: 453 IVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQT 512
Query: 148 AGCKPNICTFNALIK--------MYGDR--GMFAEMGKV---FKEIKA----CQCS---- 186
A PN +F ++ ++G + G+ + G V F E C+C
Sbjct: 513 AVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDS 572
Query: 187 ----------PDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 236
+ V WN ++ +G NG E G++++M +G P+ TF ++++A S
Sbjct: 573 ARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSH 632
Query: 237 CGSFDQARAVYKRMLEA-GVTPDLSTYNAVLAALARGGLWEQSEKV 281
G + + M G+ P+L Y ++ L R G E +EK+
Sbjct: 633 SGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKL 678
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
Query: 24 CRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPS 83
C+ G + + A + F+ + LR + V +N ++ YG + R EA+ + ++M S G P
Sbjct: 565 CKCGEI-DSARQFFDAV----LRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPD 619
Query: 84 IVTYTSLISAYVRDGLLEEALELKNQMVEKH-IKPDVYTYTTLLSGFVNAKKDELAMRVF 142
+T+ S+++A GL+E LE+ + M H I+P++ Y ++ A + E A ++
Sbjct: 620 GITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLA 679
Query: 143 E 143
E
Sbjct: 680 E 680
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/504 (20%), Positives = 228/504 (45%), Gaps = 61/504 (12%)
Query: 43 AGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEE 102
+G + NA++ +Y K+ R A+ + + + P +V++ +++S + + +
Sbjct: 105 SGFTSFVCVSNAVMGMYRKAGRFDNALCIFENL----VDPDVVSWNTILSGFDDNQI--- 157
Query: 103 ALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIK 162
AL +M + D +TY+T LS V ++ L +++ + G + ++ N+ I
Sbjct: 158 ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFIT 217
Query: 163 MYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNG-LDSEVSGVFKEMKRAGFV 221
MY G F +VF E+ D+++WN+LL+ Q G E +F++M R G
Sbjct: 218 MYSRSGSFRGARRVFDEMSF----KDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVE 273
Query: 222 PERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKV 281
+ +F ++I+ AR ++ ++ G L N +++ ++ G+ E + V
Sbjct: 274 LDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSV 333
Query: 282 LSEME-----------------------NGRCK---PNEVTYSSLLHAYANG---KEFEK 312
+M N R PNEVT+ L++A KE K
Sbjct: 334 FHQMSERNVVSWTTMISSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLK 393
Query: 313 MNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLS 372
++ L I +G ++ +V + + + +KF+ L +A+ AF + R +I + NAM+S
Sbjct: 394 IHGLC--IKTGFVSEPSV-GNSFITLYAKFEALEDAKKAFEDITFR----EIISWNAMIS 446
Query: 373 LYGRKKLVAKTNKILKFMYESGFTLSLPG---YNSLM--YLHSRTRNFRKSEMILREILE 427
+ + +++ LK M+ S ++P + S++ + + ++ + +L+
Sbjct: 447 GFAQNGF---SHEALK-MFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLK 502
Query: 428 KGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGE 487
G+ + + ++ Y + G + E++++ NEM + + + ++ Y+++ F
Sbjct: 503 LGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQ----KNQFVWTSIISAYSSHGDFET 558
Query: 488 AIGVVQCMIKQGCKPDQNTYNSIV 511
+ + MIK+ PD T+ S++
Sbjct: 559 VMNLFHKMIKENVAPDLVTFLSVL 582
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/465 (18%), Positives = 203/465 (43%), Gaps = 37/465 (7%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
MKS G+ D T++T +S C + L+L + GL D+V N+ + +Y +S
Sbjct: 165 MKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGS 224
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLE-EALELKNQMVEKHIKPDVYTYT 123
+ A V +M + ++++ SL+S ++G EA+ + M+ + ++ D ++T
Sbjct: 225 FRGARRVFDEMSFK----DMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFT 280
Query: 124 TLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
++++ + +LA ++ G + + N L+ Y G+ + VF ++
Sbjct: 281 SVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMS-- 338
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQA 243
++V+W T+++ + D VS +F M+ G P TF LI+A +
Sbjct: 339 --ERNVVSWTTMIS----SNKDDAVS-IFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEG 391
Query: 244 RAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
++ ++ G + S N+ + A+ E ++K ++ +++++++
Sbjct: 392 LKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREI----ISWNAMISG 447
Query: 304 YANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHD 363
+A N + E ++ A + S + +A AE ++ +R H
Sbjct: 448 FAQ-------NGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHL 500
Query: 364 I--------TTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNF 415
+ +A+L +Y ++ + ++ K+ M + + + S++ +S +F
Sbjct: 501 LKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFV----WTSIISAYSSHGDF 556
Query: 416 RKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEM 460
+ +++++ + PDL+++ V+ A R G + + I N M
Sbjct: 557 ETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMM 601
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 145/320 (45%), Gaps = 29/320 (9%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVL 72
++ ++ T+IS + ++A+ +F ++ G+ P+ VT+ L++ + + KE +++
Sbjct: 341 NVVSWTTMISSNK-----DDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIH 395
Query: 73 KQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNA 132
GF S I+ Y + EALE + E ++ ++ ++SGF
Sbjct: 396 GLCIKTGFVSEPSVGNSFITLYAK----FEALEDAKKAFEDITFREIISWNAMISGFAQN 451
Query: 133 KKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQC------- 185
A+++F A PN TF +++ FAE V K+ + C
Sbjct: 452 GFSHEALKMFLSA-AAETMPNEYTFGSVLNAIA----FAEDISV-KQGQRCHAHLLKLGL 505
Query: 186 -SPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
S +V+ + LL ++ + G E VF EM + + + ++ISAYS G F+
Sbjct: 506 NSCPVVS-SALLDMYAKRGNIDESEKVFNEMSQ----KNQFVWTSIISAYSSHGDFETVM 560
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEM-ENGRCKPNEVTYSSLLHA 303
++ +M++ V PDL T+ +VL A R G+ ++ ++ + M E +P+ YS ++
Sbjct: 561 NLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDM 620
Query: 304 YANGKEFEKMNALAEEIYSG 323
++ L E+ G
Sbjct: 621 LGRAGRLKEAEELMSEVPGG 640
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/377 (19%), Positives = 146/377 (38%), Gaps = 54/377 (14%)
Query: 147 TAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDS 206
T+G +C NA++ MY G F +F+ + PD+V+WNT+L+ F N +
Sbjct: 104 TSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENL----VDPDVVSWNTILSGFDDNQI-- 157
Query: 207 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVL 266
MK AG V + T++T +S F + +++ G+ DL N+ +
Sbjct: 158 -ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFI 216
Query: 267 AALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKIT 326
+R G + + +V EM + ++++SLL + L++E G
Sbjct: 217 TMYSRSGSFRGARRVFDEMS----FKDMISWNSLL------------SGLSQE---GTFG 257
Query: 327 THAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKI 386
AV++ F + + G+ D + ++++ + + +I
Sbjct: 258 FEAVVI-------------------FRDMMREGVELDHVSFTSVITTCCHETDLKLARQI 298
Query: 387 LKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCR 446
+ G+ L N LM +S+ + + ++ E+ N+V +
Sbjct: 299 HGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSER---------NVVSWTTMI 349
Query: 447 NGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNT 506
+ +A I M+ P+ VT+ + N E + + IK G + +
Sbjct: 350 SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSV 409
Query: 507 YNSIVDWYCKLHLREEA 523
NS + Y K E+A
Sbjct: 410 GNSFITLYAKFEALEDA 426
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 148/304 (48%), Gaps = 23/304 (7%)
Query: 9 GLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEA 68
GL D+ +TL+ EA +LF E++ D + N+++ VY R +A
Sbjct: 348 GLIDDIVVASTLLDMYSKCGSPMEACKLFSEVE----SYDTILLNSMIKVYFSCGRIDDA 403
Query: 69 MEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSG 128
V +++E++ S++++ S+ + + ++G E LE +QM + + D + ++++S
Sbjct: 404 KRVFERIENK----SLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISA 459
Query: 129 FVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPD 188
+ EL +VF G + ++LI +Y G +VF + D
Sbjct: 460 CASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTM----VKSD 515
Query: 189 IVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQARAVYK 248
V WN++++ + NG E +FK+M AG P + TF +++A + CG ++ R +++
Sbjct: 516 EVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFE 575
Query: 249 RM-LEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVT---YSSLLHA- 303
M ++ G PD ++ ++ LAR G E++ ++ EM P +V +SS+L
Sbjct: 576 SMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEM------PFDVDGSMWSSILRGC 629
Query: 304 YANG 307
ANG
Sbjct: 630 VANG 633
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 118/548 (21%), Positives = 220/548 (40%), Gaps = 104/548 (18%)
Query: 40 IKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGL 99
+K L ++ N LL +Y +S + A + +M R + ++ ++I Y+ G
Sbjct: 53 LKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNY----FSWNTMIEGYMNSGE 108
Query: 100 LEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNA 159
+L + M E+ D Y++ ++SGF A + +A R+F M + ++ T N+
Sbjct: 109 KGTSLRFFDMMPER----DGYSWNVVVSGFAKAGELSVARRLFNAMP----EKDVVTLNS 160
Query: 160 LIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSG--VFKEMKR 217
L+ Y G E ++FKE+ S D +T T+L + L++ G + ++
Sbjct: 161 LLHGYILNGYAEEALRLFKELNF---SADAITLTTVLKACAE--LEALKCGKQIHAQILI 215
Query: 218 AGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQ 277
G + + ++L++ Y++CG A MLE PD + +A+++ A G +
Sbjct: 216 GGVECDSKMNSSLVNVYAKCGDLRMA----SYMLEQIREPDDHSLSALISGYANCGRVNE 271
Query: 278 SEKVLSEMENGRCKPNEVTYSSLLHAY-ANGKEFEKM---NALAEEIYSGKITTHAVLLK 333
S + N RC + ++S++ Y AN + E + N + E T AV+
Sbjct: 272 SRGLFDRKSN-RCV---ILWNSMISGYIANNMKMEALVLFNEMRNETREDSRTLAAVINA 327
Query: 334 TLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRK-------KLVAKT--- 383
+ L FL + K G+ DI + +L +Y + KL ++
Sbjct: 328 CIGL-----GFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESY 382
Query: 384 -----NKILKFMYESGF------------TLSLPGYNS--------------LMYLHSRT 412
N ++K + G SL +NS L Y H
Sbjct: 383 DTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMH 442
Query: 413 R-NFRKSEMILREILEK--------------------GIEPDLISYNIVIYAYCRNGKMT 451
+ + E+ L ++ G++ D + + +I YC+ G +
Sbjct: 443 KLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVE 502
Query: 452 EAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQNTYNSIV 511
+R+ + M VP +N+ ++ YA N EAI + + M G +P Q T+ ++
Sbjct: 503 HGRRVFDTMVKSDEVP----WNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVL 558
Query: 512 DW--YCKL 517
YC L
Sbjct: 559 TACNYCGL 566
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 112/522 (21%), Positives = 213/522 (40%), Gaps = 101/522 (19%)
Query: 13 DLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVL 72
D+ T N+L+ EEAL LF+E+ + D +T +L + K ++
Sbjct: 154 DVVTLNSLLHGYILNGYAEEALRLFKELNFSA---DAITLTTVLKACAELEALKCGKQIH 210
Query: 73 KQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNA 132
Q+ G +SL++ Y + G L + + M+E+ +PD ++ + L+SG+ N
Sbjct: 211 AQILIGGVECDSKMNSSLVNVYAKCG----DLRMASYMLEQIREPDDHSLSALISGYANC 266
Query: 133 KKDELAMRVFEEMRTAGCKPNICT--FNALIKMYGDRGMFAEMGKVFKE----------- 179
+ + +F+ K N C +N++I Y M E +F E
Sbjct: 267 GRVNESRGLFDR------KSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETREDSRT 320
Query: 180 ----IKAC------------QCSP-------DIVTWNTLLAVFGQNGLDSEVSGVFKEMK 216
I AC C DIV +TLL ++ + G E +F E++
Sbjct: 321 LAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVE 380
Query: 217 RAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWE 276
+ N++I Y CG D A+ V++R+ L ++N++ ++ G
Sbjct: 381 SYDTI----LLNSMIKVYFSCGRIDDAKRVFERI----ENKSLISWNSMTNGFSQNGCTV 432
Query: 277 QSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLV 336
++ + +M +EV+ SS++ A A+ E L E++++ T+V
Sbjct: 433 ETLEYFHQMHKLDLPTDEVSLSSVISACASISSLE----LGEQVFA---------RATIV 479
Query: 337 LVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFT 396
G+ D ++++ LY + V ++ M +S
Sbjct: 480 ----------------------GLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSD-- 515
Query: 397 LSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYA--YCRNGKMTEAK 454
+P +NS++ ++ ++ + +++ GI P I++ +V+ A YC G + E +
Sbjct: 516 -EVP-WNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYC--GLVEEGR 571
Query: 455 RILNEMK-DPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCM 495
++ MK D VPD ++ V A EAI +V+ M
Sbjct: 572 KLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEM 613
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/487 (18%), Positives = 206/487 (42%), Gaps = 31/487 (6%)
Query: 48 DMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELK 107
D+VT N+LL Y + +EA+ + K++ F +T T+++ A L+ ++
Sbjct: 154 DVVTLNSLLHGYILNGYAEEALRLFKELN---FSADAITLTTVLKACAELEALKCGKQIH 210
Query: 108 NQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDR 167
Q++ ++ D ++L++ + +A + E++R +P+ + +ALI Y +
Sbjct: 211 AQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIR----EPDDHSLSALISGYANC 266
Query: 168 GMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETF 227
G E +F K+ +C ++ WN++++ + N + E +F EM+ RE
Sbjct: 267 GRVNESRGLFDR-KSNRC---VILWNSMISGYIANNMKMEALVLFNEMRN----ETREDS 318
Query: 228 NTLISAYSRC---GSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSE 284
TL + + C G + + ++ + G+ D+ + +L ++ G ++ K+ SE
Sbjct: 319 RTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSE 378
Query: 285 MENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLVLVNSKFDF 344
+E+ + + +S++ Y + + + E I + + + + S+
Sbjct: 379 VES----YDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGF----SQNGC 430
Query: 345 LAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMYESGFTLSLPGYNS 404
E F + K +P D +L++++S + ++ G +S
Sbjct: 431 TVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSS 490
Query: 405 LMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYCRNGKMTEAKRILNEMKDPA 464
L+ L+ + R + + ++ D + +N +I Y NG+ EA + +M
Sbjct: 491 LIDLYCKCGFVEHG----RRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAG 546
Query: 465 PVPDVVTYNTFVATYAANSMFGEAIGVVQCM-IKQGCKPDQNTYNSIVDWYCKLHLREEA 523
P +T+ + + E + + M + G PD+ ++ +VD + EEA
Sbjct: 547 IRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEA 606
Query: 524 YNFVHNL 530
N V +
Sbjct: 607 INLVEEM 613
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 106/256 (41%), Gaps = 11/256 (4%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M L D + +++IS C + S E ++F + GL D V ++L+D+Y K
Sbjct: 441 MHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGF 500
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+ V M P + S+IS Y +G EA++L +M I+P T+
Sbjct: 501 VEHGRRVFDTMVKSDEVP----WNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMV 556
Query: 125 LLSGFVNAKKDELAMRVFEEMRT-AGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKAC 183
+L+ E ++FE M+ G P+ F+ ++ + G E + +E+
Sbjct: 557 VLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPF- 615
Query: 184 QCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISA-YSRCGSFDQ 242
D W+++L NG + G K PE +SA ++ G ++
Sbjct: 616 --DVDGSMWSSILRGCVANGY--KAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWES 671
Query: 243 ARAVYKRMLEAGVTPD 258
+ V K M E VT +
Sbjct: 672 SALVRKLMRENNVTKN 687
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 131/601 (21%), Positives = 237/601 (39%), Gaps = 96/601 (15%)
Query: 2 LMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGL-RPDMVTYNALLDVYG 60
L + QG+ +L+ C ++ + +K+ G RP+ + N L+ +Y
Sbjct: 34 LESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYM 93
Query: 61 KSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVY 120
K +P +A +V QM R ++ ++ +++S YV+ G+L A + + M E+ DV
Sbjct: 94 KCGKPIDACKVFDQMHLR----NLYSWNNMVSGYVKSGMLVRARVVFDSMPER----DVV 145
Query: 121 TYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNAL-------------------- 160
++ T++ G+ A+ ++E R +G K N +F L
Sbjct: 146 SWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQV 205
Query: 161 ---------------IKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQNGLD 205
I Y G + F E+ DI W TL++ + + G
Sbjct: 206 LVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTV----KDIHIWTTLISGYAKLGDM 261
Query: 206 SEVSGVFKEMKRAGFVPERE--TFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYN 263
+F EM PE+ ++ LI+ Y R GS ++A ++++M+ GV P+ T++
Sbjct: 262 EAAEKLFCEM------PEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFS 315
Query: 264 AVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSG 323
+ L A A +++ M +PN + SSL+ Y+ E +E ++
Sbjct: 316 SCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEA----SERVFRI 371
Query: 324 KITTH-AVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAK 382
H V T++ ++ +A + K + + TTL +L+ LV +
Sbjct: 372 CDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEE 431
Query: 383 TNKILKFM-YESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVI 441
+ + M + G Y L+ L R F++ ++R+I E EPD +N I
Sbjct: 432 GLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKE---LMRKIEEMPFEPDKHIWN-AI 487
Query: 442 YAYCR-NGKMTEAKRILNEMK--DPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQ 498
CR +G K+ +E+ DP + ++ A + + + GV+
Sbjct: 488 LGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVM------ 541
Query: 499 GCKPDQNTYNSIVDWY--------------CKLHLR-EEAYNFVHNLSSLDLHVSEEEKG 543
K + V W H R EE Y +HNL++ V EEE
Sbjct: 542 --KKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLAA----VIEEEAS 595
Query: 544 R 544
R
Sbjct: 596 R 596
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/451 (19%), Positives = 191/451 (42%), Gaps = 24/451 (5%)
Query: 84 IVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFE 143
I S +S + L +A+ + ++ I+ +LL + K + +
Sbjct: 11 ICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHR 70
Query: 144 EMRTAGCK-PNICTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLLAVFGQN 202
++ G K PN N LI MY G + KVF ++ ++ +WN +++ + ++
Sbjct: 71 HLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHL----RNLYSWNNMVSGYVKS 126
Query: 203 GLDSEVSGVFKEMKRAGFVPERE--TFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLS 260
G+ VF M PER+ ++NT++ Y++ G+ +A YK +G+ +
Sbjct: 127 GMLVRARVVFDSM------PERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEF 180
Query: 261 TYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEI 320
++ +L A + + + + ++ N V S++ AYA + E +E+
Sbjct: 181 SFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEM 240
Query: 321 YSGKITTHAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLV 380
I + TL+ +K + AE F E ++ + + A+++ Y R+
Sbjct: 241 TVKDIH----IWTTLISGYAKLGDMEAAEKLFCEMPEK----NPVSWTALIAGYVRQGSG 292
Query: 381 AKTNKILKFMYESGFTLSLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIV 440
+ + + M G ++S + + + R + I ++ + P+ I + +
Sbjct: 293 NRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSL 352
Query: 441 IYAYCRNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGC 500
I Y ++G + ++R+ D D V +NT ++ A + + +A+ ++ MIK
Sbjct: 353 IDMYSKSGSLEASERVFRICDDKH---DCVFWNTMISALAQHGLGHKALRMLDDMIKFRV 409
Query: 501 KPDQNTYNSIVDWYCKLHLREEAYNFVHNLS 531
+P++ T I++ L EE + +++
Sbjct: 410 QPNRTTLVVILNACSHSGLVEEGLRWFESMT 440
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 116/546 (21%), Positives = 220/546 (40%), Gaps = 56/546 (10%)
Query: 1 MLMDMKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTY-NALLDVY 59
+L M+ +A D F L+ C EE +++ I L+ + V NA L ++
Sbjct: 81 LLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYS-IALSSMSSLGVELGNAFLAMF 139
Query: 60 GKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVE-KHIKPD 118
+ +A V +M R ++ ++ L+ Y + G +EA+ L ++M+ +KPD
Sbjct: 140 VRFGNLVDAWYVFGKMSER----NLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPD 195
Query: 119 VYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFK 178
VYT+ +L V + G + +I NALI MY G +F
Sbjct: 196 VYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFD 255
Query: 179 EIKACQCSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 238
+ DI++WN +++ + +NG+ E +F M+ P+ T ++ISA G
Sbjct: 256 RMP----RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 239 SFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEME------------ 286
R ++ ++ G D+S N++ G W ++EK+ S ME
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMIS 371
Query: 287 -------------------NGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITT 327
KP+E+T +++L A A + + L + ++ +
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431
Query: 328 HAVLLKTLVLVNSKFDFLAEAEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKIL 387
+ ++ L+ + SK + +A F ++ + T++ A L L R + L
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIPRKNVI-SWTSIIAGLRLNNR------CFEAL 484
Query: 388 KFMYESGFTL--SLPGYNSLMYLHSRTRNFRKSEMILREILEKGIEPDLISYNIVIYAYC 445
F+ + TL + + + +R + I +L G+ D N ++ Y
Sbjct: 485 IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYV 544
Query: 446 RNGKMTEAKRILNEMKDPAPVPDVVTYNTFVATYAANSMFGEAIGVVQCMIKQGCKPDQN 505
R G+M A N K DV ++N + Y+ + + M+K +PD+
Sbjct: 545 RCGRMNTAWSQFNSQK-----KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEI 599
Query: 506 TYNSIV 511
T+ S++
Sbjct: 600 TFISLL 605
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 129/299 (43%), Gaps = 13/299 (4%)
Query: 5 MKSQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRR 64
M + PD T ++S C + +EL + A L ++ N L+++Y K +
Sbjct: 389 MDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKC 448
Query: 65 PKEAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTT 124
+A+++ + + +++++TS+I+ + EAL QM + ++P+ T T
Sbjct: 449 IDKALDIFHNIPRK----NVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNAITLTA 503
Query: 125 LLSGFVNAKKDELAMRVFEEMRTAGCKPNICTFNALIKMYGDRGMFAEMGKVFKEIKACQ 184
L+ + + G + NAL+ MY G F K
Sbjct: 504 ALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK--- 560
Query: 185 CSPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFDQAR 244
D+ +WN LL + + G S V +F M ++ P+ TF +L+ S+ Q
Sbjct: 561 --KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGL 618
Query: 245 AVYKRMLEAGVTPDLSTYNAVLAALARGGLWEQSEKVLSEMENGRCKPNEVTYSSLLHA 303
+ +M + GVTP+L Y V+ L R G +++ K + +M P+ + +LL+A
Sbjct: 619 MYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMP---VTPDPAVWGALLNA 674
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/426 (20%), Positives = 175/426 (41%), Gaps = 53/426 (12%)
Query: 7 SQGLAPDLCTFNTLISCCRAGSLYEEALELFEEIKLAGLRPDMVTYNALLDVYGKSRRPK 66
+ G A D+ N+L + EA +LF ++ R D+V++ ++ Y + P
Sbjct: 325 TTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRME----RKDIVSWTTMISGYEYNFLPD 380
Query: 67 EAMEVLKQMESRGFPPSIVTYTSLISAYVRDGLLEEALELKNQMVEKHIKPDVYTYTTLL 126
+A++ + M+ P +T +++SA G L+ +EL ++ + V L+
Sbjct: 381 KAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLI 440
Query: 127 SGFVNAKKDELAMRVFEEMR----------TAGCKPNICTFNALI-------KMYGDRGM 169
+ + K + A+ +F + AG + N F ALI + +
Sbjct: 441 NMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAIT 500
Query: 170 FAEMGKVFKEIKACQCSPDIVTW-------------NTLLAVFGQNGLDSEVSGVFKEMK 216
I A C +I N LL ++ + G + F K
Sbjct: 501 LTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK 560
Query: 217 RAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPDLSTYNAVLAALARGGLWE 276
+ + ++N L++ YS G ++ RM+++ V PD T+ ++L ++ +
Sbjct: 561 K-----DVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVR 615
Query: 277 QSEKVLSEMENGRCKPNEVTYSSLLHAYANGKEFEKMNALAEEIYSGKITTHAVLLKTLV 336
Q S+ME+ PN Y+ ++ E ++ + +++ +T + L+
Sbjct: 616 QGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKM---PVTPDPAVWGALL 672
Query: 337 ---LVNSKFDFLAE--AEHAFLEFKKRGIPHDITTLNAMLSLYGRKKLVAKTNKILKFMY 391
++ K D L E A+H F E K+ + + I N + + G+ + VAK +++K
Sbjct: 673 NACRIHHKID-LGELSAQHIF-ELDKKSVGYYILLCN-LYADCGKWREVAKVRRMMK--- 726
Query: 392 ESGFTL 397
E+G T+
Sbjct: 727 ENGLTV 732
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 19/229 (8%)
Query: 35 ELFEEIKLAGLRPDMVTYNALLDVYGKSRRPKEAMEVLKQMESRGFPPSIVTYTSLISAY 94
E+ + G+ D NALLD+Y + R A Q S+ + ++ L++ Y
Sbjct: 519 EIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWS---QFNSQ--KKDVTSWNILLTGY 573
Query: 95 VRDGLLEEALELKNQMVEKHIKPDVYTYTTLLSGFVNAKKDELAMRVFEEMRTAGCKPNI 154
G +EL ++MV+ ++PD T+ +LL G ++ + F +M G PN+
Sbjct: 574 SERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNL 633
Query: 155 CTFNALIKMYGDRGMFAEMGKVFKEIKACQCSPDIVTWNTLL-AVFGQNGLD-SEVSG-- 210
+ ++ + G G E+ + K I+ +PD W LL A + +D E+S
Sbjct: 634 KHYACVVDLLGRAG---ELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQH 690
Query: 211 VFK-EMKRAGFVPERETFNTLISAYSRCGSFDQARAVYKRMLEAGVTPD 258
+F+ + K G+ + L + Y+ CG + + V + M E G+T D
Sbjct: 691 IFELDKKSVGY------YILLCNLYADCGKWREVAKVRRMMKENGLTVD 733