Miyakogusa Predicted Gene
- Lj5g3v2110860.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2110860.2 Non Chatacterized Hit- tr|I1L1I4|I1L1I4_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,26.7,1e-18,PPR,Pentatricopeptide repeat; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; PPR: pentatricopeptid,CUFF.56673.2
(399 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 1e-83
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 2e-82
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 300 9e-82
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 295 3e-80
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 3e-80
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 5e-78
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 283 2e-76
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 1e-75
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 4e-75
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 6e-75
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 277 7e-75
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 6e-74
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 9e-74
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 3e-70
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 261 4e-70
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 257 9e-69
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 257 1e-68
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 1e-68
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 254 6e-68
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 250 1e-66
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 2e-65
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 1e-63
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 3e-63
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 6e-63
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 229 2e-60
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 2e-59
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 221 8e-58
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 221 9e-58
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 1e-56
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 5e-56
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 214 7e-56
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 214 7e-56
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 209 2e-54
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 205 4e-53
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 3e-52
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 4e-52
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 4e-52
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 201 6e-52
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 1e-51
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 7e-51
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 7e-51
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 4e-50
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 6e-50
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 194 8e-50
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 2e-49
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 2e-49
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 2e-49
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 3e-49
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 7e-49
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 1e-48
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 188 6e-48
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 7e-48
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 1e-47
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 4e-47
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 2e-46
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 182 5e-46
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 6e-46
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 6e-46
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 6e-46
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 7e-46
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 180 1e-45
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 1e-45
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 180 1e-45
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 4e-45
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 2e-44
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 174 9e-44
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 173 2e-43
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 172 3e-43
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 2e-42
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 2e-42
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 3e-42
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 169 4e-42
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 8e-42
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 8e-42
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 8e-42
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 167 1e-41
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 167 1e-41
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 166 3e-41
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 166 3e-41
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 4e-41
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 2e-40
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 162 3e-40
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 9e-40
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 1e-39
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 2e-39
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 2e-39
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 159 4e-39
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 1e-38
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 2e-38
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 4e-38
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 2e-37
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 4e-37
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 4e-37
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 4e-37
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 7e-37
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 2e-36
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 149 2e-36
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 149 3e-36
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 4e-36
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 148 6e-36
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 9e-36
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 147 9e-36
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 1e-35
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 1e-35
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 1e-35
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 146 2e-35
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 4e-35
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 5e-35
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 5e-35
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 145 5e-35
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 2e-34
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 142 4e-34
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 6e-34
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 7e-34
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 141 8e-34
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 3e-33
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 5e-33
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 6e-33
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 1e-32
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 1e-32
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 137 1e-32
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 1e-32
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 2e-32
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 136 3e-32
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 3e-32
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 4e-32
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 2e-31
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 3e-31
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 3e-31
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 3e-31
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 3e-31
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 3e-31
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 4e-31
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 5e-31
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 5e-31
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 7e-31
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 1e-30
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 5e-30
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 6e-30
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 6e-30
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 127 1e-29
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 2e-29
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 3e-29
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 3e-29
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 3e-29
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 4e-29
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 125 4e-29
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 4e-29
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 4e-29
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 125 5e-29
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 9e-29
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 5e-28
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 1e-27
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 119 3e-27
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 6e-27
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 117 1e-26
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 117 1e-26
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 2e-26
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 3e-26
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 4e-26
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 2e-25
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 3e-25
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 4e-25
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 4e-25
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 4e-25
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 7e-25
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 4e-24
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 6e-24
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 6e-24
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 8e-24
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 107 2e-23
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 4e-23
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 6e-23
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 105 6e-23
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 9e-23
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 2e-22
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 2e-22
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 3e-22
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 101 1e-21
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 1e-21
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 100 3e-21
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 99 8e-21
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 8e-21
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 9e-21
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 9e-21
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 1e-20
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 2e-20
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 3e-20
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 3e-20
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 96 6e-20
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 96 6e-20
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 7e-20
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 1e-19
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 94 2e-19
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 3e-19
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 92 5e-19
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 92 6e-19
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 7e-19
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 8e-19
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 1e-18
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 90 2e-18
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 90 3e-18
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 89 4e-18
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 4e-18
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 5e-18
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 5e-18
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 7e-18
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 88 1e-17
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 1e-17
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 7e-17
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 7e-17
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 9e-17
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 1e-16
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 84 2e-16
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 82 5e-16
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 8e-16
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 82 9e-16
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 81 1e-15
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 81 1e-15
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 1e-15
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 81 1e-15
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 80 2e-15
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 4e-15
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 5e-15
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 79 7e-15
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 79 7e-15
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 7e-15
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 8e-15
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 78 8e-15
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 78 9e-15
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 9e-15
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 9e-15
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 9e-15
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 78 1e-14
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 4e-14
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 75 6e-14
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 8e-14
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 75 9e-14
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 74 1e-13
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 74 2e-13
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 74 2e-13
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 74 2e-13
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 73 3e-13
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 73 3e-13
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 5e-13
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 72 5e-13
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 72 6e-13
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 72 9e-13
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 71 1e-12
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 9e-12
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 1e-11
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 1e-11
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 1e-11
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 67 3e-11
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 67 3e-11
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 5e-11
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 6e-11
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 65 1e-10
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 64 1e-10
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 64 1e-10
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 3e-10
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 62 7e-10
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 56 4e-08
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 54 1e-07
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G46870.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 52 1e-06
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 306 bits (785), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 242/397 (60%), Gaps = 35/397 (8%)
Query: 18 ADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTI 77
ADDAV +F +++ P P +I+FN++ +++ K K Y ++L Q++ GI+ I+TL+I
Sbjct: 69 ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCL------------------ 119
+INC+C +++ AFS + KI+K GY PDT+ F TL+ GLCL
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 120 -----------------NGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAAL 162
NG+V A+ D +V GF+ ++VTY ++N +CK GQT A+
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 163 QLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGF 222
+L+R+++ + +K D Y+III CKD + +A+NL++EM + D+ TYN LI GF
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 223 CIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDI 282
C + + KLL +M+ + I P+ TF++L+D+ KEG ++EA +L MM++G+ P+
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 283 ITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAE 342
ITYNSL+DG+C + + +A + + M +G P++ +++I+ING CK ++D+ L L E
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428
Query: 343 MDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
M + +I +TVTY++L+ G C+SG++ A +L +++
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMV 465
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 195/355 (54%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A+ + +R++ M P +I N ++ L A+ L ++ TG P+ T ++
Sbjct: 176 EALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVL 235
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
N C Q A +L K+ +R + D + ++ ++ GLC +G + A + + +GF+
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 295
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
D +TY LI G C G+ +L+R + + + P+V ++++I SF K+ + +A L
Sbjct: 296 ADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQL 355
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
EM+ R + P+ TYN+LI GFC ++L+EA +++D M++K PD TFNIL++ K
Sbjct: 356 LKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCK 415
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
+ + + M +GV + +TYN+L+ G+C ++ AK +F M R + P++ S
Sbjct: 416 ANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVS 475
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
Y I+++GLC ++++AL + +++ + D Y +I G+C + +V AW+L
Sbjct: 476 YKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDL 530
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 182/341 (53%)
Query: 38 IEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAK 97
++++ I+ L K A +L ++++ G DI T LI +CN + +L
Sbjct: 264 VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRD 323
Query: 98 ILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQ 157
++KR P+ +TF+ L+ G+++ A Q ++ +G + +TY LI+G CK +
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 158 TRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNA 217
A+Q++ + + PD+ + I+I+ +CK + D L+ EM R V+ + TYN
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 218 LIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQG 277
L+ GFC +L+ A KL EMV++ + PD ++ IL+D L G +++A + + K
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 278 VKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEAL 337
++ DI Y ++ G C S+V+ A D+F S+P +G+ + +Y+IMI+ LC+ + +A
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKAD 563
Query: 338 NLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
L +M + PD +TY+ LI + A EL++++
Sbjct: 564 ILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEM 604
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 176/354 (49%), Gaps = 1/354 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D+A ++FN + II +N ++ + L + ISP++ T ++L
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVL 339
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ + + ++ A +L ++++RG P+TIT+ +L+ G C +++ A+Q D ++++G
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D +T+ ILING CK + L+L R++ + V + Y ++ FC+ + A
Sbjct: 400 DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKK 459
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L+ EM++RRV PD+ +Y L+ G C +L++A ++ ++ + D + I++ +
Sbjct: 460 LFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
V +A + + +GVK D YN ++ C ++KA +F M + G AP+
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDEL 579
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAW 372
+Y+I+I A L+ EM D T +I+ L SG + ++
Sbjct: 580 TYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML-SSGELDKSF 632
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 165/336 (49%), Gaps = 3/336 (0%)
Query: 9 NSLPPSIRNA---DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDF 65
N+L NA DD + +++ +P ++ F+ ++ S VK A L ++
Sbjct: 302 NTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ 361
Query: 66 TGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQT 125
GI+P+ T LI+ +C + ++ A ++ ++ +G PD +TF L+ G C ++
Sbjct: 362 RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDD 421
Query: 126 ALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIH 185
L+ + +G + VTY L+ G C+ G+ A +L +++ + V+PD+ Y I++
Sbjct: 422 GLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLD 481
Query: 186 SFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHP 245
C + + A ++ ++ ++ D+ Y +I+G C S++ +A L + K +
Sbjct: 482 GLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKL 541
Query: 246 DAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIF 305
DA +NI++ L ++ ++ +A + M ++G PD +TYN L+ + + A ++
Sbjct: 542 DARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELI 601
Query: 306 NSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLA 341
M G +V + ++IN L + L++L+
Sbjct: 602 EEMKSSGFPADVSTVKMVINMLSSGELDKSFLDMLS 637
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 302 bits (774), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 140/397 (35%), Positives = 241/397 (60%), Gaps = 35/397 (8%)
Query: 18 ADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTI 77
ADDA+ +F ++ P P +I+F+++ +++ K K Y ++L Q++ GI+ +++TL+I
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
+INC+C ++ AFS + KI+K GY P+TITF+TL+ GLCL G+V AL+ D +V G
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 138 FRLDQVTYRILINGLC-----------------------------------KMGQTRAAL 162
+ D +T L+NGLC K GQT A+
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 163 QLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGF 222
+L+R+++ + +K D Y+III CK + +A+NL++EM + + ++ TYN LI GF
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 223 CIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDI 282
C + + KLL +M+ + I+P+ TF++L+D+ KEG ++EA+ + M+ +G+ PD
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 283 ITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAE 342
ITY SL+DG+C + ++KA + + M +G PN+ +++I+ING CK ++D+ L L +
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Query: 343 MDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
M + ++ DTVTY++LI G C+ G+++ A EL +++
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMV 465
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 194/355 (54%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A+ + +R++ M P +I N ++ L A+ L ++ G P+ T ++
Sbjct: 176 EALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVL 235
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
N C Q A +L K+ +R + D + ++ ++ GLC +G + A + + +G
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGIT 295
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
+ +TY ILI G C G+ +L+R + + + P+V ++++I SF K+ + +A L
Sbjct: 296 TNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEEL 355
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+ EM+ R + PD TY +LI GFC + L +A +++D MV+K P+ TFNIL++ K
Sbjct: 356 HKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCK 415
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
+ + + M +GV D +TYN+L+ G+C + ++N AK++F M R + PN+ +
Sbjct: 416 ANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVT 475
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
Y I+++GLC + ++AL + +++ + D Y+ +I G+C + +V AW+L
Sbjct: 476 YKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 530
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 185/341 (54%)
Query: 38 IEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAK 97
++++ I+ L K A +L ++++ GI+ +I T ILI +CN + +L
Sbjct: 264 VKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRD 323
Query: 98 ILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQ 157
++KR P+ +TF+ L+ G+++ A + H ++ +G D +TY LI+G CK
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 383
Query: 158 TRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNA 217
A Q++ + + P++ + I+I+ +CK + D L+ +M R V+ D TYN
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 218 LIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQG 277
LI GFC + +L A +L EMV++ + P+ T+ IL+D L G ++A + + K
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 278 VKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEAL 337
++ DI YN ++ G C S+V+ A D+F S+P +G+ P V +Y+IMI GLCK + EA
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Query: 338 NLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
L +M+ PD TY+ LI G + + +L++++
Sbjct: 564 LLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 180/354 (50%), Gaps = 1/354 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D+A ++FN + T II +N ++ + L + I+P++ T ++L
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ + + ++ A + +++ RG PDTIT+T+L+ G C + A Q D +V++G
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ T+ ILING CK + L+L R++ + V D Y +I FC+ ++ A
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L+ EM++R+V P++ TY L+ G C + ++A ++ +++ + D +NI++ +
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 519
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
V +A + + +GVKP + TYN ++ G C +++A+ +F M + G AP+
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGW 579
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAW 372
+Y+I+I +++ L+ E+ D T +ID L GR+ ++
Sbjct: 580 TYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML-SDGRLKKSF 632
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 158/323 (48%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
DD + +++ P ++ F+ ++ S VK A L ++ GI+PD T T L
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ +C + + A ++ ++ +G P+ TF L+ G C ++ L+ + +G
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D VTY LI G C++G+ A +L +++ + V P++ Y I++ C + A
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALE 494
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
++ ++ ++ D+ YN +I+G C S++ +A L + K + P T+NI++ L
Sbjct: 495 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC 554
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
K+G + EA+ + M + G PD TYN L+ + + K+ + + + G + +
Sbjct: 555 KKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDAS 614
Query: 319 SYSIMINGLCKTKKVDEALNLLA 341
+ ++I+ L + L++L+
Sbjct: 615 TIKMVIDMLSDGRLKKSFLDMLS 637
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 300 bits (769), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 152/419 (36%), Positives = 242/419 (57%), Gaps = 41/419 (9%)
Query: 2 SSFLRLKNSLPPSIRNA------DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPT 55
SS K S +RN +DA+ +F +++ P P I+FN++ +++ + K Y
Sbjct: 29 SSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDL 88
Query: 56 AISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTL-- 113
+ ++ GI D++T+TI+INCYC + ++ AFSVL + K GY PDTITF+TL
Sbjct: 89 VLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVN 148
Query: 114 ---------------------------------MKGLCLNGQVQTALQFHDHVVAQGFRL 140
+ GLCL G+V AL D +V GF+
Sbjct: 149 GFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQP 208
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
D+VTY ++N LCK G + AL L R+++ + +K V Y+I+I S CKD DA +L+
Sbjct: 209 DEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLF 268
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
+EM + + DV TY++LI G C + + K+L EM+ +NI PD TF+ L+D KE
Sbjct: 269 NEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKE 328
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSY 320
G + EAK + M+ +G+ PD ITYNSL+DG+C + +++A +F+ M +G P++ +Y
Sbjct: 329 GKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTY 388
Query: 321 SIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
SI+IN CK K+VD+ + L E+ K +IP+T+TY++L+ G C+SG+++ A EL +++
Sbjct: 389 SILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 447
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 193/355 (54%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+AV++ +R++ M P ++ + ++ L A+ L ++ G PD T ++
Sbjct: 158 EAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVL 217
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
N C A + K+ +R + + ++ ++ LC +G AL + + +G +
Sbjct: 218 NRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIK 277
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
D VTY LI GLC G+ +++R++ G+ + PDV ++ +I F K+ + +A L
Sbjct: 278 ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
Y+EM+ R + PD TYN+LI GFC + L EA ++ D MV+K PD T++IL+++ K
Sbjct: 338 YNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 397
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
V + + + +G+ P+ ITYN+L+ G+C ++N AK++F M RG+ P+V +
Sbjct: 398 AKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVT 457
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
Y I+++GLC ++++AL + +M + Y+ +I G+C + +V AW L
Sbjct: 458 YGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSL 512
Score = 205 bits (521), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 197/363 (54%), Gaps = 2/363 (0%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N+ A+ +F ++ + +++++ ++ SL K + A+SL ++++ GI D+ T +
Sbjct: 225 NSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYS 284
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
LI CN + +L +++ R PD +TF+ L+ G++ A + ++ ++ +
Sbjct: 285 SLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR 344
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G D +TY LI+G CK A Q+ + + +PD+ Y+I+I+S+CK K V D
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 404
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
L+ E+ ++ ++P+ TYN L+ GFC +L A +L EMV++ + P T+ IL+D
Sbjct: 405 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
L G + +A + M K + I YN ++ G C S+V+ A +F S+ +G+ P+
Sbjct: 465 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDG-LCKSGRVSHAWELV 375
V +Y++MI GLCK + EA L +M PD TY+ LI L SG +S EL+
Sbjct: 525 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSV-ELI 583
Query: 376 DDV 378
+++
Sbjct: 584 EEM 586
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 159/323 (49%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
DD + ++ + P ++ F+ ++ VK A L +++ GI+PD T L
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ +C + + A + ++ +G PD +T++ L+ C +V ++ + ++G
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ +TY L+ G C+ G+ AA +L +++ + V P V Y I++ C + ++ A
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 476
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
++ +M R+ + YN +I+G C S++ +A L + K + PD T+N+++ L
Sbjct: 477 IFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLC 536
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
K+G++ EA + M + G PD TYN L+ + S + + ++ M G + +
Sbjct: 537 KKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSS 596
Query: 319 SYSIMINGLCKTKKVDEALNLLA 341
+ ++I+ L + L++L+
Sbjct: 597 TIKMVIDMLSDRRLDKSFLDMLS 619
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 295 bits (756), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 131/361 (36%), Positives = 228/361 (63%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
DDA+++F ++R P P +++F++ +++ + K + + QL+ GI+ +I+TL I+
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
INC+C + A+SVL K++K GY PDT TF TL+KGL L G+V A+ D +V G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ D VTY ++NG+C+ G T AL L+R+++ + VK DV Y+ II S C+D + A +
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L+ EM + + V TYN+L+ G C + + LL +MV++ I P+ TFN+L+D
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
KEG ++EA + M+ +G+ P+IITYN+LMDGYC+ + +++A ++ + M + +P++
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+++ +I G C K+VD+ + + + + ++ + VTYS L+ G C+SG++ A EL ++
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 379 I 379
+
Sbjct: 430 V 430
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 199/428 (46%), Gaps = 70/428 (16%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A S+ +++++ P FN ++ L A+ L ++ G PD+ T ++N
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
C + A +L K+ +R + D T++T++ LC +G + A+ + +G +
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
VTY L+ GLCK G+ L++ + + + P+V + +++ F K+ + +A LY
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD-------------- 246
EM+ R + P++ TYN L+ G+C+ ++L EA +LD MV PD
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 247 ---------------------AYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITY 285
A T++ILV + G +K A+ + M+ GV PD++TY
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Query: 286 NSLMDGYCLVSEVNKAKDIFN-----------------------------------SMPQ 310
L+DG C ++ KA +IF S+P
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501
Query: 311 RGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSH 370
+G+ PNV +Y++MI+GLCK + EA LL +M+ P+ TY++LI + G ++
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 561
Query: 371 AWELVDDV 378
+ +L++++
Sbjct: 562 SAKLIEEM 569
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 167/344 (48%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A+S+F + ++ +N ++ L K + L + I P++ T +L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
++ + + ++ A + +++ RG P+ IT+ TLM G C+ ++ A D +V
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D VT+ LI G C + + +++ R I + + + Y+I++ FC+ + A
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L+ EM++ VLPDV TY L+ G C +L++A ++ +++ + + +++ +
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
K G V++A + + +GVKP+++TY ++ G C +++A + M + G APN
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGL 362
+Y+ +I + + + L+ EM D + +ID L
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 295 bits (756), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 138/396 (34%), Positives = 231/396 (58%), Gaps = 35/396 (8%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
DDAV +F + R P P +I+F+++ + + + K Y + L Q++ GI+ +++TL+I+
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
INC C +++ AFS + KI+K GY PDT+TF+TL+ GLCL G+V AL+ D +V G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 139 RLDQVTYRILINGLC-----------------------------------KMGQTRAALQ 163
+ +T L+NGLC K GQT A++
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 164 LMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFC 223
L+R+++ + +K D Y+III CKD + +A+NL++EM + D+ Y LI GFC
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 224 IVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDII 283
+ + KLL +M+ + I PD F+ L+D KEG ++EA+ + M+++G+ PD +
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 284 TYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM 343
TY SL+DG+C ++++KA + + M +G PN+ +++I+ING CK +D+ L L +M
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 344 DCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+ ++ DTVTY++LI G C+ G++ A EL +++
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMV 449
Score = 201 bits (512), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 183/341 (53%)
Query: 38 IEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAK 97
++++ I+ L K A +L ++++ G DI T LI +C + +L
Sbjct: 248 VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRD 307
Query: 98 ILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQ 157
++KR PD + F+ L+ G+++ A + H ++ +G D VTY LI+G CK Q
Sbjct: 308 MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 158 TRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNA 217
A ++ + + P++ + I+I+ +CK L+ D L+ +M R V+ D TYN
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 218 LIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQG 277
LI GFC + +L+ A +L EMV++ + PD ++ IL+D L G ++A + + K
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 278 VKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEAL 337
++ DI YN ++ G C S+V+ A D+F S+P +G+ P+V +Y+IMI GLCK + EA
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547
Query: 338 NLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
L +M+ P+ TY+ LI G + + +L++++
Sbjct: 548 LLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 160/323 (49%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
DD + +++ TP ++ F+ ++ VK A L ++ GISPD T T L
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ +C + Q+ A +L ++ +G P+ TF L+ G C + L+ + +G
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D VTY LI G C++G+ A +L +++ + V+PD+ Y I++ C + A
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
++ ++ ++ D+ YN +I+G C S++ +A L + K + PD T+NI++ L
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
K+G++ EA + M + G P+ TYN L+ + + K+ + + + G + +
Sbjct: 539 KKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAS 598
Query: 319 SYSIMINGLCKTKKVDEALNLLA 341
+ ++++ L + L++L+
Sbjct: 599 TVKMVVDMLSDGRLKKSFLDMLS 621
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 288 bits (736), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 233/391 (59%), Gaps = 36/391 (9%)
Query: 7 LKNSLPPSIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFT 66
L+N L I+ DDAV +F +++ P P I+EFNK+L+++ KM + ISL Q+
Sbjct: 54 LRNRLSDIIK-VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 67 GISPDIFTLTILINCYCNQAQITSAFSVLAKILK-------------------------- 100
GIS D++T +I INC+C ++Q++ A +VLAK++K
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 101 ---------RGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILING 151
GY+PDT TFTTL+ GL L+ + A+ D +V +G + D VTY ++NG
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 152 LCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPD 211
LCK G AL L+++++ ++ DV +Y II CK K + DA NL++EM + + PD
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 212 VFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLA 271
VFTY++LI C + +A++LL +M+ + I+P+ TF+ L+DA KEG + EA+ +
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 272 VMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTK 331
M+K+ + PDI TY+SL++G+C+ +++AK +F M + PNV +YS +I G CK K
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 332 KVDEALNLLAEMDCKNIIPDTVTYSSLIDGL 362
+V+E + L EM + ++ +TVTY++LI G
Sbjct: 413 RVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 196/360 (54%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A+S+ ++ + ++ +N I+ L K KH A++L ++D GI PD+FT + L
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+C CN + + A +L+ +++R P+ +TF+ L+ G++ A + +D ++ +
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D TY LING C + A + + + P+V Y+ +I FCK K V +
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L+ EM R ++ + TY LI+GF A + +MV+ +HP+ T+NIL+D L
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
K G + +A V + + ++PDI TYN +++G C +V ++F ++ +G++PNV
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI 539
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+Y+ MI+G C+ +EA +LL +M +P++ TY++LI + G + EL+ ++
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 212 bits (539), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 194/355 (54%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
DAV++ ++++ M P F ++ L A++L Q+ G PD+ T ++
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
N C + I A S+L K+ K D + + T++ GLC + AL + +G R
Sbjct: 231 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 290
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
D TY LI+ LC G+ A +L+ + + + P+V ++ +I +F K+ + +A L
Sbjct: 291 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
Y EM+ R + PD+FTY++LI GFC+ +L EA + + M++K+ P+ T++ L+ K
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
V+E + M ++G+ + +TY +L+ G+ + + A+ +F M G+ PN+ +
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
Y+I+++GLCK K+ +A+ + + + PD TY+ +I+G+CK+G+V WEL
Sbjct: 471 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWEL 525
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 161/303 (53%)
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
IL N + ++ A + ++K P + F L+ + + + + + +
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G D TY I IN C+ Q AL ++ ++ +PD+ + +++ +C K +SDA
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
L +M+ PD FT+ LI+G + ++ EA L+D+MV + PD T+ +V+
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
L K G++ A ++L M K ++ D++ YN+++DG C ++ A ++F M +GI P+
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
V +YS +I+ LC + +A LL++M + I P+ VT+S+LID K G++ A +L D
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 377 DVI 379
++I
Sbjct: 353 EMI 355
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/400 (35%), Positives = 235/400 (58%), Gaps = 36/400 (9%)
Query: 7 LKNSLPPSIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFT 66
L+N L I+ DDAV +F +++ P P I+EFNK+L+++ KM + ISL Q+
Sbjct: 54 LRNRLSDIIK-VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 67 GISPDIFTLTILINCYCNQAQITSAFSVLAKILK-------------------------- 100
GIS D++T +I INC+C ++Q++ A +VLAK++K
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 101 ---------RGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILING 151
GY+PDT TFTTL+ GL L+ + A+ D +V +G + D VTY ++NG
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 152 LCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPD 211
LCK G AL L+ +++ +K +V ++ II S CK + V A +L++EM + + P+
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Query: 212 VFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLA 271
V TYN+LI C + +A++LL M+ K I+P+ TFN L+DA KEG + EA+ +
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352
Query: 272 VMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTK 331
M+++ + PD ITYN L++G+C+ + +++AK +F M + PN+ +Y+ +ING CK K
Sbjct: 353 EMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK 412
Query: 332 KVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
+V++ + L EM + ++ +TVTY+++I G ++G A
Sbjct: 413 RVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSA 452
Score = 192 bits (487), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 190/355 (53%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
DAV++ ++++ M P F ++ L A++L Q+ G PD+ T ++
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
N C + I A ++L K+ + + + F T++ LC V+ A+ + +G R
Sbjct: 231 NGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIR 290
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
+ VTY LIN LC G+ A +L+ + + + P+V + +I +F K+ + +A L
Sbjct: 291 PNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+ EM+ R + PD TYN LI GFC+ ++L EA ++ MV+K+ P+ T+N L++ K
Sbjct: 351 HEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
V++ + M ++G+ + +TY +++ G+ + + A+ +F M + ++ +
Sbjct: 411 CKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMT 470
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
YSI+++GLC K+D AL + + + + Y+++I+G+CK+G+V AW+L
Sbjct: 471 YSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 190/360 (52%), Gaps = 3/360 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A+++ N++ ++ FN I+ SL K +H A+ L +++ GI P++ T L
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
INC CN + + A +L+ +L++ P+ +TF L+ G++ A + H+ ++ +
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D +TY +LING C + A Q+ + + + P+++ Y +I+ FCK K V D
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L+ EM R ++ + TY +I GF A + +MV+ + D T++IL+ L
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLC 479
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
G + A + + K ++ +I YN++++G C +V +A D+F S+ I P+V
Sbjct: 480 SYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVV 536
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+Y+ MI+GLC + + EA +L +M +P++ TY++LI + + + EL+ ++
Sbjct: 537 TYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEM 596
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 156/303 (51%)
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
IL N + ++ A + ++K P + F L+ + + + + + +
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G D TY I IN C+ Q AL ++ ++ +PD+ + +++ +C K +SDA
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
L +M+ PD FT+ LI+G + ++ EA L+D+MV + PD T+ +V+
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
L K G++ A +L M +K +++ +N+++D C V A D+F M +GI PN
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
V +Y+ +IN LC + +A LL+ M K I P+ VT+++LID K G++ A +L +
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352
Query: 377 DVI 379
++I
Sbjct: 353 EMI 355
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 283 bits (723), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/396 (36%), Positives = 232/396 (58%), Gaps = 35/396 (8%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
DDA+ +F +++ P P I+EFNK+L+++ KMK + ISL ++ I ++T IL
Sbjct: 67 DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNIL 126
Query: 79 INCYCNQAQITSAFSVLAKILK-----------------------------------RGY 103
INC+C ++QI+ A ++L K++K GY
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 104 RPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQ 163
RPDTITFTTL+ GL L+ + A+ D +V +G + + VTY +++NGLCK G T AL
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246
Query: 164 LMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFC 223
L+ +++ ++ DV ++ II S CK + V DA NL+ EM + + P+V TY++LI C
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 224 IVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDII 283
+ +A++LL +M+ K I+P+ TFN L+DA KEG EA+ + M+K+ + PDI
Sbjct: 307 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF 366
Query: 284 TYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM 343
TYNSL++G+C+ ++KAK +F M + P+V +Y+ +I G CK+K+V++ L EM
Sbjct: 367 TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426
Query: 344 DCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+ ++ DTVTY++LI GL G +A ++ ++
Sbjct: 427 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 190/355 (53%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
DAV++ ++++ M P I F ++ L A++L ++ G P++ T +++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
N C + A ++L K+ D + F T++ LC V AL + +G R
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
+ VTY LI+ LC G+ A QL+ + + + P++ + +I +F K+ +A L
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
Y +M+ R + PD+FTYN+L+ GFC+ +L +A ++ + MV+K+ PD T+N L+ K
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
V++ + M +G+ D +TY +L+ G + + A+ +F M G+ P++ +
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 472
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
YSI+++GLC K+++AL + M I D Y+++I+G+CK+G+V W+L
Sbjct: 473 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 527
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 192/362 (53%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
+ D A+++ N++ ++ FN I+ SL K +H A++L +++ GI P++ T +
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
LI+C C+ + + A +L+ ++++ P+ +TF L+ G+ A + +D ++ +
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
D TY L+NG C + A Q+ + + PDV Y +I FCK K V D
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
L+ EM R ++ D TY LI G A K+ +MV+ + PD T++IL+D
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
L G +++A V M K +K DI Y ++++G C +V+ D+F S+ +G+ PN
Sbjct: 480 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 539
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
V +Y+ MI+GLC + + EA LL +M +P++ TY++LI + G + + EL+
Sbjct: 540 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIR 599
Query: 377 DV 378
++
Sbjct: 600 EM 601
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 192/358 (53%)
Query: 18 ADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTI 77
A +AV++ +R+++ P ++ + ++ L K A++L ++++ I D+
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
+I+ C + A ++ ++ +G RP+ +T+++L+ LC G+ A Q ++ +
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
+ VT+ LI+ K G+ A +L + + + PD+ Y +++ FC + A
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
++ M+++ PDV TYN LI GFC ++++ T+L EM + + D T+ L+ L
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
+G+ A+ V M+ GV PDI+TY+ L+DG C ++ KA ++F+ M + I ++
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
+ Y+ MI G+CK KVD+ +L + K + P+ VTY+++I GLC + A+ L+
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 118/270 (43%), Gaps = 70/270 (25%)
Query: 180 YTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMV 239
Y I+ + D + DA L+ M+ R LP + +N L+ + + L ++M
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 240 TKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYC------ 293
I YT+NIL++ + + A +L MMK G +P I+T +SL++GYC
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 294 ----LVSEV----------------------NKAKD---IFNSMPQRGIAPNVHSYSIMI 324
LV ++ NKA + + + M QRG PN+ +Y +++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 325 NGLCKT-----------------------------------KKVDEALNLLAEMDCKNII 349
NGLCK + VD+ALNL EM+ K I
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 350 PDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
P+ VTYSSLI LC GR S A +L+ D+I
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 138/379 (36%), Positives = 227/379 (59%), Gaps = 35/379 (9%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
DDA+ +F +++ P P I EFNK+L+++ KMK + ISL ++ GIS +++T IL
Sbjct: 67 DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNIL 126
Query: 79 INCYCNQAQITSAFSVLAKILK-----------------------------------RGY 103
INC+C ++QI+ A ++L K++K GY
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 104 RPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQ 163
RPDTITFTTL+ GL L+ + A+ D +V +G + + VTY +++NGLCK G A
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246
Query: 164 LMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFC 223
L+ +++ ++ +V +Y+ +I S CK + DA NL++EM + V P+V TY++LI C
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 224 IVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDII 283
+ +A++LL +M+ + I+P+ TFN L+DA KEG + EA+ + M+K+ + PDI
Sbjct: 307 NYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 366
Query: 284 TYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM 343
TY+SL++G+C+ +++AK +F M + PNV +Y+ +ING CK K++DE + L EM
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
Query: 344 DCKNIIPDTVTYSSLIDGL 362
+ ++ +TVTY++LI G
Sbjct: 427 SQRGLVGNTVTYTTLIHGF 445
Score = 184 bits (468), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 176/336 (52%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A ++ N++ ++ ++ ++ SL K +H A++L +++ G+ P++ T + L
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+C CN + + A +L+ +++R P+ +TF L+ G++ A + +D ++ +
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D TY LING C + A + + + P+V Y +I+ FCK K + +
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L+ EM R ++ + TY LI+GF A + +MV+ +HP+ T+N L+D L
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
K G +++A V + + ++P I TYN +++G C +V D+F S+ +G+ P+V
Sbjct: 482 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 541
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVT 354
Y+ MI+G C+ +EA L +M +PD+ T
Sbjct: 542 IYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 162/301 (53%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
R+ DDA+++F + P +I ++ +++ L + + A L + I+P++ T
Sbjct: 274 RHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTF 333
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
LI+ + + ++ A + +++KR PD T+++L+ G C++ ++ A + +++
Sbjct: 334 NALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 393
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
+ + VTY LING CK + ++L R++ + + + YT +IH F + + +
Sbjct: 394 KDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 453
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
A ++ +M++ V P++ TYN L+ G C +L++A + + + + P YT+NI+++
Sbjct: 454 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 513
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
+ K G V++ + + +GVKPD+I YN+++ G+C +A +F M + G P
Sbjct: 514 GMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Query: 316 N 316
+
Sbjct: 574 D 574
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 151/293 (51%)
Query: 87 QITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYR 146
++ A + ++K P F L+ + + + + + G + TY
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 147 ILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLAR 206
ILIN C+ Q AL L+ ++ +P + + +++ +C K +SDA L +M+
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 207 RVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEA 266
PD T+ LI+G + ++ EA L+D MV + P+ T+ ++V+ L K G++ A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 267 KTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMING 326
+L M ++ +++ Y++++D C + A ++F M +G+ PNV +YS +I+
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 327 LCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
LC ++ +A LL++M + I P+ VT+++LID K G++ A +L D++I
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMI 357
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 278 bits (711), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 232/388 (59%), Gaps = 35/388 (9%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
DDAV++F +++ P P I+EF+K+L+++ KM + ISL Q+ GIS +++T +IL
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLC----------LNGQV----- 123
INC+C ++Q++ A +VLAK++K GY PD +T +L+ G C L GQ+
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 124 --------------------QTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQ 163
A+ D +V +G + D VTY I++NGLCK G AL
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 164 LMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFC 223
L+++++ ++P V +Y II + C K V+DA NL++EM + + P+V TYN+LI C
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 224 IVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDII 283
+ +A++LL +M+ + I+P+ TF+ L+DA KEG + EA+ + M+K+ + PDI
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362
Query: 284 TYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM 343
TY+SL++G+C+ +++AK +F M + PNV +Y+ +I G CK K+VDE + L EM
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422
Query: 344 DCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
+ ++ +TVTY++LI G ++ +A
Sbjct: 423 SQRGLVGNTVTYTTLIHGFFQARECDNA 450
Score = 218 bits (555), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 193/355 (54%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
DAVS+ +++ M P FN ++ L + A++L ++ G PD+ T I++
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 228
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
N C + I A S+L K+ + P + + T++ LC V AL + +G R
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
+ VTY LI LC G+ A +L+ + + + P+V ++ +I +F K+ + +A L
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
Y EM+ R + PD+FTY++LI GFC+ +L EA + + M++K+ P+ T+N L+ K
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
V E + M ++G+ + +TY +L+ G+ E + A+ +F M G+ P++ +
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 468
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
YSI+++GLC KV+ AL + + + PD TY+ +I+G+CK+G+V W+L
Sbjct: 469 YSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 191/360 (53%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A+S+ ++ + P ++ +N I+ +L K+ A++L ++D GI P++ T L
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I C CN + + A +L+ +++R P+ +TF+ L+ G++ A + +D ++ +
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D TY LING C + A + + + P+V Y +I FCK K V +
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L+ EM R ++ + TY LI+GF + A + +MV+ + PD T++IL+D L
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
G V+ A V + + ++PDI TYN +++G C +V D+F S+ +G+ PNV
Sbjct: 478 NNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVV 537
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+Y+ M++G C+ +EA L EM + +PD+ TY++LI + G + + EL+ ++
Sbjct: 538 TYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 166/316 (52%), Gaps = 3/316 (0%)
Query: 64 DFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQV 123
DF+G+ D ++I N ++ A ++ ++K P + F+ L+ + +
Sbjct: 41 DFSGVRYDYRKISI---NRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKF 97
Query: 124 QTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTII 183
+ + + G + TY ILIN C+ Q AL ++ ++ +PD+ +
Sbjct: 98 DLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSL 157
Query: 184 IHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNI 243
++ FC +SDA +L +M+ PD FT+N LI+G ++ EA L+D MV K
Sbjct: 158 LNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGC 217
Query: 244 HPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKD 303
PD T+ I+V+ L K G++ A ++L M + ++P ++ YN+++D C VN A +
Sbjct: 218 QPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALN 277
Query: 304 IFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLC 363
+F M +GI PNV +Y+ +I LC + +A LL++M + I P+ VT+S+LID
Sbjct: 278 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 337
Query: 364 KSGRVSHAWELVDDVI 379
K G++ A +L D++I
Sbjct: 338 KEGKLVEAEKLYDEMI 353
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 183/357 (51%), Gaps = 1/357 (0%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
+N +DA+++F + P ++ +N ++ L + A L + I+P++ T
Sbjct: 270 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 329
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
+ LI+ + + ++ A + +++KR PD T+++L+ G C++ ++ A + +++
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 389
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
+ + VTY LI G CK + ++L R++ + + + YT +IH F + + +
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDN 449
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
A ++ +M++ VLPD+ TY+ L+ G C +++ A + + + + PD YT+NI+++
Sbjct: 450 AQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIE 509
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
+ K G V++ + + +GVKP+++TY ++M G+C +A +F M + G P
Sbjct: 510 GMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLP 569
Query: 316 NVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAW 372
+ +Y+ +I + + L+ EM + D T L+ + GR+ ++
Sbjct: 570 DSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVTNMLHDGRLDKSF 625
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 278 bits (710), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 140/396 (35%), Positives = 233/396 (58%), Gaps = 35/396 (8%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
DDAV +F +++ P P I+EFNK+L+++ KM + ISL ++ IS D+++ IL
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPD-------------------------------- 106
INC+C ++Q+ A +VL K++K GY PD
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 107 ---TITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQ 163
T+TF TL+ GL L+ + A+ D +VA+G + D TY ++NGLCK G AL
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 164 LMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFC 223
L+++++ ++ DV +YT II + C K V+DA NL++EM + + P+V TYN+LI C
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 224 IVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDII 283
+ +A++LL +M+ + I+P+ TF+ L+DA KEG + EA+ + M+K+ + PDI
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 284 TYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM 343
TY+SL++G+C+ +++AK +F M + PNV +Y+ +I G CK K+V+E + L EM
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 344 DCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+ ++ +TVTY++LI GL ++G A ++ ++
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Score = 218 bits (555), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 197/355 (55%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+AV++ +++ M P + FN ++ L A++L ++ G PD+FT ++
Sbjct: 168 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 227
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
N C + I A S+L K+ K D + +TT++ LC V AL + +G R
Sbjct: 228 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIR 287
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
+ VTY LI LC G+ A +L+ + + + P+V ++ +I +F K+ + +A L
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
Y EM+ R + PD+FTY++LI GFC+ +L EA + + M++K+ P+ T+N L+ K
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
V+E + M ++G+ + +TYN+L+ G + + A+ IF M G+ P++ +
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
YSI+++GLCK K+++AL + + + PD TY+ +I+G+CK+G+V W+L
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 192/354 (54%)
Query: 18 ADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTI 77
A +AV++ +R++ P + + ++ L K A+SL +++ I D+ T
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 260
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
+I+ CN + A ++ ++ +G RP+ +T+ +L++ LC G+ A + ++ +
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
+ VT+ LI+ K G+ A +L ++ + + PD+ Y+ +I+ FC + +A
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
+++ M+++ P+V TYN LI GFC +++E +L EM + + + T+N L+ L
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
+ G+ A+ + M+ GV PDIITY+ L+DG C ++ KA +F + + + P++
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
++Y+IMI G+CK KV++ +L + K + P+ + Y+++I G C+ G A
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 188/360 (52%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A+S+ ++ + ++ + I+ +L K+ A++L ++D GI P++ T L
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I C CN + + A +L+ +++R P+ +TF+ L+ G++ A + +D ++ +
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D TY LING C + A + + + P+V Y +I FCK K V +
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L+ EM R ++ + TYN LI G A K+ +MV+ + PD T++IL+D L
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
K G +++A V + K ++PDI TYN +++G C +V D+F S+ +G+ PNV
Sbjct: 477 KYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 536
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
Y+ MI+G C+ +EA L EM +P++ TY++LI + G + + EL+ ++
Sbjct: 537 IYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 179/357 (50%), Gaps = 1/357 (0%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
+N +DA+++F + P ++ +N ++ L + A L + I+P++ T
Sbjct: 269 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 328
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
+ LI+ + + ++ A + +++KR PD T+++L+ G C++ ++ A + +++
Sbjct: 329 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 388
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
+ + VTY LI G CK + ++L R++ + + + Y +I +
Sbjct: 389 KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDM 448
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
A ++ +M++ V PD+ TY+ L+ G C +L++A + + + + PD YT+NI+++
Sbjct: 449 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIE 508
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
+ K G V++ + + +GVKP++I Y +++ G+C +A +F M + G P
Sbjct: 509 GMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 568
Query: 316 NVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAW 372
N +Y+ +I + + L+ EM + D T S +I+ L GR+ ++
Sbjct: 569 NSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKSY 624
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 153/293 (52%)
Query: 87 QITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYR 146
++ A + ++++ P + F L+ + + + + + D +Y
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 147 ILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLAR 206
ILIN C+ Q AL ++ ++ +PD+ + +++ +C K +S+A L +M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 207 RVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEA 266
P+ T+N LI+G + ++ EA L+D MV + PD +T+ +V+ L K G++ A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 267 KTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMING 326
++L M K ++ D++ Y +++D C VN A ++F M +GI PNV +Y+ +I
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 327 LCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
LC + +A LL++M + I P+ VT+S+LID K G++ A +L D++I
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 99/186 (53%)
Query: 190 DKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYT 249
D + DA +L+ EM+ R LP + +N L+ +++ L + M I D Y+
Sbjct: 58 DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 117
Query: 250 FNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMP 309
+NIL++ + + A VL MMK G +PDI+T +SL++GYC +++A + + M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 310 QRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVS 369
PN +++ +I+GL K EA+ L+ M + PD TY ++++GLCK G +
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 370 HAWELV 375
A L+
Sbjct: 238 LALSLL 243
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 277 bits (709), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 138/396 (34%), Positives = 234/396 (59%), Gaps = 35/396 (8%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
DDAV++F +++ P P IIEF+K+L+++ KM + ISL Q+ GI + +T +IL
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 79 INCYCNQAQITSAFSVLAKILK-----------------------------------RGY 103
INC+C ++Q+ A +VL K++K GY
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 104 RPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQ 163
+P+T+TF TL+ GL L+ + A+ D +VA+G + D VTY +++NGLCK G T A
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 164 LMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFC 223
L+ +++ ++P V +Y II CK K + DA NL+ EM + + P+V TY++LI C
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 224 IVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDII 283
+ +A++LL +M+ + I+PD +TF+ L+DA KEG + EA+ + M+K+ + P I+
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Query: 284 TYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM 343
TY+SL++G+C+ +++AK +F M + P+V +Y+ +I G CK K+V+E + + EM
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Query: 344 DCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+ ++ +TVTY+ LI GL ++G A E+ +++
Sbjct: 423 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 190/362 (52%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
+ D A ++ N++ + P ++ +N I+ L K KH A++L +++ GI P++ T +
Sbjct: 236 DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
LI+C CN + + A +L+ +++R PD TF+ L+ G++ A + +D +V +
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
VTY LING C + A Q+ + + PDV Y +I FCK K V +
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
++ EM R ++ + TYN LI G A ++ EMV+ + P+ T+N L+D
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
L K G +++A V + + ++P I TYN +++G C +V D+F ++ +G+ P+
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
V +Y+ MI+G C+ +EA L EM +P++ Y++LI + G + EL+
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 595
Query: 377 DV 378
++
Sbjct: 596 EM 597
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 198/394 (50%), Gaps = 35/394 (8%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+AV++ +++ P + FN ++ L A++L ++ G PD+ T +++
Sbjct: 169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV 228
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
N C + AF++L K+ + P + + T++ GLC + AL + +G R
Sbjct: 229 NGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR 288
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
+ VTY LI+ LC G+ A +L+ + + + PDV ++ +I +F K+ + +A L
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD------------- 246
Y EM+ R + P + TY++LI GFC+ +L EA ++ + MV+K+ PD
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 408
Query: 247 ----------------------AYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIIT 284
T+NIL+ L + G+ A+ + M+ GV P+I+T
Sbjct: 409 YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468
Query: 285 YNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMD 344
YN+L+DG C ++ KA +F + + + P +++Y+IMI G+CK KV++ +L +
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528
Query: 345 CKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
K + PD V Y+++I G C+ G A L ++
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 158/296 (53%)
Query: 84 NQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQV 143
++ ++ A ++ +++K P I F+ L+ + + + + + G +
Sbjct: 58 SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHY 117
Query: 144 TYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEM 203
TY ILIN C+ Q AL ++ ++ +P++ + +++ +C K +S+A L +M
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 204 LARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNV 263
P+ T+N LI+G + ++ EA L+D MV K PD T+ ++V+ L K G+
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 264 KEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIM 323
A +L M + ++P ++ YN+++DG C ++ A ++F M +GI PNV +YS +
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 324 INGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
I+ LC + +A LL++M + I PD T+S+LID K G++ A +L D+++
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 274 bits (701), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 133/388 (34%), Positives = 233/388 (60%), Gaps = 35/388 (9%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D+AV +F +++ P P I+EF+K+L+++ KMK + IS +++ G+S +++T I+
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 79 INCYCNQAQITSAFSVLAKILK-----------------------------------RGY 103
INC C ++Q++ A ++L K++K GY
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 104 RPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQ 163
+PDT+TFTTL+ GL + + A+ + +V +G + D VTY +INGLCK G+ AL
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 164 LMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFC 223
L+ +++ ++ DV +Y+ +I S CK + V DA NL++EM + + PDVFTY++LI C
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 224 IVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDII 283
+ +A++LL +M+ + I+P+ TFN L+DA KEG + EA+ + M+++ + P+I+
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346
Query: 284 TYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM 343
TYNSL++G+C+ +++A+ IF M + P+V +Y+ +ING CK KKV + + L +M
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Query: 344 DCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
+ ++ +TVTY++LI G ++ +A
Sbjct: 407 SRRGLVGNTVTYTTLIHGFFQASDCDNA 434
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 197/360 (54%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A+++ N++ + ++ ++ ++ SL K +H A++L ++D GI PD+FT + L
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+C CN + + A +L+ +L+R P+ +TF +L+ G++ A + D ++ +
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ VTY LING C + A Q+ + + PDV Y +I+ FCK K V D
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L+ +M R ++ + TY LI+GF S A + +MV+ +HP+ T+N L+D L
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
K G +++A V + K ++PDI TYN + +G C +V D+F S+ +G+ P+V
Sbjct: 462 KNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 521
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+Y+ MI+G CK +EA L +M +PD+ TY++LI + G + + EL+ ++
Sbjct: 522 AYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 194/355 (54%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+AV++ ++++ M P + F ++ L + A++L ++ G PD+ T +I
Sbjct: 153 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 212
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
N C + + A ++L K+ K D + ++T++ LC V AL + +G R
Sbjct: 213 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIR 272
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
D TY LI+ LC G+ A +L+ + + + P+V + +I +F K+ + +A L
Sbjct: 273 PDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKL 332
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+ EM+ R + P++ TYN+LI GFC+ +L EA ++ MV+K+ PD T+N L++ K
Sbjct: 333 FDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCK 392
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
V + + M ++G+ + +TY +L+ G+ S+ + A+ +F M G+ PN+ +
Sbjct: 393 AKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMT 452
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
Y+ +++GLCK K+++A+ + + + PD TY+ + +G+CK+G+V W+L
Sbjct: 453 YNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDL 507
Score = 191 bits (486), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 189/357 (52%)
Query: 18 ADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTI 77
A +AV++ R++ P ++ + ++ L K A++L ++++ I D+ +
Sbjct: 186 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYST 245
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
+I+ C + A ++ ++ +G RPD T+++L+ LC G+ A + ++ +
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
+ VT+ LI+ K G+ A +L ++ + + P++ Y +I+ FC + +A
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
+++ M+++ LPDV TYN LI GFC ++ + +L +M + + + T+ L+
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
+ + A+ V M+ GV P+I+TYN+L+DG C ++ KA +F + + + P++
Sbjct: 426 FQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI 485
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
++Y+IM G+CK KV++ +L + K + PD + Y+++I G CK G A+ L
Sbjct: 486 YTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 159/315 (50%), Gaps = 1/315 (0%)
Query: 65 FTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQ 124
F+G+S D + + N ++ A + +++K P + F+ L+ + +
Sbjct: 24 FSGLSYDGYREKLSRNALL-HLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFD 82
Query: 125 TALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIII 184
+ F + + G + TY I+IN LC+ Q AL ++ ++ P + ++
Sbjct: 83 LVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLL 142
Query: 185 HSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIH 244
+ FC +S+A L +M+ PD T+ L++G ++ EA L++ MV K
Sbjct: 143 NGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ 202
Query: 245 PDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDI 304
PD T+ +++ L K G A +L M K ++ D++ Y++++D C V+ A ++
Sbjct: 203 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNL 262
Query: 305 FNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCK 364
F M +GI P+V +YS +I+ LC + +A LL++M + I P+ VT++SLID K
Sbjct: 263 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAK 322
Query: 365 SGRVSHAWELVDDVI 379
G++ A +L D++I
Sbjct: 323 EGKLIEAEKLFDEMI 337
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 274 bits (700), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 226/387 (58%), Gaps = 35/387 (9%)
Query: 28 LLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQ 87
+++ P P I EFNK+L+++ KMK + ISL ++ GIS +++T ILINC+C ++Q
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 88 ITSAFSVLAKILK-----------------------------------RGYRPDTITFTT 112
I+ A ++L K++K GYRPDTITFTT
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 113 LMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQL 172
L+ GL L+ + A+ D +V +G + + VTY +++NGLCK G A L+ +++
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 173 VKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEAT 232
++ DV ++ II S CK + V DA NL+ EM + + P+V TY++LI C + +A+
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 233 KLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGY 292
+LL +M+ K I+P+ TFN L+DA KEG EA+ + M+K+ + PDI TYNSL++G+
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 293 CLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDT 352
C+ ++KAK +F M + P++ +Y+ +I G CK+K+V++ L EM + ++ DT
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 353 VTYSSLIDGLCKSGRVSHAWELVDDVI 379
VTY++LI GL G +A ++ ++
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMV 387
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 192/355 (54%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
DAV++ ++++ M P I F ++ L A++L ++ G P++ T +++
Sbjct: 98 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 157
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
N C + I AF++L K+ D + F T++ LC V AL + +G R
Sbjct: 158 NGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 217
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
+ VTY LI+ LC G+ A QL+ + + + P++ + +I +F K+ +A L
Sbjct: 218 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 277
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+ +M+ R + PD+FTYN+LI GFC+ +L +A ++ + MV+K+ PD T+N L+ K
Sbjct: 278 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
V++ + M +G+ D +TY +L+ G + + A+ +F M G+ P++ +
Sbjct: 338 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 397
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
YSI+++GLC K+++AL + M I D Y+++I+G+CK+G+V W+L
Sbjct: 398 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 452
Score = 207 bits (528), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 189/357 (52%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A ++ N++ ++ FN I+ SL K +H A++L +++ GI P++ T + L
Sbjct: 167 DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 226
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+C C+ + + A +L+ ++++ P+ +TF L+ G+ A + HD ++ +
Sbjct: 227 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D TY LING C + A Q+ + + PD++ Y +I FCK K V D
Sbjct: 287 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L+ EM R ++ D TY LI G A K+ +MV+ + PD T++IL+D L
Sbjct: 347 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
G +++A V M K +K DI Y ++++G C +V+ D+F S+ +G+ PNV
Sbjct: 407 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 466
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
+Y+ MI+GLC + + EA LL +M +PD+ TY++LI + G + + EL+
Sbjct: 467 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELI 523
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 262 bits (669), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 121/360 (33%), Positives = 213/360 (59%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+DA+ +F+ +++ P P I++FN++L+++VK+K Y ISL +++ GI D++T I+
Sbjct: 67 NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 126
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
INC+C Q++ A S+L K+LK GY PD +T +L+ G C +V A+ D +V G+
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ D V Y +I+ LCK + A ++I+ + ++P+V YT +++ C SDA
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L S+M+ +++ P+V TY+AL+ F ++ EA +L +EMV +I PD T++ L++ L
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
+ EA + +M+ +G D+++YN+L++G+C V +F M QRG+ N
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+Y+ +I G + VD+A ++MD I PD TY+ L+ GLC +G + A + +D+
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Score = 191 bits (485), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 179/337 (53%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
DAVS+ ++++ + P I+ +N I+ SL K K A +++ GI P++ T T L+
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
N CN ++ + A +L+ ++K+ P+ IT++ L+ NG+V A + + +V
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID 292
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
D VTY LINGLC + A Q+ + + DV Y +I+ FCK K V D L
Sbjct: 293 PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 352
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+ EM R ++ + TYN LI GF + +A + +M I PD +T+NIL+ L
Sbjct: 353 FREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD 412
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
G +++A + M K+ + DI+TY +++ G C +V +A +F S+ +G+ P++ +
Sbjct: 413 NGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 472
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYS 356
Y+ M++GLC + E L +M + ++ + T S
Sbjct: 473 YTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 148/288 (51%)
Query: 87 QITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYR 146
++ A + + ++K P + F L+ + + + + G R D T+
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 147 ILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLAR 206
I+IN C Q AL ++ ++ +PD +++ FC+ VSDA +L +M+
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 207 RVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEA 266
PD+ YNA+I C ++ +A E+ K I P+ T+ LV+ L +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 267 KTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMING 326
+L+ M+K+ + P++ITY++L+D + +V +AK++F M + I P++ +YS +ING
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 327 LCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
LC ++DEA + M K + D V+Y++LI+G CK+ RV +L
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 352
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 112/191 (58%)
Query: 189 KDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAY 248
+D ++DA +L+S+M+ R P + +N L+ + + L +M I D Y
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 249 TFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM 308
TFNI+++ V A ++L M+K G +PD +T SL++G+C + V+ A + + M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 309 PQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRV 368
+ G P++ +Y+ +I+ LCKTK+V++A + E++ K I P+ VTY++L++GLC S R
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 369 SHAWELVDDVI 379
S A L+ D+I
Sbjct: 242 SDAARLLSDMI 252
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 61/164 (37%), Gaps = 35/164 (21%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
+ +D + +F + + + +N ++ + A Q+DF GISPDI+T
Sbjct: 344 KRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTY 403
Query: 76 TILINCYCNQAQITSAFSVLAKILKR---------------------------------- 101
IL+ C+ ++ A + + KR
Sbjct: 404 NILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSL 463
Query: 102 -GYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVT 144
G +PD +T+TT+M GLC G + + + +G + T
Sbjct: 464 KGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 63/119 (52%)
Query: 263 VKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSI 322
+ +A + + M+K P I+ +N L+ + + + + M GI ++++++I
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 323 MINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVIFI 381
+IN C +V AL++L +M PD VT SL++G C+ RVS A LVD ++ I
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 261 bits (668), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 226/379 (59%), Gaps = 35/379 (9%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
DDA+ +F + + P P IIEF+K+L+++ KM + IS +++ GIS +++T IL
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 79 INCYC-----------------------------------NQAQITSAFSVLAKILKRGY 103
INC+C + +I+ A +++ ++++ GY
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179
Query: 104 RPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQ 163
+PDT+TFTTL+ GL L+ + A+ D +V +G + D VTY ++NGLCK G T AL
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239
Query: 164 LMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFC 223
L+ +++ ++ +V +Y+ +I S CK + DA NL++EM + V P+V TY++LI C
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299
Query: 224 IVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDII 283
+ +A++LL +M+ + I+P+ TF+ L+DA K+G + +A+ + M+K+ + P+I
Sbjct: 300 NYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIF 359
Query: 284 TYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM 343
TY+SL++G+C++ + +AK + M ++ PNV +Y+ +ING CK K+VD+ + L EM
Sbjct: 360 TYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM 419
Query: 344 DCKNIIPDTVTYSSLIDGL 362
+ ++ +TVTY++LI G
Sbjct: 420 SQRGLVGNTVTYTTLIHGF 438
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 166/315 (52%)
Query: 18 ADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTI 77
A +AV++ +R+++ P ++ + ++ L K A++L ++++ I ++ +
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
+I+ C A ++ ++ +G RP+ IT+++L+ LC G+ A + ++ +
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
+ VT+ LI+ K G+ A +L ++ + + P++ Y+ +I+ FC + +A
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK 378
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
+ M+ + LP+V TYN LI GFC ++ + +L EM + + + T+ L+
Sbjct: 379 QMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF 438
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
+ + A+ V M+ GV P+I+TYN L+DG C ++ KA +F + + + P++
Sbjct: 439 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 498
Query: 318 HSYSIMINGLCKTKK 332
++Y+IMI G+CK K
Sbjct: 499 YTYNIMIEGMCKAGK 513
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 150/277 (54%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
+ D A+++ N++ ++ ++ ++ SL K +H A++L +++ G+ P++ T +
Sbjct: 233 DTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 292
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
LI+C CN + + A +L+ +++R P+ +TF+ L+ G++ A + ++ ++ +
Sbjct: 293 SLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR 352
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
+ TY LING C + + A Q++ + + P+V Y +I+ FCK K V
Sbjct: 353 SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKG 412
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
L+ EM R ++ + TY LI+GF A + +MV+ +HP+ T+NIL+D
Sbjct: 413 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 472
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYC 293
L K G + +A V + + ++PDI TYN +++G C
Sbjct: 473 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 509
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 162/327 (49%), Gaps = 2/327 (0%)
Query: 53 YPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTT 112
+P + S + F+G + + ++ + ++ A + + + P I F+
Sbjct: 26 FPLSFSFCRRRAFSGKTS--YDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSK 83
Query: 113 LMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQL 172
L+ + + + F + + G + TY ILIN C+ + AL L+ ++
Sbjct: 84 LLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLG 143
Query: 173 VKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEAT 232
+PD+ +++ FC +SDA L +M+ PD T+ LI+G + ++ EA
Sbjct: 144 YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV 203
Query: 233 KLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGY 292
L+D MV + PD T+ +V+ L K G+ A +L M ++ +++ Y++++D
Sbjct: 204 ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263
Query: 293 CLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDT 352
C + A ++F M +G+ PNV +YS +I+ LC + +A LL++M + I P+
Sbjct: 264 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL 323
Query: 353 VTYSSLIDGLCKSGRVSHAWELVDDVI 379
VT+S+LID K G++ A +L +++I
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMI 350
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 132/249 (53%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
R+ DDA+++F + P +I ++ +++ L + A L + I+P++ T
Sbjct: 267 RHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTF 326
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
+ LI+ + + ++ A + +++KR P+ T+++L+ G C+ ++ A Q + ++
Sbjct: 327 SALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIR 386
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
+ + VTY LING CK + ++L R++ + + + YT +IH F + + +
Sbjct: 387 KDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 446
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
A ++ +M++ V P++ TYN L+ G C +L +A + + + + PD YT+NI+++
Sbjct: 447 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 506
Query: 256 ALGKEGNVK 264
+ K G K
Sbjct: 507 GMCKAGKWK 515
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 257 bits (657), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 137/425 (32%), Positives = 233/425 (54%), Gaps = 55/425 (12%)
Query: 5 LRLKNSLPPSIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLD 64
L+LK S ++ DDA+ F+ ++R P ++ NK++ V+M AISL +++
Sbjct: 75 LKLK-SGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKME 133
Query: 65 FTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQ 124
I +I++ ILI C+C+ +++ + S K+ K G++PD +TF TL+ GLCL ++
Sbjct: 134 IRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRIS 193
Query: 125 TALQFHDHVVAQGF---------------------------------------------- 138
AL ++V GF
Sbjct: 194 EALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMV 253
Query: 139 ----RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
+D VTY ++NG+CKMG T++AL L+ +++ +KPDV +Y+ II CKD S
Sbjct: 254 GKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHS 313
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
DA L+SEML + + P+VFTYN +I GFC + +A +LL +M+ + I+PD TFN L+
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
A KEG + EA+ + M+ + + PD +TYNS++ G+C + + AK +F+ M +
Sbjct: 374 SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----S 429
Query: 315 PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
P+V +++ +I+ C+ K+VDE + LL E+ + ++ +T TY++LI G C+ ++ A +L
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 375 VDDVI 379
++I
Sbjct: 490 FQEMI 494
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 187/362 (51%), Gaps = 7/362 (1%)
Query: 20 DAVSIFNRLLRMSPT---PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
D S N L +M T P ++ ++ I+ L K H+ A L ++ GI+P++FT
Sbjct: 276 DTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYN 335
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
+I+ +C+ + + A +L +++R PD +TF L+ G++ A + D ++ +
Sbjct: 336 CMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
D VTY +I G CK + A + + + PDV + II +C+ K V +
Sbjct: 396 CIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEG 451
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
L E+ R ++ + TYN LI+GFC V L A L EM++ + PD T NIL+
Sbjct: 452 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 511
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
+ ++EA + V+ + D + YN ++ G C S+V++A D+F S+P G+ P+
Sbjct: 512 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
V +Y++MI+G C + +A L +M PD TY++LI G K+G + + EL+
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 631
Query: 377 DV 378
++
Sbjct: 632 EM 633
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 176/353 (49%), Gaps = 5/353 (1%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
DA +F+ +L P + +N ++ + A L + I+PD+ T LI
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ + ++ A + ++L R PDT+T+ +++ G C + + A D + +
Sbjct: 374 SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP--- 430
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
D VT+ +I+ C+ + +QL+R+I + + + Y +IH FC+ ++ A +L
Sbjct: 431 -DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+ EM++ V PD T N L+YGFC +L+EA +L + + I D +NI++ + K
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 549
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
V EA + + GV+PD+ TYN ++ G+C S ++ A +F+ M G P+ +
Sbjct: 550 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNST 609
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAW 372
Y+ +I G K ++D+++ L++EM D T + D L GR+ ++
Sbjct: 610 YNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGRLDKSF 661
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 107/272 (39%), Gaps = 74/272 (27%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
DDA +F+ + +P ++ FN I+ + K + L ++ G+ + T L
Sbjct: 418 DDAKHMFD----LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHD------- 131
I+ +C + +A + +++ G PDTIT L+ G C N +++ AL+ +
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533
Query: 132 -----------HVVAQGFRLDQV-----------------TYRILINGLCKMGQTRAALQ 163
H + +G ++D+ TY ++I+G C G++
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC--GKS----- 586
Query: 164 LMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFC 223
+SDA L+ +M PD TYN LI G
Sbjct: 587 ----------------------------AISDANVLFHKMKDNGHEPDNSTYNTLIRGCL 618
Query: 224 IVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
++ ++ +L+ EM + DA+T ++ D
Sbjct: 619 KAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 74/185 (40%), Gaps = 3/185 (1%)
Query: 14 SIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIF 73
+ N + A +F ++ P I N +L + + A+ L + + I D
Sbjct: 479 EVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTV 538
Query: 74 TLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHV 133
I+I+ C +++ A+ + + G PD T+ ++ G C + A +
Sbjct: 539 AYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKM 598
Query: 134 VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPD---VEMYTIIIHSFCKD 190
G D TY LI G K G+ +++L+ +++ D ++M +I D
Sbjct: 599 KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRLD 658
Query: 191 KLVSD 195
K SD
Sbjct: 659 KSFSD 663
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 137/425 (32%), Positives = 233/425 (54%), Gaps = 55/425 (12%)
Query: 5 LRLKNSLPPSIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLD 64
L+LK S ++ DDA+ F+ ++R P ++ NK++ V+M AISL +++
Sbjct: 75 LKLK-SGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKME 133
Query: 65 FTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQ 124
I +I++ ILI C+C+ +++ + S K+ K G++PD +TF TL+ GLCL ++
Sbjct: 134 IRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRIS 193
Query: 125 TALQFHDHVVAQGF---------------------------------------------- 138
AL ++V GF
Sbjct: 194 EALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMV 253
Query: 139 ----RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
+D VTY ++NG+CKMG T++AL L+ +++ +KPDV +Y+ II CKD S
Sbjct: 254 GKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHS 313
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
DA L+SEML + + P+VFTYN +I GFC + +A +LL +M+ + I+PD TFN L+
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
A KEG + EA+ + M+ + + PD +TYNS++ G+C + + AK +F+ M +
Sbjct: 374 SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----S 429
Query: 315 PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
P+V +++ +I+ C+ K+VDE + LL E+ + ++ +T TY++LI G C+ ++ A +L
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 375 VDDVI 379
++I
Sbjct: 490 FQEMI 494
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 187/362 (51%), Gaps = 7/362 (1%)
Query: 20 DAVSIFNRLLRMSPT---PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
D S N L +M T P ++ ++ I+ L K H+ A L ++ GI+P++FT
Sbjct: 276 DTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYN 335
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
+I+ +C+ + + A +L +++R PD +TF L+ G++ A + D ++ +
Sbjct: 336 CMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
D VTY +I G CK + A + + + PDV + II +C+ K V +
Sbjct: 396 CIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEG 451
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
L E+ R ++ + TYN LI+GFC V L A L EM++ + PD T NIL+
Sbjct: 452 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 511
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
+ ++EA + V+ + D + YN ++ G C S+V++A D+F S+P G+ P+
Sbjct: 512 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
V +Y++MI+G C + +A L +M PD TY++LI G K+G + + EL+
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 631
Query: 377 DV 378
++
Sbjct: 632 EM 633
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 172/345 (49%), Gaps = 4/345 (1%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
DA +F+ +L P + +N ++ + A L + I+PD+ T LI
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ + ++ A + ++L R PDT+T+ +++ G C + + A D + +
Sbjct: 374 SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP--- 430
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
D VT+ +I+ C+ + +QL+R+I + + + Y +IH FC+ ++ A +L
Sbjct: 431 -DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+ EM++ V PD T N L+YGFC +L+EA +L + + I D +NI++ + K
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 549
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
V EA + + GV+PD+ TYN ++ G+C S ++ A +F+ M G P+ +
Sbjct: 550 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNST 609
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCK 364
Y+ +I G K ++D+++ L++EM D T + +C+
Sbjct: 610 YNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICR 654
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 127/278 (45%), Gaps = 4/278 (1%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A + + +L P + +N ++ K + A H D SPD+ T +I
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA---KHMFDLMA-SPDVVTFNTII 439
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ YC ++ +L +I +RG +T T+ TL+ G C + A +++ G
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
D +T IL+ G C+ + AL+L IQ + D Y IIIH CK V +A++L
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 559
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+ + V PDV TYN +I GFC S + +A L +M PD T+N L+ K
Sbjct: 560 FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLK 619
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSE 297
G + ++ +++ M G D T + C VS+
Sbjct: 620 AGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSD 657
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 93/231 (40%), Gaps = 39/231 (16%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
DDA +F+ + +P ++ FN I+ + K + L ++ G+ + T L
Sbjct: 418 DDAKHMFD----LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHD------- 131
I+ +C + +A + +++ G PDTIT L+ G C N +++ AL+ +
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533
Query: 132 -----------HVVAQGFRLDQV-----------------TYRILINGLCKMGQTRAALQ 163
H + +G ++D+ TY ++I+G C A
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 593
Query: 164 LMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFT 214
L +++ +PD Y +I K + + L SEM + D FT
Sbjct: 594 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 65/164 (39%)
Query: 14 SIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIF 73
+ N + A +F ++ P I N +L + + A+ L + + I D
Sbjct: 479 EVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTV 538
Query: 74 TLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHV 133
I+I+ C +++ A+ + + G PD T+ ++ G C + A +
Sbjct: 539 AYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKM 598
Query: 134 VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDV 177
G D TY LI G K G+ +++L+ +++ D
Sbjct: 599 KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 642
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 129/391 (32%), Positives = 216/391 (55%), Gaps = 35/391 (8%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
DD++ +F +++ P P I +F+++L+++ KMK Y I L Q+ GI ++ T IL
Sbjct: 63 DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
+NC+C +Q++ A S L K++K G+ P +TF +L+ G C +V AL D +V G+
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY 182
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFC---------- 188
+ + V Y +I+GLCK Q AL L+ +++ + PDV Y +I C
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242
Query: 189 -------------------------KDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFC 223
K+ VS+A Y EM+ R + PD+ TY+ LIYG C
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 224 IVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDII 283
+ S+L EA ++ MV+K PD T++IL++ K V+ + M ++GV + +
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362
Query: 284 TYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM 343
TY L+ GYC ++N A++IF M G+ PN+ +Y+++++GLC K+++AL +LA+M
Sbjct: 363 TYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422
Query: 344 DCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
+ D VTY+ +I G+CK+G V+ AW++
Sbjct: 423 QKNGMDADIVTYNIIIRGMCKAGEVADAWDI 453
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 180/332 (54%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
DA+ +F++++ M P ++ +N I+ L K K A+ L ++++ GI PD+ T LI
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ C+ + + A +++ + KR PD TF L+ G+V A +F++ ++ +
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
D VTY +LI GLC + A ++ + + PDV Y+I+I+ +CK K V L
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+ EM R V+ + TY LI G+C +L A ++ MV +HP+ T+N+L+ L
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
G +++A +LA M K G+ DI+TYN ++ G C EV A DI+ S+ +G+ P++ +
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWT 468
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPD 351
Y+ M+ GL K EA L +M I+P+
Sbjct: 469 YTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 157/301 (52%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
+ D+A+ + NR+ + P ++ +N +++ L + A + + I PD+FT
Sbjct: 200 KQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTF 259
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
LI+ + +++ A ++++R PD +T++ L+ GLC+ ++ A + +V+
Sbjct: 260 NALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVS 319
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
+G D VTY ILING CK + ++L ++ + V + YTI+I +C+ ++
Sbjct: 320 KGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNV 379
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
A ++ M+ V P++ TYN L++G C ++++A +L +M + D T+NI++
Sbjct: 380 AEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIR 439
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
+ K G V +A + + QG+ PDI TY ++M G +A +F M + GI P
Sbjct: 440 GMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499
Query: 316 N 316
N
Sbjct: 500 N 500
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 103/183 (56%)
Query: 193 VSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNI 252
+ D+ +L+ M+ R LP + ++ L+ + + L ++M I + T NI
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 253 LVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG 312
L++ + + A + L M+K G +P I+T+ SL++G+C V A +F+ M G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 313 IAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAW 372
PNV Y+ +I+GLCK+K+VD AL+LL M+ I PD VTY+SLI GLC SGR S A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 373 ELV 375
+V
Sbjct: 242 RMV 244
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 110/205 (53%)
Query: 175 PDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKL 234
P + ++ ++ + K K L+ +M + ++ T N L+ FC SQL A
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 235 LDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCL 294
L +M+ P TF L++ + V +A + M+ G KP+++ YN+++DG C
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 295 VSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVT 354
+V+ A D+ N M + GI P+V +Y+ +I+GLC + + +A +++ M + I PD T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 355 YSSLIDGLCKSGRVSHAWELVDDVI 379
+++LID K GRVS A E +++I
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMI 283
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 254 bits (649), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 131/406 (32%), Positives = 216/406 (53%), Gaps = 32/406 (7%)
Query: 1 MSSFLRLKNSLPPSIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLS 60
+S F S S N ++ + +F ++++ P P I++F+K+L+ + K K+Y ISL
Sbjct: 33 ISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLF 92
Query: 61 HQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLN 120
H ++ GI D+++ I+INC C ++ A SV+ K++K GY PD +T ++L+ G C
Sbjct: 93 HHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQG 152
Query: 121 GQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMY 180
+V A+ + GFR D V Y +I+G CK+G A++L +++ V+ D Y
Sbjct: 153 NRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTY 212
Query: 181 TIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVT 240
++ C SDA L +M+ R ++P+V T+ A+I F + EA KL +EM
Sbjct: 213 NSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTR 272
Query: 241 KNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNK 300
+ + PD +T+N L++ L G V EAK +L +M+ +G PD++TYN+L++G+C V++
Sbjct: 273 RCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDE 332
Query: 301 AKDIFNSMPQRGIA--------------------------------PNVHSYSIMINGLC 328
+F M QRG+ PN+ +YSI++ GLC
Sbjct: 333 GTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLC 392
Query: 329 KTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
+V++AL L M I D TY+ +I G+CK G V AW+L
Sbjct: 393 MNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDL 438
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 157/297 (52%), Gaps = 3/297 (1%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+DAV +F+R+ R + +N ++ L + A L + I P++ T T +
Sbjct: 191 NDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAV 250
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ + + + + A + ++ +R PD T+ +L+ GLC++G+V A Q D +V +G
Sbjct: 251 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 310
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D VTY LING CK + +L R++ + + D Y II + + A
Sbjct: 311 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQE 370
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
++S M +R P++ TY+ L+YG C+ ++++A L + M I D T+NI++ +
Sbjct: 371 IFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMC 427
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
K GNV++A + + +G+KPD+++Y +++ G+C + +K+ ++ M + G+ P
Sbjct: 428 KIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 102/187 (54%)
Query: 193 VSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNI 252
+ + +L+ +M+ R LP + ++ ++ L M I D Y++NI
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 253 LVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG 312
+++ L + A +V+ MMK G +PD++T +SL++G+C + V A D+ + M + G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 313 IAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAW 372
P+V Y+ +I+G CK V++A+ L M+ + D VTY+SL+ GLC SGR S A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 373 ELVDDVI 379
L+ D++
Sbjct: 230 RLMRDMV 236
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 250 bits (638), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 121/360 (33%), Positives = 206/360 (57%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++A+ +F ++ P P II+F K+L + KMK + I+L L G+S D++T +L
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
+NC+C +Q A S L K++K G+ PD +TFT+L+ G CL +++ A+ + +V G
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ D V Y +I+ LCK G AL L Q++ ++PDV MYT +++ C DA +
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L M R++ PDV T+NALI F + +A +L +EM+ +I P+ +T+ L++
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
EG V EA+ + +M +G PD++ Y SL++G+C +V+ A IF M Q+G+ N
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+Y+ +I G + K + A + + M + + P+ TY+ L+ LC +G+V A + +D+
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 175/363 (48%), Gaps = 38/363 (10%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++A+S+ N+++ M P ++ + I+ SL K H A+SL Q++ GI PD+ T L
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
+N CN + A S+L + KR +PD ITF L+ G+ A + ++ ++
Sbjct: 219 VNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI 278
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ TY LING C G A Q+ ++ + PDV YT +I+ FCK K V DA
Sbjct: 279 APNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMK 338
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
++ EM + + + TY LI GF V + A ++ MV++ + P+ T+N+L+ L
Sbjct: 339 IFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLC 398
Query: 259 KEGNVKEAKTVLAVMMKQ---GVKPDIITYNSLMDGYCL--------------------- 294
G VK+A + M K+ GV P+I TYN L+ G C
Sbjct: 399 YNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDI 458
Query: 295 --------------VSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLL 340
+V A ++F S+P +G+ PNV +Y+ MI+GL + EA L
Sbjct: 459 GIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLF 518
Query: 341 AEM 343
+M
Sbjct: 519 RKM 521
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 155/298 (52%), Gaps = 3/298 (1%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
DA S+ + + P +I FN ++ + VK + A L +++ I+P+IFT T LI
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
N +C + + A + + +G PD + +T+L+ G C +V A++ + +G
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
+ +TY LI G ++G+ A ++ + + V P++ Y +++H C + V A +
Sbjct: 350 GNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMI 409
Query: 200 YSEMLARR---VLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
+ +M R V P+++TYN L++G C +L++A + ++M + + T+ I++
Sbjct: 410 FEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQG 469
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
+ K G VK A + + +GVKP+++TY +++ G ++A +F M + G++
Sbjct: 470 MCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 211/373 (56%), Gaps = 1/373 (0%)
Query: 6 RLKNSLPPSIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDF 65
+L+ SIR +DA ++F ++ P P I++F ++LT+ ++ Y T I S +++
Sbjct: 41 KLRTGFLHSIR-FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMEL 99
Query: 66 TGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQT 125
GIS D+++ TILI+C+C ++++ A SVL K++K GY P +TF +L+ G CL ++
Sbjct: 100 YGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGD 159
Query: 126 ALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIH 185
A +V G+ + V Y LI+GLCK G+ AL+L+ +++ + + DV Y ++
Sbjct: 160 AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT 219
Query: 186 SFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHP 245
C SDA + +M+ R + PDV T+ ALI F L EA +L EM+ ++ P
Sbjct: 220 GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDP 279
Query: 246 DAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIF 305
+ T+N +++ L G + +AK +M +G P+++TYN+L+ G+C V++ +F
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Query: 306 NSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKS 365
M G ++ +Y+ +I+G C+ K+ AL++ M + + PD +T+ L+ GLC +
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN 399
Query: 366 GRVSHAWELVDDV 378
G + A DD+
Sbjct: 400 GEIESALVKFDDM 412
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 162/330 (49%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
DA S+ +++ P ++ +N ++ L K A+ L ++++ G+ D+ T L+
Sbjct: 159 DAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLL 218
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
C + + A +L ++KR PD +TFT L+ G + A + + ++
Sbjct: 219 TGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD 278
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
+ VTY +INGLC G+ A + + + P+V Y +I FCK ++V + L
Sbjct: 279 PNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKL 338
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+ M D+FTYN LI+G+C V +L+ A + MV++ + PD T IL+ L
Sbjct: 339 FQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCV 398
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
G ++ A M + I+ YN ++ G C +V KA ++F +P G+ P+ +
Sbjct: 399 NGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDART 458
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNII 349
Y+IMI GLCK EA L+ M + II
Sbjct: 459 YTIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 104/186 (55%)
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
DA+ L+ EM+ + LP + + L+ + + + +M I D Y+F IL
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
+ + + A +VL MMK G +P I+T+ SL+ G+CLV+ + A + M + G
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 314 APNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWE 373
PNV Y+ +I+GLCK +++ AL LL EM+ K + D VTY++L+ GLC SGR S A
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 374 LVDDVI 379
++ D++
Sbjct: 233 MLRDMM 238
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 111/207 (53%), Gaps = 35/207 (16%)
Query: 173 VKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEAT 232
+ D+ +TI+IH FC+ +S A ++ +M+ P + T+ +L++GFC+V+++
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRI---- 157
Query: 233 KLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGY 292
DA++ IL M+K G +P+++ YN+L+DG
Sbjct: 158 ------------GDAFSLVIL-------------------MVKSGYEPNVVVYNTLIDGL 186
Query: 293 CLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDT 352
C E+N A ++ N M ++G+ +V +Y+ ++ GLC + + +A +L +M ++I PD
Sbjct: 187 CKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDV 246
Query: 353 VTYSSLIDGLCKSGRVSHAWELVDDVI 379
VT+++LID K G + A EL ++I
Sbjct: 247 VTFTALIDVFVKQGNLDEAQELYKEMI 273
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/351 (34%), Positives = 197/351 (56%)
Query: 24 IFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYC 83
+ +++++ P + +N + L + A+ + L G PD+ T LI C
Sbjct: 238 LLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLC 297
Query: 84 NQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQV 143
++ A L K++ G PD+ T+ TL+ G C G VQ A + V GF DQ
Sbjct: 298 KNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQF 357
Query: 144 TYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEM 203
TYR LI+GLC G+T AL L + G+ +KP+V +Y +I ++ +A L +EM
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM 417
Query: 204 LARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNV 263
+ ++P+V T+N L+ G C + + +A L+ M++K PD +TFNIL+ + +
Sbjct: 418 SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKM 477
Query: 264 KEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIM 323
+ A +L VM+ GV PD+ TYNSL++G C S+ + + +M ++G APN+ +++I+
Sbjct: 478 ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNIL 537
Query: 324 INGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
+ LC+ +K+DEAL LL EM K++ PD VT+ +LIDG CK+G + A+ L
Sbjct: 538 LESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTL 588
Score = 197 bits (502), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 198/388 (51%), Gaps = 9/388 (2%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+AV++F R+ P + +N I++ LV ++ A + ++ GI+PD+++ TI +
Sbjct: 94 EAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRM 153
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+C ++ +A +L + +G + + + T++ G + ++A G
Sbjct: 154 KSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVS 213
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
L T+ L+ LCK G + +L+ ++ + V P++ Y + I C+ + A +
Sbjct: 214 LCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRM 273
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
++ + PDV TYN LIYG C S+ +EA L +MV + + PD+YT+N L+ K
Sbjct: 274 VGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCK 333
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
G V+ A+ ++ + G PD TY SL+DG C E N+A +FN +GI PNV
Sbjct: 334 GGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVIL 393
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV- 378
Y+ +I GL + EA L EM K +IP+ T++ L++GLCK G VS A LV +
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453
Query: 379 -------IFIFNVWM-SYAKAIKLTRQL 398
IF FN+ + Y+ +K+ L
Sbjct: 454 SKGYFPDIFTFNILIHGYSTQLKMENAL 481
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 188/393 (47%), Gaps = 36/393 (9%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D AV + L+ P P +I +N ++ L K + A ++ G+ PD +T L
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTL 327
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I YC + A ++ + G+ PD T+ +L+ GLC G+ AL + + +G
Sbjct: 328 IAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI 387
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ + + Y LI GL G A QL ++ + + P+V+ + I+++ CK VSDA
Sbjct: 388 KPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L M+++ PD+FT+N LI+G+ +++ A ++LD M+ + PD YT+N L++ L
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLC 507
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
K ++ M+++G P++ T+N L++ C ++++A + M + + P+
Sbjct: 508 KTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAV 567
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMD----------CKNII------------------- 349
++ +I+G CK +D A L +M+ NII
Sbjct: 568 TFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQE 627
Query: 350 -------PDTVTYSSLIDGLCKSGRVSHAWELV 375
PD TY ++DG CK+G V+ ++ +
Sbjct: 628 MVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFL 660
Score = 171 bits (433), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 193/391 (49%), Gaps = 10/391 (2%)
Query: 5 LRLKNSLPPSIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLD 64
+R+K+ S +A A+ + N + ++ + ++ + L ++
Sbjct: 151 IRMKSFCKTSRPHA--ALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKML 208
Query: 65 FTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQ 124
+G+S + T L+ C + + +L K++KRG P+ T+ ++GLC G++
Sbjct: 209 ASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELD 268
Query: 125 TALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIII 184
A++ ++ QG + D +TY LI GLCK + + A + ++ + ++PD Y +I
Sbjct: 269 GAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLI 328
Query: 185 HSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIH 244
+CK +V A + + + +PD FTY +LI G C + A L +E + K I
Sbjct: 329 AGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388
Query: 245 PDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDI 304
P+ +N L+ L +G + EA + M ++G+ P++ T+N L++G C + V+ A +
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448
Query: 305 FNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCK 364
M +G P++ +++I+I+G K++ AL +L M + PD TY+SL++GLCK
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCK 508
Query: 365 SGRVSHAWELVDDVI--------FIFNVWMS 387
+ + E ++ F FN+ +
Sbjct: 509 TSKFEDVMETYKTMVEKGCAPNLFTFNILLE 539
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 176/375 (46%), Gaps = 26/375 (6%)
Query: 7 LKNSLPPSIRNAD---DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQL 63
L N+L + N +A + N + P + FN ++ L KM A L +
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Query: 64 DFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQV 123
G PDIFT ILI+ Y Q ++ +A +L +L G PD T+ +L+ GLC +
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKF 512
Query: 124 QTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTII 183
+ ++ + +V +G + T+ IL+ LC+ + AL L+ +++ + V PD + +
Sbjct: 513 EDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTL 572
Query: 184 IHSFCKDKLVSDAYNLYSEML-ARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKN 242
I FCK+ + AY L+ +M A +V TYN +I+ F + A KL EMV +
Sbjct: 573 IDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRC 632
Query: 243 IHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAK 302
+ PD YT+ ++VD K GNV L MM+ G P + T +++ C+ V +A
Sbjct: 633 LGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAA 692
Query: 303 DIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGL 362
I + M Q+G+ P EA+N + ++D K + + L+
Sbjct: 693 GIIHRMVQKGLVP-------------------EAVNTICDVDKKEVAAPKLVLEDLLK-- 731
Query: 363 CKSGRVSHAWELVDD 377
KS +A+EL+ D
Sbjct: 732 -KSCITYYAYELLFD 745
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 123/271 (45%), Gaps = 36/271 (13%)
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVE-MYTIIIHSFCKDKLVSD 195
GF+ TYR +I L G+ A +++ ++ + +E +Y + ++ + V +
Sbjct: 35 GFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQE 94
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
A N++ M P VF+YNA++ +A K+ M + I PD Y+F I +
Sbjct: 95 AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGY----------------------- 292
+ K A +L M QG + +++ Y +++ G+
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214
Query: 293 ------------CLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLL 340
C +V + + + + + +RG+ PN+ +Y++ I GLC+ ++D A+ ++
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMV 274
Query: 341 AEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
+ + PD +TY++LI GLCK+ + A
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 122/391 (31%), Positives = 211/391 (53%), Gaps = 35/391 (8%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+DA+++F + P P I++F+++L ++ K+ Y ISL L+ GIS D+++ T L
Sbjct: 61 NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+C+C A+++ A S L K++K G+ P +TF +L+ G C + A+ D +V G+
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMY----TIIIHS-------- 186
+ V Y +I+ LC+ GQ AL +++ ++ ++PDV Y T + HS
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 187 -----------------------FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFC 223
+ K+ + +A Y+EM+ R V P++ TYN+LI G C
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 224 IVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDII 283
I L EA K+L+ +V+K P+A T+N L++ K V + +L VM + GV D
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTF 360
Query: 284 TYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM 343
TYN+L GYC + + A+ + M G+ P++++++I+++GLC K+ +AL L ++
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDL 420
Query: 344 DCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
+ +TY+ +I GLCK+ +V AW L
Sbjct: 421 QKSKTVVGIITYNIIIKGLCKADKVEDAWYL 451
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 165/324 (50%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A+S+ ++++ + P ++ +N I+ SL + TA+ + + GI PD+ T LI
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ + +L+ +++ G PD ITF+ L+ GQ+ A + ++ ++ +
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
+ VTY LINGLC G A +++ + + P+ Y +I+ +CK K V D +
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKI 346
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
M V D FTYN L G+C + A K+L MV+ +HPD YTFNIL+D L
Sbjct: 347 LCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCD 406
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
G + +A L + K IITYN ++ G C +V A +F S+ +G++P+V +
Sbjct: 407 HGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVIT 466
Query: 320 YSIMINGLCKTKKVDEALNLLAEM 343
Y M+ GL + + EA L +M
Sbjct: 467 YITMMIGLRRKRLWREAHELYRKM 490
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 149/300 (49%), Gaps = 9/300 (3%)
Query: 105 PDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQL 164
P + F+ L+ + + + + H+ G D ++ LI+ C+ + AL
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 165 MRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCI 224
+ ++ +P + + +++ FC +A +L +++ P+V YN +I C
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 225 VSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIIT 284
Q+ A +L M I PD T+N L+ L G + +L+ MM+ G+ PD+IT
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256
Query: 285 YNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMD 344
+++L+D Y ++ +AK +N M QR + PN+ +Y+ +INGLC +DEA +L +
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV 316
Query: 345 CKNIIPDTVTYSSLIDGLCKSGRVSHAWEL--------VDDVIFIFN-VWMSYAKAIKLT 395
K P+ VTY++LI+G CK+ RV ++ VD F +N ++ Y +A K +
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFS 376
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 134/298 (44%), Gaps = 36/298 (12%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+ A+ + + +M P ++ +N ++T L + + + + GISPD+ T + L
Sbjct: 201 NTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSAL 260
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ Y + Q+ A ++++R P+ +T+ +L+ GLC++G + A + + +V++GF
Sbjct: 261 IDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGF 320
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ VTY LING CK + ++++ + V D Y + +C+ S A
Sbjct: 321 FPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEK 380
Query: 199 LYSEMLARRVLPDVFT-----------------------------------YNALIYGFC 223
+ M++ V PD++T YN +I G C
Sbjct: 381 VLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLC 440
Query: 224 IVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQ-GVKP 280
++++A L + K + PD T+ ++ L ++ +EA + M K+ G+ P
Sbjct: 441 KADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
+ DD + I + R +N + + + A + ++ G+ PD++T
Sbjct: 338 KRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTF 397
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
IL++ C+ +I A L + K IT+ ++KGLC +V+ A +
Sbjct: 398 NILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLAL 457
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQ 171
+G D +TY ++ GL + R A +L R++Q +
Sbjct: 458 KGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKE 493
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 238 bits (607), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 121/374 (32%), Positives = 203/374 (54%), Gaps = 6/374 (1%)
Query: 4 FLRLKNSLPPSIRNA------DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAI 57
++R +S +RN +DA+ +F R++ P P II+F ++L+ + KM Y I
Sbjct: 44 WIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVI 103
Query: 58 SLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGL 117
SL Q+ GI P + T I+++C C +Q A L K++K G+ PD +TFT+L+ G
Sbjct: 104 SLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGY 163
Query: 118 CLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDV 177
C +++ A+ D ++ GF+ + VTY LI LCK A++L Q+ +P+V
Sbjct: 164 CHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNV 223
Query: 178 EMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDE 237
Y ++ C+ DA L +M+ RR+ P+V T+ ALI F V +L EA +L +
Sbjct: 224 VTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNV 283
Query: 238 MVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSE 297
M+ +++PD +T+ L++ L G + EA+ + +M + G P+ + Y +L+ G+C
Sbjct: 284 MIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKR 343
Query: 298 VNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSS 357
V IF M Q+G+ N +Y+++I G C + D A + +M + PD TY+
Sbjct: 344 VEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNV 403
Query: 358 LIDGLCKSGRVSHA 371
L+DGLC +G+V A
Sbjct: 404 LLDGLCCNGKVEKA 417
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 180/337 (53%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+DA+++F+++L M P ++ + ++ L K +H A+ L +Q+ G P++ T L
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
+ C + A +L ++KR P+ ITFT L+ G++ A + ++ ++
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D TY LINGLC G A Q+ ++ P+ +YT +IH FCK K V D
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMK 349
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
++ EM + V+ + TY LI G+C+V + A ++ ++M ++ PD T+N+L+D L
Sbjct: 350 IFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLC 409
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
G V++A + M K+ + +I+TY ++ G C + +V A D+F S+ +G+ PNV
Sbjct: 410 CNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVI 469
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTY 355
+Y+ MI+G C+ + EA +L +M +P+ Y
Sbjct: 470 TYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 99/186 (53%)
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
+DA +L++ M+ R LP + + L+ +++ L ++M I P T NI+
Sbjct: 65 NDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIV 124
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
+ + A L MMK G +PD++T+ SL++GYC + + A +F+ + G
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184
Query: 314 APNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWE 373
PNV +Y+ +I LCK + ++ A+ L +M P+ VTY++L+ GLC+ GR A
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244
Query: 374 LVDDVI 379
L+ D++
Sbjct: 245 LLRDMM 250
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 121/237 (51%), Gaps = 2/237 (0%)
Query: 144 TYR-ILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSE 202
+YR IL NGL + Q AL L ++ P + +T ++ K +L+ +
Sbjct: 50 SYRKILRNGLHNL-QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQ 108
Query: 203 MLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGN 262
M + P + T N +++ C+ SQ A+ L +M+ PD TF L++
Sbjct: 109 MQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNR 168
Query: 263 VKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSI 322
+++A + ++ G KP+++TY +L+ C +N A ++FN M G PNV +Y+
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228
Query: 323 MINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
++ GLC+ + +A LL +M + I P+ +T+++LID K G++ A EL + +I
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI 285
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 57/128 (44%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A +FN++ P I +N +L L A+ + + + +I T TI+
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTII 439
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I C ++ AF + + +G +P+ IT+TT++ G C G + A + GF
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGF 499
Query: 139 RLDQVTYR 146
++ Y+
Sbjct: 500 LPNESVYK 507
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 114/282 (40%), Positives = 178/282 (63%), Gaps = 4/282 (1%)
Query: 98 ILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQ 157
+++ G RPD +TFTTLM GLC G+V AL D +V +G + Y +INGLCKMG
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ----PYGTIINGLCKMGD 56
Query: 158 TRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNA 217
T +AL L+ +++ +K V +Y II CKD A NL++EM + + PDV TY+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 218 LIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQG 277
+I FC + +A +LL +M+ + I+PD TF+ L++AL KEG V EA+ + M+++G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 278 VKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEAL 337
+ P ITYNS++DG+C +N AK + +SM + +P+V ++S +ING CK K+VD +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 338 NLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+ EM + I+ +TVTY++LI G C+ G + A +L++ +I
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMI 278
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 135/259 (52%), Gaps = 3/259 (1%)
Query: 20 DAVSIFNRLLRMSPT---PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
D S N L +M T ++ +N I+ L K H+ A +L ++ GI PD+ T +
Sbjct: 56 DTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYS 115
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
+I+ +C + T A +L +++R PD +TF+ L+ L G+V A + + ++ +
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G +TY +I+G CK + A +++ + + PDV ++ +I+ +CK K V +
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
++ EM R ++ + TY LI+GFC V L A LL+ M++ + P+ TF ++ +
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLAS 295
Query: 257 LGKEGNVKEAKTVLAVMMK 275
L + +++A +L + K
Sbjct: 296 LCSKKELRKAFAILEDLQK 314
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 139/290 (47%), Gaps = 4/290 (1%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A+++ +R++ P + I+ L KM +A++L +++ T I + +I+
Sbjct: 29 ALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIID 84
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
C A ++ ++ +G PD IT++ ++ C +G+ A Q ++ +
Sbjct: 85 RLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINP 144
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
D VT+ LIN L K G+ A ++ + + + P Y +I FCK ++DA +
Sbjct: 145 DVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRML 204
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
M ++ PDV T++ LI G+C ++ ++ EM + I + T+ L+ +
Sbjct: 205 DSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQV 264
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQ 310
G++ A+ +L VM+ GV P+ IT+ S++ C E+ KA I + +
Sbjct: 265 GDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 112/224 (50%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A ++F + P +I ++ ++ S + + A L + I+PD+ T + LIN
Sbjct: 95 AQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALIN 154
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
+ +++ A + +L+RG P TIT+ +++ G C ++ A + D + ++
Sbjct: 155 ALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSP 214
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
D VT+ LING CK + +++ ++ + + + YT +IH FC+ + A +L
Sbjct: 215 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 274
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIH 244
+ M++ V P+ T+ +++ C +L++A +L+++ H
Sbjct: 275 NVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEGH 318
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 119/389 (30%), Positives = 206/389 (52%), Gaps = 36/389 (9%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
DDA+ +F +++ P P I+EF+K+L+++ KM + ISL Q+ GIS +++T +I
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
IN +C ++Q++ A ++L K++K GY P +T +L+ G C ++ A+ D +V G+
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ D VT+ L++GL + + A+ L+ ++ + +PD+ Y +I+ CK A N
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYT--------- 249
L ++M ++ DV YN +I G C + +A L ++M TK I PD +T
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 250 --------------------------FNILVDALGKEGNVKEAKTVLAVMMK-QGVKPDI 282
FN L+DA KEG + EA+ + M+K + PD+
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDV 356
Query: 283 ITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAE 342
+ YN+L+ G+C V + ++F M QRG+ N +Y+ +I+G + + D A + +
Sbjct: 357 VAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 416
Query: 343 MDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
M + PD +TY+ L+DGLC +G V A
Sbjct: 417 MVSDGVHPDIMTYNILLDGLCNNGNVETA 445
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 194/395 (49%), Gaps = 36/395 (9%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+AV++ ++++ M P + F ++ L + A++L ++ G PD+ T +I
Sbjct: 163 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 222
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
N C + + A ++L K+ K D + + T++ GLC + A + + +G +
Sbjct: 223 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK 282
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
D TY LI+ LC G+ A +L+ + + + PD+ + +I +F K+ + +A L
Sbjct: 283 PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKL 342
Query: 200 YSEML-ARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEM-------------------- 238
Y EM+ ++ PDV YN LI GFC +++E ++ EM
Sbjct: 343 YDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFF 402
Query: 239 ---------------VTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDII 283
V+ +HPD T+NIL+D L GNV+ A V M K+ +K DI+
Sbjct: 403 QARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIV 462
Query: 284 TYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM 343
TY ++++ C +V D+F S+ +G+ PNV +Y+ M++G C+ +EA L EM
Sbjct: 463 TYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM 522
Query: 344 DCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+P++ TY++LI + G + + EL+ ++
Sbjct: 523 KEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 179/355 (50%), Gaps = 2/355 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A+++ N++ + ++ +N I+ L K KH A L ++++ GI PD+FT L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+C CN + + A +L+ +L++ PD + F L+ G++ A + +D +V
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351
Query: 139 RL-DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
D V Y LI G CK + +++ R++ + + + YT +IH F + + +A
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 411
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
++ +M++ V PD+ TYN L+ G C ++ A + + M +++ D T+ +++AL
Sbjct: 412 MVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEAL 471
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
K G V++ + + +GVKP+++TY ++M G+C +A +F M + G PN
Sbjct: 472 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNS 531
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAW 372
+Y+ +I + + L+ EM D T+ L+ + GR+ ++
Sbjct: 532 GTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF-GLVTNMLHDGRLDKSF 585
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 148/293 (50%)
Query: 87 QITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYR 146
++ A + ++K P + F+ L+ + + + + + G + TY
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 147 ILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLAR 206
I IN C+ Q AL ++ ++ P + +++ FC +S+A L +M+
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 207 RVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEA 266
PD T+ L++G ++ EA L++ MV K PD T+ +++ L K G A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 267 KTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMING 326
+L M K ++ D++ YN+++DG C ++ A D+FN M +GI P+V +Y+ +I+
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 327 LCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
LC + +A LL++M KNI PD V +++LID K G++ A +L D+++
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 143/313 (45%), Gaps = 1/313 (0%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
++ DDA +FN++ P + +N +++ L + A L + I+PD+
Sbjct: 264 KHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFF 323
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGY-RPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
LI+ + + ++ A + +++K + PD + + TL+KG C +V+ ++ +
Sbjct: 324 NALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMS 383
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
+G + VTY LI+G + A + +Q+ V PD+ Y I++ C + V
Sbjct: 384 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVE 443
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
A ++ M R + D+ TY +I C ++++ L + K + P+ T+ ++
Sbjct: 444 TALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 503
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
++G +EA + M + G P+ TYN+L+ + + ++ M G A
Sbjct: 504 SGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFA 563
Query: 315 PNVHSYSIMINGL 327
+ ++ ++ N L
Sbjct: 564 GDASTFGLVTNML 576
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 101/188 (53%)
Query: 189 KDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAY 248
+D + DA L+ +M+ R P + ++ L+ +++ L ++M I + Y
Sbjct: 52 QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111
Query: 249 TFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM 308
T++I ++ + + A +L MMK G P I+T NSL++G+C + +++A + + M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 309 PQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRV 368
+ G P+ +++ +++GL + K EA+ L+ M K PD VTY ++I+GLCK G
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 369 SHAWELVD 376
A L++
Sbjct: 232 DLALNLLN 239
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/374 (32%), Positives = 211/374 (56%), Gaps = 4/374 (1%)
Query: 6 RLKNSLPPSIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDF 65
RL+N L DDA S+F +L+ P P I++F ++LT + KM + I L H+++
Sbjct: 50 RLRNEL--HCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMEN 107
Query: 66 TGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQT 125
GIS D+++ TILI+C+C ++++ A ++L K++K G+RP +T +L+ G C + Q
Sbjct: 108 LGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQE 167
Query: 126 ALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIH 185
A+ D + GF + V Y +INGLCK AL++ ++ + ++ D Y +I
Sbjct: 168 AVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLIS 227
Query: 186 SFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHP 245
+DA L +M+ R++ P+V + ALI F L EA L EM+ +++ P
Sbjct: 228 GLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVP 287
Query: 246 DAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIF 305
+ +T+N L++ G + +AK + +M+ +G PD++TYN+L+ G+C V +F
Sbjct: 288 NVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF 347
Query: 306 NSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM-DCKNIIPDTVTYSSLIDGLCK 364
M +G+ + +Y+ +I+G C+ K++ A + M DC + PD VTY+ L+D LC
Sbjct: 348 CEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC-GVSPDIVTYNILLDCLCN 406
Query: 365 SGRVSHAWELVDDV 378
+G++ A +V+D+
Sbjct: 407 NGKIEKALVMVEDL 420
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 166/336 (49%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+AVS+ + + P ++ +N ++ L K + A+ + + ++ GI D T LI
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 226
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ N + T A +L ++KR P+ I FT L+ G + A + ++ +
Sbjct: 227 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV 286
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
+ TY LING C G A + + + PDV Y +I FCK K V D L
Sbjct: 287 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 346
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+ EM + ++ D FTYN LI+G+C +L A K+ + MV + PD T+NIL+D L
Sbjct: 347 FCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 406
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
G +++A ++ + K + DIITYN ++ G C ++ +A +F S+ ++G+ P+ +
Sbjct: 407 NGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIA 466
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTY 355
Y MI+GLC+ EA L M +P Y
Sbjct: 467 YITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 144/294 (48%)
Query: 87 QITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYR 146
+ AFS+ ++L+ P + FT ++ + + + + + G D ++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 147 ILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLAR 206
ILI+ C+ + AL L+ ++ +P + +++ FC+ +A +L M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 207 RVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEA 266
+P+V YN +I G C L A ++ M K I DA T+N L+ L G +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 267 KTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMING 326
+L M+K+ + P++I + +L+D + + +A++++ M +R + PNV +Y+ +ING
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 327 LCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVIF 380
C + +A + M K PD VTY++LI G CKS RV +L ++ +
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY 352
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 221 bits (562), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 196/359 (54%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N D A+++F+++ P ++ +N ++ K++ L + G+ P++ +
Sbjct: 220 NIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYN 279
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
++IN C + ++ VL ++ +RGY D +T+ TL+KG C G AL H ++
Sbjct: 280 VVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH 339
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G +TY LI+ +CK G A++ + Q++ + + P+ YT ++ F + +++A
Sbjct: 340 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
Y + EM P V TYNALI G C+ ++++A +L++M K + PD +++ ++
Sbjct: 400 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
+ +V EA V M+++G+KPD ITY+SL+ G+C +A D++ M + G+ P+
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
+Y+ +IN C +++AL L EM K ++PD VTYS LI+GL K R A L+
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Score = 214 bits (546), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 200/364 (54%), Gaps = 1/364 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPT-AISLSHQLDFTGISPDIFTLTI 77
D A+SI + P ++ +N +L + ++ K + A ++ ++ + +SP++FT I
Sbjct: 151 DKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNI 210
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
LI +C I A ++ K+ +G P+ +T+ TL+ G C ++ + + +G
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG 270
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
+ ++Y ++INGLC+ G+ + ++ ++ + D Y +I +CK+ A
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
+++EML + P V TY +LI+ C + A + LD+M + + P+ T+ LVD
Sbjct: 331 VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGF 390
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
++G + EA VL M G P ++TYN+L++G+C+ ++ A + M ++G++P+V
Sbjct: 391 SQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDV 450
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDD 377
SYS +++G C++ VDEAL + EM K I PDT+TYSSLI G C+ R A +L ++
Sbjct: 451 VSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEE 510
Query: 378 VIFI 381
++ +
Sbjct: 511 MLRV 514
Score = 197 bits (502), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 194/368 (52%), Gaps = 15/368 (4%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N A+ + +LR TP +I + ++ S+ K + A+ Q+ G+ P+ T T
Sbjct: 325 NFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYT 384
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
L++ + + + A+ VL ++ G+ P +T+ L+ G C+ G+++ A+ + + +
Sbjct: 385 TLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEK 444
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G D V+Y +++G C+ AL++ R++ + +KPD Y+ +I FC+ + +A
Sbjct: 445 GLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEA 504
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
+LY EML + PD FTY ALI +C+ L++A +L +EMV K + PD T+++L++
Sbjct: 505 CDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLING 564
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYN---------------SLMDGYCLVSEVNKA 301
L K+ +EAK +L + + P +TY+ SL+ G+C+ + +A
Sbjct: 565 LNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEA 624
Query: 302 KDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDG 361
+F SM + P+ +Y+IMI+G C+ + +A L EM + TVT +L+
Sbjct: 625 DQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKA 684
Query: 362 LCKSGRVS 369
L K G+V+
Sbjct: 685 LHKEGKVN 692
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 134/316 (42%), Gaps = 50/316 (15%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+DA+++ + +P ++ ++ +L+ + A+ + ++ GI PD T + L
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I +C Q + A + ++L+ G PD T+T L+ C+ G ++ ALQ H+ +V +G
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLM--------------------------------- 165
D VTY +LINGL K +TR A +L+
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSL 611
Query: 166 -----------------RQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRV 208
+ G+ KPD Y I+IH C+ + AY LY EM+
Sbjct: 612 IKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGF 671
Query: 209 LPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKT 268
L T AL+ ++ E ++ ++ +A +LV+ +EGN+
Sbjct: 672 LLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLD 731
Query: 269 VLAVMMKQGVKPDIIT 284
VLA M K G P+ I+
Sbjct: 732 VLAEMAKDGFLPNGIS 747
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 221 bits (562), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 112/341 (32%), Positives = 189/341 (55%), Gaps = 3/341 (0%)
Query: 40 FNKILTSLVKMKHYPTAISLSH-QLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKI 98
+N++L LV + +SH ++ GI PD+ T +LI C Q+ A +L +
Sbjct: 157 YNRMLNLLVDGNSL-KLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDM 215
Query: 99 LKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQT 158
G PD TFTT+M+G G + AL+ + +V G V+ ++++G CK G+
Sbjct: 216 PSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRV 275
Query: 159 RAALQLMRQIQGQ-LVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNA 217
AL ++++ Q PD + +++ CK V A + ML PDV+TYN+
Sbjct: 276 EDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNS 335
Query: 218 LIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQG 277
+I G C + ++KEA ++LD+M+T++ P+ T+N L+ L KE V+EA + V+ +G
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 278 VKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEAL 337
+ PD+ T+NSL+ G CL A ++F M +G P+ +Y+++I+ LC K+DEAL
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Query: 338 NLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
N+L +M+ +TY++LIDG CK+ + A E+ D++
Sbjct: 456 NMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 199/337 (59%), Gaps = 1/337 (0%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
F ++ ++ A+ + Q+ G S ++ ++++ +C + ++ A + + ++
Sbjct: 227 FTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMS 286
Query: 100 KR-GYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQT 158
+ G+ PD TF TL+ GLC G V+ A++ D ++ +G+ D TY +I+GLCK+G+
Sbjct: 287 NQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 346
Query: 159 RAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNAL 218
+ A++++ Q+ + P+ Y +I + CK+ V +A L + ++ +LPDV T+N+L
Sbjct: 347 KEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSL 406
Query: 219 IYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGV 278
I G C+ + A +L +EM +K PD +T+N+L+D+L +G + EA +L M G
Sbjct: 407 IQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466
Query: 279 KPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALN 338
+ITYN+L+DG+C ++ +A++IF+ M G++ N +Y+ +I+GLCK+++V++A
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQ 526
Query: 339 LLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
L+ +M + PD TY+SL+ C+ G + A ++V
Sbjct: 527 LMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIV 563
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 183/347 (52%), Gaps = 1/347 (0%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A+ I + +L+ P + +N +++ L K+ A+ + Q+ SP+ T LI+
Sbjct: 314 AIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIS 373
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
C + Q+ A + + +G PD TF +L++GLCL + A++ + + ++G
Sbjct: 374 TLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP 433
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
D+ TY +LI+ LC G+ AL +++Q++ V Y +I FCK +A ++
Sbjct: 434 DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIF 493
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
EM V + TYN LI G C ++++A +L+D+M+ + PD YT+N L+ +
Sbjct: 494 DEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRG 553
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSY 320
G++K+A ++ M G +PDI+TY +L+ G C V A + S+ +GI H+Y
Sbjct: 554 GDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAY 613
Query: 321 SIMINGLCKTKKVDEALNLLAEMDCKN-IIPDTVTYSSLIDGLCKSG 366
+ +I GL + +K EA+NL EM +N PD V+Y + GLC G
Sbjct: 614 NPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660
Score = 198 bits (503), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 179/345 (51%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P FN ++ L K H AI + + G PD++T +I+ C ++ A V
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 95 LAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCK 154
L +++ R P+T+T+ TL+ LC QV+ A + + ++G D T+ LI GLC
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 155 MGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFT 214
R A++L +++ + +PD Y ++I S C + +A N+ +M V T
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472
Query: 215 YNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMM 274
YN LI GFC ++ +EA ++ DEM + ++ T+N L+D L K V++A ++ M+
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532
Query: 275 KQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVD 334
+G KPD TYNSL+ +C ++ KA DI +M G P++ +Y +I+GLCK +V+
Sbjct: 533 MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592
Query: 335 EALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
A LL + K I Y+ +I GL + + + A L +++
Sbjct: 593 VASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREML 637
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 164/345 (47%), Gaps = 2/345 (0%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+AV + ++++ +P + +N ++++L K A L+ L GI PD+ T LI
Sbjct: 348 EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
C A + ++ +G PD T+ L+ LC G++ AL + G
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
+TY LI+G CK +TR A ++ +++ V + Y +I CK + V DA L
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+M+ PD +TYN+L+ FC +K+A ++ M + PD T+ L+ L K
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA-PNVH 318
G V+ A +L + +G+ YN ++ G + +A ++F M ++ A P+
Sbjct: 588 AGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAV 647
Query: 319 SYSIMINGLCKTKK-VDEALNLLAEMDCKNIIPDTVTYSSLIDGL 362
SY I+ GLC + EA++ L E+ K +P+ + L +GL
Sbjct: 648 SYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 150/311 (48%), Gaps = 3/311 (0%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P + FN ++ L +++ A+ L ++ G PD FT +LI+ C++ ++ A ++
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457
Query: 95 LAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCK 154
L ++ G IT+ TL+ G C + + A + D + G + VTY LI+GLCK
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Query: 155 MGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFT 214
+ A QLM Q+ + KPD Y ++ FC+ + A ++ M + PD+ T
Sbjct: 518 SRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVT 577
Query: 215 YNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMM 274
Y LI G C +++ A+KLL + K I+ + +N ++ L ++ EA + M+
Sbjct: 578 YGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREML 637
Query: 275 KQG-VKPDIITYNSLMDGYC-LVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKK 332
+Q PD ++Y + G C + +A D + ++G P S ++ GL T
Sbjct: 638 EQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLL-TLS 696
Query: 333 VDEALNLLAEM 343
++E L L M
Sbjct: 697 MEETLVKLVNM 707
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 148/328 (45%), Gaps = 4/328 (1%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
RN A+ +F + P +N ++ SL A+++ Q++ +G + + T
Sbjct: 414 RNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITY 473
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
LI+ +C + A + ++ G +++T+ TL+ GLC + +V+ A Q D ++
Sbjct: 474 NTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM 533
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
+G + D+ TY L+ C+ G + A +++ + +PD+ Y +I CK V
Sbjct: 534 EGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEV 593
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKN-IHPDAYTFNILV 254
A L + + + YN +I G + EA L EM+ +N PDA ++ I+
Sbjct: 594 ASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVF 653
Query: 255 DALGKEGN-VKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
L G ++EA L ++++G P+ + L +G +S + N + Q+
Sbjct: 654 RGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQK-- 711
Query: 314 APNVHSYSIMINGLCKTKKVDEALNLLA 341
A M+ GL K +K +AL L
Sbjct: 712 ARFSEEEVSMVKGLLKIRKFQDALATLG 739
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 89/182 (48%), Gaps = 11/182 (6%)
Query: 210 PDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTV 269
P+ Y ++ + K+L++M + TF IL+++ + E +V
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140
Query: 270 LAVMMKQ-GVKPDIITYNS----LMDGYCL-VSEVNKAKDIFNSMPQRGIAPNVHSYSIM 323
+ M+ + G+KPD YN L+DG L + E++ AK M GI P+V +++++
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAK-----MSVWGIKPDVSTFNVL 195
Query: 324 INGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVIFIFN 383
I LC+ ++ A+ +L +M ++PD T+++++ G + G + A + + ++
Sbjct: 196 IKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGC 255
Query: 384 VW 385
W
Sbjct: 256 SW 257
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/361 (31%), Positives = 201/361 (55%), Gaps = 1/361 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D+ ++ +L P I +NK++ K+ + A ++ G+ PD FT T L
Sbjct: 200 DEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSL 259
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I YC + + SAF V ++ +G R + + +T L+ GLC+ ++ A+ +
Sbjct: 260 IMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDEC 319
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
TY +LI LC + AL L+++++ +KP++ YT++I S C A
Sbjct: 320 FPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARE 379
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L +ML + ++P+V TYNALI G+C +++A +++ M ++ + P+ T+N L+
Sbjct: 380 LLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC 439
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
K NV +A VL M+++ V PD++TYNSL+DG C + A + + M RG+ P+
Sbjct: 440 K-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW 498
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+Y+ MI+ LCK+K+V+EA +L ++ K + P+ V Y++LIDG CK+G+V A +++ +
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 379 I 379
+
Sbjct: 559 L 559
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 188/339 (55%), Gaps = 1/339 (0%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
+N +L SL + + ++ + P+I+T ++N YC + A ++KI+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
+ G PD T+T+L+ G C + +A + + + +G R ++V Y LI+GLC +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 160 AALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
A+ L +++ P V YT++I S C + S+A NL EM + P++ TY LI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVK 279
C + ++A +LL +M+ K + P+ T+N L++ K G +++A V+ +M + +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 280 PDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNL 339
P+ TYN L+ GYC S V+KA + N M +R + P+V +Y+ +I+G C++ D A L
Sbjct: 426 PNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 340 LAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
L+ M+ + ++PD TY+S+ID LCKS RV A +L D +
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL 523
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 176/344 (51%), Gaps = 1/344 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+ A + ++L P +I +N ++ K A+ + ++ +SP+ T L
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNEL 434
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I YC ++ + A VL K+L+R PD +T+ +L+ G C +G +A + + +G
Sbjct: 435 IKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
DQ TY +I+ LCK + A L ++ + V P+V MYT +I +CK V +A+
Sbjct: 494 VPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHL 553
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
+ +ML++ LP+ T+NALI+G C +LKEAT L ++MV + P T IL+ L
Sbjct: 554 MLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLL 613
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
K+G+ A + M+ G KPD TY + + YC + A+D+ M + G++P++
Sbjct: 614 KDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLF 673
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGL 362
+YS +I G + + A ++L M P T+ SLI L
Sbjct: 674 TYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 198/394 (50%), Gaps = 34/394 (8%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
R D+A+ +F ++ P + + ++ SL + A++L +++ TGI P+I T
Sbjct: 302 RRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTY 361
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
T+LI+ C+Q + A +L ++L++G P+ IT+ L+ G C G ++ A+ + + +
Sbjct: 362 TVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMES 421
Query: 136 QGFRLDQVTYRILINGLCKM-----------------------------GQTR-----AA 161
+ + TY LI G CK GQ R +A
Sbjct: 422 RKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 162 LQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYG 221
+L+ + + + PD YT +I S CK K V +A +L+ + + V P+V Y ALI G
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541
Query: 222 FCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPD 281
+C ++ EA +L++M++KN P++ TFN L+ L +G +KEA + M+K G++P
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601
Query: 282 IITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLA 341
+ T L+ + + A F M G P+ H+Y+ I C+ ++ +A +++A
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMA 661
Query: 342 EMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
+M + PD TYSSLI G G+ + A++++
Sbjct: 662 KMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVL 695
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 180/384 (46%), Gaps = 19/384 (4%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N A+ + N++L P ++ +N ++ + ++ +A L ++ G+ PD +T T
Sbjct: 442 NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYT 501
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
+I+ C ++ A + + ++G P+ + +T L+ G C G+V A + ++++
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
+ +T+ LI+GLC G+ + A L ++ ++P V TI+IH KD A
Sbjct: 562 NCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHA 621
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
Y+ + +ML+ PD TY I +C +L +A ++ +M + PD +T++ L+
Sbjct: 622 YSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG 681
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMD---------------GYCLVS---EV 298
G G A VL M G +P T+ SL+ C +S E
Sbjct: 682 YGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEF 741
Query: 299 NKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMD-CKNIIPDTVTYSS 357
+ ++ M + + PN SY +I G+C+ + A + M + I P + +++
Sbjct: 742 DTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNA 801
Query: 358 LIDGLCKSGRVSHAWELVDDVIFI 381
L+ CK + + A ++VDD+I +
Sbjct: 802 LLSCCCKLKKHNEAAKVVDDMICV 825
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 187/414 (45%), Gaps = 54/414 (13%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N D A + + + P + ++ SL K K A L L+ G++P++ T
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYT 536
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
LI+ YC ++ A +L K+L + P+++TF L+ GLC +G+++ A + +V
Sbjct: 537 ALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G + T ILI+ L K G A +Q+ KPD YT I ++C++ + DA
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
++ ++M V PD+FTY++LI G+ + Q A +L M P +TF L+
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKH 716
Query: 257 L-----GKE----------GNVKEAKTV---LAVMMKQGVKPDIITYNSLMDGYCLVSEV 298
L GK+ N+ E TV L M++ V P+ +Y L+ G C V +
Sbjct: 717 LLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNL 776
Query: 299 NKAKDIFNSMPQ-RGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIP------- 350
A+ +F+ M + GI+P+ ++ +++ CK KK +EA ++ +M C +P
Sbjct: 777 RVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKV 836
Query: 351 ----------------------------DTVTYSSLIDGLCKSGRVSHAWELVD 376
D + + +IDG+ K G V +EL +
Sbjct: 837 LICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFN 890
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 111/200 (55%)
Query: 180 YTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMV 239
Y +++S + LV + +Y EML +V P+++TYN ++ G+C + ++EA + + ++V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 240 TKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVN 299
+ PD +T+ L+ + ++ A V M +G + + + Y L+ G C+ ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 300 KAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLI 359
+A D+F M P V +Y+++I LC +++ EALNL+ EM+ I P+ TY+ LI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 360 DGLCKSGRVSHAWELVDDVI 379
D LC + A EL+ ++
Sbjct: 366 DSLCSQCKFEKARELLGQML 385
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 145/326 (44%), Gaps = 19/326 (5%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A + +++++ P + ++ L+K + A S Q+ +G PD T T I
Sbjct: 585 EATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFI 644
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
YC + ++ A ++AK+ + G PD T+++L+KG GQ A + G
Sbjct: 645 QTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCE 704
Query: 140 LDQVTYRILINGLCKM--GQTRAA----------------LQLMRQIQGQLVKPDVEMYT 181
Q T+ LI L +M G+ + + ++L+ ++ V P+ + Y
Sbjct: 705 PSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYE 764
Query: 182 IIIHSFCKDKLVSDAYNLYSEMLARR-VLPDVFTYNALIYGFCIVSQLKEATKLLDEMVT 240
+I C+ + A ++ M + P +NAL+ C + + EA K++D+M+
Sbjct: 765 KLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMIC 824
Query: 241 KNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNK 300
P + +L+ L K+G + +V +++ G D + + ++DG V
Sbjct: 825 VGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEA 884
Query: 301 AKDIFNSMPQRGIAPNVHSYSIMING 326
++FN M + G + +YS++I G
Sbjct: 885 FYELFNVMEKNGCKFSSQTYSLLIEG 910
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 215 bits (547), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 113/354 (31%), Positives = 200/354 (56%), Gaps = 5/354 (1%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++A + NR+L P I + ++ L K+ A L +++ P+I L
Sbjct: 304 NEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTL 359
Query: 79 INCYCNQAQITSAFSVLAKILKR-GYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
I+ + ++ A +VL+ ++ G PD T+ +L+ G G V AL+ + +G
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
+ + +Y IL++G CK+G+ A ++ ++ +KP+ + +I +FCK+ + +A
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
++ EM + PDV+T+N+LI G C V ++K A LL +M+++ + + T+N L++A
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 539
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
+ G +KEA+ ++ M+ QG D ITYNSL+ G C EV+KA+ +F M + G AP+
Sbjct: 540 LRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 599
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
S +I+INGLC++ V+EA+ EM + PD VT++SLI+GLC++GR+
Sbjct: 600 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 199/361 (55%), Gaps = 5/361 (1%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A ++F +L P + F ++ + + +A+SL + G P+ LI+
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
++ A +L ++ G PD TF ++ GLC ++ A + + ++ +GF
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
D +TY L+NGLCK+G+ AA L +I KP++ ++ +IH F + DA +
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVL 376
Query: 201 SEML-ARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
S+M+ + ++PDV TYN+LIYG+ + A ++L +M K P+ Y++ ILVD K
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
G + EA VL M G+KP+ + +N L+ +C + +A +IF MP++G P+V++
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
++ +I+GLC+ ++ AL LL +M + ++ +TVTY++LI+ + G + A +LV++++
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 380 F 380
F
Sbjct: 557 F 557
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 191/366 (52%), Gaps = 5/366 (1%)
Query: 15 IRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAIS-LSHQLDFTGISPDIF 73
I D A +F R+ P P I+ FN ++ V A + LS + GI PD+
Sbjct: 335 IGRVDAAKDLFYRI----PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVC 390
Query: 74 TLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHV 133
T LI Y + + A VL + +G +P+ ++T L+ G C G++ A + +
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM 450
Query: 134 VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLV 193
A G + + V + LI+ CK + A+++ R++ + KPDV + +I C+ +
Sbjct: 451 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 510
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
A L +M++ V+ + TYN LI F ++KEA KL++EMV + D T+N L
Sbjct: 511 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSL 570
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
+ L + G V +A+++ M++ G P I+ N L++G C V +A + M RG
Sbjct: 571 IKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS 630
Query: 314 APNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWE 373
P++ +++ +INGLC+ ++++ L + ++ + I PDTVT+++L+ LCK G V A
Sbjct: 631 TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACL 690
Query: 374 LVDDVI 379
L+D+ I
Sbjct: 691 LLDEGI 696
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 180/345 (52%), Gaps = 1/345 (0%)
Query: 19 DDAVSIFNRLL-RMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTI 77
DDA ++ + ++ P + +N ++ K A+ + H + G P++++ TI
Sbjct: 370 DDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTI 429
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
L++ +C +I A++VL ++ G +P+T+ F L+ C ++ A++ + +G
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
+ D T+ LI+GLC++ + + AL L+R + + V + Y +I++F + + +A
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 549
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
L +EM+ + D TYN+LI G C ++ +A L ++M+ P + NIL++ L
Sbjct: 550 KLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGL 609
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
+ G V+EA M+ +G PDI+T+NSL++G C + +F + GI P+
Sbjct: 610 CRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDT 669
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGL 362
+++ +++ LCK V +A LL E +P+ T+S L+ +
Sbjct: 670 VTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 154/314 (49%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A+ + + + P + + ++ K+ A ++ +++ G+ P+ LI+
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
+C + +I A + ++ ++G +PD TF +L+ GLC +++ AL ++++G
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
+ VTY LIN + G+ + A +L+ ++ Q D Y +I C+ V A +L+
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
+ML P + N LI G C ++EA + EMV + PD TFN L++ L +
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSY 320
G +++ T+ + +G+ PD +T+N+LM C V A + + + G PN ++
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTW 707
Query: 321 SIMINGLCKTKKVD 334
SI++ + + +D
Sbjct: 708 SILLQSIIPQETLD 721
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 150/321 (46%), Gaps = 9/321 (2%)
Query: 65 FTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQ 124
F I+P F L L+ N + FS + GYR + L+ L NG+ +
Sbjct: 73 FHKITP--FQLYKLLELPLNVSTSMELFSWTGS--QNGYRHSFDVYQVLIGKLGANGEFK 128
Query: 125 TALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQL-VKPDVEMYTII 183
T + + +G + + ++ K G +LM +++ +P + Y ++
Sbjct: 129 TIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVV 188
Query: 184 IHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNI 243
+ A N++ +ML+R++ P +FT+ ++ FC V+++ A LL +M
Sbjct: 189 LEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGC 248
Query: 244 HPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKD 303
P++ + L+ +L K V EA +L M G PD T+N ++ G C +N+A
Sbjct: 249 VPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAK 308
Query: 304 IFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLC 363
+ N M RG AP+ +Y ++NGLCK +VD A +L + P+ V +++LI G
Sbjct: 309 MVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFV 364
Query: 364 KSGRVSHAWELVDDVIFIFNV 384
GR+ A ++ D++ + +
Sbjct: 365 THGRLDDAKAVLSDMVTSYGI 385
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 214 bits (546), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 205/377 (54%), Gaps = 9/377 (2%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVK-MKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+A +F ++L + N LT L K TAI + + G+ ++ + I+
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 252
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ C +I A +L + +GY PD I+++T++ G C G++ + + + +G
Sbjct: 253 IHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGL 312
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ + Y +I LC++ + A + ++ Q + PD +YT +I FCK + A
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
+ EM +R + PDV TY A+I GFC + + EA KL EM K + PD+ TF L++
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
K G++K+A V M++ G P+++TY +L+DG C +++ A ++ + M + G+ PN+
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+Y+ ++NGLCK+ ++EA+ L+ E + + DTVTY++L+D CKSG + A E++ ++
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 379 --------IFIFNVWMS 387
I FNV M+
Sbjct: 553 LGKGLQPTIVTFNVLMN 569
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 183/357 (51%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A F+ ++R P + + ++ K A +++ I+PD+ T T +I
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ +C + A + ++ +G PD++TFT L+ G C G ++ A + H+H++ G
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
+ VTY LI+GLCK G +A +L+ ++ ++P++ Y I++ CK + +A L
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
E A + D TY L+ +C ++ +A ++L EM+ K + P TFN+L++
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
G +++ + +L M+ +G+ P+ T+NSL+ YC+ + + A I+ M RG+ P+ +
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
Y ++ G CK + + EA L EM K TYS LI G K + A E+ D
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Score = 197 bits (501), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 181/359 (50%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A F + TP ++ + I++ ++ A L H++ G+ PD T T LIN
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
YC + AF V +++ G P+ +T+TTL+ GLC G + +A + + G +
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
+ TY ++NGLCK G A++L+ + + + D YT ++ ++CK + A +
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
EML + + P + T+N L+ GFC+ L++ KLL+ M+ K I P+A TFN LV
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSY 320
N+K A + M +GV PD TY +L+ G+C + +A +F M +G + +V +Y
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 321 SIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
S++I G K KK EA + +M + + D + D K R + +D++I
Sbjct: 670 SVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEII 728
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 176/330 (53%)
Query: 34 TPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFS 93
TP +I ++ ++ + L + G+ P+ + +I C ++ A
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 94 VLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLC 153
++++++G PDT+ +TTL+ G C G ++ A +F + ++ D +TY +I+G C
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 154 KMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVF 213
++G A +L ++ + ++PD +T +I+ +CK + DA+ +++ M+ P+V
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 214 TYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVM 273
TY LI G C L A +LL EM + P+ +T+N +V+ L K GN++EA ++
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 274 MKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKV 333
G+ D +TY +LMD YC E++KA++I M +G+ P + ++++++NG C +
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 334 DEALNLLAEMDCKNIIPDTVTYSSLIDGLC 363
++ LL M K I P+ T++SL+ C
Sbjct: 578 EDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 187/356 (52%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A+ +F + + +N ++ + ++ A L ++ G +PD+ + + ++N
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
YC ++ + ++ + ++G +P++ + +++ LC ++ A + ++ QG
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
D V Y LI+G CK G RAA + ++ + + PDV YT II FC+ + +A L+
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
EM + + PD T+ LI G+C +K+A ++ + M+ P+ T+ L+D L KE
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSY 320
G++ A +L M K G++P+I TYNS+++G C + +A + G+ + +Y
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 321 SIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
+ +++ CK+ ++D+A +L EM K + P VT++ L++G C G + +L++
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Score = 167 bits (424), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 171/324 (52%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A +F+ + P + F +++ K H A + + + G SP++ T T LI
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ C + + SA +L ++ K G +P+ T+ +++ GLC +G ++ A++ A G
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
D VTY L++ CK G+ A ++++++ G+ ++P + + ++++ FC ++ D L
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+ MLA+ + P+ T+N+L+ +CI + LK AT + +M ++ + PD T+ LV K
Sbjct: 584 LNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK 643
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
N+KEA + M +G + TY+ L+ G+ + +A+++F+ M + G+A +
Sbjct: 644 ARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEI 703
Query: 320 YSIMINGLCKTKKVDEALNLLAEM 343
+ + K K+ D ++ + E+
Sbjct: 704 FDFFSDTKYKGKRPDTIVDPIDEI 727
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 117/237 (49%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A + + + ++ P I +N I+ L K + A+ L + + G++ D T T L
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
++ YC ++ A +L ++L +G +P +TF LM G CL+G ++ + + ++A+G
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ T+ L+ C +AA + + + + V PD + Y ++ CK + + +A+
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
L+ EM + V TY+ LI GF + EA ++ D+M + + D F+ D
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 214 bits (546), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 205/377 (54%), Gaps = 9/377 (2%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVK-MKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+A +F ++L + N LT L K TAI + + G+ ++ + I+
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 252
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ C +I A +L + +GY PD I+++T++ G C G++ + + + +G
Sbjct: 253 IHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGL 312
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ + Y +I LC++ + A + ++ Q + PD +YT +I FCK + A
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
+ EM +R + PDV TY A+I GFC + + EA KL EM K + PD+ TF L++
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
K G++K+A V M++ G P+++TY +L+DG C +++ A ++ + M + G+ PN+
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+Y+ ++NGLCK+ ++EA+ L+ E + + DTVTY++L+D CKSG + A E++ ++
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 379 --------IFIFNVWMS 387
I FNV M+
Sbjct: 553 LGKGLQPTIVTFNVLMN 569
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 183/357 (51%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A F+ ++R P + + ++ K A +++ I+PD+ T T +I
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ +C + A + ++ +G PD++TFT L+ G C G ++ A + H+H++ G
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
+ VTY LI+GLCK G +A +L+ ++ ++P++ Y I++ CK + +A L
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
E A + D TY L+ +C ++ +A ++L EM+ K + P TFN+L++
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
G +++ + +L M+ +G+ P+ T+NSL+ YC+ + + A I+ M RG+ P+ +
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
Y ++ G CK + + EA L EM K TYS LI G K + A E+ D
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Score = 197 bits (501), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 181/359 (50%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A F + TP ++ + I++ ++ A L H++ G+ PD T T LIN
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
YC + AF V +++ G P+ +T+TTL+ GLC G + +A + + G +
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
+ TY ++NGLCK G A++L+ + + + D YT ++ ++CK + A +
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
EML + + P + T+N L+ GFC+ L++ KLL+ M+ K I P+A TFN LV
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSY 320
N+K A + M +GV PD TY +L+ G+C + +A +F M +G + +V +Y
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Query: 321 SIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
S++I G K KK EA + +M + + D + D K R + +D++I
Sbjct: 670 SVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEII 728
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 176/330 (53%)
Query: 34 TPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFS 93
TP +I ++ ++ + L + G+ P+ + +I C ++ A
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 94 VLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLC 153
++++++G PDT+ +TTL+ G C G ++ A +F + ++ D +TY +I+G C
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 154 KMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVF 213
++G A +L ++ + ++PD +T +I+ +CK + DA+ +++ M+ P+V
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 214 TYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVM 273
TY LI G C L A +LL EM + P+ +T+N +V+ L K GN++EA ++
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 274 MKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKV 333
G+ D +TY +LMD YC E++KA++I M +G+ P + ++++++NG C +
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 334 DEALNLLAEMDCKNIIPDTVTYSSLIDGLC 363
++ LL M K I P+ T++SL+ C
Sbjct: 578 EDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 187/356 (52%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A+ +F + + +N ++ + ++ A L ++ G +PD+ + + ++N
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
YC ++ + ++ + ++G +P++ + +++ LC ++ A + ++ QG
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
D V Y LI+G CK G RAA + ++ + + PDV YT II FC+ + +A L+
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
EM + + PD T+ LI G+C +K+A ++ + M+ P+ T+ L+D L KE
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSY 320
G++ A +L M K G++P+I TYNS+++G C + +A + G+ + +Y
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 321 SIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
+ +++ CK+ ++D+A +L EM K + P VT++ L++G C G + +L++
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Score = 167 bits (424), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 171/324 (52%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A +F+ + P + F +++ K H A + + + G SP++ T T LI
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ C + + SA +L ++ K G +P+ T+ +++ GLC +G ++ A++ A G
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
D VTY L++ CK G+ A ++++++ G+ ++P + + ++++ FC ++ D L
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+ MLA+ + P+ T+N+L+ +CI + LK AT + +M ++ + PD T+ LV K
Sbjct: 584 LNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK 643
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
N+KEA + M +G + TY+ L+ G+ + +A+++F+ M + G+A +
Sbjct: 644 ARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEI 703
Query: 320 YSIMINGLCKTKKVDEALNLLAEM 343
+ + K K+ D ++ + E+
Sbjct: 704 FDFFSDTKYKGKRPDTIVDPIDEI 727
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 117/237 (49%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A + + + ++ P I +N I+ L K + A+ L + + G++ D T T L
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
++ YC ++ A +L ++L +G +P +TF LM G CL+G ++ + + ++A+G
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ T+ L+ C +AA + + + + V PD + Y ++ CK + + +A+
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
L+ EM + V TY+ LI GF + EA ++ D+M + + D F+ D
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 178/341 (52%), Gaps = 3/341 (0%)
Query: 38 IEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAK 97
+E N L +V+ + + G PDI T LI +C + A +L
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 98 ILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQ 157
+ G PD IT+ ++ G C G++ AL D + D VTY ++ LC G+
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGK 219
Query: 158 TRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNA 217
+ A++++ ++ + PDV YTI+I + C+D V A L EM R PDV TYN
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 218 LIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQG 277
L+ G C +L EA K L++M + P+ T NI++ ++ G +A+ +LA M+++G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 278 VKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEAL 337
P ++T+N L++ C + +A DI MPQ G PN SY+ +++G CK KK+D A+
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 338 NLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
L M + PD VTY++++ LCK G+V A E+++ +
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/351 (31%), Positives = 186/351 (52%), Gaps = 3/351 (0%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A I L P +I +N +++ K A+S+ LD +SPD+ T ++
Sbjct: 156 AAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILR 212
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
C+ ++ A VL ++L+R PD IT+T L++ C + V A++ D + +G
Sbjct: 213 SLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTP 272
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
D VTY +L+NG+CK G+ A++ + + +P+V + II+ S C DA L
Sbjct: 273 DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLL 332
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
++ML + P V T+N LI C L A +L++M P++ ++N L+ KE
Sbjct: 333 ADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 392
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSY 320
+ A L M+ +G PDI+TYN+++ C +V A +I N + +G +P + +Y
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 452
Query: 321 SIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
+ +I+GL K K +A+ LL EM K++ PDT+TYSSL+ GL + G+V A
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 194/344 (56%), Gaps = 3/344 (0%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P II ++ ++ A + L+ +G PD+ T ++I+ YC +I +A SV
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 95 LAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCK 154
L ++ PD +T+ T+++ LC +G+++ A++ D ++ + D +TY ILI C+
Sbjct: 195 LDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 155 MGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFT 214
A++L+ +++ + PDV Y ++++ CK+ + +A ++M + P+V T
Sbjct: 252 DSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311
Query: 215 YNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMM 274
+N ++ C + +A KLL +M+ K P TFNIL++ L ++G + A +L M
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371
Query: 275 KQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVD 334
+ G +P+ ++YN L+ G+C ++++A + M RG P++ +Y+ M+ LCK KV+
Sbjct: 372 QHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 335 EALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+A+ +L ++ K P +TY+++IDGL K+G+ A +L+D++
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 192/358 (53%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A+ + +R+L+ P +I + ++ + + A+ L ++ G +PD+ T +L+N
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
C + ++ A L + G +P+ IT +++ +C G+ A + ++ +GF
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
VT+ ILIN LC+ G A+ ++ ++ +P+ Y ++H FCK+K + A
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
M++R PD+ TYN ++ C ++++A ++L+++ +K P T+N ++D L K
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSY 320
G +A +L M + +KPD ITY+SL+ G +V++A F+ + GI PN ++
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF 522
Query: 321 SIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+ ++ GLCK+++ D A++ L M + P+ +Y+ LI+GL G A EL++++
Sbjct: 523 NSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 171/329 (51%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A+ + + + TP ++ +N ++ + K AI + + +G P++ T I++
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
C+ + A +LA +L++G+ P +TF L+ LC G + A+ + + G +
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
+ ++Y L++G CK + A++ + ++ + PD+ Y ++ + CKD V DA +
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
+++ ++ P + TYN +I G + +A KLLDEM K++ PD T++ LV L +E
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSY 320
G V EA + G++P+ +T+NS+M G C + ++A D M RG PN SY
Sbjct: 498 GKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSY 557
Query: 321 SIMINGLCKTKKVDEALNLLAEMDCKNII 349
+I+I GL EAL LL E+ K ++
Sbjct: 558 TILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 142/295 (48%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D+A+ N + P +I N IL S+ + A L + G SP + T IL
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
IN C + + A +L K+ + G +P+++++ L+ G C ++ A+++ + +V++G
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D VTY ++ LCK G+ A++++ Q+ + P + Y +I K A
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L EM A+ + PD TY++L+ G ++ EA K E I P+A TFN ++ L
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
K A L M+ +G KP+ +Y L++G +A ++ N + +G+
Sbjct: 531 KSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 145/304 (47%), Gaps = 16/304 (5%)
Query: 93 SVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGL 152
S +K+ G F TL +G + H V F L+ V + +
Sbjct: 58 SAASKVESSGLNGRAQKFETLS-----SGYSNSNGNGHYSSVNSSFALEDVESNNHLRQM 112
Query: 153 CKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDV 212
+ G+ + + + PD+ T +I FC+ A + + +PDV
Sbjct: 113 VRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDV 172
Query: 213 FTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAV 272
TYN +I G+C ++ A +LD M ++ PD T+N ++ +L G +K+A VL
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 273 MMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKK 332
M+++ PD+ITY L++ C S V A + + M RG P+V +Y++++NG+CK +
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 333 VDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV--------IFIFNV 384
+DEA+ L +M P+ +T++ ++ +C +GR A +L+ D+ + FN+
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 385 WMSY 388
+++
Sbjct: 350 LINF 353
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 97/194 (50%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
+ D A+ R++ P I+ +N +LT+L K A+ + +QL G SP + T
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 452
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
+I+ + A +L ++ + +PDTIT+++L+ GL G+V A++F
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFER 512
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
G R + VT+ ++ GLCK QT A+ + + + KP+ YTI+I + + +
Sbjct: 513 MGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKE 572
Query: 196 AYNLYSEMLARRVL 209
A L +E+ + ++
Sbjct: 573 ALELLNELCNKGLM 586
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 192/365 (52%), Gaps = 1/365 (0%)
Query: 14 SIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIF 73
++RN AV + +L P + +N ++ KM A + ++ SPD
Sbjct: 136 TLRNIPKAVRVM-EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTV 194
Query: 74 TLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHV 133
T I+I C++ ++ A VL ++L +P IT+T L++ L G V AL+ D +
Sbjct: 195 TYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEM 254
Query: 134 VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLV 193
+++G + D TY +I G+CK G A +++R ++ + +PDV Y I++ +
Sbjct: 255 LSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKW 314
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
+ L ++M + + P+V TY+ LI C +++EA LL M K + PDAY+++ L
Sbjct: 315 EEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPL 374
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
+ A +EG + A L M+ G PDI+ YN+++ C + ++A +IF + + G
Sbjct: 375 IAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGC 434
Query: 314 APNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWE 373
+PN SY+ M + L + AL+++ EM I PD +TY+S+I LC+ G V A+E
Sbjct: 435 SPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFE 494
Query: 374 LVDDV 378
L+ D+
Sbjct: 495 LLVDM 499
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 190/398 (47%), Gaps = 35/398 (8%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
DDA + +R+ +P + +N ++ SL A+ + +QL P + T TIL
Sbjct: 175 DDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTIL 234
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I + + A ++ ++L RG +PD T+ T+++G+C G V A + ++ +G
Sbjct: 235 IEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGC 294
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D ++Y IL+ L G+ +LM ++ + P+V Y+I+I + C+D + +A N
Sbjct: 295 EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMN 354
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L M + + PD ++Y+ LI FC +L A + L+ M++ PD +N ++ L
Sbjct: 355 LLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLC 414
Query: 259 KEGNVKEAKTVLA-----------------------------------VMMKQGVKPDII 283
K G +A + MM G+ PD I
Sbjct: 415 KNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEI 474
Query: 284 TYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM 343
TYNS++ C V++A ++ M P+V +Y+I++ G CK ++++A+N+L M
Sbjct: 475 TYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESM 534
Query: 344 DCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVIFI 381
P+ TY+ LI+G+ +G + A EL +D++ I
Sbjct: 535 VGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI 572
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 156/297 (52%), Gaps = 1/297 (0%)
Query: 83 CNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQ 142
C + +L ++++GY PD I T L+KG + A++ + ++ + + D
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME-ILEKFGQPDV 158
Query: 143 VTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSE 202
Y LING CKM + A +++ +++ + PD Y I+I S C + A + ++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 203 MLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGN 262
+L+ P V TY LI + + EA KL+DEM+++ + PD +T+N ++ + KEG
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 263 VKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSI 322
V A ++ + +G +PD+I+YN L+ + + + + M PNV +YSI
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 323 MINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+I LC+ K++EA+NLL M K + PD +Y LI C+ GR+ A E ++ +I
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 101/196 (51%), Gaps = 1/196 (0%)
Query: 183 IIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKN 242
I H C+ ++ +L M+ + PDV LI GF + + +A +++ E++ K
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKF 153
Query: 243 IHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAK 302
PD + +N L++ K + +A VL M + PD +TYN ++ C +++ A
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 303 DIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGL 362
+ N + P V +Y+I+I VDEAL L+ EM + + PD TY+++I G+
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 363 CKSGRVSHAWELVDDV 378
CK G V A+E+V ++
Sbjct: 274 CKEGMVDRAFEMVRNL 289
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 72/147 (48%)
Query: 18 ADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTI 77
AD A+ IF +L + +P +N + ++L A+ + ++ GI PD T
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNS 478
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
+I+C C + + AF +L + + P +T+ ++ G C +++ A+ + +V G
Sbjct: 479 MISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQL 164
R ++ TY +LI G+ G A++L
Sbjct: 539 CRPNETTYTVLIEGIGFAGYRAEAMEL 565
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 192/366 (52%), Gaps = 7/366 (1%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A S F +L+ P + N ++ L + A+ L+ ++ G+ PD T IL
Sbjct: 239 DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL 298
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
+ I+ A+ V+ +L +G PD IT+T L+ G C G + L ++++GF
Sbjct: 299 AKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF 358
Query: 139 RLDQVT-YRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
L+ + ++++GLCK G+ AL L Q++ + PD+ Y+I+IH CK A
Sbjct: 359 ELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 418
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
LY EM +R+LP+ T+ AL+ G C L EA LLD +++ D +NI++D
Sbjct: 419 WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGY 478
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
K G ++EA + V+++ G+ P + T+NSL+ GYC + +A+ I + + G+AP+V
Sbjct: 479 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV 538
Query: 318 HSYSIMINGLC---KTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
SY+ +++ TK +DE L EM + I P VTYS + GLC+ + + +
Sbjct: 539 VSYTTLMDAYANCGNTKSIDE---LRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHV 595
Query: 375 VDDVIF 380
+ + IF
Sbjct: 596 LRERIF 601
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 171/371 (46%), Gaps = 36/371 (9%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
++ ++ L + + A+ ++ I P + + +++ YC + A S +L
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
K G P + L+ GLCL G + AL+ + G D VTY IL G +G
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 160 AALQLMRQIQGQLVKPDVEMYTII------------------------------------ 183
A +++R + + + PDV YTI+
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Query: 184 IHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNI 243
+ CK + +A +L+++M A + PD+ Y+ +I+G C + + A L DEM K I
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 244 HPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKD 303
P++ T L+ L ++G + EA+++L ++ G DI+ YN ++DGY + +A +
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 489
Query: 304 IFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLC 363
+F + + GI P+V +++ +I G CKT+ + EA +L + + P V+Y++L+D
Sbjct: 490 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 549
Query: 364 KSGRVSHAWEL 374
G EL
Sbjct: 550 NCGNTKSIDEL 560
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 131/239 (54%), Gaps = 1/239 (0%)
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
++ TY +++GLC+ + A+ +R + + + P V + I+ +CK V A + +
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
+L ++P V+++N LI G C+V + EA +L +M + PD+ T+NIL
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN-VHS 319
G + A V+ M+ +G+ PD+ITY L+ G C + ++ + M RG N +
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
S+M++GLCKT ++DEAL+L +M + PD V YS +I GLCK G+ A L D++
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 152/307 (49%), Gaps = 1/307 (0%)
Query: 74 TLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHV 133
T + +++ C Q ++ A L + P ++F ++M G C G V A F V
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 134 VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLV 193
+ G ++ ILINGLC +G AL+L + V+PD Y I+ F ++
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYT-FNI 252
S A+ + +ML + + PDV TY L+ G C + + LL +M+++ ++ ++
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 253 LVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG 312
++ L K G + EA ++ M G+ PD++ Y+ ++ G C + + + A +++ M +
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 313 IAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAW 372
I PN ++ ++ GLC+ + EA +LL + D V Y+ +IDG KSG + A
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488
Query: 373 ELVDDVI 379
EL VI
Sbjct: 489 ELFKVVI 495
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 138/310 (44%), Gaps = 23/310 (7%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A S+ + L+ T I+ +N ++ K A+ L + TGI+P + T LI
Sbjct: 451 EARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 510
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
YC I A +L I G P +++TTLM G ++ + + A+G
Sbjct: 511 YGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIP 570
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
VTY ++ GLC+ + ++R+ I CK L
Sbjct: 571 PTNVTYSVIFKGLCRGWKHENCNHVLRER---------------IFEKCKQGL------- 608
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+M + + PD TYN +I C V L A L+ M ++N+ + T+NIL+D+L
Sbjct: 609 -RDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCV 667
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
G +++A + + + +Q V Y +L+ +C+ + A +F+ + RG ++
Sbjct: 668 YGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRD 727
Query: 320 YSIMINGLCK 329
YS +IN LC+
Sbjct: 728 YSAVINRLCR 737
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 111/192 (57%), Gaps = 13/192 (6%)
Query: 191 KLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLD---EMVTKNIHPDA 247
++V D+ + +M + + +YN+++Y F +E K+ D E+ KN H
Sbjct: 138 RMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF------RETDKMWDVYKEIKDKNEH--- 188
Query: 248 YTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNS 307
T++ +VD L ++ +++A L + + P ++++NS+M GYC + V+ AK F +
Sbjct: 189 -TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCT 247
Query: 308 MPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGR 367
+ + G+ P+V+S++I+INGLC + EAL L ++M+ + PD+VTY+ L G G
Sbjct: 248 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 307
Query: 368 VSHAWELVDDVI 379
+S AWE++ D++
Sbjct: 308 ISGAWEVIRDML 319
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 114/219 (52%), Gaps = 7/219 (3%)
Query: 161 ALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIY 220
+L ++++++ Q + + Y +++ F + +++Y E+ + + TY+ ++
Sbjct: 143 SLYILKKMKDQNLNVSTQSYNSVLYHF---RETDKMWDVYKEIKDK----NEHTYSTVVD 195
Query: 221 GFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKP 280
G C +L++A L K+I P +FN ++ K G V AK+ ++K G+ P
Sbjct: 196 GLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVP 255
Query: 281 DIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLL 340
+ ++N L++G CLV + +A ++ + M + G+ P+ +Y+I+ G + A ++
Sbjct: 256 SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVI 315
Query: 341 AEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+M K + PD +TY+ L+ G C+ G + L+ D++
Sbjct: 316 RDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDML 354
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 202 bits (513), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 192/366 (52%), Gaps = 7/366 (1%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A S F +L+ P + N ++ L + A+ L+ ++ G+ PD T IL
Sbjct: 239 DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL 298
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
+ I+ A+ V+ +L +G PD IT+T L+ G C G + L ++++GF
Sbjct: 299 AKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF 358
Query: 139 RLDQVT-YRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
L+ + ++++GLCK G+ AL L Q++ + PD+ Y+I+IH CK A
Sbjct: 359 ELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 418
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
LY EM +R+LP+ T+ AL+ G C L EA LLD +++ D +NI++D
Sbjct: 419 WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGY 478
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
K G ++EA + V+++ G+ P + T+NSL+ GYC + +A+ I + + G+AP+V
Sbjct: 479 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV 538
Query: 318 HSYSIMINGLC---KTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
SY+ +++ TK +DE L EM + I P VTYS + GLC+ + + +
Sbjct: 539 VSYTTLMDAYANCGNTKSIDE---LRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHV 595
Query: 375 VDDVIF 380
+ + IF
Sbjct: 596 LRERIF 601
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 171/371 (46%), Gaps = 36/371 (9%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
++ ++ L + + A+ ++ I P + + +++ YC + A S +L
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
K G P + L+ GLCL G + AL+ + G D VTY IL G +G
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 160 AALQLMRQIQGQLVKPDVEMYTII------------------------------------ 183
A +++R + + + PDV YTI+
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Query: 184 IHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNI 243
+ CK + +A +L+++M A + PD+ Y+ +I+G C + + A L DEM K I
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 244 HPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKD 303
P++ T L+ L ++G + EA+++L ++ G DI+ YN ++DGY + +A +
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 489
Query: 304 IFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLC 363
+F + + GI P+V +++ +I G CKT+ + EA +L + + P V+Y++L+D
Sbjct: 490 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 549
Query: 364 KSGRVSHAWEL 374
G EL
Sbjct: 550 NCGNTKSIDEL 560
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 131/239 (54%), Gaps = 1/239 (0%)
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
++ TY +++GLC+ + A+ +R + + + P V + I+ +CK V A + +
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
+L ++P V+++N LI G C+V + EA +L +M + PD+ T+NIL
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN-VHS 319
G + A V+ M+ +G+ PD+ITY L+ G C + ++ + M RG N +
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
S+M++GLCKT ++DEAL+L +M + PD V YS +I GLCK G+ A L D++
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 152/307 (49%), Gaps = 1/307 (0%)
Query: 74 TLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHV 133
T + +++ C Q ++ A L + P ++F ++M G C G V A F V
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 134 VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLV 193
+ G ++ ILINGLC +G AL+L + V+PD Y I+ F ++
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYT-FNI 252
S A+ + +ML + + PDV TY L+ G C + + LL +M+++ ++ ++
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 253 LVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG 312
++ L K G + EA ++ M G+ PD++ Y+ ++ G C + + + A +++ M +
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 313 IAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAW 372
I PN ++ ++ GLC+ + EA +LL + D V Y+ +IDG KSG + A
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488
Query: 373 ELVDDVI 379
EL VI
Sbjct: 489 ELFKVVI 495
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 138/310 (44%), Gaps = 23/310 (7%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A S+ + L+ T I+ +N ++ K A+ L + TGI+P + T LI
Sbjct: 451 EARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 510
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
YC I A +L I G P +++TTLM G ++ + + A+G
Sbjct: 511 YGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIP 570
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
VTY ++ GLC+ + ++R+ I CK L
Sbjct: 571 PTNVTYSVIFKGLCRGWKHENCNHVLRER---------------IFEKCKQGL------- 608
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+M + + PD TYN +I C V L A L+ M ++N+ + T+NIL+D+L
Sbjct: 609 -RDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCV 667
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
G +++A + + + +Q V Y +L+ +C+ + A +F+ + RG ++
Sbjct: 668 YGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRD 727
Query: 320 YSIMINGLCK 329
YS +IN LC+
Sbjct: 728 YSAVINRLCR 737
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 111/192 (57%), Gaps = 13/192 (6%)
Query: 191 KLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLD---EMVTKNIHPDA 247
++V D+ + +M + + +YN+++Y F +E K+ D E+ KN H
Sbjct: 138 RMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF------RETDKMWDVYKEIKDKNEH--- 188
Query: 248 YTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNS 307
T++ +VD L ++ +++A L + + P ++++NS+M GYC + V+ AK F +
Sbjct: 189 -TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCT 247
Query: 308 MPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGR 367
+ + G+ P+V+S++I+INGLC + EAL L ++M+ + PD+VTY+ L G G
Sbjct: 248 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 307
Query: 368 VSHAWELVDDVI 379
+S AWE++ D++
Sbjct: 308 ISGAWEVIRDML 319
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 114/219 (52%), Gaps = 7/219 (3%)
Query: 161 ALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIY 220
+L ++++++ Q + + Y +++ F + +++Y E+ + + TY+ ++
Sbjct: 143 SLYILKKMKDQNLNVSTQSYNSVLYHF---RETDKMWDVYKEIKDK----NEHTYSTVVD 195
Query: 221 GFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKP 280
G C +L++A L K+I P +FN ++ K G V AK+ ++K G+ P
Sbjct: 196 GLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVP 255
Query: 281 DIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLL 340
+ ++N L++G CLV + +A ++ + M + G+ P+ +Y+I+ G + A ++
Sbjct: 256 SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVI 315
Query: 341 AEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+M K + PD +TY+ L+ G C+ G + L+ D++
Sbjct: 316 RDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDML 354
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 202 bits (513), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 182/345 (52%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P I+ +N ++++ A L + + G SP ++T +IN C + A V
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 95 LAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCK 154
A++L+ G PD+ T+ +L+ C G V + + ++ D V + +++ +
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 155 MGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFT 214
G AL ++ + PD +YTI+I +C+ ++S A NL +EML + DV T
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT 447
Query: 215 YNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMM 274
YN +++G C L EA KL +EM + + PD+YT IL+D K GN++ A + M
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK 507
Query: 275 KQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVD 334
++ ++ D++TYN+L+DG+ V +++ AK+I+ M + I P SYSI++N LC +
Sbjct: 508 EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLA 567
Query: 335 EALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
EA + EM KNI P + +S+I G C+SG S ++ +I
Sbjct: 568 EAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Score = 181 bits (460), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 193/358 (53%), Gaps = 2/358 (0%)
Query: 24 IFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYC 83
+F+ + P ++ F+ +++ + + A+ + + G+ PD TILI YC
Sbjct: 362 VFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYC 421
Query: 84 NQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQV 143
+ I+ A ++ ++L++G D +T+ T++ GLC + A + + + + D
Sbjct: 422 RKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSY 481
Query: 144 TYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEM 203
T ILI+G CK+G + A++L ++++ + ++ DV Y ++ F K + A ++++M
Sbjct: 482 TLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADM 541
Query: 204 LARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNV 263
+++ +LP +Y+ L+ C L EA ++ DEM++KNI P N ++ + GN
Sbjct: 542 VSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNA 601
Query: 264 KEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMP--QRGIAPNVHSYS 321
+ ++ L M+ +G PD I+YN+L+ G+ ++KA + M Q G+ P+V +Y+
Sbjct: 602 SDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYN 661
Query: 322 IMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+++G C+ ++ EA +L +M + + PD TY+ +I+G ++ A+ + D+++
Sbjct: 662 SILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEML 719
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 187/364 (51%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
R +A F L T I N ++ SLV++ A + ++ +G+ +++TL
Sbjct: 179 RKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTL 238
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
I++N C ++ + L+++ ++G PD +T+ TL+ G ++ A + + +
Sbjct: 239 NIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPG 298
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
+GF TY +INGLCK G+ A ++ ++ + PD Y ++ CK V +
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVE 358
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
++S+M +R V+PD+ +++++ F L +A + + + PD + IL+
Sbjct: 359 TEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQ 418
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
++G + A + M++QG D++TYN+++ G C + +A +FN M +R + P
Sbjct: 419 GYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFP 478
Query: 316 NVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
+ ++ +I+I+G CK + A+ L +M K I D VTY++L+DG K G + A E+
Sbjct: 479 DSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIW 538
Query: 376 DDVI 379
D++
Sbjct: 539 ADMV 542
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 176/355 (49%), Gaps = 2/355 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+ A +F +LR +P + +L K + + + PD+ + +
Sbjct: 322 ERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
++ + + A + + G PD + +T L++G C G + A+ + ++ QG
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+D VTY +++GLCK A +L ++ + + PD TI+I CK + +A
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L+ +M +R+ DV TYN L+ GF V + A ++ +MV+K I P +++ILV+AL
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC 561
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
+G++ EA V M+ + +KP ++ NS++ GYC + + M G P+
Sbjct: 562 SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 621
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCK--NIIPDTVTYSSLIDGLCKSGRVSHA 371
SY+ +I G + + + +A L+ +M+ + ++PD TY+S++ G C+ ++ A
Sbjct: 622 SYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEA 676
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 174/337 (51%), Gaps = 2/337 (0%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N D A+ FN + P + + ++ + A++L +++ G + D+ T
Sbjct: 390 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYN 449
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
+++ C + + A + ++ +R PD+ T T L+ G C G +Q A++ + +
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
RLD VTY L++G K+G A ++ + + + P Y+I++++ C +++A
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
+ ++ EM+++ + P V N++I G+C + L++M+++ PD ++N L+
Sbjct: 570 FRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYG 629
Query: 257 LGKEGNVKEAKTVLAVMMKQ--GVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
+E N+ +A ++ M ++ G+ PD+ TYNS++ G+C +++ +A+ + M +RG+
Sbjct: 630 FVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVN 689
Query: 315 PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPD 351
P+ +Y+ MING + EA + EM + PD
Sbjct: 690 PDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 173/372 (46%), Gaps = 15/372 (4%)
Query: 3 SFLRLKNSLPPSIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQ 62
S L + NSL + N S+F+ L+R K++ A +L
Sbjct: 146 SRLEIVNSLDSTFSNCGSNDSVFDLLIR------------TYVQARKLREAHEAFTL--- 190
Query: 63 LDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQ 122
L G + I LI + A+ V +I + G + T ++ LC +G+
Sbjct: 191 LRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGK 250
Query: 123 VQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTI 182
++ F V +G D VTY LI+ G A +LM + G+ P V Y
Sbjct: 251 MEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNT 310
Query: 183 IIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKN 242
+I+ CK A +++EML + PD TY +L+ C + E K+ +M +++
Sbjct: 311 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRD 370
Query: 243 IHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAK 302
+ PD F+ ++ + GN+ +A + + G+ PD + Y L+ GYC ++ A
Sbjct: 371 VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAM 430
Query: 303 DIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGL 362
++ N M Q+G A +V +Y+ +++GLCK K + EA L EM + + PD+ T + LIDG
Sbjct: 431 NLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGH 490
Query: 363 CKSGRVSHAWEL 374
CK G + +A EL
Sbjct: 491 CKLGNLQNAMEL 502
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 158/321 (49%), Gaps = 2/321 (0%)
Query: 58 SLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGL 117
SL G + +F L LI Y ++ A + +G+ L+ L
Sbjct: 153 SLDSTFSNCGSNDSVFDL--LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSL 210
Query: 118 CLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDV 177
G V+ A + + G ++ T I++N LCK G+ + Q+Q + V PD+
Sbjct: 211 VRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDI 270
Query: 178 EMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDE 237
Y +I ++ L+ +A+ L + M + P V+TYN +I G C + + A ++ E
Sbjct: 271 VTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAE 330
Query: 238 MVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSE 297
M+ + PD+ T+ L+ K+G+V E + V + M + V PD++ ++S+M +
Sbjct: 331 MLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGN 390
Query: 298 VNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSS 357
++KA FNS+ + G+ P+ Y+I+I G C+ + A+NL EM + D VTY++
Sbjct: 391 LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNT 450
Query: 358 LIDGLCKSGRVSHAWELVDDV 378
++ GLCK + A +L +++
Sbjct: 451 ILHGLCKRKMLGEADKLFNEM 471
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 90/199 (45%), Gaps = 2/199 (1%)
Query: 15 IRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFT 74
+ + D A I+ ++ P I ++ ++ +L H A + ++ I P +
Sbjct: 528 VGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMI 587
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
+I YC + S L K++ G+ PD I++ TL+ G + A +
Sbjct: 588 CNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKME 647
Query: 135 AQ--GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKL 192
+ G D TY +++G C+ Q + A ++R++ + V PD YT +I+ F
Sbjct: 648 EEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDN 707
Query: 193 VSDAYNLYSEMLARRVLPD 211
+++A+ ++ EML R PD
Sbjct: 708 LTEAFRIHDEMLQRGFSPD 726
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 83/165 (50%)
Query: 215 YNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMM 274
++ LI + +L+EA + + +K N L+ +L + G V+ A V +
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 275 KQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVD 334
+ GV ++ T N +++ C ++ K + + ++G+ P++ +Y+ +I+ ++
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 335 EALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
EA L+ M K P TY+++I+GLCK G+ A E+ +++
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 201 bits (512), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 194/359 (54%), Gaps = 1/359 (0%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
++S FN ++ P FN +LT +V + S ++ + + + D+++ ILI
Sbjct: 113 SISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-NKSKVVLDVYSFGILIK 171
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
C +I +F +L ++ + G+ P+ + +TTL+ G C G+++ A + G
Sbjct: 172 GCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVA 231
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
++ TY +LINGL K G + ++ ++Q V P++ Y +++ CKD DA+ ++
Sbjct: 232 NERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVF 291
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
EM R V ++ TYN LI G C +L EA K++D+M + I+P+ T+N L+D
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGV 351
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSY 320
G + +A ++ + +G+ P ++TYN L+ G+C + + A + M +RGI P+ +Y
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411
Query: 321 SIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+I+I+ ++ +++A+ L M+ ++PD TYS LI G C G+++ A L ++
Sbjct: 412 TILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMV 470
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 176/353 (49%)
Query: 27 RLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQA 86
L +P ++ + ++ K A L ++ G+ + T T+LIN
Sbjct: 188 ELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNG 247
Query: 87 QITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYR 146
F + K+ + G P+ T+ +M LC +G+ + A Q D + +G + VTY
Sbjct: 248 VKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYN 307
Query: 147 ILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLAR 206
LI GLC+ + A +++ Q++ + P++ Y +I FC + A +L ++ +R
Sbjct: 308 TLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSR 367
Query: 207 RVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEA 266
+ P + TYN L+ GFC A K++ EM + I P T+ IL+D + N+++A
Sbjct: 368 GLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKA 427
Query: 267 KTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMING 326
+ M + G+ PD+ TY+ L+ G+C+ ++N+A +F SM ++ PN Y+ MI G
Sbjct: 428 IQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILG 487
Query: 327 LCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
CK AL LL EM+ K + P+ +Y +I+ LCK + A LV+ +I
Sbjct: 488 YCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMI 540
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 155/310 (50%)
Query: 43 ILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRG 102
++ L K + ++ G+ P+++T ++N C + AF V ++ +RG
Sbjct: 239 LINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG 298
Query: 103 YRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAAL 162
+ +T+ TL+ GLC ++ A + D + + G + +TY LI+G C +G+ AL
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358
Query: 163 QLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGF 222
L R ++ + + P + Y I++ FC+ S A + EM R + P TY LI F
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF 418
Query: 223 CIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDI 282
+++A +L M + PD +T+++L+ +G + EA + M+++ +P+
Sbjct: 419 ARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNE 478
Query: 283 ITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAE 342
+ YN+++ GYC +A + M ++ +APNV SY MI LCK +K EA L+ +
Sbjct: 479 VIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEK 538
Query: 343 MDCKNIIPDT 352
M I P T
Sbjct: 539 MIDSGIDPST 548
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 150/289 (51%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P + +N ++ L K A + ++ G+S +I T LI C + ++ A V
Sbjct: 266 PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKV 325
Query: 95 LAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCK 154
+ ++ G P+ IT+ TL+ G C G++ AL + ++G VTY IL++G C+
Sbjct: 326 VDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCR 385
Query: 155 MGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFT 214
G T A +++++++ + +KP YTI+I +F + + A L M ++PDV T
Sbjct: 386 KGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHT 445
Query: 215 YNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMM 274
Y+ LI+GFCI Q+ EA++L MV KN P+ +N ++ KEG+ A +L M
Sbjct: 446 YSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEME 505
Query: 275 KQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIM 323
++ + P++ +Y +++ C + +A+ + M GI P+ S++
Sbjct: 506 EKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 128/261 (49%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
DA +F+ + + I+ +N ++ L + A + Q+ GI+P++ T LI
Sbjct: 286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLI 345
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ +C ++ A S+ + RG P +T+ L+ G C G A + + +G +
Sbjct: 346 DGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK 405
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
+VTY ILI+ + A+QL ++ + PDV Y+++IH FC +++A L
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+ M+ + P+ YN +I G+C A KLL EM K + P+ ++ +++ L K
Sbjct: 466 FKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCK 525
Query: 260 EGNVKEAKTVLAVMMKQGVKP 280
E KEA+ ++ M+ G+ P
Sbjct: 526 ERKSKEAERLVEKMIDSGIDP 546
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 117/238 (49%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++A + +++ P +I +N ++ + A+SL L G+SP + T IL
Sbjct: 320 NEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNIL 379
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
++ +C + + A ++ ++ +RG +P +T+T L+ + ++ A+Q + G
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGL 439
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D TY +LI+G C GQ A +L + + + +P+ +Y +I +CK+ A
Sbjct: 440 VPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALK 499
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
L EM + + P+V +Y +I C + KEA +L+++M+ I P +++ A
Sbjct: 500 LLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 112/210 (53%), Gaps = 1/210 (0%)
Query: 169 QGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQL 228
+ + K +Y +II+S+ + + ++ + + ++EM+ +P +N L+ S
Sbjct: 86 ESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSF 145
Query: 229 KEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSL 288
+ +E +K + D Y+F IL+ + G ++++ +L + + G P+++ Y +L
Sbjct: 146 NQWWSFFNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTL 204
Query: 289 MDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNI 348
+DG C E+ KAKD+F M + G+ N +Y+++INGL K + + +M +
Sbjct: 205 IDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGV 264
Query: 349 IPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
P+ TY+ +++ LCK GR A+++ D++
Sbjct: 265 FPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 170/309 (55%)
Query: 67 GISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA 126
G +P ++T ++ + S +S L ++LKR PD TF L+ LC G + +
Sbjct: 193 GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 252
Query: 127 LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS 186
+ G+ VTY +++ CK G+ +AA++L+ ++ + V DV Y ++IH
Sbjct: 253 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHD 312
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
C+ ++ Y L +M R + P+ TYN LI GF ++ A++LL+EM++ + P+
Sbjct: 313 LCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN 372
Query: 247 AYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFN 306
TFN L+D EGN KEA + +M +G+ P ++Y L+DG C +E + A+ +
Sbjct: 373 HVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYM 432
Query: 307 SMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
M + G+ +Y+ MI+GLCK +DEA+ LL EM I PD VTYS+LI+G CK G
Sbjct: 433 RMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVG 492
Query: 367 RVSHAWELV 375
R A E+V
Sbjct: 493 RFKTAKEIV 501
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 189/386 (48%), Gaps = 9/386 (2%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
D++ IF + P + N IL S+VK + S ++ I PD+ T ILI
Sbjct: 181 DSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILI 240
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
N C + + ++ K+ K GY P +T+ T++ C G+ + A++ DH+ ++G
Sbjct: 241 NVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVD 300
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
D TY +LI+ LC+ + L+R ++ +++ P+ Y +I+ F + V A L
Sbjct: 301 ADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQL 360
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+EML+ + P+ T+NALI G KEA K+ M K + P ++ +L+D L K
Sbjct: 361 LNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCK 420
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
A+ M + GV ITY ++DG C +++A + N M + GI P++ +
Sbjct: 421 NAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVT 480
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
YS +ING CK + A ++ + + P+ + YS+LI C+ G + A + + +I
Sbjct: 481 YSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI 540
Query: 380 --------FIFNVWM-SYAKAIKLTR 396
F FNV + S KA K+
Sbjct: 541 LEGHTRDHFTFNVLVTSLCKAGKVAE 566
Score = 178 bits (451), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 179/347 (51%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A + N +L +P + FN ++ + ++ A+ + + ++ G++P + +L++
Sbjct: 357 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 416
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
C A+ A ++ + G IT+T ++ GLC NG + A+ + + G
Sbjct: 417 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP 476
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
D VTY LING CK+G+ + A +++ +I + P+ +Y+ +I++ C+ + +A +Y
Sbjct: 477 DIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIY 536
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
M+ D FT+N L+ C ++ EA + + M + I P+ +F+ L++ G
Sbjct: 537 EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNS 596
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSY 320
G +A +V M K G P TY SL+ G C + +A+ S+ A + Y
Sbjct: 597 GEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMY 656
Query: 321 SIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGR 367
+ ++ +CK+ + +A++L EM ++I+PD+ TY+SLI GLC+ G+
Sbjct: 657 NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 703
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 172/345 (49%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P + +N ++ A L +++ G+SP+ T LI+ + ++ A +
Sbjct: 336 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 395
Query: 95 LAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCK 154
+ +G P +++ L+ GLC N + A F+ + G + ++TY +I+GLCK
Sbjct: 396 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 455
Query: 155 MGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFT 214
G A+ L+ ++ + PD+ Y+ +I+ FCK A + + + P+
Sbjct: 456 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 515
Query: 215 YNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMM 274
Y+ LIY C + LKEA ++ + M+ + D +TFN+LV +L K G V EA+ + M
Sbjct: 516 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 575
Query: 275 KQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVD 334
G+ P+ ++++ L++GY E KA +F+ M + G P +Y ++ GLCK +
Sbjct: 576 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 635
Query: 335 EALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
EA L + DTV Y++L+ +CKSG ++ A L +++
Sbjct: 636 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMV 680
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 174/361 (48%), Gaps = 1/361 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A + R+ R I + ++ L K A+ L +++ GI PDI T + L
Sbjct: 425 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 484
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
IN +C + +A ++ +I + G P+ I ++TL+ C G ++ A++ ++ ++ +G
Sbjct: 485 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGH 544
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D T+ +L+ LCK G+ A + MR + + P+ + +I+ + A++
Sbjct: 545 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS 604
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
++ EM P FTY +L+ G C L+EA K L + D +N L+ A+
Sbjct: 605 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC 664
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG-IAPNV 317
K GN+ +A ++ M+++ + PD TY SL+ G C + A RG + PN
Sbjct: 665 KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNK 724
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDD 377
Y+ ++G+ K + + +MD PD VT +++IDG + G++ +L+ +
Sbjct: 725 VMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPE 784
Query: 378 V 378
+
Sbjct: 785 M 785
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 155/310 (50%), Gaps = 2/310 (0%)
Query: 69 SPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQ 128
+P ++ ILI Y + I + + + G+ P T ++ + +G+ +
Sbjct: 162 NPSVYD--ILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 219
Query: 129 FHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFC 188
F ++ + D T+ ILIN LC G + LM++++ P + Y ++H +C
Sbjct: 220 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 279
Query: 189 KDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAY 248
K A L M ++ V DV TYN LI+ C +++ + LL +M + IHP+
Sbjct: 280 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 339
Query: 249 TFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM 308
T+N L++ EG V A +L M+ G+ P+ +T+N+L+DG+ +A +F M
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 399
Query: 309 PQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRV 368
+G+ P+ SY ++++GLCK + D A M + +TY+ +IDGLCK+G +
Sbjct: 400 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 459
Query: 369 SHAWELVDDV 378
A L++++
Sbjct: 460 DEAVVLLNEM 469
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 171/352 (48%), Gaps = 1/352 (0%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N +A+ +F + TP + + +L L K + A ++ G+ T T
Sbjct: 388 NFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 447
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
+I+ C + A +L ++ K G PD +T++ L+ G C G+ +TA + +
Sbjct: 448 GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV 507
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G + + Y LI C+MG + A+++ + + D + +++ S CK V++A
Sbjct: 508 GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 567
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
M + +LP+ +++ LI G+ + +A + DEM HP +T+ L+
Sbjct: 568 EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG 627
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
L K G+++EA+ L + D + YN+L+ C + KA +F M QR I P+
Sbjct: 628 LCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 687
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCK-NIIPDTVTYSSLIDGLCKSGR 367
++Y+ +I+GLC+ K A+ E + + N++P+ V Y+ +DG+ K+G+
Sbjct: 688 SYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQ 739
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 171/387 (44%), Gaps = 36/387 (9%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A S+F+ + ++ P + +L L K H A L + D L+
Sbjct: 602 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 661
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
C + A S+ ++++R PD+ T+T+L+ GLC G+ A+ F A+G L
Sbjct: 662 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL 721
Query: 141 -DQVTYRILINGLCKMGQTRAALQLMRQIQ---------------------GQLVK---- 174
++V Y ++G+ K GQ +A + Q+ G++ K
Sbjct: 722 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 781
Query: 175 ----------PDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCI 224
P++ Y I++H + K K VS ++ LY ++ +LPD T ++L+ G C
Sbjct: 782 LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE 841
Query: 225 VSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIIT 284
+ L+ K+L + + + D YTFN+L+ G + A ++ VM G+ D T
Sbjct: 842 SNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDT 901
Query: 285 YNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMD 344
++++ +++ + + M ++GI+P Y +INGLC+ + A + EM
Sbjct: 902 CDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMI 961
Query: 345 CKNIIPDTVTYSSLIDGLCKSGRVSHA 371
I P V S+++ L K G+ A
Sbjct: 962 AHKICPPNVAESAMVRALAKCGKADEA 988
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 155/332 (46%)
Query: 31 MSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITS 90
+ TP I+ N ++ +M L ++ P++ T IL++ Y + +++
Sbjct: 753 LGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVST 812
Query: 91 AFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILIN 150
+F + I+ G PD +T +L+ G+C + ++ L+ + +G +D+ T+ +LI+
Sbjct: 813 SFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLIS 872
Query: 151 GLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLP 210
C G+ A L++ + + D + ++ ++ ++ + EM + + P
Sbjct: 873 KCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISP 932
Query: 211 DVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVL 270
+ Y LI G C V +K A + +EM+ I P + +V AL K G EA +L
Sbjct: 933 ESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLL 992
Query: 271 AVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKT 330
M+K + P I ++ +LM C V +A ++ M G+ ++ SY+++I GLC
Sbjct: 993 RFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAK 1052
Query: 331 KKVDEALNLLAEMDCKNIIPDTVTYSSLIDGL 362
+ A L EM + + TY +LI GL
Sbjct: 1053 GDMALAFELYEEMKGDGFLANATTYKALIRGL 1084
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 117/209 (55%)
Query: 171 QLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKE 230
+L + +Y I+I + ++ ++ D+ ++ M P V+T NA++ +
Sbjct: 157 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 216
Query: 231 ATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMD 290
L EM+ + I PD TFNIL++ L EG+ +++ ++ M K G P I+TYN+++
Sbjct: 217 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 276
Query: 291 GYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIP 350
YC A ++ + M +G+ +V +Y+++I+ LC++ ++ + LL +M + I P
Sbjct: 277 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 336
Query: 351 DTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+ VTY++LI+G G+V A +L+++++
Sbjct: 337 NEVTYNTLINGFSNEGKVLIASQLLNEML 365
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 154/359 (42%), Gaps = 1/359 (0%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTG-ISPDIFTL 75
N AVS+F +++ S P + +++ L + AI + + + G + P+
Sbjct: 668 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 727
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
T ++ Q + ++ G+ PD +T ++ G G+++ +
Sbjct: 728 TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 787
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
Q + TY IL++G K + L R I + PD ++ C+ ++
Sbjct: 788 QNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEI 847
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
+ + R V D +T+N LI C ++ A L+ M + I D T + +V
Sbjct: 848 GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVS 907
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
L + +E++ VL M KQG+ P+ Y L++G C V ++ A + M I P
Sbjct: 908 VLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 967
Query: 316 NVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
+ S M+ L K K DEA LL M ++P ++++L+ CK+G V A EL
Sbjct: 968 PNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALEL 1026
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 73/182 (40%), Gaps = 36/182 (19%)
Query: 61 HQLDFTGISPDIFTLTILINCYCNQAQITSAFSV----------------------LAK- 97
H++ GISP+ LIN C I +AF V LAK
Sbjct: 923 HEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKC 982
Query: 98 ------------ILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTY 145
+LK P +FTTLM C NG V AL+ + G +LD V+Y
Sbjct: 983 GKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSY 1042
Query: 146 RILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS-FCKDKLVSDAYNLYSEML 204
+LI GLC G A +L +++G + Y +I ++ S A + ++L
Sbjct: 1043 NVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLL 1102
Query: 205 AR 206
AR
Sbjct: 1103 AR 1104
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 198 bits (503), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 192/341 (56%), Gaps = 5/341 (1%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
+N + SL K + A + + G+SP+ L L++ + + ++ A ++L +
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSF 165
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQ-FHDHVVAQGFRLDQVTYRILINGLCKMGQT 158
+ + +L+ L +V+ A++ F +H+ Q D T+ ILI GLC +G+
Sbjct: 166 E--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-DTKTFNILIRGLCGVGKA 222
Query: 159 RAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVL-PDVFTYNA 217
AL+L+ + G +PD+ Y +I FCK ++ A ++ ++ + V PDV TY +
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 218 LIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQG 277
+I G+C +++EA+ LLD+M+ I+P TFN+LVD K G + A+ + M+ G
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 278 VKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEAL 337
PD++T+ SL+DGYC V +V++ ++ M RG+ PN +YSI+IN LC ++ +A
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402
Query: 338 NLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
LL ++ K+IIP Y+ +IDG CK+G+V+ A +V+++
Sbjct: 403 ELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 173/336 (51%), Gaps = 3/336 (0%)
Query: 41 NKILTSLVKMKHYPTAISL-SHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
N +L +LVK+ A+ L L F + D T ILI C + A +L +
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-DTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQ-FHDHVVAQGFRLDQVTYRILINGLCKMGQT 158
G PD +T+ TL++G C + ++ A + F D D VTY +I+G CK G+
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 159 RAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNAL 218
R A L+ + + P + +++ + K + A + +M++ PDV T+ +L
Sbjct: 294 REASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSL 353
Query: 219 IYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGV 278
I G+C V Q+ + +L +EM + + P+A+T++IL++AL E + +A+ +L + + +
Sbjct: 354 IDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDI 413
Query: 279 KPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALN 338
P YN ++DG+C +VN+A I M ++ P+ +++I+I G C ++ EA++
Sbjct: 414 IPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVS 473
Query: 339 LLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
+ +M PD +T SSL+ L K+G A+ L
Sbjct: 474 IFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 177/341 (51%), Gaps = 14/341 (4%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+DA+ +F+ LR FN ++ L + A+ L + G PDI T L
Sbjct: 188 EDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTL 247
Query: 79 INCYCNQAQITSAFSVLAKILKRGY--RPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
I +C ++ A S + K +K G PD +T+T+++ G C G+++ A D ++
Sbjct: 248 IQGFCKSNELNKA-SEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 306
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVK----PDVEMYTIIIHSFCKDKL 192
G VT+ +L++G K G+ A +I+G+++ PDV +T +I +C+
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTA----EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362
Query: 193 VSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNI 252
VS + L+ EM AR + P+ FTY+ LI C ++L +A +LL ++ +K+I P + +N
Sbjct: 363 VSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNP 422
Query: 253 LVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG 312
++D K G V EA ++ M K+ KPD IT+ L+ G+C+ + +A IF+ M G
Sbjct: 423 VIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Query: 313 IAPNVHSYSIMINGLCKTKKVDEA--LNLLA-EMDCKNIIP 350
+P+ + S +++ L K EA LN +A + N++P
Sbjct: 483 CSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVP 523
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 156/307 (50%), Gaps = 6/307 (1%)
Query: 14 SIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGI-SPDI 72
+ A+ A+ + + P I+ +N ++ K A + + + SPD+
Sbjct: 218 GVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDV 277
Query: 73 FTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDH 132
T T +I+ YC ++ A S+L +L+ G P +TF L+ G G++ TA +
Sbjct: 278 VTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGK 337
Query: 133 VVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKL 192
+++ G D VT+ LI+G C++GQ +L ++ + + P+ Y+I+I++ C +
Sbjct: 338 MISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENR 397
Query: 193 VSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNI 252
+ A L ++ ++ ++P F YN +I GFC ++ EA +++EM K PD TF I
Sbjct: 398 LLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTI 457
Query: 253 LVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIF--NSMPQ 310
L+ +G + EA ++ M+ G PD IT +SL+ CL+ + AK+ + N + +
Sbjct: 458 LIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS--CLL-KAGMAKEAYHLNQIAR 514
Query: 311 RGIAPNV 317
+G + NV
Sbjct: 515 KGQSNNV 521
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 33/170 (19%)
Query: 242 NIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPD-------------------- 281
NI +T+N+L +L K G A + M GV P+
Sbjct: 98 NIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFA 157
Query: 282 -------------IITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLC 328
+ NSL++ + V A +F+ + + +++I+I GLC
Sbjct: 158 TALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLC 217
Query: 329 KTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
K ++AL LL M PD VTY++LI G CKS ++ A E+ DV
Sbjct: 218 GVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 198 bits (503), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 192/341 (56%), Gaps = 5/341 (1%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
+N + SL K + A + + G+SP+ L L++ + + ++ A ++L +
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSF 165
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQ-FHDHVVAQGFRLDQVTYRILINGLCKMGQT 158
+ + +L+ L +V+ A++ F +H+ Q D T+ ILI GLC +G+
Sbjct: 166 E--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-DTKTFNILIRGLCGVGKA 222
Query: 159 RAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVL-PDVFTYNA 217
AL+L+ + G +PD+ Y +I FCK ++ A ++ ++ + V PDV TY +
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 218 LIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQG 277
+I G+C +++EA+ LLD+M+ I+P TFN+LVD K G + A+ + M+ G
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 278 VKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEAL 337
PD++T+ SL+DGYC V +V++ ++ M RG+ PN +YSI+IN LC ++ +A
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402
Query: 338 NLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
LL ++ K+IIP Y+ +IDG CK+G+V+ A +V+++
Sbjct: 403 ELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 173/336 (51%), Gaps = 3/336 (0%)
Query: 41 NKILTSLVKMKHYPTAISL-SHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
N +L +LVK+ A+ L L F + D T ILI C + A +L +
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-DTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQ-FHDHVVAQGFRLDQVTYRILINGLCKMGQT 158
G PD +T+ TL++G C + ++ A + F D D VTY +I+G CK G+
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 159 RAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNAL 218
R A L+ + + P + +++ + K + A + +M++ PDV T+ +L
Sbjct: 294 REASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSL 353
Query: 219 IYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGV 278
I G+C V Q+ + +L +EM + + P+A+T++IL++AL E + +A+ +L + + +
Sbjct: 354 IDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDI 413
Query: 279 KPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALN 338
P YN ++DG+C +VN+A I M ++ P+ +++I+I G C ++ EA++
Sbjct: 414 IPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVS 473
Query: 339 LLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
+ +M PD +T SSL+ L K+G A+ L
Sbjct: 474 IFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 177/341 (51%), Gaps = 14/341 (4%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+DA+ +F+ LR FN ++ L + A+ L + G PDI T L
Sbjct: 188 EDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTL 247
Query: 79 INCYCNQAQITSAFSVLAKILKRGY--RPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
I +C ++ A S + K +K G PD +T+T+++ G C G+++ A D ++
Sbjct: 248 IQGFCKSNELNKA-SEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 306
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVK----PDVEMYTIIIHSFCKDKL 192
G VT+ +L++G K G+ A +I+G+++ PDV +T +I +C+
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTA----EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362
Query: 193 VSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNI 252
VS + L+ EM AR + P+ FTY+ LI C ++L +A +LL ++ +K+I P + +N
Sbjct: 363 VSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNP 422
Query: 253 LVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG 312
++D K G V EA ++ M K+ KPD IT+ L+ G+C+ + +A IF+ M G
Sbjct: 423 VIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Query: 313 IAPNVHSYSIMINGLCKTKKVDEA--LNLLA-EMDCKNIIP 350
+P+ + S +++ L K EA LN +A + N++P
Sbjct: 483 CSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVP 523
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 156/307 (50%), Gaps = 6/307 (1%)
Query: 14 SIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGI-SPDI 72
+ A+ A+ + + P I+ +N ++ K A + + + SPD+
Sbjct: 218 GVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDV 277
Query: 73 FTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDH 132
T T +I+ YC ++ A S+L +L+ G P +TF L+ G G++ TA +
Sbjct: 278 VTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGK 337
Query: 133 VVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKL 192
+++ G D VT+ LI+G C++GQ +L ++ + + P+ Y+I+I++ C +
Sbjct: 338 MISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENR 397
Query: 193 VSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNI 252
+ A L ++ ++ ++P F YN +I GFC ++ EA +++EM K PD TF I
Sbjct: 398 LLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTI 457
Query: 253 LVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIF--NSMPQ 310
L+ +G + EA ++ M+ G PD IT +SL+ CL+ + AK+ + N + +
Sbjct: 458 LIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS--CLL-KAGMAKEAYHLNQIAR 514
Query: 311 RGIAPNV 317
+G + NV
Sbjct: 515 KGQSNNV 521
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 33/170 (19%)
Query: 242 NIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPD-------------------- 281
NI +T+N+L +L K G A + M GV P+
Sbjct: 98 NIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFA 157
Query: 282 -------------IITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLC 328
+ NSL++ + V A +F+ + + +++I+I GLC
Sbjct: 158 TALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLC 217
Query: 329 KTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
K ++AL LL M PD VTY++LI G CKS ++ A E+ DV
Sbjct: 218 GVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 184/334 (55%), Gaps = 3/334 (0%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
++ +L SL K+ A +++ G + ++N C +A ++KIL
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL--DQVTYRILINGLCKMGQ 157
K G+ D+ T+L+ G C ++ AL+ D V+++ + V+Y ILI+GLC++G+
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFD-VMSKEVTCAPNSVSYSILIHGLCEVGR 281
Query: 158 TRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNA 217
A L Q+ + +P YT++I + C L+ A+NL+ EM+ R P+V TY
Sbjct: 282 LEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTV 341
Query: 218 LIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQG 277
LI G C +++EA + +MV I P T+N L++ K+G V A +L VM K+
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA 401
Query: 278 VKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEAL 337
KP++ T+N LM+G C V + KA + M G++P++ SY+++I+GLC+ ++ A
Sbjct: 402 CKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAY 461
Query: 338 NLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
LL+ M+C +I PD +T++++I+ CK G+ A
Sbjct: 462 KLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVA 495
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 192/361 (53%), Gaps = 1/361 (0%)
Query: 17 NADDAVSIFNRLLR-MSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
N DA+ +F+ + + ++ P + ++ ++ L ++ A L Q+ G P T
Sbjct: 245 NLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
T+LI C++ I AF++ +++ RG +P+ T+T L+ GLC +G+++ A +V
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
+TY LING CK G+ A +L+ ++ + KP+V + ++ C+
Sbjct: 365 DRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYK 424
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
A +L ML + PD+ +YN LI G C + A KLL M +I PD TF +++
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
A K+G A L +M+++G+ D +T +L+DG C V + A I ++ + I
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILT 544
Query: 316 NVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
HS +++++ L K KV E L +L +++ ++P VTY++L+DGL +SG ++ ++ ++
Sbjct: 545 TPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRIL 604
Query: 376 D 376
+
Sbjct: 605 E 605
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 182/357 (50%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A ++F+ ++ P + + ++ L + A + ++ I P + T L
Sbjct: 318 DKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNAL 377
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
IN YC ++ AF +L + KR +P+ TF LM+GLC G+ A+ ++ G
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL 437
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D V+Y +LI+GLC+ G A +L+ + ++PD +T II++FCK A
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASA 497
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
ML + + D T LI G C V + ++A +L+ +V I ++ N+++D L
Sbjct: 498 FLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLS 557
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
K VKE +L + K G+ P ++TY +L+DG ++ + I M G PNV+
Sbjct: 558 KGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVY 617
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
Y+I+INGLC+ +V+EA LL+ M + P+ VTY+ ++ G +G++ A E V
Sbjct: 618 PYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETV 674
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 176/344 (51%), Gaps = 1/344 (0%)
Query: 37 IIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLA 96
+I++ I+ +L K + A ++ G D T L+ +C + A V
Sbjct: 195 MIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFD 254
Query: 97 KILKR-GYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKM 155
+ K P++++++ L+ GLC G+++ A D + +G + TY +LI LC
Sbjct: 255 VMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDR 314
Query: 156 GQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTY 215
G A L ++ + KP+V YT++I C+D + +A + +M+ R+ P V TY
Sbjct: 315 GLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITY 374
Query: 216 NALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMK 275
NALI G+C ++ A +LL M + P+ TFN L++ L + G +A +L M+
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLD 434
Query: 276 QGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDE 335
G+ PDI++YN L+DG C +N A + +SM I P+ +++ +IN CK K D
Sbjct: 435 NGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADV 494
Query: 336 ALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
A L M K I D VT ++LIDG+CK G+ A +++ ++
Sbjct: 495 ASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 181/377 (48%), Gaps = 18/377 (4%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A + + + + P + FN+++ L ++ A+ L ++ G+SPDI + +LI+
Sbjct: 390 AFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLID 449
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
C + + +A+ +L+ + PD +TFT ++ C G+ A F ++ +G L
Sbjct: 450 GLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISL 509
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
D+VT LI+G+CK+G+TR AL ++ + + +I+ K V + +
Sbjct: 510 DEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAML 569
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
++ ++P V TY L+ G + + ++L+ M P+ Y + I+++ L +
Sbjct: 570 GKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQF 629
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSY 320
G V+EA+ +L+ M GV P+ +TY ++ GY ++++A + +M +RG N Y
Sbjct: 630 GRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIY 689
Query: 321 SIMINGLCKTKK-VDEALN------LLAEMD--CKNIIPDTVTYSS---------LIDGL 362
S ++ G ++K +D + L E D C N + V L+ L
Sbjct: 690 SSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRL 749
Query: 363 CKSGRVSHAWELVDDVI 379
CK GR + +LV +V+
Sbjct: 750 CKEGRTDESNDLVQNVL 766
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/412 (21%), Positives = 174/412 (42%), Gaps = 54/412 (13%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
AV + R+L +P I+ +N ++ L + H TA L ++ I PD T T +IN
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
+C Q + A + L +L++G D +T TTL+ G+C G+ + AL + +V
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILT 544
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
+ ++++ L K + + L ++ +I + P V YT ++ + ++ ++ +
Sbjct: 545 TPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRIL 604
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
M LP+V+ Y +I G C +++EA KLL M + P+ T+ ++V
Sbjct: 605 ELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNN 664
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGY---------------------------- 292
G + A + M+++G + + Y+SL+ G+
Sbjct: 665 GKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECI 724
Query: 293 -------------------------CLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGL 327
C +++ D+ ++ +RG+ + I++
Sbjct: 725 NELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLE-KAMDIIMESY 783
Query: 328 CKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
C KK + + L+ + +P ++ +I GL K G A ELV +++
Sbjct: 784 CSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELL 835
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 195 bits (495), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 194/392 (49%), Gaps = 41/392 (10%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A ++ R+L +P ++ + ++ L + A + Q+ G+ P I T + LI+
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLID 434
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
+C + S F++ ++K GY PD + + L+ GL G + A++F ++ Q RL
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL 494
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYT------------------- 181
+ V + LI+G C++ + AL++ R + +KPDV +T
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPT 554
Query: 182 ----------------------IIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
++IH K + DA ++ ++ ++ PD+ TYN +I
Sbjct: 555 IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 614
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVK 279
G+C + +L EA ++ + + P+ T IL+ L K ++ A + ++M ++G K
Sbjct: 615 CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 674
Query: 280 PDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNL 339
P+ +TY LMD + ++ + +F M ++GI+P++ SYSI+I+GLCK +VDEA N+
Sbjct: 675 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 734
Query: 340 LAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
+ ++PD V Y+ LI G CK GR+ A
Sbjct: 735 FHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 766
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 175/349 (50%), Gaps = 7/349 (2%)
Query: 37 IIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLA 96
I+ NK+L L + + LS LD G +P++ T LIN +C + ++ AF +
Sbjct: 252 IVSCNKVLKGLSVDQIEVASRLLSLVLD-CGPAPNVVTFCTLINGFCKRGEMDRAFDLFK 310
Query: 97 KILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMG 156
+ +RG PD I ++TL+ G G + + + +G +LD V + I+ K G
Sbjct: 311 VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG 370
Query: 157 QTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYN 216
A + +++ Q + P+V YTI+I C+D + +A+ +Y ++L R + P + TY+
Sbjct: 371 DLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYS 430
Query: 217 ALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQ 276
+LI GFC L+ L ++M+ PD + +LVD L K+G + A M+ Q
Sbjct: 431 SLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ 490
Query: 277 GVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSY------SIMINGLCKT 330
++ +++ +NSL+DG+C ++ ++A +F M GI P+V ++ SIM + CK
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKH 550
Query: 331 KKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
K L L M I D + +I L K R+ A + +++I
Sbjct: 551 MKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 599
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 182/429 (42%), Gaps = 76/429 (17%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A +F + + P +I ++ ++ K L Q G+ D+ +
Sbjct: 303 DRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSST 362
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ Y + +A V ++L +G P+ +T+T L+KGLC +G++ A + ++ +G
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
VTY LI+G CK G R+ L + PDV +Y +++ K L+ A
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR 482
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTF-------- 250
+ML + + +V +N+LI G+C +++ EA K+ M I PD TF
Sbjct: 483 FSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSI 542
Query: 251 ---------------------------------NILVDALGKEGNVKEAKTVLAVMMKQG 277
N+++ L K +++A +++
Sbjct: 543 MEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK 602
Query: 278 VKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEAL 337
++PDI+TYN+++ GYC + +++A+ IF + PN + +I+I+ LCK +D A+
Sbjct: 603 MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAI 662
Query: 338 -----------------------------------NLLAEMDCKNIIPDTVTYSSLIDGL 362
L EM K I P V+YS +IDGL
Sbjct: 663 RMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGL 722
Query: 363 CKSGRVSHA 371
CK GRV A
Sbjct: 723 CKRGRVDEA 731
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 167/309 (54%), Gaps = 5/309 (1%)
Query: 66 TGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQT 125
+G+S F L L +C + ++T A +++RG+R ++ ++KGL ++ Q++
Sbjct: 215 SGVSAHGFVLDAL---FC-KGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEV 269
Query: 126 ALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIH 185
A + V+ G + VT+ LING CK G+ A L + ++ + ++PD+ Y+ +I
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 186 SFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHP 245
+ K ++ + L+S+ L + V DV +++ I + L A+ + M+ + I P
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 246 DAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIF 305
+ T+ IL+ L ++G + EA + ++K+G++P I+TY+SL+DG+C + ++
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 306 NSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKS 365
M + G P+V Y ++++GL K + A+ +M ++I + V ++SLIDG C+
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 366 GRVSHAWEL 374
R A ++
Sbjct: 510 NRFDEALKV 518
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 172/367 (46%), Gaps = 10/367 (2%)
Query: 20 DAVSIFNRLLRM----SPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
D + + +RLL + P P ++ F ++ K A L ++ GI PD+
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
+ LI+ Y + + ++ L +G + D + F++ + +G + TA + ++
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
QG + VTY ILI GLC+ G+ A + QI + ++P + Y+ +I FCK +
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
+ LY +M+ PDV Y L+ G + A + +M+ ++I + FN L+D
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLM------DGYCLVSEVNKAKDIFNSMP 309
+ EA V +M G+KPD+ T+ ++M D +C + +F+ M
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQ 564
Query: 310 QRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVS 369
+ I+ ++ +++I+ L K ++++A + + PD VTY+++I G C R+
Sbjct: 565 RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLD 624
Query: 370 HAWELVD 376
A + +
Sbjct: 625 EAERIFE 631
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 138/276 (50%), Gaps = 2/276 (0%)
Query: 97 KILKRGYRPDTIT-FTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKM 155
K+ + G P ++ ++ L G+V AL FH V+ +GFR+ V+ ++ GL +
Sbjct: 206 KLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SV 264
Query: 156 GQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTY 215
Q A +L+ + P+V + +I+ FCK + A++L+ M R + PD+ Y
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 216 NALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMK 275
+ LI G+ L KL + + K + D F+ +D K G++ A V M+
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 276 QGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDE 335
QG+ P+++TY L+ G C + +A ++ + +RG+ P++ +YS +I+G CK +
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 336 ALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
L +M PD V Y L+DGL K G + HA
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA 480
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 136/296 (45%), Gaps = 6/296 (2%)
Query: 27 RLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT------ILIN 80
++L S ++ FN ++ ++ + A+ + + GI PD+ T T I+ +
Sbjct: 486 KMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMED 545
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
+C + T + + + D ++ L +++ A +F ++++
Sbjct: 546 AFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP 605
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
D VTY +I G C + + A ++ ++ P+ TI+IH CK+ + A ++
Sbjct: 606 DIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF 665
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
S M + P+ TY L+ F ++ + KL +EM K I P +++I++D L K
Sbjct: 666 SIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR 725
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
G V EA + + + PD++ Y L+ GYC V + +A ++ M + G+ P+
Sbjct: 726 GRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 108/226 (47%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
+ +F+ + R + I N ++ L K A + L + PDI T +I
Sbjct: 556 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 615
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
YC+ ++ A + + + P+T+T T L+ LC N + A++ + +G +
Sbjct: 616 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP 675
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
+ VTY L++ K + +L ++Q + + P + Y+III CK V +A N++
Sbjct: 676 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 735
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
+ + ++LPDV Y LI G+C V +L EA L + M+ + PD
Sbjct: 736 HQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+DA FN L+ P I+ +N ++ ++ A + L T P+ TLTIL
Sbjct: 589 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 648
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ C + A + + + ++G +P+ +T+ LM + ++ + + + + +G
Sbjct: 649 IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 708
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
V+Y I+I+GLCK G+ A + Q + PDV Y I+I +CK + +A
Sbjct: 709 SPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAAL 768
Query: 199 LYSEMLARRVLPDVFTYNAL 218
LY ML V PD AL
Sbjct: 769 LYEHMLRNGVKPDDLLQRAL 788
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 126/276 (45%), Gaps = 6/276 (2%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKIL-TSLVK---MKHYPTAISLS--HQLDFTGISPDI 72
D+A+ +F + P + F ++ S+++ KH I L + IS DI
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADI 572
Query: 73 FTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDH 132
++I+ +I A +++ PD +T+ T++ G C ++ A + +
Sbjct: 573 AVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFEL 632
Query: 133 VVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKL 192
+ F + VT ILI+ LCK A+++ + + KP+ Y ++ F K
Sbjct: 633 LKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVD 692
Query: 193 VSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNI 252
+ ++ L+ EM + + P + +Y+ +I G C ++ EAT + + + + PD + I
Sbjct: 693 IEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAI 752
Query: 253 LVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSL 288
L+ K G + EA + M++ GVKPD + +L
Sbjct: 753 LIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 2/164 (1%)
Query: 14 SIRNADDAVSIFNRLLRMSP-TPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDI 72
S+R D+A IF LL+++P P + ++ L K AI + + G P+
Sbjct: 619 SLRRLDEAERIF-ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 677
Query: 73 FTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDH 132
T L++ + I +F + ++ ++G P ++++ ++ GLC G+V A
Sbjct: 678 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 737
Query: 133 VVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPD 176
+ D V Y ILI G CK+G+ A L + VKPD
Sbjct: 738 AIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 194 bits (494), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 185/340 (54%), Gaps = 7/340 (2%)
Query: 34 TPPIIEFNKILTSLVKM----KHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQIT 89
+P ++ +N ++ K+ K Y L ++ +SP++ T ILI+ + +
Sbjct: 255 SPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVE-NDVSPNLTTFNILIDGFWKDDNLP 313
Query: 90 SAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILI 149
+ V ++L + +P+ I++ +L+ GLC G++ A+ D +V+ G + + +TY LI
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Query: 150 NGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVL 209
NG CK + AL + ++GQ P MY ++I ++CK + D + L EM ++
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 210 PDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTV 269
PDV TYN LI G C ++ A KL D++ +K + PD TF+IL++ ++G ++A +
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAML 492
Query: 270 LAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMP-QRGIAPNVHSYSIMINGLC 328
L M K G+KP +TYN +M GYC + A ++ M +R + NV SY++++ G
Sbjct: 493 LKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYS 552
Query: 329 KTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRV 368
+ K+++A LL EM K ++P+ +TY + + + G V
Sbjct: 553 QKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFV 592
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 162/307 (52%), Gaps = 4/307 (1%)
Query: 68 ISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCL---NGQVQ 124
I P++FT ++IN C ++ A V+ + G P+ +++ TL+ G C NG++
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 125 TALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIII 184
A +V + T+ ILI+G K ++++ +++ Q VKP+V Y +I
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 185 HSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIH 244
+ C +S+A ++ +M++ V P++ TYNALI GFC LKEA + + +
Sbjct: 339 NGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV 398
Query: 245 PDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDI 304
P +N+L+DA K G + + + M ++G+ PD+ TYN L+ G C + AK +
Sbjct: 399 PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKL 458
Query: 305 FNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCK 364
F+ + +G+ P++ ++ I++ G C+ + +A LL EM + P +TY+ ++ G CK
Sbjct: 459 FDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCK 517
Query: 365 SGRVSHA 371
G + A
Sbjct: 518 EGNLKAA 524
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 166/326 (50%), Gaps = 8/326 (2%)
Query: 56 AISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMK 115
AIS+ + I D+ L Y N ++ F + GY+ ++ LM
Sbjct: 142 AISMCDNVCVNSIIADMLVLA-----YANNSRFELGFEAFKRSGYYGYKLSALSCKPLMI 196
Query: 116 GLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKP 175
L + + ++ + + + T+ ++IN LCK G+ A +M ++ P
Sbjct: 197 ALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSP 256
Query: 176 DVEMYTIIIHSFCK---DKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEAT 232
+V Y +I +CK + + A + EM+ V P++ T+N LI GF L +
Sbjct: 257 NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSM 316
Query: 233 KLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGY 292
K+ EM+ +++ P+ ++N L++ L G + EA ++ M+ GV+P++ITYN+L++G+
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376
Query: 293 CLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDT 352
C + +A D+F S+ +G P Y+++I+ CK K+D+ L EM+ + I+PD
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436
Query: 353 VTYSSLIDGLCKSGRVSHAWELVDDV 378
TY+ LI GLC++G + A +L D +
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQL 462
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 154/288 (53%), Gaps = 4/288 (1%)
Query: 94 VLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLC 153
V ++++R +P+ TF ++ LC G++ A + + G + V+Y LI+G C
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 154 KMG---QTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLP 210
K+G + A +++++ V P++ + I+I F KD + + ++ EML + V P
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 211 DVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVL 270
+V +YN+LI G C ++ EA + D+MV+ + P+ T+N L++ K +KEA +
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Query: 271 AVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKT 330
+ QG P YN L+D YC + +++ + M + GI P+V +Y+ +I GLC+
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449
Query: 331 KKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
++ A L ++ K + PD VT+ L++G C+ G A L+ ++
Sbjct: 450 GNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEM 496
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 161/318 (50%), Gaps = 7/318 (2%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A ++ ++ +P + FN ++ K + P ++ + ++ + P++ + LIN
Sbjct: 280 ADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLIN 339
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
CN +I+ A S+ K++ G +P+ IT+ L+ G C N ++ AL V QG
Sbjct: 340 GLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVP 399
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
Y +LI+ CK+G+ L +++ + + PDV Y +I C++ + A L+
Sbjct: 400 TTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLF 459
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
+ L + LPD+ T++ L+ G+C + ++A LL EM + P T+NI++ KE
Sbjct: 460 DQ-LTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKE 518
Query: 261 GNVKEAKTVLAVMMKQ-GVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
GN+K A + M K+ ++ ++ +YN L+ GY ++ A + N M ++G+ PN +
Sbjct: 519 GNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578
Query: 320 YSIMINGLCKTKKVDEAL 337
Y I+ K + VD+
Sbjct: 579 YEIV-----KEEMVDQGF 591
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 136/264 (51%), Gaps = 18/264 (6%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A+S+ ++++ P +I +N ++ K A+ + + G P +LI
Sbjct: 349 EAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLI 408
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ YC +I F++ ++ + G PD T+ L+ GLC NG ++ A + D + ++G
Sbjct: 409 DAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP 468
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
D VT+ IL+ G C+ G++R A L++++ +KP Y I++ +CK+ + A N+
Sbjct: 469 -DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNM 527
Query: 200 YSEM-LARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
++M RR+ +V +YN L+ G+ +L++A LL+EM+ K + P+ T+ I
Sbjct: 528 RTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEI------ 581
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDI 282
VKE M+ QG PDI
Sbjct: 582 ----VKEE------MVDQGFVPDI 595
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 94/146 (64%), Gaps = 3/146 (2%)
Query: 237 EMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVS 296
EM+ + I P+ +TFN++++AL K G + +A+ V+ M G P++++YN+L+DGYC +
Sbjct: 213 EMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLG 272
Query: 297 ---EVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTV 353
++ KA + M + ++PN+ +++I+I+G K + ++ + EM +++ P+ +
Sbjct: 273 GNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVI 332
Query: 354 TYSSLIDGLCKSGRVSHAWELVDDVI 379
+Y+SLI+GLC G++S A + D ++
Sbjct: 333 SYNSLINGLCNGGKISEAISMRDKMV 358
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 180/359 (50%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A+ +L + +P +++ L K + A+ L Q G D T L
Sbjct: 452 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
++ C ++ AF + +IL RG D +++ TL+ G C ++ A F D +V +G
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ D TY ILI GL M + A+Q + + PDV Y+++I CK + +
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
+ EM+++ V P+ YN LI +C +L A +L ++M K I P++ T+ L+ +
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
V+EAK + M +G++P++ Y +L+DGY + ++ K + + M + + PN
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDD 377
+Y++MI G + V EA LL EM K I+PD++TY I G K G V A++ D+
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 184/361 (50%)
Query: 18 ADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTI 77
AD+A + +L + F ++ L + +A+ ++ +SP LT
Sbjct: 416 ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT 475
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
LI+ C + + A + + L +G+ DT T L+ GLC G++ A + ++ +G
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
+D+V+Y LI+G C + A + ++ + +KPD Y+I+I V +A
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 595
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
+ + +LPDV+TY+ +I G C + +E + DEM++KN+ P+ +N L+ A
Sbjct: 596 QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 655
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
+ G + A + M +G+ P+ TY SL+ G ++S V +AK +F M G+ PNV
Sbjct: 656 CRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNV 715
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDD 377
Y+ +I+G K ++ + LL EM KN+ P+ +TY+ +I G + G V+ A L+++
Sbjct: 716 FHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNE 775
Query: 378 V 378
+
Sbjct: 776 M 776
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 196/395 (49%), Gaps = 35/395 (8%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++AV +F+++ P ++ FN ++ L Y A ++ G+ P + T +IL
Sbjct: 277 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 336
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTI------------------------------ 108
+ +I A+ VL ++ K+G+ P+ I
Sbjct: 337 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 396
Query: 109 -----TFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQ 163
T+ TL+KG C NGQ A + +++ GF ++Q ++ +I LC +AL+
Sbjct: 397 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 456
Query: 164 LMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFC 223
+ ++ + + P + T +I CK S A L+ + L + + D T NAL++G C
Sbjct: 457 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC 516
Query: 224 IVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDII 283
+L EA ++ E++ + D ++N L+ + + EA L M+K+G+KPD
Sbjct: 517 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNY 576
Query: 284 TYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM 343
TY+ L+ G +++V +A ++ + G+ P+V++YS+MI+G CK ++ +E EM
Sbjct: 577 TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 636
Query: 344 DCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
KN+ P+TV Y+ LI C+SGR+S A EL +D+
Sbjct: 637 MSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 182/384 (47%), Gaps = 35/384 (9%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
DA + + + P +I +N ++ S ++ AI + + G+S T LI
Sbjct: 348 DAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 407
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFT---------------------------- 111
YC Q +A +L ++L G+ + +FT
Sbjct: 408 KGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMS 467
Query: 112 -------TLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQL 164
TL+ GLC +G+ AL+ + +GF +D T L++GLC+ G+ A ++
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 165 MRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCI 224
++I G+ D Y +I C K + +A+ EM+ R + PD +TY+ LI G
Sbjct: 528 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587
Query: 225 VSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIIT 284
+++++EA + D+ + PD YT+++++D K +E + MM + V+P+ +
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 647
Query: 285 YNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMD 344
YN L+ YC ++ A ++ M +GI+PN +Y+ +I G+ +V+EA L EM
Sbjct: 648 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707
Query: 345 CKNIIPDTVTYSSLIDGLCKSGRV 368
+ + P+ Y++LIDG K G++
Sbjct: 708 MEGLEPNVFHYTALIDGYGKLGQM 731
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 178/392 (45%), Gaps = 36/392 (9%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A+ +F L P N +LTSLV+ + + + G+SPD++ T IN
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAIN 268
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
+C ++ A + +K+ + G P+ +TF T++ GL + G+ A F + +V +G
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
+TY IL+ GL + + A +++++ + P+V +Y +I SF + ++ A +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVT-------------------- 240
M+++ + TYN LI G+C Q A +LL EM++
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448
Query: 241 ---------------KNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITY 285
+N+ P L+ L K G +A + + +G D T
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508
Query: 286 NSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDC 345
N+L+ G C ++++A I + RG + SY+ +I+G C KK+DEA L EM
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 346 KNIIPDTVTYSSLIDGLCKSGRVSHAWELVDD 377
+ + PD TYS LI GL +V A + DD
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDD 600
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 174/409 (42%), Gaps = 79/409 (19%)
Query: 38 IEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYC-------NQAQITS 90
+EF+++ + + ++ LDF ++ D F+ + + YC + +++
Sbjct: 91 LEFDRLFP------EFRSKVNPKTALDFFRLASDSFSFSFSLRSYCLLIGLLLDANLLSA 144
Query: 91 AFSVLAK-------ILKRGYRPDTITFTTLMK--GLCLNGQVQT---------------- 125
A VL + +L G R + M LC + +++
Sbjct: 145 ARVVLIRLINGNVPVLPCGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKR 204
Query: 126 -----ALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMY 180
AL + +G + T IL+ L + + + + + + V PDV ++
Sbjct: 205 DGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLF 263
Query: 181 TIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVT 240
T I++FCK V +A L+S+M V P+V T+N +I G + + EA ++MV
Sbjct: 264 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE 323
Query: 241 KNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNK 300
+ + P T++ILV L + + +A VL M K+G P++I YN+L+D + +NK
Sbjct: 324 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 383
Query: 301 AKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKV--------------------------- 333
A +I + M +G++ +Y+ +I G CK +
Sbjct: 384 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 443
Query: 334 --------DEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
D AL + EM +N+ P ++LI GLCK G+ S A EL
Sbjct: 444 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 121/251 (48%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
+ D+A + +++ P ++ ++ L M AI G+ PD++T
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
+++I+ C + +++ + +P+T+ + L++ C +G++ AL+ + +
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
+G + TY LI G+ + + A L +++ + ++P+V YT +I + K +
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 733
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
L EM ++ V P+ TY +I G+ + EA++LL+EM K I PD+ T+ +
Sbjct: 734 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIY 793
Query: 256 ALGKEGNVKEA 266
K+G V EA
Sbjct: 794 GYLKQGGVLEA 804
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 101/184 (54%), Gaps = 1/184 (0%)
Query: 202 EMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEG 261
+++ + V PDV+ + I FC +++EA KL +M + P+ TFN ++D LG G
Sbjct: 250 DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 309
Query: 262 NVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYS 321
EA M+++G++P +ITY+ L+ G + A + M ++G PNV Y+
Sbjct: 310 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 369
Query: 322 IMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVIFI 381
+I+ + +++A+ + M K + + TY++LI G CK+G+ +A L+ +++ I
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
Query: 382 -FNV 384
FNV
Sbjct: 430 GFNV 433
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 107/224 (47%)
Query: 14 SIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIF 73
++ ++A+ ++ R P + ++ ++ K + ++ + P+
Sbjct: 587 NMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTV 646
Query: 74 TLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHV 133
LI YC +++ A + + +G P++ T+T+L+KG+ + +V+ A + +
Sbjct: 647 VYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM 706
Query: 134 VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLV 193
+G + Y LI+G K+GQ L+R++ + V P+ YT++I + +D V
Sbjct: 707 RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDE 237
++A L +EM + ++PD TY IYG+ + EA K DE
Sbjct: 767 TEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 180/359 (50%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A+ +L + +P +++ L K + A+ L Q G D T L
Sbjct: 452 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
++ C ++ AF + +IL RG D +++ TL+ G C ++ A F D +V +G
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ D TY ILI GL M + A+Q + + PDV Y+++I CK + +
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
+ EM+++ V P+ YN LI +C +L A +L ++M K I P++ T+ L+ +
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
V+EAK + M +G++P++ Y +L+DGY + ++ K + + M + + PN
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDD 377
+Y++MI G + V EA LL EM K I+PD++TY I G K G V A++ D+
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 184/361 (50%)
Query: 18 ADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTI 77
AD+A + +L + F ++ L + +A+ ++ +SP LT
Sbjct: 416 ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT 475
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
LI+ C + + A + + L +G+ DT T L+ GLC G++ A + ++ +G
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
+D+V+Y LI+G C + A + ++ + +KPD Y+I+I V +A
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 595
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
+ + +LPDV+TY+ +I G C + +E + DEM++KN+ P+ +N L+ A
Sbjct: 596 QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 655
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
+ G + A + M +G+ P+ TY SL+ G ++S V +AK +F M G+ PNV
Sbjct: 656 CRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNV 715
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDD 377
Y+ +I+G K ++ + LL EM KN+ P+ +TY+ +I G + G V+ A L+++
Sbjct: 716 FHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNE 775
Query: 378 V 378
+
Sbjct: 776 M 776
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 196/395 (49%), Gaps = 35/395 (8%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++AV +F+++ P ++ FN ++ L Y A ++ G+ P + T +IL
Sbjct: 277 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 336
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTI------------------------------ 108
+ +I A+ VL ++ K+G+ P+ I
Sbjct: 337 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 396
Query: 109 -----TFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQ 163
T+ TL+KG C NGQ A + +++ GF ++Q ++ +I LC +AL+
Sbjct: 397 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 456
Query: 164 LMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFC 223
+ ++ + + P + T +I CK S A L+ + L + + D T NAL++G C
Sbjct: 457 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC 516
Query: 224 IVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDII 283
+L EA ++ E++ + D ++N L+ + + EA L M+K+G+KPD
Sbjct: 517 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNY 576
Query: 284 TYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM 343
TY+ L+ G +++V +A ++ + G+ P+V++YS+MI+G CK ++ +E EM
Sbjct: 577 TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 636
Query: 344 DCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
KN+ P+TV Y+ LI C+SGR+S A EL +D+
Sbjct: 637 MSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 182/384 (47%), Gaps = 35/384 (9%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
DA + + + P +I +N ++ S ++ AI + + G+S T LI
Sbjct: 348 DAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 407
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFT---------------------------- 111
YC Q +A +L ++L G+ + +FT
Sbjct: 408 KGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMS 467
Query: 112 -------TLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQL 164
TL+ GLC +G+ AL+ + +GF +D T L++GLC+ G+ A ++
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 165 MRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCI 224
++I G+ D Y +I C K + +A+ EM+ R + PD +TY+ LI G
Sbjct: 528 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587
Query: 225 VSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIIT 284
+++++EA + D+ + PD YT+++++D K +E + MM + V+P+ +
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 647
Query: 285 YNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMD 344
YN L+ YC ++ A ++ M +GI+PN +Y+ +I G+ +V+EA L EM
Sbjct: 648 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707
Query: 345 CKNIIPDTVTYSSLIDGLCKSGRV 368
+ + P+ Y++LIDG K G++
Sbjct: 708 MEGLEPNVFHYTALIDGYGKLGQM 731
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 178/392 (45%), Gaps = 36/392 (9%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A+ +F L P N +LTSLV+ + + + G+SPD++ T IN
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAIN 268
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
+C ++ A + +K+ + G P+ +TF T++ GL + G+ A F + +V +G
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
+TY IL+ GL + + A +++++ + P+V +Y +I SF + ++ A +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVT-------------------- 240
M+++ + TYN LI G+C Q A +LL EM++
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448
Query: 241 ---------------KNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITY 285
+N+ P L+ L K G +A + + +G D T
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508
Query: 286 NSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDC 345
N+L+ G C ++++A I + RG + SY+ +I+G C KK+DEA L EM
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 346 KNIIPDTVTYSSLIDGLCKSGRVSHAWELVDD 377
+ + PD TYS LI GL +V A + DD
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDD 600
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 174/409 (42%), Gaps = 79/409 (19%)
Query: 38 IEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYC-------NQAQITS 90
+EF+++ + + ++ LDF ++ D F+ + + YC + +++
Sbjct: 91 LEFDRLFP------EFRSKVNPKTALDFFRLASDSFSFSFSLRSYCLLIGLLLDANLLSA 144
Query: 91 AFSVLAK-------ILKRGYRPDTITFTTLMK--GLCLNGQVQT---------------- 125
A VL + +L G R + M LC + +++
Sbjct: 145 ARVVLIRLINGNVPVLPCGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKR 204
Query: 126 -----ALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMY 180
AL + +G + T IL+ L + + + + + + V PDV ++
Sbjct: 205 DGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLF 263
Query: 181 TIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVT 240
T I++FCK V +A L+S+M V P+V T+N +I G + + EA ++MV
Sbjct: 264 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE 323
Query: 241 KNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNK 300
+ + P T++ILV L + + +A VL M K+G P++I YN+L+D + +NK
Sbjct: 324 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 383
Query: 301 AKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKV--------------------------- 333
A +I + M +G++ +Y+ +I G CK +
Sbjct: 384 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 443
Query: 334 --------DEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
D AL + EM +N+ P ++LI GLCK G+ S A EL
Sbjct: 444 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 121/251 (48%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
+ D+A + +++ P ++ ++ L M AI G+ PD++T
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
+++I+ C + +++ + +P+T+ + L++ C +G++ AL+ + +
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
+G + TY LI G+ + + A L +++ + ++P+V YT +I + K +
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 733
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
L EM ++ V P+ TY +I G+ + EA++LL+EM K I PD+ T+ +
Sbjct: 734 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIY 793
Query: 256 ALGKEGNVKEA 266
K+G V EA
Sbjct: 794 GYLKQGGVLEA 804
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 101/184 (54%), Gaps = 1/184 (0%)
Query: 202 EMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEG 261
+++ + V PDV+ + I FC +++EA KL +M + P+ TFN ++D LG G
Sbjct: 250 DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 309
Query: 262 NVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYS 321
EA M+++G++P +ITY+ L+ G + A + M ++G PNV Y+
Sbjct: 310 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 369
Query: 322 IMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVIFI 381
+I+ + +++A+ + M K + + TY++LI G CK+G+ +A L+ +++ I
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
Query: 382 -FNV 384
FNV
Sbjct: 430 GFNV 433
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 107/224 (47%)
Query: 14 SIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIF 73
++ ++A+ ++ R P + ++ ++ K + ++ + P+
Sbjct: 587 NMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTV 646
Query: 74 TLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHV 133
LI YC +++ A + + +G P++ T+T+L+KG+ + +V+ A + +
Sbjct: 647 VYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM 706
Query: 134 VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLV 193
+G + Y LI+G K+GQ L+R++ + V P+ YT++I + +D V
Sbjct: 707 RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDE 237
++A L +EM + ++PD TY IYG+ + EA K DE
Sbjct: 767 TEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 194/358 (54%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A+ +FN ++ + P + + ++ SL ++K A + ++ TG +I +LI+
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
C + ++ A + + + +PD +T+ TL+ GLC + + L+ D ++ F
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
+ L+ GL K G+ AL L++++ V P++ +Y +I S CK + +A L+
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
M + P+ TY+ LI FC +L A L EMV + Y +N L++ K
Sbjct: 391 DRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKF 450
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSY 320
G++ A+ +A M+ + ++P ++TY SLM GYC ++NKA +++ M +GIAP+++++
Sbjct: 451 GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF 510
Query: 321 SIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+ +++GL + + +A+ L EM N+ P+ VTY+ +I+G C+ G +S A+E + ++
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 176/333 (52%), Gaps = 2/333 (0%)
Query: 29 LRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQI 88
LR SP+ + + ++ L K A++L ++ G+SP++F LI+ C +
Sbjct: 326 LRFSPSEAAV--SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKF 383
Query: 89 TSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRIL 148
A + ++ K G RP+ +T++ L+ C G++ TAL F +V G +L Y L
Sbjct: 384 HEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSL 443
Query: 149 INGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRV 208
ING CK G AA M ++ + ++P V YT ++ +C ++ A LY EM + +
Sbjct: 444 INGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Query: 209 LPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKT 268
P ++T+ L+ G +++A KL +EM N+ P+ T+N++++ +EG++ +A
Sbjct: 504 APSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFE 563
Query: 269 VLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLC 328
L M ++G+ PD +Y L+ G CL + ++AK + + + N Y+ +++G C
Sbjct: 564 FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFC 623
Query: 329 KTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDG 361
+ K++EAL++ EM + + D V Y LIDG
Sbjct: 624 REGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656
Score = 184 bits (468), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 184/361 (50%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++A+++ R++ +P + +N ++ SL K + + A L ++ G+ P+ T +IL
Sbjct: 349 EEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSIL 408
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ +C + ++ +A S L +++ G + + +L+ G C G + A F ++ +
Sbjct: 409 IDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKL 468
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
VTY L+ G C G+ AL+L ++ G+ + P + +T ++ + L+ DA
Sbjct: 469 EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVK 528
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L++EM V P+ TYN +I G+C + +A + L EM K I PD Y++ L+ L
Sbjct: 529 LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC 588
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
G EAK + + K + + I Y L+ G+C ++ +A + M QRG+ ++
Sbjct: 589 LTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV 648
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
Y ++I+G K K LL EM + + PD V Y+S+ID K+G A+ + D +
Sbjct: 649 CYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM 708
Query: 379 I 379
I
Sbjct: 709 I 709
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 189/360 (52%), Gaps = 8/360 (2%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
R +A +F+R+ ++ P + ++ ++ + TA+S ++ TG+ ++
Sbjct: 381 RKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPY 440
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
LIN +C I++A +A+++ + P +T+T+LM G C G++ AL+ + +
Sbjct: 441 NSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 500
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
+G T+ L++GL + G R A++L ++ VKP+ Y ++I +C++ +S
Sbjct: 501 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSK 560
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
A+ EM + ++PD ++Y LI+G C+ Q EA +D + N + + L+
Sbjct: 561 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH 620
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIF----NSMPQR 311
+EG ++EA +V M+++GV D++ Y L+DG S +K + +F M R
Sbjct: 621 GFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG----SLKHKDRKLFFGLLKEMHDR 676
Query: 312 GIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
G+ P+ Y+ MI+ KT EA + M + +P+ VTY+++I+GLCK+G V+ A
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 182/360 (50%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+AV I L P ++ + ++ L K++ + + + ++ SP ++ L+
Sbjct: 280 EAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLV 339
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ +I A +++ +++ G P+ + L+ LC + A D + G R
Sbjct: 340 EGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLR 399
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
+ VTY ILI+ C+ G+ AL + ++ +K V Y +I+ CK +S A
Sbjct: 400 PNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGF 459
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+EM+ +++ P V TY +L+ G+C ++ +A +L EM K I P YTF L+ L +
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFR 519
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
G +++A + M + VKP+ +TYN +++GYC +++KA + M ++GI P+ +S
Sbjct: 520 AGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYS 579
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
Y +I+GLC T + EA + + N + + Y+ L+ G C+ G++ A + +++
Sbjct: 580 YRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMV 639
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 188/397 (47%), Gaps = 37/397 (9%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+ A+ +++ + P I F +L+ L + A+ L +++ + P+ T ++
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I YC + ++ AF L ++ ++G PDT ++ L+ GLCL GQ A F D +
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608
Query: 139 RLDQVTYRILINGLCKMGQTRAALQ----------------------------------- 163
L+++ Y L++G C+ G+ AL
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFG 668
Query: 164 LMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFC 223
L++++ + +KPD +YT +I + K +A+ ++ M+ +P+ TY A+I G C
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728
Query: 224 IVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTV-LAVMMKQGVKPDI 282
+ EA L +M + P+ T+ +D L K G V K V L + +G+ +
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILKGLLANT 787
Query: 283 ITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAE 342
TYN L+ G+C + +A ++ M G++P+ +Y+ MIN LC+ V +A+ L
Sbjct: 788 ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNS 847
Query: 343 MDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
M K I PD V Y++LI G C +G + A EL ++++
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEML 884
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 146/275 (53%)
Query: 105 PDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQL 164
P+ T + L+ GL A++ + +V+ G R D Y +I LC++ A ++
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 165 MRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCI 224
+ ++ ++ Y ++I CK + V +A + ++ + + PDV TY L+YG C
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 225 VSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIIT 284
V + + +++DEM+ P + LV+ L K G ++EA ++ ++ GV P++
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 285 YNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMD 344
YN+L+D C + ++A+ +F+ M + G+ PN +YSI+I+ C+ K+D AL+ L EM
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 345 CKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+ Y+SLI+G CK G +S A + ++I
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMI 464
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 160/367 (43%), Gaps = 70/367 (19%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
DAV +FN + + P + +N ++ + A ++ GI PD ++ LI
Sbjct: 525 DAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ C Q + A + + K + I +T L+ G C G+++ AL +V +G
Sbjct: 585 HGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVD 644
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYT------------------ 181
LD V Y +LI+G K + L++++ + +KPD +YT
Sbjct: 645 LDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI 704
Query: 182 -----------------IIIHSFCKDKLVSDAYNLYSEM--------------------- 203
+I+ CK V++A L S+M
Sbjct: 705 WDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK 764
Query: 204 --------------LARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYT 249
+ + +L + TYN LI GFC +++EA++L+ M+ + PD T
Sbjct: 765 GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCIT 824
Query: 250 FNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMP 309
+ +++ L + +VK+A + M ++G++PD + YN+L+ G C+ E+ KA ++ N M
Sbjct: 825 YTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEML 884
Query: 310 QRGIAPN 316
++G+ PN
Sbjct: 885 RQGLIPN 891
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 119/267 (44%), Gaps = 37/267 (13%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++A+S+ +++ ++ + ++ +K K L ++ G+ PD T +
Sbjct: 629 EEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSM 688
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQV--------------- 123
I+ AF + ++ G P+ +T+T ++ GLC G V
Sbjct: 689 IDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSS 748
Query: 124 ---------------------QTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAAL 162
Q A++ H+ ++ +G + TY +LI G C+ G+ A
Sbjct: 749 VPNQVTYGCFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEAS 807
Query: 163 QLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGF 222
+L+ ++ G V PD YT +I+ C+ V A L++ M + + PD YN LI+G
Sbjct: 808 ELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGC 867
Query: 223 CIVSQLKEATKLLDEMVTKNIHPDAYT 249
C+ ++ +AT+L +EM+ + + P+ T
Sbjct: 868 CVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
+N ++ + A L ++ G+SPD T T +IN C + + A + +
Sbjct: 790 YNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMT 849
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYR 146
++G RPD + + TL+ G C+ G++ A + + ++ QG + T R
Sbjct: 850 EKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSR 896
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 198/434 (45%), Gaps = 62/434 (14%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A +++N +L+ + +P + F ++ L K A + + GISP+ T TILI+
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
C + A + ++ G PD++ L+ G C G++ A + GF L
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVL 301
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
Y LI+GL + + A +L + + +KPD+ +YTI+I K + DA L
Sbjct: 302 GLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLL 361
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
S M ++ + PD + YNA+I C L+E L EM PDA T IL+ ++ +
Sbjct: 362 SSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRN 421
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM------------ 308
G V+EA+ + + K G P + T+N+L+DG C E+ +A+ + + M
Sbjct: 422 GLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRL 481
Query: 309 ---------------------------PQRGIAPNVHSYSIMINGLCKTKKVDEALNLLA 341
G +P++ SY+++ING C+ +D AL LL
Sbjct: 482 SHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLN 541
Query: 342 EMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV---DD--------------------V 378
+ K + PD+VTY++LI+GL + GR A++L DD V
Sbjct: 542 VLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSCRKRKV 601
Query: 379 IFIFNVWMSYAKAI 392
+ FN+WM Y K I
Sbjct: 602 LVAFNLWMKYLKKI 615
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 135/252 (53%), Gaps = 1/252 (0%)
Query: 128 QFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSF 187
Q + + + G +D + +LI+ KMG A++ +++ +PDV Y +I+
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVM 172
Query: 188 CKDKLVSD-AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
++++ A+ +Y+EML P+++T+ L+ G + +A K+ D+M + I P+
Sbjct: 173 MREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPN 232
Query: 247 AYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFN 306
T+ IL+ L + G+ +A+ + M G PD + +N+L+DG+C + + +A ++
Sbjct: 233 RVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLR 292
Query: 307 SMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
+ G + YS +I+GL + ++ +A L A M KNI PD + Y+ LI GL K+G
Sbjct: 293 LFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAG 352
Query: 367 RVSHAWELVDDV 378
++ A +L+ +
Sbjct: 353 KIEDALKLLSSM 364
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 159/363 (43%), Gaps = 13/363 (3%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
R A ++ +L+ + P II + ++ L K A+ L + GISPD +
Sbjct: 317 RRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCY 376
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
+I C + + S+ ++ + PD T T L+ +C NG V+ A + +
Sbjct: 377 NAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEK 436
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCK--DKLV 193
G T+ LI+GLCK G+ + A L+ +++ V ++ + HS + D +V
Sbjct: 437 SGCSPSVATFNALIDGLCKSGELKEARLLLHKME---VGRPASLFLRLSHSGNRSFDTMV 493
Query: 194 SD-----AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAY 248
AY + PD+ +YN LI GFC + A KLL+ + K + PD+
Sbjct: 494 ESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSV 553
Query: 249 TFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM 308
T+N L++ L + G +EA + K + Y SLM C +V A +++
Sbjct: 554 TYNTLINGLHRVGREEEAFKLFYA--KDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKY 611
Query: 309 PQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRV 368
++ I+ + I K + + AL L E+D + Y+ + GLC+SGR
Sbjct: 612 LKK-ISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRF 670
Query: 369 SHA 371
A
Sbjct: 671 HEA 673
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 112/222 (50%), Gaps = 9/222 (4%)
Query: 163 QLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGF 222
Q + +++ V D + ++I ++ K + A + M PDVFTYN ++
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILR-- 170
Query: 223 CIVSQLKE-----ATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQG 277
V +E A + +EM+ N P+ YTF IL+D L K+G +A+ + M +G
Sbjct: 171 --VMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRG 228
Query: 278 VKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEAL 337
+ P+ +TY L+ G C + A+ +F M G P+ +++ +++G CK ++ EA
Sbjct: 229 ISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAF 288
Query: 338 NLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
LL + + YSSLIDGL ++ R + A+EL +++
Sbjct: 289 ELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 101/197 (51%), Gaps = 1/197 (0%)
Query: 180 YTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMV 239
+ ++I +D + E+ + V D + + LI + + ++A + M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 240 TKNIHPDAYTFNILVDALGKEG-NVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEV 298
+ PD +T+N+++ + +E A V M+K P++ T+ LMDG
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 299 NKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSL 358
+ A+ +F+ M RGI+PN +Y+I+I+GLC+ D+A L EM PD+V +++L
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNAL 274
Query: 359 IDGLCKSGRVSHAWELV 375
+DG CK GR+ A+EL+
Sbjct: 275 LDGFCKLGRMVEAFELL 291
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 95/230 (41%), Gaps = 40/230 (17%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
F+ ++ S +K Y L+H D TG SPDI + +LIN +C I A +L +
Sbjct: 489 FDTMVESGSILKAYR---DLAHFAD-TGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQ 544
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLC------ 153
+G PD++T+ TL+ GL G+ + A + FR YR L+ C
Sbjct: 545 LKGLSPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRKRKVL 602
Query: 154 ----------------------------KMGQTRAALQLMRQIQGQLVKPDVEMYTIIIH 185
K G+T AL+ + ++ + + + YTI +
Sbjct: 603 VAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLI 662
Query: 186 SFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLL 235
C+ +A ++S + +++L + LI+G C QL A ++
Sbjct: 663 GLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVF 712
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 9/134 (6%)
Query: 250 FNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMP 309
F +++D L ++ L + GV D + L+ Y + KA + F M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 310 QRGIAPNVHSYSIMINGLCKTKKVDEALNLLA-----EMDCKNIIPDTVTYSSLIDGLCK 364
+ P+V +Y++++ + + +E +LA EM N P+ T+ L+DGL K
Sbjct: 155 EFDCRPDVFTYNVILRVMMR----EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYK 210
Query: 365 SGRVSHAWELVDDV 378
GR S A ++ DD+
Sbjct: 211 KGRTSDAQKMFDDM 224
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 191 bits (485), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 187/360 (51%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++A+ F+++ R P N +L K+ + G P +FT I+
Sbjct: 209 EEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIM 268
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+C C + + +A + ++ RG PDT+T+ +++ G G++ + F + +
Sbjct: 269 IDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCC 328
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D +TY LIN CK G+ L+ R+++G +KP+V Y+ ++ +FCK+ ++ A
Sbjct: 329 EPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK 388
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
Y +M ++P+ +TY +LI C + L +A +L +EM+ + + T+ L+D L
Sbjct: 389 FYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC 448
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
+KEA+ + M GV P++ +YN+L+ G+ +++A ++ N + RGI P++
Sbjct: 449 DAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLL 508
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
Y I GLC +K++ A ++ EM I +++ Y++L+D KSG + L+D++
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 179/359 (49%), Gaps = 1/359 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
DD V F + M P +I +N ++ K P + ++ G+ P++ + + L
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
++ +C + + A + + G P+ T+T+L+ C G + A + + ++ G
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ VTY LI+GLC + + A +L ++ V P++ Y +IH F K K + A
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L +E+ R + PD+ Y I+G C + +++ A +++EM I ++ + L+DA
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQR-GIAPNV 317
K GN E +L M + ++ ++T+ L+DG C V+KA D FN + G+ N
Sbjct: 554 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 613
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
++ MI+GLCK +V+ A L +M K ++PD Y+SL+DG K G V A L D
Sbjct: 614 AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRD 672
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 166/337 (49%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P F+ + + L+ + AI ++ + P + L++ + +
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 95 LAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCK 154
++ G RP T+ ++ +C G V+ A + + +G D VTY +I+G K
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 155 MGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFT 214
+G+ + +++ +PDV Y +I+ FCK + Y EM + P+V +
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 215 YNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMM 274
Y+ L+ FC +++A K +M + P+ YT+ L+DA K GN+ +A + M+
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 275 KQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVD 334
+ GV+ +++TY +L+DG C + +A+++F M G+ PN+ SY+ +I+G K K +D
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 335 EALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
AL LL E+ + I PD + Y + I GLC ++ A
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 526
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 150/309 (48%)
Query: 70 PDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQF 129
P L + + + A +K+ + P T + L+ G+ +F
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 130 HDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCK 189
++ G R TY I+I+ +CK G AA L +++ + + PD Y +I F K
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 190 DKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYT 249
+ D + EM PDV TYNALI FC +L + EM + P+ +
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 250 FNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMP 309
++ LVDA KEG +++A M + G+ P+ TY SL+D C + ++ A + N M
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 310 QRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVS 369
Q G+ NV +Y+ +I+GLC +++ EA L +MD +IP+ +Y++LI G K+ +
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 370 HAWELVDDV 378
A EL++++
Sbjct: 490 RALELLNEL 498
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 125/254 (49%), Gaps = 4/254 (1%)
Query: 132 HVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDK 191
+V GF + + +LI+ +G A+Q +++ V P ++H F K
Sbjct: 186 NVCVPGFGVFDALFSVLID----LGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLG 241
Query: 192 LVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFN 251
D + +M+ P VFTYN +I C ++ A L +EM + + PD T+N
Sbjct: 242 KTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYN 301
Query: 252 ILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQR 311
++D GK G + + M +PD+ITYN+L++ +C ++ + + M
Sbjct: 302 SMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGN 361
Query: 312 GIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
G+ PNV SYS +++ CK + +A+ +M ++P+ TY+SLID CK G +S A
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 421
Query: 372 WELVDDVIFIFNVW 385
+ L ++++ + W
Sbjct: 422 FRLGNEMLQVGVEW 435
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 150/305 (49%), Gaps = 5/305 (1%)
Query: 15 IRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFT 74
I N DA + N +L++ ++ + ++ L + A L ++D G+ P++ +
Sbjct: 415 IGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS 474
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
LI+ + + A +L ++ RG +PD + + T + GLC +++ A + +
Sbjct: 475 YNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMK 534
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
G + + + Y L++ K G L L+ +++ ++ V + ++I CK+KLVS
Sbjct: 535 ECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVS 594
Query: 195 ---DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFN 251
D +N S + +FT A+I G C +Q++ AT L ++MV K + PD +
Sbjct: 595 KAVDYFNRISNDFGLQANAAIFT--AMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYT 652
Query: 252 ILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQR 311
L+D K+GNV EA + M + G+K D++ Y SL+ G +++ KA+ M
Sbjct: 653 SLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGE 712
Query: 312 GIAPN 316
GI P+
Sbjct: 713 GIHPD 717
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 106/248 (42%), Gaps = 50/248 (20%)
Query: 174 KPDVEMYTIIIHS-FCK----------------------------------------DKL 192
K VE Y I+ H FC D L
Sbjct: 139 KHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDAL 198
Query: 193 VS---------DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNI 243
S +A +S+M RV P + N L++ F + + + + +M+
Sbjct: 199 FSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGA 258
Query: 244 HPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKD 303
P +T+NI++D + KEG+V+ A+ + M +G+ PD +TYNS++DG+ V ++
Sbjct: 259 RPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVC 318
Query: 304 IFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLC 363
F M P+V +Y+ +IN CK K+ L EM + P+ V+YS+L+D C
Sbjct: 319 FFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFC 378
Query: 364 KSGRVSHA 371
K G + A
Sbjct: 379 KEGMMQQA 386
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 91/195 (46%), Gaps = 3/195 (1%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQL--DFTGISPDIFT 74
N + + + + + + ++ F ++ L K K A+ +++ DF G+ +
Sbjct: 557 NPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF-GLQANAAI 615
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
T +I+ C Q+ +A ++ +++++G PD +T+LM G G V AL D +
Sbjct: 616 FTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMA 675
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
G +LD + Y L+ GL Q + A + ++ G+ + PD + ++ + +
Sbjct: 676 EIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCID 735
Query: 195 DAYNLYSEMLARRVL 209
+A L S ++ ++L
Sbjct: 736 EAVELQSYLMKHQLL 750
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 185/363 (50%), Gaps = 4/363 (1%)
Query: 13 PSIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDI 72
P ++NA VS+F + + S + N ++ LV+ +++ A S ++ T +
Sbjct: 52 PQLKNA---VSVFQQAVD-SGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINF 107
Query: 73 FTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDH 132
+L+ L+ CY + AF VLA +LKRG+ + L+KGLC N + A+
Sbjct: 108 VSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLRE 167
Query: 133 VVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKL 192
+ D +Y +I G C+ + AL+L +++G + + I+I +FCK
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227
Query: 193 VSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNI 252
+ +A EM + D+ Y +LI GFC +L L DE++ + P A T+N
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287
Query: 253 LVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG 312
L+ K G +KEA + M+++GV+P++ TY L+DG C V + +A + N M ++
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 313 IAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAW 372
PN +Y+I+IN LCK V +A+ ++ M + PD +TY+ L+ GLC G + A
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407
Query: 373 ELV 375
+L+
Sbjct: 408 KLL 410
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 181/362 (50%), Gaps = 2/362 (0%)
Query: 15 IRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFT 74
+R A + +L+ + N +L L + A+SL ++ + PD+F+
Sbjct: 120 MRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFS 179
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
+I +C ++ A + ++ G +T+ L+ C G++ A+ F +
Sbjct: 180 YNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMK 239
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
G D V Y LI G C G+ L ++ + P Y +I FCK +
Sbjct: 240 FMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLK 299
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
+A ++ M+ R V P+V+TY LI G C V + KEA +LL+ M+ K+ P+A T+NI++
Sbjct: 300 EASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIII 359
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG-- 312
+ L K+G V +A ++ +M K+ +PD ITYN L+ G C ++++A + M +
Sbjct: 360 NKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSY 419
Query: 313 IAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAW 372
P+V SY+ +I+GLCK ++ +AL++ + K D VT + L++ K+G V+ A
Sbjct: 420 TDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAM 479
Query: 373 EL 374
EL
Sbjct: 480 EL 481
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 171/348 (49%), Gaps = 2/348 (0%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A+ + N ++ P + +N I+ L K A+ + + PD T IL+
Sbjct: 335 EALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILL 394
Query: 80 NCYCNQAQITSAFSVLAKILKRGY--RPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
C + + A +L +LK PD I++ L+ GLC ++ AL +D +V +
Sbjct: 395 GGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKL 454
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
D+VT IL+N K G A++L +QI + + + YT +I FCK +++ A
Sbjct: 455 GAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAK 514
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
L +M + P VF YN L+ C L +A +L +EM N PD +FNI++D
Sbjct: 515 GLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGS 574
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
K G++K A+++L M + G+ PD+ TY+ L++ + + +++A F+ M G P+
Sbjct: 575 LKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDA 634
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKS 365
H ++ + D+ L+ ++ K+I+ D +++D +C S
Sbjct: 635 HICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNS 682
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 154/301 (51%), Gaps = 5/301 (1%)
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFT--TLMKGLCLNGQVQTALQFHDHVVAQGF 138
C + Q+ +A SV + + G ++ F LM L + + A F+ ++
Sbjct: 47 CEDSNPQLKNAVSVFQQAVDSG---SSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDT 103
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
++ V+ L+ +M +T A ++ + + +V + I++ C++ A +
Sbjct: 104 FINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVS 163
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L EM ++PDVF+YN +I GFC +L++A +L +EM T+ IL+DA
Sbjct: 164 LLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFC 223
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
K G + EA L M G++ D++ Y SL+ G+C E+++ K +F+ + +RG +P
Sbjct: 224 KAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI 283
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+Y+ +I G CK ++ EA + M + + P+ TY+ LIDGLC G+ A +L++ +
Sbjct: 284 TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343
Query: 379 I 379
I
Sbjct: 344 I 344
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 63/113 (55%)
Query: 269 VLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLC 328
VLA+M+K+G ++ +N L+ G C E KA + M + + P+V SY+ +I G C
Sbjct: 129 VLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFC 188
Query: 329 KTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVIFI 381
+ K++++AL L EM VT+ LID CK+G++ A + ++ F+
Sbjct: 189 EGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFM 241
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 62/135 (45%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A +F + R + P ++ FN ++ +K +A SL + G+SPD+FT + L
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
IN + + A S K++ G+ PD +++K G+ + +V +
Sbjct: 606 INRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDI 665
Query: 139 RLDQVTYRILINGLC 153
LD+ +++ +C
Sbjct: 666 VLDKELTCTVMDYMC 680
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 188 bits (477), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 198/386 (51%), Gaps = 18/386 (4%)
Query: 7 LKNSLPP----------SIRNA------DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKM 50
L+NS PP +RN + ++ IF R+ + N +L L++
Sbjct: 109 LRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQN 168
Query: 51 KHYPTAISL-SHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTIT 109
+ + ++ + + GI+P+IFT +L+ C + I SA+ VL +I G P+ +T
Sbjct: 169 QRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVT 228
Query: 110 FTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQ 169
+TT++ G G +++A + + ++ +G+ D TY +L++G CK+G+ A +M ++
Sbjct: 229 YTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDME 288
Query: 170 GQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLK 229
++P+ Y ++I + CK+K +A N++ EML R +PD +I C ++
Sbjct: 289 KNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVD 348
Query: 230 EATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLM 289
EA L +M+ N PD + L+ L KEG V EA+ + K G P ++TYN+L+
Sbjct: 349 EACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLTYNTLI 407
Query: 290 DGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNII 349
G C E+ +A +++ M +R PN +Y+++I GL K V E + +L EM
Sbjct: 408 AGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCF 467
Query: 350 PDTVTYSSLIDGLCKSGRVSHAWELV 375
P+ T+ L +GL K G+ A ++V
Sbjct: 468 PNKTTFLILFEGLQKLGKEEDAMKIV 493
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 153/308 (49%), Gaps = 1/308 (0%)
Query: 34 TPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFS 93
TP I N ++ +L K +A + ++ G+ P++ T T ++ Y + + SA
Sbjct: 188 TPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKR 247
Query: 94 VLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLC 153
VL ++L RG+ PD T+T LM G C G+ A D + ++VTY ++I LC
Sbjct: 248 VLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALC 307
Query: 154 KMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVF 213
K ++ A + ++ + PD + +I + C+D V +A L+ +ML +PD
Sbjct: 308 KEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNA 367
Query: 214 TYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVM 273
+ LI+ C ++ EA KL DE +I P T+N L+ + ++G + EA + M
Sbjct: 368 LLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEKGELTEAGRLWDDM 426
Query: 274 MKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKV 333
++ KP+ TYN L++G V + + M + G PN ++ I+ GL K K
Sbjct: 427 YERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKE 486
Query: 334 DEALNLLA 341
++A+ +++
Sbjct: 487 EDAMKIVS 494
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 143/280 (51%), Gaps = 1/280 (0%)
Query: 102 GYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAA 161
G P+ T L+K LC +++A + D + + G + VTY ++ G G +A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 162 LQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYG 221
+++ ++ + PD YT+++ +CK S+A + +M + P+ TY +I
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 222 FCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPD 281
C + EA + DEM+ ++ PD+ ++DAL ++ V EA + M+K PD
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD 365
Query: 282 IITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLA 341
++L+ C V +A+ +F+ ++G P++ +Y+ +I G+C+ ++ EA L
Sbjct: 366 NALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWD 424
Query: 342 EMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVIFI 381
+M + P+ TY+ LI+GL K+G V ++++++ I
Sbjct: 425 DMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEI 464
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 140/269 (52%), Gaps = 1/269 (0%)
Query: 110 FTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQ 169
F L++ L G+ +++++ + G + + L+N L + + + + +
Sbjct: 123 FIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSK 182
Query: 170 GQL-VKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQL 228
+ P++ +++ + CK + AY + E+ + ++P++ TY ++ G+ +
Sbjct: 183 ESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDM 242
Query: 229 KEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSL 288
+ A ++L+EM+ + +PDA T+ +L+D K G EA TV+ M K ++P+ +TY +
Sbjct: 243 ESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVM 302
Query: 289 MDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNI 348
+ C + +A+++F+ M +R P+ +I+ LC+ KVDEA L +M N
Sbjct: 303 IRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNC 362
Query: 349 IPDTVTYSSLIDGLCKSGRVSHAWELVDD 377
+PD S+LI LCK GRV+ A +L D+
Sbjct: 363 MPDNALLSTLIHWLCKEGRVTEARKLFDE 391
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 86/186 (46%), Gaps = 1/186 (0%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
+ + +A ++F+ +L S P K++ +L + A L ++ PD L
Sbjct: 310 KKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALL 369
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
+ LI+ C + ++T A + + ++G P +T+ TL+ G+C G++ A + D +
Sbjct: 370 STLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYE 428
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
+ + + TY +LI GL K G + ++++ ++ P+ + I+ K D
Sbjct: 429 RKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEED 488
Query: 196 AYNLYS 201
A + S
Sbjct: 489 AMKIVS 494
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 251 NILVDAL---GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIF-N 306
N+ +D L G G + + + + GVK + + N+L++ + +F N
Sbjct: 121 NLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKN 180
Query: 307 SMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
S GI PN+ + ++++ LCK ++ A +L E+ ++P+ VTY++++ G G
Sbjct: 181 SKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARG 240
Query: 367 RVSHAWELVDDVI 379
+ A ++++++
Sbjct: 241 DMESAKRVLEEML 253
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 188 bits (477), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 188/378 (49%), Gaps = 13/378 (3%)
Query: 7 LKNSLPPSI-------------RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHY 53
LK + PSI N +++ +++M P ++ + ++ L K
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477
Query: 54 PTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTL 113
A+ S ++ I ++ LI+ +C + A V + G +PD TFTT+
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537
Query: 114 MKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLV 173
M+ + G+++ AL + G D + Y LI+ CK + LQL +Q +
Sbjct: 538 MRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKI 597
Query: 174 KPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATK 233
D+ + ++IH K + DA ++ ++ ++ PD+ TYN +I G+C + +L EA +
Sbjct: 598 SADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAER 657
Query: 234 LLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYC 293
+ + + P+ T IL+ L K ++ A + ++M ++G KP+ +TY LMD +
Sbjct: 658 IFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFS 717
Query: 294 LVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTV 353
++ + +F M ++GI+P++ SYSI+I+GLCK +VDEA N+ + ++PD V
Sbjct: 718 KSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVV 777
Query: 354 TYSSLIDGLCKSGRVSHA 371
Y+ LI G CK GR+ A
Sbjct: 778 AYAILIRGYCKVGRLVEA 795
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 177/340 (52%), Gaps = 1/340 (0%)
Query: 37 IIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLA 96
I+ NK+L L + + LS LD G +P++ T LIN +C + ++ AF +
Sbjct: 252 IVSCNKVLKGLSVDQIEVASRLLSLVLD-CGPAPNVVTFCTLINGFCKRGEMDRAFDLFK 310
Query: 97 KILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMG 156
+ +RG PD I ++TL+ G G + + + +G +LD V + I+ K G
Sbjct: 311 VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG 370
Query: 157 QTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYN 216
A + +++ Q + P+V YTI+I C+D + +A+ +Y ++L R + P + TY+
Sbjct: 371 DLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYS 430
Query: 217 ALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQ 276
+LI GFC L+ L ++M+ PD + +LVD L K+G + A M+ Q
Sbjct: 431 SLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ 490
Query: 277 GVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEA 336
++ +++ +NSL+DG+C ++ ++A +F M GI P+V +++ ++ +++EA
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEA 550
Query: 337 LNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
L L M + PD + Y +LID CK + + +L D
Sbjct: 551 LFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFD 590
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 185/394 (46%), Gaps = 37/394 (9%)
Query: 15 IRNADDAVS--IFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDI 72
+++ D A + ++ R+L +P ++ + ++ L + A + Q+ G+ P I
Sbjct: 367 VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSI 426
Query: 73 FTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDH 132
T + LI+ +C + S F++ ++K GY PD + + L+ GL G + A++F
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVK 486
Query: 133 VVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKL 192
++ Q RL+ V + LI+G C++ + AL++ R + +KPDV +T ++ +
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGR 546
Query: 193 VSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNI 252
+ +A L+ M + PD Y LI FC + +L D M I D N+
Sbjct: 547 LEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 606
Query: 253 LVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG 312
++ L K +++A +++ ++PDI+TYN+++ GYC + +++A+ IF +
Sbjct: 607 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP 666
Query: 313 IAPNVHSYSIMINGLCKTKKVDEAL----------------------------------- 337
PN + +I+I+ LCK +D A+
Sbjct: 667 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 726
Query: 338 NLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
L EM K I P V+YS +IDGLCK GRV A
Sbjct: 727 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEA 760
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 173/358 (48%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A +F + + P +I ++ ++ K L Q G+ D+ +
Sbjct: 303 DRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSST 362
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ Y + +A V ++L +G P+ +T+T L+KGLC +G++ A + ++ +G
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
VTY LI+G CK G R+ L + PDV +Y +++ K L+ A
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR 482
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
+ML + + +V +N+LI G+C +++ EA K+ M I PD TF ++
Sbjct: 483 FSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSI 542
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
EG ++EA + M K G++PD + Y +L+D +C + +F+ M + I+ ++
Sbjct: 543 MEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIA 602
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
+++I+ L K ++++A + + PD VTY+++I G C R+ A + +
Sbjct: 603 VCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE 660
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 167/309 (54%), Gaps = 5/309 (1%)
Query: 66 TGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQT 125
+G+S F L L +C + ++T A +++RG+R ++ ++KGL ++ Q++
Sbjct: 215 SGVSAHGFVLDAL---FC-KGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEV 269
Query: 126 ALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIH 185
A + V+ G + VT+ LING CK G+ A L + ++ + ++PD+ Y+ +I
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 186 SFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHP 245
+ K ++ + L+S+ L + V DV +++ I + L A+ + M+ + I P
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 246 DAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIF 305
+ T+ IL+ L ++G + EA + ++K+G++P I+TY+SL+DG+C + ++
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 306 NSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKS 365
M + G P+V Y ++++GL K + A+ +M ++I + V ++SLIDG C+
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 366 GRVSHAWEL 374
R A ++
Sbjct: 510 NRFDEALKV 518
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 140/293 (47%), Gaps = 12/293 (4%)
Query: 92 FSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILING 151
F+VL I R D F LM+ C G V AL+ + G + Q + ++N
Sbjct: 133 FNVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNS 190
Query: 152 LCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKL-----VSDAYNLYSEMLAR 206
L +G R + L+ +L + +E + H F D L V+ A + + ++ R
Sbjct: 191 L--IGSDR--VDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMER 246
Query: 207 RVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEA 266
+ + N ++ G V Q++ A++LL ++ P+ TF L++ K G + A
Sbjct: 247 GFRVGIVSCNKVLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRA 305
Query: 267 KTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMING 326
+ VM ++G++PD+I Y++L+DGY + +F+ +G+ +V +S I+
Sbjct: 306 FDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDV 365
Query: 327 LCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
K+ + A + M C+ I P+ VTY+ LI GLC+ GR+ A+ + ++
Sbjct: 366 YVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQIL 418
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 108/226 (47%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
+ +F+ + R + I N ++ L K A + L + PDI T +I
Sbjct: 585 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 644
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
YC+ ++ A + + + P+T+T T L+ LC N + A++ + +G +
Sbjct: 645 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP 704
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
+ VTY L++ K + +L ++Q + + P + Y+III CK V +A N++
Sbjct: 705 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
+ + ++LPDV Y LI G+C V +L EA L + M+ + PD
Sbjct: 765 HQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 125/270 (46%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++A+ +F R+ +M P + + ++ + K + L + IS DI ++
Sbjct: 548 EEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVV 607
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ +I A +++ PD +T+ T++ G C ++ A + + + F
Sbjct: 608 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPF 667
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ VT ILI+ LCK A+++ + + KP+ Y ++ F K + ++
Sbjct: 668 GPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFK 727
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L+ EM + + P + +Y+ +I G C ++ EAT + + + + PD + IL+
Sbjct: 728 LFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYC 787
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSL 288
K G + EA + M++ GVKPD + +L
Sbjct: 788 KVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 2/164 (1%)
Query: 14 SIRNADDAVSIFNRLLRMSP-TPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDI 72
S+R D+A IF LL+++P P + ++ L K AI + + G P+
Sbjct: 648 SLRRLDEAERIFE-LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 706
Query: 73 FTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDH 132
T L++ + I +F + ++ ++G P ++++ ++ GLC G+V A
Sbjct: 707 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 766
Query: 133 VVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPD 176
+ D V Y ILI G CK+G+ A L + VKPD
Sbjct: 767 AIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 178/338 (52%), Gaps = 2/338 (0%)
Query: 43 ILTSLVKMKHYPTAISLSHQLDFT-GISPDIFTLTILINCYCNQAQITSAFSVLAKILKR 101
IL LV+ + + + + + +QL + G+ PD+ +L C Q + +L ++
Sbjct: 170 ILNGLVRRRRFDS-VWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSL 228
Query: 102 GYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAA 161
G +P+ +T + LC + +++ A + + + G + TY +I+G CK G R A
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQA 288
Query: 162 LQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYG 221
L ++I + P+V ++ ++ FCK + + A +L+ M+ V P+++ YN LI+G
Sbjct: 289 YGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHG 348
Query: 222 FCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPD 281
C + EA LL EM + N+ PD +T+ IL++ L E V EA + M + + P
Sbjct: 349 HCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPS 408
Query: 282 IITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLA 341
TYNSL+ GYC + +A D+ + M G+ PN+ ++S +I+G C + + A+ L
Sbjct: 409 SATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYF 468
Query: 342 EMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
EM K I+PD VTY++LID K + A L D++
Sbjct: 469 EMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDML 506
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 167/311 (53%)
Query: 67 GISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA 126
GI P+++ TI I C ++ A + + K G P+ T++ ++ G C G V+ A
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQA 288
Query: 127 LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS 186
+ ++ + V + L++G CK + A L + V P++ +Y +IH
Sbjct: 289 YGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHG 348
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
CK + +A L SEM + + PDVFTY LI G CI Q+ EA +L +M + I P
Sbjct: 349 HCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPS 408
Query: 247 AYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFN 306
+ T+N L+ KE N+++A + + M GV+P+IIT+++L+DGYC V ++ A ++
Sbjct: 409 SATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYF 468
Query: 307 SMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
M +GI P+V +Y+ +I+ K + EAL L ++M I P+ T++ L+DG K G
Sbjct: 469 EMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEG 528
Query: 367 RVSHAWELVDD 377
R+S A + +
Sbjct: 529 RLSVAIDFYQE 539
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 169/312 (54%)
Query: 67 GISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA 126
G+ P+++T + +I+ YC + A+ + +IL P+ + F TL+ G C ++ TA
Sbjct: 264 GVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTA 323
Query: 127 LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS 186
H+V G + Y LI+G CK G A+ L+ +++ + PDV YTI+I+
Sbjct: 324 RSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILING 383
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
C + V++A L+ +M R+ P TYN+LI+G+C +++A L EM + P+
Sbjct: 384 LCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPN 443
Query: 247 AYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFN 306
TF+ L+D ++K A + M +G+ PD++TY +L+D + + + +A +++
Sbjct: 444 IITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYS 503
Query: 307 SMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
M + GI PN H+++ +++G K ++ A++ E + + + V ++ LI+GLC++G
Sbjct: 504 DMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNG 563
Query: 367 RVSHAWELVDDV 378
+ A D+
Sbjct: 564 YILRASRFFSDM 575
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 179/361 (49%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++A +F + + P + ++ ++ K + A L ++ + P++ L
Sbjct: 251 EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
++ +C ++ +A S+ ++K G P+ + L+ G C +G + A+ + +
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL 370
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D TY ILINGLC Q A +L ++++ + + P Y +IH +CK+ + A +
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALD 430
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L SEM A V P++ T++ LI G+C V +K A L EM K I PD T+ L+DA
Sbjct: 431 LCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHF 490
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
KE N+KEA + + M++ G+ P+ T+ L+DG+ ++ A D + Q+ N
Sbjct: 491 KEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHV 550
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
++ +I GLC+ + A ++M I PD +Y S++ G + R++ L D+
Sbjct: 551 GFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDM 610
Query: 379 I 379
I
Sbjct: 611 I 611
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 176/359 (49%), Gaps = 8/359 (2%)
Query: 6 RLKNSLPPSIRNADDAVSIFNRLLRM-SPTPPIIEFNKILTSLVKMKHYPTAISLSHQLD 64
RLK PS + + +FN L + SP I F+ ++ ++M + A+ +S ++
Sbjct: 104 RLKRHSEPS----NMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMK 159
Query: 65 FTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQ 124
SPD ++N + + S + ++ RG PD + L + G
Sbjct: 160 ---CSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYS 216
Query: 125 TALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIII 184
+ D + + G + + Y I I LC+ + A ++ ++ V P++ Y+ +I
Sbjct: 217 KKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMI 276
Query: 185 HSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIH 244
+CK V AY LY E+L +LP+V + L+ GFC +L A L MV +
Sbjct: 277 DGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVD 336
Query: 245 PDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDI 304
P+ Y +N L+ K GN+ EA +L+ M + PD+ TY L++G C+ +V +A +
Sbjct: 337 PNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRL 396
Query: 305 FNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLC 363
F M I P+ +Y+ +I+G CK +++AL+L +EM + P+ +T+S+LIDG C
Sbjct: 397 FQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYC 455
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 162/336 (48%), Gaps = 2/336 (0%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISL-SHQLDFTGISPDIFTL 75
N A ++ +L P ++ F ++ K + TA SL H + F G+ P+++
Sbjct: 284 NVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKF-GVDPNLYVY 342
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
LI+ +C + A +L+++ PD T+T L+ GLC+ QV A + +
Sbjct: 343 NCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKN 402
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
+ TY LI+G CK AL L ++ V+P++ ++ +I +C + +
Sbjct: 403 ERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKA 462
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
A LY EM + ++PDV TY ALI + +KEA +L +M+ IHP+ +TF LVD
Sbjct: 463 AMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVD 522
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
KEG + A +Q + + + L++G C + +A F+ M GI P
Sbjct: 523 GFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITP 582
Query: 316 NVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPD 351
++ SY M+ G + K++ + + L +M I+P+
Sbjct: 583 DICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPN 618
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 144/274 (52%)
Query: 105 PDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQL 164
PD+ +++ GL + + + ++++G D Y +L K G +L
Sbjct: 162 PDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKL 221
Query: 165 MRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCI 224
+ ++ +KP+V +YTI I C+D + +A ++ M VLP+++TY+A+I G+C
Sbjct: 222 LDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCK 281
Query: 225 VSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIIT 284
+++A L E++ + P+ F LVD K + A+++ M+K GV P++
Sbjct: 282 TGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYV 341
Query: 285 YNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMD 344
YN L+ G+C + +A + + M ++P+V +Y+I+INGLC +V EA L +M
Sbjct: 342 YNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMK 401
Query: 345 CKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+ I P + TY+SLI G CK + A +L ++
Sbjct: 402 NERIFPSSATYNSLIHGYCKEYNMEQALDLCSEM 435
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 143/332 (43%), Gaps = 46/332 (13%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A S+F +++ P + +N ++ K + A+ L +++ +SPD+FT TILIN
Sbjct: 323 ARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILIN 382
Query: 81 --C---------------------------------YCNQAQITSAFSVLAKILKRGYRP 105
C YC + + A + +++ G P
Sbjct: 383 GLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEP 442
Query: 106 DTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLM 165
+ ITF+TL+ G C ++ A+ + + +G D VTY LI+ K + AL+L
Sbjct: 443 NIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLY 502
Query: 166 RQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIV 225
+ + P+ + ++ F K+ +S A + Y E +R + + LI G C
Sbjct: 503 SDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQN 562
Query: 226 SQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITY 285
+ A++ +M + I PD ++ ++ +E + + + M+K G+ P+++
Sbjct: 563 GYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLV- 621
Query: 286 NSLM------DGY----CLVSEVNKAKDIFNS 307
N L+ +GY C ++ ++ K + NS
Sbjct: 622 NQLLARFYQANGYVKSACFLTNSSRLKTVSNS 653
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 185 bits (470), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 191/380 (50%), Gaps = 39/380 (10%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P + +N +L S +K + L + GI+P +T +LI C+ + + +A +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 95 LAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCK 154
++ ++G +P+ TF L++G C G L+ + + + G ++V Y +++ C+
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 155 MGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVL----P 210
G+ + +++ +++ + + PD+ + I + CK+ V DA ++S+M L P
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 211 DVFTYNALIYGFCIVSQLK-----------------------------------EATKLL 235
+ TYN ++ GFC V L+ EA +L
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349
Query: 236 DEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLV 295
+M K I P Y++NIL+D L K G + +AKT++ +M + GV PD +TY L+ GYC V
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409
Query: 296 SEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTY 355
+V+ AK + M + PN ++ +I+++ L K ++ EA LL +M+ K DTVT
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTC 469
Query: 356 SSLIDGLCKSGRVSHAWELV 375
+ ++DGLC SG + A E+V
Sbjct: 470 NIIVDGLCGSGELDKAIEIV 489
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 196/422 (46%), Gaps = 62/422 (14%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A +F+ + P F ++ K + L + ++ G+ P+ +
Sbjct: 164 DAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTI 223
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQ-FHDHVVAQG 137
++ +C + + + ++ K+ + G PD +TF + + LC G+V A + F D + +
Sbjct: 224 VSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEY 283
Query: 138 F---RLDQVTYRILINGLCKMG---------------QTRAALQ---------------- 163
R + +TY +++ G CK+G A+LQ
Sbjct: 284 LGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFI 343
Query: 164 ----LMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
+++Q+ + + P + Y I++ CK ++SDA + M V PD TY L+
Sbjct: 344 EAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLL 403
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVK 279
+G+C V ++ A LL EM+ N P+AYT NIL+ +L K G + EA+ +L M ++G
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYG 463
Query: 280 PDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA-----------------------PN 316
D +T N ++DG C E++KA +I M G A P+
Sbjct: 464 LDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPD 523
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
+ +YS ++NGLCK + EA NL AEM + + PD+V Y+ I CK G++S A+ ++
Sbjct: 524 LITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLK 583
Query: 377 DV 378
D+
Sbjct: 584 DM 585
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 182/386 (47%), Gaps = 23/386 (5%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+DA ++F + + +N L LV+ + A ++ Q+ GI P I++ IL
Sbjct: 308 EDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNIL 367
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
++ C ++ A +++ + + G PD +T+ L+ G C G+V A ++
Sbjct: 368 MDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNC 427
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ T IL++ L KMG+ A +L+R++ + D II+ C + A
Sbjct: 428 LPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIE 487
Query: 199 LYSEM-----------------------LARRVLPDVFTYNALIYGFCIVSQLKEATKLL 235
+ M + LPD+ TY+ L+ G C + EA L
Sbjct: 488 IVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLF 547
Query: 236 DEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLV 295
EM+ + + PD+ +NI + K+G + A VL M K+G + TYNSL+ G +
Sbjct: 548 AEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIK 607
Query: 296 SEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTY 355
+++ + + + M ++GI+PN+ +Y+ I LC+ +KV++A NLL EM KNI P+ ++
Sbjct: 608 NQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSF 667
Query: 356 SSLIDGLCKSGRVSHAWELVDDVIFI 381
LI+ CK A E+ + + I
Sbjct: 668 KYLIEAFCKVPDFDMAQEVFETAVSI 693
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 185/422 (43%), Gaps = 57/422 (13%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
DA +I + R P + + +L + A SL ++ P+ +T IL+
Sbjct: 379 DAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILL 438
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQF---------- 129
+ +I+ A +L K+ ++GY DT+T ++ GLC +G++ A++
Sbjct: 439 HSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSA 498
Query: 130 -------------HDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPD 176
D ++ D +TY L+NGLCK G+ A L ++ G+ ++PD
Sbjct: 499 ALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPD 558
Query: 177 VEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLD 236
Y I IH FCK +S A+ + +M + + TYN+LI G I +Q+ E L+D
Sbjct: 559 SVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMD 618
Query: 237 EMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVS 296
EM K I P+ T+N + L + V++A +L MM++ + P++ ++ L++ +C V
Sbjct: 619 EMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVP 678
Query: 297 EVNKAKDIFN----------------------------------SMPQRGIAPNVHSYSI 322
+ + A+++F ++ RG Y
Sbjct: 679 DFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKD 738
Query: 323 MINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVIFIF 382
++ LCK +++ A +L +M + D +IDGL K G A D ++ +
Sbjct: 739 LVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMA 798
Query: 383 NV 384
+V
Sbjct: 799 SV 800
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 148/308 (48%), Gaps = 6/308 (1%)
Query: 74 TLTILINCYCNQAQITSAFSVLAKILKR--GYRPDTITFTTLMKGLCLNGQVQTALQFHD 131
+L +++ + I AF + R +P + L++ +V+ +
Sbjct: 77 SLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYK 136
Query: 132 HVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDK 191
+V G T+ +LI LC AA +L ++ + KP+ + I++ +CK
Sbjct: 137 DMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAG 196
Query: 192 LVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFN 251
L L + M + VLP+ YN ++ FC + ++ K++++M + + PD TFN
Sbjct: 197 LTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFN 256
Query: 252 ILVDALGKEGNVKEAKTVLAVMMKQGV----KPDIITYNSLMDGYCLVSEVNKAKDIFNS 307
+ AL KEG V +A + + M +P+ ITYN ++ G+C V + AK +F S
Sbjct: 257 SRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFES 316
Query: 308 MPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGR 367
+ + ++ SY+I + GL + K EA +L +M K I P +Y+ L+DGLCK G
Sbjct: 317 IRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGM 376
Query: 368 VSHAWELV 375
+S A +V
Sbjct: 377 LSDAKTIV 384
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 116/225 (51%), Gaps = 12/225 (5%)
Query: 174 KPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATK 233
KP V +Y +++ S K++ V LY +M+ + P +T+N LI C S + A +
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 234 LLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYC 293
L DEM K P+ +TF ILV K G + +L M GV P+ + YN+++ +C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 294 LVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNII---- 349
+ ++ + M + G+ P++ +++ I+ LCK KV +A + ++M+ +
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 350 PDTVTYSSLIDGLCKSGRVSHAWELV------DDVIFI--FNVWM 386
P+++TY+ ++ G CK G + A L DD+ + +N+W+
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWL 333
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 178/358 (49%), Gaps = 19/358 (5%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+ A S+ ++ P ++K+L L A L ++ G+ D++T TI+
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
++ +C I A ++ + G P+ +T+T L+ +V A + + ++++G
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ VTY LI+G CK GQ A Q+ ++ G PDV+MY +
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY----------------FK 628
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
Y + R P+V TY AL+ GFC +++EA KLLD M + P+ ++ L+D L
Sbjct: 629 QYDDNSER---PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 685
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
K G + EA+ V M + G + TY+SL+D Y V + A + + M + APNV
Sbjct: 686 KVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVV 745
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
Y+ MI+GLCK K DEA L+ M+ K P+ VTY+++IDG G++ EL++
Sbjct: 746 IYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLE 803
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 179/378 (47%), Gaps = 22/378 (5%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++A+ NR+ S P ++ ++ +L + K + + + G P L
Sbjct: 319 EEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSL 378
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQ------VQTALQFHDH 132
++ YC + A+ +L K++K G+ P + + L+ +C + + A + +
Sbjct: 379 VHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSE 438
Query: 133 VVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKL 192
++A G L+++ LC G+ A ++R++ GQ PD Y+ +++ C
Sbjct: 439 MLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASK 498
Query: 193 VSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNI 252
+ A+ L+ EM ++ DV+TY ++ FC +++A K +EM P+ T+
Sbjct: 499 MELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558
Query: 253 LVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM---- 308
L+ A K V A + M+ +G P+I+TY++L+DG+C +V KA IF M
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618
Query: 309 ------------PQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYS 356
PNV +Y +++G CK+ +V+EA LL M + P+ + Y
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678
Query: 357 SLIDGLCKSGRVSHAWEL 374
+LIDGLCK G++ A E+
Sbjct: 679 ALIDGLCKVGKLDEAQEV 696
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 160/345 (46%), Gaps = 54/345 (15%)
Query: 66 TGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQT 125
G+ + ++ C C+ + AFSV+ +++ +G+ PDT T++ ++ LC +++
Sbjct: 442 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMEL 501
Query: 126 ALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIH 185
A + + G D TY I+++ CK G A + +++ P+V YT +IH
Sbjct: 502 AFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIH 561
Query: 186 SFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHP 245
++ K K VS A L+ ML+ LP++ TY+ALI G C Q+++A ++ + M P
Sbjct: 562 AYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP 621
Query: 246 DAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIF 305
D VD K+ + +P+++TY +L+DG+C V +A+ +
Sbjct: 622 D-------VDMYFKQYD------------DNSERPNVVTYGALLDGFCKSHRVEEARKLL 662
Query: 306 NSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNI----------------- 348
++M G PN Y +I+GLCK K+DEA + EM
Sbjct: 663 DAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKV 722
Query: 349 ------------------IPDTVTYSSLIDGLCKSGRVSHAWELV 375
P+ V Y+ +IDGLCK G+ A++L+
Sbjct: 723 KRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 767
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 166/338 (49%), Gaps = 11/338 (3%)
Query: 46 SLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRP 105
SL K+ + A++L +F PD T LI+ C + A L ++ P
Sbjct: 279 SLCKVGKWREALTLVETENFV---PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 106 DTITFTTLMKGLCLNG-QVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQL 164
+ +T++TL+ G CLN Q+ + + ++ +G + L++ C G A +L
Sbjct: 336 NVVTYSTLLCG-CLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKL 394
Query: 165 MRQIQGQLVKPDVEMYTIIIHSFCKDK------LVSDAYNLYSEMLARRVLPDVFTYNAL 218
++++ P +Y I+I S C DK L+ A YSEMLA V+ + ++
Sbjct: 395 LKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSF 454
Query: 219 IYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGV 278
C + ++A ++ EM+ + PD T++ +++ L ++ A + M + G+
Sbjct: 455 TRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGL 514
Query: 279 KPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALN 338
D+ TY ++D +C + +A+ FN M + G PNV +Y+ +I+ K KKV A
Sbjct: 515 VADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANE 574
Query: 339 LLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
L M + +P+ VTYS+LIDG CK+G+V A ++ +
Sbjct: 575 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFE 612
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/460 (21%), Positives = 192/460 (41%), Gaps = 90/460 (19%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+ A FN + + TP ++ + ++ + +K K A L + G P+I T + L
Sbjct: 535 EQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSAL 594
Query: 79 INCYCNQAQITSAFSVLAKIL----------------KRGYRPDTITFTTLMKGLCLNGQ 122
I+ +C Q+ A + ++ RP+ +T+ L+ G C + +
Sbjct: 595 IDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHR 654
Query: 123 VQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQ------------------- 163
V+ A + D + +G +Q+ Y LI+GLCK+G+ A +
Sbjct: 655 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 714
Query: 164 ------------LMRQIQGQLVK----PDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARR 207
L ++ ++++ P+V +YT +I CK +AY L M +
Sbjct: 715 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774
Query: 208 VLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAK 267
P+V TY A+I GF ++ +++ +LL+ M +K + P+ T+ +L+D K G + A
Sbjct: 775 CQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAH 834
Query: 268 TVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMIN-- 325
+L M + Y +++G+ E ++ + + + Q AP + Y ++I+
Sbjct: 835 NLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNL 892
Query: 326 -----------------------------------GLCKTKKVDEALNLLAEMDCKNIIP 350
LC KV+ A L +EM K +IP
Sbjct: 893 IKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIP 952
Query: 351 DTVTYSSLIDGLCKSGRVSHAWELVDDVIFIFNVWMSYAK 390
+ ++ SLI GL ++ ++S A L+D + + W+ K
Sbjct: 953 EMQSFCSLIKGLFRNSKISEALLLLDFISHMEIQWIEEKK 992
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 146/310 (47%), Gaps = 9/310 (2%)
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
L +L+ +C + A L ++ +RP T+ L++ ++ +A H +
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
R+D T R LCK+G+ R AL L ++ + PD YT +I C+ L
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFE 319
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
+A + + M A LP+V TY+ L+ G QL ++L+ M+ + +P FN LV
Sbjct: 320 EAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 379
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSE------VNKAKDIFNSM 308
A G+ A +L M+K G P + YN L+ C + ++ A+ ++ M
Sbjct: 380 HAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEM 439
Query: 309 PQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRV 368
G+ N + S LC K ++A +++ EM + IPDT TYS +++ LC + ++
Sbjct: 440 LAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKM 499
Query: 369 SHAWELVDDV 378
A+ L +++
Sbjct: 500 ELAFLLFEEM 509
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 163/365 (44%), Gaps = 9/365 (2%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A+ RL P +N ++ + +K +A + ++ + D FTL
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
C + A +++ + PDT+ +T L+ GLC + A+ F + + A
Sbjct: 279 SLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
+ VTY L+ G Q +++ + + P +++ ++H++C S AY L
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395
Query: 201 SEMLARRVLPDVFTYNALIYGFCI------VSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
+M+ +P YN LI C L A K EM+ + + +
Sbjct: 396 KKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFT 455
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
L G ++A +V+ M+ QG PD TY+ +++ C S++ A +F M + G+
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV 515
Query: 315 PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
+V++Y+IM++ CK +++A EM P+ VTY++LI K+ +VS+A EL
Sbjct: 516 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575
Query: 375 VDDVI 379
+ ++
Sbjct: 576 FETML 580
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 106/243 (43%), Gaps = 3/243 (1%)
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G++ Y L++ + + + + ++QI+ + E +++ C++ S A
Sbjct: 160 GYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIA 219
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
+ R P TYN LI F +L A+ + EM N+ D +T +
Sbjct: 220 LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYS 279
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
L K G +EA T++ + PD + Y L+ G C S +A D N M PN
Sbjct: 280 LCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPN 336
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
V +YS ++ G K++ +L M + P ++SL+ C SG S+A++L+
Sbjct: 337 VVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLK 396
Query: 377 DVI 379
++
Sbjct: 397 KMV 399
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 119/254 (46%), Gaps = 4/254 (1%)
Query: 15 IRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFT 74
++ D A + +++L S P ++ + +++ L K+ A L ++ G P++ T
Sbjct: 722 VKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVT 781
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
T +I+ + +I + +L ++ +G P+ +T+ L+ C NG + A + +
Sbjct: 782 YTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 841
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
+ YR +I G K + +L L+ +I P + +Y ++I + K + +
Sbjct: 842 QTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLE 899
Query: 195 DAYNLYSEM--LARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNI 252
A L E+ + ++ TYN+LI C+ ++++ A +L EM K + P+ +F
Sbjct: 900 MALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCS 959
Query: 253 LVDALGKEGNVKEA 266
L+ L + + EA
Sbjct: 960 LIKGLFRNSKISEA 973
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 187/368 (50%), Gaps = 3/368 (0%)
Query: 15 IRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFT 74
+R D A+ +F + P + ++ L K + A+ L ++ G SP
Sbjct: 200 LRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVI 259
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
+LI+ C + +T ++ + +G P+ +T+ TL+ GLCL G++ A+ + +V
Sbjct: 260 YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMV 319
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
+ + VTY LINGL K + A++L+ ++ + + +Y+++I K+
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAE 379
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
+A +L+ +M + P++ Y+ L+ G C + EA ++L+ M+ P+AYT++ L+
Sbjct: 380 EAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLM 439
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
K G +EA V M K G + Y+ L+DG C V V +A +++ M GI
Sbjct: 440 KGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIK 499
Query: 315 PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKN---IIPDTVTYSSLIDGLCKSGRVSHA 371
P+ +YS +I GLC +D AL L EM C+ PD VTY+ L+DGLC +S A
Sbjct: 500 PDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRA 559
Query: 372 WELVDDVI 379
+L++ ++
Sbjct: 560 VDLLNSML 567
Score = 181 bits (460), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 180/356 (50%)
Query: 24 IFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYC 83
+ N + M+ +P + FN ++ +L K++ AI + + PD +T L++ C
Sbjct: 174 VVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLC 233
Query: 84 NQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQV 143
+ +I A +L ++ G P + + L+ GLC G + + D++ +G ++V
Sbjct: 234 KEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEV 293
Query: 144 TYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEM 203
TY LI+GLC G+ A+ L+ ++ P+ Y +I+ K + +DA L S M
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSM 353
Query: 204 LARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNV 263
R + Y+ LI G + +EA L +M K P+ +++LVD L +EG
Sbjct: 354 EERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKP 413
Query: 264 KEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIM 323
EAK +L M+ G P+ TY+SLM G+ +A ++ M + G + N YS++
Sbjct: 414 NEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVL 473
Query: 324 INGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
I+GLC +V EA+ + ++M I PDTV YSS+I GLC G + A +L +++
Sbjct: 474 IDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 192/412 (46%), Gaps = 59/412 (14%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D+AV + + + +P + +N ++ L K L + G P+ T L
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ C + ++ A S+L +++ P+ +T+ TL+ GL + A++ + +G+
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
L+Q Y +LI+GL K G+ A+ L R++ + KP++ +Y++++ C++ ++A
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
+ + M+A LP+ +TY++L+ GF +EA ++ EM + + +++L+D L
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478
Query: 259 KEGNVKEAKTVLAVMMKQGVKPD------------------------------------- 281
G VKEA V + M+ G+KPD
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538
Query: 282 -IITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLC------------ 328
++TYN L+DG C+ ++++A D+ NSM RG P+V + + +N L
Sbjct: 539 DVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSF 598
Query: 329 ---------KTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
K ++V A ++ M K + P T T++ ++ +CK +++ A
Sbjct: 599 LEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAA 650
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 166/344 (48%), Gaps = 24/344 (6%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D AVS+ R++ P + + ++ LVK + A+ L ++ G + ++L
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVL 368
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ + + A S+ K+ ++G +P+ + ++ L+ GLC G+ A + + ++A G
Sbjct: 369 ISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGC 428
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ TY L+ G K G A+Q+ +++ + Y+++I C V +A
Sbjct: 429 LPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMM 488
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKN---IHPDAYTFNILVD 255
++S+ML + PD Y+++I G C + + A KL EM+ + PD T+NIL+D
Sbjct: 489 VWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLD 548
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMD-----------GYCLVSE------- 297
L + ++ A +L M+ +G PD+IT N+ ++ G + E
Sbjct: 549 GLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLK 608
Query: 298 ---VNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALN 338
V+ A I M + +AP ++++++ +CK KK++ A++
Sbjct: 609 RQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 181 bits (460), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 184/376 (48%), Gaps = 12/376 (3%)
Query: 13 PSIRNA------DDAVSIFNRLLRMSPTPPIIEF-NKILTSLVKMKHYPTAISLSHQL-- 63
PS+RN DA S+FN + S P ++F N +L S + + L +
Sbjct: 54 PSLRNPFKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILK 113
Query: 64 DFTGISPDIFTLTILIN--CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNG 121
P T IL++ C + I++ VL ++ G PD +T ++ LC G
Sbjct: 114 SQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETG 173
Query: 122 QVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQL-VKPDVEMY 180
+V A + + D TY L+ LCK + + +++ VKPD+ +
Sbjct: 174 RVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSF 233
Query: 181 TIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVT 240
TI+I + C K + +A L S++ PD F YN ++ GFC +S+ EA + +M
Sbjct: 234 TILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKE 293
Query: 241 KNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNK 300
+ + PD T+N L+ L K G V+EA+ L M+ G +PD TY SLM+G C E
Sbjct: 294 EGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLG 353
Query: 301 AKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLID 360
A + M RG APN +Y+ +++GLCK + +D+ + L M + ++ Y++L+
Sbjct: 354 ALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVR 413
Query: 361 GLCKSGRVSHAWELVD 376
L KSG+V+ A+E+ D
Sbjct: 414 SLVKSGKVAEAYEVFD 429
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 164/352 (46%), Gaps = 9/352 (2%)
Query: 14 SIRNADDAVSIFNRLLRMSPT--PPIIEFNKILTSLVKMKHYPTAISLSHQ----LDFTG 67
SI +D V +F +L+ P P F +L+ + ++IS H+ + G
Sbjct: 97 SIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPD--SSISNVHRVLNLMVNNG 154
Query: 68 ISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTAL 127
+ PD T I + C ++ A ++ ++ ++ PDT T+ L+K LC +
Sbjct: 155 LEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVY 214
Query: 128 QFHDHVVAQ-GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS 186
+F D + + D V++ ILI+ +C R A+ L+ ++ KPD +Y I+
Sbjct: 215 EFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKG 274
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
FC S+A +Y +M V PD TYN LI+G +++EA L MV PD
Sbjct: 275 FCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPD 334
Query: 247 AYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFN 306
T+ L++ + ++G A ++L M +G P+ TYN+L+ G C ++K +++
Sbjct: 335 TATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYE 394
Query: 307 SMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSL 358
M G+ + Y+ ++ L K+ KV EA + + D YS+L
Sbjct: 395 MMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 137/261 (52%), Gaps = 5/261 (1%)
Query: 123 VQTALQFHDHVVAQ--GFRLDQVTYRILINGLCKMGQTRAA--LQLMRQIQGQLVKPDVE 178
V ++ H++ FR + T+ IL++ C+ + + +++ + ++PD
Sbjct: 101 VNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQV 160
Query: 179 MYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEM 238
I + S C+ V +A +L E+ + PD +TYN L+ C L + +DEM
Sbjct: 161 TTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEM 220
Query: 239 VTK-NIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSE 297
++ PD +F IL+D + N++EA +++ + G KPD YN++M G+C +S+
Sbjct: 221 RDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSK 280
Query: 298 VNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSS 357
++A ++ M + G+ P+ +Y+ +I GL K +V+EA L M PDT TY+S
Sbjct: 281 GSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTS 340
Query: 358 LIDGLCKSGRVSHAWELVDDV 378
L++G+C+ G A L++++
Sbjct: 341 LMNGMCRKGESLGALSLLEEM 361
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 107/223 (47%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P ++ F ++ ++ K+ A+ L +L G PD F ++ +C ++ + A V
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 95 LAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCK 154
K+ + G PD IT+ TL+ GL G+V+ A + +V G+ D TY L+NG+C+
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Query: 155 MGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFT 214
G++ AL L+ +++ + P+ Y ++H CK +L+ LY M + V +
Sbjct: 348 KGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNG 407
Query: 215 YNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
Y L+ ++ EA ++ D V DA ++ L L
Sbjct: 408 YATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLETTL 450
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 145/339 (42%), Gaps = 8/339 (2%)
Query: 2 SSFLRLKNSLPPSIRNADDAVSIFNRLLRM----SPTPPIIEFNKILTSLVKMKHYPTAI 57
S+FL L L + R D ++S +R+L + P + + + SL + A
Sbjct: 123 STFLIL---LSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 58 SLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKR-GYRPDTITFTTLMKG 116
L +L PD +T L+ C + + + ++ +PD ++FT L+
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDN 239
Query: 117 LCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPD 176
+C + ++ A+ + GF+ D Y ++ G C + + A+ + ++++ + V+PD
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD 299
Query: 177 VEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLD 236
Y +I K V +A M+ PD TY +L+ G C + A LL+
Sbjct: 300 QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLE 359
Query: 237 EMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVS 296
EM + P+ T+N L+ L K + + + +M GVK + Y +L+
Sbjct: 360 EMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSG 419
Query: 297 EVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDE 335
+V +A ++F+ + +YS + L KK E
Sbjct: 420 KVAEAYEVFDYAVDSKSLSDASAYSTLETTLKWLKKAKE 458
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 89/194 (45%), Gaps = 34/194 (17%)
Query: 193 VSDAYNLYSEMLARRVLP-DVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFN 251
+SDA +L++ + A +P D+ +N+++ + ++ + + KL +
Sbjct: 65 LSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHI------------- 111
Query: 252 ILVDALGKEGNVKEAKTVLAVMMKQGVK-PDIITYNSLMDGYCLVSEVNKAKDIFNSMPQ 310
L + N + ++ +++ + PD S ++ + N M
Sbjct: 112 -----LKSQPNFRPGRSTFLILLSHACRAPD--------------SSISNVHRVLNLMVN 152
Query: 311 RGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSH 370
G+ P+ + I + LC+T +VDEA +L+ E+ K+ PDT TY+ L+ LCK +
Sbjct: 153 NGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHV 212
Query: 371 AWELVDDVIFIFNV 384
+E VD++ F+V
Sbjct: 213 VYEFVDEMRDDFDV 226
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 181 bits (460), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 174/316 (55%)
Query: 56 AISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMK 115
A ++ ++ +G P++ T LI + ++ A VL ++ ++G PD + +L+
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 116 GLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKP 175
GL ++ A F +V G + + TY I+G + + +A + +++++ V P
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555
Query: 176 DVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLL 235
+ + T +I+ +CK V +A + Y M+ + +L D TY L+ G ++ +A ++
Sbjct: 556 NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIF 615
Query: 236 DEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLV 295
EM K I PD +++ +L++ K GN+++A ++ M+++G+ P++I YN L+ G+C
Sbjct: 616 REMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRS 675
Query: 296 SEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTY 355
E+ KAK++ + M +G+ PN +Y +I+G CK+ + EA L EM K ++PD+ Y
Sbjct: 676 GEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVY 735
Query: 356 SSLIDGLCKSGRVSHA 371
++L+DG C+ V A
Sbjct: 736 TTLVDGCCRLNDVERA 751
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 191/398 (47%), Gaps = 35/398 (8%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
RNAD A + + ++ ++ + + K A +L + +G+ P
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
LI YC + + + +L ++ KR T+ T++KG+C +G + A ++A
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
G R + V Y LI + + A++++++++ Q + PD+ Y +I K K + +
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEM----------------- 238
A + EM+ + P+ FTY A I G+ S+ A K + EM
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565
Query: 239 ------------------VTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKP 280
V + I DA T+ +L++ L K V +A+ + M +G+ P
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 281 DIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLL 340
D+ +Y L++G+ + + KA IF+ M + G+ PNV Y++++ G C++ ++++A LL
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL 685
Query: 341 AEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
EM K + P+ VTY ++IDG CKSG ++ A+ L D++
Sbjct: 686 DEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 186/358 (51%), Gaps = 1/358 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A +I ++ P ++ + ++ + ++ + A+ + ++ GI+PDIF L
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I ++ A S L ++++ G +P+ T+ + G + +A ++ + G
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
++V LIN CK G+ A R + Q + D + YT++++ K+ V DA
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
++ EM + + PDVF+Y LI GF + +++A+ + DEMV + + P+ +N+L+
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
+ G +++AK +L M +G+ P+ +TY +++DGYC ++ +A +F+ M +G+ P+
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF 733
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
Y+ +++G C+ V+ A+ + + K T +++LI+ + K G+ E+++
Sbjct: 734 VYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLN 790
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 178/368 (48%), Gaps = 5/368 (1%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
+ D+A S ++ P + ++ ++ + +A ++ G+ P+
Sbjct: 501 KRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLC 560
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
T LIN YC + ++ A S ++ +G D T+T LM GL N +V A + +
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
+G D +Y +LING K+G + A + ++ + + P+V +Y +++ FC+ +
Sbjct: 621 KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEK 680
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
A L EM + + P+ TY +I G+C L EA +L DEM K + PD++ + LVD
Sbjct: 681 AKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMP----QR 311
+ +V+ A T+ K+G +N+L++ + ++ N + R
Sbjct: 741 GCCRLNDVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDR 799
Query: 312 GIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
PN +Y+IMI+ LCK ++ A L +M N++P +TY+SL++G K GR +
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859
Query: 372 WELVDDVI 379
+ + D+ I
Sbjct: 860 FPVFDEAI 867
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 185/399 (46%), Gaps = 35/399 (8%)
Query: 15 IRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFT 74
I+ +DA S+ + + + ++ ++ L+K ++ A L H++ GI+ +
Sbjct: 290 IKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYM 349
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
I + + A ++ ++ G P + +L++G C V+ + +
Sbjct: 350 YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMK 409
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
+ + TY ++ G+C G A +++++ +P+V +YT +I +F ++
Sbjct: 410 KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFG 469
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNI-- 252
DA + EM + + PD+F YN+LI G ++ EA L EMV + P+A+T+
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 253 ---------------------------------LVDALGKEGNVKEAKTVLAVMMKQGVK 279
L++ K+G V EA + M+ QG+
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 280 PDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNL 339
D TY LM+G +V+ A++IF M +GIAP+V SY ++ING K + +A ++
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649
Query: 340 LAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
EM + + P+ + Y+ L+ G C+SG + A EL+D++
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 173/398 (43%), Gaps = 35/398 (8%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N D A+ + ++ P ++ ++ L K+K A SL ++D G+S D T +
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYS 316
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
+LI+ +A ++ +++ G + + + G ++ A D ++A
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS 376
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G Y LI G C+ R +L+ +++ + + Y ++ C + A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
YN+ EM+A P+V Y LI F S+ +A ++L EM + I PD + +N L+
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
L K + EA++ L M++ G+KP+ TY + + GY SE A M + G+ PN
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Query: 317 -----------------------------------VHSYSIMINGLCKTKKVDEALNLLA 341
+Y++++NGL K KVD+A +
Sbjct: 557 KVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFR 616
Query: 342 EMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
EM K I PD +Y LI+G K G + A + D+++
Sbjct: 617 EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 172/381 (45%), Gaps = 21/381 (5%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++AV +F+ + + P + +L +L++ + + + D+ T +L
Sbjct: 168 EEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHML 227
Query: 79 INCYCNQAQITSAFSVLAKILK---------------------RGYRPDTITFTTLMKGL 117
I +C + VL K K +G P T+ L+ GL
Sbjct: 228 IIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGL 287
Query: 118 CLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDV 177
C +++ A + + G LD TY +LI+GL K AA L+ ++ +
Sbjct: 288 CKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKP 347
Query: 178 EMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDE 237
MY I K+ ++ A L+ M+A ++P Y +LI G+C +++ +LL E
Sbjct: 348 YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVE 407
Query: 238 MVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSE 297
M +NI YT+ +V + G++ A ++ M+ G +P+++ Y +L+ + S
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR 467
Query: 298 VNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSS 357
A + M ++GIAP++ Y+ +I GL K K++DEA + L EM + P+ TY +
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527
Query: 358 LIDGLCKSGRVSHAWELVDDV 378
I G ++ + A + V ++
Sbjct: 528 FISGYIEASEFASADKYVKEM 548
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 123/311 (39%), Gaps = 78/311 (25%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N A SIF+ ++ TP +I +N +L + A L ++ G+ P+ T
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTAL--------- 127
+I+ YC + AF + ++ +G PD+ +TTL+ G C V+ A+
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKG 761
Query: 128 -----------------------------QFHDHVVAQGFRLDQVTYRILINGLCKMGQT 158
+ D + + + VTY I+I+ LCK G
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821
Query: 159 RAALQLMRQIQ-----------------------------------GQLVKPDVEMYTII 183
AA +L Q+Q ++PD MY++I
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVI 881
Query: 184 IHSFCKDKLVSDAYNLYSEMLARRVLPD-----VFTYNALIYGFCIVSQLKEATKLLDEM 238
I++F K+ + + A L +M A+ + D + T AL+ GF V +++ A K+++ M
Sbjct: 882 INAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENM 941
Query: 239 VTKNIHPDAYT 249
V PD+ T
Sbjct: 942 VRLQYIPDSAT 952
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 137/328 (41%), Gaps = 65/328 (19%)
Query: 83 CNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQ 142
CN A SV+ ++++R + P ++++ V+ + +F G D
Sbjct: 108 CNFGSFEKALSVVERMIERNW-PVAEVWSSI---------VRCSQEF------VGKSDDG 151
Query: 143 VTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSE 202
V + IL +G G A+ + G + P + +++ + + + +++Y
Sbjct: 152 VLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKG 211
Query: 203 MLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGN 262
M+ R V+ DV TY+ LI C ++ L + V + T + VD K
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQ-----LGKDVLFKTEKEFRTATLNVDGALK--- 263
Query: 263 VKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSI 322
+KE+ M+ +G+ P TY+ L+DG C + + AK + M G++ + H+YS+
Sbjct: 264 LKES------MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 323 MINGLCKTKKVDEALNLLAEM------------DC-----------------------KN 347
+I+GL K + D A L+ EM DC
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 348 IIPDTVTYSSLIDGLCKSGRVSHAWELV 375
+IP Y+SLI+G C+ V +EL+
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELL 405
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 141/334 (42%), Gaps = 59/334 (17%)
Query: 84 NQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQV-------------QTALQFH 130
N +++ A + +A ILK+ DT+ + L + +N +V L F
Sbjct: 27 NVEKLSDASAEIAGILKQENWRDTLVSSNL--SIEINPEVVLSVLRSKRVDDPSKLLSFF 84
Query: 131 DHVVAQGF---RLDQVTYRILINGLCKMGQTRAALQLM-RQIQGQLVKPDVEMYTIIIHS 186
+ V +Q +LD ++ L LC G AL ++ R I+ P E+++ I+
Sbjct: 85 NWVDSQKVTEQKLDSFSFLAL--DLCNFGSFEKALSVVERMIERNW--PVAEVWSSIVR- 139
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
C + V + D + L G+ ++EA + + + P
Sbjct: 140 -CSQEFVGKS-------------DDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPR 185
Query: 247 AYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIF- 305
+L+DAL + + V M+++ V D+ TY+ L+ +C V KD+
Sbjct: 186 LSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLF 245
Query: 306 --------------------NSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDC 345
SM +G+ P ++Y ++I+GLCK K++++A +LL EMD
Sbjct: 246 KTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDS 305
Query: 346 KNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+ D TYS LIDGL K A LV +++
Sbjct: 306 LGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 9/175 (5%)
Query: 23 SIFNRLLRMS----PTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+ NRL+ S P + +N ++ L K + A L HQ+ + P + T T L
Sbjct: 787 EVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ-- 136
+N Y + F V + + G PD I ++ ++ G AL D + A+
Sbjct: 847 LNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNA 906
Query: 137 ---GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFC 188
G +L T R L++G K+G+ A ++M + PD +I+ C
Sbjct: 907 VDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 181 bits (460), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 171/345 (49%), Gaps = 35/345 (10%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N DA +F+ + + S P ++ FN ++ K+ + L HQ++ + PD+FT +
Sbjct: 255 NISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYS 314
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
LIN C + ++ A + ++ KRG P+ + FTTL+ G NG++ + + ++++
Sbjct: 315 ALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSK 374
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G ++PD+ +Y +++ FCK+ + A
Sbjct: 375 G-----------------------------------LQPDIVLYNTLVNGFCKNGDLVAA 399
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
N+ M+ R + PD TY LI GFC ++ A ++ EM I D F+ LV
Sbjct: 400 RNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCG 459
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
+ KEG V +A+ L M++ G+KPD +TY +MD +C + + M G P+
Sbjct: 460 MCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPS 519
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDG 361
V +Y++++NGLCK ++ A LL M ++PD +TY++L++G
Sbjct: 520 VVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 177/362 (48%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
DA+ F + PI +L ++K+ T ++ G +++ IL+
Sbjct: 188 DAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILM 247
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
N +C + I+ A V +I KR +P ++F TL+ G C G + + + R
Sbjct: 248 NKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTR 307
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
D TY LIN LCK + A L ++ + + P+ ++T +IH ++ +
Sbjct: 308 PDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKES 367
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
Y +ML++ + PD+ YN L+ GFC L A ++D M+ + + PD T+ L+D +
Sbjct: 368 YQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCR 427
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
G+V+ A + M + G++ D + +++L+ G C V A+ M + GI P+ +
Sbjct: 428 GGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVT 487
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
Y++M++ CK LL EM +P VTY+ L++GLCK G++ +A L+D ++
Sbjct: 488 YTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAML 547
Query: 380 FI 381
I
Sbjct: 548 NI 549
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 181 bits (460), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 175/358 (48%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D+A ++F + TP I F ++ L K+ A + ++ + + T L
Sbjct: 429 DEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSL 488
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I + N + + ++ + PD T M + G+ + + + A+ F
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRF 548
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D +Y ILI+GL K G +L ++ Q D Y I+I FCK V+ AY
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQ 608
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L EM + P V TY ++I G + +L EA L +E +K I + ++ L+D G
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
K G + EA +L +M++G+ P++ T+NSL+D E+N+A F SM + PN
Sbjct: 669 KVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQV 728
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
+Y I+INGLCK +K ++A EM + + P T++Y+++I GL K+G ++ A L D
Sbjct: 729 TYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFD 786
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 175/360 (48%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
DDA ++ ++L I + ++ + + + SPD+ L
Sbjct: 464 DDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTY 523
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
++C + ++ +I R + PD +++ L+ GL G + + QG
Sbjct: 524 MDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGC 583
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
LD Y I+I+G CK G+ A QL+ +++ + +P V Y +I K + +AY
Sbjct: 584 VLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYM 643
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L+ E ++R+ +V Y++LI GF V ++ EA +L+E++ K + P+ YT+N L+DAL
Sbjct: 644 LFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALV 703
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
K + EA M + P+ +TY L++G C V + NKA + M ++G+ P+
Sbjct: 704 KAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTI 763
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
SY+ MI+GL K + EA L +PD+ Y+++I+GL R A+ L ++
Sbjct: 764 SYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEET 823
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 180/361 (49%), Gaps = 1/361 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D+A S+ R P +I +N ILT L KM A+ + ++ +P++ T IL
Sbjct: 325 DEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNIL 383
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ C ++ +AF + + K G P+ T ++ LC + ++ A + + +
Sbjct: 384 IDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVC 443
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D++T+ LI+GL K+G+ A ++ ++ + + +YT +I +F D +
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHK 503
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
+Y +M+ + PD+ N + + ++ + +E+ + PDA +++IL+ L
Sbjct: 504 IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI 563
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
K G E + M +QG D YN ++DG+C +VNKA + M +G P V
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+Y +I+GL K ++DEA L E K I + V YSSLIDG K GR+ A+ +++++
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL 683
Query: 379 I 379
+
Sbjct: 684 M 684
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 177/354 (50%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A + + + + P + N ++ L K + A ++ ++D+ +PD T L
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSL 453
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ ++ A+ V K+L R ++I +T+L+K +G+ + + + ++ Q
Sbjct: 454 IDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNC 513
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D ++ + K G+ + +I+ + PD Y+I+IH K ++ Y
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 573
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L+ M + + D YN +I GFC ++ +A +LL+EM TK P T+ ++D L
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
K + EA + + ++ +++ Y+SL+DG+ V +++A I + Q+G+ PN++
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLY 693
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAW 372
+++ +++ L K ++++EAL M P+ VTY LI+GLCK + + A+
Sbjct: 694 TWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAF 747
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 181/400 (45%), Gaps = 35/400 (8%)
Query: 15 IRNADDAVSIFNRLLRMSPTPPIIE-FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIF 73
+++ + A+ F R + P E +N +L + + +++ + ++ G P +
Sbjct: 75 LKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVN 134
Query: 74 TLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHV 133
T ++ ++ + V+ + K +RP +TTL+ L +
Sbjct: 135 TCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQM 194
Query: 134 VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLV 193
G+ + LI G K G+ +AL L+ +++ + D+ +Y + I SF K V
Sbjct: 195 QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKV 254
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
A+ + E+ A + PD TY ++I C ++L EA ++ + + P Y +N +
Sbjct: 255 DMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTM 314
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDII------------------------------ 283
+ G G EA ++L +G P +I
Sbjct: 315 IMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA 374
Query: 284 ----TYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNL 339
TYN L+D C +++ A ++ +SM + G+ PNV + +IM++ LCK++K+DEA +
Sbjct: 375 PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAM 434
Query: 340 LAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
EMD K PD +T+ SLIDGL K GRV A+++ + ++
Sbjct: 435 FEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML 474
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 184/435 (42%), Gaps = 71/435 (16%)
Query: 14 SIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIF 73
++ ++D +++F ++ + P + F ++ K +A+SL ++ + + DI
Sbjct: 180 AVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIV 239
Query: 74 TLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHV 133
+ I+ + ++ A+ +I G +PD +T+T+++ LC ++ A++ +H+
Sbjct: 240 LYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
Query: 134 V-----------------------------------AQGFRLDQVTYRILINGLCKMGQT 158
A+G + Y ++ L KMG+
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKV 359
Query: 159 RAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNAL 218
AL++ +++ + P++ Y I+I C+ + A+ L M + P+V T N +
Sbjct: 360 DEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIM 418
Query: 219 IYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMM---- 274
+ C +L EA + +EM K PD TF L+D LGK G V +A V M+
Sbjct: 419 VDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDC 478
Query: 275 -------------------------------KQGVKPDIITYNSLMDGYCLVSEVNKAKD 303
Q PD+ N+ MD E K +
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRA 538
Query: 304 IFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLC 363
+F + R P+ SYSI+I+GL K +E L M + + DT Y+ +IDG C
Sbjct: 539 MFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598
Query: 364 KSGRVSHAWELVDDV 378
K G+V+ A++L++++
Sbjct: 599 KCGKVNKAYQLLEEM 613
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 116/243 (47%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P ++ + ++ L K+ A L + I ++ + LI+ + +I A+ +
Sbjct: 620 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 95 LAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCK 154
L +++++G P+ T+ +L+ L ++ AL + +QVTY ILINGLCK
Sbjct: 680 LEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCK 739
Query: 155 MGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFT 214
+ + A +++Q Q +KP YT +I K +++A L+ A +PD
Sbjct: 740 VRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSAC 799
Query: 215 YNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMM 274
YNA+I G ++ +A L +E + + T +L+D L K +++A V AV+
Sbjct: 800 YNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLR 859
Query: 275 KQG 277
+ G
Sbjct: 860 ETG 862
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 179/344 (52%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P +N I+ + VK + + + + G+ + T T+L+ +++ A +
Sbjct: 257 PEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKL 316
Query: 95 LAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCK 154
++ +RG D +T+L+ C G ++ A D + +G TY LI+G+CK
Sbjct: 317 FDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCK 376
Query: 155 MGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFT 214
+G+ AA LM ++Q + V ++ +I +C+ +V +A +Y M + DVFT
Sbjct: 377 VGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFT 436
Query: 215 YNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMM 274
N + F + + EA + L M+ + ++ L+D KEGNV+EAK + M
Sbjct: 437 CNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMS 496
Query: 275 KQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVD 334
+GV+P+ ITYN ++ YC ++ +A+ + +M G+ P+ ++Y+ +I+G C VD
Sbjct: 497 SKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVD 556
Query: 335 EALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
EA+ L +EM K + ++VTY+ +I GL K+G+ A+ L D++
Sbjct: 557 EAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEM 600
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 167/363 (46%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
R D + IF R++ + ++ L + + L + GI P+ +T
Sbjct: 203 RRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTY 262
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
+IN Y Q + VL + K G + +T+T LM+ NG++ A + D +
Sbjct: 263 NTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRE 322
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
+G D Y LI+ C+ G + A L ++ + + P Y +I CK +
Sbjct: 323 RGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGA 382
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
A L +EM ++ V +N LI G+C + EA+ + D M K D +T N +
Sbjct: 383 AEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIAS 442
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
+ EAK L MM+ GVK ++Y +L+D YC V +AK +F M +G+ P
Sbjct: 443 CFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQP 502
Query: 316 NVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
N +Y++MI CK K+ EA L A M+ + PD+ TY+SLI G C + V A L
Sbjct: 503 NAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLF 562
Query: 376 DDV 378
++
Sbjct: 563 SEM 565
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 148/333 (44%), Gaps = 35/333 (10%)
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
++ Y + V ++K+G D + + ++ L+ +V
Sbjct: 159 LVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDS 218
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDK----- 191
G ++ + I++ GLC+ G+ + +L+++ + +KP+ Y II+++ K +
Sbjct: 219 GVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGV 278
Query: 192 ------------------------------LVSDAYNLYSEMLARRVLPDVFTYNALIYG 221
+SDA L+ EM R + DV Y +LI
Sbjct: 279 EGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISW 338
Query: 222 FCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPD 281
C +K A L DE+ K + P +YT+ L+D + K G + A+ ++ M +GV
Sbjct: 339 NCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNIT 398
Query: 282 IITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLA 341
+ +N+L+DGYC V++A I++ M Q+G +V + + + + + K+ DEA L
Sbjct: 399 QVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLF 458
Query: 342 EMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
M + TV+Y++LID CK G V A L
Sbjct: 459 RMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRL 491
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 153/317 (48%), Gaps = 4/317 (1%)
Query: 14 SIRNA--DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPD 71
S++N DA +F+ + + + +++ + + A L +L G+SP
Sbjct: 304 SVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPS 363
Query: 72 IFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHD 131
+T LI+ C ++ +A ++ ++ +G + F TL+ G C G V A +D
Sbjct: 364 SYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYD 423
Query: 132 HVVAQGFRLDQVTYRILINGLCKMGQTRAALQ-LMRQIQGQLVKPDVEMYTIIIHSFCKD 190
+ +GF+ D T + + ++ + A Q L R ++G VK YT +I +CK+
Sbjct: 424 VMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGG-VKLSTVSYTNLIDVYCKE 482
Query: 191 KLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTF 250
V +A L+ EM ++ V P+ TYN +IY +C ++KEA KL M + PD+YT+
Sbjct: 483 GNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTY 542
Query: 251 NILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQ 310
L+ NV EA + + M +G+ + +TY ++ G + ++A +++ M +
Sbjct: 543 TSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKR 602
Query: 311 RGIAPNVHSYSIMINGL 327
+G + Y+ +I +
Sbjct: 603 KGYTIDNKVYTALIGSM 619
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 128/257 (49%)
Query: 120 NGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEM 179
NG + L+ D++V +G +D+ + + + K + L++ R++ VK V
Sbjct: 167 NGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYS 226
Query: 180 YTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMV 239
TI++ C+ V + L E + + P+ +TYN +I + +L M
Sbjct: 227 LTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMK 286
Query: 240 TKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVN 299
+ + T+ +L++ K G + +A+ + M ++G++ D+ Y SL+ C +
Sbjct: 287 KDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMK 346
Query: 300 KAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLI 359
+A +F+ + ++G++P+ ++Y +I+G+CK ++ A L+ EM K + V +++LI
Sbjct: 347 RAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLI 406
Query: 360 DGLCKSGRVSHAWELVD 376
DG C+ G V A + D
Sbjct: 407 DGYCRKGMVDEASMIYD 423
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 73/151 (48%)
Query: 228 LKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNS 287
+E ++ D MV K + D + + + A K + + M+ GVK + +
Sbjct: 170 FEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTI 229
Query: 288 LMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKN 347
+++G C EV K+K + +GI P ++Y+ +IN K + +L M
Sbjct: 230 VVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG 289
Query: 348 IIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
++ + VTY+ L++ K+G++S A +L D++
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 184/353 (52%), Gaps = 1/353 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
DD + I+ R+ + + ++ ++ L + A S+ ++LD S D+ T +
Sbjct: 272 DDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTM 331
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
+ +C +I + L +I++ + +++ L+KGL NG++ A + A+G+
Sbjct: 332 LGGFCRCGKIKESLE-LWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGY 390
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D+ TY I I+GLC G AL +M++++ DV Y II CK K + +A N
Sbjct: 391 AADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASN 450
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L EM V + NALI G S+L EA+ L EM P ++NIL+ L
Sbjct: 451 LVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLC 510
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
K G EA + M++ G KPD+ TY+ L+ G C +++ A ++++ Q G+ +V
Sbjct: 511 KAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVM 570
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
++I+I+GLC K+D+A+ ++A M+ +N + VTY++L++G K G + A
Sbjct: 571 MHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRA 623
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 190/373 (50%), Gaps = 9/373 (2%)
Query: 8 KNSLPPSIRNADDAVSIFNRLLRMSPTPPIIE-FNKILTSLVKMKHYPTAISLSHQLDFT 66
KNS+P D A+ +F R+ + P I +N +L + V+ K + SL +
Sbjct: 90 KNSMP------DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETA 143
Query: 67 GISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA 126
G++P++ T +LI C + + A L + K G++PD +++T++ L G++ A
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA 203
Query: 127 LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLM-RQIQGQLVKPDVEMYTIIIH 185
L+ D + +G D Y ILI+G K + A++L R ++ V P+V+ + I+I
Sbjct: 204 LELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMIS 263
Query: 186 SFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHP 245
K V D ++ M D++TY++LI+G C + +A + +E+ +
Sbjct: 264 GLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI 323
Query: 246 DAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIF 305
D T+N ++ + G +KE+ + +M + +I++YN L+ G ++++A I+
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIW 382
Query: 306 NSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKS 365
MP +G A + +Y I I+GLC V++AL ++ E++ D Y+S+ID LCK
Sbjct: 383 RLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKK 442
Query: 366 GRVSHAWELVDDV 378
R+ A LV ++
Sbjct: 443 KRLEEASNLVKEM 455
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 168/362 (46%), Gaps = 1/362 (0%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N D A S+FN L + ++ +N +L + ++ L ++ S +I +
Sbjct: 305 NVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYN 363
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
ILI +I A + + +GY D T+ + GLC+NG V AL V +
Sbjct: 364 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 423
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G LD Y +I+ LCK + A L++++ V+ + + +I +D + +A
Sbjct: 424 GGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA 483
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
EM P V +YN LI G C + EA+ + EM+ PD T++IL+
Sbjct: 484 SFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCG 543
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
L ++ + A + ++ G++ D++ +N L+ G C V +++ A + +M R N
Sbjct: 544 LCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTAN 603
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
+ +Y+ ++ G K + A + M + PD ++Y++++ GLC VS+A E D
Sbjct: 604 LVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFD 663
Query: 377 DV 378
D
Sbjct: 664 DA 665
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 146/272 (53%)
Query: 56 AISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMK 115
A+ + +++ +G D++ +I+C C + ++ A +++ ++ K G ++ L+
Sbjct: 413 ALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIG 472
Query: 116 GLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKP 175
GL + ++ A F + G R V+Y ILI GLCK G+ A ++++ KP
Sbjct: 473 GLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKP 532
Query: 176 DVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLL 235
D++ Y+I++ C+D+ + A L+ + L + DV +N LI+G C V +L +A ++
Sbjct: 533 DLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVM 592
Query: 236 DEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLV 295
M +N + T+N L++ K G+ A + M K G++PDII+YN++M G C+
Sbjct: 593 ANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMC 652
Query: 296 SEVNKAKDIFNSMPQRGIAPNVHSYSIMINGL 327
V+ A + F+ GI P V++++I++ +
Sbjct: 653 RGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 106/217 (48%)
Query: 41 NKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILK 100
N ++ L++ A ++ G P + + ILI C + A + + ++L+
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 101 RGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRA 160
G++PD T++ L+ GLC + ++ AL+ + G D + + ILI+GLC +G+
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 161 ALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIY 220
A+ +M ++ + ++ Y ++ F K + A ++ M + PD+ +YN ++
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMK 647
Query: 221 GFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
G C+ + A + D+ I P YT+NILV A+
Sbjct: 648 GLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 70/136 (51%)
Query: 244 HPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKD 303
P ++N L++A + + +++ A GV P++ TYN L+ C E KA+
Sbjct: 111 EPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARG 170
Query: 304 IFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLC 363
+ M + G P+V SYS +IN L K K+D+AL L EM + + PD Y+ LIDG
Sbjct: 171 FLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFL 230
Query: 364 KSGRVSHAWELVDDVI 379
K A EL D ++
Sbjct: 231 KEKDHKTAMELWDRLL 246
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 75/167 (44%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A + +L P + ++ +L L + + A+ L HQ +G+ D+ ILI
Sbjct: 517 EASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILI 576
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ C+ ++ A +V+A + R + +T+ TLM+G G A ++ G +
Sbjct: 577 HGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQ 636
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS 186
D ++Y ++ GLC A++ + + P V + I++ +
Sbjct: 637 PDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRA 683
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 192/380 (50%), Gaps = 8/380 (2%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
+ +DA +F+ +L P +I +N ++ K + + + ++ I P + T
Sbjct: 228 KRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITF 287
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
L+ + A +VL ++ G+ PD TF+ L G N + + AL ++ V
Sbjct: 288 NTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVD 347
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
G +++ T IL+N LCK G+ A +++ + + + P+ +Y +I +C+ +
Sbjct: 348 SGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVG 407
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
A M + + PD YN LI FC + +++ A K +++M K + P T+NIL+
Sbjct: 408 ARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIG 467
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
G++ + +L M G P++++Y +L++ C S++ +A+ + M RG++P
Sbjct: 468 GYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSP 527
Query: 316 NVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
V Y+++I+G C K+++A EM K I + VTY++LIDGL +G++S A +L+
Sbjct: 528 KVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLL 587
Query: 376 DDV--------IFIFNVWMS 387
++ +F +N +S
Sbjct: 588 LEISRKGLKPDVFTYNSLIS 607
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 177/362 (48%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N + + + R+ P +I FN +L L K A ++ ++ G PD FT +
Sbjct: 264 NPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFS 323
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
IL + Y + + +A V + G + + T + L+ LC G+++ A + +A+
Sbjct: 324 ILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK 383
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G ++V Y +I+G C+ G A + ++ Q +KPD Y +I FC+ + +A
Sbjct: 384 GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENA 443
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
++M + V P V TYN LI G+ + + +L EM P+ ++ L++
Sbjct: 444 EKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINC 503
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
L K + EA+ V M +GV P + YN L+DG C ++ A M ++GI N
Sbjct: 504 LCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELN 563
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
+ +Y+ +I+GL T K+ EA +LL E+ K + PD TY+SLI G +G V L +
Sbjct: 564 LVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYE 623
Query: 377 DV 378
++
Sbjct: 624 EM 625
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 171/356 (48%), Gaps = 22/356 (6%)
Query: 19 DDAVSIFNRLLRMSPTP---PIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
+ A + + LLR TP P F+ S +KH DF+ L
Sbjct: 72 ETARGVLSSLLRSDSTPFASPKELFSAFSLSSPSLKH-----------DFS-----YLLL 115
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
++L+N I+ A + + G P + + T L+ L Q + + +++
Sbjct: 116 SVLLN---ESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILE 172
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
FR + Y I K+ L+L +++ + P V +Y ++I CK K ++D
Sbjct: 173 SDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMND 232
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
A L+ EMLARR+LP + TYN LI G+C +++ K+ + M +I P TFN L+
Sbjct: 233 AEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLK 292
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
L K G V++A+ VL M G PD T++ L DGY + A ++ + G+
Sbjct: 293 GLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKM 352
Query: 316 NVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
N ++ SI++N LCK K+++A +L K ++P+ V Y+++IDG C+ G + A
Sbjct: 353 NAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA 408
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 177/350 (50%)
Query: 22 VSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINC 81
+++F +L P + K + + VK+ + L +++ I P +F +LI+
Sbjct: 164 INVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDG 223
Query: 82 YCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLD 141
C ++ A + ++L R P IT+ TL+ G C G + + + + + A
Sbjct: 224 LCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPS 283
Query: 142 QVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYS 201
+T+ L+ GL K G A ++++++ PD ++I+ + ++ A +Y
Sbjct: 284 LITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYE 343
Query: 202 EMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEG 261
+ V + +T + L+ C ++++A ++L + K + P+ +N ++D ++G
Sbjct: 344 TAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKG 403
Query: 262 NVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYS 321
++ A+ + M KQG+KPD + YN L+ +C + E+ A+ N M +G++P+V +Y+
Sbjct: 404 DLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYN 463
Query: 322 IMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
I+I G + + D+ ++L EM+ +P+ V+Y +LI+ LCK ++ A
Sbjct: 464 ILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 189/392 (48%), Gaps = 11/392 (2%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+DA ++ + + P F+ + + A+ + +G+ + +T +IL
Sbjct: 301 EDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSIL 360
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
+N C + +I A +L + + +G P+ + + T++ G C G + A + + QG
Sbjct: 361 LNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGM 420
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ D + Y LI C++G+ A + + +++ + V P VE Y I+I + + ++
Sbjct: 421 KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 480
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
+ EM +P+V +Y LI C S+L EA + +M + + P +N+L+D
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCC 540
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
+G +++A M+K+G++ +++TYN+L+DG + ++++A+D+ + ++G+ P+V
Sbjct: 541 SKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVF 600
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG-----RVSHAWE 373
+Y+ +I+G V + L EM I P TY LI K G R+
Sbjct: 601 TYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMS 660
Query: 374 LVDDVIFIFNVWMSYA------KAIKLTRQLL 399
L D++ V YA KA L +Q++
Sbjct: 661 LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMI 692
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 166/358 (46%), Gaps = 7/358 (1%)
Query: 14 SIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIF 73
+ NA+ V N++ +P + +N ++ + + + +++ G P++
Sbjct: 439 EMENAEKEV---NKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVV 495
Query: 74 TLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHV 133
+ LINC C +++ A V + RG P + L+ G C G+++ A +F +
Sbjct: 496 SYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEM 555
Query: 134 VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLV 193
+ +G L+ VTY LI+GL G+ A L+ +I + +KPDV Y +I + V
Sbjct: 556 LKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNV 615
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
LY EM + P + TY+ LI C ++ +L EM ++ PD +N +
Sbjct: 616 QRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEM---SLKPDLLVYNGV 671
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
+ G++++A + M+++ + D TYNSL+ G V ++ + + + + M R +
Sbjct: 672 LHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREM 731
Query: 314 APNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
P +Y+I++ G C+ K A EM K + D + L+ GL + R A
Sbjct: 732 EPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEA 789
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 163/328 (49%), Gaps = 4/328 (1%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D I + P ++ + ++ L K A + ++ G+SP + +L
Sbjct: 476 DKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNML 535
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ C++ +I AF ++LK+G + +T+ TL+ GL + G++ A + +G
Sbjct: 536 IDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL 595
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ D TY LI+G G + + L +++ +KP ++ Y ++I S C + +
Sbjct: 596 KPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTER 654
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L+ EM + PD+ YN +++ + + +++A L +M+ K+I D T+N L+
Sbjct: 655 LFGEMSLK---PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQL 711
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
K G + E ++++ M + ++P+ TYN ++ G+C V + A + M ++G +V
Sbjct: 712 KVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVC 771
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCK 346
+ +++GL + + EA +++EM+ +
Sbjct: 772 IGNELVSGLKEEWRSKEAEIVISEMNGR 799
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 91/190 (47%)
Query: 189 KDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAY 248
+ K++S+A +L+ + + P + L+ Q + + ++ + P +
Sbjct: 121 ESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKF 180
Query: 249 TFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM 308
+ + A K +V + + M + P + YN L+DG C +N A+ +F+ M
Sbjct: 181 MYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEM 240
Query: 309 PQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRV 368
R + P++ +Y+ +I+G CK +++ + M +I P +T+++L+ GL K+G V
Sbjct: 241 LARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMV 300
Query: 369 SHAWELVDDV 378
A ++ ++
Sbjct: 301 EDAENVLKEM 310
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 58/132 (43%)
Query: 248 YTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNS 307
+++ +L L + + EA + + +G+ P + L+D + ++F +
Sbjct: 110 FSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLN 169
Query: 308 MPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGR 367
+ + P+ Y I K V + L L M I P Y+ LIDGLCK R
Sbjct: 170 ILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKR 229
Query: 368 VSHAWELVDDVI 379
++ A +L D+++
Sbjct: 230 MNDAEQLFDEML 241
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 190/397 (47%), Gaps = 32/397 (8%)
Query: 15 IRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFT 74
+R D+A+ F + P N ILT L ++ A + I +++T
Sbjct: 168 LRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYT 227
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
I+IN C + ++ A L + G +P +T+ TL++G L G+++ A +
Sbjct: 228 FNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMK 287
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQI-------------------------- 168
++GF+ D TY +++ +C G+ L+ M++I
Sbjct: 288 SKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAF 347
Query: 169 --QGQLVK----PDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGF 222
+ ++VK P Y +IH + + A L E+ + ++ D TYN LI G+
Sbjct: 348 AYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGY 407
Query: 223 CIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDI 282
C K+A L DEM+T I P +T+ L+ L ++ +EA + ++ +G+KPD+
Sbjct: 408 CQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDL 467
Query: 283 ITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAE 342
+ N+LMDG+C + +++A + M I P+ +Y+ ++ GLC K +EA L+ E
Sbjct: 468 VMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGE 527
Query: 343 MDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
M + I PD ++Y++LI G K G HA+ + D+++
Sbjct: 528 MKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEML 564
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 172/328 (52%), Gaps = 3/328 (0%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P + +N IL+ M + A + ++ G+ PD + ILI N + AF+
Sbjct: 293 PDMQTYNPILSW---MCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAY 349
Query: 95 LAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCK 154
+++K+G P T+ TL+ GL + +++ A + +G LD VTY ILING C+
Sbjct: 350 RDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQ 409
Query: 155 MGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFT 214
G + A L ++ ++P YT +I+ C+ +A L+ +++ + + PD+
Sbjct: 410 HGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVM 469
Query: 215 YNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMM 274
N L+ G C + + A LL EM +I+PD T+N L+ L EG +EA+ ++ M
Sbjct: 470 MNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMK 529
Query: 275 KQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVD 334
++G+KPD I+YN+L+ GY + A + + M G P + +Y+ ++ GL K ++ +
Sbjct: 530 RRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGE 589
Query: 335 EALNLLAEMDCKNIIPDTVTYSSLIDGL 362
A LL EM + I+P+ ++ S+I+ +
Sbjct: 590 LAEELLREMKSEGIVPNDSSFCSVIEAM 617
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 176/344 (51%), Gaps = 3/344 (0%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P I+ +N ++ A + ++ G PD+ T +++ CN+ + A V
Sbjct: 258 PTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEV 314
Query: 95 LAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCK 154
L ++ + G PD++++ L++G NG ++ A + D +V QG TY LI+GL
Sbjct: 315 LREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFM 374
Query: 155 MGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFT 214
+ AA L+R+I+ + + D Y I+I+ +C+ A+ L+ EM+ + P FT
Sbjct: 375 ENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFT 434
Query: 215 YNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMM 274
Y +LIY C ++ +EA +L +++V K + PD N L+D GN+ A ++L M
Sbjct: 435 YTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMD 494
Query: 275 KQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVD 334
+ PD +TYN LM G C + +A+++ M +RGI P+ SY+ +I+G K
Sbjct: 495 MMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTK 554
Query: 335 EALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
A + EM P +TY++L+ GL K+ A EL+ ++
Sbjct: 555 HAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREM 598
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 151/311 (48%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N A + + + P + +N ++ A + ++ G+ P +T
Sbjct: 307 NEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYN 366
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
LI+ + +I +A ++ +I ++G D++T+ L+ G C +G + A HD ++
Sbjct: 367 TLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTD 426
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G + Q TY LI LC+ +TR A +L ++ G+ +KPD+ M ++ C + A
Sbjct: 427 GIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRA 486
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
++L EM + PD TYN L+ G C + +EA +L+ EM + I PD ++N L+
Sbjct: 487 FSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISG 546
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
K+G+ K A V M+ G P ++TYN+L+ G E A+++ M GI PN
Sbjct: 547 YSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPN 606
Query: 317 VHSYSIMINGL 327
S+ +I +
Sbjct: 607 DSSFCSVIEAM 617
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 189/398 (47%), Gaps = 37/398 (9%)
Query: 14 SIRNA-DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDI 72
SIRN D+ V +RL T I F+ ++ +++ AI + + G P
Sbjct: 135 SIRNLFDELVLAHDRL----ETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKT 190
Query: 73 FTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDH 132
T ++ +I +A+ A + + + + TF ++ LC G+++ A F
Sbjct: 191 ETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGI 250
Query: 133 VVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKL 192
+ G + VTY L+ G G+ A ++ +++ + +PD++ Y I+ C +
Sbjct: 251 MEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR 310
Query: 193 VSD---------------AYNLY-----------------SEMLARRVLPDVFTYNALIY 220
S+ +YN+ EM+ + ++P +TYN LI+
Sbjct: 311 ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIH 370
Query: 221 GFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKP 280
G + ++++ A L+ E+ K I D+ T+NIL++ + G+ K+A + MM G++P
Sbjct: 371 GLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQP 430
Query: 281 DIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLL 340
TY SL+ C ++ +A ++F + +G+ P++ + +++G C +D A +LL
Sbjct: 431 TQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLL 490
Query: 341 AEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
EMD +I PD VTY+ L+ GLC G+ A EL+ ++
Sbjct: 491 KEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEM 528
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 151/303 (49%), Gaps = 3/303 (0%)
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
+L+ C C + A + ++G+ P T T ++ L +++ A F+ +
Sbjct: 160 LLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRM 219
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
+ + T+ I+IN LCK G+ + A + ++ +KP + Y ++ F + A
Sbjct: 220 EIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGA 279
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
+ SEM ++ PD+ TYN ++ C + A+++L EM + PD+ ++NIL+
Sbjct: 280 RLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRG 336
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
G+++ A M+KQG+ P TYN+L+ G + +++ A+ + + ++GI +
Sbjct: 337 CSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLD 396
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
+Y+I+ING C+ +A L EM I P TY+SLI LC+ + A EL +
Sbjct: 397 SVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFE 456
Query: 377 DVI 379
V+
Sbjct: 457 KVV 459
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 136/273 (49%), Gaps = 3/273 (1%)
Query: 107 TITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMR 166
TI F L++ C V A++ + +GF T ++ L ++ + A
Sbjct: 155 TILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYA 214
Query: 167 QIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVS 226
+ +K +V + I+I+ CK+ + A M + P + TYN L+ GF +
Sbjct: 215 DMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRG 274
Query: 227 QLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYN 286
+++ A ++ EM +K PD T+N ++ + EG E VL M + G+ PD ++YN
Sbjct: 275 RIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYN 331
Query: 287 SLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCK 346
L+ G ++ A + M ++G+ P ++Y+ +I+GL K++ A L+ E+ K
Sbjct: 332 ILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 391
Query: 347 NIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
I+ D+VTY+ LI+G C+ G A+ L D+++
Sbjct: 392 GIVLDSVTYNILINGYCQHGDAKKAFALHDEMM 424
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 135/272 (49%), Gaps = 23/272 (8%)
Query: 126 ALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQI----------------- 168
A F +H+ +RLD T + I + K+ + QL++++
Sbjct: 88 AFNFVNHI--DLYRLDFQTQCLAIAVISKLSSPKPVTQLLKEVVTSRKNSIRNLFDELVL 145
Query: 169 -QGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQ 227
+L ++ +++ C+ ++V +A + M + P T N ++ +++
Sbjct: 146 AHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNR 205
Query: 228 LKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNS 287
++ A +M I + YTFNI+++ L KEG +K+AK L +M G+KP I+TYN+
Sbjct: 206 IENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNT 265
Query: 288 LMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKN 347
L+ G+ L + A+ I + M +G P++ +Y+ +++ +C + E L + E+
Sbjct: 266 LVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEI---G 322
Query: 348 IIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
++PD+V+Y+ LI G +G + A+ D+++
Sbjct: 323 LVPDSVSYNILIRGCSNNGDLEMAFAYRDEMV 354
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 181/355 (50%), Gaps = 6/355 (1%)
Query: 18 ADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTI 77
A+ AV +F R+ P + +N +L +L+ + + G P++FT +
Sbjct: 127 AERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNV 186
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
L+ C ++ A +L ++ +G PD +++TT++ +C G V+ + +A+
Sbjct: 187 LLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE-----LAER 241
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
F Y LINGLCK + A +LMR++ + + P+V Y+ +I+ C + A+
Sbjct: 242 FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAF 301
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTK-NIHPDAYTFNILVDA 256
+ ++ML R P+++T ++L+ G + +A L ++M+ + P+ +N LV
Sbjct: 302 SFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQG 361
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
GN+ +A +V + M + G P+I TY SL++G+ ++ A I+N M G PN
Sbjct: 362 FCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPN 421
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
V Y+ M+ LC+ K EA +L+ M +N P T+++ I GLC +GR+ A
Sbjct: 422 VVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWA 476
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 171/345 (49%), Gaps = 4/345 (1%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P + +N ++ L K Y A L ++ GISP++ + + LIN CN QI AFS
Sbjct: 244 PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSF 303
Query: 95 LAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL--DQVTYRILINGL 152
L ++LKRG P+ T ++L+KG L G AL + ++ +GF L + V Y L+ G
Sbjct: 304 LTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI-RGFGLQPNVVAYNTLVQGF 362
Query: 153 CKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDV 212
C G A+ + ++ P++ Y +I+ F K + A ++++ML P+V
Sbjct: 363 CSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNV 422
Query: 213 FTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAV 272
Y ++ C S+ KEA L++ M +N P TFN + L G + A+ V
Sbjct: 423 VVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482
Query: 273 MMKQG-VKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTK 331
M +Q P+I+TYN L+DG + + +A + + RG+ + +Y+ +++G C
Sbjct: 483 MEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAG 542
Query: 332 KVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
AL L+ +M PD +T + +I CK G+ A +++D
Sbjct: 543 LPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLD 587
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 183/363 (50%), Gaps = 7/363 (1%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A + + P + + +++S+ ++ L+ + + P + L
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSVYNAL 252
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
IN C + AF ++ +++++G P+ I+++TL+ LC +GQ++ A F ++ +G
Sbjct: 253 INGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGC 312
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQ-IQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
+ T L+ G G T AL L Q I+G ++P+V Y ++ FC + A
Sbjct: 313 HPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAV 372
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
+++S M P++ TY +LI GF L A + ++M+T P+ + +V+AL
Sbjct: 373 SVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEAL 432
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG-IAPN 316
+ KEA++++ +M K+ P + T+N+ + G C ++ A+ +F M Q+ PN
Sbjct: 433 CRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPN 492
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
+ +Y+ +++GL K +++EA L E+ + + + TY++L+ G C +G A +LV
Sbjct: 493 IVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVG 552
Query: 377 DVI 379
++
Sbjct: 553 KMM 555
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 165/322 (51%), Gaps = 6/322 (1%)
Query: 56 AISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMK 115
A+ + +++ G P + +++ + +I + V + + G+ P+ T+ L+K
Sbjct: 130 AVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLK 189
Query: 116 GLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKP 175
LC N +V A + + +G D V+Y +I+ +C++G + +L + + P
Sbjct: 190 ALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----P 244
Query: 176 DVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLL 235
V +Y +I+ CK+ A+ L EM+ + + P+V +Y+ LI C Q++ A L
Sbjct: 245 VVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFL 304
Query: 236 DEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQ-GVKPDIITYNSLMDGYCL 294
+M+ + HP+ YT + LV G +A + M++ G++P+++ YN+L+ G+C
Sbjct: 305 TQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCS 364
Query: 295 VSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVT 354
+ KA +F+ M + G +PN+ +Y +ING K +D A+ + +M P+ V
Sbjct: 365 HGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVV 424
Query: 355 YSSLIDGLCKSGRVSHAWELVD 376
Y+++++ LC+ + A L++
Sbjct: 425 YTNMVEALCRHSKFKEAESLIE 446
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 145/282 (51%), Gaps = 5/282 (1%)
Query: 103 YRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAAL 162
++ +TF +++ L ++GQV + + QGF + + +I+ ++G A+
Sbjct: 72 FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV 131
Query: 163 QLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGF 222
++ +I+ P V++Y ++ + + + Y +Y +M P+VFTYN L+
Sbjct: 132 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 191
Query: 223 CIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDI 282
C +++ A KLL EM K PDA ++ ++ ++ + G VKE + + + +P +
Sbjct: 192 CKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE-----LAERFEPVV 246
Query: 283 ITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAE 342
YN+L++G C + A ++ M ++GI+PNV SYS +IN LC + +++ A + L +
Sbjct: 247 SVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ 306
Query: 343 MDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVIFIFNV 384
M + P+ T SSL+ G G A +L + +I F +
Sbjct: 307 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGL 348
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 182/416 (43%), Gaps = 46/416 (11%)
Query: 2 SSFLRLKNSLPPSIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSH 61
S L+++ L P + N + V N LL SP I+ ++ L + P A+
Sbjct: 8 SLLLKVQKPLIPFVLNTNLNV---NHLLTESPNHAEIKELDVVKRLRQESCVPLALHFFK 64
Query: 62 QLDFTGISPDI-FTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLN 120
+ + + T ++I Q+ S +L ++ +G+ F +++
Sbjct: 65 SIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQV 124
Query: 121 GQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLM--RQIQGQLVKPDVE 178
G + A++ + G Y +++ L +G+ R + M R ++ +P+V
Sbjct: 125 GLAERAVEMFYRIKEFGCDPSVKIYNHVLDTL--LGENRIQMIYMVYRDMKRDGFEPNVF 182
Query: 179 MYTIIIHSFCKDKLVSDAYNLYSEM------------------------------LARRV 208
Y +++ + CK+ V A L EM LA R
Sbjct: 183 TYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF 242
Query: 209 LPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKT 268
P V YNALI G C K A +L+ EMV K I P+ +++ L++ L G ++ A +
Sbjct: 243 EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFS 302
Query: 269 VLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQR-GIAPNVHSYSIMINGL 327
L M+K+G P+I T +SL+ G L A D++N M + G+ PNV +Y+ ++ G
Sbjct: 303 FLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGF 362
Query: 328 CKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVIFIFN 383
C + +A+++ + M+ P+ TY SLI+G K G +D ++I+N
Sbjct: 363 CSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGS-------LDGAVYIWN 411
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 134/293 (45%), Gaps = 6/293 (2%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N AVS+F+ + + +P I + ++ K A+ + +++ +G P++ T
Sbjct: 367 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYT 426
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
++ C ++ A S++ + K P TF +KGLC G++ A + + Q
Sbjct: 427 NMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ-MEQ 485
Query: 137 GFRL--DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
R + VTY L++GL K + A L R+I + V+ Y ++H C L
Sbjct: 486 QHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPG 545
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLD--EMVTKNIHPDAYTFNI 252
A L +M+ PD T N +I +C + + A ++LD + PD ++
Sbjct: 546 IALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTN 605
Query: 253 LVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIF 305
++ L + ++ +L M+ G+ P I T++ L++ + ++ ++ +A D F
Sbjct: 606 VIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF-ILDDIVRAHDQF 657
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 10/197 (5%)
Query: 213 FTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAV 272
T+ +I + Q+ LL +M + H F ++ + G + A +
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 273 MMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKK 332
+ + G P + YN ++D + + ++ M + G PNV +Y++++ LCK K
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 333 VDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDD---VIFIFNVWMS-- 387
VD A LL EM K PD V+Y+++I +C+ G V EL + V+ ++N ++
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGL 256
Query: 388 -----YAKAIKLTRQLL 399
Y A +L R+++
Sbjct: 257 CKEHDYKGAFELMREMV 273
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 177/374 (47%), Gaps = 35/374 (9%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P I+ +N I+ K+ A + +L G P + T +IN +C + ++ +
Sbjct: 238 PNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRL 297
Query: 95 LAKILKRGYR-----------------------------------PDTITFTTLMKGLCL 119
L+++ +RG R PD T+ L+ LC
Sbjct: 298 LSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCK 357
Query: 120 NGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEM 179
G+ + A+ F D +G + ++Y LI CK + A +L+ Q+ + KPD+
Sbjct: 358 EGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVT 417
Query: 180 YTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMV 239
Y I+IH + DA N+ +++ R V PD YN L+ G C + A L EM+
Sbjct: 418 YGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEML 477
Query: 240 TKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVN 299
+NI PDAY + L+D + G+ EA+ V ++ +++GVK D++ +N+++ G+C ++
Sbjct: 478 DRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLD 537
Query: 300 KAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLI 359
+A N M + + P+ +YS +I+G K + + A+ + M+ P+ VTY+SLI
Sbjct: 538 EALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLI 597
Query: 360 DGLCKSGRVSHAWE 373
+G C G A E
Sbjct: 598 NGFCCQGDFKMAEE 611
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 173/337 (51%), Gaps = 3/337 (0%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P + +N ++ L K A+ + G+ P+ + LI YC + A +
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 95 LAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCK 154
L ++ +RG +PD +T+ L+ GL ++G + A+ ++ +G D Y +L++GLCK
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 155 MGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFT 214
G+ A L ++ + + PD +Y +I F + +A ++S + + V DV
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 215 YNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMM 274
+NA+I GFC L EA ++ M +++ PD +T++ ++D K+ ++ A + M
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYME 582
Query: 275 KQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCK-TKKV 333
K KP+++TY SL++G+C + A++ F M R + PNV +Y+ +I L K + +
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTL 642
Query: 334 DEALNLLAEMDCKNIIPDTVTYSSLIDGLCK--SGRV 368
++A+ M +P+ VT++ L+ G K SG+V
Sbjct: 643 EKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKV 679
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 175/352 (49%), Gaps = 1/352 (0%)
Query: 21 AVSIFNRLLRM-SPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
AV I++ ++ + P +I N +L+ LVK + A + ++ G S D ++ IL+
Sbjct: 153 AVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILV 212
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
CN+ ++ ++ +G P+ + + T++ G C G ++ A + +GF
Sbjct: 213 KGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFM 272
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
T+ +ING CK G A+ +L+ +++ + ++ V II + + D
Sbjct: 273 PTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAES 332
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
++A PDV TYN LI C + + A LDE K + P+ ++ L+ A K
Sbjct: 333 IGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCK 392
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
A +L M ++G KPDI+TY L+ G + ++ A ++ + RG++P+
Sbjct: 393 SKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAI 452
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
Y+++++GLCKT + A L +EM +NI+PD Y++LIDG +SG A
Sbjct: 453 YNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEA 504
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 173/367 (47%), Gaps = 19/367 (5%)
Query: 28 LLRMSP---TPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCN 84
LL+M+ P I+ + ++ LV H A+++ +L G+SPD +L++ C
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 85 QAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVT 144
+ A + +++L R PD + TL+ G +G A + V +G ++D V
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 145 YRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEML 204
+ +I G C+ G AL M ++ + + PD Y+ II + K + ++ A ++ M
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYME 582
Query: 205 ARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGN-V 263
+ P+V TY +LI GFC K A + EM +++ P+ T+ L+ +L KE + +
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTL 642
Query: 264 KEAKTVLAVMMKQGVKPDIITYNSLMDGYC------LVSEVNKA--------KDIFNSMP 309
++A +MM P+ +T+N L+ G+ +++E + + + F+ M
Sbjct: 643 EKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMK 702
Query: 310 QRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVS 369
G + + +Y+ + LC V A +M K PD V++++++ G C G S
Sbjct: 703 SDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGN-S 761
Query: 370 HAWELVD 376
W +D
Sbjct: 762 KQWRNMD 768
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/308 (31%), Positives = 170/308 (55%)
Query: 67 GISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA 126
GI PDI T + L+N +C I A V ++ K G + D + T L+ LC N V A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 127 LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS 186
L+ + +G + VTY LI GLCK G+ A + + ++ + + P+V ++ +I +
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
+ K +S ++Y M+ + P+VFTY++LIYG C+ +++ EA K+LD M++K P+
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 187
Query: 247 AYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFN 306
T++ L + K V + +L M ++GV + ++ N+L+ GY +++ A +F
Sbjct: 188 VVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFG 247
Query: 307 SMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
M G+ PN+ SY+I++ GL +V++AL+ M D +TY+ +I G+CK+
Sbjct: 248 YMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKAC 307
Query: 367 RVSHAWEL 374
V A++L
Sbjct: 308 MVKEAYDL 315
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 153/275 (55%)
Query: 97 KILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMG 156
K++K G PD +T ++L+ G CL+ ++ A+ + G + D V ILI+ LCK
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 157 QTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYN 216
AL+++++++ + + P+V Y+ +I CK ++DA EM ++++ P+V T++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 217 ALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQ 276
ALI + +L + + M+ +I P+ +T++ L+ L V EA +L +M+ +
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 277 GVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEA 336
G P+++TY++L +G+ S V+ + + MPQRG+A N S + +I G + K+D A
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 337 LNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
L + M +IP+ +Y+ ++ GL +G V A
Sbjct: 243 LGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKA 277
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 121/242 (50%), Gaps = 35/242 (14%)
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G D VT L+NG C + A+ + Q++ +K DV + TI+I + CK++LV
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLV--- 64
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
+P A ++L M + I P+ T++ L+
Sbjct: 65 ------------VP--------------------ALEVLKRMKDRGISPNVVTYSSLITG 92
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
L K G + +A+ L M + + P++IT+++L+D Y +++K ++ M Q I PN
Sbjct: 93 LCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPN 152
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
V +YS +I GLC +VDEA+ +L M K P+ VTYS+L +G KS RV +L+D
Sbjct: 153 VFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLD 212
Query: 377 DV 378
D+
Sbjct: 213 DM 214
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 154/345 (44%), Gaps = 35/345 (10%)
Query: 27 RLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQA 86
+++++ P I+ + ++ A+ ++ Q++ GI D+ TILI+ C
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 87 QITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA-LQFHD-------------- 131
+ A VL ++ RG P+ +T+++L+ GLC +G++ A + H+
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 132 ---HVVAQGFRLDQV-----------------TYRILINGLCKMGQTRAALQLMRQIQGQ 171
A+ +L +V TY LI GLC + A++++ + +
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 172 LVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEA 231
P+V Y+ + + F K V D L +M R V + + N LI G+ ++ A
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 232 TKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDG 291
+ M + + P+ ++NI++ L G V++A + M K DIITY ++ G
Sbjct: 243 LGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHG 302
Query: 292 YCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEA 336
C V +A D+F + + + P+ +Y+IMI L + EA
Sbjct: 303 MCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA 347
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 96/178 (53%), Gaps = 6/178 (3%)
Query: 202 EMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEG 261
+M+ + PD+ T ++L+ GFC+ + +K+A + +M I D IL+D L K
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 262 NVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYS 321
V A VL M +G+ P+++TY+SL+ G C + A+ + M + I PNV ++S
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 322 IMINGLCKT---KKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
+I+ K KVD ++ +M +I P+ TYSSLI GLC RV A +++D
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQM---SIDPNVFTYSSLIYGLCMHNRVDEAIKMLD 177
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 86/178 (48%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D+A+ + + ++ TP ++ ++ + K I L + G++ + + L
Sbjct: 170 DEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTL 229
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I Y +I A V + G P+ ++ ++ GL NG+V+ AL +H+
Sbjct: 230 IKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRN 289
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
LD +TY I+I+G+CK + A L +++ + V+PD + YTI+I + + ++A
Sbjct: 290 DLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA 347
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 174 bits (441), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 184/354 (51%), Gaps = 2/354 (0%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A SIFN L+ P +I + ++T+L + KH+ + +SL +++ G+ PD +I
Sbjct: 337 EAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAII 396
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA-QGF 138
N + A + K+ + G +P TF TL+KG G+++ + + D ++ +
Sbjct: 397 NASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEML 456
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ + T IL+ C + A ++ ++Q VKPDV + + ++ + A +
Sbjct: 457 QPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAED 516
Query: 199 LY-SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
+ ML +V P+V T ++ G+C +++EA + M +HP+ + FN L+
Sbjct: 517 MIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGF 576
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
++ V+ +M + GVKPD++T+++LM+ + V ++ + ++I+ M + GI P++
Sbjct: 577 LNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDI 636
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
H++SI+ G + + ++A +L +M + P+ V Y+ +I G C +G + A
Sbjct: 637 HAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKA 690
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 172/351 (49%), Gaps = 9/351 (2%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKM-KHYPTAISLSHQLDFTGISPDIFTL 75
N D A+ IF ++ P FN ++ K+ K ++ L L + P+ T
Sbjct: 404 NLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTC 463
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
IL+ +CNQ +I A++++ K+ G +PD +TF TL K G TA D ++
Sbjct: 464 NILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTA---EDMIIP 520
Query: 136 Q----GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDK 191
+ + + T ++NG C+ G+ AL+ +++ V P++ ++ +I F
Sbjct: 521 RMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIN 580
Query: 192 LVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFN 251
+ + M V PDV T++ L+ + V +K ++ +M+ I PD + F+
Sbjct: 581 DMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFS 640
Query: 252 ILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQ- 310
IL + G ++A+ +L M K GV+P+++ Y ++ G+C E+ KA ++ M
Sbjct: 641 ILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGI 700
Query: 311 RGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDG 361
G++PN+ +Y +I G + K+ +A LL +M+ KN++P T + DG
Sbjct: 701 VGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADG 751
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 137/273 (50%), Gaps = 2/273 (0%)
Query: 106 DTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLM 165
D + T LM GL G+ Q A + ++ +G + +TY L+ L + + L L+
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 166 RQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIV 225
+++ +KPD ++ II++ + + A ++ +M P T+N LI G+ +
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 226 SQLKEATKLLDEMVTKN-IHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIIT 284
+L+E+++LLD M+ + P+ T NILV A + ++EA ++ M GVKPD++T
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 285 YNSLMDGYCLVSEVNKAKD-IFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM 343
+N+L Y + A+D I M + PNV + ++NG C+ K++EAL M
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Query: 344 DCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
+ P+ ++SLI G + E+VD
Sbjct: 558 KELGVHPNLFVFNSLIKGFLNINDMDGVGEVVD 590
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 153/314 (48%), Gaps = 8/314 (2%)
Query: 71 DIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFH 130
D+ + T L+N + + A S+ +++ G++P IT+TTL+ L + L
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 131 DHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKD 190
V G + D + + +IN + G A+++ +++ KP + +I + K
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 191 KLVSDAYNLYSEMLARRVL-PDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYT 249
+ ++ L ML +L P+ T N L+ +C +++EA ++ +M + + PD T
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 250 FNILVDALGKEGNVKEAKT-VLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM 308
FN L A + G+ A+ ++ M+ VKP++ T ++++GYC ++ +A F M
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Query: 309 PQRGIAPNVHSYSIMINGLCKTKKVD---EALNLLAEMDCKNIIPDTVTYSSLIDGLCKS 365
+ G+ PN+ ++ +I G +D E ++L+ E K PD VT+S+L++
Sbjct: 558 KELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVK---PDVVTFSTLMNAWSSV 614
Query: 366 GRVSHAWELVDDVI 379
G + E+ D++
Sbjct: 615 GDMKRCEEIYTDML 628
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 102/230 (44%), Gaps = 14/230 (6%)
Query: 7 LKNSLPPSIRNA-------------DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHY 53
L N + P++R ++A+ F R+ + P + FN ++ + +
Sbjct: 523 LHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDM 582
Query: 54 PTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTL 113
+ ++ G+ PD+ T + L+N + + + + +L+ G PD F+ L
Sbjct: 583 DGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSIL 642
Query: 114 MKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQL- 172
KG G+ + A Q + + G R + V Y +I+G C G+ + A+Q+ +++ G +
Sbjct: 643 AKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVG 702
Query: 173 VKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGF 222
+ P++ Y +I F + K A L +M + V+P T + G+
Sbjct: 703 LSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGW 752
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 166/349 (47%), Gaps = 36/349 (10%)
Query: 67 GISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA 126
G PD T T+++ C + A K++ G++P+ I FT+L+ GLC G ++ A
Sbjct: 247 GFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQA 306
Query: 127 LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQL-MRQIQGQLVKPDVEMYTIIIH 185
+ + +V G++ + T+ LI+GLCK G T A +L ++ ++ KP+V YT +I
Sbjct: 307 FEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIG 366
Query: 186 SFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHP 245
+CK+ ++ A L+S M + + P+V TY LI G C A +L++ M + P
Sbjct: 367 GYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMP 426
Query: 246 DAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIF 305
+ YT+N +D+L K+ EA +L G++ D +TY L+ C +++N+A F
Sbjct: 427 NIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFF 486
Query: 306 NSMPQRG-----------------------------------IAPNVHSYSIMINGLCKT 330
M + G + P +Y+ MI+ CK
Sbjct: 487 CRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKE 546
Query: 331 KKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+D AL M +PD+ TY SLI GLCK V A +L + +I
Sbjct: 547 GDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMI 595
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 169/359 (47%), Gaps = 1/359 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+ A+ F +++ + P +I F ++ L K A + ++ G P+++T T L
Sbjct: 269 NRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTAL 328
Query: 79 INCYCNQAQITSAFSVLAKILKRG-YRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
I+ C + AF + K+++ Y+P+ T+T+++ G C ++ A + QG
Sbjct: 329 IDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQG 388
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
+ TY LING CK G A +LM + + P++ Y I S CK +AY
Sbjct: 389 LFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAY 448
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
L ++ + + D TY LI C + + +A M D NIL+ A
Sbjct: 449 ELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAF 508
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
++ +KE++ + +++ G+ P TY S++ YC +++ A F++M + G P+
Sbjct: 509 CRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDS 568
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
+Y +I+GLCK VDEA L M + + P VT +L CK ++A L++
Sbjct: 569 FTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLE 627
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 133/286 (46%), Gaps = 40/286 (13%)
Query: 146 RILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLA 205
R ++ ++G+ A+ ++ +Q Q + P ++ + L+ A N++ EM
Sbjct: 151 RCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSV 210
Query: 206 RRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKE 265
R V+PD +Y ++ G +++EA + L M+ + PD T +++ AL + G V
Sbjct: 211 RGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNR 270
Query: 266 AKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG------------- 312
A M+ G KP++I + SL+DG C + +A ++ M + G
Sbjct: 271 AIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALID 330
Query: 313 -----------------------IAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNII 349
PNVH+Y+ MI G CK K++ A L + M + +
Sbjct: 331 GLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLF 390
Query: 350 PDTVTYSSLIDGLCKSGRVSHAWELVD---DVIFIFNVWMSYAKAI 392
P+ TY++LI+G CK+G A+EL++ D F+ N++ +Y AI
Sbjct: 391 PNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIY-TYNAAI 435
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 126/293 (43%), Gaps = 3/293 (1%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+ A +F+R+ P + + ++ K + A L + + G P+I+T
Sbjct: 375 NRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAA 434
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ C +++ A+ +L K G D +T+T L++ C + AL F + GF
Sbjct: 435 IDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGF 494
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D ILI C+ + + + +L + + + P E YT +I +CK+ + A
Sbjct: 495 EADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALK 554
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
+ M +PD FTY +LI G C S + EA KL + M+ + + P T L
Sbjct: 555 YFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYC 614
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQR 311
K + A +L + K K I T +L+ C +V A F + ++
Sbjct: 615 KRNDSANAMILLEPLDK---KLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEK 664
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 117/246 (47%), Gaps = 15/246 (6%)
Query: 129 FHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFC 188
F+ V + FR Y + + L G + A ++MR ++ +F
Sbjct: 114 FYWAVGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMR---------------CMLRNFS 158
Query: 189 KDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAY 248
+ +++A + +M + + P T N ++ + ++ A + DEM + + PD+
Sbjct: 159 EIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSS 218
Query: 249 TFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM 308
++ ++V ++G ++EA L M+++G PD T ++ C VN+A F M
Sbjct: 219 SYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKM 278
Query: 309 PQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRV 368
G PN+ +++ +I+GLCK + +A +L EM P+ T+++LIDGLCK G
Sbjct: 279 IDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWT 338
Query: 369 SHAWEL 374
A+ L
Sbjct: 339 EKAFRL 344
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 100/244 (40%), Gaps = 3/244 (1%)
Query: 18 ADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTI 77
A +A + N+ + + ++ K A++ +++ TG D+ I
Sbjct: 444 APEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNI 503
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
LI +C Q ++ + + ++ G P T+T+++ C G + AL++ ++ G
Sbjct: 504 LIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHG 563
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
D TY LI+GLCK A +L + + + P + + +CK ++A
Sbjct: 564 CVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAM 623
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
L E L +++ + T L+ C ++ A +++ K+ D T A
Sbjct: 624 ILL-EPLDKKLW--IRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTAC 680
Query: 258 GKEG 261
+ G
Sbjct: 681 SESG 684
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 180/359 (50%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
R +A+ ++ R++ P + ++ ++ L K + + + L +++ G+ P+++T
Sbjct: 202 RFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTF 261
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
TI I +I A+ +L ++ G PD +T+T L+ LC ++ A + + +
Sbjct: 262 TICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKT 321
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
+ D+VTY L++ + Q +++ PDV +TI++ + CK +
Sbjct: 322 GRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGE 381
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
A++ M + +LP++ TYN LI G V +L +A +L M + + P AYT+ + +D
Sbjct: 382 AFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFID 441
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
GK G+ A M +G+ P+I+ N+ + +AK IF + G+ P
Sbjct: 442 YYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVP 501
Query: 316 NVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
+ +Y++M+ K ++DEA+ LL+EM PD + +SLI+ L K+ RV AW++
Sbjct: 502 DSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKM 560
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 173/364 (47%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
R+ D + + + + P + F + L + A + ++D G PD+ T
Sbjct: 237 RDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTY 296
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
T+LI+ C ++ A V K+ ++PD +T+ TL+ N + + QF +
Sbjct: 297 TVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEK 356
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
G D VT+ IL++ LCK G A + ++ Q + P++ Y +I + + D
Sbjct: 357 DGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDD 416
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
A L+ M + V P +TY I + A + ++M TK I P+ N +
Sbjct: 417 ALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY 476
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
+L K G +EAK + + G+ PD +TYN +M Y V E+++A + + M + G P
Sbjct: 477 SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEP 536
Query: 316 NVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
+V + +IN L K +VDEA + M + P VTY++L+ GL K+G++ A EL
Sbjct: 537 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 596
Query: 376 DDVI 379
+ ++
Sbjct: 597 EGMV 600
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 193/396 (48%), Gaps = 15/396 (3%)
Query: 4 FLRLKNSLPPSIRNA--DDAVSIF-NRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLS 60
F+ L LP ++ + +DA I N L + P + + ++ S++ A+S S
Sbjct: 677 FVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFS 736
Query: 61 HQLDFTGISPDIFTLTILINCY-CNQAQITSAFSVLAKILKR-GYRPDTITFTTLMKGLC 118
+L GI D ++ + I Y C ++ A ++ K K G +P T+ L+ GL
Sbjct: 737 ERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLL 796
Query: 119 LNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVE 178
++ A V + G D TY L++ K G+ +L +++ + +
Sbjct: 797 EADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTI 856
Query: 179 MYTIIIHSFCKDKLVSDAYNLYSEMLARRVL-PDVFTYNALIYGFCIVSQLKEATKLLDE 237
+ I+I K V DA +LY ++++ R P TY LI G +L EA +L +
Sbjct: 857 THNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEG 916
Query: 238 MVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSE 297
M+ P+ +NIL++ GK G A + M+K+GV+PD+ TY+ L+D C+V
Sbjct: 917 MLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 976
Query: 298 VNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMD-CKNIIPDTVTYS 356
V++ F + + G+ P+V Y+++INGL K+ +++EAL L EM + I PD TY+
Sbjct: 977 VDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYN 1036
Query: 357 SLIDGLCKSGRVSHAWELVDDV--------IFIFNV 384
SLI L +G V A ++ +++ +F FN
Sbjct: 1037 SLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNA 1072
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 176/358 (49%)
Query: 14 SIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIF 73
+ R D A +F ++ P + + +L + + +++ G PD+
Sbjct: 305 TARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVV 364
Query: 74 TLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHV 133
T TIL++ C AF L + +G P+ T+ TL+ GL ++ AL+ ++
Sbjct: 365 TFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM 424
Query: 134 VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLV 193
+ G + TY + I+ K G + +AL+ +++ + + P++ ++S K
Sbjct: 425 ESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRD 484
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
+A ++ + ++PD TYN ++ + V ++ EA KLL EM+ PD N L
Sbjct: 485 REAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSL 544
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
++ L K V EA + M + +KP ++TYN+L+ G ++ +A ++F M Q+G
Sbjct: 545 INTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGC 604
Query: 314 APNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
PN +++ + + LCK +V AL +L +M +PD TY+++I GL K+G+V A
Sbjct: 605 PPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA 662
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 169/357 (47%), Gaps = 9/357 (2%)
Query: 11 LPPSIR------NADDAVSIFNRLLR-MSPTPPIIEFNKILTSLVKMKHYPTAISLSHQL 63
L P IR N A ++F + + + P + +N ++ L++ A + Q+
Sbjct: 752 LVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQV 811
Query: 64 DFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQV 123
TG PD+ T L++ Y +I F + ++ +TIT ++ GL G V
Sbjct: 812 KSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNV 871
Query: 124 QTALQ-FHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTI 182
AL ++D + + F TY LI+GL K G+ A QL + +P+ +Y I
Sbjct: 872 DDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNI 931
Query: 183 IIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKN 242
+I+ F K A L+ M+ V PD+ TY+ L+ C+V ++ E E+
Sbjct: 932 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
Query: 243 IHPDAYTFNILVDALGKEGNVKEAKTVLAVM-MKQGVKPDIITYNSLMDGYCLVSEVNKA 301
++PD +N++++ LGK ++EA + M +G+ PD+ TYNSL+ + V +A
Sbjct: 992 LNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEA 1051
Query: 302 KDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSL 358
I+N + + G+ PNV +++ +I G + K + A + M P+T TY L
Sbjct: 1052 GKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 154/325 (47%), Gaps = 3/325 (0%)
Query: 50 MKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTIT 109
+K P A+ + F + ++ LI+ T A V +++ G+RP T
Sbjct: 169 LKQAPYALRKMREFGFV---LNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQT 225
Query: 110 FTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQ 169
+++LM GL + + + + G + + T+ I I L + G+ A ++++++
Sbjct: 226 YSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMD 285
Query: 170 GQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLK 229
+ PDV YT++I + C + + A ++ +M R PD TY L+ F L
Sbjct: 286 DEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLD 345
Query: 230 EATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLM 289
+ EM PD TF ILVDAL K GN EA L VM QG+ P++ TYN+L+
Sbjct: 346 SVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLI 405
Query: 290 DGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNII 349
G V ++ A ++F +M G+ P ++Y + I+ K+ AL +M K I
Sbjct: 406 CGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIA 465
Query: 350 PDTVTYSSLIDGLCKSGRVSHAWEL 374
P+ V ++ + L K+GR A ++
Sbjct: 466 PNIVACNASLYSLAKAGRDREAKQI 490
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 183/437 (41%), Gaps = 74/437 (16%)
Query: 15 IRNADDAVSIFNRL--LRMSPT---------------------------------PPIIE 39
+ DDA+ +F + L + PT P I+
Sbjct: 411 VHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVA 470
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
N L SL K A + + L G+ PD T +++ CY +I A +L++++
Sbjct: 471 CNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMM 530
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
+ G PD I +L+ L +V A + + + VTY L+ GL K G+ +
Sbjct: 531 ENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQ 590
Query: 160 AALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
A++L + + P+ + + CK+ V+ A + +M+ +PDVFTYN +I
Sbjct: 591 EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 650
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVL--------- 270
+G Q+KEA +M K ++PD T L+ + K +++A ++
Sbjct: 651 FGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCAD 709
Query: 271 ------------AVMMKQGVKPDIITYNSLM------DG----------YCLVSEVNKAK 302
+++ + G+ + L+ DG C + V+ A+
Sbjct: 710 QPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGAR 769
Query: 303 DIFNSMPQR-GIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDG 361
+F + G+ P + +Y+++I GL + ++ A ++ ++ IPD TY+ L+D
Sbjct: 770 TLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDA 829
Query: 362 LCKSGRVSHAWELVDDV 378
KSG++ +EL ++
Sbjct: 830 YGKSGKIDELFELYKEM 846
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 115/250 (46%), Gaps = 1/250 (0%)
Query: 128 QFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQL-VKPDVEMYTIIIHS 186
F ++ + + D + + GL T ++ + + G L + E ++ +
Sbjct: 68 DFSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEA 127
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
D + + ++ M R + D TY + + LK+A L +M +
Sbjct: 128 LRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLN 187
Query: 247 AYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFN 306
AY++N L+ L K EA V M+ +G +P + TY+SLM G +++ +
Sbjct: 188 AYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLK 247
Query: 307 SMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
M G+ PNV++++I I L + K++EA +L MD + PD VTY+ LID LC +
Sbjct: 248 EMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTAR 307
Query: 367 RVSHAWELVD 376
++ A E+ +
Sbjct: 308 KLDCAKEVFE 317
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 186/374 (49%), Gaps = 10/374 (2%)
Query: 7 LKNSLPPSIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFT 66
L NSL R D IF +++++ I +N ++ + K A L +++
Sbjct: 174 LLNSLVKQ-RLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEK 232
Query: 67 GISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA 126
G+ PDIFT LI+ YC ++ A SV ++ + G P+ +T+ + + G G+++ A
Sbjct: 233 GVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREA 292
Query: 127 L----QFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTI 182
+ D V A + VTY LI+G C+M AL+L ++ + P V Y
Sbjct: 293 TRLFREIKDDVTA-----NHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNS 347
Query: 183 IIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKN 242
I+ C+D + +A L +EM +++ PD T N LI +C + + A K+ +M+
Sbjct: 348 ILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESG 407
Query: 243 IHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAK 302
+ D Y++ L+ K ++ AK L M+++G P TY+ L+DG+ ++ ++
Sbjct: 408 LKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEIT 467
Query: 303 DIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGL 362
+ +RG+ +V Y +I +CK ++VD A L M+ K ++ D+V ++++
Sbjct: 468 KLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAY 527
Query: 363 CKSGRVSHAWELVD 376
++G+V+ A L D
Sbjct: 528 WRTGKVTEASALFD 541
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 175/353 (49%), Gaps = 1/353 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+D++ +F ++ P + +L SLVK + T + ++ G+ +I +L
Sbjct: 150 NDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVL 209
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
++ A +L+++ ++G PD T+ TL+ C AL D + G
Sbjct: 210 VHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGV 269
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ VTY I+G + G+ R A +L R+I+ + V YT +I +C+ + +A
Sbjct: 270 APNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHV-TYTTLIDGYCRMNDIDEALR 328
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L M +R P V TYN+++ C +++EA +LL EM K I PD T N L++A
Sbjct: 329 LREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYC 388
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
K ++ A V M++ G+K D+ +Y +L+ G+C V E+ AK+ SM ++G +P
Sbjct: 389 KIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYA 448
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
+YS +++G K DE LL E + + + D Y LI +CK +V +A
Sbjct: 449 TYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYA 501
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 137/262 (52%), Gaps = 3/262 (1%)
Query: 105 PDTIT--FTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAAL 162
P+ ++ F+ LM G + ++ + + + G + +L+N L K T
Sbjct: 129 PEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVW 188
Query: 163 QLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGF 222
++ +++ V ++ +Y +++H+ K A L SEM + V PD+FTYN LI +
Sbjct: 189 KIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVY 248
Query: 223 CIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDI 282
C S EA + D M + P+ T+N + +EG ++EA T L +K V +
Sbjct: 249 CKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREA-TRLFREIKDDVTANH 307
Query: 283 ITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAE 342
+TY +L+DGYC ++++++A + M RG +P V +Y+ ++ LC+ ++ EA LL E
Sbjct: 308 VTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTE 367
Query: 343 MDCKNIIPDTVTYSSLIDGLCK 364
M K I PD +T ++LI+ CK
Sbjct: 368 MSGKKIEPDNITCNTLINAYCK 389
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 122/225 (54%), Gaps = 1/225 (0%)
Query: 154 KMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVF 213
K G ++ + QI+ +KP ++ T++++S K +L + ++ +M+ V+ ++
Sbjct: 145 KAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIH 204
Query: 214 TYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVM 273
YN L++ ++A KLL EM K + PD +T+N L+ K+ EA +V M
Sbjct: 205 VYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRM 264
Query: 274 MKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKV 333
+ GV P+I+TYNS + G+ + +A +F + A +V +Y+ +I+G C+ +
Sbjct: 265 ERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHV-TYTTLIDGYCRMNDI 323
Query: 334 DEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
DEAL L M+ + P VTY+S++ LC+ GR+ A L+ ++
Sbjct: 324 DEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEM 368
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 123/297 (41%), Gaps = 12/297 (4%)
Query: 8 KNSLPPSIRNADDAVSIFNRLLRMSP------------TPPIIEFNKILTSLVKMKHYPT 55
++ + P+I + + F+R RM T + + ++ +M
Sbjct: 266 RSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDE 325
Query: 56 AISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMK 115
A+ L ++ G SP + T ++ C +I A +L ++ + PD IT TL+
Sbjct: 326 ALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLIN 385
Query: 116 GLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKP 175
C + +A++ ++ G +LD +Y+ LI+G CK+ + A + + + + P
Sbjct: 386 AYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSP 445
Query: 176 DVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLL 235
Y+ ++ F + L E R + DV Y LI C + Q+ A L
Sbjct: 446 GYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLF 505
Query: 236 DEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGY 292
+ M K + D+ F + A + G V EA + VM + + ++ Y S+ Y
Sbjct: 506 ESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASY 562
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 87/171 (50%), Gaps = 6/171 (3%)
Query: 212 VFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLA 271
VF++ +IY + + ++ + +++ + + P +L+++L K+ +
Sbjct: 135 VFSW-LMIY-YAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFK 192
Query: 272 VMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTK 331
M+K GV +I YN L+ + KA+ + + M ++G+ P++ +Y+ +I+ CK
Sbjct: 193 KMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKS 252
Query: 332 KVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA----WELVDDV 378
EAL++ M+ + P+ VTY+S I G + GR+ A E+ DDV
Sbjct: 253 MHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDV 303
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 189 KDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAY 248
K K A+ L ++ R +L +L+ G V+++ ++
Sbjct: 92 KHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGG-----------------VSEDPEDVSH 134
Query: 249 TFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM 308
F+ L+ K G + ++ V + G+KP + L++ + IF M
Sbjct: 135 VFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKM 194
Query: 309 PQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCK 364
+ G+ N+H Y+++++ K+ ++A LL+EM+ K + PD TY++LI CK
Sbjct: 195 VKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCK 250
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 130/207 (62%)
Query: 173 VKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEAT 232
+K DV + T I+ CKD +A NL++EM + + P+V TYN +I FC + +A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 233 KLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGY 292
+LL M+ K I+PD TF+ L++A KE V EA+ + M++ + P ITYNS++DG+
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 293 CLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDT 352
C V+ AK + +SM +G +P+V ++S +ING CK K+VD + + EM + I+ +T
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 353 VTYSSLIDGLCKSGRVSHAWELVDDVI 379
VTY++LI G C+ G + A +L++++I
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMI 212
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 134/240 (55%)
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ D V +++ LCK G A L ++ + + P+V Y +I SFC SDA
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L M+ +++ PD+ T++ALI F ++ EA ++ EM+ +I P T+N ++D
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
K+ V +AK +L M +G PD++T+++L++GYC V+ +IF M +RGI N
Sbjct: 127 KQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 186
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+Y+ +I+G C+ +D A +LL EM + PD +T+ ++ GLC + A+ +++D+
Sbjct: 187 TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 133/240 (55%)
Query: 104 RPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQ 163
+ D + T ++ LC +G A + +G + +TY +I+ C G+ A Q
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 164 LMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFC 223
L+R + + + PD+ ++ +I++F K++ VS+A +Y EML + P TYN++I GFC
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 224 IVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDII 283
++ +A ++LD M +K PD TF+ L++ K V + M ++G+ + +
Sbjct: 127 KQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 186
Query: 284 TYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM 343
TY +L+ G+C V +++ A+D+ N M G+AP+ ++ M+ GLC K++ +A +L ++
Sbjct: 187 TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 121/233 (51%)
Query: 43 ILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRG 102
I+ L K ++ A +L ++ GI P++ T +I+ +C+ + + A +L ++++
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 103 YRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAAL 162
PD +TF+ L+ +V A + + ++ +TY +I+G CK + A
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 163 QLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGF 222
+++ + + PDV ++ +I+ +CK K V + ++ EM R ++ + TY LI+GF
Sbjct: 136 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 195
Query: 223 CIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMK 275
C V L A LL+EM++ + PD TF+ ++ L + +++A +L + K
Sbjct: 196 CQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 117/243 (48%)
Query: 68 ISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTAL 127
I D+ T +++ C +A ++ ++ ++G P+ +T+ ++ C +G+ A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 128 QFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSF 187
Q H++ + D VT+ LIN K + A ++ +++ + P Y +I F
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 188 CKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDA 247
CK V DA + M ++ PDV T++ LI G+C ++ ++ EM + I +
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 248 YTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNS 307
T+ L+ + G++ A+ +L M+ GV PD IT++ ++ G C E+ KA I
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 245
Query: 308 MPQ 310
+ +
Sbjct: 246 LQK 248
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 116/228 (50%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N +A ++F + P ++ +N ++ S + A L + I+PDI T +
Sbjct: 25 NHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFS 84
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
LIN + + +++ A + ++L+ P TIT+ +++ G C +V A + D + ++
Sbjct: 85 ALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASK 144
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G D VT+ LING CK + +++ ++ + + + YT +IH FC+ + A
Sbjct: 145 GCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAA 204
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIH 244
+L +EM++ V PD T++ ++ G C +L++A +L+++ H
Sbjct: 205 QDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEDH 252
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 78/139 (56%)
Query: 238 MVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSE 297
M +I D +VD L K+GN A+ + M ++G+ P+++TYN ++D +C
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 298 VNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSS 357
+ A + M ++ I P++ ++S +IN K +KV EA + EM +I P T+TY+S
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 358 LIDGLCKSGRVSHAWELVD 376
+IDG CK RV A ++D
Sbjct: 121 MIDGFCKQDRVDDAKRMLD 139
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 75/154 (48%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
R +A I+ +LR S P I +N ++ K A + + G SPD+ T
Sbjct: 94 RKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTF 153
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
+ LIN YC ++ + + ++ +RG +T+T+TTL+ G C G + A + +++
Sbjct: 154 STLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMIS 213
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQ 169
G D +T+ ++ GLC + R A ++ +Q
Sbjct: 214 CGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 247
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 67/122 (54%), Gaps = 2/122 (1%)
Query: 273 MMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKK 332
M + +K D++ +++D C A+++F M ++GI PNV +Y+ MI+ C + +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 333 VDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI--FIFNVWMSYAK 390
+A LL M K I PD VT+S+LI+ K +VS A E+ +++ IF ++Y
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 391 AI 392
I
Sbjct: 121 MI 122
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 187/363 (51%), Gaps = 11/363 (3%)
Query: 20 DAVS-IFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D VS I+++++ +P + N ++ S K+ AISL L IS D T +
Sbjct: 111 DQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTV 167
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ C A+ L++++K G PDT+++ TL+ G C G A D +
Sbjct: 168 ISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS---- 223
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
L+ +T+ IL++ + A + R + PDV ++ II+ CK V +
Sbjct: 224 ELNLITHTILLSSYYNL---HAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGL 280
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L EM V P+ TY L+ + + A L +MV + I D + +L+D L
Sbjct: 281 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 340
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
K G+++EA+ ++++ P+++TY +L+DG C +++ A+ I M ++ + PNV
Sbjct: 341 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 400
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+YS MING K ++EA++LL +M+ +N++P+ TY ++IDGL K+G+ A EL ++
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460
Query: 379 IFI 381
I
Sbjct: 461 RLI 463
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 161/329 (48%), Gaps = 13/329 (3%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P I FN ++ S K + L ++ GI P + + I++ C ++ A +
Sbjct: 571 PDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHI 630
Query: 95 LAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCK 154
L +++ P+ T+ + + + + H+ +++ G +L + Y LI LCK
Sbjct: 631 LNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCK 690
Query: 155 MGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFT 214
+G T+ A +M ++ + PD + ++H + V A + YS M+ + P+V T
Sbjct: 691 LGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVAT 750
Query: 215 YNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMM 274
YN +I G +KE K L EM ++ + PD +T+N L+ K GN+K + T+ M+
Sbjct: 751 YNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMI 810
Query: 275 KQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCK----- 329
G+ P TYN L+ + V ++ +A+++ M +RG++PN +Y MI+GLCK
Sbjct: 811 ADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHP 870
Query: 330 ----TKK---VDEALNLLAEM-DCKNIIP 350
KK + EA LL EM + K IP
Sbjct: 871 DVEWNKKAMYLAEAKGLLKEMVEEKGYIP 899
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 149/298 (50%)
Query: 67 GISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA 126
GI PDI T I++N Q + K+ G +P ++ ++ LC NG+++ A
Sbjct: 568 GIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEA 627
Query: 127 LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS 186
+ + ++ + TYRI ++ K + A + + +K ++Y +I +
Sbjct: 628 IHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIAT 687
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
CK + A + +M AR +PD T+N+L++G+ + S +++A M+ I P+
Sbjct: 688 LCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPN 747
Query: 247 AYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFN 306
T+N ++ L G +KE L+ M +G++PD TYN+L+ G + + + I+
Sbjct: 748 VATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYC 807
Query: 307 SMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCK 364
M G+ P +Y+++I+ K+ +A LL EM + + P+T TY ++I GLCK
Sbjct: 808 EMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 181/385 (47%), Gaps = 40/385 (10%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++AVS+ ++ + P + ++ L K AI LS ++ G+ + + L L
Sbjct: 416 EEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDAL 475
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
+N +I ++ ++ +G D I +T+L+ G + AL + + + +G
Sbjct: 476 VNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGM 535
Query: 139 RLDQVTYRILINGLCKMGQTRA--ALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
D V+Y +LI+G+ K G+ A A + MR+ + ++PD+ + I+++S K
Sbjct: 536 PWDVVSYNVLISGMLKFGKVGADWAYKGMRE---KGIEPDIATFNIMMNSQRKQGDSEGI 592
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
L+ +M + + P + + N ++ C +++EA +L++M+ IHP+ T+ I +D
Sbjct: 593 LKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDT 652
Query: 257 -----------------------------------LGKEGNVKEAKTVLAVMMKQGVKPD 281
L K G K+A V+ M +G PD
Sbjct: 653 SSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPD 712
Query: 282 IITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLA 341
+T+NSLM GY + S V KA ++ M + GI+PNV +Y+ +I GL + E L+
Sbjct: 713 TVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLS 772
Query: 342 EMDCKNIIPDTVTYSSLIDGLCKSG 366
EM + + PD TY++LI G K G
Sbjct: 773 EMKSRGMRPDDFTYNALISGQAKIG 797
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 191/424 (45%), Gaps = 68/424 (16%)
Query: 18 ADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLD------------- 64
AD+A + +++M P + +N ++ K+ ++ A +L ++
Sbjct: 177 ADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSS 236
Query: 65 ---------------FTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTIT 109
+G PD+ T + +IN C ++ +L ++ + P+ +T
Sbjct: 237 YYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVT 296
Query: 110 FTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQ 169
+TTL+ L + AL + +V +G +D V Y +L++GL K G R A + + +
Sbjct: 297 YTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLL 356
Query: 170 GQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLK 229
P+V YT ++ CK +S A + ++ML + V+P+V TY+++I G+ L+
Sbjct: 357 EDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLE 416
Query: 230 EATKLLDEMVTKNIHPDAYTFNILVDAL---GKE-------------------------- 260
EA LL +M +N+ P+ +T+ ++D L GKE
Sbjct: 417 EAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALV 476
Query: 261 ------GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
G +KE K ++ M+ +GV D I Y SL+D + + A M +RG+
Sbjct: 477 NHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMP 536
Query: 315 PNVHSYSIMINGLCKTKKV--DEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAW 372
+V SY+++I+G+ K KV D A + E K I PD T++ +++ K G
Sbjct: 537 WDVVSYNVLISGMLKFGKVGADWAYKGMRE---KGIEPDIATFNIMMNSQRKQGDSEGIL 593
Query: 373 ELVD 376
+L D
Sbjct: 594 KLWD 597
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 151/323 (46%), Gaps = 32/323 (9%)
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQF-HDHVVAQ 136
L Y + ++ A L+ + G PD+ + +L+ +NG V + + ++A
Sbjct: 64 LFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIAC 123
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G D +LI+ CK+G+ A+ L+R +++ D Y +I C+ L +A
Sbjct: 124 GVSPDVFALNVLIHSFCKVGRLSFAISLLRN---RVISIDTVTYNTVISGLCEHGLADEA 180
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDE------------------- 237
Y SEM+ +LPD +YN LI GFC V A L+DE
Sbjct: 181 YQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNL 240
Query: 238 ---------MVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSL 288
MV PD TF+ +++ L K G V E +L M + V P+ +TY +L
Sbjct: 241 HAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTL 300
Query: 289 MDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNI 348
+D + A +++ M RGI ++ Y+++++GL K + EA + N
Sbjct: 301 VDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQ 360
Query: 349 IPDTVTYSSLIDGLCKSGRVSHA 371
+P+ VTY++L+DGLCK+G +S A
Sbjct: 361 VPNVVTYTALVDGLCKAGDLSSA 383
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 171/358 (47%), Gaps = 1/358 (0%)
Query: 24 IFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYC 83
+ + MS P + + ++ SL K Y A++L Q+ GI D+ T+L++
Sbjct: 281 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 340
Query: 84 NQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQV 143
+ A +L+ P+ +T+T L+ GLC G + +A ++ + + V
Sbjct: 341 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 400
Query: 144 TYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEM 203
TY +ING K G A+ L+R+++ Q V P+ Y +I K A L EM
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460
Query: 204 LARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNV 263
V + + +AL+ + ++KE L+ +MV+K + D + L+D K G+
Sbjct: 461 RLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDE 520
Query: 264 KEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIM 323
+ A M ++G+ D+++YN L+ G +V A + M ++GI P++ +++IM
Sbjct: 521 EAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIM 579
Query: 324 INGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVIFI 381
+N K + L L +M I P ++ + ++ LC++G++ A +++ ++ +
Sbjct: 580 MNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLM 637
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 150/312 (48%), Gaps = 1/312 (0%)
Query: 67 GISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA 126
G+ D+ + +LI+ ++ + ++ + ++G PD TF +M G +
Sbjct: 534 GMPWDVVSYNVLISGMLKFGKVGADWAYKG-MREKGIEPDIATFNIMMNSQRKQGDSEGI 592
Query: 127 LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS 186
L+ D + + G + ++ I++ LC+ G+ A+ ++ Q+ + P++ Y I + +
Sbjct: 593 LKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDT 652
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
K K + + +L+ + YN LI C + K+A ++ +M + PD
Sbjct: 653 SSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPD 712
Query: 247 AYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFN 306
TFN L+ +V++A + +VMM+ G+ P++ TYN+++ G + + +
Sbjct: 713 TVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLS 772
Query: 307 SMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
M RG+ P+ +Y+ +I+G K + ++ + EM ++P T TY+ LI G
Sbjct: 773 EMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVG 832
Query: 367 RVSHAWELVDDV 378
++ A EL+ ++
Sbjct: 833 KMLQARELLKEM 844
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 127/277 (45%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
+++ + +++++ P ++ N ++ L + AI + +Q+ I P++ T
Sbjct: 588 DSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYR 647
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
I ++ + + F +L G + + TL+ LC G + A + A+
Sbjct: 648 IFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEAR 707
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
GF D VT+ L++G R AL + + P+V Y II L+ +
Sbjct: 708 GFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEV 767
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
SEM +R + PD FTYNALI G + +K + + EM+ + P T+N+L+
Sbjct: 768 DKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISE 827
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYC 293
G + +A+ +L M K+GV P+ TY +++ G C
Sbjct: 828 FANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLC 864
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 166/387 (42%), Gaps = 36/387 (9%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A F LL + P ++ + ++ L K +A + Q+ + P++ T + +I
Sbjct: 347 EAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMI 406
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
N Y + + A S+L K+ + P+ T+ T++ GL G+ + A++ + G
Sbjct: 407 NGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVE 466
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
+ L+N L ++G+ + L++ + + V D YT +I F K A
Sbjct: 467 ENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAW 526
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
EM R + DV +YN LI G ++ A M K I PD TFNI++++ K
Sbjct: 527 AEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRK 585
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
+G+ + + M G+KP +++ N ++ C ++ +A I N M I PN+ +
Sbjct: 586 QGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTT 645
Query: 320 YSI-----------------------------------MINGLCKTKKVDEALNLLAEMD 344
Y I +I LCK +A ++ +M+
Sbjct: 646 YRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDME 705
Query: 345 CKNIIPDTVTYSSLIDGLCKSGRVSHA 371
+ IPDTVT++SL+ G V A
Sbjct: 706 ARGFIPDTVTFNSLMHGYFVGSHVRKA 732
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 117/280 (41%), Gaps = 67/280 (23%)
Query: 166 RQIQGQLVKPDVEMYTIIIHSFCK-----DKLVSDAYNLYSEMLARRVLPDVFTYNALIY 220
R+ L +Y + H+ + ++L A L S M V+PD +N+LI+
Sbjct: 43 RRFDPDLAPIKTRVYVSLFHTLFRLYLSCERLYGAARTL-SAMCTFGVVPDSRLWNSLIH 101
Query: 221 GFCIVSQLKEATKLL-DEMVTKNIHPDAYTFNILVDALGKEGNVK--------------- 264
F + + + L+ +M+ + PD + N+L+ + K G +
Sbjct: 102 QFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDT 161
Query: 265 -----------------EAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAK----- 302
EA L+ M+K G+ PD ++YN+L+DG+C V +AK
Sbjct: 162 VTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDE 221
Query: 303 -----------------------DIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNL 339
+ + M G P+V ++S +IN LCK KV E L
Sbjct: 222 ISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLL 281
Query: 340 LAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
L EM+ ++ P+ VTY++L+D L K+ HA L ++
Sbjct: 282 LREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMV 321
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 186/344 (54%), Gaps = 3/344 (0%)
Query: 15 IRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFT 74
I D+AV +FN ++ T ++ +N ++ L K K AI + ++ TG P+ +T
Sbjct: 283 IGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYT 342
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
++L+N + Q+ V+ +I KR Y I ++ L++ L G V A + +
Sbjct: 343 YSLLLNLLVAEGQLVRLDGVV-EISKR-YMTQGI-YSYLVRTLSKLGHVSEAHRLFCDMW 399
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
+ + ++ +Y ++ LC G+T A++++ +I + V D MY + + K K +S
Sbjct: 400 SFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQIS 459
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
++L+ +M PD+FTYN LI F V ++ EA + +E+ + PD ++N L+
Sbjct: 460 HIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLI 519
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
+ LGK G+V EA M ++G+ PD++TY++LM+ + V A +F M +G
Sbjct: 520 NCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQ 579
Query: 315 PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSL 358
PN+ +Y+I+++ L K + EA++L ++M + + PD++TY+ L
Sbjct: 580 PNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 160/320 (50%), Gaps = 5/320 (1%)
Query: 56 AISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMK 115
A+ L +++ G++ ++ L+ + A V +++++ G RP+ T++ L+
Sbjct: 289 AVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLN 348
Query: 116 GLCLNGQVQTALQFHDHVVAQGFR-LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVK 174
L GQ L D VV R + Q Y L+ L K+G A +L + VK
Sbjct: 349 LLVAEGQ----LVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVK 404
Query: 175 PDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKL 234
+ + Y ++ S C +A + S++ + V+ D YN + + Q+ L
Sbjct: 405 GERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDL 464
Query: 235 LDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCL 294
++M PD +T+NIL+ + G+ G V EA + + + KPDII+YNSL++
Sbjct: 465 FEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGK 524
Query: 295 VSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVT 354
+V++A F M ++G+ P+V +YS ++ KT++V+ A +L EM K P+ VT
Sbjct: 525 NGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVT 584
Query: 355 YSSLIDGLCKSGRVSHAWEL 374
Y+ L+D L K+GR + A +L
Sbjct: 585 YNILLDCLEKNGRTAEAVDL 604
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 174/364 (47%), Gaps = 6/364 (1%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
R+ A ++ + R I +N +L +L K + A + + D +T
Sbjct: 217 RDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEK---ACQVFEDMKKRHCRRDEYTY 273
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
TI+I + A + +++ G + + + TLM+ L V A+Q +V
Sbjct: 274 TIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVE 333
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
G R ++ TY +L+N L GQ L + +I + + + Y+ ++ + K VS+
Sbjct: 334 TGCRPNEYTYSLLLNLLVAEGQL-VRLDGVVEISKRYMTQGI--YSYLVRTLSKLGHVSE 390
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
A+ L+ +M + V + +Y +++ C + EA ++L ++ K + D +N +
Sbjct: 391 AHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFS 450
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
ALGK + + M K G PDI TYN L+ + V EV++A +IF + + P
Sbjct: 451 ALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKP 510
Query: 316 NVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
++ SY+ +IN L K VDEA EM K + PD VTYS+L++ K+ RV A+ L
Sbjct: 511 DIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLF 570
Query: 376 DDVI 379
++++
Sbjct: 571 EEML 574
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 86/183 (46%), Gaps = 21/183 (11%)
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
YN +L+R LPD F +LD MV N+H + T NIL+
Sbjct: 136 YNRIILILSRSNLPDRF---------------DRVRSILDSMVKSNVHGNISTVNILI-- 178
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
G GN ++ + L ++ K +K + TY L+ Y + +KA D++ + + G +
Sbjct: 179 -GFFGNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLD 237
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
+ +Y+++++ L K +K + + + C+ D TY+ +I + + G+ A L +
Sbjct: 238 IFAYNMLLDALAKDEKACQVFEDMKKRHCRR---DEYTYTIMIRTMGRIGKCDEAVGLFN 294
Query: 377 DVI 379
++I
Sbjct: 295 EMI 297
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 183/375 (48%), Gaps = 36/375 (9%)
Query: 41 NKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILK 100
N IL+ L K A L +++ GI P++ + ++ +C Q + A V + IL+
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 101 RGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRA 160
+G +P+ T++ L+ G N Q AL+ +H+ + ++ V Y+ +INGLCK+GQT
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566
Query: 161 ALQLM------------------------------------RQIQGQLVKPDVEMYTIII 184
A +L+ ++ G + P+V YT ++
Sbjct: 567 ARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLM 626
Query: 185 HSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIH 244
+ CK+ + A + EM + V D+ Y ALI GFC S ++ A+ L E++ + ++
Sbjct: 627 NGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLN 686
Query: 245 PDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDI 304
P +N L+ GN+ A + M+K G++ D+ TY +L+DG + A ++
Sbjct: 687 PSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASEL 746
Query: 305 FNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCK 364
+ M G+ P+ Y++++NGL K + + + + EM N+ P+ + Y+++I G +
Sbjct: 747 YTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYR 806
Query: 365 SGRVSHAWELVDDVI 379
G + A+ L D+++
Sbjct: 807 EGNLDEAFRLHDEML 821
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 193/400 (48%), Gaps = 37/400 (9%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
R D AV I N++L + P N+ L++LV+ A L ++ G+ D T
Sbjct: 177 RQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTT 236
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCL---------------- 119
+L+ + + A VL++ ++RG PD++ ++ ++ C
Sbjct: 237 QLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKE 296
Query: 120 --------------------NGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
G + A++ D +++ G ++ V LI G CK
Sbjct: 297 KKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLV 356
Query: 160 AALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
+AL L +++ + P+ ++++I F K+ + A Y +M + P VF + +I
Sbjct: 357 SALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTII 416
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVK 279
G+ + +EA KL DE + + + N ++ L K+G EA +L+ M +G+
Sbjct: 417 QGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIG 475
Query: 280 PDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNL 339
P++++YN++M G+C ++ A+ +F+++ ++G+ PN ++YSI+I+G + AL +
Sbjct: 476 PNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEV 535
Query: 340 LAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+ M NI + V Y ++I+GLCK G+ S A EL+ ++I
Sbjct: 536 VNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMI 575
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 184/384 (47%), Gaps = 35/384 (9%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEF----------------------------------NKIL 44
+ A+ + ++ + TP + N IL
Sbjct: 391 EKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTIL 450
Query: 45 TSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYR 104
+ L K A L +++ GI P++ + ++ +C Q + A V + IL++G +
Sbjct: 451 SWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLK 510
Query: 105 PDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQL 164
P+ T++ L+ G N Q AL+ +H+ + ++ V Y+ +INGLCK+GQT A +L
Sbjct: 511 PNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAREL 570
Query: 165 M-RQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFC 223
+ I+ + + Y II F K+ + A Y EM + P+V TY +L+ G C
Sbjct: 571 LANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLC 630
Query: 224 IVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDII 283
+++ +A ++ DEM K + D + L+D K N++ A + + ++++G+ P
Sbjct: 631 KNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQP 690
Query: 284 TYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM 343
YNSL+ G+ + + A D++ M + G+ ++ +Y+ +I+GL K + A L EM
Sbjct: 691 IYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEM 750
Query: 344 DCKNIIPDTVTYSSLIDGLCKSGR 367
++PD + Y+ +++GL K G+
Sbjct: 751 QAVGLVPDEIIYTVIVNGLSKKGQ 774
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 189/380 (49%), Gaps = 35/380 (9%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P + ++ + VK + AI L ++ GIS ++ T LI +C + SA +
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL 361
Query: 95 LAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQF--------------HDHVVAQGFRL 140
K+ K G P+++TF+ L++ NG+++ AL+F H H + QG+
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLK 421
Query: 141 DQVTYRIL--------------------INGLCKMGQTRAALQLMRQIQGQLVKPDVEMY 180
Q L ++ LCK G+T A +L+ +++ + + P+V Y
Sbjct: 422 GQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSY 481
Query: 181 TIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVT 240
++ C+ K + A ++S +L + + P+ +TY+ LI G + A ++++ M +
Sbjct: 482 NNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTS 541
Query: 241 KNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQG-VKPDIITYNSLMDGYCLVSEVN 299
NI + + +++ L K G +A+ +LA M+++ + ++YNS++DG+ E++
Sbjct: 542 SNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMD 601
Query: 300 KAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLI 359
A + M GI+PNV +Y+ ++NGLCK ++D+AL + EM K + D Y +LI
Sbjct: 602 SAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALI 661
Query: 360 DGLCKSGRVSHAWELVDDVI 379
DG CK + A L +++
Sbjct: 662 DGFCKRSNMESASALFSELL 681
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 167/347 (48%), Gaps = 1/347 (0%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
+N D A +F+ +L P ++ ++ + A+ + + + + I +
Sbjct: 492 KNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVY 551
Query: 76 TILINCYCNQAQITSAFSVLAKILK-RGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
+IN C Q + A +LA +++ + +++ +++ G G++ +A+ ++ +
Sbjct: 552 QTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMC 611
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
G + +TY L+NGLCK + AL++ +++ + VK D+ Y +I FCK +
Sbjct: 612 GNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNME 671
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
A L+SE+L + P YN+LI GF + + A L +M+ + D T+ L+
Sbjct: 672 SASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLI 731
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
D L K+GN+ A + M G+ PD I Y +++G + K +F M + +
Sbjct: 732 DGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVT 791
Query: 315 PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDG 361
PNV Y+ +I G + +DEA L EM K I+PD T+ L+ G
Sbjct: 792 PNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 125/301 (41%), Gaps = 43/301 (14%)
Query: 131 DHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKD 190
D + GF ++ + L+N K QT A+ ++ Q+ V P + + +
Sbjct: 152 DSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQR 211
Query: 191 KLVSDAYNLYSEMLA-----------------------------------RRVLPDVFTY 215
+++A LYS M+A R PD Y
Sbjct: 212 NSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLY 271
Query: 216 NALIYGFCIVSQLKEATKLLDEMVTKNIH-PDAYTFNILVDALGKEGNVKEAKTVLAVMM 274
+ + C L A LL EM K + P T+ ++ A K+GN+ +A + M+
Sbjct: 272 SLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEML 331
Query: 275 KQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVD 334
G+ +++ SL+ G+C +++ A +F+ M + G +PN ++S++I K +++
Sbjct: 332 SDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEME 391
Query: 335 EALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV-------IFIFNVWMS 387
+AL +M+ + P ++I G K + A +L D+ +F+ N +S
Sbjct: 392 KALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILS 451
Query: 388 Y 388
+
Sbjct: 452 W 452
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
Query: 9 NSLPPSIRNADD---AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDF 65
NSL RN + A+ ++ ++L+ + + ++ L+K + A L ++
Sbjct: 693 NSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQA 752
Query: 66 TGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQT 125
G+ PD T+++N + Q + ++ K P+ + + ++ G G +
Sbjct: 753 VGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDE 812
Query: 126 ALQFHDHVVAQGFRLDQVTYRILING 151
A + HD ++ +G D T+ IL++G
Sbjct: 813 AFRLHDEMLDKGILPDGATFDILVSG 838
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 180/363 (49%), Gaps = 2/363 (0%)
Query: 19 DDAVSIFNRLL-RMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTI 77
+DA+ + R++ P + +N IL ++ K L + G+ P+ T
Sbjct: 221 EDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNN 280
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
L+ YC + AF ++ + + PD T+ L+ GLC G ++ L+ D + +
Sbjct: 281 LVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLK 340
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
+ D VTY LI+G ++G + A +LM Q++ VK + + I + CK++
Sbjct: 341 LQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVT 400
Query: 198 NLYSEMLARRVL-PDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
E++ PD+ TY+ LI + V L A +++ EM K I + T N ++DA
Sbjct: 401 RKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDA 460
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
L KE + EA +L K+G D +TY +L+ G+ +V KA ++++ M + I P
Sbjct: 461 LCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPT 520
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
V +++ +I GLC K + A+ E+ ++PD T++S+I G CK GRV A+E +
Sbjct: 521 VSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYN 580
Query: 377 DVI 379
+ I
Sbjct: 581 ESI 583
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 204/420 (48%), Gaps = 46/420 (10%)
Query: 4 FLRLKNSLPPSIRNADDAVSIFNRLLR----MSPTPPIIEFNKILTSLVKMKHYPTAISL 59
F K+ L IR +D ++S+ N LL +SP P F+ L++ + A+ +
Sbjct: 94 FADAKSLLVSYIRTSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQI 153
Query: 60 SHQLDFTGISPDIFTL-TILINC--YCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKG 116
++ + P++ T T+LI Y + I+SA V ++K G + TF L+ G
Sbjct: 154 FQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNG 213
Query: 117 LCLNGQVQTALQFHDHVVAQGFRL--DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVK 174
CL G+++ AL + +V++ F++ D VTY ++ + K G+ +L+ ++ +
Sbjct: 214 YCLEGKLEDALGMLERMVSE-FKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLV 272
Query: 175 PDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKL 234
P+ Y +++ +CK + +A+ + M VLPD+ TYN LI G C ++E +L
Sbjct: 273 PNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLEL 332
Query: 235 LDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVK--------------- 279
+D M + + PD T+N L+D + G EA+ ++ M GVK
Sbjct: 333 MDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCK 392
Query: 280 ---------------------PDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
PDI+TY++L+ Y V +++ A ++ M Q+GI N
Sbjct: 393 EEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTI 452
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+ + +++ LCK +K+DEA NLL + I D VTY +LI G + +V A E+ D++
Sbjct: 453 TLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEM 512
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 174/380 (45%), Gaps = 37/380 (9%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P + +N ++ K+ A + + T + PD+ T ILIN CN + +
Sbjct: 273 PNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLEL 332
Query: 95 LAKILKRGYRPDTITFTTLMKG-----LCLNGQVQTALQFHDHVVA-------------- 135
+ + +PD +T+ TL+ G L L + +D V A
Sbjct: 333 MDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCK 392
Query: 136 -----------------QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVE 178
GF D VTY LI K+G AL++MR++ + +K +
Sbjct: 393 EEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTI 452
Query: 179 MYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEM 238
I+ + CK++ + +A+NL + R + D TY LI GF ++++A ++ DEM
Sbjct: 453 TLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEM 512
Query: 239 VTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEV 298
I P TFN L+ L G + A + + G+ PD T+NS++ GYC V
Sbjct: 513 KKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRV 572
Query: 299 NKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSL 358
KA + +N + P+ ++ +I++NGLCK ++ALN + + + DTVTY+++
Sbjct: 573 EKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTM 631
Query: 359 IDGLCKSGRVSHAWELVDDV 378
I CK ++ A++L+ ++
Sbjct: 632 ISAFCKDKKLKEAYDLLSEM 651
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 176/357 (49%), Gaps = 2/357 (0%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+ + + + + + P ++ +N ++ ++ A L Q++ G+ + T I +
Sbjct: 328 EGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISL 387
Query: 80 NCYCNQAQITSAFSVLAKILK-RGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
C + + + + +++ G+ PD +T+ TL+K G + AL+ + +G
Sbjct: 388 KWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGI 447
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+++ +T +++ LCK + A L+ + D Y +I F +++ V A
Sbjct: 448 KMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALE 507
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
++ EM ++ P V T+N+LI G C + + A + DE+ + PD TFN ++
Sbjct: 508 MWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYC 567
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
KEG V++A +K KPD T N L++G C KA + FN++ + V
Sbjct: 568 KEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTV- 626
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
+Y+ MI+ CK KK+ EA +LL+EM+ K + PD TY+S I L + G++S EL+
Sbjct: 627 TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELL 683
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 162/331 (48%), Gaps = 24/331 (7%)
Query: 63 LDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQ 122
+D G SPDI T LI Y ++ A ++ ++ ++G + +TIT T++ LC +
Sbjct: 407 VDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERK 466
Query: 123 VQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTI 182
+ A + +GF +D+VTY LI G + + AL++ +++ + P V +
Sbjct: 467 LDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNS 526
Query: 183 IIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKN 242
+I C A + E+ +LPD T+N++I G+C ++++A + +E + +
Sbjct: 527 LIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHS 586
Query: 243 IHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAK 302
PD YT NIL++ L KEG ++A ++++ + D +TYN+++ +C ++ +A
Sbjct: 587 FKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAY 645
Query: 303 DIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCK---------------- 346
D+ + M ++G+ P+ +Y+ I+ L + K+ E LL + K
Sbjct: 646 DLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNP 705
Query: 347 -------NIIPDTVTYSSLIDGLCKSGRVSH 370
+ + + YS +ID LC GR+
Sbjct: 706 ATSESKEELNTEAIAYSDVIDELCSRGRLKE 736
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 114/247 (46%), Gaps = 13/247 (5%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+ A+ +++ + ++ TP + FN ++ L A+ +L +G+ PD T +
Sbjct: 503 EKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSI 562
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I YC + ++ AF + +K ++PD T L+ GLC G + AL F + ++ +
Sbjct: 563 ILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER- 621
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+D VTY +I+ CK + + A L+ +++ + ++PD Y I +D +S+
Sbjct: 622 EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDE 681
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L + + + ++ + ++ AT E ++ +A ++ ++D L
Sbjct: 682 LLKKFSGK--------FGSMKRDLQVETEKNPATSESKE----ELNTEAIAYSDVIDELC 729
Query: 259 KEGNVKE 265
G +KE
Sbjct: 730 SRGRLKE 736
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 169/347 (48%), Gaps = 5/347 (1%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
DDA LL P ++ +N ++ +KM + A L L I P I T L
Sbjct: 360 DDA----RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTL 415
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ C + A + ++ + PD IT+TTL+KG NG + A + +D ++ +G
Sbjct: 416 IDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGI 475
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQ-IQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
+ D Y G ++G + A +L + + PD+ +Y + I CK + A
Sbjct: 476 KPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAI 535
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
++ ++PD TY +I G+ Q K A L DEM+ K ++P T+ +L+
Sbjct: 536 EFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGH 595
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
K G +++A M K+GV+P+++T+N+L+ G C +++A M + GI PN
Sbjct: 596 AKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNK 655
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCK 364
+SY+++I+ C +K +E + L EM K I PD T+ +L L K
Sbjct: 656 YSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 702
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 172/334 (51%), Gaps = 5/334 (1%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
FN ++ K + A ++ ++ GI P T I I C+ +I A +L+ +
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
PD +++ TLM G G+ A D + A VTY LI+GLC+ G
Sbjct: 371 A----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 160 AALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
A +L ++ QL+ PDV YT ++ F K+ +S A +Y EML + + PD + Y
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIH-PDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGV 278
G + +A +L +EMV + H PD +N+ +D L K GN+ +A + + G+
Sbjct: 487 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL 546
Query: 279 KPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALN 338
PD +TY +++ GY + A+++++ M ++ + P+V +Y ++I G K ++++A
Sbjct: 547 VPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQ 606
Query: 339 LLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAW 372
EM + + P+ +T+++L+ G+CK+G + A+
Sbjct: 607 YSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAY 640
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 169/351 (48%), Gaps = 5/351 (1%)
Query: 25 FNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCN 84
F +++R P + N +L L + A ++ + GI P + T +++
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 85 QAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVT 144
+ + ++ +R +T+ L+ G NG+++ A +FH + GF + +
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 145 YRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEML 204
+ LI G CK G A + ++ + P Y I I + C + DA L S M
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370
Query: 205 ARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVK 264
A PDV +YN L++G+ + + EA+ L D++ +IHP T+N L+D L + GN++
Sbjct: 371 A----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 265 EAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMI 324
A+ + M Q + PD+ITY +L+ G+ ++ A ++++ M ++GI P+ ++Y+
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486
Query: 325 NGLCKTKKVDEALNLLAEM-DCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
G + D+A L EM + PD Y+ IDGLCK G + A E
Sbjct: 487 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEF 537
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 172/416 (41%), Gaps = 53/416 (12%)
Query: 7 LKNSLPPSIRNAD-------------DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHY 53
++ PS+RN + A +++ ++ P +I FN +L S K
Sbjct: 195 IRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDL 254
Query: 54 PTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTL 113
+ ++ I T ILIN + ++ A + + G+ +F L
Sbjct: 255 ERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPL 314
Query: 114 MKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLV 173
++G C G A D ++ G TY I I LC G+ A R++ +
Sbjct: 315 IEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA----RELLSSMA 370
Query: 174 KPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATK 233
PDV Y ++H + K +A L+ ++ A + P + TYN LI G C L+ A +
Sbjct: 371 APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQR 430
Query: 234 LLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPD------------ 281
L +EM T+ I PD T+ LV K GN+ A V M+++G+KPD
Sbjct: 431 LKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGEL 490
Query: 282 ------------------------IITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
+ YN +DG C V + KA + + + G+ P+
Sbjct: 491 RLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDH 550
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWE 373
+Y+ +I G + + A NL EM K + P +TY LI G K+GR+ A++
Sbjct: 551 VTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQ 606
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 150/285 (52%), Gaps = 4/285 (1%)
Query: 95 LAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCK 154
K++++G+ P ++K L + + A ++ ++ G +T+ +++ K
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 155 MGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFT 214
G ++ +++ + ++ Y I+I+ F K+ + +A + +M ++
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 215 YNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMM 274
+N LI G+C +A + DEM+ I+P T+NI + AL G + +A+ +L+ M
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM- 369
Query: 275 KQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVD 334
PD+++YN+LM GY + + +A +F+ + I P++ +Y+ +I+GLC++ ++
Sbjct: 370 ---AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 335 EALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
A L EM + I PD +TY++L+ G K+G +S A E+ D+++
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 471
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 141/317 (44%), Gaps = 12/317 (3%)
Query: 67 GISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA 126
G P + I++ + + A +V +++ G P ITF T++ G ++
Sbjct: 198 GFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERV 257
Query: 127 LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEM----YTI 182
+ + + +VTY ILING K G+ A R+ G + + + +
Sbjct: 258 DKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEA----RRFHGDMRRSGFAVTPYSFNP 313
Query: 183 IIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKN 242
+I +CK L DA+ + EML + P TYN I C ++ +A +LL M
Sbjct: 314 LIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA-- 371
Query: 243 IHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAK 302
PD ++N L+ K G EA + + + P I+TYN+L+DG C + A+
Sbjct: 372 --PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQ 429
Query: 303 DIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGL 362
+ M + I P+V +Y+ ++ G K + A + EM K I PD Y++ G
Sbjct: 430 RLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGE 489
Query: 363 CKSGRVSHAWELVDDVI 379
+ G A+ L ++++
Sbjct: 490 LRLGDSDKAFRLHEEMV 506
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 115/248 (46%), Gaps = 1/248 (0%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGI-SPDIFTLTILI 79
A +++ +LR P + +++ A L ++ T +PD+ + I
Sbjct: 463 ATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRI 522
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ C + A KI + G PD +T+TT+++G NGQ + A +D ++ +
Sbjct: 523 DGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLY 582
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
+TY +LI G K G+ A Q +++ + V+P+V + +++ CK + +AY
Sbjct: 583 PSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRY 642
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+M + P+ ++Y LI C + +E KL EM+ K I PD YT L L K
Sbjct: 643 LCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 702
Query: 260 EGNVKEAK 267
+ +E +
Sbjct: 703 DHESREVE 710
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 164/310 (52%), Gaps = 1/310 (0%)
Query: 53 YPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTT 112
+PT SL H++ I P T I+ Y + + A + + + G D +F T
Sbjct: 107 HPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNT 166
Query: 113 LMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQL 172
++ LC + +V+ A + + + F +D VTY +++NG C + +T AL++++++ +
Sbjct: 167 ILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERG 225
Query: 173 VKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEAT 232
+ P++ Y ++ F + + A+ + EM R DV TY +++GF + ++K A
Sbjct: 226 INPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRAR 285
Query: 233 KLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGY 292
+ DEM+ + + P T+N ++ L K+ NV+ A + M+++G +P++ TYN L+ G
Sbjct: 286 NVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGL 345
Query: 293 CLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDT 352
E ++ +++ M G PN +Y++MI + +V++AL L +M + +P+
Sbjct: 346 FHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNL 405
Query: 353 VTYSSLIDGL 362
TY+ LI G+
Sbjct: 406 DTYNILISGM 415
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 150/309 (48%), Gaps = 3/309 (0%)
Query: 27 RLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQA 86
R LR+ P+P F + A+ L + G D+ + +++ C
Sbjct: 118 RSLRIGPSPKT--FAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSK 175
Query: 87 QITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYR 146
++ A+ L + L+ + DT+T+ ++ G CL + AL+ +V +G + TY
Sbjct: 176 RVEKAYE-LFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYN 234
Query: 147 ILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLAR 206
++ G + GQ R A + +++ + + DV YT ++H F + A N++ EM+
Sbjct: 235 TMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIRE 294
Query: 207 RVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEA 266
VLP V TYNA+I C ++ A + +EMV + P+ T+N+L+ L G
Sbjct: 295 GVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRG 354
Query: 267 KTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMING 326
+ ++ M +G +P+ TYN ++ Y SEV KA +F M PN+ +Y+I+I+G
Sbjct: 355 EELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISG 414
Query: 327 LCKTKKVDE 335
+ K+ ++
Sbjct: 415 MFVRKRSED 423
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 124/232 (53%), Gaps = 1/232 (0%)
Query: 144 TYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEM 203
T+ I+ G+ A++L + D+ + I+ CK K V AY L+ +
Sbjct: 128 TFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL 187
Query: 204 LARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNV 263
R + D TYN ++ G+C++ + +A ++L EMV + I+P+ T+N ++ + G +
Sbjct: 188 RGRFSV-DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQI 246
Query: 264 KEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIM 323
+ A M K+ + D++TY +++ G+ + E+ +A+++F+ M + G+ P+V +Y+ M
Sbjct: 247 RHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAM 306
Query: 324 INGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
I LCK V+ A+ + EM + P+ TY+ LI GL +G S EL+
Sbjct: 307 IQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELM 358
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 158/347 (45%), Gaps = 7/347 (2%)
Query: 34 TPPIIEFNKILTSLVKMKHYPTAISLSHQLD--FTGISPDIFTLTILINCYCNQAQITSA 91
TP ++ N +L L H P A+ H LD D + + I+ +
Sbjct: 55 TPNLV--NSVLKRL--WNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTV 110
Query: 92 FSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILING 151
+S++ ++ P TF + + G+ A++ ++ G D ++ +++
Sbjct: 111 WSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDV 170
Query: 152 LCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPD 211
LCK + A +L R ++G+ D Y +I++ +C K A + EM+ R + P+
Sbjct: 171 LCKSKRVEKAYELFRALRGRF-SVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPN 229
Query: 212 VFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLA 271
+ TYN ++ GF Q++ A + EM ++ D T+ +V G G +K A+ V
Sbjct: 230 LTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFD 289
Query: 272 VMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTK 331
M+++GV P + TYN+++ C V A +F M +RG PNV +Y+++I GL
Sbjct: 290 EMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAG 349
Query: 332 KVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+ L+ M+ + P+ TY+ +I + V A L + +
Sbjct: 350 EFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 396
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 106/229 (46%)
Query: 15 IRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFT 74
I+ A+ + ++ P + +N +L + A ++ D+ T
Sbjct: 208 IKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVT 267
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
T +++ + +I A +V ++++ G P T+ +++ LC V+ A+ + +V
Sbjct: 268 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMV 327
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
+G+ + TY +LI GL G+ +LM++++ + +P+ + Y ++I + + V
Sbjct: 328 RRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVE 387
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNI 243
A L+ +M + LP++ TYN LI G + + ++ ++ K I
Sbjct: 388 KALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQAFAKEI 436
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 171/333 (51%), Gaps = 7/333 (2%)
Query: 37 IIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLA 96
+ F+ ++++ + + AIS+ + + G+ P++ T +I+ C + + F +A
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGME--FKQVA 324
Query: 97 KIL----KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGL 152
K + G +PD ITF +L+ G + A D + + D +Y L++ +
Sbjct: 325 KFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAI 384
Query: 153 CKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDV 212
CK GQ A +++ Q+ + + P+V Y+ +I F K +A NL+ EM + D
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444
Query: 213 FTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAV 272
+YN L+ + V + +EA +L EM + I D T+N L+ GK+G E K V
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504
Query: 273 MMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKK 332
M ++ V P+++TY++L+DGY +A +IF G+ +V YS +I+ LCK
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGL 564
Query: 333 VDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKS 365
V A++L+ EM + I P+ VTY+S+ID +S
Sbjct: 565 VGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRS 597
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 158/313 (50%), Gaps = 1/313 (0%)
Query: 67 GISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNG-QVQT 125
G ++ + LI+ Y A SV + + G RP+ +T+ ++ G + +
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 126 ALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIH 185
+F D + G + D++T+ L+ + G AA L ++ + ++ DV Y ++
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 186 SFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHP 245
+ CK + A+ + ++M +R++P+V +Y+ +I GF + EA L EM I
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL 442
Query: 246 DAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIF 305
D ++N L+ K G +EA +L M G+K D++TYN+L+ GY + ++ K +F
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 306 NSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKS 365
M + + PN+ +YS +I+G K EA+ + E + D V YS+LID LCK+
Sbjct: 503 TEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKN 562
Query: 366 GRVSHAWELVDDV 378
G V A L+D++
Sbjct: 563 GLVGSAVSLIDEM 575
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 150/288 (52%), Gaps = 2/288 (0%)
Query: 24 IFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYC 83
F+ + R P I FN +L + + A +L ++ I D+F+ L++ C
Sbjct: 326 FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC 385
Query: 84 NQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQV 143
Q+ AF +LA++ + P+ ++++T++ G G+ AL + G LD+V
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 144 TYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEM 203
+Y L++ K+G++ AL ++R++ +K DV Y ++ + K + +++EM
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 204 LARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNV 263
VLP++ TY+ LI G+ KEA ++ E + + D ++ L+DAL K G V
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLV 565
Query: 264 KEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFN--SMP 309
A +++ M K+G+ P+++TYNS++D + + ++++ D N S+P
Sbjct: 566 GSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLP 613
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 144/300 (48%), Gaps = 1/300 (0%)
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
+ +I+ ++T A + GY F+ L+ +G + A+ + +
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 136 QGFRLDQVTYRILINGLCKMG-QTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
G R + VTY +I+ K G + + + ++Q V+PD + ++ + L
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
A NL+ EM RR+ DVF+YN L+ C Q+ A ++L +M K I P+ +++ ++
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
D K G EA + M G+ D ++YN+L+ Y V +A DI M GI
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 315 PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
+V +Y+ ++ G K K DE + EM ++++P+ +TYS+LIDG K G A E+
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 109/205 (53%), Gaps = 1/205 (0%)
Query: 178 EMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDE 237
++ + +I + + V+ A ++ A V+ ++ALI + +EA + +
Sbjct: 234 KLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNS 293
Query: 238 MVTKNIHPDAYTFNILVDALGKEG-NVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVS 296
M + P+ T+N ++DA GK G K+ M + GV+PD IT+NSL+
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
Query: 297 EVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYS 356
A+++F+ M R I +V SY+ +++ +CK ++D A +LA+M K I+P+ V+YS
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 357 SLIDGLCKSGRVSHAWELVDDVIFI 381
++IDG K+GR A L ++ ++
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYL 438
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 82/171 (47%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D+A+++F + + + +N +L+ K+ A+ + ++ GI D+ T L
Sbjct: 426 DEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNAL 485
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
+ Y Q + V ++ + P+ +T++TL+ G G + A++ + G
Sbjct: 486 LGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGL 545
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCK 189
R D V Y LI+ LCK G +A+ L+ ++ + + P+V Y II +F +
Sbjct: 546 RADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/245 (17%), Positives = 106/245 (43%), Gaps = 21/245 (8%)
Query: 15 IRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFT 74
+ +++A+ I + + ++ +N +L K Y + ++ + P++ T
Sbjct: 457 VGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLT 516
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
+ LI+ Y A + + G R D + ++ L+ LC NG V +A+ D +
Sbjct: 517 YSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMT 576
Query: 135 AQGFRLDQVTYRILINGLCKMGQ---------------TRAALQLMRQIQG-QLVKPDVE 178
+G + VTY +I+ + + +AL + + +G ++++ +
Sbjct: 577 KEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQ 636
Query: 179 MYTIIIHSFCKD-----KLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATK 233
+ T + KD + +S ++ +M + P+V T++A++ + ++A+
Sbjct: 637 LTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASM 696
Query: 234 LLDEM 238
LL+E+
Sbjct: 697 LLEEL 701
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 181/360 (50%), Gaps = 1/360 (0%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
AV F +++ P ++ + ++ L + A+ + + + +G+SPD L+
Sbjct: 133 AVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVV 192
Query: 81 CYCNQAQITSAFSVLAKILKRGY-RPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
C+ ++ A+ ++A+ +K + T+ + L+ G C G+++ A ++ G
Sbjct: 193 GLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCE 252
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
D VTY +L+N + A +M ++ ++ D Y ++ C+ YN
Sbjct: 253 PDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNF 312
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+ + R DV +Y+ LI FC S ++A +L +EM K + + T+ L+ A +
Sbjct: 313 MVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLR 372
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
EGN AK +L M + G+ PD I Y +++D C V+KA +FN M + I P+ S
Sbjct: 373 EGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAIS 432
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
Y+ +I+GLC++ +V EA+ L +M K PD +T+ +I GL + ++S A+++ D ++
Sbjct: 433 YNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMM 492
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 176/360 (48%), Gaps = 3/360 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D+AV +F+ + S ++N+ + LV+ + A ++ + G S FT +
Sbjct: 26 DNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRF 85
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ C + ++L+ + G+ PD F + LC +V A+Q +V +G
Sbjct: 86 ISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGR 145
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D V+Y ILINGL + G+ A+++ + V PD + ++ C + V AY
Sbjct: 146 EPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYE 205
Query: 199 LYSEML-ARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
+ +E + + RV YNALI GFC ++++A L M PD T+N+L++
Sbjct: 206 MVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYY 265
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKD-IFNSMPQRGIAPN 316
+K A+ V+A M++ G++ D +YN L+ +C VS +K + + M RG +
Sbjct: 266 YDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-D 324
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
V SYS +I C+ +A L EM K ++ + VTY+SLI + G S A +L+D
Sbjct: 325 VVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLD 384
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 134/279 (48%), Gaps = 2/279 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+ A ++ + + ++ P ++ +N +L A + ++ +GI D ++ L
Sbjct: 237 EKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQL 296
Query: 79 INCYCNQAQITSAFSVLAKILK-RGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
+ +C + ++ + K ++ RG+ D ++++TL++ C + A + + + +G
Sbjct: 297 LKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETFCRASNTRKAYRLFEEMRQKG 355
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
++ VTY LI + G + A +L+ Q+ + PD YT I+ CK V AY
Sbjct: 356 MVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAY 415
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
++++M+ + PD +YN+LI G C ++ EA KL ++M K PD TF ++ L
Sbjct: 416 GVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGL 475
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVS 296
+ + A V MM +G D ++L+ C +S
Sbjct: 476 IRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCSMS 514
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 121/236 (51%), Gaps = 5/236 (2%)
Query: 142 QVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYS 201
++ YR I L K G A+Q+ +++ + Y I ++ A +Y
Sbjct: 9 RLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYW 68
Query: 202 EM--LARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+M + ++P FTY+ I G C V + LL +M T PD + FN+ +D L +
Sbjct: 69 DMKPMGFSLIP--FTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCR 126
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
E V A M+++G +PD+++Y L++G +V A +I+N+M + G++P+ +
Sbjct: 127 ENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKA 186
Query: 320 YSIMINGLCKTKKVDEALNLLA-EMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
+ ++ GLC +KVD A ++A E+ + TV Y++LI G CK+GR+ A L
Sbjct: 187 CAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEAL 242
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 132/290 (45%), Gaps = 2/290 (0%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
+N +++ K A +L + G PD+ T +L+N Y + + A V+A+++
Sbjct: 223 YNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMV 282
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFH-DHVVAQGFRLDQVTYRILINGLCKMGQT 158
+ G + D ++ L+K C F + +GF D V+Y LI C+ T
Sbjct: 283 RSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETFCRASNT 341
Query: 159 RAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNAL 218
R A +L +++ + + +V YT +I +F ++ S A L +M + PD Y +
Sbjct: 342 RKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTI 401
Query: 219 IYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGV 278
+ C + +A + ++M+ I PDA ++N L+ L + G V EA + M +
Sbjct: 402 LDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKEC 461
Query: 279 KPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLC 328
PD +T+ ++ G +++ A +++ M +G + +I C
Sbjct: 462 CPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 144/331 (43%), Gaps = 38/331 (11%)
Query: 85 QAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVT 144
I +A V ++ YR + + + L + + A + + GF L T
Sbjct: 22 SGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFT 81
Query: 145 YRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEML 204
Y I+GLCK+ + L+ ++ PD+ + + + C++ V A + M+
Sbjct: 82 YSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMV 141
Query: 205 ARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD------------------ 246
R PDV +Y LI G ++ +A ++ + M+ + PD
Sbjct: 142 QRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVD 201
Query: 247 -AY-----------------TFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSL 288
AY +N L+ K G +++A+ + + M K G +PD++TYN L
Sbjct: 202 LAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVL 261
Query: 289 MDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLA-EMDCKN 347
++ Y + + +A+ + M + GI + +SY+ ++ C+ D+ N + EM+ +
Sbjct: 262 LNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRG 321
Query: 348 IIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
D V+YS+LI+ C++ A+ L +++
Sbjct: 322 FC-DVVSYSTLIETFCRASNTRKAYRLFEEM 351
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%)
Query: 180 YTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMV 239
Y I + K ++ +A ++ EM F YN I S+ + A + +M
Sbjct: 12 YRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMK 71
Query: 240 TKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVN 299
+T++ + L K +L+ M G PDI +N +D C ++V
Sbjct: 72 PMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVG 131
Query: 300 KAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLI 359
A F M QRG P+V SY+I+INGL + KV +A+ + M + PD ++L+
Sbjct: 132 FAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALV 191
Query: 360 DGLCKSGRVSHAWELVDDVI 379
GLC + +V A+E+V + I
Sbjct: 192 VGLCHARKVDLAYEMVAEEI 211
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 83/172 (48%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N A +F + + ++ + ++ + ++ + A L Q+ G+SPD T
Sbjct: 340 NTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYT 399
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
+++ C + A+ V +++ PD I++ +L+ GLC +G+V A++ + + +
Sbjct: 400 TILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGK 459
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFC 188
D++T++ +I GL + + AA ++ Q+ + D ++ +I + C
Sbjct: 460 ECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 63/139 (45%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N+ A + +++ + +P I + IL L K + A + + + I+PD +
Sbjct: 375 NSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYN 434
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
LI+ C ++T A + + + PD +TF ++ GL ++ A + D ++ +
Sbjct: 435 SLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDK 494
Query: 137 GFRLDQVTYRILINGLCKM 155
GF LD+ LI C M
Sbjct: 495 GFTLDRDVSDTLIKASCSM 513
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 178/361 (49%), Gaps = 1/361 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++ + ++ ++ P + +N ++ LV +A + ++ I PDI T +
Sbjct: 204 EELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTM 263
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I YC Q A L + RG+ D IT+ T+++ + + + + + +G
Sbjct: 264 IKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGI 323
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
++ + ++I GLCK G+ + + + KP+V +YT++I + K V DA
Sbjct: 324 QVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIR 383
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L M+ PDV TY+ ++ G C +++EA + ++ ++ L+D LG
Sbjct: 384 LLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLG 443
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM-PQRGIAPNV 317
K G V EA+ + M ++G D YN+L+D + +V++A +F M + G V
Sbjct: 444 KAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTV 503
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDD 377
++Y+I+++G+ K + +EAL L M K I P + +L GLC SG+V+ A +++D+
Sbjct: 504 YTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDE 563
Query: 378 V 378
+
Sbjct: 564 L 564
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 157/330 (47%), Gaps = 15/330 (4%)
Query: 42 KILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKR 101
+ ++S +K +P +S ++ L I + + V K+ +
Sbjct: 172 RFVSSEIKKFEFPMTVSAANAL---------------IKSFGKLGMVEELLWVWRKMKEN 216
Query: 102 GYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAA 161
G P T+ LM GL V +A + + + + + D VTY +I G CK GQT+ A
Sbjct: 217 GIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKA 276
Query: 162 LQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYG 221
++ +R ++ + + D Y +I + D LY EM + + ++ +I G
Sbjct: 277 MEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGG 336
Query: 222 FCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPD 281
C +L E + + M+ K P+ + +L+D K G+V++A +L M+ +G KPD
Sbjct: 337 LCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPD 396
Query: 282 IITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLA 341
++TY+ +++G C V +A D F++ G+A N YS +I+GL K +VDEA L
Sbjct: 397 VVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFE 456
Query: 342 EMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
EM K D+ Y++LID K +V A
Sbjct: 457 EMSEKGCTRDSYCYNALIDAFTKHRKVDEA 486
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 146/320 (45%), Gaps = 2/320 (0%)
Query: 22 VSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINC 81
V+++ + P F+ ++ L K ++ + G P++ T+LI+
Sbjct: 312 VALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDG 371
Query: 82 YCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLD 141
Y + A +L +++ G++PD +T++ ++ GLC NG+V+ AL + G ++
Sbjct: 372 YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAIN 431
Query: 142 QVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYS 201
+ Y LI+GL K G+ A +L ++ + D Y +I +F K + V +A L+
Sbjct: 432 SMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFK 491
Query: 202 EMLARRVLPD-VFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
M V+TY L+ G + +EA KL D M+ K I P A F L L
Sbjct: 492 RMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLS 551
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSY 320
G V A +L + GV D + +++ C + +A + + + +RG
Sbjct: 552 GKVARACKILDELAPMGVILDAACED-MINTLCKAGRIKEACKLADGITERGREVPGRIR 610
Query: 321 SIMINGLCKTKKVDEALNLL 340
++MIN L K K D A+ L+
Sbjct: 611 TVMINALRKVGKADLAMKLM 630
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 35/199 (17%)
Query: 216 NALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMK 275
NALI F + ++E + +M I P YT+N L++ L V A+ V VM
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 276 QGVKPDIITYNSLMDGYCLVSEVNKAKD-------------------------------- 303
+KPDI+TYN+++ GYC + KA +
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 310
Query: 304 ---IFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLID 360
++ M ++GI H++S++I GLCK K++E + M K P+ Y+ LID
Sbjct: 311 CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLID 370
Query: 361 GLCKSGRVSHAWELVDDVI 379
G KSG V A L+ +I
Sbjct: 371 GYAKSGSVEDAIRLLHRMI 389
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 176/364 (48%), Gaps = 4/364 (1%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+ A + + M P+P + +N ++ L + + A+ L + ++ GI P+ T I+
Sbjct: 173 EKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNII 232
Query: 79 INCYCNQAQI-TSAFSVLAKIL--KRGYRP-DTITFTTLMKGLCLNGQVQTALQFHDHVV 134
++ C + I + +L +IL + P D + T LM NG V AL+ +
Sbjct: 233 VHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMS 292
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
+ D V Y ++I GLC G AA M + + V PDV Y +I + CK+
Sbjct: 293 QKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFD 352
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
+A +L+ M V PD +Y +I G CI + A + L M+ ++ P+ +N+++
Sbjct: 353 EACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVI 412
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
D G+ G+ A +VL +M+ GVKP++ T N+L+ GY + A + N M I
Sbjct: 413 DGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIH 472
Query: 315 PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
P+ +Y++++ C + A L EM + PD +TY+ L+ GLC GR+ A L
Sbjct: 473 PDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESL 532
Query: 375 VDDV 378
+ +
Sbjct: 533 LSRI 536
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 173/340 (50%), Gaps = 4/340 (1%)
Query: 43 ILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRG 102
I+ L A+ L ++ ++G+ P + T L+N C I A ++ ++ + G
Sbjct: 127 IMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMG 186
Query: 103 YRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQ-TRAA 161
P+ +++ TL+KGLC V AL + + G R ++VT I+++ LC+ G
Sbjct: 187 PSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNN 246
Query: 162 LQLMRQI--QGQLVKP-DVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNAL 218
+L+ +I Q P D+ + TI++ S K+ V A ++ EM + V D YN +
Sbjct: 247 KKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVI 306
Query: 219 IYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGV 278
I G C + A + +MV + ++PD +T+N L+ AL KEG EA + M GV
Sbjct: 307 IRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGV 366
Query: 279 KPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALN 338
PD I+Y ++ G C+ +VN+A + SM + + P V ++++I+G + AL+
Sbjct: 367 APDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALS 426
Query: 339 LLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+L M + P+ T ++LI G K GR+ AW + +++
Sbjct: 427 VLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEM 466
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 173/366 (47%), Gaps = 6/366 (1%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A+ + +++ P +I N +L L K + A L ++ G SP+ + L
Sbjct: 138 DAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTL 197
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQV-----QTALQFHDHV 133
I C+ + A + + K G RP+ +T ++ LC G + + + D
Sbjct: 198 IKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSS 257
Query: 134 VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLV 193
A LD V IL++ K G AL++ +++ + V D +Y +II C +
Sbjct: 258 QANA-PLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNM 316
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
AY +M+ R V PDVFTYN LI C + EA L M + PD ++ ++
Sbjct: 317 VAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVI 376
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
+ L G+V A L M+K + P+++ +N ++DGY + + A + N M G+
Sbjct: 377 IQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGV 436
Query: 314 APNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWE 373
PNV++ + +I+G K ++ +A + EM I PDT TY+ L+ C G + A++
Sbjct: 437 KPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQ 496
Query: 374 LVDDVI 379
L D+++
Sbjct: 497 LYDEML 502
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 151/294 (51%)
Query: 43 ILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRG 102
++ S K + A+ + ++ + D ++I C+ + +A+ + ++KRG
Sbjct: 271 LMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRG 330
Query: 103 YRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAAL 162
PD T+ TL+ LC G+ A H + G DQ++Y+++I GLC G A
Sbjct: 331 VNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRAN 390
Query: 163 QLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGF 222
+ + + + P+V ++ ++I + + S A ++ + ML+ V P+V+T NALI+G+
Sbjct: 391 EFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGY 450
Query: 223 CIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDI 282
+L +A + +EM + IHPD T+N+L+ A G+++ A + M+++G +PDI
Sbjct: 451 VKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDI 510
Query: 283 ITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEA 336
ITY L+ G C + KA+ + + + GI + + I+ + ++ EA
Sbjct: 511 ITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEA 564
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 131/268 (48%), Gaps = 4/268 (1%)
Query: 111 TTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQG 170
+++M+ LCL G++ AL ++ G +T+ L+NGLCK G A L+R+++
Sbjct: 125 SSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE 184
Query: 171 QLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKE 230
P+ Y +I C V A L++ M + P+ T N +++ C +
Sbjct: 185 MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGN 244
Query: 231 AT-KLLDEMVTK---NIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYN 286
KLL+E++ N D IL+D+ K GNV +A V M ++ V D + YN
Sbjct: 245 NNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYN 304
Query: 287 SLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCK 346
++ G C + A M +RG+ P+V +Y+ +I+ LCK K DEA +L M
Sbjct: 305 VIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNG 364
Query: 347 NIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
+ PD ++Y +I GLC G V+ A E
Sbjct: 365 GVAPDQISYKVIIQGLCIHGDVNRANEF 392
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 39/237 (16%)
Query: 177 VEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLD 236
+ +++ I+ C + A L +M+ V+P + T+N L+ G C +++A L+
Sbjct: 121 LSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVR 180
Query: 237 EMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYC--- 293
EM P+ ++N L+ L NV +A + M K G++P+ +T N ++ C
Sbjct: 181 EMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKG 240
Query: 294 --------LVSE----------------------------VNKAKDIFNSMPQRGIAPNV 317
L+ E V +A +++ M Q+ + +
Sbjct: 241 VIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADS 300
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
Y+++I GLC + + A + +M + + PD TY++LI LCK G+ A +L
Sbjct: 301 VVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDL 357
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 88/173 (50%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P ++ +N ++ + +A+S+ + + G+ P+++T LI+ Y ++ A+ V
Sbjct: 403 PEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWV 462
Query: 95 LAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCK 154
++ PDT T+ L+ C G ++ A Q +D ++ +G + D +TY L+ GLC
Sbjct: 463 KNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCW 522
Query: 155 MGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARR 207
G+ + A L+ +IQ + D + I+ + + + +AY +Y + LA R
Sbjct: 523 KGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWLATR 575
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 188/397 (47%), Gaps = 37/397 (9%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
DA+ + + R P ++ N + V+ A+ ++ GI P++ T +I
Sbjct: 260 DALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMI 319
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ-GF 138
YC+ ++ A +L + +G PD +++ T+M LC ++ + + G
Sbjct: 320 RGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGL 379
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
DQVTY LI+ L K AL ++ Q + + D Y+ I+H+ CK+ +S+A +
Sbjct: 380 VPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKD 439
Query: 199 LYSEMLAR-RVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKN--------------- 242
L +EML++ PDV TY A++ GFC + ++ +A KLL M T
Sbjct: 440 LINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGM 499
Query: 243 --------------------IHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDI 282
P++ T+++++ L +EG + EA V+ M+ +G P
Sbjct: 500 CRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGP 559
Query: 283 ITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAE 342
+ N L+ C ++A+ +G A NV +++ +I+G C+ ++D AL++L +
Sbjct: 560 VEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDD 619
Query: 343 MDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
M N D TY++L+D L K GR++ A EL+ ++
Sbjct: 620 MYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKML 656
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 162/314 (51%), Gaps = 4/314 (1%)
Query: 69 SPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQ 128
+P+ F+ ++ Y Q+ A VL + + G P+ + T + +++ AL+
Sbjct: 241 TPEAFSRVMV--SYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALR 298
Query: 129 FHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFC 188
F + + G + VTY +I G C + + A++L+ + + PD Y I+ C
Sbjct: 299 FLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLC 358
Query: 189 KDKLVSDAYNLYSEMLARRVL-PDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDA 247
K+K + + +L +M L PD TYN LI+ EA L + K D
Sbjct: 359 KEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDK 418
Query: 248 YTFNILVDALGKEGNVKEAKTVLAVMMKQG-VKPDIITYNSLMDGYCLVSEVNKAKDIFN 306
++ +V AL KEG + EAK ++ M+ +G PD++TY ++++G+C + EV+KAK +
Sbjct: 419 LGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQ 478
Query: 307 SMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
M G PN SY+ ++NG+C+T K EA ++ + P+++TYS ++ GL + G
Sbjct: 479 VMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREG 538
Query: 367 RVSHAWELVDDVIF 380
++S A ++V +++
Sbjct: 539 KLSEACDVVREMVL 552
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 174/342 (50%), Gaps = 2/342 (0%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
F++++ S + A+ + + G+ P++ I+ + ++ A L ++
Sbjct: 245 FSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQ 304
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
G P+ +T+ +++G C +V+ A++ + + ++G D+V+Y ++ LCK +
Sbjct: 305 VVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIV 364
Query: 160 AALQLMRQIQGQL-VKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNAL 218
LM+++ + + PD Y +IH K +A + + D Y+A+
Sbjct: 365 EVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAI 424
Query: 219 IYGFCIVSQLKEATKLLDEMVTK-NIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQG 277
++ C ++ EA L++EM++K + PD T+ +V+ + G V +AK +L VM G
Sbjct: 425 VHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHG 484
Query: 278 VKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEAL 337
KP+ ++Y +L++G C + +A+++ N + +PN +YS++++GL + K+ EA
Sbjct: 485 HKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEAC 544
Query: 338 NLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+++ EM K P V + L+ LC+ GR A + +++ +
Sbjct: 545 DVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECL 586
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 165/328 (50%), Gaps = 3/328 (0%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTG-ISPDIFTLTILINCYCNQAQITSAFSVLAKI 98
++ I+ +L K A L +++ G PD+ T T ++N +C ++ A +L +
Sbjct: 421 YSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVM 480
Query: 99 LKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQT 158
G++P+T+++T L+ G+C G+ A + + + + +TY ++++GL + G+
Sbjct: 481 HTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKL 540
Query: 159 RAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNAL 218
A ++R++ + P +++ S C+D +A E L + +V + +
Sbjct: 541 SEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTV 600
Query: 219 IYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGV 278
I+GFC +L A +LD+M N H D +T+ LVD LGK+G + EA ++ M+ +G+
Sbjct: 601 IHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGI 660
Query: 279 KPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALN 338
P +TY +++ YC + +V+ I M R + Y+ +I LC K++EA
Sbjct: 661 DPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGKLEEADT 718
Query: 339 LLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
LL ++ D T +L++G K G
Sbjct: 719 LLGKVLRTASRSDAKTCYALMEGYLKKG 746
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 183/419 (43%), Gaps = 46/419 (10%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+ A+ R+ + P ++ +N ++ + AI L + G PD + +
Sbjct: 294 EKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTI 353
Query: 79 INCYCNQAQITSAFSVLAKILKR-GYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
+ C + +I ++ K+ K G PD +T+ TL+ L + AL F +G
Sbjct: 354 MGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKG 413
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQI--QGQLVKPDVEMYTIIIHSFCKDKLVSD 195
FR+D++ Y +++ LCK G+ A L+ ++ +G PDV YT +++ FC+ V
Sbjct: 414 FRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGH-CPPDVVTYTAVVNGFCRLGEVDK 472
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQ---------------------------- 227
A L M P+ +Y AL+ G C +
Sbjct: 473 AKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMH 532
Query: 228 -------LKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKP 280
L EA ++ EMV K P N+L+ +L ++G EA+ + + +G
Sbjct: 533 GLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAI 592
Query: 281 DIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLL 340
+++ + +++ G+C E++ A + + M +V +Y+ +++ L K ++ EA L+
Sbjct: 593 NVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELM 652
Query: 341 AEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVIFIFNVWMSYAKAIKLTRQLL 399
+M K I P VTY ++I C+ G+ VDD++ I +S K + Q++
Sbjct: 653 KKMLHKGIDPTPVTYRTVIHRYCQMGK-------VDDLVAILEKMISRQKCRTIYNQVI 704
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 159/312 (50%), Gaps = 39/312 (12%)
Query: 103 YRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG-FRLDQVTYRILINGLCKMGQTRAA 161
YR D + + ++++ L Q + + + +G +R + R++++ + GQ R A
Sbjct: 203 YRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVS-YSRAGQLRDA 261
Query: 162 LQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYG 221
L+++ +Q V+P++ + I F + + A M ++P+V TYN +I G
Sbjct: 262 LKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRG 321
Query: 222 FCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQ-GVKP 280
+C + +++EA +LL++M +K PD ++ ++ L KE + E + ++ M K+ G+ P
Sbjct: 322 YCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVP 381
Query: 281 DIITYNSLMD----------------------------GY-------CLVSEVNKAKDIF 305
D +TYN+L+ GY C +++AKD+
Sbjct: 382 DQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLI 441
Query: 306 NSMPQRG-IAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCK 364
N M +G P+V +Y+ ++NG C+ +VD+A LL M P+TV+Y++L++G+C+
Sbjct: 442 NEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCR 501
Query: 365 SGRVSHAWELVD 376
+G+ A E+++
Sbjct: 502 TGKSLEAREMMN 513
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 159/357 (44%), Gaps = 3/357 (0%)
Query: 20 DAVSIFNRLLRMSPTPP-IIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+A + N +L PP ++ + ++ ++ A L + G P+ + T L
Sbjct: 436 EAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTAL 495
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
+N C + A ++ + + P++IT++ +M GL G++ A +V +GF
Sbjct: 496 LNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGF 555
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
V +L+ LC+ G+T A + M + + +V +T +IH FC++ + A +
Sbjct: 556 FPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALS 615
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
+ +M DVFTY L+ ++ EAT+L+ +M+ K I P T+ ++
Sbjct: 616 VLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYC 675
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
+ G V + +L M+ + I YN +++ C++ ++ +A + + + +
Sbjct: 676 QMGKVDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAK 733
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
+ ++ G K A + M +N+IPD L L G+V A +L+
Sbjct: 734 TCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLM 790
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 129/284 (45%), Gaps = 3/284 (1%)
Query: 34 TPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFS 93
+P I ++ I+ L + A + ++ G P + +L+ C + A
Sbjct: 521 SPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARK 580
Query: 94 VLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLC 153
+ + L +G + + FTT++ G C N ++ AL D + D TY L++ L
Sbjct: 581 FMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLG 640
Query: 154 KMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVF 213
K G+ A +LM+++ + + P Y +IH +C+ V D + +M++R+ +
Sbjct: 641 KKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI- 699
Query: 214 TYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVM 273
YN +I C++ +L+EA LL +++ DA T L++ K+G A V M
Sbjct: 700 -YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRM 758
Query: 274 MKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG-IAPN 316
+ + PD+ L L +V++A + + +RG I+P
Sbjct: 759 FNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISPQ 802
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 67/133 (50%)
Query: 246 DAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIF 305
D + +++ L K + ++ VL +M ++G+ ++ +M Y ++ A +
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 306 NSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKS 365
M + G+ PN+ + I+ + ++++AL L M I+P+ VTY+ +I G C
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325
Query: 366 GRVSHAWELVDDV 378
RV A EL++D+
Sbjct: 326 HRVEEAIELLEDM 338
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 186/362 (51%), Gaps = 1/362 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A S + + P ++ +N ++ + +MK+ A S+ ++ G+ P+ FT +IL
Sbjct: 466 DAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSIL 525
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG- 137
I+ + +A+ V+ ++ + + + + T++ GLC GQ A + +++ +
Sbjct: 526 IDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKR 585
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
+ + +Y +I+G K+G T +A++ R++ P+V +T +I+ FCK + A
Sbjct: 586 YSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLAL 645
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
+ EM + + D+ Y ALI GFC + +K A L E+ + P+ +N L+
Sbjct: 646 EMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGF 705
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
G + A + M+ G+ D+ TY +++DG +N A D+++ + GI P+
Sbjct: 706 RNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDE 765
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDD 377
+ +++NGL K + +A +L EM K++ P+ + YS++I G + G ++ A+ L D+
Sbjct: 766 ILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDE 825
Query: 378 VI 379
++
Sbjct: 826 ML 827
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 192/403 (47%), Gaps = 39/403 (9%)
Query: 15 IRNA--DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDI 72
IRN D AV F ++ P + N +L+SLV+ A + +++ G++ D
Sbjct: 180 IRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDN 239
Query: 73 FTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCL------------- 119
T +L+ + + A + +++ RG PD + F+ ++ C
Sbjct: 240 VTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLRE 299
Query: 120 -----------------------NGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMG 156
G ++ A++ D +V G + + L+NG CK
Sbjct: 300 MRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGN 359
Query: 157 QTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYN 216
+ AL L +++ + + PD M+++++ FCK+ + A Y M + R+ P +
Sbjct: 360 ELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVH 419
Query: 217 ALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQ 276
+I G C+ ++ EA + ++ + N + K+G V A + L +M ++
Sbjct: 420 TMIQG-CLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQK 478
Query: 277 GVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEA 336
G++P+++ YN++M +C + ++ A+ IF+ M ++G+ PN +YSI+I+G K K A
Sbjct: 479 GIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNA 538
Query: 337 LNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+++ +M+ N + V Y+++I+GLCK G+ S A E++ ++I
Sbjct: 539 WDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLI 581
Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 190/368 (51%), Gaps = 12/368 (3%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N ++AV + + ++ +I ++ K A+ L ++++ G++PD +
Sbjct: 325 NMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFS 384
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQV-QTALQ-FHDHV- 133
+++ +C ++ A ++ P ++ T+++G CL + + AL+ F+D
Sbjct: 385 VMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG-CLKAESPEAALEIFNDSFE 443
Query: 134 --VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDK 191
+A GF +++ L+ CK G+ AA ++ ++ + ++P+V Y ++ + C+ K
Sbjct: 444 SWIAHGFMCNKI---FLL--FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMK 498
Query: 192 LVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFN 251
+ A +++SEML + + P+ FTY+ LI GF + A ++++M N + +N
Sbjct: 499 NMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYN 558
Query: 252 ILVDALGKEGNVKEAKTVLAVMMKQG-VKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQ 310
+++ L K G +AK +L ++K+ +YNS++DG+ V + + A + + M +
Sbjct: 559 TIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSE 618
Query: 311 RGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSH 370
G +PNV +++ +ING CK+ ++D AL + EM + D Y +LIDG CK +
Sbjct: 619 NGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKT 678
Query: 371 AWELVDDV 378
A+ L ++
Sbjct: 679 AYTLFSEL 686
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 172/348 (49%), Gaps = 1/348 (0%)
Query: 15 IRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFT 74
++N D A SIF+ +L P ++ ++ K K A + +Q++ + +
Sbjct: 497 MKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVI 556
Query: 75 LTILINCYCNQAQITSAFSVLAKILK-RGYRPDTITFTTLMKGLCLNGQVQTALQFHDHV 133
+IN C Q + A +L ++K + Y ++ +++ G G +A++ + +
Sbjct: 557 YNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREM 616
Query: 134 VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLV 193
G + VT+ LING CK + AL++ +++ +K D+ Y +I FCK +
Sbjct: 617 SENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDM 676
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
AY L+SE+ ++P+V YN+LI GF + ++ A L +MV I D +T+ +
Sbjct: 677 KTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTM 736
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
+D L K+GN+ A + + ++ G+ PD I + L++G + KA + M ++ +
Sbjct: 737 IDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDV 796
Query: 314 APNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDG 361
PNV YS +I G + ++EA L EM K I+ D ++ L+ G
Sbjct: 797 TPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 142/323 (43%), Gaps = 41/323 (12%)
Query: 68 ISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTAL 127
++P F L+N Y ++ A ++ R P ++ L + + A
Sbjct: 167 LTPRAFNY--LLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAK 224
Query: 128 QFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSF 187
+ ++ +V G D VT ++L+ + + A+++ R++ + +PD ++++ + +
Sbjct: 225 EIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAA 284
Query: 188 CKDKLVSDAYNLYSEMLARRVLP-DVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
CK + A +L EM + +P TY ++I F ++EA +++DEMV
Sbjct: 285 CKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVG------ 338
Query: 247 AYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFN 306
G+ +I SL++GYC +E+ KA D+FN
Sbjct: 339 -----------------------------FGIPMSVIAATSLVNGYCKGNELGKALDLFN 369
Query: 307 SMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
M + G+AP+ +S+M+ CK ++++A+ M I P +V ++I G K+
Sbjct: 370 RMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAE 429
Query: 367 RVSHAWELVDDVIFIFNVWMSYA 389
A E+ +D F W+++
Sbjct: 430 SPEAALEIFNDS---FESWIAHG 449
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 4/195 (2%)
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
S+ + P F Y L+ + ++ A MV + + P N ++ +L +
Sbjct: 160 SKRFGFELTPRAFNY--LLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRS 217
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSY 320
+ EAK + M+ GV D +T LM + +A IF + RG P+ +
Sbjct: 218 NLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLF 277
Query: 321 SIMINGLCKTKKVDEALNLLAEMDCKNIIPDT-VTYSSLIDGLCKSGRVSHAWELVDDVI 379
S+ + CKT + AL+LL EM K +P + TY+S+I K G + A ++D+++
Sbjct: 278 SLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMV 337
Query: 380 FIFNVWMSYAKAIKL 394
F + MS A L
Sbjct: 338 G-FGIPMSVIAATSL 351
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 185/361 (51%), Gaps = 3/361 (0%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A+ +F+ + P ++ N +L++LV+ A+ + Q+ +SPD+FT +I++
Sbjct: 173 NALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVV 232
Query: 80 NCYCNQAQITSAFSVLAKILKR--GYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
N YC + A V AK + G + +T+ +L+ G + G V+ + + +G
Sbjct: 233 NAYCRSGNVDKAM-VFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERG 291
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
+ VTY LI G CK G A + ++ + + D MY +++ +C+ + DA
Sbjct: 292 VSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAV 351
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
++ M+ V + N+LI G+C QL EA ++ M ++ PD +T+N LVD
Sbjct: 352 RVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGY 411
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
+ G V EA + M ++ V P ++TYN L+ GY + + ++ M +RG+ +
Sbjct: 412 CRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADE 471
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDD 377
S S ++ L K +EA+ L + + ++ DT+T + +I GLCK +V+ A E++D+
Sbjct: 472 ISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDN 531
Query: 378 V 378
V
Sbjct: 532 V 532
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 163/341 (47%), Gaps = 35/341 (10%)
Query: 67 GISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA 126
G+S ++ T T LI YC + + A V + ++ D + LM G C GQ++ A
Sbjct: 291 GVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDA 350
Query: 127 LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS 186
++ HD+++ G R + LING CK GQ A Q+ ++ +KPD Y ++
Sbjct: 351 VRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDG 410
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
+C+ V +A L +M + V+P V TYN L+ G+ + + L M+ + ++ D
Sbjct: 411 YCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNAD 470
Query: 247 AYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFN 306
+ + L++AL K G+ EA + ++ +G+ D IT N ++ G C + +VN+AK+I +
Sbjct: 471 EISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILD 530
Query: 307 S-----------------------------------MPQRGIAPNVHSYSIMINGLCKTK 331
+ M ++GI P + Y+ +I+G K +
Sbjct: 531 NVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYR 590
Query: 332 KVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAW 372
+++ +L+ E+ + + P TY +LI G C G + A+
Sbjct: 591 HLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAY 631
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 146/276 (52%), Gaps = 1/276 (0%)
Query: 105 PDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ-GFRLDQVTYRILINGLCKMGQTRAALQ 163
PD T + ++ C +G V A+ F + G L+ VTY LING +G +
Sbjct: 223 PDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTR 282
Query: 164 LMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFC 223
++R + + V +V YT +I +CK L+ +A +++ + ++++ D Y L+ G+C
Sbjct: 283 VLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYC 342
Query: 224 IVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDII 283
Q+++A ++ D M+ + + N L++ K G + EA+ + + M +KPD
Sbjct: 343 RTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHH 402
Query: 284 TYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM 343
TYN+L+DGYC V++A + + M Q+ + P V +Y+I++ G + + L+L M
Sbjct: 403 TYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMM 462
Query: 344 DCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+ + D ++ S+L++ L K G + A +L ++V+
Sbjct: 463 LKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVL 498
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 146/313 (46%)
Query: 67 GISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA 126
G+ + LIN YC Q+ A + +++ +PD T+ TL+ G C G V A
Sbjct: 361 GVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEA 420
Query: 127 LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS 186
L+ D + + +TY IL+ G ++G L L + + + V D + ++ +
Sbjct: 421 LKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEA 480
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
K ++A L+ +LAR +L D T N +I G C + ++ EA ++LD + P
Sbjct: 481 LFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPA 540
Query: 247 AYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFN 306
T+ L K GN+KEA V M ++G+ P I YN+L+ G +NK D+
Sbjct: 541 VQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVI 600
Query: 307 SMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
+ RG+ P V +Y +I G C +D+A EM K I + S + + L +
Sbjct: 601 ELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLD 660
Query: 367 RVSHAWELVDDVI 379
++ A L+ ++
Sbjct: 661 KIDEACLLLQKIV 673
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 186/435 (42%), Gaps = 74/435 (17%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D+A+ + +++ + P ++ +N +L ++ + +SL + G++ D + + L
Sbjct: 418 DEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTL 477
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
+ A + +L RG DTIT ++ GLC +V A + D+V
Sbjct: 478 LEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRC 537
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ TY+ L +G K+G + A + ++ + + P +EMY +I K + ++ +
Sbjct: 538 KPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVAD 597
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L E+ AR + P V TY ALI G+C + + +A EM+ K I + + + ++L
Sbjct: 598 LVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLF 657
Query: 259 KEGNVKEAKTVLAVMM--------------------------------------KQGVKP 280
+ + EA +L ++ K+ + P
Sbjct: 658 RLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVP 717
Query: 281 DIITYNSLMDGYCLVSEVNKAKDIF----------------------------------- 305
+ I YN + G C ++ A+ +F
Sbjct: 718 NNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTL 777
Query: 306 -NSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCK 364
+ M +GI PN+ +Y+ +I GLCK VD A LL ++ K I P+ +TY++LIDGL K
Sbjct: 778 RDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVK 837
Query: 365 SGRVSHAWELVDDVI 379
SG V+ A L + +I
Sbjct: 838 SGNVAEAMRLKEKMI 852
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 172/398 (43%), Gaps = 73/398 (18%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A IF+R+ S P +N ++ + + A+ L Q+ + P + T IL+
Sbjct: 384 EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL 443
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
Y S+ +LKRG D I+ +TL++ L G A++ ++V+A+G
Sbjct: 444 KGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL 503
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
D +T ++I+GLCKM + A +++ D N+
Sbjct: 504 TDTITLNVMISGLCKMEKVNEAKEIL-----------------------------DNVNI 534
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+ R P V TY AL +G+ V LKEA + + M K I P +N L+ K
Sbjct: 535 F------RCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFK 588
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
++ + ++ + +G+ P + TY +L+ G+C + ++KA M ++GI NV+
Sbjct: 589 YRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNI 648
Query: 320 YSIMINGLCKTKKVDEALNLLAEM----------------------DC------------ 345
S + N L + K+DEA LL ++ C
Sbjct: 649 CSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVEN 708
Query: 346 ----KNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
K ++P+ + Y+ I GLCK+G++ A +L D++
Sbjct: 709 STPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLL 746
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 162/338 (47%), Gaps = 37/338 (10%)
Query: 15 IRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFT 74
+ N +A ++ + R P I +N +++ K +H L +L G++P + T
Sbjct: 554 VGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVAT 613
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
LI +CN I A++ +++++G TL +C ++ +L
Sbjct: 614 YGALITGWCNIGMIDKAYATCFEMIEKG--------ITLNVNIC--SKIANSL------- 656
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
FRLD++ A L L + + L+ P + + + L +
Sbjct: 657 ---FRLDKID--------------EACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKT 699
Query: 195 D--AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKN-IHPDAYTFN 251
A ++ + + ++P+ YN I G C +L++A KL ++++ + PD YT+
Sbjct: 700 QKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYT 759
Query: 252 ILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQR 311
IL+ G++ +A T+ M +G+ P+I+TYN+L+ G C + V++A+ + + +PQ+
Sbjct: 760 ILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQK 819
Query: 312 GIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNII 349
GI PN +Y+ +I+GL K+ V EA+ L +M K ++
Sbjct: 820 GITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 123/222 (55%), Gaps = 9/222 (4%)
Query: 168 IQGQLVKPDVE------MYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYG 221
+ G+LV+ E ++ +I+ + + LV +A +++ M +P + + N+L+
Sbjct: 140 VWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSN 199
Query: 222 FCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQ--GVK 279
+ A + D+M++ + PD +T +I+V+A + GNV +A V A + G++
Sbjct: 200 LVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKA-MVFAKETESSLGLE 258
Query: 280 PDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNL 339
+++TYNSL++GY ++ +V + M +RG++ NV +Y+ +I G CK ++EA ++
Sbjct: 259 LNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHV 318
Query: 340 LAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVIFI 381
+ K ++ D Y L+DG C++G++ A + D++I I
Sbjct: 319 FELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEI 360
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 165/358 (46%)
Query: 14 SIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIF 73
I + ++A+S+F++ M ++ ++ L K +++ + + + +
Sbjct: 58 EIEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRES 117
Query: 74 TLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHV 133
LI Y + A V KI + TL+ L NG+++ A F D
Sbjct: 118 LFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGA 177
Query: 134 VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLV 193
R + V++ ILI G AA ++ ++ V+P V Y +I C++ +
Sbjct: 178 KDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDM 237
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
A +L +M+ +R+ P+ T+ L+ G C + EA KL+ +M + P + IL
Sbjct: 238 GKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGIL 297
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
+ LGK G + EAK +L M K+ +KPD++ YN L++ C V +A + M +G
Sbjct: 298 MSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGC 357
Query: 314 APNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
PN +Y +MI+G C+ + D LN+L M P T+ ++ GL K G + HA
Sbjct: 358 KPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHA 415
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 132/276 (47%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+ A S F+ M P + FN ++ + + A + ++ + P + T L
Sbjct: 168 EKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSL 227
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I C + A S+L ++K+ RP+ +TF LMKGLC G+ A + + +G
Sbjct: 228 IGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGC 287
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ V Y IL++ L K G+ A L+ +++ + +KPDV +Y I+++ C + V +AY
Sbjct: 288 KPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYR 347
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
+ +EM + P+ TY +I GFC + +L+ M+ P TF +V L
Sbjct: 348 VLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLI 407
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCL 294
K GN+ A VL VM K+ + + +L+ C+
Sbjct: 408 KGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCI 443
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 141/289 (48%)
Query: 90 SAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILI 149
A S+ + + G+R D ++++L+ L + Q V + R + + LI
Sbjct: 64 EALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLI 123
Query: 150 NGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVL 209
K G A+ + +I ++ +I+ + + A + + R+
Sbjct: 124 QHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLR 183
Query: 210 PDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTV 269
P+ ++N LI GF + A K+ DEM+ + P T+N L+ L + ++ +AK++
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSL 243
Query: 270 LAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCK 329
L M+K+ ++P+ +T+ LM G C E N+AK + M RG P + +Y I+++ L K
Sbjct: 244 LEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGK 303
Query: 330 TKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
++DEA LL EM + I PD V Y+ L++ LC RV A+ ++ ++
Sbjct: 304 RGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEM 352
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 132/273 (48%), Gaps = 8/273 (2%)
Query: 124 QTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTII 183
+ AL GFR D +Y LI L K A Q++R ++ + V+ ++ +
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 184 IHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNI 243
I + K V A +++ ++ + + + + N LI +L++A D +
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 244 HPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKD 303
P++ +FNIL+ + + + A V M++ V+P ++TYNSL+ C ++ KAK
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 304 IFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLC 363
+ M ++ I PN ++ +++ GLC + +EA L+ +M+ + P V Y L+ L
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLG 302
Query: 364 KSGRVSHAWELVDDV--------IFIFNVWMSY 388
K GR+ A L+ ++ + I+N+ +++
Sbjct: 303 KRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNH 335
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 174/347 (50%), Gaps = 16/347 (4%)
Query: 34 TPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFS 93
TP FN +++ + K+ A + H + G PD+ + LI+ +C I SA
Sbjct: 53 TPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASL 112
Query: 94 VLAKI-LKRGY--RPDTITFTTLMKGLCLNGQVQTALQFHDHV-VAQGFRL-----DQVT 144
VL + G+ +PD ++F +L G + ++ D V V G L + VT
Sbjct: 113 VLESLRASHGFICKPDIVSFNSLFNGF-------SKMKMLDEVFVYMGVMLKCCSPNVVT 165
Query: 145 YRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEML 204
Y I+ CK G+ + AL+ ++ + P+V +T +I +CK + A +LY EM
Sbjct: 166 YSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMR 225
Query: 205 ARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVK 264
R+ +V TY ALI GFC +++ A ++ MV + P++ + ++D + G+
Sbjct: 226 RVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSD 285
Query: 265 EAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMI 324
A LA M+ QG++ DI Y ++ G C ++ +A +I M + + P++ ++ M+
Sbjct: 286 NAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMM 345
Query: 325 NGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
N K+ ++ A+N+ ++ + PD V S++IDG+ K+G++ A
Sbjct: 346 NAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA 392
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 182/358 (50%), Gaps = 5/358 (1%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A+ F+ + R + +P ++ F ++ K A+SL ++ +S ++ T T LI+
Sbjct: 182 ALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALID 241
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
+C + ++ A + +++++ P+++ +TT++ G G A++F ++ QG RL
Sbjct: 242 GFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRL 301
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
D Y ++I+GLC G+ + A +++ ++ + PD+ ++T +++++ K + A N+Y
Sbjct: 302 DITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMY 361
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
+++ R PDV + +I G QL EA + + YT +L+DAL KE
Sbjct: 362 HKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF---CIEKANDVMYT--VLIDALCKE 416
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSY 320
G+ E + + + + + G+ PD Y S + G C + A + M Q G+ ++ +Y
Sbjct: 417 GDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAY 476
Query: 321 SIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+ +I GL + EA + EM I PD+ + LI K G ++ A +L+ D+
Sbjct: 477 TTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDM 534
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 173/360 (48%), Gaps = 5/360 (1%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
D V ++ ++ +P ++ ++ + + K A+ H + +SP++ T T LI
Sbjct: 146 DEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLI 205
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ YC + A S+ ++ + + +T+T L+ G C G++Q A + + +V
Sbjct: 206 DGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVE 265
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
+ + Y +I+G + G + A++ + ++ Q ++ D+ Y +II C + + +A +
Sbjct: 266 PNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEI 325
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+M ++PD+ + ++ + ++K A + +++ + PD + ++D + K
Sbjct: 326 VEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAK 385
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
G + EA + K + + Y L+D C + + + +F+ + + G+ P+
Sbjct: 386 NGQLHEAIVYFCIE-----KANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFM 440
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
Y+ I GLCK + +A L M + ++ D + Y++LI GL G + A ++ D+++
Sbjct: 441 YTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEML 500
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 176/363 (48%), Gaps = 4/363 (1%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A+ +RL + S P NK + L+ ++ L G +P + ++
Sbjct: 4 EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVV 63
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA-LQFHDHVVAQGF 138
+ C Q+ A ++ + + G PD I++ +L+ G C NG +++A L + GF
Sbjct: 64 SFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGF 123
Query: 139 --RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
+ D V++ L NG KM M + + P+V Y+ I +FCK + A
Sbjct: 124 ICKPDIVSFNSLFNGFSKMKMLDEVFVYM-GVMLKCCSPNVVTYSTWIDTFCKSGELQLA 182
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
+ M + P+V T+ LI G+C L+ A L EM + + T+ L+D
Sbjct: 183 LKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDG 242
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
K+G ++ A+ + + M++ V+P+ + Y +++DG+ + + A M +G+ +
Sbjct: 243 FCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLD 302
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
+ +Y ++I+GLC K+ EA ++ +M+ +++PD V ++++++ KSGR+ A +
Sbjct: 303 ITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYH 362
Query: 377 DVI 379
+I
Sbjct: 363 KLI 365
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 132/262 (50%), Gaps = 5/262 (1%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
++D+A+ ++L I + I++ L A + ++ + + PD+ T
Sbjct: 283 DSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFT 342
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
++N Y ++ +A ++ K+++RG+ PD + +T++ G+ NGQ+ A+ + A
Sbjct: 343 TMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKA- 401
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
+ V Y +LI+ LCK G +L +I + PD MYT I CK + DA
Sbjct: 402 ----NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDA 457
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
+ L + M+ +L D+ Y LIYG + EA ++ DEM+ I PD+ F++L+ A
Sbjct: 458 FKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRA 517
Query: 257 LGKEGNVKEAKTVLAVMMKQGV 278
KEGN+ A +L M ++G+
Sbjct: 518 YEKEGNMAAASDLLLDMQRRGL 539
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 177/398 (44%), Gaps = 47/398 (11%)
Query: 15 IRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFT 74
I D A+ I ++ P I +N I+ +L K H TA+ L + +G PD+ T
Sbjct: 152 IDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVIT 211
Query: 75 LTILINC--------------------------------------YCNQAQITSAFSVLA 96
+I C YC A+ A VL
Sbjct: 212 YNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSAR---AIEVLE 268
Query: 97 KILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCK-- 154
+ G PD +T+ +L+ C G ++ H+++ G L+ VTY L++ LC
Sbjct: 269 DMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHE 328
Query: 155 -MGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVF 213
+ L +M Q P V Y I+I+ CK +L+S A + + +ML ++ LPD+
Sbjct: 329 YWDEVEEILNIMYQTS---YCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIV 385
Query: 214 TYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVM 273
TYN ++ + +A +LL + P T+N ++D L K+G +K+A + M
Sbjct: 386 TYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQM 445
Query: 274 MKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKV 333
+ G+ PD IT SL+ G+C + V +A + RG +Y ++I GLCK K++
Sbjct: 446 LDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEI 505
Query: 334 DEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
+ A+ ++ M PD Y++++ G+ + G S A
Sbjct: 506 EMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEA 543
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 146/293 (49%)
Query: 83 CNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQ 142
C+ ++T A ++ + + P + + L++GL Q+ A+ +V G D
Sbjct: 115 CSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDT 174
Query: 143 VTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSE 202
+TY ++I LCK G R AL L+ + PDV Y +I A + +
Sbjct: 175 ITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKD 234
Query: 203 MLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGN 262
L P + TY L+ C A ++L++M + +PD T+N LV+ + GN
Sbjct: 235 QLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGN 294
Query: 263 VKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSI 322
++E +V+ ++ G++ + +TYN+L+ C ++ ++I N M Q P V +Y+I
Sbjct: 295 LEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNI 354
Query: 323 MINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
+INGLCK + + A++ +M + +PD VTY++++ + K G V A EL+
Sbjct: 355 LINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELL 407
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 169/358 (47%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
DA + + R + P + ++ L ++ A+ + + +G PD T ++I
Sbjct: 122 DACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMII 181
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
C + I +A +L + G PD IT+ T+++ + G + A++F + G
Sbjct: 182 GNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCP 241
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
+TY +L+ +C+ + A++++ + + PD+ Y +++ C+ + + ++
Sbjct: 242 PFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASV 301
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+L+ + + TYN L++ C E ++L+ M + P T+NIL++ L K
Sbjct: 302 IQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCK 361
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
+ A M++Q PDI+TYN+++ V+ A ++ + P + +
Sbjct: 362 ARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLIT 421
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDD 377
Y+ +I+GL K + +AL L +M I PD +T SLI G C++ V A +++ +
Sbjct: 422 YNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKE 479
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 161/349 (46%), Gaps = 5/349 (1%)
Query: 31 MSPTPPIIEF-----NKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQ 85
+S PI E N+IL +L A L + P + + L+
Sbjct: 93 LSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARI 152
Query: 86 AQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTY 145
Q+ A +L ++ G PDTIT+ ++ LC G ++TAL + + G D +TY
Sbjct: 153 DQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITY 212
Query: 146 RILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLA 205
+I + G A++ + P + YT+++ C+ + A + +M
Sbjct: 213 NTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAV 272
Query: 206 RRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKE 265
PD+ TYN+L+ C L+E ++ +++ + + T+N L+ +L E
Sbjct: 273 EGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDE 332
Query: 266 AKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMIN 325
+ +L +M + P +ITYN L++G C +++A D F M ++ P++ +Y+ ++
Sbjct: 333 VEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLG 392
Query: 326 GLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
+ K VD+A+ LL + P +TY+S+IDGL K G + A EL
Sbjct: 393 AMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALEL 441
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 111/225 (49%), Gaps = 4/225 (1%)
Query: 159 RAALQLMRQI----QGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFT 214
RA ++ M+Q G + + D E I+H+ C + ++DA L M +P +
Sbjct: 82 RARVKPMKQFGLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPS 141
Query: 215 YNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMM 274
+ L+ G + QL +A +L MV PD T+N+++ L K+G+++ A +L M
Sbjct: 142 CSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMS 201
Query: 275 KQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVD 334
G PD+ITYN+++ +A + Q G P + +Y++++ +C+
Sbjct: 202 LSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSA 261
Query: 335 EALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
A+ +L +M + PD VTY+SL++ C+ G + ++ ++
Sbjct: 262 RAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHIL 306
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 127/293 (43%), Gaps = 28/293 (9%)
Query: 113 LMKGLCL---NGQVQTALQFHDHVVAQGFRL-------------------DQVTYRILIN 150
L+ +C+ N + + +FH + V R D+ T +++
Sbjct: 53 LLSSVCIDNVNDHAERSSEFHHYGVGTNLRARVKPMKQFGLSSDGPITENDEETNNEILH 112
Query: 151 GLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLP 210
LC G+ A +L+ + P + ++ + + A + M+ +P
Sbjct: 113 NLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVP 172
Query: 211 DVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVL 270
D TYN +I C ++ A LL++M PD T+N ++ + GN ++A
Sbjct: 173 DTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFW 232
Query: 271 AVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKT 330
++ G P +ITY L++ C +A ++ M G P++ +Y+ ++N C+
Sbjct: 233 KDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRR 292
Query: 331 KKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA-WELVDDVIFIF 382
++E +++ + + +TVTY++L+ LC SH W+ V++++ I
Sbjct: 293 GNLEEVASVIQHILSHGLELNTVTYNTLLHSLC-----SHEYWDEVEEILNIM 340
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
DDA+ + L P +I +N ++ L K A+ L HQ+ GI PD T L
Sbjct: 401 DDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSL 460
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I +C + A VL + RG T+ +++GLC +++ A++ + ++ G
Sbjct: 461 IYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGC 520
Query: 139 RLDQVTYRILINGLCKMGQTRAAL 162
+ D+ Y ++ G+ +MG A+
Sbjct: 521 KPDETIYTAIVKGVEEMGMGSEAV 544
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 162/333 (48%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
++ ++ VK+K + A ++ + G+ PD+ +I+ +C + A + ++
Sbjct: 522 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ 581
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
K +RP T TF ++ G +G ++ +L+ D + G T+ LINGL + Q
Sbjct: 582 KLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQME 641
Query: 160 AALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
A++++ ++ V + YT I+ + A+ ++ + + D+FTY AL+
Sbjct: 642 KAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALL 701
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVK 279
C +++ A + EM +NI +++ +NIL+D + G+V EA ++ M K+GVK
Sbjct: 702 KACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVK 761
Query: 280 PDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNL 339
PDI TY S + ++N+A M G+ PN+ +Y+ +I G + ++AL+
Sbjct: 762 PDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSC 821
Query: 340 LAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAW 372
EM I PD Y L+ L ++ A+
Sbjct: 822 YEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAY 854
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 165/362 (45%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N + A ++ + PI ++ ++ + + + +L G +P + T
Sbjct: 429 NMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYG 488
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
LIN Y +I+ A V + + G + + T++ ++ G A + +V +
Sbjct: 489 CLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKE 548
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G + D + Y +I+ C MG A+Q ++++Q +P + IIH + K + +
Sbjct: 549 GMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRS 608
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
++ M +P V T+N LI G Q+++A ++LDEM + + +T+ ++
Sbjct: 609 LEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQG 668
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
G+ +A + +G+ DI TY +L+ C + A + M R I N
Sbjct: 669 YASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRN 728
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
Y+I+I+G + V EA +L+ +M + + PD TY+S I K+G ++ A + ++
Sbjct: 729 SFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIE 788
Query: 377 DV 378
++
Sbjct: 789 EM 790
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 167/360 (46%), Gaps = 3/360 (0%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
+A+ A F+ R+ T + KI+ + + + A +L +++ GI I
Sbjct: 394 HAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYH 453
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
+++ Y A V ++ + G+ P +T+ L+ G++ AL+ + +
Sbjct: 454 TMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEE 513
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G + + TY ++ING K+ A + + + +KPDV +Y II +FC + A
Sbjct: 514 GVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRA 573
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
EM R P T+ +I+G+ ++ + ++ D M P +TFN L++
Sbjct: 574 IQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLING 633
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
L ++ +++A +L M GV + TY +M GY V + KA + F + G+ +
Sbjct: 634 LVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVD 693
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
+ +Y ++ CK+ ++ AL + EM +NI ++ Y+ LIDG + G V WE D
Sbjct: 694 IFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDV---WEAAD 750
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 158/356 (44%), Gaps = 6/356 (1%)
Query: 15 IRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFT 74
+++ +A ++F +++ P +I +N I+++ M + AI ++ P T
Sbjct: 532 LKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRT 591
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
+I+ Y + + V + + G P TF L+ GL Q++ A++ D +
Sbjct: 592 FMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMT 651
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
G ++ TY ++ G +G T A + ++Q + + D+ Y ++ + CK +
Sbjct: 652 LAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQ 711
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
A + EM AR + + F YN LI G+ + EA L+ +M + + PD +T+ +
Sbjct: 712 SALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFI 771
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
A K G++ A + M GVKP+I TY +L+ G+ S KA + M GI
Sbjct: 772 SACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIK 831
Query: 315 PNVHSYSIMINGLCKTKKVDEA------LNLLAEMDCKNIIPDTVTYSSLIDGLCK 364
P+ Y ++ L + EA + + EM +I D T LCK
Sbjct: 832 PDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCK 887
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 119/240 (49%), Gaps = 4/240 (1%)
Query: 142 QVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYS 201
+ + +++ + G A + +++ + + P +YT +IH++ + + +A +
Sbjct: 309 RTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVR 368
Query: 202 EMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHP--DAYTFNILVDALGK 259
+M + + TY+ ++ GF + A DE K IH +A + ++ A +
Sbjct: 369 KMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDE--AKRIHKTLNASIYGKIIYAHCQ 426
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
N++ A+ ++ M ++G+ I Y+++MDGY +V++ K +F + + G P V +
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVT 486
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
Y +IN K K+ +AL + M + + + TYS +I+G K ++A+ + +D++
Sbjct: 487 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 546
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 107/240 (44%), Gaps = 11/240 (4%)
Query: 14 SIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIF 73
S+ + A F RL I + +L + K +A++++ ++ I + F
Sbjct: 671 SVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF 730
Query: 74 TLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHV 133
ILI+ + + + A ++ ++ K G +PD T+T+ + G + A Q + +
Sbjct: 731 VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM 790
Query: 134 VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLV 193
A G + + TY LI G + AL +++ +KPD +Y ++ S +
Sbjct: 791 EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASI 850
Query: 194 SDAYNLYS-------EMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
++AY +YS EM+ ++ D+ T A+ + C+ +++ + L E + K PD
Sbjct: 851 AEAY-IYSGVMTICKEMVEAGLIVDMGT--AVHWSKCLC-KIEASGGELTETLQKTFPPD 906
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 11/117 (9%)
Query: 279 KPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALN 338
KP + ++ Y ++++A++ F M RGI P Y+ +I+ + +DEAL+
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 339 LLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVIFIFNVWMSYAKAIKLT 395
+ +M + I VTYS ++ G K+G A + W AK I T
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAA-----------DYWFDEAKRIHKT 411
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 192/416 (46%), Gaps = 42/416 (10%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A+ F M+ + +N +L K+ A L ++ GI PD+ T LI
Sbjct: 371 EALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLI 430
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ YC Q ++ A ++ +++ G PD IT+ L+ GL NG + L+ ++ + A+G +
Sbjct: 431 DGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPK 490
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQ-------GQLVKPDVE-------------- 178
+ VT ++I GLC + + A ++ VK E
Sbjct: 491 PNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRL 550
Query: 179 -------MYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEA 231
+Y + S C + + A+++ +M A RV P +I FC ++ ++EA
Sbjct: 551 EYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREA 610
Query: 232 TKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDG 291
L D MV + + PD +T+ I++ + +++A+++ M ++G+KPD++TY L+D
Sbjct: 611 QVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDR 670
Query: 292 Y----------CLV-SEVNK--AKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALN 338
Y C V EV K A ++ GI +V Y+++I+ CK +++A
Sbjct: 671 YLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAE 730
Query: 339 LLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVIFIFNV-WMSYAKAIK 393
L M + PD V Y++LI + G + A LV ++ +N+ S+ A+K
Sbjct: 731 LFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSESFEAAVK 786
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 178/407 (43%), Gaps = 47/407 (11%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N +A+ +++L + + IL KM A+ + I D
Sbjct: 333 NLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYN 392
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
+ + ++ AF +L ++ RG PD I +TTL+ G CL G+V AL D ++
Sbjct: 393 VAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGN 452
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G D +TY +L++GL + G L++ +++ + KP+ ++II C + V +A
Sbjct: 453 GMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEA 512
Query: 197 YNLYSEM-------------------LARRVLPDVF---------TYNALIYGFCIVSQL 228
+ +S + L+++ Y L + CI L
Sbjct: 513 EDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYL 572
Query: 229 KEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSL 288
++A +L +M + P ++ A K NV+EA+ + M+++G+ PD+ TY +
Sbjct: 573 EKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIM 632
Query: 289 MDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMIN----------------GLCKTKK 332
+ YC ++E+ KA+ +F M QRGI P+V +Y+++++ G +K
Sbjct: 633 IHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRK 692
Query: 333 VDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
E L E I D V Y+ LID CK + A EL D +I
Sbjct: 693 ASEVLR---EFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMI 736
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 157/333 (47%), Gaps = 28/333 (8%)
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
L +++ +CN+ ++ +A SV+ ++ + G+ D ++ C N + AL F D ++
Sbjct: 286 LGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKML 345
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
+G +++ V +++ CKM AL+ ++ + + D Y + + K V
Sbjct: 346 GKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVE 405
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
+A+ L EM R ++PDV Y LI G+C+ ++ +A L+DEM+ + PD T+N+LV
Sbjct: 406 EAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLV 465
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQR--- 311
L + G+ +E + M +G KP+ +T + +++G C +V +A+D F+S+ Q+
Sbjct: 466 SGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPE 525
Query: 312 ------------GIAPNVHS-------------YSIMINGLCKTKKVDEALNLLAEMDCK 346
G++ + Y + LC +++A ++L +M
Sbjct: 526 NKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAY 585
Query: 347 NIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+ P +I CK V A L D ++
Sbjct: 586 RVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMV 618
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 175/394 (44%), Gaps = 41/394 (10%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++A + + P +I + ++ A+ L ++ G+SPD+ T +L
Sbjct: 405 EEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVL 464
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQF--------- 129
++ + ++ G +P+ +T + +++GLC +V+ A F
Sbjct: 465 VSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCP 524
Query: 130 -------------------HDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQG 170
+ V + L + Y L LC G A +++++
Sbjct: 525 ENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSA 584
Query: 171 QLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKE 230
V+P M +I +FCK V +A L+ M+ R ++PD+FTY +I+ +C +++L++
Sbjct: 585 YRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQK 644
Query: 231 ATKLLDEMVTKNIHPDAYTFNILVDALGK-----------EGNV--KEAKTVLAVMMKQG 277
A L ++M + I PD T+ +L+D K +G V ++A VL G
Sbjct: 645 AESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAG 704
Query: 278 VKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEAL 337
+ D++ Y L+D C ++ + +A ++F+ M G+ P++ +Y+ +I+ + +D A+
Sbjct: 705 IGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAV 764
Query: 338 NLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
L+ E+ K IP +++ K+ R +
Sbjct: 765 TLVTELSKKYNIPSESFEAAVKSAALKAKRFQYG 798
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 48/344 (13%)
Query: 71 DIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA--LQ 128
DI L+N +I ++ ++ + G + T+ ++K LC G ++ A L
Sbjct: 180 DIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLL 239
Query: 129 FHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQL--------------MRQIQGQLVK 174
+ V Y+ INGLC G+T A+ L +R + G +V+
Sbjct: 240 IENESV--------FGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVR 291
Query: 175 P------------------------DVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLP 210
DV +I +CK+ + +A +ML + +
Sbjct: 292 GFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKV 351
Query: 211 DVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVL 270
+ + ++ +C + EA + E NI D +N+ DAL K G V+EA +L
Sbjct: 352 NCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELL 411
Query: 271 AVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKT 330
M +G+ PD+I Y +L+DGYCL +V A D+ + M G++P++ +Y+++++GL +
Sbjct: 412 QEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARN 471
Query: 331 KKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
+E L + M + P+ VT S +I+GLC + +V A +
Sbjct: 472 GHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDF 515
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 154/359 (42%), Gaps = 31/359 (8%)
Query: 48 VKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDT 107
+KMK A S+ +++ G D++ +I+ YC + A L K+L +G + +
Sbjct: 297 MKMK---AAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNC 353
Query: 108 ITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQ 167
+ + +++ C AL+ LD+V Y + + L K+G+ A +L+++
Sbjct: 354 VIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQE 413
Query: 168 IQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQ 227
++ + + PDV YT +I +C V DA +L EM+ + PD+ TYN L+ G
Sbjct: 414 MKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGH 473
Query: 228 LKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVL----------------- 270
+E ++ + M + P+A T +++++ L VKEA+
Sbjct: 474 EEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKG 533
Query: 271 ---AVMMKQGVKPDI--------ITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
A + K+ K + Y L C+ + KA D+ M + P
Sbjct: 534 YCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSM 593
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
MI CK V EA L M + +IPD TY+ +I C+ + A L +D+
Sbjct: 594 CGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDM 652
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 121/270 (44%), Gaps = 9/270 (3%)
Query: 113 LMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQL 172
LM + G++ + + G ++ TY I++ LC+ G A L+ +
Sbjct: 187 LMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLL------I 240
Query: 173 VKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPD---VFTYNALIYGFCIVSQLK 229
V Y I+ C A L E++ R+ L ++ GFC ++K
Sbjct: 241 ENESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMK 300
Query: 230 EATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLM 289
A ++ EM D Y ++D K N+ EA L M+ +G+K + + + ++
Sbjct: 301 AAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLIL 360
Query: 290 DGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNII 349
YC + +A + F I + Y++ + L K +V+EA LL EM + I+
Sbjct: 361 QCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIV 420
Query: 350 PDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
PD + Y++LIDG C G+V A +L+D++I
Sbjct: 421 PDVINYTTLIDGYCLQGKVVDALDLIDEMI 450
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 81/197 (41%), Gaps = 24/197 (12%)
Query: 15 IRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFT 74
+ N +A +F+ ++ P + + ++ + ++ A SL + GI PD+ T
Sbjct: 604 LNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVT 663
Query: 75 LTILINCYCN-QAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHV 133
T+L++ Y + SV ++ KR A +
Sbjct: 664 YTVLLDRYLKLDPEHHETCSVQGEVGKR-----------------------KASEVLREF 700
Query: 134 VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLV 193
A G LD V Y +LI+ CKM A +L ++ ++PD+ YT +I S+ + +
Sbjct: 701 SAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYI 760
Query: 194 SDAYNLYSEMLARRVLP 210
A L +E+ + +P
Sbjct: 761 DMAVTLVTELSKKYNIP 777
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 184/395 (46%), Gaps = 44/395 (11%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEF--NKILTSLVKMKHYPTAISL-SHQLDFTGISPDIFTL 75
D+A+ + + + P F + +++ K+ A+ +D + P++ T
Sbjct: 151 DNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTY 210
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
T L++ C ++ ++ ++ G+ D + ++ + G G + AL +V
Sbjct: 211 TTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVE 270
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
+G D V+Y ILI+GL K G AL L+ ++ + V+P++ YT II CK + +
Sbjct: 271 KGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEE 330
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
A+ L++ +L+ + D F Y LI G C L A +L +M + I P T+N +++
Sbjct: 331 AFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVIN 390
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVN---------------- 299
L G V EA V +GV D+ITY++L+D Y V ++
Sbjct: 391 GLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPM 445
Query: 300 -------------------KAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLL 340
+A ++ +MP+ + P+ +Y+ MI G CKT +++EAL +
Sbjct: 446 DLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMF 505
Query: 341 AEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
E+ K+ + V Y+ +ID LCK G + A E++
Sbjct: 506 NELR-KSSVSAAVCYNRIIDALCKKGMLDTATEVL 539
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 185/434 (42%), Gaps = 70/434 (16%)
Query: 15 IRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFT 74
++N D + I R L ++ N +L + + M Y A +L + ++PD T
Sbjct: 425 VQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTAT 484
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
+I YC QI A + + L++ + + ++ LC G + TA + +
Sbjct: 485 YATMIKGYCKTGQIEEALEMFNE-LRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELW 543
Query: 135 AQGFRLDQVTYRILI-----NG------------------------------LCKMGQTR 159
+G LD T R L+ NG LCK G
Sbjct: 544 EKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFE 603
Query: 160 AALQ---LMRQIQGQLVKP-------------------------------DVEMYTIIIH 185
AA++ +MR+ + P DV YTIII+
Sbjct: 604 AAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIIN 663
Query: 186 SFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHP 245
CK+ + A NL S +R V + TYN+LI G C L EA +L D + + P
Sbjct: 664 GLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVP 723
Query: 246 DAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIF 305
T+ IL+D L KEG +A+ +L M+ +G+ P+II YNS++DGYC + + A +
Sbjct: 724 SEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVV 783
Query: 306 NSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKS 365
+ + P+ + S MI G CK ++EAL++ E KNI D + LI G C
Sbjct: 784 SRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTK 843
Query: 366 GRVSHAWELVDDVI 379
GR+ A L+ +++
Sbjct: 844 GRMEEARGLLREML 857
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 161/296 (54%), Gaps = 7/296 (2%)
Query: 102 GYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG--FRLDQVTYRILINGLCKMGQTR 159
G P ++TF +L+ G++ A++ + + + + D +I+G CK+G+
Sbjct: 129 GAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPE 188
Query: 160 AALQLMRQ-IQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNAL 218
AL + ++ P++ YT ++ + C+ V + +L + D Y+
Sbjct: 189 LALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNW 248
Query: 219 IYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGV 278
I+G+ L +A EMV K ++ D +++IL+D L KEGNV+EA +L M+K+GV
Sbjct: 249 IHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGV 308
Query: 279 KPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALN 338
+P++ITY +++ G C + ++ +A +FN + GI + Y +I+G+C+ ++ A +
Sbjct: 309 EPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFS 368
Query: 339 LLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWE----LVDDVIFIFNVWMSYAK 390
+L +M+ + I P +TY+++I+GLC +GRVS A E +V DVI + SY K
Sbjct: 369 MLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIK 424
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 182/385 (47%), Gaps = 49/385 (12%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISP--DIFTLTILINCYCNQAQITSAF 92
P + F ++ V+ AI + + ++ D F + +I+ +C + A
Sbjct: 132 PSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELAL 191
Query: 93 SVLAKILKRGYR-PDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILING 151
+ G P+ +T+TTL+ LC G+V + +GF D V Y I+G
Sbjct: 192 GFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHG 251
Query: 152 LCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPD 211
K G AL R++ + + DV Y+I+I K+ V +A L +M+ V P+
Sbjct: 252 YFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPN 311
Query: 212 VFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLA 271
+ TY A+I G C + +L+EA L + +++ I D + + L+D + ++GN+ A ++L
Sbjct: 312 LITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLG 371
Query: 272 VMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTK 331
M ++G++P I+TYN++++G C+ V++A ++ +G+ +V +YS +++ K +
Sbjct: 372 DMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQ 426
Query: 332 KVDEALNL--------------------------------------LAEMDCKNIIPDTV 353
+D L + + EMD + PDT
Sbjct: 427 NIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMD---LTPDTA 483
Query: 354 TYSSLIDGLCKSGRVSHAWELVDDV 378
TY+++I G CK+G++ A E+ +++
Sbjct: 484 TYATMIKGYCKTGQIEEALEMFNEL 508
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 141/273 (51%), Gaps = 6/273 (2%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N ++A+ + ++++ P +I + I+ L KM A L +++ GI D F
Sbjct: 292 NVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYV 351
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
LI+ C + + AFS+L + +RG +P +T+ T++ GLC+ G+V A + V++
Sbjct: 352 TLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADE-----VSK 406
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G D +TY L++ K+ A L++ R+ + D+ M I++ +F +A
Sbjct: 407 GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEA 466
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
LY M + PD TY +I G+C Q++EA ++ +E+ ++ A +N ++DA
Sbjct: 467 DALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDA 525
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLM 289
L K+G + A VL + ++G+ DI T +L+
Sbjct: 526 LCKKGMLDTATEVLIELWEKGLYLDIHTSRTLL 558
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 145/313 (46%), Gaps = 39/313 (12%)
Query: 106 DTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLM 165
D I +T ++ GLC G + AL ++G L+ +TY LINGLC+ G AL+L
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 166 RQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIV 225
++ + P Y I+I + CK+ L DA L M+++ ++P++ YN+++ G+C +
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 226 SQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITY 285
Q ++A +++ + + PDA+T + ++ K+G+++EA +V + + D +
Sbjct: 774 GQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGF 833
Query: 286 NSLMDGYCLVSEVNKAKDIFNSM---------PQRGIAPNVHSYSI--MINGLCKTKKVD 334
L+ G+C + +A+ + M R A S SI + LC+ +V
Sbjct: 834 LFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQGRVP 893
Query: 335 EALNLLAEMDC----------------------------KNIIPDTVTYSSLIDGLCKSG 366
+A+ +L E+ K+ + D + S + LC SG
Sbjct: 894 QAIKILDEISSTIYPSGKNLGSYQRLQFLNDVNEEEIKKKDYVHDFHSLHSTVSSLCTSG 953
Query: 367 RVSHAWELVDDVI 379
++ A E V V+
Sbjct: 954 KLEQANEFVMSVL 966
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 152/344 (44%), Gaps = 18/344 (5%)
Query: 37 IIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLA 96
++ ++ ++ L K + A+ L ++ G+ P++ T T +I C ++ AF +
Sbjct: 277 VVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFN 336
Query: 97 KILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMG 156
+IL G D + TL+ G+C G + A + +G + +TY +INGLC G
Sbjct: 337 RILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAG 396
Query: 157 QTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYN 216
+ A ++ + + G DV Y+ ++ S+ K + + + L ++ D+ N
Sbjct: 397 RVSEADEVSKGVVG-----DVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCN 451
Query: 217 ALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQ 276
L+ F ++ EA L M ++ PD T+ ++ K G ++EA + + K
Sbjct: 452 ILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKS 511
Query: 277 GVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEA 336
V + YN ++D C ++ A ++ + ++G+ ++H+ +++ +
Sbjct: 512 SVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGI 570
Query: 337 LNLLAEMD------CKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
L L+ ++ C ++ D + LCK G A E+
Sbjct: 571 LGLVYGLEQLNSDVCLGMLNDAILL------LCKRGSFEAAIEV 608
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 143/334 (42%), Gaps = 41/334 (12%)
Query: 87 QITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYR 146
+ +S L +LK G+ P + ++ L + LQF+ + ++ ++ Y
Sbjct: 6 RTSSGLFSLQSLLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYS 65
Query: 147 ILINGLCKMGQTRAALQLMR-QIQGQLVKPDVEMYTIIIHSFC--KDKLVSDAYNLYSEM 203
I+ + + A + + I + P M +IH F +D L +
Sbjct: 66 IVSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCL 125
Query: 204 LARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIH------------------- 244
P T+ +LIY F ++ A ++L+ M KN++
Sbjct: 126 RNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIG 185
Query: 245 -------------------PDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITY 285
P+ T+ LV AL + G V E + ++ + +G + D + Y
Sbjct: 186 KPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFY 245
Query: 286 NSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDC 345
++ + GY + A M ++G+ +V SYSI+I+GL K V+EAL LL +M
Sbjct: 246 SNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIK 305
Query: 346 KNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+ + P+ +TY+++I GLCK G++ A+ L + ++
Sbjct: 306 EGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRIL 339
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 169/348 (48%), Gaps = 9/348 (2%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
D++ +F+++ P + +L LV+ A + G+ P + +L +LI
Sbjct: 104 DSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLI 163
Query: 80 NCYC-NQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
C N + + + ++ KRG PD+ T+ TL+ GLC G++ A + +V +
Sbjct: 164 KALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDC 223
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
VTY LINGLC A++ + +++ + ++P+V Y+ ++ CKD A
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME 283
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L+ M+AR P++ TY LI G C +++EA +LLD M + + PDA + ++
Sbjct: 284 LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFC 343
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYN-------SLMDGYCLVSEVNKAKDIFNSMPQR 311
+EA L M+ G+ P+ +T+N ++ G C + ++A ++ SM R
Sbjct: 344 AISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSR 402
Query: 312 GIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLI 359
GI+ V + ++ LCK + +A+ L+ E+ IP T+ LI
Sbjct: 403 GISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 161/337 (47%), Gaps = 10/337 (2%)
Query: 52 HYP-TAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITF 110
H P ++ + H++ P ++ + Q+ AF + + G P +
Sbjct: 100 HRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASL 159
Query: 111 TTLMKGLCLN-GQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQ 169
L+K LC N G V L+ + +G D TY LI+GLC+ G+ A +L ++
Sbjct: 160 NVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMV 219
Query: 170 GQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLK 229
+ P V YT +I+ C K V +A EM ++ + P+VFTY++L+ G C +
Sbjct: 220 EKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSL 279
Query: 230 EATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLM 289
+A +L + M+ + P+ T+ L+ L KE ++EA +L M QG+KPD Y ++
Sbjct: 280 QAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVI 339
Query: 290 DGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSI-------MINGLCKTKKVDEALNLLAE 342
G+C +S+ +A + + M GI PN +++I ++ GLC A L
Sbjct: 340 SGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYP-SRAFTLYLS 398
Query: 343 MDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
M + I + T SL+ LCK G A +LVD+++
Sbjct: 399 MRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIV 435
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 138/301 (45%), Gaps = 22/301 (7%)
Query: 10 SLPPSI-----------RN---ADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPT 55
LPP++ RN D + IF + + P + +++ L +
Sbjct: 151 GLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDE 210
Query: 56 AISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMK 115
A L ++ +P + T T LIN C + A L ++ +G P+ T+++LM
Sbjct: 211 AKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMD 270
Query: 116 GLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKP 175
GLC +G+ A++ + ++A+G R + VTY LI GLCK + + A++L+ ++ Q +KP
Sbjct: 271 GLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKP 330
Query: 176 DVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTY-------NALIYGFCIVSQL 228
D +Y +I FC +A N EM+ + P+ T+ N ++ G C +
Sbjct: 331 DAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-ANYP 389
Query: 229 KEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSL 288
A L M ++ I + T LV L K+G ++A ++ ++ G P T+ L
Sbjct: 390 SRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLL 449
Query: 289 M 289
+
Sbjct: 450 I 450
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 164/327 (50%), Gaps = 6/327 (1%)
Query: 56 AISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMK 115
AI L H + P+IF + ++ C+ + A ++ +I + G PD + +TT++
Sbjct: 360 AIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMID 416
Query: 116 GLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKP 175
G C G+ A Q+ ++ G T ILI + G A + R ++ + +K
Sbjct: 417 GYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKL 476
Query: 176 DVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLL 235
DV Y ++H + K ++ + L EM + + PDV TYN LI+ + + EA +++
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 236 DEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLV 295
E++ + P F ++ K G+ +EA + M +KPD++T ++L+ GYC
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 296 SEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTY 355
+ KA +FN + G+ P+V Y+ +I+G C +++A L+ M + ++P+ T+
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTH 656
Query: 356 SSLIDGLCKSGRV---SHAWELVDDVI 379
+L+ GL V +HA L++++I
Sbjct: 657 HALVLGLEGKRFVNSETHASMLLEEII 683
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 156/300 (52%), Gaps = 3/300 (1%)
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
L++ I YC+ + +L + G RPD + FT + LC G ++ A +
Sbjct: 274 LSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLK 333
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
G D V+ +I+G CK+G+ A++L+ + ++P++ +Y+ + + C +
Sbjct: 334 LFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDML 390
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
A ++ E+ +LPD Y +I G+C + + +A + ++ P T IL+
Sbjct: 391 RASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILI 450
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
A + G++ +A++V M +G+K D++TYN+LM GY ++NK ++ + M GI+
Sbjct: 451 GACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGIS 510
Query: 315 PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
P+V +Y+I+I+ + +DEA +++E+ + +P T+ ++ +I G K G A+ L
Sbjct: 511 PDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFIL 570
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 168/368 (45%), Gaps = 45/368 (12%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
F+K L+ MKHY GI PDI T+ I+ C + A SVL K+
Sbjct: 287 FDKGWELLMGMKHY-------------GIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLK 333
Query: 100 KRG--------------------------------YRPDTITFTTLMKGLCLNGQVQTAL 127
G RP+ +++ + +C G + A
Sbjct: 334 LFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRAS 393
Query: 128 QFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSF 187
+ G D V Y +I+G C +G+T A Q + P + TI+I +
Sbjct: 394 TIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGAC 453
Query: 188 CKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDA 247
+ +SDA +++ M + DV TYN L++G+ QL + +L+DEM + I PD
Sbjct: 454 SRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDV 513
Query: 248 YTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNS 307
T+NIL+ ++ G + EA +++ ++++G P + + ++ G+ + +A ++
Sbjct: 514 ATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFY 573
Query: 308 MPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGR 367
M + P+V + S +++G CK +++++A+ L ++ + PD V Y++LI G C G
Sbjct: 574 MADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGD 633
Query: 368 VSHAWELV 375
+ A EL+
Sbjct: 634 IEKACELI 641
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 156/304 (51%), Gaps = 3/304 (0%)
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
+ILI+C + ++ A + K+ + G P +L+K + ++ A +F +H++
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHML 263
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
++G L+ + I C G +L+ ++ ++PD+ +T+ I CK +
Sbjct: 264 SRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLK 323
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
+A ++ ++ + D + +++I GFC V + +EA KL+ + P+ + ++ +
Sbjct: 324 EATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---RLRPNIFVYSSFL 380
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
+ G++ A T+ + + G+ PD + Y +++DGYC + +KA F ++ + G
Sbjct: 381 SNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNP 440
Query: 315 PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
P++ + +I+I + + +A ++ M + + D VTY++L+ G K+ +++ +EL
Sbjct: 441 PSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFEL 500
Query: 375 VDDV 378
+D++
Sbjct: 501 IDEM 504
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 116/243 (47%), Gaps = 2/243 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A F LL+ P + ++ + + A S+ + G+ D+ T L
Sbjct: 425 DKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNL 484
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
++ Y Q+ F ++ ++ G PD T+ L+ + + G + A + ++ +GF
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ + +I G K G + A L + +KPDV + ++H +CK + + A
Sbjct: 545 VPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIV 604
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L++++L + PDV YN LI+G+C V +++A +L+ MV + + P+ T + LV LG
Sbjct: 605 LFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV--LG 662
Query: 259 KEG 261
EG
Sbjct: 663 LEG 665
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 118/280 (42%), Gaps = 42/280 (15%)
Query: 132 HVVAQGFRLDQVTYRILINGLCKM----GQTRAALQLMRQIQGQLVKPDV--EMYTIIIH 185
H++ G + YR + LC + G+ R+ +M+ + + V +++I+I
Sbjct: 154 HILVSG----NMNYRAVDMLLCLVKKCSGEERSLCLVMKDLFETRIDRRVLETVFSILID 209
Query: 186 SFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHP 245
+++ V+ A L ++ + P +L+ V L+ A + ++ M+++ H
Sbjct: 210 CCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHL 269
Query: 246 DAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIF 305
+A ++ + +G + +L M G++PDI+ + +D C + +A +
Sbjct: 270 NAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVL 329
Query: 306 NSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCK------------------- 346
+ GI+ + S S +I+G CK K +EA+ L+ +
Sbjct: 330 FKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDM 389
Query: 347 -------------NIIPDTVTYSSLIDGLCKSGRVSHAWE 373
++PD V Y+++IDG C GR A++
Sbjct: 390 LRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQ 429
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 164/327 (50%), Gaps = 6/327 (1%)
Query: 56 AISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMK 115
AI L H + P+IF + ++ C+ + A ++ +I + G PD + +TT++
Sbjct: 360 AIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMID 416
Query: 116 GLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKP 175
G C G+ A Q+ ++ G T ILI + G A + R ++ + +K
Sbjct: 417 GYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKL 476
Query: 176 DVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLL 235
DV Y ++H + K ++ + L EM + + PDV TYN LI+ + + EA +++
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 236 DEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLV 295
E++ + P F ++ K G+ +EA + M +KPD++T ++L+ GYC
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 296 SEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTY 355
+ KA +FN + G+ P+V Y+ +I+G C +++A L+ M + ++P+ T+
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTH 656
Query: 356 SSLIDGLCKSGRV---SHAWELVDDVI 379
+L+ GL V +HA L++++I
Sbjct: 657 HALVLGLEGKRFVNSETHASMLLEEII 683
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 156/300 (52%), Gaps = 3/300 (1%)
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
L++ I YC+ + +L + G RPD + FT + LC G ++ A +
Sbjct: 274 LSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLK 333
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
G D V+ +I+G CK+G+ A++L+ + ++P++ +Y+ + + C +
Sbjct: 334 LFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDML 390
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
A ++ E+ +LPD Y +I G+C + + +A + ++ P T IL+
Sbjct: 391 RASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILI 450
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
A + G++ +A++V M +G+K D++TYN+LM GY ++NK ++ + M GI+
Sbjct: 451 GACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGIS 510
Query: 315 PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
P+V +Y+I+I+ + +DEA +++E+ + +P T+ ++ +I G K G A+ L
Sbjct: 511 PDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFIL 570
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 168/368 (45%), Gaps = 45/368 (12%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
F+K L+ MKHY GI PDI T+ I+ C + A SVL K+
Sbjct: 287 FDKGWELLMGMKHY-------------GIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLK 333
Query: 100 KRG--------------------------------YRPDTITFTTLMKGLCLNGQVQTAL 127
G RP+ +++ + +C G + A
Sbjct: 334 LFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRAS 393
Query: 128 QFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSF 187
+ G D V Y +I+G C +G+T A Q + P + TI+I +
Sbjct: 394 TIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGAC 453
Query: 188 CKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDA 247
+ +SDA +++ M + DV TYN L++G+ QL + +L+DEM + I PD
Sbjct: 454 SRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDV 513
Query: 248 YTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNS 307
T+NIL+ ++ G + EA +++ ++++G P + + ++ G+ + +A ++
Sbjct: 514 ATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFY 573
Query: 308 MPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGR 367
M + P+V + S +++G CK +++++A+ L ++ + PD V Y++LI G C G
Sbjct: 574 MADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGD 633
Query: 368 VSHAWELV 375
+ A EL+
Sbjct: 634 IEKACELI 641
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 156/304 (51%), Gaps = 3/304 (0%)
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
+ILI+C + ++ A + K+ + G P +L+K + ++ A +F +H++
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHML 263
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
++G L+ + I C G +L+ ++ ++PD+ +T+ I CK +
Sbjct: 264 SRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLK 323
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
+A ++ ++ + D + +++I GFC V + +EA KL+ + P+ + ++ +
Sbjct: 324 EATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---RLRPNIFVYSSFL 380
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
+ G++ A T+ + + G+ PD + Y +++DGYC + +KA F ++ + G
Sbjct: 381 SNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNP 440
Query: 315 PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
P++ + +I+I + + +A ++ M + + D VTY++L+ G K+ +++ +EL
Sbjct: 441 PSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFEL 500
Query: 375 VDDV 378
+D++
Sbjct: 501 IDEM 504
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 116/243 (47%), Gaps = 2/243 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A F LL+ P + ++ + + A S+ + G+ D+ T L
Sbjct: 425 DKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNL 484
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
++ Y Q+ F ++ ++ G PD T+ L+ + + G + A + ++ +GF
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ + +I G K G + A L + +KPDV + ++H +CK + + A
Sbjct: 545 VPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIV 604
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L++++L + PDV YN LI+G+C V +++A +L+ MV + + P+ T + LV LG
Sbjct: 605 LFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV--LG 662
Query: 259 KEG 261
EG
Sbjct: 663 LEG 665
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 118/280 (42%), Gaps = 42/280 (15%)
Query: 132 HVVAQGFRLDQVTYRILINGLCKM----GQTRAALQLMRQIQGQLVKPDV--EMYTIIIH 185
H++ G + YR + LC + G+ R+ +M+ + + V +++I+I
Sbjct: 154 HILVSG----NMNYRAVDMLLCLVKKCSGEERSLCLVMKDLFETRIDRRVLETVFSILID 209
Query: 186 SFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHP 245
+++ V+ A L ++ + P +L+ V L+ A + ++ M+++ H
Sbjct: 210 CCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHL 269
Query: 246 DAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIF 305
+A ++ + +G + +L M G++PDI+ + +D C + +A +
Sbjct: 270 NAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVL 329
Query: 306 NSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCK------------------- 346
+ GI+ + S S +I+G CK K +EA+ L+ +
Sbjct: 330 FKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDM 389
Query: 347 -------------NIIPDTVTYSSLIDGLCKSGRVSHAWE 373
++PD V Y+++IDG C GR A++
Sbjct: 390 LRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQ 429
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 177/376 (47%), Gaps = 39/376 (10%)
Query: 34 TPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFS 93
P + +N +L +L K A SL ++ P+ T ILI+ YCN+ ++ +
Sbjct: 214 APNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSMV 269
Query: 94 VLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLC 153
+L K G+ PD +T T +M+ LC G+V AL+ + V ++G ++D V L+ G C
Sbjct: 270 LLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYC 329
Query: 154 KMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVF 213
+G+ R A + +++ + P+VE Y ++I +C ++ A + +++M + +
Sbjct: 330 ALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFA 389
Query: 214 TYNALIYGFCIVSQLKEATKLLDEM---------------------VTKNIHPDAYTFNI 252
T+N LI G I + + K+L+ M +N DA F +
Sbjct: 390 TFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLL 449
Query: 253 LVD--------------ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEV 298
++ +L ++G + + KT M+ +G P II + L+ Y ++
Sbjct: 450 KMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKI 509
Query: 299 NKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSL 358
++ ++ N M RG P +++ +I G CK KV + + +M + +PDT +Y+ L
Sbjct: 510 EESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPL 569
Query: 359 IDGLCKSGRVSHAWEL 374
++ LC G + AW L
Sbjct: 570 LEELCVKGDIQKAWLL 585
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 143/305 (46%), Gaps = 12/305 (3%)
Query: 97 KILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMG 156
K++ G D T+ LMKGL L ++ + + G + V Y L++ LCK G
Sbjct: 172 KMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNG 231
Query: 157 QTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYN 216
+ A LM +++ +P+ + I+I ++C ++ + + L + + +PDV T
Sbjct: 232 KVGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVT 287
Query: 217 ALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQ 276
++ C ++ EA ++L+ + +K D N LV G ++ A+ M ++
Sbjct: 288 KVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERK 347
Query: 277 GVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEA 336
G P++ TYN L+ GYC V ++ A D FN M I N +++ +I GL + D+
Sbjct: 348 GYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDG 407
Query: 337 LNLLAEMDCKNIIPDTVT--YSSLIDGLCKSGRVSHAWELVDDVIFIFNVWMSYAKAIKL 394
L +L M + + Y+ +I G K R WE D + F+ + + +A+
Sbjct: 408 LKILEMMQDSDTVHGARIDPYNCVIYGFYKENR----WE--DALEFLLKMEKLFPRAVDR 461
Query: 395 TRQLL 399
+ +L+
Sbjct: 462 SFKLI 466
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 130/306 (42%), Gaps = 31/306 (10%)
Query: 102 GYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAA 161
G PD F T+++G ++ + D V G + + +++ L K A
Sbjct: 107 GLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAR 166
Query: 162 LQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYG 221
R++ + DV Y I++ + D + L M V P+ YN L++
Sbjct: 167 EFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHA 226
Query: 222 FCIVSQLKEATKLLDEM-----VTKNIH--------------------------PDAYTF 250
C ++ A L+ EM VT NI PD T
Sbjct: 227 LCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTV 286
Query: 251 NILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQ 310
+++ L EG V EA VL + +G K D++ N+L+ GYC + ++ A+ F M +
Sbjct: 287 TKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMER 346
Query: 311 RGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSH 370
+G PNV +Y+++I G C +D AL+ +M I + T+++LI GL GR
Sbjct: 347 KGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDD 406
Query: 371 AWELVD 376
++++
Sbjct: 407 GLKILE 412
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 148/348 (42%), Gaps = 45/348 (12%)
Query: 24 IFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYC 83
+ + + P ++ K++ L A+ + +++ G D+ L+ YC
Sbjct: 270 LLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYC 329
Query: 84 NQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQV 143
++ A ++ ++GY P+ T+ L+ G C G + +AL + + R +
Sbjct: 330 ALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFA 389
Query: 144 TYRILINGLCKMGQTRAALQLMRQIQ------GQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
T+ LI GL G+T L+++ +Q G + P Y +I+ F K+ DA
Sbjct: 390 TFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDP----YNCVIYGFYKENRWEDAL 445
Query: 198 NL---------------------------------YSEMLARRVLPDVFTYNALIYGFCI 224
Y +M+ +P + + LI+ +
Sbjct: 446 EFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQ 505
Query: 225 VSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIIT 284
+++E+ +L+++MVT+ P + TFN ++ K+ V + M ++G PD +
Sbjct: 506 HGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTES 565
Query: 285 YNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKK 332
YN L++ C+ ++ KA +F+ M ++ I P+ +S ++ C ++K
Sbjct: 566 YNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM--FCLSQK 611
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 122/244 (50%), Gaps = 7/244 (2%)
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQL-VKPDVEMYTIIIHSFCKDKLVSD 195
GF + TYR L + LC + QL+ ++ + + PD ++ II F + +L+
Sbjct: 71 GFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKR 130
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLD-EMVTKNIHPDAYTFNILV 254
++ + + P + +N+ I + + A + +M+ IH D YT+ IL+
Sbjct: 131 VISVVDLVSKFGIKPSLKVFNS-ILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILM 189
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
L + + +L +M GV P+ + YN+L+ C +V +A+ + + M +
Sbjct: 190 KGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE---- 245
Query: 315 PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
PN +++I+I+ C +K+ +++ LL + +PD VT + +++ LC GRVS A E+
Sbjct: 246 PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEV 305
Query: 375 VDDV 378
++ V
Sbjct: 306 LERV 309
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 167/325 (51%), Gaps = 2/325 (0%)
Query: 43 ILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRG 102
++ + + AI + ++ + P++ L++ C + A V + R
Sbjct: 174 VMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR- 232
Query: 103 YRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAAL 162
+ PD+ T++ L++G + A + ++ G D VTY I+++ LCK G+ AL
Sbjct: 233 FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEAL 292
Query: 163 QLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGF 222
++R + + KP +Y++++H++ + + +A + + EM + DV +N+LI F
Sbjct: 293 GIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAF 352
Query: 223 CIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDI 282
C +++K ++L EM +K + P++ + NI++ L + G EA V M+K +PD
Sbjct: 353 CKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDA 411
Query: 283 ITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAE 342
TY ++ +C E+ A ++ M ++G+ P++H++S++INGLC+ + +A LL E
Sbjct: 412 DTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEE 471
Query: 343 MDCKNIIPDTVTYSSLIDGLCKSGR 367
M I P VT+ L L K R
Sbjct: 472 MIEMGIRPSGVTFGRLRQLLIKEER 496
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 143/309 (46%), Gaps = 2/309 (0%)
Query: 71 DIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFH 130
++ T I++ Y ++ A + K P+ + F L+ LC + V+ A +
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 131 DHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKD 190
+++ + F D TY IL+ G K A ++ R++ PD+ Y+I++ CK
Sbjct: 227 ENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKA 285
Query: 191 KLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTF 250
V +A + M P F Y+ L++ + ++L+EA EM + D F
Sbjct: 286 GRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVF 345
Query: 251 NILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQ 310
N L+ A K +K VL M +GV P+ + N ++ E ++A D+F M
Sbjct: 346 NSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI- 404
Query: 311 RGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSH 370
+ P+ +Y+++I C+ K+++ A + M K + P T+S LI+GLC+
Sbjct: 405 KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQK 464
Query: 371 AWELVDDVI 379
A L++++I
Sbjct: 465 ACVLLEEMI 473
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 137/294 (46%), Gaps = 15/294 (5%)
Query: 8 KNSLPPSI-------------RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYP 54
K LPP++ +N A +F + R TP ++ +L K + P
Sbjct: 196 KYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGKEPNLP 254
Query: 55 TAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLM 114
A + ++ G PDI T +I+++ C ++ A ++ + +P T ++ L+
Sbjct: 255 KAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLV 314
Query: 115 KGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVK 174
+++ A+ + G + D + LI CK + + +++++++ + V
Sbjct: 315 HTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVT 374
Query: 175 PDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKL 234
P+ + II+ + +A++++ +M+ + PD TY +I FC +++ A K+
Sbjct: 375 PNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKV 433
Query: 235 LDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSL 288
M K + P +TF++L++ L +E ++A +L M++ G++P +T+ L
Sbjct: 434 WKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRL 487
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 101/195 (51%), Gaps = 2/195 (1%)
Query: 177 VEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLD 236
V Y ++I S K + ++L + M +++L +V T+ ++ + ++ EA +
Sbjct: 134 VRAYHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKYARAQKVDEAIYAFN 192
Query: 237 EMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVS 296
M ++ P+ FN L+ AL K NV++A+ V M+ PD TY+ L++G+
Sbjct: 193 VMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFE-NMRDRFTPDSKTYSILLEGWGKEP 251
Query: 297 EVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYS 356
+ KA+++F M G P++ +YSIM++ LCK +VDEAL ++ MD P T YS
Sbjct: 252 NLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYS 311
Query: 357 SLIDGLCKSGRVSHA 371
L+ R+ A
Sbjct: 312 VLVHTYGTENRLEEA 326
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 179/391 (45%), Gaps = 42/391 (10%)
Query: 6 RLKNSLPPSIRNA---DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQ 62
R NSL S NA ++V +F + +M +P ++ FN +L+ L+K A L +
Sbjct: 139 RYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDE 198
Query: 63 LDFT-GISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNG 121
+ T G++PD +T LIN +C + + AF + + PD +T+ T++ GLC G
Sbjct: 199 MRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAG 258
Query: 122 QVQTALQFHDHVVAQGF-------RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVK 174
+V+ A H V G + V+Y L+ G C + A+ + + + +K
Sbjct: 259 KVKIA-----HNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLK 313
Query: 175 PDVEMYTIIIHSFC--------KDKLV--SDAYNLYSEMLARRVLPDVFTYNALIYGFCI 224
P+ Y +I KD L+ +DA+ ++ PD T+N LI C
Sbjct: 314 PNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFA--------PDACTFNILIKAHCD 365
Query: 225 VSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGV------ 278
L A K+ EM+ +HPD+ ++++L+ L A+T+ + ++ V
Sbjct: 366 AGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDE 425
Query: 279 -KPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEAL 337
KP YN + + C + +A+ +F + +RG+ + SY +I G C+ K A
Sbjct: 426 CKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAY 484
Query: 338 NLLAEMDCKNIIPDTVTYSSLIDGLCKSGRV 368
LL M + +PD TY LIDGL K G
Sbjct: 485 ELLVLMLRREFVPDLETYELLIDGLLKIGEA 515
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 133/248 (53%), Gaps = 9/248 (3%)
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+L + LI G + +++L + ++ + P V + ++ K A++
Sbjct: 135 KLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHD 194
Query: 199 LYSEMLARR---VLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
L+ EM RR V PD +T+N LI GFC S + EA ++ +M + +PD T+N ++D
Sbjct: 195 LFDEM--RRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIID 252
Query: 256 ALGKEGNVKEAKTVLAVMMKQG--VKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
L + G VK A VL+ M+K+ V P++++Y +L+ GYC+ E+++A +F+ M RG+
Sbjct: 253 GLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGL 312
Query: 314 APNVHSYSIMINGLCKTKKVDEALNLLAEMD--CKNIIPDTVTYSSLIDGLCKSGRVSHA 371
PN +Y+ +I GL + + DE ++L + PD T++ LI C +G + A
Sbjct: 313 KPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAA 372
Query: 372 WELVDDVI 379
++ +++
Sbjct: 373 MKVFQEML 380
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 142/279 (50%), Gaps = 10/279 (3%)
Query: 107 TITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMR 166
TI+ TT+++ L L L+F D V +GF + ++ +++ L + A +
Sbjct: 65 TISRTTVLQTLRLIKVPADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLF 124
Query: 167 QIQGQ---LVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFC 223
I+ + VK + +I S+ L ++ L+ M + P V T+N+L+
Sbjct: 125 SIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILL 184
Query: 224 IVSQLKEATKLLDEM-VTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDI 282
+ A L DEM T + PD+YTFN L++ K V EA + M PD+
Sbjct: 185 KRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDV 244
Query: 283 ITYNSLMDGYCLVSEVNKAKDIFNSMPQRG--IAPNVHSYSIMINGLCKTKKVDEALNLL 340
+TYN+++DG C +V A ++ + M ++ + PNV SY+ ++ G C +++DEA+ +
Sbjct: 245 VTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVF 304
Query: 341 AEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+M + + P+ VTY++LI GL + +H ++ + D++
Sbjct: 305 HDMLSRGLKPNAVTYNTLIKGLSE----AHRYDEIKDIL 339
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 173/374 (46%), Gaps = 13/374 (3%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTA--ISLSHQLDFTGISPDIFTLT 76
D+AV +F+ +L P + +N ++ L + Y I + FT +PD T
Sbjct: 298 DEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFN 357
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
ILI +C+ + +A V ++L PD+ +++ L++ LC+ + A + + +
Sbjct: 358 ILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEK 417
Query: 137 GFRLDQ-------VTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCK 189
L + Y + LC G+T+ A ++ RQ+ + V+ D Y +I C+
Sbjct: 418 EVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCR 476
Query: 190 DKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYT 249
+ AY L ML R +PD+ TY LI G + + A L M+ + P A T
Sbjct: 477 EGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATT 536
Query: 250 FNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMP 309
F+ ++ L K E+ ++ +M+++ ++ +I ++ ++ KA I +
Sbjct: 537 FHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLY 596
Query: 310 QRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVS 369
G + ++ LC+ +K+ +A L+ K+ + D T +++I+GLCK R S
Sbjct: 597 DNGYLVKMEE---LLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHS 653
Query: 370 HAWELVDDVIFIFN 383
A+ L ++++ + N
Sbjct: 654 EAFSLYNELVELGN 667
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 163/315 (51%), Gaps = 2/315 (0%)
Query: 67 GISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYR-PDTITFTTLMKGLCLNGQVQT 125
G+ P+ IL+ +C I AF V+ ++ + G P++IT++TLM L + + +
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 126 ALQ-FHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIII 184
A++ F D + +G D VT+ ++ING C+ G+ A +++ ++ P+V Y+ ++
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 185 HSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIH 244
+ FCK + +A + E+ + D Y L+ FC + EA KLL EM
Sbjct: 311 NGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCR 370
Query: 245 PDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDI 304
D T+N+++ L EG +EA +L +GV + +Y +++ C E+ KA
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKF 430
Query: 305 FNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCK 364
+ M +RGI P+ +++ ++ LC++ + + +L +IP ++ ++++ +CK
Sbjct: 431 LSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICK 490
Query: 365 SGRVSHAWELVDDVI 379
++ H +EL+D ++
Sbjct: 491 ERKLVHVFELLDSLV 505
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 117/246 (47%), Gaps = 5/246 (2%)
Query: 18 ADDAVSIFNRLLR---MSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFT 74
+ +AV +F ++ +SP P + FN ++ + A + + G +P+++
Sbjct: 248 SKEAVELFEDMISKEGISPDP--VTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYN 305
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
+ L+N +C +I A ++ K G + DT+ +TTLM C NG+ A++ +
Sbjct: 306 YSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMK 365
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
A R D +TY +++ GL G++ ALQ++ Q + V + Y II+++ C + +
Sbjct: 366 ASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELE 425
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
A S M R + P T+N L+ C + ++L + + P ++ +V
Sbjct: 426 KAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVV 485
Query: 255 DALGKE 260
+++ KE
Sbjct: 486 ESICKE 491
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 102/222 (45%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+ A I + + + P + ++ ++ K+ A ++ TG+ D T L
Sbjct: 285 ERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTL 344
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
+NC+C + A +L ++ R DT+T+ +++GL G+ + ALQ D ++G
Sbjct: 345 MNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGV 404
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
L++ +YRI++N LC G+ A++ + + + + P + ++ C+
Sbjct: 405 HLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVR 464
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVT 240
+ L ++P ++ A++ C +L +LLD +V+
Sbjct: 465 VLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLVS 506
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 112/247 (45%), Gaps = 43/247 (17%)
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKL--- 192
+GF + TY +L++ L + + A ++ Q++ + + ++ ++ F + L
Sbjct: 83 KGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHDK 142
Query: 193 VSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNI 252
V + +NL + RV P + NA+ + N+
Sbjct: 143 VMEMFNLIQ--VIARVKPSL---NAI----------------------------STCLNL 169
Query: 253 LVDALGKEGNVK-EAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQR 311
L+D+ G V K +L G++P+ +N L+ +C ++N A + M +
Sbjct: 170 LIDS----GEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRS 225
Query: 312 GIA-PNVHSYSIMINGLCKTKKVDEALNLLAEMDCK-NIIPDTVTYSSLIDGLCKSGRVS 369
GI+ PN +YS +++ L + EA+ L +M K I PD VT++ +I+G C++G V
Sbjct: 226 GISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVE 285
Query: 370 HAWELVD 376
A +++D
Sbjct: 286 RAKKILD 292
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 143/277 (51%), Gaps = 1/277 (0%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
+N +L+SL + L ++ +SPDI+T L+N YC + A + ++
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
+ G PD T+T+ + G C +V A + + G ++V+Y LI GL + +
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 160 AALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
AL L+ +++ P+V YT++I + C S+A NL+ +M + PD Y LI
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVK 279
FC L EA+ LL+ M+ + P+ T+N L+ K+ NV +A +L+ M++Q +
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKK-NVHKAMGLLSKMLEQNLV 361
Query: 280 PDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
PD+ITYN+L+ G C ++ A + + M + G+ PN
Sbjct: 362 PDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 166/345 (48%), Gaps = 8/345 (2%)
Query: 38 IEFNKILTSLVKMKHYPTA-ISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLA 96
+ F+ ++ + KH T+ SL L I ++ +TIL+ CN +
Sbjct: 44 LSFSDWISRIPNFKHNVTSYASLVTLLCSQEIPYEVPKITILMIKSCNSVRDALFVVDFC 103
Query: 97 KILKRG------YRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILIN 150
+ +++G Y+ + L+ L G V+ + + ++ D T+ L+N
Sbjct: 104 RTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVN 163
Query: 151 GLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLP 210
G CK+G A Q + + PD YT I C+ K V A+ ++ EM
Sbjct: 164 GYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHR 223
Query: 211 DVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVL 270
+ +Y LIYG ++ EA LL +M N P+ T+ +L+DAL G EA +
Sbjct: 224 NEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLF 283
Query: 271 AVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKT 330
M + G+KPD Y L+ +C +++A + M + G+ PNV +Y+ +I G CK
Sbjct: 284 KQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK- 342
Query: 331 KKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
K V +A+ LL++M +N++PD +TY++LI G C SG + A+ L+
Sbjct: 343 KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLL 387
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 132/258 (51%), Gaps = 1/258 (0%)
Query: 24 IFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYC 83
++ +L +P I FN ++ K+ + A L G PD FT T I +C
Sbjct: 142 LYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHC 201
Query: 84 NQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQV 143
+ ++ +AF V ++ + G + +++T L+ GL ++ AL + +
Sbjct: 202 RRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVR 261
Query: 144 TYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEM 203
TY +LI+ LC GQ A+ L +Q+ +KPD MYT++I SFC + +A L M
Sbjct: 262 TYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHM 321
Query: 204 LARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNV 263
L ++P+V TYNALI GFC + +A LL +M+ +N+ PD T+N L+ GN+
Sbjct: 322 LENGLMPNVITYNALIKGFC-KKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNL 380
Query: 264 KEAKTVLAVMMKQGVKPD 281
A +L++M + G+ P+
Sbjct: 381 DSAYRLLSLMEESGLVPN 398
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 138/282 (48%), Gaps = 10/282 (3%)
Query: 81 CYCNQAQITSAFSVLAKILKRGY--------RPDTITFTTLMKGLCLNGQVQTALQFHDH 132
CY N + F ++ + +KR Y PD TF TL+ G C G V A Q+
Sbjct: 122 CYNNLLSSLARFGLVEE-MKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTW 180
Query: 133 VVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKL 192
++ G D TY I G C+ + AA ++ +++ + YT +I+ + K
Sbjct: 181 LIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKK 240
Query: 193 VSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNI 252
+ +A +L +M P+V TY LI C Q EA L +M I PD + +
Sbjct: 241 IDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTV 300
Query: 253 LVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG 312
L+ + + EA +L M++ G+ P++ITYN+L+ G+C V+KA + + M ++
Sbjct: 301 LIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFC-KKNVHKAMGLLSKMLEQN 359
Query: 313 IAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVT 354
+ P++ +Y+ +I G C + +D A LL+ M+ ++P+ T
Sbjct: 360 LVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 127/265 (47%), Gaps = 27/265 (10%)
Query: 119 LNGQVQTALQFHDHVVA-QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDV 177
LN QTAL F D + F+ + +Y L+ LC ++I ++ K +
Sbjct: 36 LNLDPQTALSFSDWISRIPNFKHNVTSYASLVTLLCS-----------QEIPYEVPKITI 84
Query: 178 EMY--------TIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLK 229
M + + FC+ D++ + ++ + YN L+ ++
Sbjct: 85 LMIKSCNSVRDALFVVDFCRTMRKGDSFEIKYKLTPK-------CYNNLLSSLARFGLVE 137
Query: 230 EATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLM 289
E +L EM+ + PD YTFN LV+ K G V EAK + +++ G PD TY S +
Sbjct: 138 EMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFI 197
Query: 290 DGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNII 349
G+C EV+ A +F M Q G N SY+ +I GL + KK+DEAL+LL +M N
Sbjct: 198 TGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCC 257
Query: 350 PDTVTYSSLIDGLCKSGRVSHAWEL 374
P+ TY+ LID LC SG+ S A L
Sbjct: 258 PNVRTYTVLIDALCGSGQKSEAMNL 282
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 1/196 (0%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
+ D A +F + + + + +++ L + K A+SL ++ P++ T
Sbjct: 204 KEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTY 263
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
T+LI+ C Q + A ++ ++ + G +PD +T L++ C + A +H++
Sbjct: 264 TVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLE 323
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
G + +TY LI G CK +A L + ++ LV PD+ Y +I C +
Sbjct: 324 NGLMPNVITYNALIKGFCKKNVHKAMGLLSKMLEQNLV-PDLITYNTLIAGQCSSGNLDS 382
Query: 196 AYNLYSEMLARRVLPD 211
AY L S M ++P+
Sbjct: 383 AYRLLSLMEESGLVPN 398
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 170/361 (47%), Gaps = 3/361 (0%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKH-YPTAISLSHQLDFTGISPDIFTLTIL 78
+AV++F ++ P +I +N IL KM + SL ++ GI+PD +T L
Sbjct: 226 EAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTL 285
Query: 79 INCYCNQAQI-TSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
I C C + + A V ++ G+ D +T+ L+ + + + A++ + +V G
Sbjct: 286 ITC-CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNG 344
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
F VTY LI+ + G A++L Q+ + KPDV YT ++ F + V A
Sbjct: 345 FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM 404
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
+++ EM P++ T+NA I + + E K+ DE+ + PD T+N L+
Sbjct: 405 SIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVF 464
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
G+ G E V M + G P+ T+N+L+ Y +A ++ M G+ P++
Sbjct: 465 GQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDL 524
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDD 377
+Y+ ++ L + +++ +LAEM+ P+ +TY SL+ + L ++
Sbjct: 525 STYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEE 584
Query: 378 V 378
V
Sbjct: 585 V 585
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 173/395 (43%), Gaps = 35/395 (8%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+ A+SIF + P I FN + + + + +++ G+SPDI T L
Sbjct: 401 ESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTL 460
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
+ + + V ++ + G+ P+ TF TL+ G + A+ + ++ G
Sbjct: 461 LAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGV 520
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDK------- 191
D TY ++ L + G + +++ +++ KP+ Y ++H++ K
Sbjct: 521 TPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHS 580
Query: 192 ----------------------------LVSDAYNLYSEMLARRVLPDVFTYNALIYGFC 223
L+ +A +SE+ R PD+ T N+++ +
Sbjct: 581 LAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYG 640
Query: 224 IVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDII 283
+ +A +LD M + P T+N L+ + + +++ +L ++ +G+KPDII
Sbjct: 641 RRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDII 700
Query: 284 TYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM 343
+YN+++ YC + + A IF+ M GI P+V +Y+ I +EA+ ++ M
Sbjct: 701 SYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYM 760
Query: 344 DCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
P+ TY+S++DG CK R A V+D+
Sbjct: 761 IKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 169/373 (45%), Gaps = 40/373 (10%)
Query: 43 ILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRG 102
I++ L K +A ++ + L G S D+++ T LI+ + N + A +V K+ + G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 103 YRPDTITF-----------------TTLMKGL------------------CLNGQV-QTA 126
+P IT+ T+L++ + C G + Q A
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 127 LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS 186
Q + + A GF D+VTY L++ K + + A++++ ++ P + Y +I +
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
+ +D ++ +A L ++M + PDVFTY L+ GF +++ A + +EM P+
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN 418
Query: 247 AYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFN 306
TFN + G G E + + G+ PDI+T+N+L+ + ++ +F
Sbjct: 419 ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK 478
Query: 307 SMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
M + G P +++ +I+ + ++A+ + M + PD TY++++ L + G
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538
Query: 367 RVSHAWELVDDVI 379
WE + V+
Sbjct: 539 ----MWEQSEKVL 547
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 166/360 (46%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D+A+ + N++ P + + +L+ + +A+S+ ++ G P+I T
Sbjct: 366 DEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAF 425
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I Y N+ + T + +I G PD +T+ TL+ NG + GF
Sbjct: 426 IKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGF 485
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
++ T+ LI+ + G A+ + R++ V PD+ Y ++ + + + +
Sbjct: 486 VPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEK 545
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
+ +EM R P+ TY +L++ + ++ L +E+ + I P A LV
Sbjct: 546 VLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCS 605
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
K + EA+ + + ++G PDI T NS++ Y V KA + + M +RG P++
Sbjct: 606 KCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMA 665
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+Y+ ++ ++ ++ +L E+ K I PD ++Y+++I C++ R+ A + ++
Sbjct: 666 TYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM 725
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 151/326 (46%), Gaps = 5/326 (1%)
Query: 58 SLSHQLDFTGISPD-IFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKG 116
+L + G+SP L LI + Q+ S S L + K + +KG
Sbjct: 85 NLGKPWSYHGLSPQGQQVLRSLIEPNFDSGQLDSVLSELFEPFKDKPESTSSELLAFLKG 144
Query: 117 LCLNGQVQTALQFHDHVVAQG---FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLV 173
L + + AL+ D + Q LD I+I+ L K G+ +A + +Q
Sbjct: 145 LGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGF 204
Query: 174 KPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFC-IVSQLKEAT 232
DV YT +I +F +A N++ +M P + TYN ++ F + + + T
Sbjct: 205 SLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKIT 264
Query: 233 KLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGY 292
L+++M + I PDAYT+N L+ + +EA V M G D +TYN+L+D Y
Sbjct: 265 SLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVY 324
Query: 293 CLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDT 352
+A + N M G +P++ +Y+ +I+ + +DEA+ L +M K PD
Sbjct: 325 GKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 384
Query: 353 VTYSSLIDGLCKSGRVSHAWELVDDV 378
TY++L+ G ++G+V A + +++
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEM 410
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/395 (20%), Positives = 174/395 (44%), Gaps = 35/395 (8%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A +F + + + +N +L K A+ + +++ G SP I T LI
Sbjct: 297 EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLI 356
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ Y + A + ++ ++G +PD T+TTL+ G G+V++A+ + + G +
Sbjct: 357 SAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCK 416
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
+ T+ I G+ +++ +I + PD+ + ++ F ++ + S+ +
Sbjct: 417 PNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGV 476
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+ EM +P+ T+N LI + ++A + M+ + PD T+N ++ AL +
Sbjct: 477 FKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR 536
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVN-------------------- 299
G ++++ VLA M KP+ +TY SL+ Y E+
Sbjct: 537 GGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVL 596
Query: 300 ---------------KAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMD 344
+A+ F+ + +RG +P++ + + M++ + + V +A +L M
Sbjct: 597 LKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMK 656
Query: 345 CKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+ P TY+SL+ +S + E++ +++
Sbjct: 657 ERGFTPSMATYNSLMYMHSRSADFGKSEEILREIL 691
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 96/194 (49%), Gaps = 2/194 (1%)
Query: 54 PTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTL 113
P A +L G SPDI TL +++ Y + + A VL + +RG+ P T+ +L
Sbjct: 611 PEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSL 670
Query: 114 MKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLV 173
M + + + ++A+G + D ++Y +I C+ + R A ++ +++ +
Sbjct: 671 MYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGI 730
Query: 174 KPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATK 233
PDV Y I S+ D + +A + M+ P+ TYN+++ G+C +++ EA
Sbjct: 731 VPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKL 790
Query: 234 LLDEMVTKNIHPDA 247
++++ +N+ P A
Sbjct: 791 FVEDL--RNLDPHA 802
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 172/362 (47%), Gaps = 4/362 (1%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N D+ S L+ P + ++L L K AI + + +GI PD T
Sbjct: 86 NLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYT 145
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
L+N C + + A ++ K+ GY +T+T+ L++GLC+ G + +LQF + ++ +
Sbjct: 146 YLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQK 205
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G + TY L+ K T A++L+ +I + +P++ Y +++ FCK+ DA
Sbjct: 206 GLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDA 265
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
L+ E+ A+ +V +YN L+ C + +EA LL EM + P T+NIL+++
Sbjct: 266 MALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINS 325
Query: 257 LGKEGNVKEAKTVLAVMMK--QGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
L G ++A VL M K + +YN ++ C +V+ + M R
Sbjct: 326 LAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCK 385
Query: 315 PNVHSYSIMINGLCK-TKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWE 373
PN +Y+ I LC+ KV EA ++ + K Y S+I LC+ G A++
Sbjct: 386 PNEGTYN-AIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQ 444
Query: 374 LV 375
L+
Sbjct: 445 LL 446
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 168/329 (51%), Gaps = 40/329 (12%)
Query: 55 TAISLSHQ---LDFTGIS--PDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTIT 109
T I+LS + TG S PD+ + + + ++ ++ +FS L ++ G++P+
Sbjct: 49 TQITLSPKDSAFTITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAH 108
Query: 110 FTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQ 169
T L+ LC +++ A++ + +V+ G D Y L+N LCK G A+QL+ +++
Sbjct: 109 STQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKME 168
Query: 170 GQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLK 229
H + + + TYNAL+ G C++ L
Sbjct: 169 D--------------HGYPSNTV---------------------TYNALVRGLCMLGSLN 193
Query: 230 EATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLM 289
++ + ++ ++ K + P+A+T++ L++A KE EA +L ++ +G +P++++YN L+
Sbjct: 194 QSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLL 253
Query: 290 DGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNII 349
G+C + A +F +P +G NV SY+I++ LC + +EA +LLAEMD +
Sbjct: 254 TGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRA 313
Query: 350 PDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
P VTY+ LI+ L GR A +++ ++
Sbjct: 314 PSVVTYNILINSLAFHGRTEQALQVLKEM 342
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 165/339 (48%), Gaps = 7/339 (2%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
R D+AV + + ++ P ++ +N +LT K A++L +L G ++ +
Sbjct: 225 RGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSY 284
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
IL+ C C + A S+LA++ P +T+ L+ L +G+ + ALQ ++
Sbjct: 285 NILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKE-MS 343
Query: 136 QG---FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCK-DK 191
+G FR+ +Y +I LCK G+ ++ + ++ + KP+ Y I S C+ +
Sbjct: 344 KGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYN-AIGSLCEHNS 402
Query: 192 LVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFN 251
V +A+ + + ++ Y ++I C A +LL EM PDA+T++
Sbjct: 403 KVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYS 462
Query: 252 ILVDALGKEGNVKEAKTVLAVMMK-QGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQ 310
L+ L EG A VL++M + + KP + +N+++ G C + + A ++F M +
Sbjct: 463 ALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVE 522
Query: 311 RGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNII 349
+ PN +Y+I++ G+ +++ A +L E+ + +I
Sbjct: 523 KKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVI 561
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 76/153 (49%), Gaps = 2/153 (1%)
Query: 228 LKEATKLLDEMVTKNIHPD-AYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYN 286
L ++ L+ +VT P+ A++ +L D L K +K+A V+ +M+ G+ PD Y
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYD-LCKANRLKKAIRVIELMVSSGIIPDASAYT 145
Query: 287 SLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCK 346
L++ C V A + M G N +Y+ ++ GLC ++++L + + K
Sbjct: 146 YLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQK 205
Query: 347 NIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+ P+ TYS L++ K A +L+D++I
Sbjct: 206 GLAPNAFTYSFLLEAAYKERGTDEAVKLLDEII 238
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 149/298 (50%)
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
C N + L KI +RGY PD+ TF M L + + D V++G +
Sbjct: 329 CLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKP 388
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
Y +L+ L + + ++Q+ + V Y +I CK + + +A
Sbjct: 389 GFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFL 448
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
+EM R + P++ T+N + G+ + +K+ +L++++ PD TF+++++ L +
Sbjct: 449 TEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRA 508
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSY 320
+K+A M++ G++P+ ITYN L+ C + +++ +F M + G++P++++Y
Sbjct: 509 KEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAY 568
Query: 321 SIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+ I CK +KV +A LL M + PD TYS+LI L +SGR S A E+ +
Sbjct: 569 NATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSI 626
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 176/424 (41%), Gaps = 72/424 (16%)
Query: 28 LLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQ 87
L M P+ + +N ++ +LVK A Q+ G PD FT ILI+ C +
Sbjct: 173 FLGMKPSTRL--YNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGV 230
Query: 88 ITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRI 147
+ A ++ ++ + G RP+ T+T L+ G + G+V AL+ + + + ++ T R
Sbjct: 231 VDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRT 290
Query: 148 LINGL------CKMGQ-----------------------------TRAALQLMRQIQGQL 172
++G+ CK + + Q +R+I +
Sbjct: 291 FVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERG 350
Query: 173 VKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLP---------------------- 210
PD + + K + + ++ ++R V P
Sbjct: 351 YIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGD 410
Query: 211 -------------DVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
V++YNA+I C +++ A L EM + I P+ TFN +
Sbjct: 411 RYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGY 470
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
G+VK+ VL ++ G KPD+IT++ +++ C E+ A D F M + GI PN
Sbjct: 471 SVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNE 530
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDD 377
+Y+I+I C T D ++ L A+M + PD Y++ I CK +V A EL+
Sbjct: 531 ITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKT 590
Query: 378 VIFI 381
++ I
Sbjct: 591 MLRI 594
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 132/265 (49%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+ IF+ + P + ++ +L+ + + Q+ G+ +++ +I
Sbjct: 373 ETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVI 432
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+C C +I +A L ++ RG P+ +TF T + G + G V+ + ++ GF+
Sbjct: 433 DCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFK 492
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
D +T+ ++IN LC+ + + A +++ ++P+ Y I+I S C + L
Sbjct: 493 PDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKL 552
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+++M + PD++ YNA I FC + ++K+A +LL M+ + PD +T++ L+ AL +
Sbjct: 553 FAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSE 612
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIIT 284
G EA+ + + + + G PD T
Sbjct: 613 SGRESEAREMFSSIERHGCVPDSYT 637
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 132/288 (45%)
Query: 67 GISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA 126
G PD T ++C + + + RG +P + L++ L +
Sbjct: 350 GYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEG 409
Query: 127 LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS 186
++ + G +Y +I+ LCK + A + ++Q + + P++ + +
Sbjct: 410 DRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSG 469
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
+ V + + ++L PDV T++ +I C ++K+A EM+ I P+
Sbjct: 470 YSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPN 529
Query: 247 AYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFN 306
T+NIL+ + G+ + + A M + G+ PD+ YN+ + +C + +V KA+++
Sbjct: 530 EITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLK 589
Query: 307 SMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVT 354
+M + G+ P+ +YS +I L ++ + EA + + ++ +PD+ T
Sbjct: 590 TMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYT 637
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 135/290 (46%), Gaps = 8/290 (2%)
Query: 82 YCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLD 141
YCN V A+I G +P T + ++ L + + A + + G + D
Sbjct: 163 YCND--------VFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPD 214
Query: 142 QVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYS 201
+ TY ILI+G+CK G A++L++Q++ + +P+V YTI+I F V +A
Sbjct: 215 RFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLE 274
Query: 202 EMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEG 261
M R++ P+ T ++G +A ++L + K+ + ++ ++ L
Sbjct: 275 MMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNS 334
Query: 262 NVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYS 321
KE L + ++G PD T+N+ M ++ + IF+ RG+ P + Y
Sbjct: 335 MAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYL 394
Query: 322 IMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
+++ L ++ E L +M ++ +Y+++ID LCK+ R+ +A
Sbjct: 395 VLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENA 444
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 115/277 (41%)
Query: 103 YRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAAL 162
Y D + L L G + +++ + G+R+ +LI ++G +
Sbjct: 106 YAKDQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCN 165
Query: 163 QLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGF 222
+ QI +KP +Y +I + K + AY + +M + PD FTYN LI+G
Sbjct: 166 DVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGV 225
Query: 223 CIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDI 282
C + EA +L+ +M + P+ +T+ IL+D G V EA L +M + + P+
Sbjct: 226 CKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNE 285
Query: 283 ITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAE 342
T + + G KA ++ ++ Y ++ L E L +
Sbjct: 286 ATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRK 345
Query: 343 MDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+ + IPD+ T+++ + L K + + D +
Sbjct: 346 IGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFV 382
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 59/129 (45%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
DA F +L P I +N ++ S ++ L ++ G+SPD++ I
Sbjct: 513 DAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATI 572
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+C ++ A +L +L+ G +PD T++TL+K L +G+ A + + G
Sbjct: 573 QSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCV 632
Query: 140 LDQVTYRIL 148
D T R++
Sbjct: 633 PDSYTKRLV 641
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 178/359 (49%), Gaps = 7/359 (1%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D+A ++ R+ P + +N +++ K + L ++ +G+SPD+++ L
Sbjct: 65 DEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTL 124
Query: 79 INCYCNQAQITSAFSVLAK-ILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
++CY + AF +L + I G P T+ L+ LC +G A++ H+ ++
Sbjct: 125 MSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR- 183
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
+ + +TY ILINGLCK + + +MR+++ P+ YT ++ + K K +
Sbjct: 184 VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGL 243
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHP-DAYTFNILVDA 256
L+ +M D F A++ + +EA + + E+V D ++N L++
Sbjct: 244 QLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNL 303
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
K+GN+ +L + +G+KPD T+ +++G + A+ + + G+ P+
Sbjct: 304 YFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPS 363
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
V + + +I+GLCK VD A+ L A M+ + D TY+S++ LCK GR+ A +L+
Sbjct: 364 VVTCNCLIDGLCKAGHVDRAMRLFASME----VRDEFTYTSVVHNLCKDGRLVCASKLL 418
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 174/361 (48%), Gaps = 3/361 (0%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
RN + A ++ +R+ P +I +N ++ + A +++ ++ GI PD+ T
Sbjct: 27 RNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTY 86
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQ-FHDHVV 134
LI+ + + ++L G PD ++ TLM G+ A + H+ +
Sbjct: 87 NSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIH 146
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
G TY IL++ LCK G T A++L + ++ + VKP++ Y I+I+ CK + V
Sbjct: 147 LAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVG 205
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
+ E+ P+ TY ++ + ++++ +L +M + D + +V
Sbjct: 206 SVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVV 265
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKP-DIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
AL K G +EA + +++ G + DI++YN+L++ Y ++ D+ + +G+
Sbjct: 266 SALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGL 325
Query: 314 APNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWE 373
P+ ++++I++NGL A LA + + P VT + LIDGLCK+G V A
Sbjct: 326 KPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMR 385
Query: 374 L 374
L
Sbjct: 386 L 386
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 133/262 (50%), Gaps = 14/262 (5%)
Query: 127 LQFHDHVVAQGFRL----DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTI 182
L+ + ++ G RL D +TY LI G + A + R+++ ++PDV Y
Sbjct: 29 LERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNS 88
Query: 183 IIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKN 242
+I K+ +++ L+ EML + PD+++YN L+ + + + EA K+L E +
Sbjct: 89 LISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHE----D 144
Query: 243 IH-----PDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSE 297
IH P T+NIL+DAL K G+ A + +K VKP+++TYN L++G C
Sbjct: 145 IHLAGLVPGIDTYNILLDALCKSGHTDNAIELFK-HLKSRVKPELMTYNILINGLCKSRR 203
Query: 298 VNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSS 357
V + + + G PN +Y+ M+ KTK++++ L L +M + D +
Sbjct: 204 VGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCA 263
Query: 358 LIDGLCKSGRVSHAWELVDDVI 379
++ L K+GR A+E + +++
Sbjct: 264 VVSALIKTGRAEEAYECMHELV 285
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 106/205 (51%), Gaps = 4/205 (1%)
Query: 168 IQGQLVKPDV--EMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIV 225
++G + P + ++ I ++S CK + + A L + + VLPDV TYN LI G+
Sbjct: 2 VRGLMKFPGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRF 61
Query: 226 SQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITY 285
+ EA + M I PD T+N L+ K + + M+ G+ PD+ +Y
Sbjct: 62 IGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSY 121
Query: 286 NSLMDGYCLVSEVNKA-KDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMD 344
N+LM Y + +A K + + G+ P + +Y+I+++ LCK+ D A+ L +
Sbjct: 122 NTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLK 181
Query: 345 CKNIIPDTVTYSSLIDGLCKSGRVS 369
+ + P+ +TY+ LI+GLCKS RV
Sbjct: 182 SR-VKPELMTYNILINGLCKSRRVG 205
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 83/160 (51%), Gaps = 1/160 (0%)
Query: 216 NALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMK 275
N + C L+ A LL + + + PD T+N L+ + + EA V M +
Sbjct: 17 NISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMRE 76
Query: 276 QGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDE 335
G++PD+ TYNSL+ G +N+ +F+ M G++P++ SY+ +++ K + E
Sbjct: 77 AGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGE 136
Query: 336 ALNLLAE-MDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
A +L E + ++P TY+ L+D LCKSG +A EL
Sbjct: 137 AFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIEL 176
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 116/264 (43%), Gaps = 6/264 (2%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
+ D+A+ +F L + P ++ +N ++ L K + + + +L +G +P+ T T
Sbjct: 169 HTDNAIELFKHL-KSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYT 227
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
++ Y +I + K+ K GY D ++ L G+ + A + +V
Sbjct: 228 TMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRS 287
Query: 137 GFR-LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
G R D V+Y L+N K G A L+ +I+ + +KPD +TII++
Sbjct: 288 GTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGG 347
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
A + + + P V T N LI G C + A +L M + D +T+ +V
Sbjct: 348 AEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR----DEFTYTSVVH 403
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVK 279
L K+G + A +L +G+K
Sbjct: 404 NLCKDGRLVCASKLLLSCYNKGMK 427
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 77/132 (58%)
Query: 250 FNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMP 309
NI V++L K N++ A+T+L ++ GV PD+ITYN+L+ GY +++A + M
Sbjct: 16 LNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMR 75
Query: 310 QRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVS 369
+ GI P+V +Y+ +I+G K ++ L L EM + PD +Y++L+ K GR
Sbjct: 76 EAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHG 135
Query: 370 HAWELVDDVIFI 381
A++++ + I +
Sbjct: 136 EAFKILHEDIHL 147
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 144/269 (53%), Gaps = 5/269 (1%)
Query: 104 RPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQ 163
+PD T+ L+ G +G AL+ D +V + + VT+ LI+GLCK + + AL+
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 164 L---MRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIY 220
+ M ++ G V+P V +Y +I + C+ +S A+ L E ++ D Y+ LI
Sbjct: 209 MKHDMLKVYG--VRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLIS 266
Query: 221 GFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKP 280
+ E + +L+EM K PD T+N+L++ E + + A VL M+++G+KP
Sbjct: 267 SLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKP 326
Query: 281 DIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLL 340
D+I+YN ++ + + + +A +F MP+RG +P+ SY I+ +GLC+ + +EA +L
Sbjct: 327 DVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVIL 386
Query: 341 AEMDCKNIIPDTVTYSSLIDGLCKSGRVS 369
EM K P + LC+SG++
Sbjct: 387 DEMLFKGYKPRRDRLEGFLQKLCESGKLE 415
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 132/241 (54%), Gaps = 1/241 (0%)
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
D TY ILI+G + G AL+L ++ + VKP + +IH CKD V +A +
Sbjct: 151 DACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMK 210
Query: 201 SEML-ARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+ML V P V Y +LI C + +L A KL DE I DA ++ L+ +L K
Sbjct: 211 HDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIK 270
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
G E +L M ++G KPD +TYN L++G+C+ ++ A + + M ++G+ P+V S
Sbjct: 271 AGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVIS 330
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
Y++++ + KK +EA L +M + PDT++Y + DGLC+ + A ++D+++
Sbjct: 331 YNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEML 390
Query: 380 F 380
F
Sbjct: 391 F 391
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 152/307 (49%), Gaps = 2/307 (0%)
Query: 70 PDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQF 129
PD T ILI+ A + +++K+ +P +TF TL+ GLC + +V+ AL+
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 130 -HDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFC 188
HD + G R Y LI LC++G+ A +L + +K D +Y+ +I S
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 189 KDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAY 248
K ++ + EM + PD TYN LI GFC+ + + A ++LDEMV K + PD
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVI 329
Query: 249 TFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM 308
++N+++ + +EA + M ++G PD ++Y + DG C + +A I + M
Sbjct: 330 SYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEM 389
Query: 309 PQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRV 368
+G P + LC++ K++ +++ + + I D +S +I +CK +
Sbjct: 390 LFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLH-RGIAGDADVWSVMIPTMCKEPVI 448
Query: 369 SHAWELV 375
S + +L+
Sbjct: 449 SDSIDLL 455
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 118/297 (39%), Gaps = 77/297 (25%)
Query: 160 AALQLMRQIQGQLVKP-----------DV------------EMYTIIIH----------- 185
AA++L R + P D+ E+ +++H
Sbjct: 24 AAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTE 83
Query: 186 -SFC-------KDKLVSDAYNLYSEMLARRVL---------------------------- 209
FC + KL S A +++ EM R
Sbjct: 84 IIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSS 143
Query: 210 ------PDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNV 263
PD TYN LI+G +A KL DEMV K + P TF L+ L K+ V
Sbjct: 144 IDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRV 203
Query: 264 KEAKTVLAVMMK-QGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSI 322
KEA + M+K GV+P + Y SL+ C + E++ A + + + I + YS
Sbjct: 204 KEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYST 263
Query: 323 MINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+I+ L K + +E +L EM K PDTVTY+ LI+G C A ++D+++
Sbjct: 264 LISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMV 320
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 296 SEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTY 355
E+ K K+ +S+ + G P+ +Y+I+I+G ++ D+AL L EM K + P VT+
Sbjct: 132 GELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTF 190
Query: 356 SSLIDGLCKSGRVSHAWELVDDVIFIFNVWMS---YAKAIKLTRQL 398
+LI GLCK RV A ++ D++ ++ V + YA IK Q+
Sbjct: 191 GTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQI 236
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 77/183 (42%), Gaps = 36/183 (19%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
+++ A + + ++ P +I +N IL ++K + A L + G SPD +
Sbjct: 308 DSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYR 367
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
I+ + C Q A +L ++L +GY+P ++ LC +G+++
Sbjct: 368 IVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEIL---------- 417
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
++ L R I G D ++++++I + CK+ ++SD+
Sbjct: 418 ---------------------SKVISSLHRGIAG-----DADVWSVMIPTMCKEPVISDS 451
Query: 197 YNL 199
+L
Sbjct: 452 IDL 454
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 173/357 (48%), Gaps = 2/357 (0%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N +A+ + ++ P ++ N +L++ + Y A+S + + PD T
Sbjct: 228 NWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFN 287
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGY--RPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
I+I C Q + A + + ++ RPD +TFT++M + G+++ + +V
Sbjct: 288 IIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV 347
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
A+G + + V+Y L+ G + AL ++ I+ + PDV YT +++S+ + +
Sbjct: 348 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 407
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
A ++ M R P+V TYNALI + L EA ++ +M I P+ + L+
Sbjct: 408 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 467
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
A + TVL+ +G+ + YNS + Y +E+ KA ++ SM ++ +
Sbjct: 468 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 527
Query: 315 PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
+ +++I+I+G C+ K EA++ L EM+ +I YSS++ K G+V+ A
Sbjct: 528 ADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEA 584
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 166/356 (46%), Gaps = 4/356 (1%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A +F + + S P ++ ++ + + + A++L + I+P T L
Sbjct: 160 DQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNL 219
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
IN + A V K+ G PD +T ++ Q AL + + +
Sbjct: 220 INACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKV 279
Query: 139 RLDQVTYRILINGLCKMGQTRAALQL---MRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
R D T+ I+I L K+GQ+ AL L MR+ + + +PDV +T I+H + + +
Sbjct: 280 RPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAE-CRPDVVTFTSIMHLYSVKGEIEN 338
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
++ M+A + P++ +YNAL+ + + A +L ++ I PD ++ L++
Sbjct: 339 CRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLN 398
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
+ G+ +AK V +M K+ KP+++TYN+L+D Y + +A +IF M Q GI P
Sbjct: 399 SYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKP 458
Query: 316 NVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
NV S ++ ++KK +L+ + I +T Y+S I + + A
Sbjct: 459 NVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKA 514
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 149/306 (48%), Gaps = 4/306 (1%)
Query: 71 DIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFH 130
DI+ + I ++ N + A + ++ K +PD T+ L+ GQ + A+
Sbjct: 144 DIYNMMIRLHARHNW--VDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLM 201
Query: 131 DHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKD 190
D ++ + TY LIN G R AL++ +++ V PD+ + I++ ++
Sbjct: 202 DDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSG 261
Query: 191 KLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIH--PDAY 248
+ S A + + M +V PD T+N +IY + Q +A L + M K PD
Sbjct: 262 RQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVV 321
Query: 249 TFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM 308
TF ++ +G ++ + V M+ +G+KP+I++YN+LM Y + A + +
Sbjct: 322 TFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDI 381
Query: 309 PQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRV 368
Q GI P+V SY+ ++N ++++ +A + M + P+ VTY++LID +G +
Sbjct: 382 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFL 441
Query: 369 SHAWEL 374
+ A E+
Sbjct: 442 AEAVEI 447
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 173/400 (43%), Gaps = 37/400 (9%)
Query: 14 SIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISL--SHQLDFTGISPD 71
S R A+S F + P FN I+ L K+ A+ L S + PD
Sbjct: 260 SGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPD 319
Query: 72 IFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHD 131
+ T T +++ Y + +I + +V ++ G +P+ +++ LM ++G TAL
Sbjct: 320 VVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLG 379
Query: 132 HVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDK 191
+ G D V+Y L+N + Q A ++ ++ + KP+V Y +I ++ +
Sbjct: 380 DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNG 439
Query: 192 LVSDAYNLYSEMLARRVLPDVFT-----------------------------------YN 216
+++A ++ +M + P+V + YN
Sbjct: 440 FLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYN 499
Query: 217 ALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQ 276
+ I + ++L++A L M K + D+ TF IL+ + EA + L M
Sbjct: 500 SAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDL 559
Query: 277 GVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEA 336
+ Y+S++ Y +V +A+ IFN M G P+V +Y+ M++ ++K +A
Sbjct: 560 SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKA 619
Query: 337 LNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
L EM+ I PD++ S+L+ K G+ S+ + L+D
Sbjct: 620 CELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMD 659
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/392 (19%), Positives = 174/392 (44%), Gaps = 19/392 (4%)
Query: 3 SFLRLKNSLPPSIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQ 62
S+ L NS S R A +F + + P ++ +N ++ + A+ + Q
Sbjct: 392 SYTCLLNSYGRS-RQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQ 450
Query: 63 LDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQ 122
++ GI P++ ++ L+ + + +VL+ RG +T + + + +
Sbjct: 451 MEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAE 510
Query: 123 VQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTI 182
++ A+ + + + + D VT+ ILI+G C+M + A+ +++++ + E+Y+
Sbjct: 511 LEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSS 570
Query: 183 IIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKN 242
++ ++ K V++A +++++M PDV Y ++++ + + +A +L EM
Sbjct: 571 VLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANG 630
Query: 243 IHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAK 302
I PD+ + L+ A K G ++ +M ++ + + + + E +A
Sbjct: 631 IEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAI 690
Query: 303 DIFNSMPQRGIAPNVHSYSI-----MINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSS 357
D+ M P + S SI M++ K+ KV+ + L ++ + + TY+
Sbjct: 691 DLIQMMD-----PYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAI 745
Query: 358 LIDGLCKSGRVSHAWELVDDVIFIFNVWMSYA 389
L++ L G E+++ WMS A
Sbjct: 746 LLEHLLAVGNWRKYIEVLE--------WMSGA 769
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 84/164 (51%)
Query: 215 YNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMM 274
YN +I + + +A L EM + PDA T++ L++A G+ G + A ++ M+
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 275 KQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVD 334
+ + P TYN+L++ +A ++ M G+ P++ +++I+++ ++
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 335 EALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+AL+ M + PDT T++ +I L K G+ S A +L + +
Sbjct: 266 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM 309
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 163/356 (45%), Gaps = 36/356 (10%)
Query: 16 RNADDAVSIFNRLLRM-SPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFT 74
R D A+ F+ + R+ P + +N ++ VK A+ ++ PD+ T
Sbjct: 171 RKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCT 230
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
ILIN YC ++ A + ++ ++G P+ ++F TL++G +G+++ ++ ++
Sbjct: 231 FNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMI 290
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
G R + T IL++GLC+ G+ V
Sbjct: 291 ELGCRFSEATCEILVDGLCREGR-----------------------------------VD 315
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
DA L ++L +RVLP F Y +L+ C ++ A ++++E+ K P LV
Sbjct: 316 DACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLV 375
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
+ L K G ++A + MM G+ PD +T+N L+ C A + +G
Sbjct: 376 EGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYE 435
Query: 315 PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSH 370
P+ +Y ++++G K + E L+ EM K+++PD TY+ L+DGL +G+ S
Sbjct: 436 PDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSR 491
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 142/319 (44%), Gaps = 13/319 (4%)
Query: 79 INCYCNQAQITSA---FSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
I+ YC ++ A F + +++ +P+ + T++ G +G + AL+F+ +
Sbjct: 164 IDAYCRARKMDYALLAFDTMKRLIDG--KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGK 221
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
+ + D T+ ILING C+ + AL L R+++ + +P+V + +I F + +
Sbjct: 222 ERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEE 281
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
+ EM+ T L+ G C ++ +A L+ +++ K + P + + LV+
Sbjct: 282 GVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVE 341
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
L E A ++ + K+G P I +L++G KA M GI P
Sbjct: 342 KLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILP 401
Query: 316 NVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
+ ++++++ LC + +A L K PD TY L+ G K GR LV
Sbjct: 402 DSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLV 461
Query: 376 DDV--------IFIFNVWM 386
+++ IF +N M
Sbjct: 462 NEMLDKDMLPDIFTYNRLM 480
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 7/231 (3%)
Query: 145 YRILINGLCKMGQTRAAL----QLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
+R I+ C+ + AL + R I G KP+V +Y +++ + K + A Y
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDG---KPNVGVYNTVVNGYVKSGDMDKALRFY 216
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
M R PDV T+N LI G+C S+ A L EM K P+ +FN L+
Sbjct: 217 QRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSS 276
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSY 320
G ++E + M++ G + T L+DG C V+ A + + + + P+ Y
Sbjct: 277 GKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDY 336
Query: 321 SIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
++ LC K A+ ++ E+ K P + ++L++GL KSGR A
Sbjct: 337 GSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKA 387
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 109/208 (52%), Gaps = 6/208 (2%)
Query: 175 PDVE-MYTIIIHSFCKDKLVSDAYNLYSEMLARRVL---PDVFTYNALIYGFCIVSQLKE 230
P++E ++ I ++C+ + + A + M +R++ P+V YN ++ G+ + +
Sbjct: 154 PELEPIFRSAIDAYCRARKMDYALLAFDTM--KRLIDGKPNVGVYNTVVNGYVKSGDMDK 211
Query: 231 ATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMD 290
A + M + PD TFNIL++ + A + M ++G +P+++++N+L+
Sbjct: 212 ALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIR 271
Query: 291 GYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIP 350
G+ ++ + + M + G + + I+++GLC+ +VD+A L+ ++ K ++P
Sbjct: 272 GFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLP 331
Query: 351 DTVTYSSLIDGLCKSGRVSHAWELVDDV 378
Y SL++ LC + A E+++++
Sbjct: 332 SEFDYGSLVEKLCGENKAVRAMEMMEEL 359
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 173/357 (48%), Gaps = 2/357 (0%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N +A+ + ++ P ++ N +L++ + Y A+S + + PD T
Sbjct: 96 NWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFN 155
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGY--RPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
I+I C Q + A + + ++ RPD +TFT++M + G+++ + +V
Sbjct: 156 IIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV 215
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
A+G + + V+Y L+ G + AL ++ I+ + PDV YT +++S+ + +
Sbjct: 216 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 275
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
A ++ M R P+V TYNALI + L EA ++ +M I P+ + L+
Sbjct: 276 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 335
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
A + TVL+ +G+ + YNS + Y +E+ KA ++ SM ++ +
Sbjct: 336 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 395
Query: 315 PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
+ +++I+I+G C+ K EA++ L EM+ +I YSS++ K G+V+ A
Sbjct: 396 ADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEA 452
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 166/356 (46%), Gaps = 4/356 (1%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A +F + + S P ++ ++ + + + A++L + I+P T L
Sbjct: 28 DQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNL 87
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
IN + A V K+ G PD +T ++ Q AL + + +
Sbjct: 88 INACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKV 147
Query: 139 RLDQVTYRILINGLCKMGQTRAALQL---MRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
R D T+ I+I L K+GQ+ AL L MR+ + + +PDV +T I+H + + +
Sbjct: 148 RPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAE-CRPDVVTFTSIMHLYSVKGEIEN 206
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
++ M+A + P++ +YNAL+ + + A +L ++ I PD ++ L++
Sbjct: 207 CRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLN 266
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
+ G+ +AK V +M K+ KP+++TYN+L+D Y + +A +IF M Q GI P
Sbjct: 267 SYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKP 326
Query: 316 NVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
NV S ++ ++KK +L+ + I +T Y+S I + + A
Sbjct: 327 NVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKA 382
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 149/306 (48%), Gaps = 4/306 (1%)
Query: 71 DIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFH 130
DI+ + I ++ N + A + ++ K +PD T+ L+ GQ + A+
Sbjct: 12 DIYNMMIRLHARHNW--VDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLM 69
Query: 131 DHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKD 190
D ++ + TY LIN G R AL++ +++ V PD+ + I++ ++
Sbjct: 70 DDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSG 129
Query: 191 KLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIH--PDAY 248
+ S A + + M +V PD T+N +IY + Q +A L + M K PD
Sbjct: 130 RQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVV 189
Query: 249 TFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM 308
TF ++ +G ++ + V M+ +G+KP+I++YN+LM Y + A + +
Sbjct: 190 TFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDI 249
Query: 309 PQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRV 368
Q GI P+V SY+ ++N ++++ +A + M + P+ VTY++LID +G +
Sbjct: 250 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFL 309
Query: 369 SHAWEL 374
+ A E+
Sbjct: 310 AEAVEI 315
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 173/400 (43%), Gaps = 37/400 (9%)
Query: 14 SIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISL--SHQLDFTGISPD 71
S R A+S F + P FN I+ L K+ A+ L S + PD
Sbjct: 128 SGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPD 187
Query: 72 IFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHD 131
+ T T +++ Y + +I + +V ++ G +P+ +++ LM ++G TAL
Sbjct: 188 VVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLG 247
Query: 132 HVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDK 191
+ G D V+Y L+N + Q A ++ ++ + KP+V Y +I ++ +
Sbjct: 248 DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNG 307
Query: 192 LVSDAYNLYSEMLARRVLPDVFT-----------------------------------YN 216
+++A ++ +M + P+V + YN
Sbjct: 308 FLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYN 367
Query: 217 ALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQ 276
+ I + ++L++A L M K + D+ TF IL+ + EA + L M
Sbjct: 368 SAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDL 427
Query: 277 GVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEA 336
+ Y+S++ Y +V +A+ IFN M G P+V +Y+ M++ ++K +A
Sbjct: 428 SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKA 487
Query: 337 LNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
L EM+ I PD++ S+L+ K G+ S+ + L+D
Sbjct: 488 CELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMD 527
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/392 (19%), Positives = 174/392 (44%), Gaps = 19/392 (4%)
Query: 3 SFLRLKNSLPPSIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQ 62
S+ L NS S R A +F + + P ++ +N ++ + A+ + Q
Sbjct: 260 SYTCLLNSYGRS-RQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQ 318
Query: 63 LDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQ 122
++ GI P++ ++ L+ + + +VL+ RG +T + + + +
Sbjct: 319 MEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAE 378
Query: 123 VQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTI 182
++ A+ + + + + D VT+ ILI+G C+M + A+ +++++ + E+Y+
Sbjct: 379 LEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSS 438
Query: 183 IIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKN 242
++ ++ K V++A +++++M PDV Y ++++ + + +A +L EM
Sbjct: 439 VLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANG 498
Query: 243 IHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAK 302
I PD+ + L+ A K G ++ +M ++ + + + + E +A
Sbjct: 499 IEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAI 558
Query: 303 DIFNSMPQRGIAPNVHSYSI-----MINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSS 357
D+ M P + S SI M++ K+ KV+ + L ++ + + TY+
Sbjct: 559 DLIQMMD-----PYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAI 613
Query: 358 LIDGLCKSGRVSHAWELVDDVIFIFNVWMSYA 389
L++ L G E+++ WMS A
Sbjct: 614 LLEHLLAVGNWRKYIEVLE--------WMSGA 637
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 84/164 (51%)
Query: 215 YNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMM 274
YN +I + + +A L EM + PDA T++ L++A G+ G + A ++ M+
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 275 KQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVD 334
+ + P TYN+L++ +A ++ M G+ P++ +++I+++ ++
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 335 EALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+AL+ M + PDT T++ +I L K G+ S A +L + +
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM 177
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 170/352 (48%), Gaps = 4/352 (1%)
Query: 19 DDAVSIFNRLL---RMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
D +F+ LL R + P + F+ + + +K + A Q+ G P + +
Sbjct: 148 DLPAKVFDALLYSYRECDSTPRV-FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESC 206
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
++ Q ++ A ++ + P+ T +M G C +G++ ++ +
Sbjct: 207 NAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMER 266
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
GFR V+Y LI G C+ G +AL+L + ++P+V + +IH FC+ + +
Sbjct: 267 LGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQE 326
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
A ++ EM A V P+ TYN LI G+ + A + ++MV I D T+N L+
Sbjct: 327 ASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIF 386
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
L K+ ++A + + K+ + P+ T+++L+ G C+ ++ +++ SM + G P
Sbjct: 387 GLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHP 446
Query: 316 NVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGR 367
N +++++++ C+ + D A +L EM ++I D+ T + +GL G+
Sbjct: 447 NEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGK 498
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 163/338 (48%), Gaps = 3/338 (0%)
Query: 15 IRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFT 74
RNA D F ++ P + N ++SL+ A+ ++ ISP+ +T
Sbjct: 184 FRNATDT---FMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYT 240
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
L ++++ YC ++ +L + + G+R +++ TL+ G C G + +AL+ + +
Sbjct: 241 LNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMG 300
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
G + + VT+ LI+G C+ + + A ++ +++ V P+ Y +I+ + +
Sbjct: 301 KSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHE 360
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
A+ Y +M+ + D+ TYNALI+G C ++ ++A + + E+ +N+ P++ TF+ L+
Sbjct: 361 MAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
N + M++ G P+ T+N L+ +C + + A + M +R I
Sbjct: 421 MGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIP 480
Query: 315 PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDT 352
+ + + NGL K LL EM+ K + ++
Sbjct: 481 LDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQES 518
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 150/311 (48%), Gaps = 2/311 (0%)
Query: 69 SPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQ 128
+P +F L + + + +A ++ G+ P + M L G+V AL+
Sbjct: 167 TPRVFD--SLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALR 224
Query: 129 FHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFC 188
F+ + + T ++++G C+ G+ ++L++ ++ + Y +I C
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC 284
Query: 189 KDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAY 248
+ L+S A L + M + P+V T+N LI+GFC +L+EA+K+ EM N+ P+
Sbjct: 285 EKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTV 344
Query: 249 TFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM 308
T+N L++ ++G+ + A M+ G++ DI+TYN+L+ G C ++ KA +
Sbjct: 345 TYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKEL 404
Query: 309 PQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRV 368
+ + PN ++S +I G C K D L M P+ T++ L+ C++
Sbjct: 405 DKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDF 464
Query: 369 SHAWELVDDVI 379
A +++ +++
Sbjct: 465 DGASQVLREMV 475
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 97/229 (42%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A+ + N + + P ++ FN ++ + A + ++ ++P+ T LIN
Sbjct: 292 ALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLIN 351
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
Y Q AF ++ G + D +T+ L+ GLC + + A QF + +
Sbjct: 352 GYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVP 411
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
+ T+ LI G C +L + + P+ + + +++ +FC+++ A +
Sbjct: 412 NSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVL 471
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYT 249
EM+ R + D T + + G + + KLL EM K +++
Sbjct: 472 REMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQESFN 520
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 170/352 (48%), Gaps = 4/352 (1%)
Query: 19 DDAVSIFNRLL---RMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
D +F+ LL R + P + F+ + + +K + A Q+ G P + +
Sbjct: 148 DLPAKVFDALLYSYRECDSTPRV-FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESC 206
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
++ Q ++ A ++ + P+ T +M G C +G++ ++ +
Sbjct: 207 NAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMER 266
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
GFR V+Y LI G C+ G +AL+L + ++P+V + +IH FC+ + +
Sbjct: 267 LGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQE 326
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
A ++ EM A V P+ TYN LI G+ + A + ++MV I D T+N L+
Sbjct: 327 ASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIF 386
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
L K+ ++A + + K+ + P+ T+++L+ G C+ ++ +++ SM + G P
Sbjct: 387 GLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHP 446
Query: 316 NVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGR 367
N +++++++ C+ + D A +L EM ++I D+ T + +GL G+
Sbjct: 447 NEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGK 498
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 163/338 (48%), Gaps = 3/338 (0%)
Query: 15 IRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFT 74
RNA D F ++ P + N ++SL+ A+ ++ ISP+ +T
Sbjct: 184 FRNATDT---FMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYT 240
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
L ++++ YC ++ +L + + G+R +++ TL+ G C G + +AL+ + +
Sbjct: 241 LNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMG 300
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
G + + VT+ LI+G C+ + + A ++ +++ V P+ Y +I+ + +
Sbjct: 301 KSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHE 360
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
A+ Y +M+ + D+ TYNALI+G C ++ ++A + + E+ +N+ P++ TF+ L+
Sbjct: 361 MAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
N + M++ G P+ T+N L+ +C + + A + M +R I
Sbjct: 421 MGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIP 480
Query: 315 PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDT 352
+ + + NGL K LL EM+ K + ++
Sbjct: 481 LDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQES 518
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 150/311 (48%), Gaps = 2/311 (0%)
Query: 69 SPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQ 128
+P +F L + + + +A ++ G+ P + M L G+V AL+
Sbjct: 167 TPRVFD--SLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALR 224
Query: 129 FHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFC 188
F+ + + T ++++G C+ G+ ++L++ ++ + Y +I C
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC 284
Query: 189 KDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAY 248
+ L+S A L + M + P+V T+N LI+GFC +L+EA+K+ EM N+ P+
Sbjct: 285 EKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTV 344
Query: 249 TFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM 308
T+N L++ ++G+ + A M+ G++ DI+TYN+L+ G C ++ KA +
Sbjct: 345 TYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKEL 404
Query: 309 PQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRV 368
+ + PN ++S +I G C K D L M P+ T++ L+ C++
Sbjct: 405 DKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDF 464
Query: 369 SHAWELVDDVI 379
A +++ +++
Sbjct: 465 DGASQVLREMV 475
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 97/229 (42%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A+ + N + + P ++ FN ++ + A + ++ ++P+ T LIN
Sbjct: 292 ALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLIN 351
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
Y Q AF ++ G + D +T+ L+ GLC + + A QF + +
Sbjct: 352 GYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVP 411
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
+ T+ LI G C +L + + P+ + + +++ +FC+++ A +
Sbjct: 412 NSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVL 471
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYT 249
EM+ R + D T + + G + + KLL EM K +++
Sbjct: 472 REMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQESFN 520
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 181/373 (48%), Gaps = 10/373 (2%)
Query: 16 RNADDAVSIFNRLLRMSPT-------PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTG- 67
R D+A+ +F ++ R T I FN ++ L K+ A L ++
Sbjct: 343 RRVDEALEVFEKM-RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEER 401
Query: 68 ISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTAL 127
+P+ T LI+ YC ++ +A V++++ + +P+ +T T++ G+C + + A+
Sbjct: 402 CAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAV 461
Query: 128 QFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSF 187
F + +G + + VTY LI+ C + A+ ++ PD ++Y +I
Sbjct: 462 VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 188 CKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDA 247
C+ + DA + ++ D+ YN LI FC + ++ ++L +M + PD+
Sbjct: 522 CQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDS 581
Query: 248 YTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNS 307
T+N L+ GK + + + ++ M + G+ P + TY +++D YC V E+++A +F
Sbjct: 582 ITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Query: 308 MP-QRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
M + PN Y+I+IN K +AL+L EM K + P+ TY++L L +
Sbjct: 642 MGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKT 701
Query: 367 RVSHAWELVDDVI 379
+ +L+D+++
Sbjct: 702 QGETLLKLMDEMV 714
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 177/390 (45%), Gaps = 50/390 (12%)
Query: 34 TPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFS 93
PP FN +L+ L + L ++D I PD+ TL ILIN C ++ A
Sbjct: 294 APP---FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALE 350
Query: 94 VLAKILKRGYR--------PDTITFTTLMKGLCLNGQVQTALQFHDHV-VAQGFRLDQVT 144
V K+ RG R D+I F TL+ GLC G+++ A + + + + + VT
Sbjct: 351 VFEKM--RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVT 408
Query: 145 YRILINGLCKMGQTRAALQLMRQIQGQLVKPDV------------------------EM- 179
Y LI+G C+ G+ A +++ +++ +KP+V +M
Sbjct: 409 YNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDME 468
Query: 180 ----------YTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLK 229
Y +IH+ C V A Y +ML PD Y ALI G C V +
Sbjct: 469 KEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDH 528
Query: 230 EATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLM 289
+A ++++++ D +N+L+ + N ++ +L M K+G KPD ITYN+L+
Sbjct: 529 DAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLI 588
Query: 290 DGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNII 349
+ + + + M + G+ P V +Y +I+ C ++DEAL L +M + +
Sbjct: 589 SFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKV 648
Query: 350 -PDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
P+TV Y+ LI+ K G A L +++
Sbjct: 649 NPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 176/379 (46%), Gaps = 56/379 (14%)
Query: 15 IRNA--DDAVSIFNRLL-RMSPTPPIIEFNKILTSLV-------KMKHYPTAISLSHQLD 64
+RN DDA + + +L + S PP N+I +V ++ I+L +
Sbjct: 196 LRNGLVDDAFKVLDEMLQKESVFPP----NRITADIVLHEVWKGRLLTEEKIIALISRFS 251
Query: 65 FTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQ 124
G+SP+ LT I+ C A+ +A+ +L+ ++K + F L+ L N +
Sbjct: 252 SHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDIS 311
Query: 125 TALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIII 184
+ +D V+ ++D+V ++PDV I+I
Sbjct: 312 ---RMNDLVL----KMDEVK----------------------------IRPDVVTLGILI 336
Query: 185 HSFCKDKLVSDAYNLYSEMLARR------VLPDVFTYNALIYGFCIVSQLKEATKLLDEM 238
++ CK + V +A ++ +M +R + D +N LI G C V +LKEA +LL M
Sbjct: 337 NTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRM 396
Query: 239 -VTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSE 297
+ + P+A T+N L+D + G ++ AK V++ M + +KP+++T N+++ G C
Sbjct: 397 KLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHG 456
Query: 298 VNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSS 357
+N A F M + G+ NV +Y +I+ C V++A+ +M PD Y +
Sbjct: 457 LNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYA 516
Query: 358 LIDGLCKSGRVSHAWELVD 376
LI GLC+ R A +V+
Sbjct: 517 LISGLCQVRRDHDAIRVVE 535
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 146/316 (46%), Gaps = 1/316 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+ A + +R+ P ++ N I+ + + A+ ++ G+ ++ T L
Sbjct: 423 ETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTL 482
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ C+ + + A K+L+ G PD + L+ GLC + A++ + + GF
Sbjct: 483 IHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF 542
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
LD + Y +LI C T +++ ++ + KPD Y +I F K K
Sbjct: 543 SLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVER 602
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEM-VTKNIHPDAYTFNILVDAL 257
+ +M + P V TY A+I +C V +L EA KL +M + ++P+ +NIL++A
Sbjct: 603 MMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAF 662
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
K GN +A ++ M + V+P++ TYN+L ++ + + M ++ PN
Sbjct: 663 SKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQ 722
Query: 318 HSYSIMINGLCKTKKV 333
+ I++ L + ++
Sbjct: 723 ITMEILMERLSGSDEL 738
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 135/296 (45%), Gaps = 22/296 (7%)
Query: 14 SIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIF 73
S+ N + A+ + ++L +P + +++ L +++ AI + +L G S D+
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLL 547
Query: 74 TLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHV 133
+LI +C++ + +L + K G +PD+IT+ TL+ + ++ + + +
Sbjct: 548 AYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM 607
Query: 134 VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQ-GQLVKPDVEMYTIIIHSFCKDKL 192
G TY +I+ C +G+ AL+L + + V P+ +Y I+I++F K
Sbjct: 608 REDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGN 667
Query: 193 VSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNI 252
A +L EM + V P+V TYNAL +Q + KL+DEMV ++ P+ T I
Sbjct: 668 FGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEI 727
Query: 253 LVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAK--DIFN 306
L++ L +++ M GY + S KA D+F+
Sbjct: 728 LMERLSGSD-------------------ELVKLRKFMQGYSVASPTEKASPFDVFS 764
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 124/259 (47%), Gaps = 12/259 (4%)
Query: 127 LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS 186
L+ ++ + L V +LI +MG ++ + ++ + V +++
Sbjct: 137 LRLYEIAKEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVR--NVVVDV 194
Query: 187 FCKDKLVSDAYNLYSEMLARRVL--PDVFTYNALIYGFCIVSQLKEAT--KLLDEMVTKN 242
++ LV DA+ + EML + + P+ T + +++ L E L+ +
Sbjct: 195 LLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHG 254
Query: 243 IHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAK 302
+ P++ + +L K A +L+ +MK + +N+L+ ++++
Sbjct: 255 VSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMN 314
Query: 303 DIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM-----DCKNII-PDTVTYS 356
D+ M + I P+V + I+IN LCK+++VDEAL + +M D N+I D++ ++
Sbjct: 315 DLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFN 374
Query: 357 SLIDGLCKSGRVSHAWELV 375
+LIDGLCK GR+ A EL+
Sbjct: 375 TLIDGLCKVGRLKEAEELL 393
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 13/175 (7%)
Query: 206 RRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKN--IHPDAYTFNILVDALGKEGNV 263
R V+ DV N L+ +A K+LDEM+ K P+ T +I++ + K +
Sbjct: 188 RNVVVDVLLRNGLV---------DDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLL 238
Query: 264 KEAKTV--LAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYS 321
E K + ++ GV P+ + + C + N A DI + + + ++
Sbjct: 239 TEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFN 298
Query: 322 IMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
+++ L + + +L+ +MD I PD VT LI+ LCKS RV A E+ +
Sbjct: 299 ALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFE 353
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 147/294 (50%), Gaps = 15/294 (5%)
Query: 94 VLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTY-------- 145
VLAK GY FT L+K V + + V++ +++ + +
Sbjct: 106 VLAKHRSSGYPLTGEIFTYLIK-------VYAEAKLPEKVLSTFYKMLEFNFTPQPKHLN 158
Query: 146 RILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLA 205
RIL + G + A +L + + V P+ Y +++ +FC + +S AY L+ +ML
Sbjct: 159 RILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLE 218
Query: 206 RRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKE 265
R V+PDV +Y LI GFC Q+ A +LLD+M+ K PD ++ L+++L ++ ++E
Sbjct: 219 RDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLRE 278
Query: 266 AKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMIN 325
A +L M +G PD++ YN+++ G+C A+ + + M G +PN SY +I
Sbjct: 279 AYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIG 338
Query: 326 GLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
GLC DE L EM K P + L+ G C G+V A ++V+ V+
Sbjct: 339 GLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVM 392
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 140/285 (49%), Gaps = 1/285 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHY-PTAISLSHQLDFTGISPDIFTLTI 77
+ +S F ++L + TP N+IL LV + Y A L G+ P+ + +
Sbjct: 136 EKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNL 195
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
L+ +C ++ A+ + K+L+R PD ++ L++G C GQV A++ D ++ +G
Sbjct: 196 LMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKG 255
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
F D+++Y L+N LC+ Q R A +L+ +++ + PD+ Y +I FC++ DA
Sbjct: 256 FVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDAR 315
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
+ +ML+ P+ +Y LI G C E K L+EM++K P N LV
Sbjct: 316 KVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGF 375
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAK 302
G V+EA V+ V+MK G T+ ++ C E K K
Sbjct: 376 CSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIK 420
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 131/269 (48%)
Query: 84 NQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQV 143
++ + AF + G P+T ++ LM+ CLN + A Q ++ + D
Sbjct: 167 HRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVD 226
Query: 144 TYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEM 203
+Y+ILI G C+ GQ A++L+ + + PD YT +++S C+ + +AY L M
Sbjct: 227 SYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRM 286
Query: 204 LARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNV 263
+ PD+ YN +I GFC + +A K+LD+M++ P++ ++ L+ L +G
Sbjct: 287 KLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMF 346
Query: 264 KEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIM 323
E K L M+ +G P N L+ G+C +V +A D+ + + G + ++ ++
Sbjct: 347 DEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMV 406
Query: 324 INGLCKTKKVDEALNLLAEMDCKNIIPDT 352
I +C + ++ L + + I DT
Sbjct: 407 IPLICNEDESEKIKLFLEDAVKEEITGDT 435
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 180/373 (48%), Gaps = 10/373 (2%)
Query: 16 RNADDAVSIFNRLLRMSPT-------PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTG- 67
R D+A+ +F ++ R T I FN ++ L K+ A L ++
Sbjct: 343 RRVDEALEVFEQM-RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEER 401
Query: 68 ISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTAL 127
P+ T LI+ YC ++ +A V++++ + +P+ +T T++ G+C + + A+
Sbjct: 402 CVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAV 461
Query: 128 QFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSF 187
F + +G + + VTY LI+ C + A+ ++ PD ++Y +I
Sbjct: 462 VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 188 CKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDA 247
C+ + DA + ++ D+ YN LI FC + ++ ++L +M + PD+
Sbjct: 522 CQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDS 581
Query: 248 YTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNS 307
T+N L+ GK + + + ++ M + G+ P + TY +++D YC V E+++A +F
Sbjct: 582 ITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Query: 308 MP-QRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
M + PN Y+I+IN K +AL+L EM K + P+ TY++L L +
Sbjct: 642 MGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKT 701
Query: 367 RVSHAWELVDDVI 379
+ +L+D+++
Sbjct: 702 QGETLLKLMDEMV 714
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 192/426 (45%), Gaps = 64/426 (15%)
Query: 6 RLKNSLPPSIRNADDAVSIFNRLLR-MSP--TPPIIEFNKILTSLVKMKHYPTAISLSHQ 62
R +SL + R A+ A I + L++ +P PP FN +L+ L + L +
Sbjct: 264 RFISSLCKNAR-ANTAWDILSDLMKNKTPLEAPP---FNALLSCLGRNMDISRMNDLVLK 319
Query: 63 LDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYR--------PDTITFTTLM 114
+D I PD+ TL ILIN C ++ A V ++ RG R D+I F TL+
Sbjct: 320 MDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQM--RGKRTDDGNVIKADSIHFNTLI 377
Query: 115 KGLCLNGQVQTA------LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQI 168
GLC G+++ A ++ + V VTY LI+G C+ G+ A +++ ++
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCVPNA-----VTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 169 QGQLVKPDV------------------------EM-----------YTIIIHSFCKDKLV 193
+ +KP+V +M Y +IH+ C V
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
A Y +ML PD Y ALI G C V + +A ++++++ D +N+L
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
+ + N ++ +L M K+G KPD ITYN+L+ + + + + M + G+
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 314 APNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNII-PDTVTYSSLIDGLCKSGRVSHAW 372
P V +Y +I+ C ++DEAL L +M + + P+TV Y+ LI+ K G A
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQAL 672
Query: 373 ELVDDV 378
L +++
Sbjct: 673 SLKEEM 678
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 155/316 (49%), Gaps = 9/316 (2%)
Query: 70 PDIFTLTILINCYCNQAQITSA--FSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTAL 127
P+ T I+++ + +T +++++ G P+++ T + LC N + TA
Sbjct: 220 PNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAW 279
Query: 128 QFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSF 187
++ L+ + L++ L + L+ ++ ++PDV I+I++
Sbjct: 280 DILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTL 339
Query: 188 CKDKLVSDAYNLYSEMLARR------VLPDVFTYNALIYGFCIVSQLKEATKLLDEM-VT 240
CK + V +A ++ +M +R + D +N LI G C V +LKEA +LL M +
Sbjct: 340 CKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLE 399
Query: 241 KNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNK 300
+ P+A T+N L+D + G ++ AK V++ M + +KP+++T N+++ G C +N
Sbjct: 400 ERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNM 459
Query: 301 AKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLID 360
A F M + G+ NV +Y +I+ C V++A+ +M PD Y +LI
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 361 GLCKSGRVSHAWELVD 376
GLC+ R A +V+
Sbjct: 520 GLCQVRRDHDAIRVVE 535
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 145/316 (45%), Gaps = 1/316 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+ A + +R+ P ++ N I+ + + A+ ++ G+ ++ T L
Sbjct: 423 ETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTL 482
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ C+ + + A K+L+ G PD + L+ GLC + A++ + + GF
Sbjct: 483 IHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF 542
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
LD + Y +LI C +++ ++ + KPD Y +I F K K
Sbjct: 543 SLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVER 602
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEM-VTKNIHPDAYTFNILVDAL 257
+ +M + P V TY A+I +C V +L EA KL +M + ++P+ +NIL++A
Sbjct: 603 MMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAF 662
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
K GN +A ++ M + V+P++ TYN+L ++ + + M ++ PN
Sbjct: 663 SKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQ 722
Query: 318 HSYSIMINGLCKTKKV 333
+ I++ L + ++
Sbjct: 723 ITMEILMERLSGSDEL 738
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 135/296 (45%), Gaps = 22/296 (7%)
Query: 14 SIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIF 73
S+ N + A+ + ++L +P + +++ L +++ AI + +L G S D+
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLL 547
Query: 74 TLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHV 133
+LI +C++ + +L + K G +PD+IT+ TL+ + ++ + + +
Sbjct: 548 AYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM 607
Query: 134 VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQ-GQLVKPDVEMYTIIIHSFCKDKL 192
G TY +I+ C +G+ AL+L + + V P+ +Y I+I++F K
Sbjct: 608 REDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGN 667
Query: 193 VSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNI 252
A +L EM + V P+V TYNAL +Q + KL+DEMV ++ P+ T I
Sbjct: 668 FGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEI 727
Query: 253 LVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAK--DIFN 306
L++ L +++ M GY + S KA D+F+
Sbjct: 728 LMERLSGSD-------------------ELVKLRKFMQGYSVASPTEKASPFDVFS 764
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 125/259 (48%), Gaps = 12/259 (4%)
Query: 127 LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS 186
L+ ++ + L V ++LI +MG ++ + ++ + V +++
Sbjct: 137 LRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVR--NVVVDV 194
Query: 187 FCKDKLVSDAYNLYSEMLARRVL--PDVFTYNALIYGFCIVSQLKEAT--KLLDEMVTKN 242
++ LV DA+ + EML + + P+ T + +++ L E L+ +
Sbjct: 195 LLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHG 254
Query: 243 IHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAK 302
+ P++ + +L K A +L+ +MK + +N+L+ ++++
Sbjct: 255 VSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMN 314
Query: 303 DIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM-----DCKNII-PDTVTYS 356
D+ M + I P+V + I+IN LCK+++VDEAL + +M D N+I D++ ++
Sbjct: 315 DLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFN 374
Query: 357 SLIDGLCKSGRVSHAWELV 375
+LIDGLCK GR+ A EL+
Sbjct: 375 TLIDGLCKVGRLKEAEELL 393
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 13/175 (7%)
Query: 206 RRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKN--IHPDAYTFNILVDALGKEGNV 263
R V+ DV N L+ +A K+LDEM+ K P+ T +I++ + KE +
Sbjct: 188 RNVVVDVLLRNGLV---------DDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLL 238
Query: 264 KEAKTV--LAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYS 321
E K + ++ GV P+ + + C + N A DI + + + ++
Sbjct: 239 TEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFN 298
Query: 322 IMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
+++ L + + +L+ +MD I PD VT LI+ LCKS RV A E+ +
Sbjct: 299 ALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFE 353
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 180/373 (48%), Gaps = 10/373 (2%)
Query: 16 RNADDAVSIFNRLLRMSPT-------PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTG- 67
R D+A+ +F ++ R T I FN ++ L K+ A L ++
Sbjct: 343 RRVDEALEVFEQM-RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEER 401
Query: 68 ISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTAL 127
P+ T LI+ YC ++ +A V++++ + +P+ +T T++ G+C + + A+
Sbjct: 402 CVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAV 461
Query: 128 QFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSF 187
F + +G + + VTY LI+ C + A+ ++ PD ++Y +I
Sbjct: 462 VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 188 CKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDA 247
C+ + DA + ++ D+ YN LI FC + ++ ++L +M + PD+
Sbjct: 522 CQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDS 581
Query: 248 YTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNS 307
T+N L+ GK + + + ++ M + G+ P + TY +++D YC V E+++A +F
Sbjct: 582 ITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Query: 308 MP-QRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
M + PN Y+I+IN K +AL+L EM K + P+ TY++L L +
Sbjct: 642 MGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKT 701
Query: 367 RVSHAWELVDDVI 379
+ +L+D+++
Sbjct: 702 QGETLLKLMDEMV 714
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 192/426 (45%), Gaps = 64/426 (15%)
Query: 6 RLKNSLPPSIRNADDAVSIFNRLLR-MSP--TPPIIEFNKILTSLVKMKHYPTAISLSHQ 62
R +SL + R A+ A I + L++ +P PP FN +L+ L + L +
Sbjct: 264 RFISSLCKNAR-ANTAWDILSDLMKNKTPLEAPP---FNALLSCLGRNMDISRMNDLVLK 319
Query: 63 LDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYR--------PDTITFTTLM 114
+D I PD+ TL ILIN C ++ A V ++ RG R D+I F TL+
Sbjct: 320 MDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQM--RGKRTDDGNVIKADSIHFNTLI 377
Query: 115 KGLCLNGQVQTA------LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQI 168
GLC G+++ A ++ + V VTY LI+G C+ G+ A +++ ++
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCVPNA-----VTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 169 QGQLVKPDV------------------------EM-----------YTIIIHSFCKDKLV 193
+ +KP+V +M Y +IH+ C V
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
A Y +ML PD Y ALI G C V + +A ++++++ D +N+L
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
+ + N ++ +L M K+G KPD ITYN+L+ + + + + M + G+
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 314 APNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNII-PDTVTYSSLIDGLCKSGRVSHAW 372
P V +Y +I+ C ++DEAL L +M + + P+TV Y+ LI+ K G A
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQAL 672
Query: 373 ELVDDV 378
L +++
Sbjct: 673 SLKEEM 678
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 155/316 (49%), Gaps = 9/316 (2%)
Query: 70 PDIFTLTILINCYCNQAQITSA--FSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTAL 127
P+ T I+++ + +T +++++ G P+++ T + LC N + TA
Sbjct: 220 PNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAW 279
Query: 128 QFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSF 187
++ L+ + L++ L + L+ ++ ++PDV I+I++
Sbjct: 280 DILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTL 339
Query: 188 CKDKLVSDAYNLYSEMLARR------VLPDVFTYNALIYGFCIVSQLKEATKLLDEM-VT 240
CK + V +A ++ +M +R + D +N LI G C V +LKEA +LL M +
Sbjct: 340 CKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLE 399
Query: 241 KNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNK 300
+ P+A T+N L+D + G ++ AK V++ M + +KP+++T N+++ G C +N
Sbjct: 400 ERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNM 459
Query: 301 AKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLID 360
A F M + G+ NV +Y +I+ C V++A+ +M PD Y +LI
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 361 GLCKSGRVSHAWELVD 376
GLC+ R A +V+
Sbjct: 520 GLCQVRRDHDAIRVVE 535
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 111/227 (48%), Gaps = 1/227 (0%)
Query: 14 SIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIF 73
S+ N + A+ + ++L +P + +++ L +++ AI + +L G S D+
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLL 547
Query: 74 TLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHV 133
+LI +C++ + +L + K G +PD+IT+ TL+ + ++ + + +
Sbjct: 548 AYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM 607
Query: 134 VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQ-GQLVKPDVEMYTIIIHSFCKDKL 192
G TY +I+ C +G+ AL+L + + V P+ +Y I+I++F K
Sbjct: 608 REDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGN 667
Query: 193 VSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMV 239
A +L EM + V P+V TYNAL +Q + KL+DEMV
Sbjct: 668 FGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMV 714
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 125/259 (48%), Gaps = 12/259 (4%)
Query: 127 LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS 186
L+ ++ + L V ++LI +MG ++ + ++ + V +++
Sbjct: 137 LRLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVR--NVVVDV 194
Query: 187 FCKDKLVSDAYNLYSEMLARRVL--PDVFTYNALIYGFCIVSQLKEAT--KLLDEMVTKN 242
++ LV DA+ + EML + + P+ T + +++ L E L+ +
Sbjct: 195 LLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHG 254
Query: 243 IHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAK 302
+ P++ + +L K A +L+ +MK + +N+L+ ++++
Sbjct: 255 VSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMN 314
Query: 303 DIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM-----DCKNII-PDTVTYS 356
D+ M + I P+V + I+IN LCK+++VDEAL + +M D N+I D++ ++
Sbjct: 315 DLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFN 374
Query: 357 SLIDGLCKSGRVSHAWELV 375
+LIDGLCK GR+ A EL+
Sbjct: 375 TLIDGLCKVGRLKEAEELL 393
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 13/175 (7%)
Query: 206 RRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKN--IHPDAYTFNILVDALGKEGNV 263
R V+ DV N L+ +A K+LDEM+ K P+ T +I++ + KE +
Sbjct: 188 RNVVVDVLLRNGLV---------DDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLL 238
Query: 264 KEAKTV--LAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYS 321
E K + ++ GV P+ + + C + N A DI + + + ++
Sbjct: 239 TEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFN 298
Query: 322 IMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
+++ L + + +L+ +MD I PD VT LI+ LCKS RV A E+ +
Sbjct: 299 ALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFE 353
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 163/344 (47%), Gaps = 7/344 (2%)
Query: 34 TPPIIE---FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITS 90
P +IE F ++ A+ + ++ G+ PD + L++ C +
Sbjct: 161 NPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKE 220
Query: 91 AFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILIN 150
A V ++ + P+ FT+L+ G C G++ A + + G D V + L++
Sbjct: 221 ASKVFED-MREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLS 279
Query: 151 GLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCK-DKLVSDAYNLYSEMLARRVL 209
G G+ A LM ++ + +P+V YT++I + C+ +K + +A ++ EM
Sbjct: 280 GYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCE 339
Query: 210 PDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTV 269
D+ TY ALI GFC + + +LD+M K + P T+ ++ A K+ +E +
Sbjct: 340 ADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLEL 399
Query: 270 LAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCK 329
+ M ++G PD++ YN ++ C + EV +A ++N M G++P V ++ IMING
Sbjct: 400 IEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTS 459
Query: 330 TKKVDEALNLLAEMDCKNII--PDTVTYSSLIDGLCKSGRVSHA 371
+ EA N EM + I P T SL++ L + ++ A
Sbjct: 460 QGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMA 503
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 131/233 (56%), Gaps = 4/233 (1%)
Query: 147 ILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLAR 206
++++ + + G ++ MR+ +L++P E++ +++ F +V A + EM
Sbjct: 139 MILSKMRQFGAVWGLIEEMRKTNPELIEP--ELFVVLMRRFASANMVKKAVEVLDEMPKY 196
Query: 207 RVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEA 266
+ PD + + L+ C +KEA+K+ ++M K P+ F L+ +EG + EA
Sbjct: 197 GLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEA 255
Query: 267 KTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMING 326
K VL M + G++PDI+ + +L+ GY ++ A D+ N M +RG PNV+ Y+++I
Sbjct: 256 KEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQA 315
Query: 327 LCKT-KKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
LC+T K++DEA+ + EM+ D VTY++LI G CK G + + ++DD+
Sbjct: 316 LCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDM 368
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 142/282 (50%), Gaps = 5/282 (1%)
Query: 101 RGYRPDTIT---FTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQ 157
R P+ I F LM+ V+ A++ D + G D+ + L++ LCK G
Sbjct: 158 RKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGS 217
Query: 158 TRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNA 217
+ A ++ ++ + P++ +T +++ +C++ + +A + +M + PD+ +
Sbjct: 218 VKEASKVFEDMREKF-PPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTN 276
Query: 218 LIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK-EGNVKEAKTVLAVMMKQ 276
L+ G+ ++ +A L+++M + P+ + +L+ AL + E + EA V M +
Sbjct: 277 LLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERY 336
Query: 277 GVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEA 336
G + DI+TY +L+ G+C ++K + + M ++G+ P+ +Y ++ K ++ +E
Sbjct: 337 GCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEEC 396
Query: 337 LNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
L L+ +M + PD + Y+ +I CK G V A L +++
Sbjct: 397 LELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEM 438
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 160/392 (40%), Gaps = 49/392 (12%)
Query: 4 FLRLKNSLPPSIR-------------NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKM 50
F ++ PP++R +A + ++ P I+ F +L+
Sbjct: 225 FEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHA 284
Query: 51 KHYPTAISLSHQLDFTGISPDIFTLTILINCYCN-QAQITSAFSVLAKILKRGYRPDTIT 109
A L + + G P++ T+LI C + ++ A V ++ + G D +T
Sbjct: 285 GKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVT 344
Query: 110 FTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQ 169
+T L+ G C G + D + +G QVTY ++ K Q L+L+ +++
Sbjct: 345 YTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMK 404
Query: 170 GQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLK 229
+ PD+ +Y ++I CK V +A L++EM A + P V T+ +I GF L
Sbjct: 405 RRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLI 464
Query: 230 EATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLM 289
EA EMV++ I P T SL+
Sbjct: 465 EACNHFKEMVSRGIFS---------------------------------APQYGTLKSLL 491
Query: 290 DGYCLVSEVNKAKDIFNSMPQR--GIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKN 347
+ ++ AKD+++ + + NV +++I I+ L V EA + +M +
Sbjct: 492 NNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMD 551
Query: 348 IIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
++P TY+ L+ GL K + A E+ + V+
Sbjct: 552 LMPQPNTYAKLMKGLNKLYNRTIAAEITEKVV 583
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 161/322 (50%)
Query: 57 ISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKG 116
+ L +++ + D+ + +I + + A +L G T T +++
Sbjct: 254 LRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISA 313
Query: 117 LCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPD 176
L +G+ A + + G + Y L+ G K G + A ++ +++ + V PD
Sbjct: 314 LADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPD 373
Query: 177 VEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLD 236
Y+++I ++ A + EM A V P+ F ++ L+ GF + ++ ++L
Sbjct: 374 EHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLK 433
Query: 237 EMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVS 296
EM + + PD +N+++D GK + A T M+ +G++PD +T+N+L+D +C
Sbjct: 434 EMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHG 493
Query: 297 EVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYS 356
A+++F +M +RG P +Y+IMIN ++ D+ LL +M + I+P+ VT++
Sbjct: 494 RHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHT 553
Query: 357 SLIDGLCKSGRVSHAWELVDDV 378
+L+D KSGR + A E ++++
Sbjct: 554 TLVDVYGKSGRFNDAIECLEEM 575
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 161/345 (46%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A ++F L + P +N +L VK A S+ +++ G+SPD T ++LI
Sbjct: 322 EAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLI 381
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ Y N + SA VL ++ +P++ F+ L+ G G+ Q Q + + G +
Sbjct: 382 DAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVK 441
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
D+ Y ++I+ K A+ ++ + ++PD + +I CK A +
Sbjct: 442 PDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEM 501
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+ M R LP TYN +I + + + +LL +M ++ I P+ T LVD GK
Sbjct: 502 FEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGK 561
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
G +A L M G+KP YN+L++ Y +A + F M G+ P++ +
Sbjct: 562 SGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLA 621
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCK 364
+ +IN + ++ EA +L M + PD VTY++L+ L +
Sbjct: 622 LNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIR 666
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 158/333 (47%)
Query: 43 ILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRG 102
I+++L A +L +L +GI P L+ Y + A S+++++ KRG
Sbjct: 310 IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG 369
Query: 103 YRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAAL 162
PD T++ L+ G+ ++A + A + + + L+ G G+ +
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 163 QLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGF 222
Q++++++ VKPD + Y ++I +F K + A + ML+ + PD T+N LI
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 489
Query: 223 CIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDI 282
C + A ++ + M + P A T+NI++++ G + + K +L M QG+ P++
Sbjct: 490 CKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV 549
Query: 283 ITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAE 342
+T+ +L+D Y N A + M G+ P+ Y+ +IN + ++A+N
Sbjct: 550 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV 609
Query: 343 MDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
M + P + +SLI+ + R + A+ ++
Sbjct: 610 MTSDGLKPSLLALNSLINAFGEDRRDAEAFAVL 642
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 133/306 (43%), Gaps = 7/306 (2%)
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
+ILI+ ++ AF +L + +T+ L+ N ++ AL +
Sbjct: 171 SILIHALGRSEKLYEAF-----LLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQ 225
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAA--LQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLV 193
G++ D V Y ++I L + + + L+L ++I+ ++ DV++ II F K
Sbjct: 226 DGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDP 285
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
S A L A + T ++I + EA L +E+ I P +N L
Sbjct: 286 SKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNAL 345
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
+ K G +K+A+++++ M K+GV PD TY+ L+D Y A+ + M +
Sbjct: 346 LKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDV 405
Query: 314 APNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWE 373
PN +S ++ G + + +L EM + PD Y+ +ID K + HA
Sbjct: 406 QPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMT 465
Query: 374 LVDDVI 379
D ++
Sbjct: 466 TFDRML 471
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 110/239 (46%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A++ F+R+L P + +N ++ K + A + ++ G P T I+
Sbjct: 461 DHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIM 520
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
IN Y +Q + +L K+ +G P+ +T TTL+ +G+ A++ + + + G
Sbjct: 521 INSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGL 580
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ Y LIN + G + A+ R + +KP + +I++F +D+ ++A+
Sbjct: 581 KPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFA 640
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
+ M V PDV TY L+ V + ++ + +EM+ PD ++L AL
Sbjct: 641 VLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSAL 699
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 64/140 (45%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+DA+ + + P +N ++ + + A++ + G+ P + L L
Sbjct: 566 NDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSL 625
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
IN + + AF+VL + + G +PD +T+TTLMK L + Q ++ ++ G
Sbjct: 626 INAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGC 685
Query: 139 RLDQVTYRILINGLCKMGQT 158
+ D+ +L + L M QT
Sbjct: 686 KPDRKARSMLRSALRYMKQT 705
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 154/332 (46%), Gaps = 26/332 (7%)
Query: 2 SSFLRLKNSLPPSIR--------NADDAVS----IFNRLLRMSPTPPIIEFNKILTSLVK 49
F+RL+ LP S+ D +S + +R+ ++ P + K++ + +
Sbjct: 553 ERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCR 612
Query: 50 MKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTIT 109
+ + A L I PD+FT TI+IN YC + A+++ + +R +PD +T
Sbjct: 613 VNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVT 672
Query: 110 FTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQ 169
++ L+ L + A D V Y I+IN C + + L + ++
Sbjct: 673 YSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMK 725
Query: 170 GQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLK 229
+ + PDV YT+++ + NL EM A V PDVF Y LI C + L
Sbjct: 726 RREIVPDVVTYTVLLKN-------KPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLG 778
Query: 230 EATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLM 289
EA ++ D+M+ + PDA + L+ K G +KEAK + M++ GVKPD++ Y +L+
Sbjct: 779 EAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALI 838
Query: 290 DGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYS 321
G C V KA + M ++GI P S S
Sbjct: 839 AGCCRNGFVLKAVKLVKEMLEKGIKPTKASLS 870
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 162/336 (48%), Gaps = 17/336 (5%)
Query: 25 FNRLLRMS-PTPPIIEFNKILTSLVKMKHY-PTAISLSHQLDFTGISPDIFTLTILINCY 82
F R +R+ P P + F + TSL K Y A L ++ G+ P+ LI +
Sbjct: 552 FERFIRLEFPLPKSVYFT-LFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAW 610
Query: 83 CNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQ 142
C + A ++ + PD T+T ++ C + + A + + + + D
Sbjct: 611 CRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDV 670
Query: 143 VTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSE 202
VTY +L+N + L + R+++ V PDV YTI+I+ +C + Y L+ +
Sbjct: 671 VTYSVLLN-------SDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKD 723
Query: 203 MLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGN 262
M R ++PDV TY L+ + K L EM ++ PD + + +L+D K G+
Sbjct: 724 MKRREIVPDVVTYTVLL-------KNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGD 776
Query: 263 VKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSI 322
+ EAK + M++ GV PD Y +L+ C + + +AK IF+ M + G+ P+V Y+
Sbjct: 777 LGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTA 836
Query: 323 MINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSL 358
+I G C+ V +A+ L+ EM K I P + S++
Sbjct: 837 LIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 152/310 (49%), Gaps = 14/310 (4%)
Query: 70 PDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQF 129
P T+ + + I+ A +L ++ K G P+ + L+ C V+ A +F
Sbjct: 563 PKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREF 622
Query: 130 HDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCK 189
+ +V + D TY I+IN C++ + + A L ++ + VKPDV Y+++++S
Sbjct: 623 FEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS--- 679
Query: 190 DKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYT 249
++ EM A V+PDV Y +I +C ++ LK+ L +M + I PD T
Sbjct: 680 ----DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVT 735
Query: 250 FNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMP 309
+ +L+ + +E K VKPD+ Y L+D C + ++ +AK IF+ M
Sbjct: 736 YTVLLKNKPERNLSREMKAF-------DVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMI 788
Query: 310 QRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVS 369
+ G+ P+ Y+ +I CK + EA + M + PD V Y++LI G C++G V
Sbjct: 789 ESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVL 848
Query: 370 HAWELVDDVI 379
A +LV +++
Sbjct: 849 KAVKLVKEML 858
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 166/371 (44%), Gaps = 18/371 (4%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N AV +FN++L+ + + IL +M ++ A L + T IS D
Sbjct: 341 NIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYN 400
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
+ + ++ A + ++ +G PD I +TTL+ G CL G+ A +
Sbjct: 401 VAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGT 460
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G D V Y +L GL G + A + ++ ++ + VKP + ++I + A
Sbjct: 461 GKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKA 520
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIH-----PDAYTFN 251
Y + + D +++ GFC A LD + I P + F
Sbjct: 521 EAFYESLEHKSRENDA----SMVKGFC-------AAGCLDHAFERFIRLEFPLPKSVYFT 569
Query: 252 ILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQR 311
+ ++ + +A+ +L M K GV+P+ Y L+ +C V+ V KA++ F + +
Sbjct: 570 LFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTK 629
Query: 312 GIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLI--DGLCKSGRVS 369
I P++ +Y+IMIN C+ + +A L +M +++ PD VTYS L+ D R
Sbjct: 630 KIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREM 689
Query: 370 HAWELVDDVIF 380
A++++ DV++
Sbjct: 690 EAFDVIPDVVY 700
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 165/358 (46%), Gaps = 5/358 (1%)
Query: 19 DDAVSIFNR-LLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTI 77
D+A+ IF R + P I N +++ ++ + +++ G+ D T +
Sbjct: 163 DEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVL 222
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
++ +L+++L R + + ++GLCLN A +
Sbjct: 223 VVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDAN 282
Query: 138 FRLDQ----VTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLV 193
+D+ + YR ++ GLC + A ++ ++ + PDV +Y+ II K+ +
Sbjct: 283 ILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNI 342
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
A +++++ML +R + ++++ +C + EA L E NI D +N+
Sbjct: 343 PKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVA 402
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
DALGK G V+EA + M +G+ PD+I Y +L+ G CL + + A D+ M G
Sbjct: 403 FDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGK 462
Query: 314 APNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
P++ Y+++ GL EA L M+ + + P VT++ +I+GL +G + A
Sbjct: 463 TPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKA 520
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 137/295 (46%), Gaps = 8/295 (2%)
Query: 83 CNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQ 142
C + +I A SV+ + K G PD ++ +++G N + A+ + ++ + R++
Sbjct: 302 CYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINC 361
Query: 143 VTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSE 202
V ++ C+MG A L ++ + + D Y + + K V +A L+ E
Sbjct: 362 VIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFRE 421
Query: 203 MLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGN 262
M + + PDV Y LI G C+ + +A L+ EM PD +N+L L G
Sbjct: 422 MTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGL 481
Query: 263 VKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSI 322
+EA L +M +GVKP +T+N +++G E++KA+ + S+ + +
Sbjct: 482 AQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDAS---- 537
Query: 323 MINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLC-KSGRVSHAWELVD 376
M+ G C +D A ++ +P +V Y +L LC + +S A +L+D
Sbjct: 538 MVKGFCAAGCLDHAFERFIRLEFP--LPKSV-YFTLFTSLCAEKDYISKAQDLLD 589
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 137/304 (45%), Gaps = 39/304 (12%)
Query: 91 AFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILIN 150
A S L +I P + T+++ +C G + F +V +G D+ +++
Sbjct: 74 ALSFLKRIEGNVTLPSVQAYATVIRIVCGWGLDKKLDTFLFELVRRG---DEGRGFSVMD 130
Query: 151 GLCKMGQTRAALQLMRQIQGQLVKP--DVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRV 208
L +G+ +L L+ ++ LVK +++M+ I F + AY YS L R
Sbjct: 131 LLKAIGEMEQSLVLLIRVSTALVKAYANLDMFDEAIDIFFR------AY--YS--LGR-- 178
Query: 209 LPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKT 268
PD+ N LI + E+ + DA+T+ ++V AL + + +E +
Sbjct: 179 APDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEK 238
Query: 269 VLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDI--FNSMPQR-----------GIAP 315
+L+ ++ + + Y + ++G CL N+ DI F P R GIA
Sbjct: 239 LLSRLLISETRNPCVFYLNFIEGLCL----NQMTDIAYFLLQPLRDANILVDKSDLGIA- 293
Query: 316 NVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
Y ++ GLC ++++A +++ +M+ I PD YS++I+G K+ + A ++
Sbjct: 294 ----YRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVF 349
Query: 376 DDVI 379
+ ++
Sbjct: 350 NKML 353
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 161/319 (50%), Gaps = 10/319 (3%)
Query: 65 FTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQ 124
+ +SP + L+ L+ ++ A SV + R +P + T+ +++ L GQ +
Sbjct: 157 YVSVSPAV--LSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHE 214
Query: 125 TALQFHDHVVAQGFRL-DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTII 183
+ + + +G D +TY LI+ K+G+ +A++L +++ ++P ++YT +
Sbjct: 215 KVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTL 274
Query: 184 IHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNI 243
+ + K V A +L+ EM P V+TY LI G ++ EA +M+ +
Sbjct: 275 LGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGL 334
Query: 244 HPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYN----SLMDGYCLVSEVN 299
PD N L++ LGK G V+E V + M P +++YN +L + VSEV+
Sbjct: 335 TPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVS 394
Query: 300 KAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLI 359
F+ M ++P+ +YSI+I+G CKT +V++AL LL EMD K P Y SLI
Sbjct: 395 ---SWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLI 451
Query: 360 DGLCKSGRVSHAWELVDDV 378
+ L K+ R A EL ++
Sbjct: 452 NALGKAKRYEAANELFKEL 470
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 168/380 (44%), Gaps = 36/380 (9%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P I ++ +++S K+ +AI L ++ + P T L+ Y ++ A +
Sbjct: 231 PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290
Query: 95 LAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCK 154
++ + G P T+T L+KGL G+V A F+ ++ G D V L+N L K
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350
Query: 155 MGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKL-VSDAYNLYSEMLARRVLPDVF 213
+G+ + ++ P V Y +I + + K VS+ + + +M A V P F
Sbjct: 351 VGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEF 410
Query: 214 TYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE------------- 260
TY+ LI G+C +++++A LL+EM K P + L++ALGK
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKEL 470
Query: 261 ----------------------GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEV 298
G + EA + M QG PD+ YN+LM G +
Sbjct: 471 KENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMI 530
Query: 299 NKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSL 358
N+A + M + G +++S++I++NG +T A+ + + I PD VTY++L
Sbjct: 531 NEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTL 590
Query: 359 IDGLCKSGRVSHAWELVDDV 378
+ +G A ++ ++
Sbjct: 591 LGCFAHAGMFEEAARMMREM 610
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 164/361 (45%), Gaps = 7/361 (1%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+ A+ +F + R +P + + +++ L K A + G++PD+ L L
Sbjct: 285 EKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNL 344
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLN-GQVQTALQFHDHVVAQG 137
+N ++ +V +++ P +++ T++K L + V + D + A
Sbjct: 345 MNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADS 404
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
+ TY ILI+G CK + AL L+ ++ + P Y +I++ K K A
Sbjct: 405 VSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAAN 464
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
L+ E+ Y +I F +L EA L +EM + PD Y +N L+ +
Sbjct: 465 ELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGM 524
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
K G + EA ++L M + G + DI ++N +++G+ +A ++F ++ GI P+
Sbjct: 525 VKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDG 584
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDD 377
+Y+ ++ +EA ++ EM K D +TYSS++D + G V H DD
Sbjct: 585 VTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV---GNVDHE---KDD 638
Query: 378 V 378
V
Sbjct: 639 V 639
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 6/208 (2%)
Query: 176 DVEMYTIIIHSFCKDKLVSDAYNLYSEMLAR---RVLPDVFTYNALIYGFCIVSQLKEAT 232
D Y +I + +L + Y E++ V P V + L+ + +A
Sbjct: 125 DCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLS--ELVKALGRAKMVSKAL 182
Query: 233 KLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQG-VKPDIITYNSLMDG 291
+ + + P + T+N ++ L +EG ++ V M +G PD ITY++L+
Sbjct: 183 SVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISS 242
Query: 292 YCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPD 351
Y + + A +F+ M + P Y+ ++ K KV++AL+L EM P
Sbjct: 243 YEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPT 302
Query: 352 TVTYSSLIDGLCKSGRVSHAWELVDDVI 379
TY+ LI GL K+GRV A+ D++
Sbjct: 303 VYTYTELIKGLGKAGRVDEAYGFYKDML 330
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 154/336 (45%), Gaps = 36/336 (10%)
Query: 67 GISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA 126
GI P+ +T IL N +CN + L K+ + G+ PD +T+ TL+ C G+++ A
Sbjct: 231 GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEA 290
Query: 127 LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS 186
+ + + D VTY LI GLCK G+ R A Q ++ + +KPD Y +I++
Sbjct: 291 FYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYA 350
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFC----------------------- 223
+CK+ ++ + L EML V+PD FT ++ GF
Sbjct: 351 YCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIP 410
Query: 224 -------IVSQLKE-----ATKLLDEMVTKNIHP-DAYTFNILVDALGKEGNVKEAKTVL 270
IVS +E A LLD ++ + H T+N L+++L + ++EA +
Sbjct: 411 FEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLK 470
Query: 271 AVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKT 330
+ Q D TY +L+ C + +A+ + M + P+ ++ G CK
Sbjct: 471 GKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKE 530
Query: 331 KKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
D+A LL+ + I D +Y+SL+ +C++G
Sbjct: 531 LDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETG 566
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 144/289 (49%), Gaps = 4/289 (1%)
Query: 92 FSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILING 151
+SV+ ++ G P+T TF L C + + F + + +GF D VTY L++
Sbjct: 224 YSVMCRV---GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSS 280
Query: 152 LCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPD 211
C+ G+ + A L + + + V PD+ YT +I CKD V +A+ + M+ R + PD
Sbjct: 281 YCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPD 340
Query: 212 VFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLA 271
+YN LIY +C ++++ KLL EM+ ++ PD +T ++V+ +EG + A +
Sbjct: 341 CMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVV 400
Query: 272 VMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNS-MPQRGIAPNVHSYSIMINGLCKT 330
+ + V + L+ C + AK + + + + G +Y+ +I L +
Sbjct: 401 ELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRC 460
Query: 331 KKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
++EAL L ++ +N + D TY +LI LC+ GR A L+ ++
Sbjct: 461 DAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMF 509
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 137/292 (46%), Gaps = 18/292 (6%)
Query: 102 GYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV--------AQGFRL----------DQV 143
G RP+ + L+ L + + A+QF ++ FR+ D V
Sbjct: 108 GKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDPV 167
Query: 144 TYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEM 203
+ +L+ G K+G ++ R++ V +++ K L+ D + +YS M
Sbjct: 168 VFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVM 227
Query: 204 LARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNV 263
+ P+ +T+N L FC S +E L++M + PD T+N LV + + G +
Sbjct: 228 CRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRL 287
Query: 264 KEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIM 323
KEA + +M ++ V PD++TY SL+ G C V +A F+ M RGI P+ SY+ +
Sbjct: 288 KEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTL 347
Query: 324 INGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
I CK + ++ LL EM +++PD T +++G + GR+ A V
Sbjct: 348 IYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFV 399
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 109/275 (39%), Gaps = 37/275 (13%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A F+R++ P + +N ++ + K + L H++ + PD FT +++
Sbjct: 324 EAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIV 383
Query: 80 NCYCNQAQITSAFSVLAK------------------------------------ILKRGY 103
+ + ++ SA + + + I + G+
Sbjct: 384 EGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGH 443
Query: 104 RPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQ 163
T+ L++ L ++ AL + Q LD TYR LI LC++G+ R A
Sbjct: 444 EAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAES 503
Query: 164 LMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFC 223
LM ++ VKPD + +++ +CK+ A L S + D +YN+L+ C
Sbjct: 504 LMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVC 563
Query: 224 IVS-QLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
K+A +L + M P+ T L+ L
Sbjct: 564 ETGCGYKKALELQERMQRLGFVPNRLTCKYLIQVL 598
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 188/423 (44%), Gaps = 45/423 (10%)
Query: 1 MSSFLRLKNSLPPSIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLS 60
++++ RL N L R D +F+ R P ++ F ++ +++ A +
Sbjct: 162 LTNYNRLMNQLCTIYRVIDAHKLVFDMRNR-GHLPDVVTFTTLIGGYCEIRELEVAHKVF 220
Query: 61 HQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTIT------FTTLM 114
++ GI P+ TL++LI + + + ++ ++ + + +T T F L+
Sbjct: 221 DEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEY-MKNETDTSMKAAAFANLV 279
Query: 115 KGLCLNGQVQTALQF---------------HDHVV--------------------AQGFR 139
+C G + + H++ ++G +
Sbjct: 280 DSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLK 339
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
+ +Y +I+GLCK G A QL+ + P Y +++ S CK+ A N+
Sbjct: 340 PRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNV 399
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
ML + YN + G C++ E +L M+ + PD YT N +++ L K
Sbjct: 400 LELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCK 459
Query: 260 EGNVKEAKTVLAVMM-KQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNS-MPQRGIAPNV 317
G V +A VL MM + PD +T N++M G +A D+ N MP+ I P V
Sbjct: 460 MGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGV 519
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDD 377
+Y+ +I GL K K DEA+++ +++ ++ D+ TY+ +IDGLC + +V A + DD
Sbjct: 520 VAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDD 579
Query: 378 VIF 380
VI+
Sbjct: 580 VIW 582
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 166/351 (47%), Gaps = 41/351 (11%)
Query: 70 PDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQF 129
P + L+N C ++ A ++ + RG+ PD +TFTTL+ G C +++ A +
Sbjct: 160 PSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKV 219
Query: 130 HDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLV-KPDVEM----YTIII 184
D + G R + +T +LI G KM +LM+++ + + D M + ++
Sbjct: 220 FDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLV 279
Query: 185 HSFCKDKLVSDAYNL---------------YSEML-----------ARRVL--------- 209
S C++ +D + + Y M+ A R++
Sbjct: 280 DSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLK 339
Query: 210 PDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTV 269
P +YNA+I+G C A +LL+E P YT+ +L+++L KE + +A+ V
Sbjct: 340 PRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNV 399
Query: 270 LAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCK 329
L +M+++ YN + G C++ + ++ SM Q P+ ++ + +INGLCK
Sbjct: 400 LELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCK 459
Query: 330 TKKVDEALNLLAE-MDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+VD+A+ +L + M K PD VT ++++ GL GR A ++++ V+
Sbjct: 460 MGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVM 510
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 169/379 (44%), Gaps = 43/379 (11%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
F ++ S+ + ++ ++ + F +I+ C + A ++ +
Sbjct: 275 FANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMK 334
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCK---MG 156
+G +P ++ ++ GLC +G A Q + F + TY++L+ LCK G
Sbjct: 335 SKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTG 394
Query: 157 QTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYN 216
+ R L+LM + +G +Y I + C ++ N+ ML PD +T N
Sbjct: 395 KARNVLELMLRKEGA---DRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLN 451
Query: 217 ALIYGFCIVSQLKEATKLLDEMVT-KNIHPDAYTFNILVDALGKEGNVKEAKTVL-AVMM 274
+I G C + ++ +A K+LD+M+T K PDA T N ++ L +G +EA VL VM
Sbjct: 452 TVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMP 511
Query: 275 KQGVKPDIITYNS-----------------------------------LMDGYCLVSEVN 299
+ +KP ++ YN+ ++DG C+ ++V+
Sbjct: 512 ENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVD 571
Query: 300 KAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLI 359
AK ++ + + Y+ + GLC++ + +A + L ++ IP+ V Y+++I
Sbjct: 572 MAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVI 631
Query: 360 DGLCKSGRVSHAWELVDDV 378
+SG A+++++++
Sbjct: 632 AECSRSGLKREAYQILEEM 650
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 146/298 (48%), Gaps = 13/298 (4%)
Query: 90 SAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILI 149
A +L + RGYRPD++ ++++ LC G+ A + +A GF D+ T ++I
Sbjct: 73 EALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVII 132
Query: 150 NGLCKMGQTRAALQLMRQIQG--QLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARR 207
L + L ++ ++ G + P + Y +++ C V DA+ L +M R
Sbjct: 133 ARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRG 192
Query: 208 VLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAK 267
LPDV T+ LI G+C + +L+ A K+ DEM I P++ T ++L+ K +V+ +
Sbjct: 193 HLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGR 252
Query: 268 TVLAVM---MKQGVKPDI--ITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH---S 319
++ + MK + + +L+D C N DIF + +V+ +
Sbjct: 253 KLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFN---DIFEIAENMSLCESVNVEFA 309
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDD 377
Y MI+ LC+ ++ A ++ M K + P +Y+++I GLCK G A++L+++
Sbjct: 310 YGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEE 367
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 168/390 (43%), Gaps = 23/390 (5%)
Query: 15 IRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFT 74
+ DDA+ +R R S T +I + ++ A+ + L G PD
Sbjct: 35 VEGEDDAIEAEDR--RRSVTDRAYWRRRIHSICAVRRNPDEALRILDGLCLRGYRPDSLN 92
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
L+ +I+ C+ + A L G+ PD T ++ L + + L ++
Sbjct: 93 LSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLI 152
Query: 135 AQGFRLDQV----TYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKD 190
GF+ + V Y L+N LC + + A +L+ ++ + PDV +T +I +C+
Sbjct: 153 --GFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEI 210
Query: 191 KLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMV-----TKNIHP 245
+ + A+ ++ EM + P+ T + LI GF + ++ KL+ E+ +
Sbjct: 211 RELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSM 270
Query: 246 DAYTFNILVDALGKEGNVKEAKTVLAVM-MKQGVKPDIITYNSLMDGYCLVSEVNKAKDI 304
A F LVD++ +EG + + M + + V + Y ++D C + A I
Sbjct: 271 KAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVE-FAYGHMIDSLCRYRRNHGAARI 329
Query: 305 FNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCK 364
M +G+ P SY+ +I+GLCK A LL E P TY L++ LCK
Sbjct: 330 VYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCK 389
Query: 365 ---SGRVSHAWELV-----DDVIFIFNVWM 386
+G+ + EL+ D I+N+++
Sbjct: 390 ELDTGKARNVLELMLRKEGADRTRIYNIYL 419
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 146/345 (42%), Gaps = 3/345 (0%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P +N I+ L K A L + P +T +L+ C + A +V
Sbjct: 340 PRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNV 399
Query: 95 LAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCK 154
L +L++ T + ++GLC+ L ++ R D+ T +INGLCK
Sbjct: 400 LELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCK 459
Query: 155 MGQTRAALQLMRQIQ-GQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLAR-RVLPDV 212
MG+ A++++ + G+ PD ++ +A ++ + ++ ++ P V
Sbjct: 460 MGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGV 519
Query: 213 FTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAV 272
YNA+I G + + EA + ++ ++ D+ T+ I++D L V AK
Sbjct: 520 VAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDD 579
Query: 273 MMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKK 332
++ + D Y + + G C ++ A + G PNV Y+ +I ++
Sbjct: 580 VIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGL 639
Query: 333 VDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDD 377
EA +L EM PD VT+ ++D L S ++ EL+ +
Sbjct: 640 KREAYQILEEMRKNGQAPDAVTW-RILDKLHDSMDLTVERELISN 683
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 124/259 (47%), Gaps = 12/259 (4%)
Query: 141 DQVTYRILINGLCKMGQT-RAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
D+ +R I+ +C + + AL+++ + + +PD + +IHS C +A+
Sbjct: 53 DRAYWRRRIHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRR 112
Query: 200 YSEMLARRVLPDVFTYNALI----YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
+ LA +PD T N +I Y VS L +L+ K P +N L++
Sbjct: 113 FLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIG--FKKEFVPSLTNYNRLMN 170
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
L V +A ++ M +G PD++T+ +L+ GYC + E+ A +F+ M GI P
Sbjct: 171 QLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRP 230
Query: 316 NVHSYSIMINGLCKTKKVDEALNLLAEM-----DCKNIIPDTVTYSSLIDGLCKSGRVSH 370
N + S++I G K + V+ L+ E+ + + +++L+D +C+ G +
Sbjct: 231 NSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFND 290
Query: 371 AWELVDDVIFIFNVWMSYA 389
+E+ +++ +V + +A
Sbjct: 291 IFEIAENMSLCESVNVEFA 309
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 81/202 (40%), Gaps = 2/202 (0%)
Query: 19 DDAVSIFNRLLRMS-PTPPIIEFNKILTSLVKMKHYPTAIS-LSHQLDFTGISPDIFTLT 76
DDA+ + + ++ P + N ++ L+ A+ L+ + I P +
Sbjct: 464 DDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYN 523
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
+I + A SV ++ K D+ T+ ++ GLC+ +V A +F D V+
Sbjct: 524 AVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWP 583
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
R D Y + GLC+ G A + + P+V Y +I + L +A
Sbjct: 584 SGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREA 643
Query: 197 YNLYSEMLARRVLPDVFTYNAL 218
Y + EM PD T+ L
Sbjct: 644 YQILEEMRKNGQAPDAVTWRIL 665
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 177/393 (45%), Gaps = 40/393 (10%)
Query: 24 IFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYC 83
++ ++ + P + +N+I+ +LVK ++ A+++ G+ + T IL+ C
Sbjct: 215 VYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLC 274
Query: 84 NQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQV 143
+I +L ++ + +PD +T ++K L G + +L+ D + + D +
Sbjct: 275 KAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVM 334
Query: 144 TYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEM 203
Y L+ GLCK G+ +L +++G+ + D E+Y ++I F D V A NL+ ++
Sbjct: 335 AYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDL 394
Query: 204 LARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYT-------------- 249
+ + D+ YNA+I G C V+Q+ +A KL + + + PD T
Sbjct: 395 VDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRL 454
Query: 250 --FNILVDALGKEGN--------------VKEAKTVLAV----MMKQGVKPDIITYNSLM 289
F+ +++ +G+ G E K +A+ ++K + YN LM
Sbjct: 455 SDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILM 514
Query: 290 DGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNL---LAEMDCK 346
+ + ++ K+ +F M + G P+ SYSI I + V A + + EM C
Sbjct: 515 EALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSC- 573
Query: 347 NIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+P Y SL GLC+ G + LV + +
Sbjct: 574 --VPSIAAYLSLTKGLCQIGEIDAVMLLVRECL 604
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 135/286 (47%), Gaps = 1/286 (0%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
+N L + H+ A L +D G P ILI + + + + V K+
Sbjct: 161 YNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMK 220
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
K G++P + +M L NG AL ++ G + T+ IL+ GLCK G+
Sbjct: 221 KFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIE 280
Query: 160 AALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
L+++++++ L KPDV YT +I + + + + ++ EM + PDV Y L+
Sbjct: 281 EMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLV 340
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVK 279
G C +++ +L EM K I D + +L++ +G V+ A + ++ G
Sbjct: 341 VGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYI 400
Query: 280 PDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYS-IMI 324
DI YN+++ G C V++V+KA +F + + P+ + S IM+
Sbjct: 401 ADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMV 446
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 117/262 (44%), Gaps = 4/262 (1%)
Query: 120 NGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEM 179
N A FH +G++ D Y L + G RAA QL + Q P +
Sbjct: 136 NDAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQ 195
Query: 180 YTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMV 239
+ I+I ++ Y +Y +M P VF YN ++ A + ++
Sbjct: 196 FEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFK 255
Query: 240 TKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVN 299
+ ++ TF ILV L K G ++E +L M + KPD+ Y +++ LVSE N
Sbjct: 256 EDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIK--TLVSEGN 313
Query: 300 --KAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSS 357
+ +++ M + I P+V +Y ++ GLCK +V+ L EM K I+ D Y
Sbjct: 314 LDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRV 373
Query: 358 LIDGLCKSGRVSHAWELVDDVI 379
LI+G G+V A L +D++
Sbjct: 374 LIEGFVADGKVRSACNLWEDLV 395
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/399 (18%), Positives = 167/399 (41%), Gaps = 43/399 (10%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++ + I R+ P + + ++ +LV + ++ + ++ I PD+ L
Sbjct: 280 EEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTL 339
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
+ C ++ + + ++ + D + L++G +G+V++A + +V G+
Sbjct: 340 VVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGY 399
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D Y +I GLC + Q A +L + + ++PD E + I+ ++ +SD N
Sbjct: 400 IADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSN 459
Query: 199 LYSEMLARRVLP-----------------------DVF------------TYNALIYGFC 223
+ E + P DVF YN L+
Sbjct: 460 VL-ERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALY 518
Query: 224 IVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDII 283
+ ++++ L EM PD+ +++I + ++G+VK A + +++ P I
Sbjct: 519 KMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIA 578
Query: 284 TYNSLMDGYCLVSEVNK----AKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNL 339
Y SL G C + E++ ++ ++ P Y++ + +CK ++ + +
Sbjct: 579 AYLSLTKGLCQIGEIDAVMLLVRECLGNVES---GPMEFKYALTVCHVCKGSNAEKVMKV 635
Query: 340 LAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+ EM+ + + + V Y ++I G+ K G + A E+ ++
Sbjct: 636 VDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTEL 674
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 124/277 (44%), Gaps = 6/277 (2%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
+N ++ L + A L + PD TL+ ++ Y +++ +VL +I
Sbjct: 406 YNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIG 465
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQT-ALQFHDHVVAQGFRLDQVTYRILINGLCKMGQT 158
+ GY P + T K LC + + AL + +G V Y IL+ L KMG
Sbjct: 466 ELGY-PVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSV-YNILMEALYKMGDI 523
Query: 159 RAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNAL 218
+ +L L +++ +PD Y+I I F + V A + + +++ +P + Y +L
Sbjct: 524 QKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSL 583
Query: 219 IYGFCIVSQLKEATKLLDEMVTKNIH--PDAYTFNILVDALGKEGNVKEAKTVLAVMMKQ 276
G C + ++ +A LL N+ P + + + V + K N ++ V+ M ++
Sbjct: 584 TKGLCQIGEI-DAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQE 642
Query: 277 GVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
GV + + Y +++ G + A+++F + +R +
Sbjct: 643 GVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKV 679
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 142/337 (42%), Gaps = 35/337 (10%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D AV++ + +++ P + +N I+ + K ++ L ++ G+ P FTL +
Sbjct: 456 DMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCI 515
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
C + A +L K+ G+ P T L+K LC NG+ A ++ D V +GF
Sbjct: 516 YGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGF 575
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
V I+GL K L+L R I
Sbjct: 576 LGHMVASTAAIDGLIKNEGVDRGLELFRDI------------------------------ 605
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
A PDV Y+ LI C + EA L +EMV+K + P T+N ++D
Sbjct: 606 -----CANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWC 660
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
KEG + + + M + PD+ITY SL+ G C ++A +N M + PN
Sbjct: 661 KEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRI 720
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTY 355
++ +I GLCK EAL EM+ K + PD+ Y
Sbjct: 721 TFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 147/305 (48%)
Query: 67 GISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA 126
I PD +L+I+INC ++ A ++L I++ G P + + +++G+C G+ + +
Sbjct: 434 AILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEES 493
Query: 127 LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS 186
L+ + G Q T + L + AL L+++++ +P ++ T ++
Sbjct: 494 LKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKK 553
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
C++ DA ++ L + A I G + +L ++ PD
Sbjct: 554 LCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPD 613
Query: 247 AYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFN 306
+++L+ AL K EA + M+ +G+KP + TYNS++DG+C E+++
Sbjct: 614 VIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIV 673
Query: 307 SMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
M + P+V +Y+ +I+GLC + + EA+ EM K+ P+ +T+ +LI GLCK G
Sbjct: 674 RMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCG 733
Query: 367 RVSHA 371
A
Sbjct: 734 WSGEA 738
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 174/365 (47%), Gaps = 27/365 (7%)
Query: 19 DDAVSIFNRLLRMS-PTPPIIEFNKILTSLVKMKHYPTAISLSH--QLDFTGISPDIFTL 75
D+A S+F+R+ M P +N +L ++ K + + ++ G D FTL
Sbjct: 158 DEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTL 217
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
T ++ YCN + A SV +IL RG+ + I+ T L+ C GQV A + + +
Sbjct: 218 TPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEMLEE 276
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
+ RL+ TY +LI+G K + A QL +++ + D+ +Y ++I CK K +
Sbjct: 277 RDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEM 336
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYT--FNIL 253
A +LY E+ + PD L+ F S+L T E++ +I + + L
Sbjct: 337 ALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRIT----EVIIGDIDKKSVMLLYKSL 392
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
+ + V EA + + +M Y S DG VSE+ K N + I
Sbjct: 393 FEGFIRNDLVHEAYSFIQNLMGN--------YES--DG---VSEIVKLLKDHN----KAI 435
Query: 314 APNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWE 373
P+ S SI+IN L K KVD A+ LL ++ +IP + Y+++I+G+CK GR + +
Sbjct: 436 LPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLK 495
Query: 374 LVDDV 378
L+ ++
Sbjct: 496 LLGEM 500
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 95/440 (21%), Positives = 166/440 (37%), Gaps = 87/440 (19%)
Query: 18 ADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTI 77
++ A+S+FN +L I ++ S K A L L+ I + T +
Sbjct: 230 SERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCV 288
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
LI+ + +++I AF + K+ + G D + L+ GLC + ++ AL + + G
Sbjct: 289 LIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSG 348
Query: 138 F------------------RLDQVT---------------YRILINGLCKMGQTRAALQL 164
L ++T Y+ L G + A
Sbjct: 349 IPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSF 408
Query: 165 MRQIQG--------QLVK----------PDVEMYTIIIHSFCKDKLVSDAYNLYSEMLAR 206
++ + G ++VK PD + +I+I+ K V A L +++
Sbjct: 409 IQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQN 468
Query: 207 RVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFN--------------- 251
++P YN +I G C + +E+ KLL EM + P +T N
Sbjct: 469 GLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGA 528
Query: 252 --------------------ILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDG 291
LV L + G +A L + +G ++ + +DG
Sbjct: 529 LDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDG 588
Query: 292 YCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPD 351
V++ ++F + G P+V +Y ++I LCK + EA L EM K + P
Sbjct: 589 LIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPT 648
Query: 352 TVTYSSLIDGLCKSGRVSHA 371
TY+S+IDG CK G +
Sbjct: 649 VATYNSMIDGWCKEGEIDRG 668
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 159/338 (47%), Gaps = 6/338 (1%)
Query: 33 PTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL-TILINCYCNQAQITSA 91
P P ++E + + L + AI + + L GIS + T ++L+ C +A+
Sbjct: 143 PEPTLLE--QYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCL--KARKLDR 198
Query: 92 FSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILING 151
F L K + D+ L++ LC G V + + QG Q Y LI+G
Sbjct: 199 FWELHKEMVES-EFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISG 257
Query: 152 LCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPD 211
C++G +++ + P + +Y II C +K +AY ++ + + PD
Sbjct: 258 FCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPD 317
Query: 212 VFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLA 271
Y +I GFC L A KL EM+ K + P+ + +N+++ K G + +
Sbjct: 318 RVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYN 377
Query: 272 VMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTK 331
M++ G +++ N+++ G+C + ++A +IF +M + G+ PN +Y+ +I G CK
Sbjct: 378 EMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKEN 437
Query: 332 KVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVS 369
KV++ L L E+ + P + Y++L+ L S V+
Sbjct: 438 KVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVA 475
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 151/345 (43%), Gaps = 5/345 (1%)
Query: 34 TPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFS 93
TP + N + +L+ K A S LD TG P+ L + C + + A
Sbjct: 110 TPGPVSLNILFGALLDGKAVKAAKSF---LDTTGFKPEPTLLEQYVKCLSEEGLVEEAIE 166
Query: 94 VLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLC 153
V + G +T +++ G ++ + H +V F +++ R LI LC
Sbjct: 167 VYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERI--RCLIRALC 224
Query: 154 KMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVF 213
G +L++Q Q + P +Y +I FC+ + + M+A P ++
Sbjct: 225 DGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMY 284
Query: 214 TYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVM 273
Y +I G C+ + EA + + K PD + ++ ++G + A+ + M
Sbjct: 285 IYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEM 344
Query: 274 MKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKV 333
+K+G++P+ YN ++ G+ E++ + +N M + G + S + MI G C K
Sbjct: 345 IKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKS 404
Query: 334 DEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
DEA + M + P+ +TY++LI G CK +V +L ++
Sbjct: 405 DEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKEL 449
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 144/321 (44%), Gaps = 2/321 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++A+ ++N L M + ++ N +L +K + L ++ + + + L
Sbjct: 162 EEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSE--RIRCL 219
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I C+ ++ + +L + LK+G P + L+ G C G + ++A
Sbjct: 220 IRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNH 279
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
Y+ +I GLC + A + + ++ + PD +YT +I FC+ + A
Sbjct: 280 FPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARK 339
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L+ EM+ + + P+ F YN +I+G ++ +EM+ + N ++
Sbjct: 340 LWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFC 399
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
G EA + M + GV P+ ITYN+L+ G+C ++V K ++ + G+ P+
Sbjct: 400 SHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGM 459
Query: 319 SYSIMINGLCKTKKVDEALNL 339
+Y+ ++ L + V +LNL
Sbjct: 460 AYAALVRNLKMSDSVATSLNL 480
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 105/241 (43%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
+ + + + L+ P + K+++ ++ +Y + H + P ++
Sbjct: 228 DVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQ 287
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
+I C + A+ + + +GY PD + +TT+++G C G + +A + ++ +
Sbjct: 288 KIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKK 347
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G R ++ Y ++I+G K G+ ++ + +I FC +A
Sbjct: 348 GMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEA 407
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
+ ++ M V P+ TYNALI GFC +++++ KL E+ + P + LV
Sbjct: 408 FEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRN 467
Query: 257 L 257
L
Sbjct: 468 L 468
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 2/206 (0%)
Query: 174 KPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATK 233
KP+ + + ++ LV +A +Y+ + + V T N+++ G +L +
Sbjct: 142 KPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWE 201
Query: 234 LLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYC 293
L EMV D+ L+ AL G+V E +L +KQG+ P Y L+ G+C
Sbjct: 202 LHKEMVESEF--DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFC 259
Query: 294 LVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTV 353
+ ++ ++M P+++ Y +I GLC KK EA + + K PD V
Sbjct: 260 EIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRV 319
Query: 354 TYSSLIDGLCKSGRVSHAWELVDDVI 379
Y+++I G C+ G + A +L ++I
Sbjct: 320 VYTTMIRGFCEKGWLGSARKLWFEMI 345
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 147/303 (48%), Gaps = 1/303 (0%)
Query: 67 GISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA 126
GI P + L L++ C++ + A K G P T++ L++G A
Sbjct: 168 GIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGA 227
Query: 127 LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS 186
+ D ++ + +D + Y L++ LCK G ++ +++ +KPD + I IH+
Sbjct: 228 RKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHA 287
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
+C V AY + M ++P+V+T+N +I C ++ +A LLDEM+ K +PD
Sbjct: 288 YCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPD 347
Query: 247 AYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFN 306
+T+N ++ V A +L+ M + PD TYN ++ + ++A +I+
Sbjct: 348 TWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWE 407
Query: 307 SMPQRGIAPNVHSYSIMINGLCKTK-KVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKS 365
M +R P V +Y++MI+GL + K K++EA M + I P + T L + L
Sbjct: 408 GMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGW 467
Query: 366 GRV 368
G++
Sbjct: 468 GQM 470
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 145/313 (46%), Gaps = 3/313 (0%)
Query: 60 SHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCL 119
+ + ++ IS +F I+ Y + A ++++ G +P L+ LC
Sbjct: 128 AREYNYFEISSKVFW--IVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCD 185
Query: 120 NGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEM 179
V A +F G TY IL+ G ++ A ++ ++ + D+
Sbjct: 186 KKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLA 245
Query: 180 YTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMV 239
Y ++ + CK V Y ++ EM + PD +++ I+ +C + A K+LD M
Sbjct: 246 YNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMK 305
Query: 240 TKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVN 299
++ P+ YTFN ++ L K V +A +L M+++G PD TYNS+M +C EVN
Sbjct: 306 RYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVN 365
Query: 300 KAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLI 359
+A + + M + P+ H+Y++++ L + + D A + M + P TY+ +I
Sbjct: 366 RATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMI 425
Query: 360 DGLC-KSGRVSHA 371
GL K G++ A
Sbjct: 426 HGLVRKKGKLEEA 438
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 153/328 (46%), Gaps = 5/328 (1%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A FNR++ P + + +++L SL KH A + GI P T +IL+
Sbjct: 156 EACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILV 215
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ + A V ++L+R D + + L+ LC +G V + + G +
Sbjct: 216 RGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLK 275
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
D ++ I I+ C G +A +++ +++ + P+V + II + CK++ V DAY L
Sbjct: 276 PDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLL 335
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
EM+ + PD +TYN+++ C ++ ATKLL M PD +T+N+++ L +
Sbjct: 336 LDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIR 395
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKD---IFNSMPQRGIAPN 316
G A + M ++ P + TY ++ G LV + K ++ F M GI P
Sbjct: 396 IGRFDRATEIWEGMSERKFYPTVATYTVMIHG--LVRKKGKLEEACRYFEMMIDEGIPPY 453
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMD 344
+ ++ N L ++D L +M+
Sbjct: 454 STTVEMLRNRLVGWGQMDVVDVLAGKME 481
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 108/203 (53%)
Query: 173 VKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEAT 232
+KP V+ ++HS C K V+ A + + ++P TY+ L+ G+ + A
Sbjct: 169 IKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGAR 228
Query: 233 KLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGY 292
K+ DEM+ +N D +N L+DAL K G+V + M G+KPD ++ + Y
Sbjct: 229 KVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAY 288
Query: 293 CLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDT 352
C +V+ A + + M + + PNV++++ +I LCK +KVD+A LL EM K PDT
Sbjct: 289 CDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDT 348
Query: 353 VTYSSLIDGLCKSGRVSHAWELV 375
TY+S++ C V+ A +L+
Sbjct: 349 WTYNSIMAYHCDHCEVNRATKLL 371
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 116/236 (49%), Gaps = 3/236 (1%)
Query: 148 LINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARR 207
L++ LC A + + +G + P + Y+I++ + + + S A ++ EML R
Sbjct: 179 LLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERN 238
Query: 208 VLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAK 267
+ D+ YNAL+ C + K+ EM + PDAY+F I + A G+V A
Sbjct: 239 CVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAY 298
Query: 268 TVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGL 327
VL M + + P++ T+N ++ C +V+ A + + M Q+G P+ +Y+ ++
Sbjct: 299 KVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYH 358
Query: 328 CKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA---WELVDDVIF 380
C +V+ A LL+ MD +PD TY+ ++ L + GR A WE + + F
Sbjct: 359 CDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKF 414
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 123/264 (46%), Gaps = 2/264 (0%)
Query: 15 IRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFT 74
IR+A A +F+ +L + ++ +N +L +L K + ++ G+ PD ++
Sbjct: 221 IRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYS 280
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
I I+ YC+ + SA+ VL ++ + P+ TF ++K LC N +V A D ++
Sbjct: 281 FAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMI 340
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
+G D TY ++ C + A +L+ ++ PD Y +++ +
Sbjct: 341 QKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFD 400
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFC-IVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
A ++ M R+ P V TY +I+G +L+EA + + M+ + I P + T +L
Sbjct: 401 RATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEML 460
Query: 254 VDALGKEGNVKEAKTVLAVMMKQG 277
+ L G + + VLA M++
Sbjct: 461 RNRLVGWGQM-DVVDVLAGKMERS 483
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 103/202 (50%)
Query: 178 EMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDE 237
+++ I+ ++ + L S+A ++ M+ + P V + L++ C + A + +
Sbjct: 139 KVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGK 198
Query: 238 MVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSE 297
I P A T++ILV + + A+ V M+++ D++ YN+L+D C +
Sbjct: 199 AKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGD 258
Query: 298 VNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSS 357
V+ +F M G+ P+ +S++I I+ C V A +L M +++P+ T++
Sbjct: 259 VDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNH 318
Query: 358 LIDGLCKSGRVSHAWELVDDVI 379
+I LCK+ +V A+ L+D++I
Sbjct: 319 IIKTLCKNEKVDDAYLLLDEMI 340
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 146/315 (46%), Gaps = 41/315 (13%)
Query: 103 YRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAAL 162
+R ++ LMK G+ + + D +V GF T+ +LI C G+ A
Sbjct: 145 FRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLI---CSCGEAGLAK 201
Query: 163 QLMRQIQGQLV---KPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
Q + Q +P Y I++S K +Y +ML PDV TYN L+
Sbjct: 202 QAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILL 261
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL-------------------------- 253
+ + ++ +L DEM PD+YT+NIL
Sbjct: 262 WTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGID 321
Query: 254 ---------VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDI 304
+D L + GN++ K L M+K G +PD++ Y ++ GY + E++KAK++
Sbjct: 322 PSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEM 381
Query: 305 FNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCK 364
F M +G PNV +Y+ MI GLC + EA LL EM+ + P+ V YS+L+ L K
Sbjct: 382 FREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRK 441
Query: 365 SGRVSHAWELVDDVI 379
+G++S A +++ +++
Sbjct: 442 AGKLSEARKVIREMV 456
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 127/260 (48%)
Query: 18 ADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTI 77
A AV F + + P +N IL SL+ +K Y + Q+ G SPD+ T I
Sbjct: 200 AKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNI 259
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
L+ ++ + ++ + G+ PD+ T+ L+ L + AL +H+ G
Sbjct: 260 LLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVG 319
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
+ Y LI+GL + G A + ++ +PDV YT++I + + A
Sbjct: 320 IDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAK 379
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
++ EM + LP+VFTYN++I G C+ + +EA LL EM ++ +P+ ++ LV L
Sbjct: 380 EMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYL 439
Query: 258 GKEGNVKEAKTVLAVMMKQG 277
K G + EA+ V+ M+K+G
Sbjct: 440 RKAGKLSEARKVIREMVKKG 459
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 105/219 (47%)
Query: 94 VLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLC 153
V ++L+ G+ PD +T+ L+ G++ + D + GF D TY IL++ L
Sbjct: 241 VYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILG 300
Query: 154 KMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVF 213
K + AAL + ++ + P V YT +I + + EM+ PDV
Sbjct: 301 KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVV 360
Query: 214 TYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVM 273
Y +I G+ + +L +A ++ EM K P+ +T+N ++ L G +EA +L M
Sbjct: 361 CYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEM 420
Query: 274 MKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG 312
+G P+ + Y++L+ ++++A+ + M ++G
Sbjct: 421 ESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 182/401 (45%), Gaps = 44/401 (10%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTG---ISPDIFTLT 76
+A+S+F R+L+ P ++ FN ++ K A+ L ++ +SP+ T
Sbjct: 236 EALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYN 295
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
+IN +C ++ A + ++K G + T+ L+ G AL+ D + ++
Sbjct: 296 SVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSK 355
Query: 137 GF-----------------------------------RLDQVTYRILINGLCKMGQTRAA 161
G ++D+ T I++ GLC+ G + A
Sbjct: 356 GLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEA 415
Query: 162 LQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYG 221
++ RQI + + D+ + ++H F +DK ++ A + ML + + D ++ LI G
Sbjct: 416 VEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDG 475
Query: 222 FCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPD 281
+ +L+ A ++ D M+ N + +N +V+ L K G A+ V+ M + D
Sbjct: 476 YLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIK----D 531
Query: 282 IITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH--SYSIMINGLCKTKKVDEALNL 339
I+TYN+L++ V +A DI + M ++ +V +++IMIN LCK ++A +
Sbjct: 532 IVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEV 591
Query: 340 LAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVIF 380
L M + ++PD++TY +LI K EL D +I
Sbjct: 592 LKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLIL 632
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 171/344 (49%), Gaps = 11/344 (3%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
N + L+ + + ++D G ++ T ++I +C ++++ A SV ++L
Sbjct: 186 LNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRML 245
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL---DQVTYRILINGLCKMG 156
K G P+ ++F ++ G C G ++ ALQ + + VTY +ING CK G
Sbjct: 246 KCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAG 305
Query: 157 QTRAALQLMRQIQGQLVKPDVE----MYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDV 212
+ L L +I+G +VK V+ Y ++ ++ + +A L EM ++ ++ +
Sbjct: 306 R----LDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNT 361
Query: 213 FTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAV 272
YN+++Y + ++ A +L +M +KN+ D +T I+V L + G VKEA
Sbjct: 362 VIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQ 421
Query: 273 MMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKK 332
+ ++ + DI+ +N+LM + ++ A I SM +G++ + S+ +I+G K K
Sbjct: 422 ISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGK 481
Query: 333 VDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
++ AL + M N + V Y+S+++GL K G A +V+
Sbjct: 482 LERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVN 525
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 175/388 (45%), Gaps = 26/388 (6%)
Query: 16 RNADDAVSIFNRLL-----RMSP----------------TPPIIEFNKILTSLVKMKHYP 54
R DDA+SI L+ ++SP +P + F+ ++ + +
Sbjct: 108 RRFDDALSIMANLMSVEGEKLSPLHVLSGLIRSYQACGSSPDV--FDSLVRACTQNGDAQ 165
Query: 55 TAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLM 114
A + Q G + L + C N +I + V ++ GY + TF ++
Sbjct: 166 GAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVI 225
Query: 115 KGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQL---MRQIQGQ 171
C ++ AL ++ G + V++ ++I+G CK G R ALQL M + G
Sbjct: 226 YSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGN 285
Query: 172 LVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEA 231
V P+ Y +I+ FCK + A + +M+ V + TY AL+ + EA
Sbjct: 286 FVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEA 345
Query: 232 TKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDG 291
+L DEM +K + + +N +V L EG+++ A +VL M + ++ D T ++ G
Sbjct: 346 LRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRG 405
Query: 292 YCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPD 351
C V +A + + ++ + ++ ++ +++ + KK+ A +L M + + D
Sbjct: 406 LCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLD 465
Query: 352 TVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+++ +LIDG K G++ A E+ D +I
Sbjct: 466 AISFGTLIDGYLKEGKLERALEIYDGMI 493
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 141/306 (46%), Gaps = 6/306 (1%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
++D+A+ + + + + +N I+ L A+S+ ++ + D FT
Sbjct: 341 SSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQA 400
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
I++ C + A +I ++ D + TLM + ++ A Q ++ Q
Sbjct: 401 IVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQ 460
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G LD +++ LI+G K G+ AL++ + ++ +Y I++ K + A
Sbjct: 461 GLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAA 520
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDA--YTFNILV 254
+ + M + D+ TYN L+ ++EA +L +M ++ TFNI++
Sbjct: 521 EAVVNAM----EIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMI 576
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
+ L K G+ ++AK VL M+++GV PD ITY +L+ + K ++ + + +G+
Sbjct: 577 NHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVT 636
Query: 315 PNVHSY 320
P+ H Y
Sbjct: 637 PHEHIY 642
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 170/348 (48%), Gaps = 5/348 (1%)
Query: 32 SPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSA 91
SP P +N+++ K++ + A L + + I T TILI Y + A
Sbjct: 150 SPHP----YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEA 205
Query: 92 FSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILING 151
++ G PD I F+ ++ L + A F D + F D + Y L+ G
Sbjct: 206 VHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDS-LKDRFEPDVIVYTNLVRG 264
Query: 152 LCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPD 211
C+ G+ A ++ ++++ ++P+V Y+I+I + C+ +S A++++++ML P+
Sbjct: 265 WCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPN 324
Query: 212 VFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLA 271
T+N L+ + ++ ++ ++M PD T+N L++A ++ N++ A VL
Sbjct: 325 AITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLN 384
Query: 272 VMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTK 331
M+K+ + + T+N++ +VN A +++ M + PN +Y+I++ +K
Sbjct: 385 TMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSK 444
Query: 332 KVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
D L + EMD K + P+ TY L+ C G ++A++L +++
Sbjct: 445 STDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMV 492
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 149/325 (45%), Gaps = 2/325 (0%)
Query: 56 AISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMK 115
A+ ++++ G PD +I+I+ + + + A S LK + PD I +T L++
Sbjct: 205 AVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDS-LKDRFEPDVIVYTNLVR 263
Query: 116 GLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKP 175
G C G++ A + + G + TY I+I+ LC+ GQ A + + P
Sbjct: 264 GWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAP 323
Query: 176 DVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLL 235
+ + ++ K +Y++M PD TYN LI C L+ A K+L
Sbjct: 324 NAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVL 383
Query: 236 DEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLV 295
+ M+ K +A TFN + + K+ +V A + + MM+ +P+ +TYN LM +
Sbjct: 384 NTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGS 443
Query: 296 SEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM-DCKNIIPDTVT 354
+ + M + + PNV++Y +++ C + A L EM + K + P
Sbjct: 444 KSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSL 503
Query: 355 YSSLIDGLCKSGRVSHAWELVDDVI 379
Y ++ L ++G++ ELV+ +I
Sbjct: 504 YEMVLAQLRRAGQLKKHEELVEKMI 528
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 244 HPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKD 303
H + +N ++D GK A ++ +M + V+ I T+ L+ Y ++A
Sbjct: 148 HKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVH 207
Query: 304 IFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLC 363
FN M G P+ ++SI+I+ L + ++ EA + + PD + Y++L+ G C
Sbjct: 208 CFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLK-DRFEPDVIVYTNLVRGWC 266
Query: 364 KSGRVSHA 371
++G +S A
Sbjct: 267 RAGEISEA 274
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 175/345 (50%), Gaps = 6/345 (1%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAI-SLSHQLDFTGI--SPDIFTL 75
DDA ++ + +++ P + ++T+L K + + ++ G+ S D+F
Sbjct: 290 DDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFG- 348
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
L+ +C++ A + ++ K+G R +TI + TLM + ++ +
Sbjct: 349 -GLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRD 407
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
+G + TY IL++ + Q L+R+++ ++P+V+ YT +I ++ + K +SD
Sbjct: 408 KGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSD 467
Query: 196 -AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
A + + M + P +Y ALI+ + + ++A +EM + I P T+ ++
Sbjct: 468 MAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVL 527
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
DA + G+ + + +M+++ +K ITYN+L+DG+ +A+D+ + + G+
Sbjct: 528 DAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQ 587
Query: 315 PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLI 359
P+V +Y++++N + + + LL EM N+ PD++TYS++I
Sbjct: 588 PSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMI 632
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 131/319 (41%), Gaps = 16/319 (5%)
Query: 38 IEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAK 97
I +N ++ + K H L ++ G+ P T IL++ Y + Q ++L +
Sbjct: 380 IVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLRE 439
Query: 98 ILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQV-------TYRILIN 150
+ G P+ ++T CL + D R+ +V +Y LI+
Sbjct: 440 MEDLGLEPNVKSYT------CLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIH 493
Query: 151 GLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLP 210
G A ++ + +KP VE YT ++ +F + ++ ML ++
Sbjct: 494 AYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKG 553
Query: 211 DVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVL 270
TYN L+ GF EA ++ E + P T+N+L++A + G + +L
Sbjct: 554 TRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLL 613
Query: 271 AVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYS---IMINGL 327
M +KPD ITY++++ + V + +A M + G P+ SY ++
Sbjct: 614 KEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDK 673
Query: 328 CKTKKVDEALNLLAEMDCK 346
KTK + +L ++ K
Sbjct: 674 AKTKNRKDKTAILGIINSK 692
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 123/271 (45%), Gaps = 1/271 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++ +F + P +N ++ + + +L +++ G+ P++ + T L
Sbjct: 396 EEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCL 455
Query: 79 INCYCNQAQITS-AFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
I+ Y +++ A ++ K G +P + ++T L+ ++G + A + + +G
Sbjct: 456 ISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEG 515
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
+ TY +++ + G T +++ + + + +K Y ++ F K L +A
Sbjct: 516 IKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEAR 575
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
++ SE + P V TYN L+ + Q + +LL EM N+ PD+ T++ ++ A
Sbjct: 576 DVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAF 635
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSL 288
+ + K A +M+K G PD +Y L
Sbjct: 636 VRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 1/195 (0%)
Query: 176 DVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQ-LKEATKL 234
DV +Y I + DA+ +Y M V PD T LI + KE ++
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 235 LDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCL 294
++M K + F LV + EG +EA + M K+G++ + I YN+LMD Y
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 295 VSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVT 354
+ + + + +F M +G+ P+ +Y+I+++ + + D LL EM+ + P+ +
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
Query: 355 YSSLIDGLCKSGRVS 369
Y+ LI ++ ++S
Sbjct: 452 YTCLISAYGRTKKMS 466
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 84/201 (41%)
Query: 18 ADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTI 77
+D A F R+ ++ P + ++ + + A + ++ GI P + T T
Sbjct: 466 SDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTS 525
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
+++ + + +L+ + IT+ TL+ G G A G
Sbjct: 526 VLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMG 585
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
+ +TY +L+N + GQ QL++++ +KPD Y+ +I++F + + A+
Sbjct: 586 LQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAF 645
Query: 198 NLYSEMLARRVLPDVFTYNAL 218
+ M+ +PD +Y L
Sbjct: 646 FYHKMMVKSGQVPDPRSYEKL 666
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 178/369 (48%), Gaps = 13/369 (3%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A ++F L P +I + +L ++ K Y + S+ +++ +G D +I
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG-- 137
N + + A L K+ + G P T T+ TL+KG + G+ + + + D ++ +G
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 138 -FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFC-KDKLVSD 195
+ T+ +L+ CK + A +++++++ V+PD Y I + K + V
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA 242
Query: 196 AYNLYSEMLAR-RVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
+ +M+ + + P+ T ++ G+C ++++ + + M + + FN L+
Sbjct: 243 ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLI 302
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
+ + + VL +M + VK D+ITY+++M+ + + KA +F M + G+
Sbjct: 303 NGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVK 362
Query: 315 PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
P+ H+YSI+ G + K+ +A LL + ++ P+ V ++++I G C +G
Sbjct: 363 PDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGS------- 414
Query: 375 VDDVIFIFN 383
+DD + +FN
Sbjct: 415 MDDAMRVFN 423
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 168/344 (48%), Gaps = 6/344 (1%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTS---LVKMKHYPTAISLSHQLDFTGISPDIF 73
N +DAV ++ + P +N ++ K + + L + + P+I
Sbjct: 130 NMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIR 189
Query: 74 TLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQ--FHD 131
T +L+ +C + ++ A+ V+ K+ + G RPDT+T+ T+ G+ A
Sbjct: 190 TFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEK 249
Query: 132 HVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDK 191
V+ + + + T I++ G C+ G+ R L+ +R+++ V+ ++ ++ +I+ F +
Sbjct: 250 MVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVM 309
Query: 192 LVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFN 251
+ + M V DV TY+ ++ + +++A ++ EMV + PDA+ ++
Sbjct: 310 DRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYS 369
Query: 252 ILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQR 311
IL + K+A+ +L ++ + +P+++ + +++ G+C ++ A +FN M +
Sbjct: 370 ILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKF 428
Query: 312 GIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTY 355
G++PN+ ++ ++ G + K+ +A +L M + P+ T+
Sbjct: 429 GVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF 472
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 148/316 (46%), Gaps = 3/316 (0%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P I FN ++ + K K A + +++ G+ PD T + CY + + A S
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 95 LAK--ILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGL 152
+ + ++K +P+ T ++ G C G+V+ L+F + + V + LING
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 153 CKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDV 212
++ +++ ++ VK DV Y+ +++++ + A ++ EM+ V PD
Sbjct: 306 VEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDA 365
Query: 213 FTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAV 272
Y+ L G+ + K+A +LL+ ++ ++ P+ F ++ G++ +A V
Sbjct: 366 HAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNK 424
Query: 273 MMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKK 332
M K GV P+I T+ +LM GY V + KA+++ M G+ P ++ ++
Sbjct: 425 MCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGL 484
Query: 333 VDEALNLLAEMDCKNI 348
DE+ + + CK+I
Sbjct: 485 TDESNKAINALKCKDI 500
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 176/393 (44%), Gaps = 35/393 (8%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGI-SPDIFTLTI--------------------- 77
+N +++ L K + + T +S+ ++ G+ + + FT+ +
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKK 257
Query: 78 --------LINCYCN---QAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA 126
INC + +A++ VL LK + P+ +T+T L+ G C + A
Sbjct: 258 YKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEA 317
Query: 127 LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS 186
+ + ++ QG + D V + +++ GL + + A++L ++ + P+V YTI+I
Sbjct: 318 ARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRD 377
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
FCK + A + +M+ + PD Y LI GF +L +LL EM K PD
Sbjct: 378 FCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPD 437
Query: 247 AYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFN 306
T+N L+ + + + A + M++ ++P I T+N +M Y + + ++
Sbjct: 438 GKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWE 497
Query: 307 SMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
M ++GI P+ +SY+++I GL K EA L EM K + + Y+ + G
Sbjct: 498 EMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGG 557
Query: 367 RVSHAWELVDDVIFI--FNVWMSYAKAIKLTRQ 397
+ EL F F +A+ ++TR+
Sbjct: 558 QPEIFEELAQRAKFSGKFAAAEIFARWAQMTRR 590
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 137/293 (46%), Gaps = 5/293 (1%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A +F++L + TP ++ + +L ++++ A + + + G+ PDI +++
Sbjct: 282 EAQVLFDKL-KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVML 340
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ + A + + +G P+ ++T +++ C ++TA+++ D +V G +
Sbjct: 341 EGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 400
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
D Y LI G + +L++++Q + PD + Y +I K+ A +
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRI 460
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
Y++M+ + P + T+N ++ + + + + +EM+ K I PD ++ +L+ L
Sbjct: 461 YNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIG 520
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG 312
EG +EA L M+ +G+K +I YN + +IF + QR
Sbjct: 521 EGKSREACRYLEEMLDKGMKTPLIDYNKFAADF----HRGGQPEIFEELAQRA 569
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 135/293 (46%), Gaps = 1/293 (0%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
AV IF + + + N +L SL + K A L +L +P++ T T+L+N
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLN 306
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
+C + A + ++ +G +PD + +++GL + + A++ + ++G
Sbjct: 307 GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCP 366
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
+ +Y I+I CK A++ + ++PD +YT +I F K + Y L
Sbjct: 367 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 426
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
EM + PD TYNALI + AT++ ++M+ I P +TFN+++ +
Sbjct: 427 KEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMA 486
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
N + + V M+K+G+ PD +Y L+ G + +A M +G+
Sbjct: 487 RNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGM 539
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 119/245 (48%), Gaps = 6/245 (2%)
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQI--QGQLVKPDVEMYTIIIHSFCKDKLV 193
QGF D TY +++ L K Q + ++ ++ +G L +E +TI + +F K
Sbjct: 189 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT---METFTIAMKAFAAAKER 245
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
A ++ M + V T N L+ KEA L D++ + P+ T+ +L
Sbjct: 246 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVL 304
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
++ + N+ EA + M+ QG+KPDI+ +N +++G + + A +F+ M +G
Sbjct: 305 LNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGP 364
Query: 314 APNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWE 373
PNV SY+IMI CK ++ A+ +M + PD Y+ LI G ++ +E
Sbjct: 365 CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 424
Query: 374 LVDDV 378
L+ ++
Sbjct: 425 LLKEM 429
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 103/204 (50%), Gaps = 2/204 (0%)
Query: 176 DVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLL 235
D Y ++ K + ++ EM + +L + T+ + F + K+A +
Sbjct: 194 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIF 252
Query: 236 DEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLV 295
+ M T N L+D+LG+ KEA+ VL +K+ P+++TY L++G+C V
Sbjct: 253 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ-VLFDKLKERFTPNMMTYTVLLNGWCRV 311
Query: 296 SEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTY 355
+ +A I+N M +G+ P++ ++++M+ GL +++K +A+ L M K P+ +Y
Sbjct: 312 RNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSY 371
Query: 356 SSLIDGLCKSGRVSHAWELVDDVI 379
+ +I CK + A E DD++
Sbjct: 372 TIMIRDFCKQSSMETAIEYFDDMV 395
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 164/352 (46%), Gaps = 8/352 (2%)
Query: 21 AVSIFNRLLRMSPT--PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
AV IF R PT + +N ++ + + A L + G PD+ + L
Sbjct: 210 AVEIFTR---AEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTL 266
Query: 79 INCYCNQAQITS--AFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
IN +T A +L + G RPD IT+ TL+ + + A++ + + A
Sbjct: 267 INARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAH 326
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
+ D TY +I+ + G A +L +++ + PD Y ++++F +++
Sbjct: 327 RCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKV 386
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVT-KNIHPDAYTFNILVD 255
+Y +M D TYN +I+ + QL A +L +M +PDA T+ +L+D
Sbjct: 387 KEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLID 446
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
+LGK EA +++ M+ G+KP + TY++L+ GY + +A+D F+ M + G P
Sbjct: 447 SLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKP 506
Query: 316 NVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGR 367
+ +YS+M++ L + + +A L +M P Y +I GL K R
Sbjct: 507 DNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENR 558
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 162/363 (44%), Gaps = 5/363 (1%)
Query: 21 AVSIFNRL-LRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
A+ +F L LR +P IL L + A+ + + + T + + ++
Sbjct: 174 ALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPT-VGDRVQVYNAMM 232
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQV--QTALQFHDHVVAQG 137
Y + + A ++ + +RG PD I+F TL+ +G + A++ D V G
Sbjct: 233 GVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSG 292
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
R D +TY L++ + A+++ ++ +PD+ Y +I + + L ++A
Sbjct: 293 LRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAE 352
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
L+ E+ + PD TYN+L+Y F ++ ++ +M D T+N ++
Sbjct: 353 RLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMY 412
Query: 258 GKEGNVKEAKTVLAVMMK-QGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
GK+G + A + M G PD ITY L+D + +A + + M GI P
Sbjct: 413 GKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPT 472
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
+ +YS +I G K K +EA + + M PD + YS ++D L + AW L
Sbjct: 473 LQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYR 532
Query: 377 DVI 379
D+I
Sbjct: 533 DMI 535
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 140/316 (44%), Gaps = 9/316 (2%)
Query: 35 PPIIEFNKILTSLVKMKHYPT--AISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAF 92
P +I FN ++ + +K A+ L + +G+ PD T L++ + + A
Sbjct: 258 PDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAV 317
Query: 93 SVLAKILKRGYRPDTITFTTLMK--GLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILIN 150
V + +PD T+ ++ G C G A + + +GF D VTY L+
Sbjct: 318 KVFEDMEAHRCQPDLWTYNAMISVYGRC--GLAAEAERLFMELELKGFFPDAVTYNSLLY 375
Query: 151 GLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEM--LARRV 208
+ T ++ +Q+Q D Y IIH + K + A LY +M L+ R
Sbjct: 376 AFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRN 435
Query: 209 LPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKT 268
PD TY LI ++ EA L+ EM+ I P T++ L+ K G +EA+
Sbjct: 436 -PDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAED 494
Query: 269 VLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLC 328
+ M++ G KPD + Y+ ++D +E KA ++ M G P+ Y +MI GL
Sbjct: 495 TFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLM 554
Query: 329 KTKKVDEALNLLAEMD 344
K + D+ + +M+
Sbjct: 555 KENRSDDIQKTIRDME 570
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/361 (20%), Positives = 156/361 (43%), Gaps = 35/361 (9%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
+ I+ + K K + A S+ L +G +PD+ T L++ Y A ++ ++
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
+ G P + L+ LC++G+++ + + GF++ + + ++++ + G
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 160 AALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEM---------------- 203
++ ++ P + +Y ++I CK K V DA + SEM
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 204 --------------LARRVL-----PDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIH 244
+ +R+ PD TYN LI +C + +E L+ +M +
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD 994
Query: 245 PDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDI 304
P T+ L+ A GK+ +++A+ + ++ +G+K D Y+++M +KA+ +
Sbjct: 995 PKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKL 1054
Query: 305 FNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCK 364
M GI P + + +++ + EA +L+ + + T+ YSS+ID +
Sbjct: 1055 LQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLR 1114
Query: 365 S 365
S
Sbjct: 1115 S 1115
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/341 (18%), Positives = 154/341 (45%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+ A +IFN ++R P+P + N +L +L + +L G ++ ++
Sbjct: 804 ERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLM 863
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
++ + I + + + GY P + +++ LC +V+ A + F
Sbjct: 864 LDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANF 923
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+++ + ++ + + +Q+ ++I+ ++PD Y +I +C+D+ + Y
Sbjct: 924 KVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYL 983
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L +M + P + TY +LI F L++A +L +E+++K + D ++ ++
Sbjct: 984 LMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISR 1043
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
G+ +A+ +L +M G++P + T + LM Y +A+ + +++ +
Sbjct: 1044 DSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTL 1103
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLI 359
YS +I+ ++K + + L EM + + PD ++ +
Sbjct: 1104 PYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFV 1144
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 124/280 (44%), Gaps = 3/280 (1%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N D AV +F + P + +N +++ + A L +L+ G PD T
Sbjct: 312 NLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYN 371
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQ-FHDHVVA 135
L+ + + V ++ K G+ D +T+ T++ GQ+ ALQ + D
Sbjct: 372 SLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGL 431
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
G D +TY +LI+ L K +T A LM ++ +KP ++ Y+ +I + K +
Sbjct: 432 SGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREE 491
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
A + +S ML PD Y+ ++ ++ ++A L +M++ P + +++
Sbjct: 492 AEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMIL 551
Query: 256 ALGKEGNVKE-AKTVLAVMMKQGVKPDIITYNSLMDGYCL 294
L KE + KT+ + G+ P I+ + L+ G C
Sbjct: 552 GLMKENRSDDIQKTIRDMEELCGMNPLEIS-SVLVKGECF 590
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 114/254 (44%), Gaps = 7/254 (2%)
Query: 110 FTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQ 169
+ TL+ N A Q + G + + ++ CK+G A Q++ Q +
Sbjct: 684 YETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAE 743
Query: 170 GQ----LVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIV 225
+ P MYT II ++ K KL A ++ + PD+ T+N+L+ +
Sbjct: 744 TKGFHFACSP---MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQC 800
Query: 226 SQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITY 285
+ A + + M+ P + NIL+ AL +G ++E V+ + G K +
Sbjct: 801 GCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSI 860
Query: 286 NSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDC 345
++D + + + K I++SM G P + Y +MI LCK K+V +A +++EM+
Sbjct: 861 LLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEE 920
Query: 346 KNIIPDTVTYSSLI 359
N + ++S++
Sbjct: 921 ANFKVELAIWNSML 934
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/360 (18%), Positives = 146/360 (40%), Gaps = 10/360 (2%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
+ +L V +HY A + L +G ++ YC +A V+ +
Sbjct: 684 YETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAE 743
Query: 100 KRGYR-PDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQT 158
+G+ + +T +++ Q A ++ G D T+ L++ + G
Sbjct: 744 TKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCY 803
Query: 159 RAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNAL 218
A + + P VE I++H+ C D + + Y + E+ + +
Sbjct: 804 ERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLM 863
Query: 219 IYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGV 278
+ F + E K+ M P + ++++ L K V++A+ +++ M +
Sbjct: 864 LDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANF 923
Query: 279 KPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALN 338
K ++ +NS++ Y + + K ++ + + G+ P+ +Y+ +I C+ ++ +E
Sbjct: 924 KVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYL 983
Query: 339 LLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVIFIFNVWMSYAKAIKLTRQL 398
L+ +M + P TY SLI K + A +L ++++ +K +KL R
Sbjct: 984 LMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELL---------SKGLKLDRSF 1034
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/217 (17%), Positives = 91/217 (41%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
+N +L ++ Y + + ++ TG+ PD T LI YC + + ++ ++
Sbjct: 930 WNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMR 989
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
G P T+ +L+ ++ A Q + ++++G +LD+ Y ++ G
Sbjct: 990 NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDS 1049
Query: 160 AALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
A +L++ ++ ++P + +++ S+ +A + S + V Y+++I
Sbjct: 1050 KAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVI 1109
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
+ + L EM + + PD + V A
Sbjct: 1110 DAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRA 1146
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 69/156 (44%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P I + ++ SL K A +L ++ GI P + T + LI Y + A
Sbjct: 436 PDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDT 495
Query: 95 LAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCK 154
+ +L+ G +PD + ++ ++ L + + A + +++ G Y ++I GL K
Sbjct: 496 FSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMK 555
Query: 155 MGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKD 190
++ + +R ++ +E+ ++++ C D
Sbjct: 556 ENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFD 591
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 150/300 (50%), Gaps = 6/300 (2%)
Query: 66 TGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQT 125
+ PD+ +LI+ Y + Q A S+ ++L+ Y P T+ L+K C+ G ++
Sbjct: 171 SSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIER 230
Query: 126 A----LQFHDHVVAQGFRLDQVTYRILINGLCKM-GQTRAALQLMRQIQGQLVKPDVEMY 180
A ++ +H V+ + Y I GL K G T A+ + ++++ KP E Y
Sbjct: 231 AEVVLVEMQNHHVSPK-TIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETY 289
Query: 181 TIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVT 240
++I+ + K ++ LY EM + + P++ TY AL+ F ++A ++ +++
Sbjct: 290 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 349
Query: 241 KNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNK 300
+ PD Y +N L+++ + G A + ++M G +PD +YN ++D Y +
Sbjct: 350 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 409
Query: 301 AKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLID 360
A+ +F M + GIAP + S+ ++++ K + V + ++ EM + PDT +S+++
Sbjct: 410 AEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLN 469
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 165/364 (45%), Gaps = 5/364 (1%)
Query: 16 RNADDAVSIFNRLLRMSP-TPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFT 74
+ D + + +LR S P +I FN ++ + + Y A SL QL + P T
Sbjct: 155 KKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDT 214
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTI---TFTTLMKGLC-LNGQVQTALQFH 130
+LI YC I A VL ++ P TI + ++GL G + A+
Sbjct: 215 YALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVF 274
Query: 131 DHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKD 190
+ + TY ++IN K ++ + +L +++ KP++ YT ++++F ++
Sbjct: 275 QRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFARE 334
Query: 191 KLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTF 250
L A ++ ++ + PDV+ YNAL+ + A ++ M PD ++
Sbjct: 335 GLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASY 394
Query: 251 NILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQ 310
NI+VDA G+ G +A+ V M + G+ P + ++ L+ Y +V K + I M +
Sbjct: 395 NIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSE 454
Query: 311 RGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSH 370
G+ P+ + M+N + + + +LAEM+ D TY+ LI+ K+G +
Sbjct: 455 NGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLER 514
Query: 371 AWEL 374
EL
Sbjct: 515 IEEL 518
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 154/346 (44%), Gaps = 6/346 (1%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N ++A+ +F R+ R P +N ++ K + L ++ P+I T T
Sbjct: 266 NTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYT 325
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
L+N + + A + ++ + G PD + LM+ G A + +
Sbjct: 326 ALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHM 385
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G D+ +Y I+++ + G A + +++ + P ++ + +++ ++ K + V+
Sbjct: 386 GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKC 445
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
+ EM V PD F N+++ + + Q + K+L EM D T+NIL++
Sbjct: 446 EAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINI 505
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
GK G ++ + + + ++ +PD++T+ S + Y K ++F M G AP+
Sbjct: 506 YGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPD 565
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGL 362
+ ++++ ++V++ ++L M VT SSL+ L
Sbjct: 566 GGTAKVLLSACSSEEQVEQVTSVLRTMH------KGVTVSSLVPKL 605
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 127/283 (44%), Gaps = 4/283 (1%)
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
K ++PD I F L+ Q + A + ++ + + TY +LI C G
Sbjct: 170 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIE 229
Query: 160 AALQLMRQIQGQLVKP---DVEMYTIIIHSFCKDKL-VSDAYNLYSEMLARRVLPDVFTY 215
A ++ ++Q V P V +Y I K K +A +++ M R P TY
Sbjct: 230 RAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETY 289
Query: 216 NALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMK 275
N +I + S+ + KL EM + P+ T+ LV+A +EG ++A+ + + +
Sbjct: 290 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 349
Query: 276 QGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDE 335
G++PD+ YN+LM+ Y A +IF+ M G P+ SY+IM++ + +
Sbjct: 350 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 409
Query: 336 ALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
A + EM I P ++ L+ K+ V+ +V ++
Sbjct: 410 AEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM 452
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 146/342 (42%), Gaps = 2/342 (0%)
Query: 31 MSP-TPPIIEFNKILTSLVKMK-HYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQI 88
+SP T + +N + L+K K + AI + ++ P T ++IN Y ++
Sbjct: 243 VSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKS 302
Query: 89 TSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRIL 148
++ + ++ +P+ T+T L+ G + A + + + G D Y L
Sbjct: 303 YMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNAL 362
Query: 149 INGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRV 208
+ + G A ++ +Q +PD Y I++ ++ + L SDA ++ EM +
Sbjct: 363 MESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGI 422
Query: 209 LPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKT 268
P + ++ L+ + + + ++ EM + PD + N +++ G+ G + +
Sbjct: 423 APTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEK 482
Query: 269 VLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLC 328
+LA M DI TYN L++ Y + + +++F + ++ P+V +++ I
Sbjct: 483 ILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYS 542
Query: 329 KTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSH 370
+ K + L + EM PD T L+ +V
Sbjct: 543 RKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQ 584
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 150/300 (50%), Gaps = 6/300 (2%)
Query: 66 TGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQT 125
+ PD+ +LI+ Y + Q A S+ ++L+ Y P T+ L+K C+ G ++
Sbjct: 149 SSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIER 208
Query: 126 A----LQFHDHVVAQGFRLDQVTYRILINGLCKM-GQTRAALQLMRQIQGQLVKPDVEMY 180
A ++ +H V+ + Y I GL K G T A+ + ++++ KP E Y
Sbjct: 209 AEVVLVEMQNHHVSPK-TIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETY 267
Query: 181 TIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVT 240
++I+ + K ++ LY EM + + P++ TY AL+ F ++A ++ +++
Sbjct: 268 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 327
Query: 241 KNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNK 300
+ PD Y +N L+++ + G A + ++M G +PD +YN ++D Y +
Sbjct: 328 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 387
Query: 301 AKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLID 360
A+ +F M + GIAP + S+ ++++ K + V + ++ EM + PDT +S+++
Sbjct: 388 AEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLN 447
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 165/364 (45%), Gaps = 5/364 (1%)
Query: 16 RNADDAVSIFNRLLRMSP-TPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFT 74
+ D + + +LR S P +I FN ++ + + Y A SL QL + P T
Sbjct: 133 KKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDT 192
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTI---TFTTLMKGLC-LNGQVQTALQFH 130
+LI YC I A VL ++ P TI + ++GL G + A+
Sbjct: 193 YALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVF 252
Query: 131 DHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKD 190
+ + TY ++IN K ++ + +L +++ KP++ YT ++++F ++
Sbjct: 253 QRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFARE 312
Query: 191 KLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTF 250
L A ++ ++ + PDV+ YNAL+ + A ++ M PD ++
Sbjct: 313 GLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASY 372
Query: 251 NILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQ 310
NI+VDA G+ G +A+ V M + G+ P + ++ L+ Y +V K + I M +
Sbjct: 373 NIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSE 432
Query: 311 RGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSH 370
G+ P+ + M+N + + + +LAEM+ D TY+ LI+ K+G +
Sbjct: 433 NGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLER 492
Query: 371 AWEL 374
EL
Sbjct: 493 IEEL 496
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 154/346 (44%), Gaps = 6/346 (1%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N ++A+ +F R+ R P +N ++ K + L ++ P+I T T
Sbjct: 244 NTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYT 303
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
L+N + + A + ++ + G PD + LM+ G A + +
Sbjct: 304 ALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHM 363
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G D+ +Y I+++ + G A + +++ + P ++ + +++ ++ K + V+
Sbjct: 364 GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKC 423
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
+ EM V PD F N+++ + + Q + K+L EM D T+NIL++
Sbjct: 424 EAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINI 483
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
GK G ++ + + + ++ +PD++T+ S + Y K ++F M G AP+
Sbjct: 484 YGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPD 543
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGL 362
+ ++++ ++V++ ++L M VT SSL+ L
Sbjct: 544 GGTAKVLLSACSSEEQVEQVTSVLRTMH------KGVTVSSLVPKL 583
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 127/283 (44%), Gaps = 4/283 (1%)
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
K ++PD I F L+ Q + A + ++ + + TY +LI C G
Sbjct: 148 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIE 207
Query: 160 AALQLMRQIQGQLVKP---DVEMYTIIIHSFCKDKL-VSDAYNLYSEMLARRVLPDVFTY 215
A ++ ++Q V P V +Y I K K +A +++ M R P TY
Sbjct: 208 RAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETY 267
Query: 216 NALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMK 275
N +I + S+ + KL EM + P+ T+ LV+A +EG ++A+ + + +
Sbjct: 268 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 327
Query: 276 QGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDE 335
G++PD+ YN+LM+ Y A +IF+ M G P+ SY+IM++ + +
Sbjct: 328 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 387
Query: 336 ALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
A + EM I P ++ L+ K+ V+ +V ++
Sbjct: 388 AEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM 430
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 141/332 (42%), Gaps = 1/332 (0%)
Query: 40 FNKILTSLVKMK-HYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKI 98
+N + L+K K + AI + ++ P T ++IN Y ++ ++ + ++
Sbjct: 231 YNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM 290
Query: 99 LKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQT 158
+P+ T+T L+ G + A + + + G D Y L+ + G
Sbjct: 291 RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYP 350
Query: 159 RAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNAL 218
A ++ +Q +PD Y I++ ++ + L SDA ++ EM + P + ++ L
Sbjct: 351 YGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLL 410
Query: 219 IYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGV 278
+ + + + ++ EM + PD + N +++ G+ G + + +LA M
Sbjct: 411 LSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPC 470
Query: 279 KPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALN 338
DI TYN L++ Y + + +++F + ++ P+V +++ I + K + L
Sbjct: 471 TADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLE 530
Query: 339 LLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSH 370
+ EM PD T L+ +V
Sbjct: 531 VFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQ 562
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 175/393 (44%), Gaps = 35/393 (8%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGI-SPDIFTLTI--------------------- 77
+N +++ L K + + T +S+ ++ G+ + + FT+ +
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKK 257
Query: 78 --------LINCYCN---QAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA 126
INC + +A++ VL LK + P+ +T+T L+ G C + A
Sbjct: 258 YKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEA 317
Query: 127 LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS 186
+ + ++ G + D V + +++ GL + + A++L ++ + P+V YTI+I
Sbjct: 318 ARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRD 377
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
FCK + A + +M+ + PD Y LI GF +L +LL EM K PD
Sbjct: 378 FCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPD 437
Query: 247 AYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFN 306
T+N L+ + + + + M++ ++P I T+N +M Y + + +++
Sbjct: 438 GKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWD 497
Query: 307 SMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
M ++GI P+ +SY+++I GL K EA L EM K + + Y+ + G
Sbjct: 498 EMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGG 557
Query: 367 RVSHAWELVDDVIFI--FNVWMSYAKAIKLTRQ 397
+ EL F F +A+ ++TR+
Sbjct: 558 QPEIFEELAQRAKFSGKFAAAEIFARWAQMTRR 590
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 136/293 (46%), Gaps = 5/293 (1%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A +F++L + TP ++ + +L ++++ A + + + G+ PDI +++
Sbjct: 282 EAQVLFDKL-KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVML 340
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ + A + + +G P+ ++T +++ C ++TA+++ D +V G +
Sbjct: 341 EGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 400
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
D Y LI G + +L++++Q + PD + Y +I K+ +
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 460
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
Y++M+ + P + T+N ++ + + + + DEM+ K I PD ++ +L+ L
Sbjct: 461 YNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLIS 520
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG 312
EG +EA L M+ +G+K +I YN + +IF + QR
Sbjct: 521 EGKSREACRYLEEMLDKGMKTPLIDYNKFAADF----HRGGQPEIFEELAQRA 569
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 130/277 (46%), Gaps = 3/277 (1%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
AV IF + + + N +L SL + K A L +L +P++ T T+L+N
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLN 306
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
+C + A + ++ G +PD + +++GL + + A++ + ++G
Sbjct: 307 GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCP 366
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
+ +Y I+I CK A++ + ++PD +YT +I F K + Y L
Sbjct: 367 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 426
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
EM + PD TYNALI + T++ ++M+ I P +TFN+++ +
Sbjct: 427 KEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVA 486
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSE 297
N + + V M+K+G+ PD +Y L+ G L+SE
Sbjct: 487 RNYEMGRAVWDEMIKKGICPDDNSYTVLIRG--LISE 521
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 82/161 (50%), Gaps = 2/161 (1%)
Query: 214 TYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVM 273
TYN+++ Q + +L+EM TK + TF I + A K+A + +M
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELM 255
Query: 274 MKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKV 333
K K + T N L+D +A+ +F+ + +R PN+ +Y++++NG C+ + +
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNL 314
Query: 334 DEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
EA + +M + PD V ++ +++GL +S + S A +L
Sbjct: 315 IEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL 355
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 175/393 (44%), Gaps = 35/393 (8%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGI-SPDIFTLTI--------------------- 77
+N +++ L K + + T +S+ ++ G+ + + FT+ +
Sbjct: 197 YNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKK 256
Query: 78 --------LINCYCN---QAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA 126
INC + +A++ VL LK + P+ +T+T L+ G C + A
Sbjct: 257 YKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEA 316
Query: 127 LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS 186
+ + ++ G + D V + +++ GL + + A++L ++ + P+V YTI+I
Sbjct: 317 ARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRD 376
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
FCK + A + +M+ + PD Y LI GF +L +LL EM K PD
Sbjct: 377 FCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPD 436
Query: 247 AYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFN 306
T+N L+ + + + + M++ ++P I T+N +M Y + + +++
Sbjct: 437 GKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWD 496
Query: 307 SMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
M ++GI P+ +SY+++I GL K EA L EM K + + Y+ + G
Sbjct: 497 EMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGG 556
Query: 367 RVSHAWELVDDVIFI--FNVWMSYAKAIKLTRQ 397
+ EL F F +A+ ++TR+
Sbjct: 557 QPEIFEELAQRAKFSGKFAAAEIFARWAQMTRR 589
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 136/293 (46%), Gaps = 5/293 (1%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A +F++L + TP ++ + +L ++++ A + + + G+ PDI +++
Sbjct: 281 EAQVLFDKL-KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVML 339
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ + A + + +G P+ ++T +++ C ++TA+++ D +V G +
Sbjct: 340 EGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 399
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
D Y LI G + +L++++Q + PD + Y +I K+ +
Sbjct: 400 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 459
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
Y++M+ + P + T+N ++ + + + + DEM+ K I PD ++ +L+ L
Sbjct: 460 YNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLIS 519
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG 312
EG +EA L M+ +G+K +I YN + +IF + QR
Sbjct: 520 EGKSREACRYLEEMLDKGMKTPLIDYNKFAADF----HRGGQPEIFEELAQRA 568
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 130/277 (46%), Gaps = 3/277 (1%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
AV IF + + + N +L SL + K A L +L +P++ T T+L+N
Sbjct: 247 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLN 305
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
+C + A + ++ G +PD + +++GL + + A++ + ++G
Sbjct: 306 GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCP 365
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
+ +Y I+I CK A++ + ++PD +YT +I F K + Y L
Sbjct: 366 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 425
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
EM + PD TYNALI + T++ ++M+ I P +TFN+++ +
Sbjct: 426 KEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVA 485
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSE 297
N + + V M+K+G+ PD +Y L+ G L+SE
Sbjct: 486 RNYEMGRAVWDEMIKKGICPDDNSYTVLIRG--LISE 520
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 118/245 (48%), Gaps = 6/245 (2%)
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQI--QGQLVKPDVEMYTIIIHSFCKDKLV 193
QGF D TY +++ L K Q + ++ ++ +G L +E +TI + +F K
Sbjct: 188 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT---METFTIAMKAFAAAKER 244
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
A ++ M + V T N L+ KEA L D++ + P+ T+ +L
Sbjct: 245 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVL 303
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
++ + N+ EA + M+ G+KPDI+ +N +++G + + A +F+ M +G
Sbjct: 304 LNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGP 363
Query: 314 APNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWE 373
PNV SY+IMI CK ++ A+ +M + PD Y+ LI G ++ +E
Sbjct: 364 CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 423
Query: 374 LVDDV 378
L+ ++
Sbjct: 424 LLKEM 428
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 101/204 (49%), Gaps = 2/204 (0%)
Query: 176 DVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLL 235
D Y ++ K + ++ EM + +L + T+ + F + K+A +
Sbjct: 193 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIF 251
Query: 236 DEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLV 295
+ M T N L+D+LG+ KEA+ VL +K+ P+++TY L++G+C V
Sbjct: 252 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ-VLFDKLKERFTPNMMTYTVLLNGWCRV 310
Query: 296 SEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTY 355
+ +A I+N M G+ P++ ++++M+ GL ++ K +A+ L M K P+ +Y
Sbjct: 311 RNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSY 370
Query: 356 SSLIDGLCKSGRVSHAWELVDDVI 379
+ +I CK + A E DD++
Sbjct: 371 TIMIRDFCKQSSMETAIEYFDDMV 394
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 147/306 (48%), Gaps = 6/306 (1%)
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
+L+ + + + ++ +++K GY TF L +C G+ A + +
Sbjct: 157 LLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLL---ICTCGEAGLARDVVEQFIKS 213
Query: 137 ---GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLV 193
+R + +Y +++ L + Q + + Q+ PDV Y I++ + +
Sbjct: 214 KTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKT 273
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
Y L EM+ PD++TYN L++ ++ A LL+ M + P F L
Sbjct: 274 DRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTL 333
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
+D L + G ++ K + +K G PD++ Y ++ GY E+ KA+++F M ++G
Sbjct: 334 IDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQ 393
Query: 314 APNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWE 373
PNV +Y+ MI G C K EA LL EM+ + P+ V YS+L++ L +G+V A E
Sbjct: 394 LPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHE 453
Query: 374 LVDDVI 379
+V D++
Sbjct: 454 VVKDMV 459
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 127/260 (48%)
Query: 18 ADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTI 77
A D V F + + P +N IL SL+ +K Y + Q+ G +PD+ T I
Sbjct: 203 ARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNI 262
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
++ + + +L +++K G+ PD T+ L+ L + AL +H+ G
Sbjct: 263 VMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVG 322
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
+ + LI+GL + G+ A M + PDV YT++I + + A
Sbjct: 323 VEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAE 382
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
++ EM + LP+VFTYN++I GFC+ + KEA LL EM ++ +P+ ++ LV+ L
Sbjct: 383 EMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNL 442
Query: 258 GKEGNVKEAKTVLAVMMKQG 277
G V EA V+ M+++G
Sbjct: 443 KNAGKVLEAHEVVKDMVEKG 462
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 104/219 (47%)
Query: 94 VLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLC 153
V ++L+ G+ PD +T+ +M G+ + D +V GF D TY IL++ L
Sbjct: 244 VYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLA 303
Query: 154 KMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVF 213
+ AAL L+ ++ V+P V +T +I + + E + PDV
Sbjct: 304 TGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVV 363
Query: 214 TYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVM 273
Y +I G+ +L++A ++ EM K P+ +T+N ++ G KEA +L M
Sbjct: 364 CYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEM 423
Query: 274 MKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG 312
+G P+ + Y++L++ +V +A ++ M ++G
Sbjct: 424 ESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 35/200 (17%)
Query: 215 YNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEG------------- 261
Y+ L+ F + K +L+DEM+ A TFN+L+ G+ G
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSK 214
Query: 262 -------------------NVKEAKTVLAV---MMKQGVKPDIITYNSLMDGYCLVSEVN 299
VK+ K + V M++ G PD++TYN +M + + +
Sbjct: 215 TFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTD 274
Query: 300 KAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLI 359
+ + + M + G +P++++Y+I+++ L K ALNLL M + P + +++LI
Sbjct: 275 RLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLI 334
Query: 360 DGLCKSGRVSHAWELVDDVI 379
DGL ++G++ +D+ +
Sbjct: 335 DGLSRAGKLEACKYFMDETV 354
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 145/303 (47%), Gaps = 6/303 (1%)
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
+LI Y A VL+ + K G P+ I++T LM+ G+ A + +
Sbjct: 144 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 203
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQI---QGQLVKPDVEMYTIIIHSFCKDKLV 193
G +TY+I++ + + + A ++ + + +KPD +MY ++I+ + K
Sbjct: 204 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
A ++S M+ + V TYN+L+ + KE +K+ D+M +I PD ++ +L
Sbjct: 264 EKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSYALL 320
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
+ A G+ +EA +V M+ GV+P YN L+D + + V +AK +F SM + I
Sbjct: 321 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 380
Query: 314 APNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWE 373
P++ SY+ M++ ++ A + P+ VTY +LI G K+ V E
Sbjct: 381 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMME 440
Query: 374 LVD 376
+ +
Sbjct: 441 VYE 443
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 157/340 (46%), Gaps = 8/340 (2%)
Query: 38 IEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAK 97
I+F ++T+ K+ ++ A + L G +P++ + T L+ Y + +A ++ +
Sbjct: 140 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 199
Query: 98 ILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG---FRLDQVTYRILINGLCK 154
+ G P IT+ ++K + + A + + ++ + + DQ Y ++I K
Sbjct: 200 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 259
Query: 155 MGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFT 214
G A ++ + G+ V Y ++ K VS +Y +M + PDV +
Sbjct: 260 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVS 316
Query: 215 YNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMM 274
Y LI + + +EA + +EM+ + P +NIL+DA G V++AKTV M
Sbjct: 317 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 376
Query: 275 KQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVD 334
+ + PD+ +Y +++ Y S++ A+ F + G PN+ +Y +I G K V+
Sbjct: 377 RDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVE 436
Query: 335 EALNLLAEMDCKNIIPDTVTYSSLID--GLCKSGRVSHAW 372
+ + + +M I + ++++D G CK+ + W
Sbjct: 437 KMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGW 476
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 157/362 (43%), Gaps = 6/362 (1%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N + A + + L +M TP +I + ++ S + A ++ ++ +G P T
Sbjct: 154 NFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQ 213
Query: 77 ILINCYCNQAQITSAFSVLAKIL---KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHV 133
I++ + + A V +L K +PD + ++ G + A + +
Sbjct: 214 IILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSM 273
Query: 134 VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLV 193
V +G VTY L++ + ++ Q+Q ++PDV Y ++I ++ + +
Sbjct: 274 VGKGVPQSTVTYNSLMSFETSY---KEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARRE 330
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
+A +++ EML V P YN L+ F I +++A + M I PD +++ +
Sbjct: 331 EEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTM 390
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
+ A +++ A+ + G +P+I+TY +L+ GY ++V K +++ M GI
Sbjct: 391 LSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGI 450
Query: 314 APNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWE 373
N + +++ + K AL EM+ + PD + L+ + A E
Sbjct: 451 KANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKE 510
Query: 374 LV 375
L
Sbjct: 511 LT 512
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 118/237 (49%), Gaps = 6/237 (2%)
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
+ ++ + +LI K+G A +++ + P+V YT ++ S+ + ++A
Sbjct: 135 WNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAE 194
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKN---IHPDAYTFNILV 254
++ M + P TY ++ F + KEA ++ + ++ + + PD +++++
Sbjct: 195 AIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMI 254
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
K GN ++A+ V + M+ +GV +TYNSLM EV+K I++ M + I
Sbjct: 255 YMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQ 311
Query: 315 PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
P+V SY+++I + ++ +EAL++ EM + P Y+ L+D SG V A
Sbjct: 312 PDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQA 368
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 98/226 (43%)
Query: 9 NSLPPSIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGI 68
NSL + + I++++ R P ++ + ++ + + + A+S+ ++ G+
Sbjct: 286 NSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 345
Query: 69 SPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQ 128
P IL++ + + A +V + + PD ++TT++ ++ A +
Sbjct: 346 RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEK 405
Query: 129 FHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFC 188
F + GF + VTY LI G K +++ +++ +K + + T I+ +
Sbjct: 406 FFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASG 465
Query: 189 KDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKL 234
+ K A Y EM + V PD N L+ +L+EA +L
Sbjct: 466 RCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 83/173 (47%), Gaps = 6/173 (3%)
Query: 210 PDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTV 269
P+V +Y AL+ + + A + M + P A T+ I++ + KEA+ V
Sbjct: 172 PNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEV 231
Query: 270 LAVMM---KQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMING 326
++ K +KPD Y+ ++ Y KA+ +F+SM +G+ + +Y+ +++
Sbjct: 232 FETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF 291
Query: 327 LCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
K+V + + +M +I PD V+Y+ LI ++ R A + ++++
Sbjct: 292 ETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEML 341
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/261 (17%), Positives = 101/261 (38%), Gaps = 13/261 (4%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N + A +F+ ++ + +N +++ Y + Q+ + I PD+ +
Sbjct: 262 NYEKARKVFSSMVGKGVPQSTVTYNSLMSFET---SYKEVSKIYDQMQRSDIQPDVVSYA 318
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
+LI Y + A SV ++L G RP + L+ ++G V+ A V +
Sbjct: 319 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQA-----KTVFK 373
Query: 137 GFRLDQV-----TYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDK 191
R D++ +Y +++ A + ++I+ +P++ Y +I + K
Sbjct: 374 SMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAN 433
Query: 192 LVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFN 251
V +Y +M + + ++ A EM + + PD N
Sbjct: 434 DVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKN 493
Query: 252 ILVDALGKEGNVKEAKTVLAV 272
+L+ + ++EAK + +
Sbjct: 494 VLLSLASTQDELEEAKELTGI 514
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 156/330 (47%), Gaps = 6/330 (1%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTG---ISPDIFTLTILINCYCNQAQITSAFSVLA 96
+ ++ L KM+ + L ++ I P++F +L+ + + + A VL
Sbjct: 150 YKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFV--VLVQRFASADMVKKAIEVLD 207
Query: 97 KILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMG 156
++ K G+ PD F L+ LC +G V+ A + + + + F ++ + L+ G C++G
Sbjct: 208 EMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVG 266
Query: 157 QTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYN 216
+ A ++ Q+ +PD+ YT ++ + ++DAY+L +M R P+ Y
Sbjct: 267 KMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYT 326
Query: 217 ALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQ 276
LI C V +++EA K+ EM D T+ LV K G + + VL M+K+
Sbjct: 327 VLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKK 386
Query: 277 GVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEA 336
G+ P +TY +M + + ++ M Q P++ Y+++I CK +V EA
Sbjct: 387 GLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEA 446
Query: 337 LNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
+ L EM+ + P T+ +I+GL G
Sbjct: 447 VRLWNEMEENGLSPGVDTFVIMINGLASQG 476
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 125/238 (52%), Gaps = 6/238 (2%)
Query: 145 YRILINGLCKMGQTRAALQL---MRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYS 201
Y+ ++ L KM Q A L MR+ QL++P E++ +++ F +V A +
Sbjct: 150 YKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEP--ELFVVLVQRFASADMVKKAIEVLD 207
Query: 202 EMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEG 261
EM PD + + L+ C +K+A KL ++M + + F L+ + G
Sbjct: 208 EMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVG 266
Query: 262 NVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYS 321
+ EAK VL M + G +PDI+ Y +L+ GY ++ A D+ M +RG PN + Y+
Sbjct: 267 KMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYT 326
Query: 322 IMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
++I LCK +++EA+ + EM+ D VTY++L+ G CK G++ + ++DD+I
Sbjct: 327 VLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMI 384
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 141/288 (48%), Gaps = 1/288 (0%)
Query: 56 AISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMK 115
AI + ++ G PD + L++ C + A + + R + + FT+L+
Sbjct: 202 AIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLY 260
Query: 116 GLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKP 175
G C G++ A + GF D V Y L++G G+ A L+R ++ + +P
Sbjct: 261 GWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEP 320
Query: 176 DVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLL 235
+ YT++I + CK + +A ++ EM DV TY AL+ GFC ++ + +L
Sbjct: 321 NANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVL 380
Query: 236 DEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLV 295
D+M+ K + P T+ ++ A K+ + +E ++ M + PDI YN ++ C +
Sbjct: 381 DDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKL 440
Query: 296 SEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM 343
EV +A ++N M + G++P V ++ IMINGL + EA + EM
Sbjct: 441 GEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEM 488
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 167/396 (42%), Gaps = 39/396 (9%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A+ + + + + P F +L +L K A L + ++ T L+
Sbjct: 202 AIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLY 260
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
+C ++ A VL ++ + G+ PD + +T L+ G G++ A + +GF
Sbjct: 261 GWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEP 320
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
+ Y +LI LCK+ + A+++ +++ + DV YT ++ FCK + Y +
Sbjct: 321 NANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVL 380
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
+M+ + ++P TY ++ +E +L+++M HPD +N+++ K
Sbjct: 381 DDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKL 440
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITY----NSLMDGYCLVS-------------------- 296
G VKEA + M + G+ P + T+ N L CL+
Sbjct: 441 GEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYG 500
Query: 297 -------------EVNKAKDIFNSMPQRGIAP-NVHSYSIMINGLCKTKKVDEALNLLAE 342
++ AKD+++ + +G NV S++I I+ L EA + E
Sbjct: 501 TLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIE 560
Query: 343 MDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
M + +P T++ L+ GL K A E+ + V
Sbjct: 561 MIEMDFMPQPDTFAKLMKGLKKLYNREFAGEITEKV 596
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 133/269 (49%), Gaps = 1/269 (0%)
Query: 110 FTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQ 169
F L++ V+ A++ D + GF D+ + L++ LCK G + A +L ++
Sbjct: 186 FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR 245
Query: 170 GQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLK 229
+ ++ +T +++ +C+ + +A + +M PD+ Y L+ G+ ++
Sbjct: 246 MRF-PVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMA 304
Query: 230 EATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLM 289
+A LL +M + P+A + +L+ AL K ++EA V M + + D++TY +L+
Sbjct: 305 DAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALV 364
Query: 290 DGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNII 349
G+C +++K + + M ++G+ P+ +Y ++ K + +E L L+ +M
Sbjct: 365 SGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYH 424
Query: 350 PDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
PD Y+ +I CK G V A L +++
Sbjct: 425 PDIGIYNVVIRLACKLGEVKEAVRLWNEM 453
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 121/276 (43%), Gaps = 5/276 (1%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
DA + + R P + ++ +L K+ A+ + +++ D+ T T L+
Sbjct: 305 DAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALV 364
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ +C +I + VL ++K+G P +T+ +M + L+ + + +
Sbjct: 365 SGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYH 424
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
D Y ++I CK+G+ + A++L +++ + P V+ + I+I+ + +A +
Sbjct: 425 PDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDH 484
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIV---SQLKEATKLLDEMVTKNI-HPDAYTFNILVD 255
+ EM+ R + V Y L V +L+ A + + +K + ++ I +
Sbjct: 485 FKEMVTRGLF-SVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIH 543
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDG 291
AL +G KEA + M++ P T+ LM G
Sbjct: 544 ALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKG 579
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 154/336 (45%), Gaps = 3/336 (0%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
F I + + AI H+++ G + +++ + A V K+
Sbjct: 165 FALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMK 224
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
K+ + PD ++T L++G + + + + +GF D V Y I+IN CK +
Sbjct: 225 KKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYE 284
Query: 160 AALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
A++ +++ + KP ++ +I+ +K ++DA + + + TYNAL+
Sbjct: 285 EAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALV 344
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVK 279
+C ++++A K +DEM K + P+A T++I++ L + KEA V M +
Sbjct: 345 GAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCE 401
Query: 280 PDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNL 339
P + TY ++ +C ++ A I++ M +G+ P +H +S +I LC K+DEA
Sbjct: 402 PTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEY 461
Query: 340 LAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
EM I P +S L L GR +LV
Sbjct: 462 FNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLV 497
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 159/341 (46%), Gaps = 6/341 (1%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGI-SPDIFTLTILINCYCNQAQITSAFSVLAKI 98
+N ++ SL K+K + SL + + S + F L + Y ++ A K+
Sbjct: 131 YNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFAL--ISRRYARARKVKEAIGAFHKM 188
Query: 99 LKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQT 158
+ G++ ++ F ++ L + V A + D + + F D +Y IL+ G +
Sbjct: 189 EEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNL 248
Query: 159 RAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNAL 218
++ R+++ + +PDV Y III++ CK K +A ++EM R P + +L
Sbjct: 249 LRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSL 308
Query: 219 IYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGV 278
I G +L +A + + + +A T+N LV A +++A + M +GV
Sbjct: 309 INGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGV 368
Query: 279 KPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALN 338
P+ TY+ ++ + +A +++ +M P V +Y IM+ C +++D A+
Sbjct: 369 GPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIK 425
Query: 339 LLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+ EM K ++P +SSLI LC ++ A E ++++
Sbjct: 426 IWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEML 466
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 150/329 (45%), Gaps = 3/329 (0%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
R +A+ F+++ +FN++L +L K ++ A + ++ PDI +
Sbjct: 176 RKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSY 235
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
TIL+ + + + V ++ G+ PD + + ++ C + + A++F + +
Sbjct: 236 TILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQ 295
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
+ + + LINGL + AL+ + + + Y ++ ++C + + D
Sbjct: 296 RNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMED 355
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
AY EM + V P+ TY+ +++ + + KEA ++ M + P T+ I+V
Sbjct: 356 AYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVR 412
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
+ + A + M +GV P + ++SL+ C +++++A + FN M GI P
Sbjct: 413 MFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRP 472
Query: 316 NVHSYSIMINGLCKTKKVDEALNLLAEMD 344
H +S + L + D+ +L+ +MD
Sbjct: 473 PGHMFSRLKQTLLDEGRKDKVTDLVVKMD 501
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 124/275 (45%), Gaps = 1/275 (0%)
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
++G++ T + L++ L Q + D + A+ L + T+ ++ + + +
Sbjct: 121 QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKL-LSKETFALISRRYARARKVK 179
Query: 160 AALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
A+ +++ K + + ++ + K + V DA ++ +M +R PD+ +Y L+
Sbjct: 180 EAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILL 239
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVK 279
G+ L ++ EM + PD + I+++A K +EA M ++ K
Sbjct: 240 EGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCK 299
Query: 280 PDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNL 339
P + SL++G ++N A + F G +Y+ ++ C ++++++A
Sbjct: 300 PSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKT 359
Query: 340 LAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
+ EM K + P+ TY ++ L + R A+E+
Sbjct: 360 VDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEV 394
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 145/303 (47%), Gaps = 6/303 (1%)
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
+LI Y A VL+ + K G P+ I++T LM+ G+ A + +
Sbjct: 151 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 210
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQI---QGQLVKPDVEMYTIIIHSFCKDKLV 193
G +TY+I++ + + + A ++ + + +KPD +MY ++I+ + K
Sbjct: 211 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 270
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
A ++S M+ + V TYN+L+ + KE +K+ D+M +I PD ++ +L
Sbjct: 271 EKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSYALL 327
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
+ A G+ +EA +V M+ GV+P YN L+D + + V +AK +F SM + I
Sbjct: 328 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 387
Query: 314 APNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWE 373
P++ SY+ M++ ++ A + P+ VTY +LI G K+ V E
Sbjct: 388 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMME 447
Query: 374 LVD 376
+ +
Sbjct: 448 VYE 450
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 157/340 (46%), Gaps = 8/340 (2%)
Query: 38 IEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAK 97
I+F ++T+ K+ ++ A + L G +P++ + T L+ Y + +A ++ +
Sbjct: 147 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 206
Query: 98 ILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG---FRLDQVTYRILINGLCK 154
+ G P IT+ ++K + + A + + ++ + + DQ Y ++I K
Sbjct: 207 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 266
Query: 155 MGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFT 214
G A ++ + G+ V Y ++ K VS +Y +M + PDV +
Sbjct: 267 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVS 323
Query: 215 YNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMM 274
Y LI + + +EA + +EM+ + P +NIL+DA G V++AKTV M
Sbjct: 324 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 383
Query: 275 KQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVD 334
+ + PD+ +Y +++ Y S++ A+ F + G PN+ +Y +I G K V+
Sbjct: 384 RDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVE 443
Query: 335 EALNLLAEMDCKNIIPDTVTYSSLID--GLCKSGRVSHAW 372
+ + + +M I + ++++D G CK+ + W
Sbjct: 444 KMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGW 483
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 157/361 (43%), Gaps = 6/361 (1%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N + A + + L +M TP +I + ++ S + A ++ ++ +G P T
Sbjct: 161 NFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQ 220
Query: 77 ILINCYCNQAQITSAFSVLAKIL---KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHV 133
I++ + + A V +L K +PD + ++ G + A + +
Sbjct: 221 IILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSM 280
Query: 134 VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLV 193
V +G VTY L++ + ++ Q+Q ++PDV Y ++I ++ + +
Sbjct: 281 VGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVSYALLIKAYGRARRE 337
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
+A +++ EML V P YN L+ F I +++A + M I PD +++ +
Sbjct: 338 EEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTM 397
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
+ A +++ A+ + G +P+I+TY +L+ GY ++V K +++ M GI
Sbjct: 398 LSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGI 457
Query: 314 APNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWE 373
N + +++ + K AL EM+ + PD + L+ + A E
Sbjct: 458 KANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKE 517
Query: 374 L 374
L
Sbjct: 518 L 518
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 118/237 (49%), Gaps = 6/237 (2%)
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
+ ++ + +LI K+G A +++ + P+V YT ++ S+ + ++A
Sbjct: 142 WNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAE 201
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKN---IHPDAYTFNILV 254
++ M + P TY ++ F + KEA ++ + ++ + + PD +++++
Sbjct: 202 AIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMI 261
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
K GN ++A+ V + M+ +GV +TYNSLM EV+K I++ M + I
Sbjct: 262 YMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQ 318
Query: 315 PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
P+V SY+++I + ++ +EAL++ EM + P Y+ L+D SG V A
Sbjct: 319 PDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQA 375
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 98/226 (43%)
Query: 9 NSLPPSIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGI 68
NSL + + I++++ R P ++ + ++ + + + A+S+ ++ G+
Sbjct: 293 NSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 352
Query: 69 SPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQ 128
P IL++ + + A +V + + PD ++TT++ ++ A +
Sbjct: 353 RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEK 412
Query: 129 FHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFC 188
F + GF + VTY LI G K +++ +++ +K + + T I+ +
Sbjct: 413 FFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASG 472
Query: 189 KDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKL 234
+ K A Y EM + V PD N L+ +L+EA +L
Sbjct: 473 RCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 83/173 (47%), Gaps = 6/173 (3%)
Query: 210 PDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTV 269
P+V +Y AL+ + + A + M + P A T+ I++ + KEA+ V
Sbjct: 179 PNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEV 238
Query: 270 LAVMM---KQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMING 326
++ K +KPD Y+ ++ Y KA+ +F+SM +G+ + +Y+ +++
Sbjct: 239 FETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF 298
Query: 327 LCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
K+V + + +M +I PD V+Y+ LI ++ R A + ++++
Sbjct: 299 ETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEML 348
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/261 (17%), Positives = 101/261 (38%), Gaps = 13/261 (4%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N + A +F+ ++ + +N +++ Y + Q+ + I PD+ +
Sbjct: 269 NYEKARKVFSSMVGKGVPQSTVTYNSLMSFET---SYKEVSKIYDQMQRSDIQPDVVSYA 325
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
+LI Y + A SV ++L G RP + L+ ++G V+ A V +
Sbjct: 326 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQA-----KTVFK 380
Query: 137 GFRLDQV-----TYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDK 191
R D++ +Y +++ A + ++I+ +P++ Y +I + K
Sbjct: 381 SMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAN 440
Query: 192 LVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFN 251
V +Y +M + + ++ A EM + + PD N
Sbjct: 441 DVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKN 500
Query: 252 ILVDALGKEGNVKEAKTVLAV 272
+L+ + ++EAK + +
Sbjct: 501 VLLSLASTQDELEEAKELTGI 521
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 138/293 (47%), Gaps = 12/293 (4%)
Query: 13 PSIRNA------DDAVSIFNRLLRMSPTPPIIEF-NKILTSLVKMKHYPTAISLSHQL-- 63
PS+RN DA S+FN + S P ++F N +L S + + L +
Sbjct: 54 PSLRNPFKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILK 113
Query: 64 DFTGISPDIFTLTILIN--CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNG 121
P T IL++ C + I++ VL ++ G PD +T ++ LC G
Sbjct: 114 SQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETG 173
Query: 122 QVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQL-VKPDVEMY 180
+V A + + D TY L+ LCK + + +++ VKPD+ +
Sbjct: 174 RVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSF 233
Query: 181 TIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVT 240
TI+I + C K + +A L S++ PD F YN ++ GFC +S+ EA + +M
Sbjct: 234 TILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKE 293
Query: 241 KNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYC 293
+ + PD T+N L+ L K G V+EA+ L M+ G +PD TY SLM+G C
Sbjct: 294 EGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 131/249 (52%), Gaps = 5/249 (2%)
Query: 123 VQTALQFHDHVVAQ--GFRLDQVTYRILINGLCKMGQTRAA--LQLMRQIQGQLVKPDVE 178
V ++ H++ FR + T+ IL++ C+ + + +++ + ++PD
Sbjct: 101 VNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQV 160
Query: 179 MYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEM 238
I + S C+ V +A +L E+ + PD +TYN L+ C L + +DEM
Sbjct: 161 TTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEM 220
Query: 239 VTK-NIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSE 297
++ PD +F IL+D + N++EA +++ + G KPD YN++M G+C +S+
Sbjct: 221 RDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSK 280
Query: 298 VNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSS 357
++A ++ M + G+ P+ +Y+ +I GL K +V+EA L M PDT TY+S
Sbjct: 281 GSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTS 340
Query: 358 LIDGLCKSG 366
L++G+C+ G
Sbjct: 341 LMNGMCRKG 349
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 101/201 (50%), Gaps = 3/201 (1%)
Query: 174 KPDVEMYTIIIHSFCK--DKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEA 231
+P + I++ C+ D +S+ + + + M+ + PD T + + C ++ EA
Sbjct: 119 RPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEA 178
Query: 232 TKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQ-GVKPDIITYNSLMD 290
L+ E+ K+ PD YT+N L+ L K ++ + M VKPD++++ L+D
Sbjct: 179 KDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILID 238
Query: 291 GYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIP 350
C + +A + + + G P+ Y+ ++ G C K EA+ + +M + + P
Sbjct: 239 NVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEP 298
Query: 351 DTVTYSSLIDGLCKSGRVSHA 371
D +TY++LI GL K+GRV A
Sbjct: 299 DQITYNTLIFGLSKAGRVEEA 319
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 1/172 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQL-DFTGISPDIFTLTI 77
D+A + L P +N +L L K K ++ D + PD+ + TI
Sbjct: 176 DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTI 235
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
LI+ CN + A +++K+ G++PD + T+MKG C + A+ + + +G
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCK 189
DQ+TY LI GL K G+ A ++ + +PD YT +++ C+
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 104/208 (50%), Gaps = 14/208 (6%)
Query: 193 VSDAYNLYSEMLARRVLP-DVFTYNALIYGFCIVSQLKEATKLLDEMVTK--NIHPDAYT 249
+SDA +L++ + A +P D+ +N+++ + ++ + + KL ++ N P T
Sbjct: 65 LSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRST 124
Query: 250 FNILVD--ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNS 307
F IL+ + ++ VL +M+ G++PD +T + + C V++AKD+
Sbjct: 125 FLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKE 184
Query: 308 MPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM-DCKNIIPDTVTYSSLIDGLCKSG 366
+ ++ P+ ++Y+ ++ LCK K + + EM D ++ PD V+++ LID +C S
Sbjct: 185 LTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSK 244
Query: 367 RVSHAWELVDDV--------IFIFNVWM 386
+ A LV + F++N M
Sbjct: 245 NLREAMYLVSKLGNAGFKPDCFLYNTIM 272
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 63/122 (51%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P ++ F ++ ++ K+ A+ L +L G PD F ++ +C ++ + A V
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 95 LAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCK 154
K+ + G PD IT+ TL+ GL G+V+ A + +V G+ D TY L+NG+C+
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Query: 155 MG 156
G
Sbjct: 348 KG 349
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
+N +A+ + ++L P +N I+ + A+ + ++ G+ PD T
Sbjct: 244 KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITY 303
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNG 121
LI ++ A L ++ GY PDT T+T+LM G+C G
Sbjct: 304 NTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 176/398 (44%), Gaps = 41/398 (10%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D+A+ +F + P +N +L+ L K I + + G SP+ T +
Sbjct: 403 DEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTM 462
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
+ N+ V ++ G+ PD TF TL+ G A + + + GF
Sbjct: 463 LALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGF 522
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCK--------- 189
TY L+N L + G R+ ++ ++ + KP Y++++ + K
Sbjct: 523 NACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIER 582
Query: 190 -DKLVSDAYNLYSEMLARRVL-------------------------PDVFTYNALIYGFC 223
+ + + S ML R +L PD+ +N+++ F
Sbjct: 583 IENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFT 642
Query: 224 IVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDII 283
+ +A +L+ + + PD T+N L+D + G +A+ +L + K +KPD++
Sbjct: 643 RNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLV 702
Query: 284 TYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKT---KKVDEALNLL 340
+YN+++ G+C + +A + + M +RGI P + +Y+ ++G ++++ + +
Sbjct: 703 SYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECM 762
Query: 341 AEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
A+ DC+ P+ +T+ ++DG C++G+ S A + V +
Sbjct: 763 AKNDCR---PNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 165/372 (44%), Gaps = 5/372 (1%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKM-KHYPTAISLSHQLDFTGISPDIFTLTI 77
+ A+ +F R+ M P+P ++ +N IL KM + + + + ++ G+ D FT +
Sbjct: 227 EKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCST 286
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
+++ + + A A++ GY P T+T+ L++ G AL +
Sbjct: 287 VLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENS 346
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
D VTY L+ + G ++ A ++ + + V P+ YT +I ++ K +A
Sbjct: 347 CPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEAL 406
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
L+ M +P+ TYNA++ S+ E K+L +M + P+ T+N ++
Sbjct: 407 KLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALC 466
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
G +G K V M G +PD T+N+L+ Y A ++ M + G V
Sbjct: 467 GNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACV 526
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDD 377
+Y+ ++N L + N++++M K P +YS ++ K G E +++
Sbjct: 527 TTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNY-LGIERIEN 585
Query: 378 VIF---IFNVWM 386
I IF WM
Sbjct: 586 RIKEGQIFPSWM 597
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 164/329 (49%), Gaps = 10/329 (3%)
Query: 44 LTSLVK----MKHYPTAISLSHQLDFTGISP----DIFTLTILINCYCNQAQITSAFSVL 95
L SLVK H+ A+ L L + S D + I + ++Q + A +L
Sbjct: 139 LVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLL 198
Query: 96 AKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKM 155
KI + Y D +TT++ G+ + A+ + + G VTY ++++ KM
Sbjct: 199 DKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKM 258
Query: 156 GQT-RAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFT 214
G++ R L ++ +++ + +K D + ++ + ++ L+ +A ++E+ + P T
Sbjct: 259 GRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVT 318
Query: 215 YNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMM 274
YNAL+ F EA +L EM + D+ T+N LV A + G KEA V+ +M
Sbjct: 319 YNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMT 378
Query: 275 KQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVD 334
K+GV P+ ITY +++D Y + ++A +F SM + G PN +Y+ +++ L K + +
Sbjct: 379 KKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSN 438
Query: 335 EALNLLAEMDCKNIIPDTVTYSSLIDGLC 363
E + +L +M P+ T+++++ LC
Sbjct: 439 EMIKMLCDMKSNGCSPNRATWNTML-ALC 466
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/418 (17%), Positives = 182/418 (43%), Gaps = 43/418 (10%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A+S+ + S + +N+++ + V+ A + + G+ P+ T T +I
Sbjct: 334 EALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVI 393
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ Y + A + + + G P+T T+ ++ L + ++ + + G
Sbjct: 394 DAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCS 453
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
++ T+ ++ G + ++ R+++ +PD + + +I ++ + DA +
Sbjct: 454 PNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKM 513
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
Y EM V TYNAL+ + ++ +M +K P ++++++ K
Sbjct: 514 YGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAK 573
Query: 260 EGN----------VKEAKTVLAVMM-------------------------KQGVKPDIIT 284
GN +KE + + M+ K G KPD++
Sbjct: 574 GGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVI 633
Query: 285 YNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMD 344
+NS++ + + ++A+ I S+ + G++P++ +Y+ +++ + + +A +L ++
Sbjct: 634 FNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLE 693
Query: 345 CKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV--------IFIFNVWMSYAKAIKL 394
+ PD V+Y+++I G C+ G + A ++ ++ IF +N ++S A+ +
Sbjct: 694 KSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGM 751
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 1/258 (0%)
Query: 122 QVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYT 181
Q A + D + Q + LD Y +++ + G+ A+ L +++ P + Y
Sbjct: 190 QYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYN 249
Query: 182 IIIHSFCK-DKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVT 240
+I+ F K + + EM ++ + D FT + ++ L+EA + E+ +
Sbjct: 250 VILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKS 309
Query: 241 KNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNK 300
P T+N L+ GK G EA +VL M + D +TYN L+ Y +
Sbjct: 310 CGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKE 369
Query: 301 AKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLID 360
A + M ++G+ PN +Y+ +I+ K K DEAL L M +P+T TY++++
Sbjct: 370 AAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLS 429
Query: 361 GLCKSGRVSHAWELVDDV 378
L K R + +++ D+
Sbjct: 430 LLGKKSRSNEMIKMLCDM 447
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 116/254 (45%), Gaps = 8/254 (3%)
Query: 128 QFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQI----QGQLVKPDVEMYTII 183
+F D V ++ R D V+ L+ GL G A+ L + +K D ++ I
Sbjct: 125 RFFDSVKSELLRTDLVS---LVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIF 181
Query: 184 IHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNI 243
+ ++ S A L ++ + L DV Y +++ + + ++A L + M
Sbjct: 182 VRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGP 241
Query: 244 HPDAYTFNILVDALGKEG-NVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAK 302
P T+N+++D GK G + ++ VL M +G+K D T ++++ + +AK
Sbjct: 242 SPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAK 301
Query: 303 DIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGL 362
+ F + G P +Y+ ++ K EAL++L EM+ + D+VTY+ L+
Sbjct: 302 EFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAY 361
Query: 363 CKSGRVSHAWELVD 376
++G A +++
Sbjct: 362 VRAGFSKEAAGVIE 375
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/151 (19%), Positives = 71/151 (47%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A I + +P ++ +N ++ V+ A + L+ + + PD+ + +
Sbjct: 648 DQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTV 707
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I +C + + A +L+++ +RG RP T+ T + G G + +
Sbjct: 708 IKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDC 767
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQ 169
R +++T++++++G C+ G+ A+ + +I+
Sbjct: 768 RPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 182/394 (46%), Gaps = 38/394 (9%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A ++F L P +I + +L ++ K Y + S+ +++ +G D +I
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG-- 137
N + + A L K+ + G P T T+ TL+KG + G+ + + + D ++ +G
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 138 -FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFC-KDKLVSD 195
+ T+ +L+ CK + A +++++++ V+PD Y I + K + V
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA 242
Query: 196 AYNLYSEMLAR-RVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
+ +M+ + + P+ T ++ G+C ++++ + + M + + FN L+
Sbjct: 243 ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLI 302
Query: 255 D---------------------ALGKE----GNVKEAKTVLAVMMKQGVKPDIITYNSLM 289
+ + +E GN K VL +M + VK D+ITY+++M
Sbjct: 303 NGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVM 362
Query: 290 DGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNII 349
+ + + KA +F M + G+ P+ H+YSI+ G + K+ +A LL + ++
Sbjct: 363 NAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-R 421
Query: 350 PDTVTYSSLIDGLCKSGRVSHAWELVDDVIFIFN 383
P+ V ++++I G C +G +DD + +FN
Sbjct: 422 PNVVIFTTVISGWCSNGS-------MDDAMRVFN 448
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 176/369 (47%), Gaps = 31/369 (8%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTS---LVKMKHYPTAISLSHQLDFTGISPDIF 73
N +DAV ++ + P +N ++ K + + L + + P+I
Sbjct: 130 NMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIR 189
Query: 74 TLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQ--FHD 131
T +L+ +C + ++ A+ V+ K+ + G RPDT+T+ T+ G+ A
Sbjct: 190 TFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEK 249
Query: 132 HVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCK-- 189
V+ + + + T I++ G C+ G+ R L+ +R+++ V+ ++ ++ +I+ F +
Sbjct: 250 MVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVM 309
Query: 190 DK---------LVSDAYNLYSEMLARR--------------VLPDVFTYNALIYGFCIVS 226
D+ L+ ++N E++ + V DV TY+ ++ +
Sbjct: 310 DRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAG 369
Query: 227 QLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYN 286
+++A ++ EMV + PDA+ ++IL + K+A+ +L ++ + +P+++ +
Sbjct: 370 YMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFT 428
Query: 287 SLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCK 346
+++ G+C ++ A +FN M + G++PN+ ++ ++ G + K+ +A +L M
Sbjct: 429 TVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGC 488
Query: 347 NIIPDTVTY 355
+ P+ T+
Sbjct: 489 GVKPENSTF 497
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 151/341 (44%), Gaps = 28/341 (8%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P I FN ++ + K K A + +++ G+ PD T + CY + + A S
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 95 LAK--ILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGL 152
+ + ++K +P+ T ++ G C G+V+ L+F + + V + LING
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 153 CKM-------------------------GQTRAALQLMRQIQGQLVKPDVEMYTIIIHSF 187
++ G + +Q++ ++ VK DV Y+ +++++
Sbjct: 306 VEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAW 365
Query: 188 CKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDA 247
+ A ++ EM+ V PD Y+ L G+ + K+A +LL+ ++ ++ P+
Sbjct: 366 SSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNV 424
Query: 248 YTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNS 307
F ++ G++ +A V M K GV P+I T+ +LM GY V + KA+++
Sbjct: 425 VIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQM 484
Query: 308 MPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNI 348
M G+ P ++ ++ DE+ + + CK+I
Sbjct: 485 MRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKCKDI 525
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 148/338 (43%), Gaps = 30/338 (8%)
Query: 72 IFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHD 131
+ + T L+N + + A +V + + G+RP I++TTL+ + + Q +
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 132 HVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSF---C 188
V G +LD + + +IN + G A+Q + +++ + P Y +I +
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 189 KDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAY 248
K + S+ +L E V P++ T+N L+ +C +++EA +++ +M + PD
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224
Query: 249 TFNILVDALGKEGNV--KEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFN 306
T+N + ++G E++ V ++MK+ KP+ T ++ GYC V
Sbjct: 225 TYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284
Query: 307 SMPQRGIAPNVHSYSIMINGLCKTKKVD---------------EALNLLAEMDCK----- 346
M + + N+ ++ +ING + D E + L+ K
Sbjct: 285 RMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLT 344
Query: 347 -----NIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
N+ D +TYS++++ +G + A ++ +++
Sbjct: 345 LMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMV 382
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 113/241 (46%), Gaps = 19/241 (7%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
D + R+ M ++ FN ++ V++ +D GI D TLT+L+
Sbjct: 278 DGLRFVRRMKEMRVEANLVVFNSLINGFVEV------------MDRDGI--DEVTLTLLL 323
Query: 80 NCYCNQAQITS----AFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
+ + ++ VL + + + D IT++T+M G ++ A Q +V
Sbjct: 324 MSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVK 383
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
G + D Y IL G + + + A +L+ + + +P+V ++T +I +C + + D
Sbjct: 384 AGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVE-SRPNVVIFTTVISGWCSNGSMDD 442
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
A ++++M V P++ T+ L++G+ V Q +A ++L M + P+ TF +L +
Sbjct: 443 AMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAE 502
Query: 256 A 256
A
Sbjct: 503 A 503
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 183/402 (45%), Gaps = 46/402 (11%)
Query: 14 SIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVK---MKHYPTAISLSHQLDFTGISP 70
S RN A+S +++ + TP +N ++ L + ++ + +++ +LDF P
Sbjct: 489 SQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFV---P 545
Query: 71 DIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFH 130
D+ T I++N C + +AF+++ + + G RP +++++ L G+V A +
Sbjct: 546 DVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETF 605
Query: 131 DHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKD 190
++ G + D++ Y I+IN + G+ A +L+ ++ ++P YT++I F K
Sbjct: 606 AKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKM 665
Query: 191 KLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTF 250
++ +ML + P+V Y ALI F K + L M +I D +
Sbjct: 666 GMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAY 725
Query: 251 NILVDAL----------------GKE-------------------GNVKEAKTVLAVM-- 273
L+ L GKE GN + V+
Sbjct: 726 ITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGK 785
Query: 274 MKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKV 333
+K+ + P++ +N+++ GYC +++A + SM + GI PN+ +Y+I++ + +
Sbjct: 786 VKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDI 845
Query: 334 DEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
+ A++L +C+ PD V YS+L+ GLC R A L+
Sbjct: 846 ESAIDLFEGTNCE---PDQVMYSTLLKGLCDFKRPLDALALM 884
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 170/406 (41%), Gaps = 45/406 (11%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+D S+ N + + P + + ++ L K A ++ ++ G+ P + + +
Sbjct: 529 EDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSI 588
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I Q ++ A AK+L+ G +PD I + ++ NG++ A + + VV
Sbjct: 589 IGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFL 648
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
R TY +LI+G KMG Q + ++ + P+V +YT +I F K ++
Sbjct: 649 RPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFT 708
Query: 199 LYSEMLARRVLPDVFTYNALIYGF-----------CIVSQLKEATKLLDEM--------- 238
L+ M + D Y L+ G IV KE KLL +
Sbjct: 709 LFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKE--KLLQRLIRTKPLVSI 766
Query: 239 -------------------VTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVK 279
V K+I P+ Y N ++ G + EA L M K+G+
Sbjct: 767 PSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIV 826
Query: 280 PDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNL 339
P+++TY LM + ++ A D+F P+ YS ++ GLC K+ +AL L
Sbjct: 827 PNLVTYTILMKSHIEAGDIESAIDLFEGT---NCEPDQVMYSTLLKGLCDFKRPLDALAL 883
Query: 340 LAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVIFIFNVW 385
+ EM I P+ +Y L+ LC S A ++V D+ + ++W
Sbjct: 884 MLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAAL-DIW 928
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 146/316 (46%), Gaps = 2/316 (0%)
Query: 66 TGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQT 125
GI PD L ++ C + A + L +I+ GY P + + ++ LC +
Sbjct: 125 NGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLE 184
Query: 126 ALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKP-DVEMYTIII 184
A + V +G L + L GLC G A+ ++ + G P V +Y +
Sbjct: 185 AFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLF 244
Query: 185 HSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIH 244
+ FCK ++A L+ M D Y L+ +C + + A +L MV ++
Sbjct: 245 YCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFE 304
Query: 245 PDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDI 304
D FN L+ K G + + + + + M+K+GV+ ++ TY+ ++ YC V+ A +
Sbjct: 305 LDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRL 364
Query: 305 F-NSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLC 363
F N+ I+ NVH Y+ +I G K +D+A++LL M I+PD +TY L+ L
Sbjct: 365 FVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLP 424
Query: 364 KSGRVSHAWELVDDVI 379
K + +A ++ ++
Sbjct: 425 KCHELKYAMVILQSIL 440
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 173/395 (43%), Gaps = 40/395 (10%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
+ D A +I + + + P + ++ I+ SL K A ++ +GI PD
Sbjct: 562 DRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYM 621
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
I+IN Y +I A ++ +++K RP + T+T L+ G G ++ Q+ D ++
Sbjct: 622 IMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLED 681
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFC-------- 188
G + V Y LI K G + + L + +K D Y ++
Sbjct: 682 GLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKK 741
Query: 189 --------KDKLV-------------SDAYNLYSEMLA--------RRVLPDVFTYNALI 219
K+KL+ S N S+ A + ++P+++ +N +I
Sbjct: 742 RQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTII 801
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVK 279
G+C +L EA L+ M + I P+ T+ IL+ + + G+++ A + + +
Sbjct: 802 TGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESA---IDLFEGTNCE 858
Query: 280 PDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNL 339
PD + Y++L+ G C A + M + GI PN SY ++ LC ++ EA+ +
Sbjct: 859 PDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKV 918
Query: 340 LAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
+ +M +I P ++ ++ LI LC+ ++ A L
Sbjct: 919 VKDMAALDIWPRSINHTWLIYILCEEKKLREARAL 953
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 168/391 (42%), Gaps = 37/391 (9%)
Query: 23 SIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCY 82
S+ + R + + T+L ++Y A+S ++ G +P F+ +I C
Sbjct: 463 SLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCL 522
Query: 83 CNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQ 142
+ I S++ I + + PD T+ ++ LC A D + G R
Sbjct: 523 FQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTV 582
Query: 143 VTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSE 202
Y +I L K G+ A + ++ ++PD Y I+I+++ ++ + +A L E
Sbjct: 583 AIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEE 642
Query: 203 MLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGN 262
++ + P FTY LI GF + +++ + LD+M+ + P+ + L+ K+G+
Sbjct: 643 VVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGD 702
Query: 263 VKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDI------------------ 304
K + T+ +M + +K D I Y +L+ G K + +
Sbjct: 703 FKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKP 762
Query: 305 FNSMP-------------------QRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDC 345
S+P ++ I PN++ ++ +I G C ++DEA N L M
Sbjct: 763 LVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQK 822
Query: 346 KNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
+ I+P+ VTY+ L+ ++G + A +L +
Sbjct: 823 EGIVPNLVTYTILMKSHIEAGDIESAIDLFE 853
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 159/388 (40%), Gaps = 35/388 (9%)
Query: 19 DDAVSIFNRLLRMSPTP-PIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTI 77
++A+ + + L M+ P P+ + + K A +L ++ G D T
Sbjct: 218 NEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTC 277
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
L+ YC +T A + ++++R + D F TL+ G G + ++ +G
Sbjct: 278 LMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKG 337
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQG-QLVKPDVEMYTIIIHSFCKDKLVSDA 196
+ + TY I+I CK G AL+L G + + +V YT +I F K + A
Sbjct: 338 VQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKA 397
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEA------------------------- 231
+L ML ++PD TY L+ +LK A
Sbjct: 398 VDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNI 457
Query: 232 ----TKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNS 287
LL E+ K+ + A ++ AL + N A + + M+ G P +YNS
Sbjct: 458 EVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNS 517
Query: 288 LMDGYCLVSE--VNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDC 345
++ CL E + + N + + P+V +Y I++N LCK D A ++ M+
Sbjct: 518 VIK--CLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEE 575
Query: 346 KNIIPDTVTYSSLIDGLCKSGRVSHAWE 373
+ P YSS+I L K GRV A E
Sbjct: 576 LGLRPTVAIYSSIIGSLGKQGRVVEAEE 603
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 170/390 (43%), Gaps = 32/390 (8%)
Query: 21 AVSIFNRLLRMS-PTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
A+ ++ R++ S P I FN ++ +K+ + Q+ G+ ++FT I+I
Sbjct: 291 AMRLYLRMVERSFELDPCI-FNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMI 349
Query: 80 NCYCNQAQITSAFSVLAK-ILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
YC + + A + + +T L+ G G + A+ ++ G
Sbjct: 350 GSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGI 409
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQ-------------------------GQLV 173
D +TY +L+ L K + + A+ +++ I G++
Sbjct: 410 VPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIA 469
Query: 174 KPDVEM----YTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLK 229
+ D + ++ + C + A + +M+ P F+YN++I + ++
Sbjct: 470 RKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIE 529
Query: 230 EATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLM 289
+ L++ + + PD T+ I+V+ L K+ + A ++ M + G++P + Y+S++
Sbjct: 530 DLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSII 589
Query: 290 DGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNII 349
V +A++ F M + GI P+ +Y IMIN + ++DEA L+ E+ +
Sbjct: 590 GSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLR 649
Query: 350 PDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
P + TY+ LI G K G + + +D ++
Sbjct: 650 PSSFTYTVLISGFVKMGMMEKGCQYLDKML 679
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 146/336 (43%), Gaps = 44/336 (13%)
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
L C+C + A ++ + GY D + +T LMK C + + A++ + +V +
Sbjct: 243 LFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERS 302
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
F LD + LI+G K+G + Q+ + V+ +V Y I+I S+CK+ V A
Sbjct: 303 FELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYAL 362
Query: 198 NLY-----SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNI 252
L+ SE ++R +V Y LI+GF + +A LL M+ I PD T+ +
Sbjct: 363 RLFVNNTGSEDISR----NVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFV 418
Query: 253 LVDALGKEGNVKEAKTVLAVMMKQ--GVKPDII--------TYNSLMDGY---------- 292
L+ L K +K A +L ++ G+ P +I SL+
Sbjct: 419 LLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAV 478
Query: 293 -------CLVSEVN--KAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDE---ALNLL 340
L S+ N A M G P SY+ +I L + +++ +N++
Sbjct: 479 GLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNII 538
Query: 341 AEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
E+D +PD TY +++ LCK A+ ++D
Sbjct: 539 QELD---FVPDVDTYLIVVNELCKKNDRDAAFAIID 571
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 3/172 (1%)
Query: 68 ISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTAL 127
I P+++ +I YC ++ A++ L + K G P+ +T+T LMK G +++A+
Sbjct: 790 IIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAI 849
Query: 128 QFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSF 187
+ + DQV Y L+ GLC + AL LM ++Q + P+ + Y ++
Sbjct: 850 DLFEGTNCEP---DQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCL 906
Query: 188 CKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMV 239
C +L +A + +M A + P + LIY C +L+EA L MV
Sbjct: 907 CYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMV 958
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 4/194 (2%)
Query: 84 NQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQV 143
N + A V+ K+ K+ P+ T++ G C G++ A + + +G + V
Sbjct: 772 NYGSKSFAMEVIGKV-KKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLV 830
Query: 144 TYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEM 203
TY IL+ + G +A+ L +G +PD MY+ ++ C K DA L EM
Sbjct: 831 TYTILMKSHIEAGDIESAIDL---FEGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEM 887
Query: 204 LARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNV 263
+ P+ +Y L+ C EA K++ +M +I P + L+ L +E +
Sbjct: 888 QKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKL 947
Query: 264 KEAKTVLAVMMKQG 277
+EA+ + A+M++ G
Sbjct: 948 REARALFAIMVQSG 961
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/336 (19%), Positives = 129/336 (38%), Gaps = 42/336 (12%)
Query: 16 RNA--DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIF 73
RN D+A + +++ P + +++ VKM ++ G+SP++
Sbjct: 629 RNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVV 688
Query: 74 TLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGL----CLNGQVQTALQF 129
T LI + + +F++ + + + D I + TL+ GL + Q ++
Sbjct: 689 LYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEP 748
Query: 130 HDHVVAQ---------------------GFRLDQVT------------YRILINGLCKMG 156
+ Q F ++ + + +I G C G
Sbjct: 749 GKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAG 808
Query: 157 QTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYN 216
+ A + +Q + + P++ YTI++ S + + A +L+ PD Y+
Sbjct: 809 RLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE---GTNCEPDQVMYS 865
Query: 217 ALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQ 276
L+ G C + +A L+ EM I+P+ ++ L+ L EA V+ M
Sbjct: 866 TLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAAL 925
Query: 277 GVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG 312
+ P I + L+ C ++ +A+ +F M Q G
Sbjct: 926 DIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 961
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 168/348 (48%), Gaps = 16/348 (4%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
+N +L+ + ++ L +++ G DI T TILI+ Y +I V K+
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMR 251
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
K G+ D + +++ LC+ G+ AL+F+ ++ +G TY++L++ + K +
Sbjct: 252 KSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEK-- 309
Query: 160 AALQLMRQIQGQLVK----PDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTY 215
+ +++ I +V+ + + + ++ SFC + +A L E+ + + D +
Sbjct: 310 --VDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYF 367
Query: 216 NALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMK 275
L+ G C +++ +A +++D M + + D+ + I++ ++ +V +A V+ K
Sbjct: 368 EILVKGLCRANRMVDALEIVDIMKRRKL-DDSNVYGIIISGYLRQNDVSKALEQFEVIKK 426
Query: 276 QGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDE 335
G P + TY +M + + K ++FN M + GI P+ + + ++ G +V E
Sbjct: 427 SGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAE 486
Query: 336 ALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVIFIFN 383
A + + M+ K I P +YS + LC+S R D++I IFN
Sbjct: 487 AWKVFSSMEEKGIKPTWKSYSIFVKELCRSSR-------YDEIIKIFN 527
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 153/321 (47%), Gaps = 7/321 (2%)
Query: 51 KHYPTAISLSHQLDFTG--ISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTI 108
K + SL +++ G I+ D T I+I Y A ++ G P +
Sbjct: 692 KDFKQMRSLFYEMRRQGCLITQD--TWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSS 749
Query: 109 TFTTLMKGLCLNG--QVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMR 166
TF L+ LC V+ A + ++ GF D+ + + LC++G T+ A +
Sbjct: 750 TFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLD 809
Query: 167 QIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVS 226
+ G++ P Y+I I + C+ + +A + + R L D +TY ++++G
Sbjct: 810 SL-GKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRG 868
Query: 227 QLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYN 286
L++A ++ M P + + L+ KE +++ M + +P ++TY
Sbjct: 869 DLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYT 928
Query: 287 SLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCK 346
+++ GY + +V +A + F +M +RG +P+ +YS IN LC+ K ++AL LL+EM K
Sbjct: 929 AMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDK 988
Query: 347 NIIPDTVTYSSLIDGLCKSGR 367
I P T+ + ++ GL + G+
Sbjct: 989 GIAPSTINFRTVFYGLNREGK 1009
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 118/283 (41%), Gaps = 3/283 (1%)
Query: 56 AISLSHQLDFTGISPDIFTLTILINCYCNQA--QITSAFSVLAKILKRGYRPDTITFTTL 113
AI ++ G+ P T LI C + + A ++++ G+ PD
Sbjct: 732 AIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDY 791
Query: 114 MKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLV 173
+ LC G + A D + GF + V Y I I LC++G+ AL + +G+
Sbjct: 792 LGCLCEVGNTKDAKSCLDSLGKIGFPV-TVAYSIYIRALCRIGKLEEALSELASFEGERS 850
Query: 174 KPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATK 233
D Y I+H + + A + + M P V Y +LI F QL++ +
Sbjct: 851 LLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLE 910
Query: 234 LLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYC 293
+M ++ P T+ ++ G V+EA M ++G PD TY+ ++ C
Sbjct: 911 TCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLC 970
Query: 294 LVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEA 336
+ A + + M +GIAP+ ++ + GL + K D A
Sbjct: 971 QACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLA 1013
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 115/287 (40%), Gaps = 38/287 (13%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLV--KMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
A+ F + M P F ++T L K ++ A ++ +G PD +
Sbjct: 732 AIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDY 791
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
+ C C A S L + K G+ P T+ ++ ++ LC G+++ AL +
Sbjct: 792 LGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERS 850
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKL------ 192
LDQ TY +++GL + G + AL + ++ KP V +YT +I F K+K
Sbjct: 851 LLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLE 910
Query: 193 -----------------------------VSDAYNLYSEMLARRVLPDVFTYNALIYGFC 223
V +A+N + M R PD TY+ I C
Sbjct: 911 TCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLC 970
Query: 224 IVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVL 270
+ ++A KLL EM+ K I P F + L +EG A+ L
Sbjct: 971 QACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLARIAL 1017
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 169/421 (40%), Gaps = 56/421 (13%)
Query: 7 LKNSLPPSIRNADDAVSIFN--RLLRMSPTPPII---------EFNKILTSLVKMKHYPT 55
L S ++ V +N +L++ S PP + E ++L+S +
Sbjct: 574 LNGSGKAEFSQEEELVDDYNCPQLVQQSALPPALSAVDKMDVQEICRVLSSSRDWERTQE 633
Query: 56 AISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMK 115
A+ S + FT P++ + +L + + FS + K + GY+ ++ + +K
Sbjct: 634 ALEKS-TVQFT---PEL-VVEVLRHAKIQGNAVLRFFSWVGK--RNGYKHNSEAYNMSIK 686
Query: 116 GLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKP 175
+ + QG + Q T+ I+I + G T A++ ++++ + P
Sbjct: 687 VAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIP 746
Query: 176 DVEMYTIIIHSFC--KDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATK 233
+ +I C K + V +A + EM+ +PD + C V K+A
Sbjct: 747 SSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKS 806
Query: 234 LLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYC 293
LD + K P ++I + AL + G ++EA + LA + D TY S++ G
Sbjct: 807 CLDSL-GKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLL 865
Query: 294 LVSEVNKAKDIFNSMPQRGIAPNVH----------------------------------- 318
++ KA D NSM + G P VH
Sbjct: 866 QRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVV 925
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+Y+ MI G KV+EA N M+ + PD TYS I+ LC++ + A +L+ ++
Sbjct: 926 TYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEM 985
Query: 379 I 379
+
Sbjct: 986 L 986
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/409 (20%), Positives = 169/409 (41%), Gaps = 47/409 (11%)
Query: 28 LLRMSPTPPIIE-FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQA 86
+++ S PP + + +I+ L K+K + +L +++ GI PD +T ++ + Q
Sbjct: 423 VIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQN 482
Query: 87 QITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYR 146
++ A+ V + + ++G +P +++ +K LC + + ++ + + A + +
Sbjct: 483 RVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFS 542
Query: 147 ILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLAR 206
+I+ + K G+ + + L+++IQ + E+ F +++ + D YN +++ +
Sbjct: 543 WVISSMEKNGE-KEKIHLIKEIQKRSNSYCDELNGSGKAEFSQEEELVDDYNC-PQLVQQ 600
Query: 207 RVLPDVFTY--NALIYGFCIV---SQLKEATKLLDEMVTKNIHP---------------- 245
LP + + C V S+ E T+ E T P
Sbjct: 601 SALPPALSAVDKMDVQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNA 660
Query: 246 ------------------DAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNS 287
+AY +I V GK + K+ +++ M +QG T+
Sbjct: 661 VLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGK--DFKQMRSLFYEMRRQGCLITQDTWAI 718
Query: 288 LMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLC--KTKKVDEALNLLAEMDC 345
++ Y N A F M G+ P+ ++ +I LC K + V+EA EM
Sbjct: 719 MIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIR 778
Query: 346 KNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVIFI-FNVWMSYAKAIK 393
+PD + LC+ G A +D + I F V ++Y+ I+
Sbjct: 779 SGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYIR 827
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%)
Query: 250 FNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMP 309
+N ++ G+ N+ +++ M K G DI T+ L+ Y ++ K +F M
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMR 251
Query: 310 QRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVS 369
+ G + +Y+IMI LC + D AL EM K I TY L+D + KS +V
Sbjct: 252 KSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVD 311
Query: 370 HAWELVDDVIFIFNV 384
+ DD++ I +
Sbjct: 312 VVQSIADDMVRICEI 326
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/240 (19%), Positives = 96/240 (40%), Gaps = 1/240 (0%)
Query: 23 SIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCY 82
SI + ++R+ F +L S A+ L +L + D IL+
Sbjct: 315 SIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGL 374
Query: 83 CNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQ 142
C ++ A ++ I+KR D+ + ++ G V AL+ + + G
Sbjct: 375 CRANRMVDALEIV-DIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRV 433
Query: 143 VTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSE 202
TY ++ L K+ Q L ++ ++PD T ++ V++A+ ++S
Sbjct: 434 STYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSS 493
Query: 203 MLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGN 262
M + + P +Y+ + C S+ E K+ ++M I F+ ++ ++ K G
Sbjct: 494 MEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGE 553
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 178/388 (45%), Gaps = 14/388 (3%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTG-ISPDIFTLTI 77
+DA+S+F L + + F+ +L +VK A + + + ++ I L +
Sbjct: 98 EDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNL 157
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQF----HDHV 133
L+ C + A V ++ +G PD ++ LMKG CL G+++ A +
Sbjct: 158 LMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRI 217
Query: 134 VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIII--HSFCKDK 191
+G D V YRIL++ LC G+ A++++ +I + +K Y I H +
Sbjct: 218 SQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSE 277
Query: 192 LVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFN 251
+ L +E L R +P + +Y+A+ +L E ++L M +K P + +
Sbjct: 278 GIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYG 337
Query: 252 ILVDALGKEGNVKEAKTVLAVMMKQG-VKPDIITYNSLMDGYCLVSEVNKAKDIFNSMP- 309
V AL + G +KEA +V+ M QG P + YN L+ G C + +A M
Sbjct: 338 AKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSK 397
Query: 310 QRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVS 369
Q N +Y +++GLC+ + EA ++ EM K+ P TY +I GLC R
Sbjct: 398 QVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRY 457
Query: 370 HA--W--ELV-DDVIFIFNVWMSYAKAI 392
A W E+V D++ +VW + A+++
Sbjct: 458 EAVMWLEEMVSQDMVPESSVWKALAESV 485
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 5/170 (2%)
Query: 215 YNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVL-AVM 273
+ ++I F +L++A L + N + +F+ L+ + KE ++ A +
Sbjct: 84 FASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYC 143
Query: 274 MKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKV 333
V I N LM C V+ + A +F M +G P+ SY I++ G C K+
Sbjct: 144 YGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKL 203
Query: 334 DEALNLLAEM----DCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+EA +LL M K D V Y L+D LC +G V A E++ ++
Sbjct: 204 EEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKIL 253
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 178/388 (45%), Gaps = 14/388 (3%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTG-ISPDIFTLTI 77
+DA+S+F L + + F+ +L +VK A + + + ++ I L +
Sbjct: 98 EDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNL 157
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQF----HDHV 133
L+ C + A V ++ +G PD ++ LMKG CL G+++ A +
Sbjct: 158 LMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRI 217
Query: 134 VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIII--HSFCKDK 191
+G D V YRIL++ LC G+ A++++ +I + +K Y I H +
Sbjct: 218 SQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSE 277
Query: 192 LVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFN 251
+ L +E L R +P + +Y+A+ +L E ++L M +K P + +
Sbjct: 278 GIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYG 337
Query: 252 ILVDALGKEGNVKEAKTVLAVMMKQG-VKPDIITYNSLMDGYCLVSEVNKAKDIFNSMP- 309
V AL + G +KEA +V+ M QG P + YN L+ G C + +A M
Sbjct: 338 AKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSK 397
Query: 310 QRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVS 369
Q N +Y +++GLC+ + EA ++ EM K+ P TY +I GLC R
Sbjct: 398 QVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRY 457
Query: 370 HA--W--ELV-DDVIFIFNVWMSYAKAI 392
A W E+V D++ +VW + A+++
Sbjct: 458 EAVMWLEEMVSQDMVPESSVWKALAESV 485
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 5/170 (2%)
Query: 215 YNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVL-AVM 273
+ ++I F +L++A L + N + +F+ L+ + KE ++ A +
Sbjct: 84 FASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYC 143
Query: 274 MKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKV 333
V I N LM C V+ + A +F M +G P+ SY I++ G C K+
Sbjct: 144 YGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKL 203
Query: 334 DEALNLLAEM----DCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+EA +LL M K D V Y L+D LC +G V A E++ ++
Sbjct: 204 EEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKIL 253
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 133/277 (48%), Gaps = 1/277 (0%)
Query: 104 RPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQ 163
+P+ +T ++ L G + L+ D + +QG +Y LIN + G+ +L+
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 164 LMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY-NLYSEMLARRVLPDVFTYNALIYGF 222
L+ +++ + + P + Y +I++ + L + L++EM + PD+ TYN L+
Sbjct: 198 LLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSAC 257
Query: 223 CIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDI 282
I EA + M I PD T++ LV+ GK +++ +L M G PDI
Sbjct: 258 AIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDI 317
Query: 283 ITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAE 342
+YN L++ Y + +A +F+ M G PN ++YS+++N ++ + D+ L E
Sbjct: 318 TSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLE 377
Query: 343 MDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
M N PD TY+ LI+ + G L D++
Sbjct: 378 MKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMV 414
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 152/354 (42%), Gaps = 1/354 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D + +F+ + + + + ++ + + Y T++ L ++ ISP I T +
Sbjct: 158 DKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTV 217
Query: 79 IN-CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
IN C + A++ G +PD +T+ TL+ + G A + G
Sbjct: 218 INACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGG 277
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
D TY L+ K+ + L+ ++ PD+ Y +++ ++ K + +A
Sbjct: 278 IVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAM 337
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
++ +M A P+ TY+ L+ F + + +L EM + N PDA T+NIL++
Sbjct: 338 GVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVF 397
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
G+ G KE T+ M+++ ++PD+ TY ++ A+ I M I P+
Sbjct: 398 GEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSS 457
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
+Y+ +I + +EAL M P T+ SL+ + G V +
Sbjct: 458 KAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKES 511
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 139/298 (46%), Gaps = 1/298 (0%)
Query: 70 PDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQF 129
P+ TI+I+ + + V ++ +G ++T L+ NG+ +T+L+
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198
Query: 130 HDHVVAQGFRLDQVTYRILINGLCKMG-QTRAALQLMRQIQGQLVKPDVEMYTIIIHSFC 188
D + + +TY +IN + G L L +++ + ++PD+ Y ++ +
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258
Query: 189 KDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAY 248
L +A ++ M ++PD+ TY+ L+ F + +L++ LL EM + PD
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDIT 318
Query: 249 TFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM 308
++N+L++A K G++KEA V M G P+ TY+ L++ + + + +F M
Sbjct: 319 SYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM 378
Query: 309 PQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
P+ +Y+I+I + E + L +M +NI PD TY +I K G
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGG 436
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 144/330 (43%), Gaps = 2/330 (0%)
Query: 15 IRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFT 74
+R + + + P I +N +L + K A+ + HQ+ G +P+ T
Sbjct: 295 LRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANT 354
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQ-FHDHV 133
++L+N + + + ++ PD T+ L++ G + + FHD +
Sbjct: 355 YSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHD-M 413
Query: 134 VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLV 193
V + D TY +I K G A ++++ + + P + YT +I +F + L
Sbjct: 414 VEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALY 473
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
+A ++ M P + T+++L+Y F +KE+ +L +V I + TFN
Sbjct: 474 EEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQ 533
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
++A + G +EA M K PD T +++ Y V++ ++ F M I
Sbjct: 534 IEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDI 593
Query: 314 APNVHSYSIMINGLCKTKKVDEALNLLAEM 343
P++ Y +M+ KT++ D+ LL EM
Sbjct: 594 LPSIMCYCMMLAVYGKTERWDDVNELLEEM 623
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 156/362 (43%)
Query: 18 ADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTI 77
D+A +F + P + ++ ++ + K++ L ++ G PDI + +
Sbjct: 263 GDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNV 322
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
L+ Y I A V ++ G P+ T++ L+ +G+ Q + +
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 382
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
D TY ILI + G + + L + + ++PD+E Y II + K L DA
Sbjct: 383 TDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDAR 442
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
+ M A ++P Y +I F + +EA + M +P TF+ L+ +
Sbjct: 443 KILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSF 502
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
+ G VKE++ +L+ ++ G+ + T+N+ ++ Y + +A + M + P+
Sbjct: 503 ARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDE 562
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDD 377
+ +++ + VDE EM +I+P + Y ++ K+ R EL+++
Sbjct: 563 RTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEE 622
Query: 378 VI 379
++
Sbjct: 623 ML 624
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/301 (18%), Positives = 121/301 (40%), Gaps = 5/301 (1%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+ V++F+ ++ + P + + I+ + K + A + + I P T +I
Sbjct: 405 EVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVI 464
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ A A + + G P TF +L+ G V+ + +V G
Sbjct: 465 EAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIP 524
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
++ T+ I + G+ A++ ++ PD ++ + +LV +
Sbjct: 525 RNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQ 584
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTK---NIHPDAYTFNILVDA 256
+ EM A +LP + Y ++ + + + +LL+EM++ NIH ++
Sbjct: 585 FEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIH--QVIGQMIKGD 642
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
+ N + + VL + +G I YN+L+D + + +A + N +RG+ P
Sbjct: 643 YDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPE 702
Query: 317 V 317
+
Sbjct: 703 L 703
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 152/314 (48%), Gaps = 1/314 (0%)
Query: 47 LVKMKHYPTAISLSHQLDFT-GISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRP 105
L +M +Y A+ + L G D T T ++ Q +L ++++ G +P
Sbjct: 333 LKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKP 392
Query: 106 DTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLM 165
+T+T+ L+ ++ A+ + + G D+VTY LI+ K G A+ +
Sbjct: 393 NTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMY 452
Query: 166 RQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIV 225
+++Q + PD Y++II+ K + A+ L+ EM+ + P++ T+N +I
Sbjct: 453 QRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKA 512
Query: 226 SQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITY 285
+ A KL +M PD T++I+++ LG G ++EA+ V A M ++ PD Y
Sbjct: 513 RNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVY 572
Query: 286 NSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDC 345
L+D + V+KA + +M Q G+ PNV + + +++ + ++ EA NLL M
Sbjct: 573 GLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLA 632
Query: 346 KNIIPDTVTYSSLI 359
+ P TY+ L+
Sbjct: 633 LGLHPSLQTYTLLL 646
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 142/288 (49%), Gaps = 4/288 (1%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
+ ++ +L + K + L ++ G P+ T LI+ Y + A +V ++
Sbjct: 362 YTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQ 421
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
+ G PD +T+ TL+ G + A+ + + G D TY ++IN L K G
Sbjct: 422 EAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLP 481
Query: 160 AALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNAL- 218
AA +L ++ GQ P++ + I+I K + A LY +M PD TY+ +
Sbjct: 482 AAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVM 541
Query: 219 -IYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQG 277
+ G C L+EA + EM KN PD + +LVD GK GNV +A M++ G
Sbjct: 542 EVLGHCGF--LEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAG 599
Query: 278 VKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMIN 325
++P++ T NSL+ + V +++A ++ SM G+ P++ +Y+++++
Sbjct: 600 LRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 116/237 (48%)
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
GF+ D TY ++ L + Q +L+ ++ KP+ Y +IHS+ + + +A
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
N++++M PD TY LI L A + M + PD +T++++++
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
LGK G++ A + M+ QG P+++T+N ++ + A ++ M G P+
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWE 373
+YSI++ L ++EA + AEM KN +PD Y L+D K+G V AW+
Sbjct: 534 KVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQ 590
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 155/357 (43%), Gaps = 14/357 (3%)
Query: 30 RMSPTP-----PIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCN 84
R +PTP P + + L + K A H G D + ++ N
Sbjct: 282 RTAPTPRQHCNPGYVVENVSSILRRFKWGHAAEEALHNF---GFRMDAYQANQVLKQMDN 338
Query: 85 QAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVT 144
A F L + + G++ D T+TT++ L Q + D +V G + + VT
Sbjct: 339 YANALGFFYWLKR--QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVT 396
Query: 145 YRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEML 204
Y LI+ + + A+ + Q+Q +PD Y +I K + A ++Y M
Sbjct: 397 YNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 456
Query: 205 ARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVK 264
+ PD FTY+ +I L A +L EMV + P+ TFNI++ K N +
Sbjct: 457 EAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYE 516
Query: 265 EAKTVLAVMMKQGVKPDIITYNSLMD--GYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSI 322
A + M G +PD +TY+ +M+ G+C E +A+ +F M ++ P+ Y +
Sbjct: 517 TALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLE--EAEGVFAEMQRKNWVPDEPVYGL 574
Query: 323 MINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+++ K VD+A M + P+ T +SL+ + R+S A+ L+ ++
Sbjct: 575 LVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSML 631
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 117/235 (49%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A+++FN++ P + + ++ K A+ + ++ G+SPD FT +++I
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
NC + +A + +++ +G P+ +TF ++ +TAL+ + + GF+
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQ 531
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
D+VTY I++ L G A + ++Q + PD +Y +++ + K V A+
Sbjct: 532 PDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQW 591
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
Y ML + P+V T N+L+ F V ++ EA LL M+ +HP T+ +L+
Sbjct: 592 YQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 126/306 (41%), Gaps = 39/306 (12%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A+ ++ R+ +P ++ I+ L K H P A L ++ G +P++ T I+
Sbjct: 446 DIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIM 505
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I + +A + + G++PD +T++ +M+ L G ++ A + + +
Sbjct: 506 IALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNW 565
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D+ Y +L++ K G A Q + + ++P+V ++ +F + +S+AYN
Sbjct: 566 VPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYN 625
Query: 199 LYSEMLARRVLPDVFTYNALI-----------YGFCIVSQL------------------- 228
L MLA + P + TY L+ GFC QL
Sbjct: 626 LLQSMLALGLHPSLQTYTLLLSCCTDARSNFDMGFC--GQLMAVSGHPAHMFLLKMPPAG 683
Query: 229 -------KEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPD 281
+ LD M +++ + +VD L K G +EA +V V + V PD
Sbjct: 684 PDGQKVRDHVSNFLDFMHSEDRESKRGLMDAVVDFLHKSGLKEEAGSVWEVAAGKNVYPD 743
Query: 282 IITYNS 287
+ S
Sbjct: 744 ALREKS 749
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 146/313 (46%), Gaps = 12/313 (3%)
Query: 74 TLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA----LQF 129
T+ ++ + + A + ++ + G +T + L+ LC +V+ A LQ
Sbjct: 157 TVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL 216
Query: 130 HDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCK 189
H+ T+ I I+G CK + AL +++++G +P V YT II +C+
Sbjct: 217 KSHITPNAH-----TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ 271
Query: 190 DKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYT 249
Y + SEM A P+ TY ++ + +EA ++ M PD+
Sbjct: 272 QFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLF 331
Query: 250 FNILVDALGKEGNVKEAKTVLAVMMKQ-GVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM 308
+N L+ L + G ++EA+ V V M + GV + TYNS++ YC E +KA ++ M
Sbjct: 332 YNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEM 391
Query: 309 PQRGIA-PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIP-DTVTYSSLIDGLCKSG 366
+ P+VH+Y ++ K V E LL EM K+ + D TY+ LI LC++
Sbjct: 392 ESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRAN 451
Query: 367 RVSHAWELVDDVI 379
A+ L +++I
Sbjct: 452 MCEWAYCLFEEMI 464
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 151/321 (47%), Gaps = 5/321 (1%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++AV IF+RL N +L +L K K A + QL + I+P+ T I
Sbjct: 172 EEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK-SHITPNAHTFNIF 230
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ +C ++ A + ++ G+RP I++TT+++ C + + + A G
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ +TY +++ L + AL++ +++ KPD Y +IH+ + + +A
Sbjct: 291 PPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAER 350
Query: 199 LYS-EMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNI-HPDAYTFNILVDA 256
++ EM V + TYN++I +C + +A +LL EM + N+ +PD +T+ L+ +
Sbjct: 351 VFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRS 410
Query: 257 LGKEGNVKEAKTVLAVMM-KQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
K G+V E +L M+ K + D TY L+ C + A +F M + I P
Sbjct: 411 CFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITP 470
Query: 316 NVHSYSIMINGLCKTKKVDEA 336
H +++ K K + E+
Sbjct: 471 R-HRTCLLLLEEVKKKNMHES 490
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 123/283 (43%), Gaps = 38/283 (13%)
Query: 29 LRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQI 88
L+ TP FN + K A+ ++ G P + + T +I CYC Q +
Sbjct: 216 LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEF 275
Query: 89 TSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQ---------------FHD-- 131
+ +L+++ G P++IT+TT+M L + + AL+ F++
Sbjct: 276 IKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCL 335
Query: 132 -HVVAQGFRLDQV------------------TYRILINGLCKMGQTRAALQLMRQIQG-Q 171
H +A+ RL++ TY +I C + A++L+++++
Sbjct: 336 IHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSN 395
Query: 172 LVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLP-DVFTYNALIYGFCIVSQLKE 230
L PDV Y ++ S K V + L EM+ + L D TY LI C + +
Sbjct: 396 LCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEW 455
Query: 231 ATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVM 273
A L +EM++++I P T +L++ + K+ + A+ + +M
Sbjct: 456 AYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIM 498
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 146/313 (46%), Gaps = 12/313 (3%)
Query: 74 TLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA----LQF 129
T+ ++ + + A + ++ + G +T + L+ LC +V+ A LQ
Sbjct: 157 TVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL 216
Query: 130 HDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCK 189
H+ T+ I I+G CK + AL +++++G +P V YT II +C+
Sbjct: 217 KSHITPNAH-----TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ 271
Query: 190 DKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYT 249
Y + SEM A P+ TY ++ + +EA ++ M PD+
Sbjct: 272 QFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLF 331
Query: 250 FNILVDALGKEGNVKEAKTVLAVMMKQ-GVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM 308
+N L+ L + G ++EA+ V V M + GV + TYNS++ YC E +KA ++ M
Sbjct: 332 YNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEM 391
Query: 309 PQRGIA-PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIP-DTVTYSSLIDGLCKSG 366
+ P+VH+Y ++ K V E LL EM K+ + D TY+ LI LC++
Sbjct: 392 ESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRAN 451
Query: 367 RVSHAWELVDDVI 379
A+ L +++I
Sbjct: 452 MCEWAYCLFEEMI 464
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 151/321 (47%), Gaps = 5/321 (1%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++AV IF+RL N +L +L K K A + QL + I+P+ T I
Sbjct: 172 EEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK-SHITPNAHTFNIF 230
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ +C ++ A + ++ G+RP I++TT+++ C + + + A G
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ +TY +++ L + AL++ +++ KPD Y +IH+ + + +A
Sbjct: 291 PPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAER 350
Query: 199 LYS-EMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNI-HPDAYTFNILVDA 256
++ EM V + TYN++I +C + +A +LL EM + N+ +PD +T+ L+ +
Sbjct: 351 VFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRS 410
Query: 257 LGKEGNVKEAKTVLAVMM-KQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
K G+V E +L M+ K + D TY L+ C + A +F M + I P
Sbjct: 411 CFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITP 470
Query: 316 NVHSYSIMINGLCKTKKVDEA 336
H +++ K K + E+
Sbjct: 471 R-HRTCLLLLEEVKKKNMHES 490
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 123/283 (43%), Gaps = 38/283 (13%)
Query: 29 LRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQI 88
L+ TP FN + K A+ ++ G P + + T +I CYC Q +
Sbjct: 216 LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEF 275
Query: 89 TSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQ---------------FHD-- 131
+ +L+++ G P++IT+TT+M L + + AL+ F++
Sbjct: 276 IKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCL 335
Query: 132 -HVVAQGFRLDQV------------------TYRILINGLCKMGQTRAALQLMRQIQG-Q 171
H +A+ RL++ TY +I C + A++L+++++
Sbjct: 336 IHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSN 395
Query: 172 LVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLP-DVFTYNALIYGFCIVSQLKE 230
L PDV Y ++ S K V + L EM+ + L D TY LI C + +
Sbjct: 396 LCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEW 455
Query: 231 ATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVM 273
A L +EM++++I P T +L++ + K+ + A+ + +M
Sbjct: 456 AYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIM 498
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 147/303 (48%)
Query: 69 SPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQ 128
+P +F +++ Q A + ++ +R PD T++TL+ G +AL
Sbjct: 152 TPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALS 211
Query: 129 FHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFC 188
+ + D V Y LI ++ A+ + +++ + PD+ Y +I+ +
Sbjct: 212 WLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYG 271
Query: 189 KDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAY 248
K KL +A L EM VLP+ +Y+ L+ + + EA + EM N D
Sbjct: 272 KAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLT 331
Query: 249 TFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM 308
T NI++D G+ VKEA + + K ++P++++YN+++ Y +A +F M
Sbjct: 332 TCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLM 391
Query: 309 PQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRV 368
++ I NV +Y+ MI KT + ++A NL+ EM + I P+ +TYS++I K+G++
Sbjct: 392 QRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKL 451
Query: 369 SHA 371
A
Sbjct: 452 DRA 454
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 166/348 (47%), Gaps = 6/348 (1%)
Query: 34 TPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFS 93
TP + +N +L ++++ K + A L ++ ++PD +T + LI + + SA S
Sbjct: 152 TPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALS 211
Query: 94 VLAKILKRGYRPDTITFTTLM---KGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILIN 150
L K+ + D + ++ L+ + LC A+ + G D V Y +IN
Sbjct: 212 WLQKMEQDRVSGDLVLYSNLIELSRRLC---DYSKAISIFSRLKRSGITPDLVAYNSMIN 268
Query: 151 GLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLP 210
K R A L++++ V P+ Y+ ++ + ++ +A ++++EM
Sbjct: 269 VYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCAL 328
Query: 211 DVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVL 270
D+ T N +I + + +KEA +L + +I P+ ++N ++ G+ EA +
Sbjct: 329 DLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLF 388
Query: 271 AVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKT 330
+M ++ ++ +++TYN+++ Y E KA ++ M RGI PN +YS +I+ K
Sbjct: 389 RLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKA 448
Query: 331 KKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
K+D A L ++ + D V Y ++I + G + HA L+ ++
Sbjct: 449 GKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHEL 496
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 169/358 (47%), Gaps = 4/358 (1%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A+S ++ + + ++ ++ ++ ++ Y AIS+ +L +GI+PD+ +
Sbjct: 207 DSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSM 266
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
IN Y A ++ ++ + G P+T++++TL+ N + AL +
Sbjct: 267 INVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNC 326
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
LD T I+I+ ++ + A +L ++ ++P+V Y I+ + + +L +A +
Sbjct: 327 ALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIH 386
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L+ M + + +V TYN +I + + ++AT L+ EM ++ I P+A T++ ++ G
Sbjct: 387 LFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWG 446
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
K G + A T+ + GV+ D + Y +++ Y V + AK + + + P
Sbjct: 447 KAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRET 506
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
+ +I L K + +EA + + + D + +I+ ++ R + E+ +
Sbjct: 507 AITI----LAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFE 560
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 148/334 (44%), Gaps = 12/334 (3%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A +F L +M P ++ +N IL + + + AI L + I ++ T +I
Sbjct: 348 EADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMI 407
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
Y + A +++ ++ RG P+ IT++T++ G++ A + + G
Sbjct: 408 KIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVE 467
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
+DQV Y+ +I ++G A +L+ +++ PD I K +A +
Sbjct: 468 IDQVLYQTMIVAYERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGRTEEATWV 523
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+ + + D+ + +I + + ++ ++M T PD+ ++++A GK
Sbjct: 524 FRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGK 583
Query: 260 EGNVKEAKTVLAVMMKQG-VKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
+ ++A TV M ++G V PD + + ++ Y + + +F + PNV+
Sbjct: 584 QREFEKADTVYREMQEEGCVFPDEVHFQ-MLSLYSSKKDFEMVESLFQRLES---DPNVN 639
Query: 319 SYS--IMINGLC-KTKKVDEALNLLAEMDCKNII 349
S +++ L + K+++A ++ M + I+
Sbjct: 640 SKELHLVVAALYERADKLNDASRVMNRMRERGIL 673
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 143/286 (50%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
+ ++ +L + K + L ++ G P+ T LI+ Y + A +V ++
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
+ G +PD +T+ TL+ G + A+ + + A G D TY ++IN L K G
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 160 AALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
AA +L ++ Q P++ Y I++ K + +A LY +M PD TY+ ++
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVK 279
L+EA + EM KN PD + +LVD GK GNV++A M+ G++
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 280 PDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMIN 325
P++ T NSL+ + V+++ +A ++ +M G+ P++ +Y+++++
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 139/304 (45%), Gaps = 15/304 (4%)
Query: 82 YCNQAQITSAFSVLAKILKRG-----------YRPDTITFTTLMKGLCLNGQVQTALQFH 130
YCN I S + + + G R D ++K + G AL F
Sbjct: 295 YCNSGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYG---NALGFF 351
Query: 131 DHVVAQ-GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCK 189
+ Q GF+ D TY ++ L + Q A +L+ ++ +P+ Y +IHS+ +
Sbjct: 352 YWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGR 411
Query: 190 DKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYT 249
+++A N++++M PD TY LI L A + M + PD +T
Sbjct: 412 ANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFT 471
Query: 250 FNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMP 309
++++++ LGK G++ A + M+ QG P+++TYN +MD + A ++ M
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 531
Query: 310 QRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVS 369
G P+ +YSI++ L ++EA + EM KN IPD Y L+D K+G V
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVE 591
Query: 370 HAWE 373
AW+
Sbjct: 592 KAWQ 595
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 151/322 (46%), Gaps = 2/322 (0%)
Query: 47 LVKMKHYPTAISLSHQLDFT-GISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRP 105
L +M Y A+ + L G D T T ++ Q + +L ++++ G +P
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQP 397
Query: 106 DTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLM 165
+T+T+ L+ + A+ + + G + D+VTY LI+ K G A+ +
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 166 RQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIV 225
+++Q + PD Y++II+ K + A+ L+ EM+ + P++ TYN ++
Sbjct: 458 QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKA 517
Query: 226 SQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITY 285
+ A KL +M PD T++I+++ LG G ++EA+ V M ++ PD Y
Sbjct: 518 RNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVY 577
Query: 286 NSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDC 345
L+D + V KA + +M G+ PNV + + +++ + K+ EA LL M
Sbjct: 578 GLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLA 637
Query: 346 KNIIPDTVTYSSLIDGLCKSGR 367
+ P TY+ L+ C GR
Sbjct: 638 LGLRPSLQTYTLLLS-CCTDGR 658
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 137/285 (48%), Gaps = 6/285 (2%)
Query: 99 LKR--GYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMG 156
LKR G++ D T+TT++ L Q + D +V G + + VTY LI+ +
Sbjct: 354 LKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRAN 413
Query: 157 QTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYN 216
A+ + Q+Q KPD Y +I K + A ++Y M A + PD FTY+
Sbjct: 414 YLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYS 473
Query: 217 ALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQ 276
+I L A KL EMV + P+ T+NI++D K N + A + M
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 277 GVKPDIITYNSLMD--GYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVD 334
G +PD +TY+ +M+ G+C E +A+ +F M Q+ P+ Y ++++ K V+
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLE--EAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVE 591
Query: 335 EALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+A M + P+ T +SL+ + +++ A+EL+ +++
Sbjct: 592 KAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 157/346 (45%), Gaps = 14/346 (4%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++A+++FN++ P + + ++ K A+ + ++ G+SPD FT +++
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
INC + +A + +++ +G P+ +T+ +M Q AL+ + + GF
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D+VTY I++ L G A + ++Q + PD +Y +++ + K V A+
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
Y ML + P+V T N+L+ F V+++ EA +LL M+ + P T+ +L+
Sbjct: 596 WYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCC- 654
Query: 259 KEGNVKEAKTVLAVMMKQGVKPD----IITYNSLMDGYCLVSEVNKAKDIFNS---MPQR 311
+G K +M P + + DG + + N D+ +S +R
Sbjct: 655 TDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKR 714
Query: 312 GIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSS 357
G+ V ++ L K+ + +EA ++ KN+ PD + S
Sbjct: 715 GLVDAV------VDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKS 754
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 121/243 (49%), Gaps = 5/243 (2%)
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIII----HSFCKDKLVSDA 196
D Y LI+ + K GQTR A+ L +++ +PD +Y +I H+ K K +
Sbjct: 132 DNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKV 191
Query: 197 YNLYSEMLA-RRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
+M R P+V TYN L+ F ++ + L ++ + PD YTFN ++D
Sbjct: 192 RGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMD 251
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
A GK G +KE + VL M KPDIIT+N L+D Y E K + F S+ + P
Sbjct: 252 AYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKP 311
Query: 316 NVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
+ +++ MI K + +D+A + +M+ N IP +TY +I G VS A E+
Sbjct: 312 TLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIF 371
Query: 376 DDV 378
++V
Sbjct: 372 EEV 374
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 129/277 (46%), Gaps = 15/277 (5%)
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
+R Y PD ++ L+ + GQ + A+ + G R D Y LI TR
Sbjct: 126 QRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHL---HTR 182
Query: 160 AALQLMRQIQGQLVK--------PDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPD 211
+ + +++G L K P+V Y I++ +F + V L+ ++ V PD
Sbjct: 183 DKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPD 242
Query: 212 VFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLA 271
V+T+N ++ + +KE +L M + PD TFN+L+D+ GK+ ++ +
Sbjct: 243 VYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFK 302
Query: 272 VMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYS--IMINGLCK 329
+M+ KP + T+NS++ Y ++KA+ +F M P+ +Y IM+ G C
Sbjct: 303 SLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCG 362
Query: 330 TKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
+ V A + E+ + + T +++++ C++G
Sbjct: 363 S--VSRAREIFEEVGESDRVLKASTLNAMLEVYCRNG 397
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 124/303 (40%), Gaps = 9/303 (2%)
Query: 70 PDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQ- 128
PD + LI+ + Q A + +++ G RPD + L+ AL+
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 129 ---FHDHVVA-QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIII 184
+ D + + + + VTY IL+ + G+ L + + V PDV + ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 185 HSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIH 244
++ K+ ++ + + + M + PD+ T+N LI + + ++ + ++
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 245 PDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNS--LMDGYCLVSEVNKAK 302
P TFN ++ GK + +A+ V M P ITY +M GYC V++A+
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAR 368
Query: 303 DIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGL 362
+IF + + + + M+ C+ EA L + PD TY L
Sbjct: 369 EIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAY 428
Query: 363 CKS 365
K+
Sbjct: 429 TKA 431
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 123/303 (40%), Gaps = 9/303 (2%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAIS-LSHQLD-FTGIS---PDIFTL 75
A+ +F+ + P +N ++T+ + + A+ + LD GI P++ T
Sbjct: 152 AMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTY 211
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
IL+ + ++ ++ + PD TF +M NG ++ + +
Sbjct: 212 NILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRS 271
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
+ D +T+ +LI+ K + Q + + KP + + +I ++ K +++
Sbjct: 272 NECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDK 331
Query: 196 AYNLYSEMLARRVLPDVFTYNALI--YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
A ++ +M +P TY +I YG+C + A ++ +E+ + A T N +
Sbjct: 332 AEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVLKASTLNAM 389
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
++ + G EA + V PD TY L Y + + + M + GI
Sbjct: 390 LEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGI 449
Query: 314 APN 316
PN
Sbjct: 450 VPN 452
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 143/286 (50%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
+ ++ +L + K + L ++ G P+ T LI+ Y + A +V ++
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
+ G +PD +T+ TL+ G + A+ + + A G D TY ++IN L K G
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 160 AALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
AA +L ++ Q P++ Y I++ K + +A LY +M PD TY+ ++
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVK 279
L+EA + EM KN PD + +LVD GK GNV++A M+ G++
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 280 PDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMIN 325
P++ T NSL+ + V+++ +A ++ +M G+ P++ +Y+++++
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 139/304 (45%), Gaps = 15/304 (4%)
Query: 82 YCNQAQITSAFSVLAKILKRG-----------YRPDTITFTTLMKGLCLNGQVQTALQFH 130
YCN I S + + + G R D ++K + G AL F
Sbjct: 295 YCNSGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYG---NALGFF 351
Query: 131 DHVVAQ-GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCK 189
+ Q GF+ D TY ++ L + Q A +L+ ++ +P+ Y +IHS+ +
Sbjct: 352 YWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGR 411
Query: 190 DKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYT 249
+++A N++++M PD TY LI L A + M + PD +T
Sbjct: 412 ANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFT 471
Query: 250 FNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMP 309
++++++ LGK G++ A + M+ QG P+++TYN +MD + A ++ M
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 531
Query: 310 QRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVS 369
G P+ +YSI++ L ++EA + EM KN IPD Y L+D K+G V
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVE 591
Query: 370 HAWE 373
AW+
Sbjct: 592 KAWQ 595
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 151/322 (46%), Gaps = 2/322 (0%)
Query: 47 LVKMKHYPTAISLSHQLDFT-GISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRP 105
L +M Y A+ + L G D T T ++ Q + +L ++++ G +P
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQP 397
Query: 106 DTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLM 165
+T+T+ L+ + A+ + + G + D+VTY LI+ K G A+ +
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 166 RQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIV 225
+++Q + PD Y++II+ K + A+ L+ EM+ + P++ TYN ++
Sbjct: 458 QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKA 517
Query: 226 SQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITY 285
+ A KL +M PD T++I+++ LG G ++EA+ V M ++ PD Y
Sbjct: 518 RNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVY 577
Query: 286 NSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDC 345
L+D + V KA + +M G+ PNV + + +++ + K+ EA LL M
Sbjct: 578 GLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLA 637
Query: 346 KNIIPDTVTYSSLIDGLCKSGR 367
+ P TY+ L+ C GR
Sbjct: 638 LGLRPSLQTYTLLLS-CCTDGR 658
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 137/285 (48%), Gaps = 6/285 (2%)
Query: 99 LKR--GYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMG 156
LKR G++ D T+TT++ L Q + D +V G + + VTY LI+ +
Sbjct: 354 LKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRAN 413
Query: 157 QTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYN 216
A+ + Q+Q KPD Y +I K + A ++Y M A + PD FTY+
Sbjct: 414 YLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYS 473
Query: 217 ALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQ 276
+I L A KL EMV + P+ T+NI++D K N + A + M
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 277 GVKPDIITYNSLMD--GYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVD 334
G +PD +TY+ +M+ G+C E +A+ +F M Q+ P+ Y ++++ K V+
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLE--EAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVE 591
Query: 335 EALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+A M + P+ T +SL+ + +++ A+EL+ +++
Sbjct: 592 KAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 157/346 (45%), Gaps = 14/346 (4%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++A+++FN++ P + + ++ K A+ + ++ G+SPD FT +++
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
INC + +A + +++ +G P+ +T+ +M Q AL+ + + GF
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D+VTY I++ L G A + ++Q + PD +Y +++ + K V A+
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
Y ML + P+V T N+L+ F V+++ EA +LL M+ + P T+ +L+
Sbjct: 596 WYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCC- 654
Query: 259 KEGNVKEAKTVLAVMMKQGVKPD----IITYNSLMDGYCLVSEVNKAKDIFNS---MPQR 311
+G K +M P + + DG + + N D+ +S +R
Sbjct: 655 TDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKR 714
Query: 312 GIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSS 357
G+ V ++ L K+ + +EA ++ KN+ PD + S
Sbjct: 715 GLVDAV------VDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKS 754
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 143/286 (50%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
+ ++ +L + K + L ++ G P+ T LI+ Y + A +V ++
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
+ G +PD +T+ TL+ G + A+ + + A G D TY ++IN L K G
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 160 AALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
AA +L ++ Q P++ Y I++ K + +A LY +M PD TY+ ++
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVK 279
L+EA + EM KN PD + +LVD GK GNV++A M+ G++
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 280 PDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMIN 325
P++ T NSL+ + V+++ +A ++ +M G+ P++ +Y+++++
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 139/304 (45%), Gaps = 15/304 (4%)
Query: 82 YCNQAQITSAFSVLAKILKRG-----------YRPDTITFTTLMKGLCLNGQVQTALQFH 130
YCN I S + + + G R D ++K + G AL F
Sbjct: 295 YCNSGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYG---NALGFF 351
Query: 131 DHVVAQ-GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCK 189
+ Q GF+ D TY ++ L + Q A +L+ ++ +P+ Y +IHS+ +
Sbjct: 352 YWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGR 411
Query: 190 DKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYT 249
+++A N++++M PD TY LI L A + M + PD +T
Sbjct: 412 ANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFT 471
Query: 250 FNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMP 309
++++++ LGK G++ A + M+ QG P+++TYN +MD + A ++ M
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 531
Query: 310 QRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVS 369
G P+ +YSI++ L ++EA + EM KN IPD Y L+D K+G V
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVE 591
Query: 370 HAWE 373
AW+
Sbjct: 592 KAWQ 595
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 151/322 (46%), Gaps = 2/322 (0%)
Query: 47 LVKMKHYPTAISLSHQLDFT-GISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRP 105
L +M Y A+ + L G D T T ++ Q + +L ++++ G +P
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQP 397
Query: 106 DTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLM 165
+T+T+ L+ + A+ + + G + D+VTY LI+ K G A+ +
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 166 RQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIV 225
+++Q + PD Y++II+ K + A+ L+ EM+ + P++ TYN ++
Sbjct: 458 QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKA 517
Query: 226 SQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITY 285
+ A KL +M PD T++I+++ LG G ++EA+ V M ++ PD Y
Sbjct: 518 RNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVY 577
Query: 286 NSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDC 345
L+D + V KA + +M G+ PNV + + +++ + K+ EA LL M
Sbjct: 578 GLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLA 637
Query: 346 KNIIPDTVTYSSLIDGLCKSGR 367
+ P TY+ L+ C GR
Sbjct: 638 LGLRPSLQTYTLLLS-CCTDGR 658
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 137/285 (48%), Gaps = 6/285 (2%)
Query: 99 LKR--GYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMG 156
LKR G++ D T+TT++ L Q + D +V G + + VTY LI+ +
Sbjct: 354 LKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRAN 413
Query: 157 QTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYN 216
A+ + Q+Q KPD Y +I K + A ++Y M A + PD FTY+
Sbjct: 414 YLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYS 473
Query: 217 ALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQ 276
+I L A KL EMV + P+ T+NI++D K N + A + M
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 277 GVKPDIITYNSLMD--GYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVD 334
G +PD +TY+ +M+ G+C E +A+ +F M Q+ P+ Y ++++ K V+
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLE--EAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVE 591
Query: 335 EALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+A M + P+ T +SL+ + +++ A+EL+ +++
Sbjct: 592 KAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 157/346 (45%), Gaps = 14/346 (4%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++A+++FN++ P + + ++ K A+ + ++ G+SPD FT +++
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
INC + +A + +++ +G P+ +T+ +M Q AL+ + + GF
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D+VTY I++ L G A + ++Q + PD +Y +++ + K V A+
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
Y ML + P+V T N+L+ F V+++ EA +LL M+ + P T+ +L+
Sbjct: 596 WYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCC- 654
Query: 259 KEGNVKEAKTVLAVMMKQGVKPD----IITYNSLMDGYCLVSEVNKAKDIFNS---MPQR 311
+G K +M P + + DG + + N D+ +S +R
Sbjct: 655 TDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKR 714
Query: 312 GIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSS 357
G+ V ++ L K+ + +EA ++ KN+ PD + S
Sbjct: 715 GLVDAV------VDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKS 754
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 123/245 (50%), Gaps = 9/245 (3%)
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIII----HSFCKDKLVSDA 196
D Y LI+ + K GQTR A+ L +++ +PD +Y +I H+ K K +
Sbjct: 132 DNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKV 191
Query: 197 YNLYSEMLA-RRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
+M R P+V TYN L+ F ++ + L ++ + PD YTFN ++D
Sbjct: 192 RGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMD 251
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
A GK G +KE + VL M KPDIIT+N L+D Y E K + F S+ + P
Sbjct: 252 AYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKP 311
Query: 316 NVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLI--DGLCKSGRVSHAWE 373
+ +++ MI K + +D+A + +M+ N IP +TY +I G C G VS A E
Sbjct: 312 TLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRARE 369
Query: 374 LVDDV 378
+ ++V
Sbjct: 370 IFEEV 374
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 129/277 (46%), Gaps = 15/277 (5%)
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
+R Y PD ++ L+ + GQ + A+ + G R D Y LI TR
Sbjct: 126 QRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHL---HTR 182
Query: 160 AALQLMRQIQGQLVK--------PDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPD 211
+ + +++G L K P+V Y I++ +F + V L+ ++ V PD
Sbjct: 183 DKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPD 242
Query: 212 VFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLA 271
V+T+N ++ + +KE +L M + PD TFN+L+D+ GK+ ++ +
Sbjct: 243 VYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFK 302
Query: 272 VMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYS--IMINGLCK 329
+M+ KP + T+NS++ Y ++KA+ +F M P+ +Y IM+ G C
Sbjct: 303 SLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCG 362
Query: 330 TKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
+ V A + E+ + + T +++++ C++G
Sbjct: 363 S--VSRAREIFEEVGESDRVLKASTLNAMLEVYCRNG 397
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 124/303 (40%), Gaps = 9/303 (2%)
Query: 70 PDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQ- 128
PD + LI+ + Q A + +++ G RPD + L+ AL+
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 129 ---FHDHVVA-QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIII 184
+ D + + + + VTY IL+ + G+ L + + V PDV + ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 185 HSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIH 244
++ K+ ++ + + + M + PD+ T+N LI + + ++ + ++
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 245 PDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNS--LMDGYCLVSEVNKAK 302
P TFN ++ GK + +A+ V M P ITY +M GYC V++A+
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAR 368
Query: 303 DIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGL 362
+IF + + + + M+ C+ EA L + PD TY L
Sbjct: 369 EIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAY 428
Query: 363 CKS 365
K+
Sbjct: 429 TKA 431
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 123/303 (40%), Gaps = 9/303 (2%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAIS-LSHQLD-FTGIS---PDIFTL 75
A+ +F+ + P +N ++T+ + + A+ + LD GI P++ T
Sbjct: 152 AMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTY 211
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
IL+ + ++ ++ + PD TF +M NG ++ + +
Sbjct: 212 NILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRS 271
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
+ D +T+ +LI+ K + Q + + KP + + +I ++ K +++
Sbjct: 272 NECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDK 331
Query: 196 AYNLYSEMLARRVLPDVFTYNALI--YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
A ++ +M +P TY +I YG+C + A ++ +E+ + A T N +
Sbjct: 332 AEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVLKASTLNAM 389
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
++ + G EA + V PD TY L Y + + + M + GI
Sbjct: 390 LEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGI 449
Query: 314 APN 316
PN
Sbjct: 450 VPN 452
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 148/311 (47%), Gaps = 2/311 (0%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
N+++ K+ A + + + G +P+ T + + C ++ + A SV K+L
Sbjct: 234 LNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKML 293
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKM-GQT 158
K G + ++ C G+ + A ++ + L LI LCK G
Sbjct: 294 KSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTI 353
Query: 159 RAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNAL 218
A +++ + G+ + ++ ++ +IHS C+ + V DA L +M+++ P +N +
Sbjct: 354 TFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLV 413
Query: 219 IYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGV 278
++ L EA ++L M ++ + PD YT+ +++ K G + EA+ +LA K+
Sbjct: 414 VHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHK 473
Query: 279 KPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLC-KTKKVDEAL 337
K +TY++L+ GYC + E ++A + N M + G+ PN Y+ +I C K ++A
Sbjct: 474 KLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAE 533
Query: 338 NLLAEMDCKNI 348
L EM K +
Sbjct: 534 VLFEEMKQKGL 544
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 137/290 (47%), Gaps = 1/290 (0%)
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
L LI + + +AF V +K + G+ P+ T+ ++ LC + A + ++
Sbjct: 234 LNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKML 293
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCK-DKLV 193
G + +I CK G+ A + + + +I + CK D +
Sbjct: 294 KSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTI 353
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
+ A + ++ + ++ +I+ C + +K+A LL +M++K P FN++
Sbjct: 354 TFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLV 413
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
V A K G++ EAK VL +M +G+KPD+ TY ++ GY +++A++I ++
Sbjct: 414 VHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHK 473
Query: 314 APNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLC 363
+ +Y +I G CK ++ DEAL LL EMD + P+ Y+ LI C
Sbjct: 474 KLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFC 523
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 152/328 (46%), Gaps = 8/328 (2%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A +F++ TP + L +L K A S+ ++ +G+ + + +I
Sbjct: 250 AFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIIT 309
Query: 81 CYCNQAQITSAFSV--LAKILKRGYRPDTITFTTLMKGLCLN-GQVQTALQFHDHVVAQG 137
+C + + A+SV LAK ++ P + TL+ LC N G + A + + +
Sbjct: 310 WFCKEGKAEEAYSVYELAKTKEKSLPPRFV--ATLITALCKNDGTITFAQEMLGDLSGEA 367
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
R + +I+ LC+M + A L+ + + P ++ +++H+ K + +A
Sbjct: 368 RRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAK 427
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
+ M +R + PDV+TY +I G+ + EA ++L E K+ T++ L+
Sbjct: 428 EVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGY 487
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVS-EVNKAKDIFNSMPQRGIAPN 316
K EA +L M + GV+P+ YN L+ +CL + + KA+ +F M Q+G+ N
Sbjct: 488 CKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLN 547
Query: 317 VHSYSIM--INGLCKTKKVDEALNLLAE 342
S ++ + + KV E NLLAE
Sbjct: 548 AISQGLIRAVKEMESEAKVTEDGNLLAE 575
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 125/266 (46%), Gaps = 15/266 (5%)
Query: 121 GQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMY 180
G+ + A GF + TY + + LCK A + ++ V + E
Sbjct: 245 GKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQM 304
Query: 181 TIIIHSFCKDKLVSDAYNLYSEMLAR---RVLPDVFTYNALIYGFC-----IVSQLKEAT 232
II FCK+ +AY++Y LA+ + LP F LI C I +
Sbjct: 305 GNIITWFCKEGKAEEAYSVYE--LAKTKEKSLPPRFVAT-LITALCKNDGTITFAQEMLG 361
Query: 233 KLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGY 292
L E + I P F+ ++ +L + NVK+AK +L M+ +G P +N ++
Sbjct: 362 DLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHAC 417
Query: 293 CLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDT 352
++++AK++ M RG+ P+V++Y+++I+G K +DEA +LAE K+
Sbjct: 418 SKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSP 477
Query: 353 VTYSSLIDGLCKSGRVSHAWELVDDV 378
VTY +LI G CK A +L++++
Sbjct: 478 VTYHALIRGYCKIEEYDEALKLLNEM 503
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 64/139 (46%)
Query: 15 IRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFT 74
+RN DA ++ ++ P P FN ++ + K A + ++ G+ PD++T
Sbjct: 385 MRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYT 444
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
T++I+ Y + A +LA+ K+ + +T+ L++G C + AL+ + +
Sbjct: 445 YTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMD 504
Query: 135 AQGFRLDQVTYRILINGLC 153
G + + Y LI C
Sbjct: 505 RFGVQPNADEYNKLIQSFC 523
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 161/344 (46%), Gaps = 17/344 (4%)
Query: 37 IIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIF---TLTILINCYCNQAQITSAFS 93
+ E++ +++ L KM+ + TA +L ++ SP + TL I+I YC + A +
Sbjct: 161 VREYHSMISILGKMRKFDTAWTLIDEM--RKFSPSLVNSQTLLIMIRKYCAVHDVGKAIN 218
Query: 94 VLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV---AQGFRLDQVTYRILIN 150
+ F +L+ LC V A H++ + D ++ I++N
Sbjct: 219 TFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDA----GHLIFCNKDKYPFDAKSFNIVLN 274
Query: 151 GLCK-MGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVL 209
G C +G R A ++ ++ VK DV Y+ +I + K ++ L+ M +
Sbjct: 275 GWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIE 334
Query: 210 PDVFTYNALIYGFCIVSQLKEATKLLDEMVT-KNIHPDAYTFNILVDALGKEGNVKEAKT 268
PD YNA+++ S + EA L+ M K I P+ T+N L+ L K +EAK
Sbjct: 335 PDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQ 394
Query: 269 VLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLC 328
V M+++G+ P I TY++ M ++ + ++ M + G P V +Y ++I LC
Sbjct: 395 VFDEMLEKGLFPTIRTYHAFMR---ILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLC 451
Query: 329 KTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAW 372
+ + D L L EM K + PD +Y +I GL +G++ A+
Sbjct: 452 RWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAY 495
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 125/250 (50%), Gaps = 10/250 (4%)
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQL---MRQIQGQLVKPDVEMYTIIIHSFCKDKL 192
QG+ Y +I+ L KM + A L MR+ LV + + I+I +C
Sbjct: 155 QGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLV--NSQTLLIMIRKYCAVHD 212
Query: 193 VSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHP-DAYTFN 251
V A N + ++ + + +L+ C + +A L+ K+ +P DA +FN
Sbjct: 213 VGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI--FCNKDKYPFDAKSFN 270
Query: 252 ILVDALGKE-GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQ 310
I+++ G+ +EA+ V M GVK D+++Y+S++ Y +NK +F+ M +
Sbjct: 271 IVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK 330
Query: 311 RGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM-DCKNIIPDTVTYSSLIDGLCKSGRVS 369
I P+ Y+ +++ L K V EA NL+ M + K I P+ VTY+SLI LCK+ +
Sbjct: 331 ECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTE 390
Query: 370 HAWELVDDVI 379
A ++ D+++
Sbjct: 391 EAKQVFDEML 400
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 159/361 (44%), Gaps = 6/361 (1%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+DA ++F+ +L+ + FN ++ + H A SL +++ GISPD T IL
Sbjct: 322 NDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNIL 381
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
++ + + I +A KI K G PDT+T ++ LC V +
Sbjct: 382 LSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSI 441
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
R+D+ + +++ G A L + Q V + +I + + L +A
Sbjct: 442 RIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTL-AAVIDVYAEKGLWVEAET 500
Query: 199 LY---SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
++ M +R DV YN +I + ++A L M + PD T+N L
Sbjct: 501 VFYGKRNMSGQR--NDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQ 558
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
L V EA+ +LA M+ G KP TY +++ Y + ++ A D++ +M + G+ P
Sbjct: 559 MLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKP 618
Query: 316 NVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
N Y +ING ++ V+EA+ M+ + + + +SLI K G + A +
Sbjct: 619 NEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVY 678
Query: 376 D 376
D
Sbjct: 679 D 679
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 138/307 (44%), Gaps = 2/307 (0%)
Query: 74 TLTILINCYCNQAQITSAFSVL-AKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDH 132
TL +I+ Y + A +V K G R D + + ++K + AL
Sbjct: 481 TLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKG 540
Query: 133 VVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKL 192
+ QG D+ TY L L + A +++ ++ KP + Y +I S+ + L
Sbjct: 541 MKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGL 600
Query: 193 VSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNI 252
+SDA +LY M V P+ Y +LI GF ++EA + M + +
Sbjct: 601 LSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTS 660
Query: 253 LVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG 312
L+ A K G ++EA+ V M PD+ NS++ + V++A+ IFN++ ++G
Sbjct: 661 LIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG 720
Query: 313 IAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAW 372
+V S++ M+ +DEA+ + EM ++ D +++ ++ G++S
Sbjct: 721 TC-DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECC 779
Query: 373 ELVDDVI 379
EL +++
Sbjct: 780 ELFHEML 786
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 151/335 (45%), Gaps = 23/335 (6%)
Query: 25 FNRLLRM--------SPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
+ R+LR+ S P +I +N +L +L + + ++ G+ P T
Sbjct: 125 WERVLRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYG 184
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
+L++ Y + A + + +R + PD +T T+++ +G+ A +F A
Sbjct: 185 MLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAG 244
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
LD + I+ K G ++ + L + + +L K V I +K + A
Sbjct: 245 KVDLDLDS----IDDFPKNGSAQSPVNLKQFLSMELFK--VGARNPI------EKSLHFA 292
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
S R+ T+N LI + +L +A L EM+ + D TFN ++
Sbjct: 293 SGSDSSPRKPRLTS---TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHT 349
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
G G++ EA+++L M ++G+ PD TYN L+ + ++ A + + + + G+ P+
Sbjct: 350 CGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPD 409
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPD 351
++ +++ LC+ K V E ++AEMD +I D
Sbjct: 410 TVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRID 444
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 123/272 (45%), Gaps = 1/272 (0%)
Query: 37 IIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLA 96
++E+N ++ + K K + A+SL + G PD T L + A +LA
Sbjct: 515 VLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILA 574
Query: 97 KILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMG 156
++L G +P T+ ++ G + A+ ++ + G + ++V Y LING + G
Sbjct: 575 EMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESG 634
Query: 157 QTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYN 216
A+Q R ++ V+ + + T +I ++ K + +A +Y +M PDV N
Sbjct: 635 MVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASN 694
Query: 217 ALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQ 276
+++ + + EA + + + K D +F ++ G + EA V M +
Sbjct: 695 SMLSLCADLGIVSEAESIFNALREKGT-CDVISFATMMYLYKGMGMLDEAIEVAEEMRES 753
Query: 277 GVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM 308
G+ D ++N +M Y ++++ ++F+ M
Sbjct: 754 GLLSDCTSFNQVMACYAADGQLSECCELFHEM 785
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 136/309 (44%), Gaps = 2/309 (0%)
Query: 64 DFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQV 123
+ +G D+ ++I Y A S+ + +G PD T+ +L + L V
Sbjct: 507 NMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLV 566
Query: 124 QTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTII 183
A + ++ G + TY +I ++G A+ L ++ VKP+ +Y +
Sbjct: 567 DEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSL 626
Query: 184 IHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNI 243
I+ F + +V +A + M V + +LI + V L+EA ++ D+M
Sbjct: 627 INGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEG 686
Query: 244 HPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKD 303
PD N ++ G V EA+++ + ++G D+I++ ++M Y + +++A +
Sbjct: 687 GPDVAASNSMLSLCADLGIVSEAESIFNALREKGT-CDVISFATMMYLYKGMGMLDEAIE 745
Query: 304 IFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDC-KNIIPDTVTYSSLIDGL 362
+ M + G+ + S++ ++ ++ E L EM + ++ D T+ +L L
Sbjct: 746 VAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLL 805
Query: 363 CKSGRVSHA 371
K G S A
Sbjct: 806 KKGGVPSEA 814
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/393 (20%), Positives = 160/393 (40%), Gaps = 53/393 (13%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+ A+S+F + P +N + L + A + ++ +G P T +
Sbjct: 532 EKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAM 591
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I Y ++ A + + K G +P+ + + +L+ G +G V+ A+Q+ + G
Sbjct: 592 IASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGV 651
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKD-KLVSDAY 197
+ + + LI K+G A ++ +++ PDV ++ S C D +VS+A
Sbjct: 652 QSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSML-SLCADLGIVSEAE 710
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
++++ L + DV ++ ++Y + + L EA ++ +EM + D +FN ++
Sbjct: 711 SIFN-ALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACY 769
Query: 258 GKEGNVKEA--------------------KTVLAVMMKQGVKPDIITYNSLMDGYCLVSE 297
+G + E KT+ ++ K GV + ++ L +
Sbjct: 770 AADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQ--------LQTA 821
Query: 298 VNKAK---------DIFNSMP------------QRGIAPNVH-SYSIMINGLCKTKKVDE 335
N+AK +F++M G P H +Y+ +I + +D
Sbjct: 822 YNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDM 881
Query: 336 ALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRV 368
AL M K + PD VT + L+ K+G V
Sbjct: 882 ALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMV 914
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 69/122 (56%)
Query: 249 TFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM 308
TFN L+D GK G + +A + + M+K GV D +T+N+++ +++A+ + M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 309 PQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRV 368
++GI+P+ +Y+I+++ ++ AL ++ + PDTVT+ +++ LC+ V
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 369 SH 370
+
Sbjct: 427 AE 428
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 113/275 (41%), Gaps = 4/275 (1%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++A +++++ P + N +L+ + A S+ + L G D+ + +
Sbjct: 672 EEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTC-DVISFATM 730
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQ-FHDHVVAQG 137
+ Y + A V ++ + G D +F +M +GQ+ + FH+ +V +
Sbjct: 731 MYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERK 790
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
LD T++ L L K G A+ ++ + KP + I F L + A
Sbjct: 791 LLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNE-AKP-LATPAITATLFSAMGLYAYAL 848
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
E+ + + + F YNA+IY + + A K M K + PD T LV
Sbjct: 849 ESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIY 908
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGY 292
GK G V+ K V + + ++P + ++ D Y
Sbjct: 909 GKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDAY 943
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 139/290 (47%), Gaps = 6/290 (2%)
Query: 67 GISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA 126
GI D+ L+ C + A ++ +R + D ++ G C+ G V A
Sbjct: 208 GIDDDLVAFHGLLMWLCRYKHVEFAETLFCS-RRREFGCDIKAMNMILNGWCVLGNVHEA 266
Query: 127 LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS 186
+F ++A R D V+Y +IN L K G+ A++L R + PDV++ +I +
Sbjct: 267 KRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDA 326
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTK--NIH 244
C K + +A ++ E+ + P+V TYN+L+ C + + ++ +L++EM K +
Sbjct: 327 LCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCS 386
Query: 245 PDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDI 304
P+ TF+ L L K+ VL M K + YN + Y + K ++I
Sbjct: 387 PNDVTFSYL---LKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREI 443
Query: 305 FNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVT 354
++ M + G+ P+ +Y+I I+GL K+ EAL+ EM K ++P+ T
Sbjct: 444 WSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 122/244 (50%), Gaps = 6/244 (2%)
Query: 121 GQVQTALQFH---DHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDV 177
G+++ +FH D + + +++ TY +L+N + A+ + + + + D+
Sbjct: 154 GKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDL 213
Query: 178 EMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDE 237
+ ++ C+ K V A L+ R D+ N ++ G+C++ + EA + +
Sbjct: 214 VAFHGLLMWLCRYKHVEFAETLFCSR-RREFGCDIKAMNMILNGWCVLGNVHEAKRFWKD 272
Query: 238 MVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSE 297
++ PD ++ +++AL K+G + +A + M PD+ N+++D C
Sbjct: 273 IIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKR 332
Query: 298 VNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCK--NIIPDTVTY 355
+ +A ++F + ++G PNV +Y+ ++ LCK ++ ++ L+ EM+ K + P+ VT+
Sbjct: 333 IPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTF 392
Query: 356 SSLI 359
S L+
Sbjct: 393 SYLL 396
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 142/335 (42%), Gaps = 8/335 (2%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
+N+IL L KM+ + + ++ + T +L+N Y ++ A V +
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
+ G D + F L+ LC V+ A + F D +++NG C +G
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRRE-FGCDIKAMNMILNGWCVLGNVH 264
Query: 160 AALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
A + + I +PDV Y +I++ K + A LY M R PDV N +I
Sbjct: 265 EAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVI 324
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQG-- 277
C ++ EA ++ E+ K P+ T+N L+ L K ++ ++ M +G
Sbjct: 325 DALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGS 384
Query: 278 VKPDIITYNSLMDGYCLVSEVNKAKDI-FNSMPQRGIAPNVHSYSIMINGLCKTKKVDEA 336
P+ +T++ L+ S+ +K DI M + Y++M + K ++
Sbjct: 385 CSPNDVTFSYLLK----YSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKV 440
Query: 337 LNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
+ +EM+ + PD TY+ I GL G++ A
Sbjct: 441 REIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEA 475
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 117/247 (47%), Gaps = 2/247 (0%)
Query: 133 VVAQGFRLDQ-VTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDK 191
VV Q L + Y +++ L KM + Q+ ++ + + + Y ++++ +
Sbjct: 133 VVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAH 192
Query: 192 LVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFN 251
V +A ++ + D+ ++ L+ C ++ A L + D N
Sbjct: 193 KVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSR-RREFGCDIKAMN 251
Query: 252 ILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQR 311
++++ GNV EAK ++ +PD+++Y ++++ ++ KA +++ +M
Sbjct: 252 MILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDT 311
Query: 312 GIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
P+V + +I+ LC K++ EAL + E+ K P+ VTY+SL+ LCK R
Sbjct: 312 RRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKV 371
Query: 372 WELVDDV 378
WELV+++
Sbjct: 372 WELVEEM 378
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 103/235 (43%), Gaps = 5/235 (2%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N +A + ++ P ++ + ++ +L K A+ L + T +PD+
Sbjct: 262 NVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICN 321
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
+I+ C + +I A V +I ++G P+ +T+ +L+K LC + + + + + +
Sbjct: 322 NVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELK 381
Query: 137 GFRL--DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
G + VT+ L+ + L+ M + + ++ ++Y ++ + +
Sbjct: 382 GGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTS---DLYNLMFRLYVQWDKEE 438
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYT 249
++SEM + PD TY I+G ++ EA EM++K + P+ T
Sbjct: 439 KVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 150/331 (45%), Gaps = 4/331 (1%)
Query: 70 PDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQF 129
P+I +L++ C + ++L ++ R +PD TF L G C + A++
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKL 290
Query: 130 HDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQI--QGQLVK-PDVEMYTIIIHS 186
+ ++ G + + TY I+ C+ G A L + +G V P + + ++I +
Sbjct: 291 LEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVA 350
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
K+ + + L M++ LPDV TY +I G C+ ++ EA K LDEM K PD
Sbjct: 351 LAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPD 410
Query: 247 AYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFN 306
T+N + L + EA + M++ P + TYN L+ + + + + A + +
Sbjct: 411 IVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWT 470
Query: 307 SMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
M +R +V +Y MINGL + EA LL E+ K + + S + L + G
Sbjct: 471 EMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVG 530
Query: 367 RVSHAWELVDDVIFIFNVWMSYAKAIKLTRQ 397
+ ++ + + +N M+ A+ R+
Sbjct: 531 NLKAIHKVSEHMKKFYNHSMARRFALSEKRK 561
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 120/287 (41%), Gaps = 38/287 (13%)
Query: 27 RLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQA 86
R +R P FN + +++ A+ L ++ G P+ FT I+ +C
Sbjct: 258 RRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAG 317
Query: 87 QITSA--------------------------------------FSVLAKILKRGYRPDTI 108
+ A F ++ +++ G PD
Sbjct: 318 MVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVS 377
Query: 109 TFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQI 168
T+ +++G+C+ +V A +F D + +G+ D VTY + LC+ +T AL+L ++
Sbjct: 378 TYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRM 437
Query: 169 QGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQL 228
P V+ Y ++I F + A+N ++EM R + DV TY A+I G +
Sbjct: 438 VESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRA 497
Query: 229 KEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMK 275
KEA LL+E+V K + F+ + L + GN+K V M K
Sbjct: 498 KEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMKK 544
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 158/353 (44%), Gaps = 12/353 (3%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P I N +L + ++ Y + L ++ GI+P+I T ++ Y + + A
Sbjct: 128 PTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEH 187
Query: 95 LAKILKRG-YRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLC 153
+ P TF L+KGL N ++ A++ + + +GF +D V Y L+ G
Sbjct: 188 YKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCV 247
Query: 154 KMGQTRAALQLMRQIQGQLVK--PDVEMYTIIIHSFCKDKLVSDAYNLYSEMLAR--RVL 209
K L+L ++++ +L D +Y ++ + ++ +A Y E + +V
Sbjct: 248 KNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVR 307
Query: 210 PDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAY------TFNILVDALGKEGNV 263
YN ++ + EA KL D V K +P + TFN++V+ G
Sbjct: 308 MSAMAYNYVLEALSENGKFDEALKLFD-AVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKF 366
Query: 264 KEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIM 323
+EA V M PD +++N+LM+ C + +A+ ++ M ++ + P+ ++Y ++
Sbjct: 367 EEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLL 426
Query: 324 INGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
++ K K+DE M N+ P+ Y+ L D L K+G++ A D
Sbjct: 427 MDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFD 479
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 175/380 (46%), Gaps = 24/380 (6%)
Query: 15 IRNADDAVSIFNRLLRMSP-TPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTG--ISPD 71
+R + A+ + + +P P I F ++ LV + A+ + + G + P
Sbjct: 178 VRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPV 237
Query: 72 IFTLTILINCYCNQAQ--ITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQF 129
+++ +++ C N + + L + L G+ D + + LMKG + + A++
Sbjct: 238 VYSY-LMMGCVKNSDADGVLKLYQELKEKLG-GFVDDGVVYGQLMKGYFMKEMEKEAMEC 295
Query: 130 HDHVVAQG--FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKP-----DVEMYTI 182
++ V + R+ + Y ++ L + G+ AL+L ++ + P ++ + +
Sbjct: 296 YEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNV 355
Query: 183 IIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKN 242
+++ +C +A ++ +M + PD ++N L+ C L EA KL EM KN
Sbjct: 356 MVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKN 415
Query: 243 IHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAK 302
+ PD YT+ +L+D KEG + E M++ ++P++ YN L D +++ AK
Sbjct: 416 VKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAK 475
Query: 303 DIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLI--- 359
F+ M + + + +Y ++ L + ++DE L ++ EM + DTV S +
Sbjct: 476 SFFDMMVSK-LKMDDEAYKFIMRALSEAGRLDEMLKIVDEM----LDDDTVRVSEELQEF 530
Query: 360 --DGLCKSGRVSHAWELVDD 377
+ L K GR +L+++
Sbjct: 531 VKEELRKGGREGDLEKLMEE 550
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 147/319 (46%), Gaps = 14/319 (4%)
Query: 65 FTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQ 124
++ P IFT+ ++ QA+ + + I + G P+ IT+ + + + +
Sbjct: 123 YSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPE 182
Query: 125 TALQFHDHVVAQG-FRLDQVTYRILINGLCKMGQTRAALQLMRQ--IQGQLVKPDVEMYT 181
AL+ + + T+RIL+ GL A+++ ++G +V P V Y+
Sbjct: 183 IALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVV--YS 240
Query: 182 IIIHSFCKDKLVSDAYNLYSEMLAR--RVLPDVFTYNALIYGFCIVSQLKEATKLLDEMV 239
++ K+ LY E+ + + D Y L+ G+ + KEA + +E V
Sbjct: 241 YLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAV 300
Query: 240 TKN--IHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKP-----DIITYNSLMDGY 292
+N + A +N +++AL + G EA + + K+ P ++ T+N +++GY
Sbjct: 301 GENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGY 360
Query: 293 CLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDT 352
C + +A ++F M +P+ S++ ++N LC + + EA L EM+ KN+ PD
Sbjct: 361 CAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDE 420
Query: 353 VTYSSLIDGLCKSGRVSHA 371
TY L+D K G++
Sbjct: 421 YTYGLLMDTCFKEGKIDEG 439
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 150/328 (45%), Gaps = 5/328 (1%)
Query: 41 NKILTSLVKMKHYPTAISLSHQLDFT-GISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
+K++ L K Y A+ +++ + G+ D + L++ + I A V K+
Sbjct: 207 SKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLF 266
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
+PD TF L+ G C + A D + F D VTY + CK G R
Sbjct: 267 D-TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFR 325
Query: 160 AALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
+++ +++ P+V YTI++HS K K V++A +Y +M +PD Y++LI
Sbjct: 326 RVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLI 385
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMK---Q 276
+ + K+A ++ ++M + + D +N ++ A + A +L M +
Sbjct: 386 HILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGE 445
Query: 277 GVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEA 336
P++ TY L+ C ++ + + M + ++ +V +Y ++I GLC + KV+EA
Sbjct: 446 SCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEA 505
Query: 337 LNLLAEMDCKNIIPDTVTYSSLIDGLCK 364
E K ++P T L+D L K
Sbjct: 506 CLFFEEAVRKGMVPRDSTCKMLVDELEK 533
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 119/255 (46%), Gaps = 5/255 (1%)
Query: 109 TFTTLMKGLCLNGQVQTALQ-FHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQ 167
T + +M+ L +G+ A+ F + + G + D + L++ L K A ++ +
Sbjct: 205 TMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLK 264
Query: 168 IQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQ 227
+ +KPD + I+IH FCK + DA + M PDV TY + + +C
Sbjct: 265 L-FDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGD 323
Query: 228 LKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNS 287
+ ++L+EM +P+ T+ I++ +LGK V EA V M + G PD Y+S
Sbjct: 324 FRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSS 383
Query: 288 LMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM---D 344
L+ A +IF M +G+ +V Y+ MI+ + + AL LL M +
Sbjct: 384 LIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEE 443
Query: 345 CKNIIPDTVTYSSLI 359
++ P+ TY+ L+
Sbjct: 444 GESCSPNVETYAPLL 458
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 122/251 (48%), Gaps = 24/251 (9%)
Query: 148 LINGLCKMGQTR-AALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLAR 206
L+N + K +++ L M ++ +L K Y + +F + + +Y + ++ +A
Sbjct: 188 LVNEMNKNEESKLVTLDTMSKVMRRLAKSG--KYNKAVDAFLE---MEKSYGVKTDTIAM 242
Query: 207 RVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEA 266
L D AL+ I + KL D I PDA TFNIL+ K +A
Sbjct: 243 NSLMD-----ALVKENSIEHAHEVFLKLFD-----TIKPDARTFNILIHGFCKARKFDDA 292
Query: 267 KTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMING 326
+ ++ +M PD++TY S ++ YC + + ++ M + G PNV +Y+I+++
Sbjct: 293 RAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHS 352
Query: 327 LCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV-------- 378
L K+K+V EAL + +M +PD YSSLI L K+GR A E+ +D+
Sbjct: 353 LGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRD 412
Query: 379 IFIFNVWMSYA 389
+ ++N +S A
Sbjct: 413 VLVYNTMISAA 423
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 122/255 (47%), Gaps = 4/255 (1%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
R DDA ++ + + TP ++ + + + K + + ++ G +P++ T
Sbjct: 287 RKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTY 346
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
TI+++ Q+ A V K+ + G PD +++L+ L G+ + A + + +
Sbjct: 347 TIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTN 406
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQI---QGQLVKPDVEMYTIIIHSFCKDKL 192
QG R D + Y +I+ + AL+L++++ +G+ P+VE Y ++ C K
Sbjct: 407 QGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKK 466
Query: 193 VSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNI 252
+ L M+ V DV TY LI G C+ +++EA +E V K + P T +
Sbjct: 467 MKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKM 526
Query: 253 LVDALGKEGNVKEAK 267
LVD L K+ N+ EAK
Sbjct: 527 LVDELEKK-NMAEAK 540
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 106/225 (47%), Gaps = 2/225 (0%)
Query: 152 LCKMGQTRAALQLMRQIQGQL-VKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLP 210
L K G+ A+ +++ VK D ++ + K+ + A+ ++ ++ + P
Sbjct: 213 LAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT-IKP 271
Query: 211 DVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVL 270
D T+N LI+GFC + +A ++D M PD T+ V+A KEG+ + +L
Sbjct: 272 DARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEML 331
Query: 271 AVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKT 330
M + G P+++TY +M +V +A ++ M + G P+ YS +I+ L KT
Sbjct: 332 EEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKT 391
Query: 331 KKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
+ +A + +M + + D + Y+++I R A L+
Sbjct: 392 GRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLL 436
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 149/313 (47%), Gaps = 3/313 (0%)
Query: 70 PDIFTLTILINCYCNQAQ-ITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQ 128
P +TL L+ + Q + +L K + G R + TF L+ LC G+V A +
Sbjct: 141 PSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCATE 200
Query: 129 FHDHVVAQGFRLDQVTYRILINGLCKMGQTRA--ALQLMRQIQGQLVKPDVEMYTIIIHS 186
++ +D Y L++ +CK + + + ++ P + YT+++
Sbjct: 201 LVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRF 260
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
+ + ++ ++M RV PD+ Y ++ G +A KL DE++ + PD
Sbjct: 261 LVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPD 320
Query: 247 AYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFN 306
YT+N+ ++ L K+ +++ A +++ M K G +P+++TYN L+ ++++AK ++
Sbjct: 321 VYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWK 380
Query: 307 SMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
M G+ N H++ IMI+ + +V A LL E N+ + +I LC+ G
Sbjct: 381 EMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKG 440
Query: 367 RVSHAWELVDDVI 379
+ A EL+ ++
Sbjct: 441 LMDQAVELLAHLV 453
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 107/234 (45%), Gaps = 2/234 (0%)
Query: 40 FNKILTSLVKMKHYPT--AISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAK 97
++++L+S+ K K I L T SP + T+++ + SVL +
Sbjct: 217 YSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQ 276
Query: 98 ILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQ 157
+ PD + +T +++G+ + A + D ++ G D TY + INGLCK
Sbjct: 277 MKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQND 336
Query: 158 TRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNA 217
AL++M + +P+V Y I+I + K +S A L+ EM V + T++
Sbjct: 337 IEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDI 396
Query: 218 LIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLA 271
+I + V ++ A LL+E N+ + ++ L ++G + +A +LA
Sbjct: 397 MISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLA 450
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 123/266 (46%), Gaps = 32/266 (12%)
Query: 144 TYRILINGLCKMGQTR--AALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYS 201
YR +I L K Q +++ ++ + P+ ++ +I ++ + +A ++
Sbjct: 74 AYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPE-SIFRDVIAAYGFSGRIEEAIEVFF 132
Query: 202 EMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTK----NIHPDAYTFNILVDAL 257
++ R +P +T NAL+ ++ + +++ +L+ E++ K + + TF IL+DAL
Sbjct: 133 KIPNFRCVPSAYTLNALLL---VLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDAL 189
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKD--------IFNSMP 309
+ G V A ++ M + V D Y+ L+ C K KD +
Sbjct: 190 CRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVC------KHKDSSCFDVIGYLEDLR 243
Query: 310 QRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVS 369
+ +P + Y++++ L + + E +++L +M C + PD V Y+ ++ G+
Sbjct: 244 KTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYP 303
Query: 370 HAWELVDDV--------IFIFNVWMS 387
A +L D++ ++ +NV+++
Sbjct: 304 KADKLFDELLLLGLAPDVYTYNVYIN 329
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 91/220 (41%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
D + L + +P + ++ ++ LV+ +S+ +Q+ + PD+ TI++
Sbjct: 234 DVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVL 293
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
A + ++L G PD T+ + GLC ++ AL+ + G
Sbjct: 294 QGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSE 353
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
+ VTY ILI L K G A L ++++ V + + I+I ++ + V A+ L
Sbjct: 354 PNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGL 413
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMV 239
E V +I C + +A +LL +V
Sbjct: 414 LEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 110/206 (53%)
Query: 173 VKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEAT 232
++PD+E Y +I FC+ S +Y++ +EM + + P+ ++ +I GF + E
Sbjct: 183 IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVG 242
Query: 233 KLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGY 292
K+L M + ++ T+NI + +L K KEAK +L M+ G+KP+ +TY+ L+ G+
Sbjct: 243 KVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGF 302
Query: 293 CLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDT 352
C + +AK +F M RG P+ Y +I LCK + AL+L E KN +P
Sbjct: 303 CNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSF 362
Query: 353 VTYSSLIDGLCKSGRVSHAWELVDDV 378
SL++GL K +V A EL+ V
Sbjct: 363 SIMKSLVNGLAKDSKVEEAKELIGQV 388
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 131/294 (44%), Gaps = 36/294 (12%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQL-DFTGISPDIFTLTI 77
D ++ +F L + + + N +L + + K Y A + ++ GI PD+ T
Sbjct: 133 DHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNR 192
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
+I +C +S++S++A++ ++G +P++ +F
Sbjct: 193 MIKVFCESGSASSSYSIVAEMERKGIKPNSSSFG-------------------------- 226
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
++I+G ++ +++ ++ + V V Y I I S CK K +A
Sbjct: 227 ---------LMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAK 277
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
L ML+ + P+ TY+ LI+GFC +EA KL MV + PD+ + L+ L
Sbjct: 278 ALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYL 337
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQR 311
K G+ + A ++ M++ P SL++G S+V +AK++ + ++
Sbjct: 338 CKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 106/241 (43%), Gaps = 20/241 (8%)
Query: 157 QTRAALQLMRQ----------IQGQLVKPDVEM----YTIIIHSFCKDKLVSDAYNLYSE 202
+++AAL L++ + + PD + ++ + + + K S NL
Sbjct: 46 KSKAALSLLKSEKDPDRILEICRAASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDG 105
Query: 203 MLARRVLPDVFTYNALIYGFCIVSQ---LKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+ R PD+ + + + +Q L + ++ ++ I + N L+ A
Sbjct: 106 FIENR--PDLKSERFAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLV 163
Query: 260 EGNVKEAKTVLAVMMKQ-GVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
+ KEAK V M K G++PD+ TYN ++ +C + + I M ++GI PN
Sbjct: 164 AKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSS 223
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
S+ +MI+G K DE +LA M + + TY+ I LCK + A L+D +
Sbjct: 224 SFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGM 283
Query: 379 I 379
+
Sbjct: 284 L 284
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 124/251 (49%), Gaps = 5/251 (1%)
Query: 98 ILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR---LDQVTYRILINGLCK 154
+L + + PD+ +TTLMKG NG+V + + + Q R D+VTY +++
Sbjct: 405 LLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVN 464
Query: 155 MGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARR-VLPDVF 213
G A Q++ ++ V + Y +++ +CK + A +L EM + PDV
Sbjct: 465 AGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVV 524
Query: 214 TYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVM 273
+YN +I G ++ A +EM T+ I P ++ L+ A G K A V M
Sbjct: 525 SYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEM 584
Query: 274 MKQG-VKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKK 332
M VK D+I +N L++GYC + + A+ + + M + G PNV +Y + NG+ + +K
Sbjct: 585 MNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARK 644
Query: 333 VDEALNLLAEM 343
+AL L E+
Sbjct: 645 PGDALLLWKEI 655
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 150/354 (42%), Gaps = 46/354 (12%)
Query: 70 PDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQF 129
PD ++N N + + ++ + PD +T+ ++K G+ + +
Sbjct: 234 PDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFV 293
Query: 130 HDHVVAQGFRLDQVTYRILINGLCKMGQTRAA---LQLMRQIQGQLVK------------ 174
+ ++ +G ++ T L+ G R A +Q MR+ + L K
Sbjct: 294 LERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLKE 353
Query: 175 -----------------------PDVEMYTIIIHSFCKDKLVSDAYNLYSE--MLARRVL 209
D ++ F KL+ ++ + E +L +
Sbjct: 354 KEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVF--KKLLPNSVDPSGEPPLLPKVFA 411
Query: 210 PDVFTYNALIYGFCIVSQLKEATKLLDEMVT---KNIHPDAYTFNILVDALGKEGNVKEA 266
PD Y L+ G+ ++ + ++L+ M +N HPD T+ +V A G + A
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 267 KTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQ-RGIAPNVHSYSIMIN 325
+ VLA M + GV + ITYN L+ GYC ++++A+D+ M + GI P+V SY+I+I+
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 326 GLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
G AL EM + I P ++Y++L+ SG+ A + D+++
Sbjct: 532 GCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMM 585
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 149/336 (44%), Gaps = 37/336 (11%)
Query: 22 VSIFNRLLRMS--PT--PPIIEF-----NKILTSLVK--MKHYPTA-----ISLSHQLDF 65
V +F +LL S P+ PP++ ++I T+L+K MK+ A + + D
Sbjct: 386 VDVFKKLLPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDD 445
Query: 66 TGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQT 125
PD T T +++ + N + A VLA++ + G + IT+ L+KG C Q+
Sbjct: 446 RNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDR 505
Query: 126 ALQ-FHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIII 184
A + G D V+Y I+I+G + + AL +++ + + P YT ++
Sbjct: 506 AEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLM 565
Query: 185 HSFCKDKLVSDAYNLYSEMLAR-RVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNI 243
+F A ++ EM+ RV D+ +N L+ G+C + +++A +++ M
Sbjct: 566 KAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGF 625
Query: 244 HPDAYTFNILVDALG---KEGNV----KEAKTVLAVMMKQG------------VKPDIIT 284
+P+ T+ L + + K G+ KE K AV K+ +KPD
Sbjct: 626 YPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGL 685
Query: 285 YNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSY 320
++L D + KA +I M + GI PN Y
Sbjct: 686 LDTLADICVRAAFFKKALEIIACMEENGIPPNKTKY 721
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 114/275 (41%), Gaps = 21/275 (7%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P + + ++++ V A + ++ G+ + T +L+ YC Q QI A +
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509
Query: 95 LAKILK-RGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLC 153
L ++ + G PD +++ ++ G L AL F + + +G +++Y L+
Sbjct: 510 LREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA 569
Query: 154 KMGQTRAALQLMRQIQGQ-LVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDV 212
GQ + A ++ ++ VK D+ + +++ +C+ L+ DA + S M P+V
Sbjct: 570 MSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNV 629
Query: 213 FTYNALIYGF-------------------CIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
TY +L G C V + + + + + PD + L
Sbjct: 630 ATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTL 689
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSL 288
D + K+A ++A M + G+ P+ Y +
Sbjct: 690 ADICVRAAFFKKALEIIACMEENGIPPNKTKYKKI 724
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/300 (19%), Positives = 121/300 (40%), Gaps = 42/300 (14%)
Query: 104 RPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQ 163
RPDT F ++ G + + + D +TY ++I ++G+ +
Sbjct: 233 RPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVF 292
Query: 164 LMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARR-----VLPD------- 211
++ +I + +K + ++ ++ + A + M +R VL +
Sbjct: 293 VLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLK 352
Query: 212 -----------VFTYNALIYGFCIVSQLKEA------TKLLDEMVTKNIHP--------- 245
+ G+ ++ E KLL V + P
Sbjct: 353 EKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAP 412
Query: 246 DAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVK---PDIITYNSLMDGYCLVSEVNKAK 302
D+ + L+ K G V + +L M +Q + PD +TY +++ + +++A+
Sbjct: 413 DSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRAR 472
Query: 303 DIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM-DCKNIIPDTVTYSSLIDG 361
+ M + G+ N +Y++++ G CK ++D A +LL EM + I PD V+Y+ +IDG
Sbjct: 473 QVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDG 532
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 82/189 (43%), Gaps = 13/189 (6%)
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCK--DKLV 193
Q RLD + +L K GQT A+ +++ + P V+ +T + S D
Sbjct: 147 QLHRLDANSLGLLAMAAAKSGQTLYAVSVIKSMIRSGYLPHVKAWTAAVASLSASGDDGP 206
Query: 194 SDAYNLY-----------SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKN 242
++ L+ + L + PD +NA++ + + KL +EM +
Sbjct: 207 EESIKLFIAITRRVKRFGDQSLVGQSRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWD 266
Query: 243 IHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAK 302
PD T+N+++ + G + VL ++ +G+K + T +SL+ Y ++ A+
Sbjct: 267 CEPDVLTYNVMIKLCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAE 326
Query: 303 DIFNSMPQR 311
I +M ++
Sbjct: 327 RIVQAMREK 335
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 141/295 (47%), Gaps = 3/295 (1%)
Query: 75 LTILINCYCNQAQITSAFSVLAKI---LKRGYRPDTITFTTLMKGLCLNGQVQTALQFHD 131
L +L++ C + + A L +I + + P F L+ G + +++ A + +
Sbjct: 215 LEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWE 274
Query: 132 HVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDK 191
+ A + VTY LI G C+M + + A++++ +++ ++ + ++ II +
Sbjct: 275 EMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAG 334
Query: 192 LVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFN 251
+S+A + P + TYN+L+ FC L A+K+L M+T+ + P T+N
Sbjct: 335 RLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYN 394
Query: 252 ILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQR 311
K +E + +++ G PD +TY+ ++ C +++ A + M R
Sbjct: 395 HFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNR 454
Query: 312 GIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
GI P++ + +++I+ LC+ + ++EA + IIP +T+ + +GL G
Sbjct: 455 GIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKG 509
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 162/361 (44%), Gaps = 55/361 (15%)
Query: 68 ISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTI---TFTTLMKGLCLNGQVQ 124
+SP +F ++N C + A+S++ ++ + + TF L++ G VQ
Sbjct: 133 LSPSLFD--SVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQ 190
Query: 125 TALQFHDHV--------VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVK-- 174
A++ + A RL +V L++ LCK G R A + +I G +
Sbjct: 191 QAIRAFEFARSYEPVCKSATELRLLEV----LLDALCKEGHVREASMYLERIGGTMDSNW 246
Query: 175 -PDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATK 233
P V ++ I+++ + + + + A L+ EM A V P V TY LI G+C + +++ A +
Sbjct: 247 VPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAME 306
Query: 234 LLDEMVTKNIHPDAYTFNILVDALGKEGNVKEA--------------------------- 266
+L+EM + + FN ++D LG+ G + EA
Sbjct: 307 VLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFC 366
Query: 267 --------KTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
+L +MM +GV P TYN + ++ + +++ + + G +P+
Sbjct: 367 KAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRL 426
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+Y +++ LC+ K+ A+ + EM + I PD +T + LI LC+ + A+E D+
Sbjct: 427 TYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNA 486
Query: 379 I 379
+
Sbjct: 487 V 487
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 147/316 (46%), Gaps = 8/316 (2%)
Query: 70 PDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQF 129
P + IL+N + ++ A + ++ +P +T+ TL++G C +VQ A++
Sbjct: 248 PSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEV 307
Query: 130 HDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCK 189
+ + ++ + + +I+GL + G+ AL +M + P + Y ++ +FCK
Sbjct: 308 LEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCK 367
Query: 190 DKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYT 249
+ A + M+ R V P TYN F ++ +E L +++ PD T
Sbjct: 368 AGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLT 427
Query: 250 FNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMP 309
+++++ L ++G + A V M +G+ PD++T L+ C + + +A + F++
Sbjct: 428 YHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAV 487
Query: 310 QRGIAPNVHSYSIMINGLCKTKKVDEAL---NLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
+RGI P ++ ++ NGL D A +L++ + +P+ TY +D
Sbjct: 488 RRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSSLPHSKKLPN--TYREAVDAPPDKD 545
Query: 367 R---VSHAWELVDDVI 379
R + H E + DV+
Sbjct: 546 RRKSILHRAEAMSDVL 561
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 114/249 (45%), Gaps = 18/249 (7%)
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQL----MRQIQG-QLVKPDVEMYTIIIHSFCKDK 191
GF L + ++N LCK + A L +R +G LV D + ++I + +
Sbjct: 130 GFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADT--FIVLIRRYARAG 187
Query: 192 LVSDAYNLYSEMLARRVLP------DVFTYNALIYGFCIVSQLKEATKLLDEM---VTKN 242
+V A + AR P ++ L+ C ++EA+ L+ + + N
Sbjct: 188 MVQQAIRAFE--FARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSN 245
Query: 243 IHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAK 302
P FNIL++ + +K+A+ + M VKP ++TY +L++GYC + V A
Sbjct: 246 WVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAM 305
Query: 303 DIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGL 362
++ M + N ++ +I+GL + ++ EAL ++ P VTY+SL+
Sbjct: 306 EVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNF 365
Query: 363 CKSGRVSHA 371
CK+G + A
Sbjct: 366 CKAGDLPGA 374
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 87/183 (47%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
FN I+ L + A+ + + P I T L+ +C + A +L ++
Sbjct: 323 FNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMM 382
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
RG P T T+ K + + + + + ++ G D++TY +++ LC+ G+
Sbjct: 383 TRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLS 442
Query: 160 AALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
A+Q+ ++++ + + PD+ T++IH C+ +++ +A+ + + R ++P T+ +
Sbjct: 443 LAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMID 502
Query: 220 YGF 222
G
Sbjct: 503 NGL 505
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 109/258 (42%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
R A ++ + M+ P ++ + ++ +M+ A+ + ++ + +
Sbjct: 264 RKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVF 323
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
+I+ +++ A ++ + P +T+ +L+K C G + A + ++
Sbjct: 324 NPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMT 383
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
+G TY K +T + L ++ PD Y +I+ C+D +S
Sbjct: 384 RGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSL 443
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
A + EM R + PD+ T LI+ C + L+EA + D V + I P TF ++ +
Sbjct: 444 AMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDN 503
Query: 256 ALGKEGNVKEAKTVLAVM 273
L +G AK + ++M
Sbjct: 504 GLRSKGMSDMAKRLSSLM 521
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 165/367 (44%), Gaps = 15/367 (4%)
Query: 21 AVSIFNRLLRMSPTPPIIE-FNKILTSLVKMKHYPTAISL-SHQLDFTGISPDIFTLTIL 78
A+ FN + R S E FN+++ L K + + +L + + T P+ T I+
Sbjct: 64 ALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIV 123
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA--LQFHDHVVAQ 136
Y + A K+ R +T +F L+ LC + V A L F +V+
Sbjct: 124 FKRYVTAHLVQEAIDAYDKLDDFNLRDET-SFYNLVDALCEHKHVVEAEELCFGKNVIGN 182
Query: 137 GFRLDQVT-YRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
GF + + +++ G K+G + +++ + V D+ Y+I + CK
Sbjct: 183 GFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWK 242
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
A LY EM +RR+ DV YN +I ++ ++ EM + P+ T N ++
Sbjct: 243 AVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIK 302
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDI---FNSMPQRG 312
L ++G +++A +L M K+G +PD ITY CL S + K +I F M + G
Sbjct: 303 LLCEDGRMRDAYRMLDEMPKRGCQPDSITY------MCLFSRLEKPSEILSLFGRMIRSG 356
Query: 313 IAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAW 372
+ P + +Y +++ + + L + M PD+ Y+++ID L + G + A
Sbjct: 357 VRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAR 416
Query: 373 ELVDDVI 379
E +++I
Sbjct: 417 EYEEEMI 423
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 106/222 (47%), Gaps = 9/222 (4%)
Query: 97 KILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMG 156
K+ G D +++ M +C +G+ A++ + + ++ +LD V Y +I +
Sbjct: 214 KMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQ 273
Query: 157 QTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYN 216
+++ R+++ + +P+V + II C+D + DAY + EM R PD TY
Sbjct: 274 GVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITY- 332
Query: 217 ALIYGFCIVSQLKEATKLLD---EMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVM 273
C+ S+L++ +++L M+ + P T+ +L+ + G ++ V M
Sbjct: 333 -----MCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTM 387
Query: 274 MKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
+ G PD YN+++D ++ A++ M +RG++P
Sbjct: 388 KESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 179/406 (44%), Gaps = 45/406 (11%)
Query: 4 FLRLKNSLPPSIRNADDAVS-IFNRLLR---MSPTPPIIEFNK-------------ILTS 46
F R SL P +++ A S IF + R + P ++ K +L S
Sbjct: 77 FFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDS 136
Query: 47 LVKMKHYPTAISLSHQLDFTG--ISPDIFTLTILINCYCNQAQITSAFSVLAKILKRG-- 102
L++ + +A+ + ++ G ++P ++ ++LI + ++ A S+L K+L+
Sbjct: 137 LIRSGKFESALGVLDYMEELGDCLNPSVYD-SVLI-ALVKKHELRLALSILFKLLEASDN 194
Query: 103 -------------YRPDTITFTTLMKGLCLNGQVQTALQ--FHDHVVAQGFRLDQVTYRI 147
Y P T+ L+ GL +++ + F + F+ D +Y I
Sbjct: 195 HSDDDTGRVIIVSYLPGTVAVNELLVGL-RRADMRSEFKRVFEKLKGMKRFKFDTWSYNI 253
Query: 148 LINGLCKMGQTRAALQLMRQIQ------GQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYS 201
I+G G AAL L ++++ G PD+ Y +IH C DA ++
Sbjct: 254 CIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWD 313
Query: 202 EMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEG 261
E+ PD TY LI G C ++ +A ++ EM PD +N L+D K
Sbjct: 314 ELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKAR 373
Query: 262 NVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYS 321
V EA + M+++GV+ TYN L+DG +F + ++G + ++S
Sbjct: 374 KVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFS 433
Query: 322 IMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGR 367
I+ LC+ K++ A+ L+ EM+ + D VT SSL+ G K GR
Sbjct: 434 IVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGR 479
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 157/347 (45%), Gaps = 22/347 (6%)
Query: 40 FNKILTSLVKMKHYPTAISL---------SHQLDFTG--ISPDIFTLTILIN---CYCNQ 85
++ +L +LVK A+S+ +H D TG I T+ +N +
Sbjct: 165 YDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRR 224
Query: 86 AQITSAFSVLAKILK--RGYRPDTITFTTLMKGLCLNGQVQTALQF------HDHVVAQG 137
A + S F + + LK + ++ DT ++ + G G + AL V
Sbjct: 225 ADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSS 284
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
F D TY LI+ LC G+ + AL + +++ +PD Y I+I CK + DA
Sbjct: 285 FGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAM 344
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
+Y EM +PD YN L+ G ++ EA +L ++MV + + +T+NIL+D L
Sbjct: 345 RIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGL 404
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
+ G + T+ + K+G D IT++ + C ++ A + M RG + ++
Sbjct: 405 FRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDL 464
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCK 364
+ S ++ G K + D L+ + N++P+ + +++ ++ K
Sbjct: 465 VTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLK 511
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 141/305 (46%), Gaps = 26/305 (8%)
Query: 99 LKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQT 158
L+ GY+ ++ + + +C G + + G LDQ +IL++ L + G+
Sbjct: 84 LRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKF 143
Query: 159 RAALQLMRQIQ--GQLVKPDVEMYTIIIHSFCKD-----------KLVSDAYNLYSEMLA 205
+AL ++ ++ G + P V Y ++ + K KL+ + N +
Sbjct: 144 ESALGVLDYMEELGDCLNPSV--YDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTG 201
Query: 206 RRV----LPDVFTYNALIYGFCIVSQLKEATKLLDEMVT-KNIHPDAYTFNILVDALGKE 260
R + LP N L+ G E ++ +++ K D +++NI + G
Sbjct: 202 RVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCW 261
Query: 261 GNVKEAKTVLAVMMKQ------GVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
G++ A ++ M ++ PDI TYNSL+ CL + A +++ + G
Sbjct: 262 GDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHE 321
Query: 315 PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
P+ +Y I+I G CK+ ++D+A+ + EM +PDT+ Y+ L+DG K+ +V+ A +L
Sbjct: 322 PDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQL 381
Query: 375 VDDVI 379
+ ++
Sbjct: 382 FEKMV 386
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 127/293 (43%), Gaps = 11/293 (3%)
Query: 19 DDAVSIFNRLLRMSPT------PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDI 72
D A+S+F + S P I +N ++ L A+ + +L +G PD
Sbjct: 265 DAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDN 324
Query: 73 FTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDH 132
T ILI C ++ A + ++ G+ PDTI + L+ G +V A Q +
Sbjct: 325 STYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEK 384
Query: 133 VVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQI--QGQLVKPDVEMYTIIIHSFCKD 190
+V +G R TY ILI+GL + G+ A L + +GQ V D ++I+ C++
Sbjct: 385 MVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFV--DAITFSIVGLQLCRE 442
Query: 191 KLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTF 250
+ A L EM R D+ T ++L+ GF + KL+ + N+ P+ +
Sbjct: 443 GKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRW 502
Query: 251 NILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKD 303
N V+A K K+ K + +G DI++ D EV+ +D
Sbjct: 503 NAGVEASLKRPQSKD-KDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMED 554
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 79/152 (51%), Gaps = 1/152 (0%)
Query: 213 FTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAV 272
+TYN+++ F + A +LD+M D T+N+++ LGK G A VL
Sbjct: 631 YTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDR 690
Query: 273 MMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKK 332
+ KQG DI+ YN+L++ + +++A +F+ M GI P+V SY+ MI K K
Sbjct: 691 LTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGK 750
Query: 333 VDEALNLLAEMDCKNIIPDTVTYSSLIDGLCK 364
+ EA L M +P+ VT +++D L K
Sbjct: 751 LKEAYKYLKAMLDAGCLPNHVT-DTILDYLGK 781
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/388 (19%), Positives = 155/388 (39%), Gaps = 34/388 (8%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
R +A +F ++++ +N ++ L + +L L G D T
Sbjct: 373 RKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITF 432
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
+I+ C + ++ A ++ ++ RG+ D +T ++L+ G G+ + H+
Sbjct: 433 SIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIRE 492
Query: 136 QGFRLDQVTYRILINGLCKMGQTR------------AALQLMRQIQGQLVKPDVEMYTII 183
+ + + + K Q++ + L +M + + E
Sbjct: 493 GNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEE---- 548
Query: 184 IHSFCKDKLVSDAY------------NLYSEMLARRV--LPDVFT---YNALIYGFCIVS 226
+ D S Y L+ +RV PD F N + +
Sbjct: 549 VSPMEDDPWSSSPYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKG 608
Query: 227 QLKEATKLLDEMVTKNIHP-DAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITY 285
L A KL + + +YT+N ++ + K+G + A+ VL M + DI TY
Sbjct: 609 DLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATY 668
Query: 286 NSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDC 345
N ++ G + + A + + + ++G ++ Y+ +IN L K ++DEA L M
Sbjct: 669 NVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKS 728
Query: 346 KNIIPDTVTYSSLIDGLCKSGRVSHAWE 373
I PD V+Y+++I+ K+G++ A++
Sbjct: 729 NGINPDVVSYNTMIEVNSKAGKLKEAYK 756
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 1/154 (0%)
Query: 107 TITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMR 166
+ T+ ++M G QTA D + D TY ++I GL KMG+ A ++
Sbjct: 630 SYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLD 689
Query: 167 QIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVS 226
++ Q D+ MY +I++ K + +A L+ M + + PDV +YN +I
Sbjct: 690 RLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAG 749
Query: 227 QLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
+LKEA K L M+ P+ T IL D LGKE
Sbjct: 750 KLKEAYKYLKAMLDAGCLPNHVTDTIL-DYLGKE 782
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 3/163 (1%)
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
L TY +++ K G + A ++ Q+ D+ Y +II K A +
Sbjct: 628 LTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAV 687
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+ + D+ YN LI ++L EAT+L D M + I+PD ++N +++ K
Sbjct: 688 LDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSK 747
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAK 302
G +KEA L M+ G P+ +T ++++D L E+ KA+
Sbjct: 748 AGKLKEAYKYLKAMLDAGCLPNHVT-DTILD--YLGKEMEKAR 787
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%)
Query: 180 YTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMV 239
Y ++ SF K A + +M D+ TYN +I G + + A+ +LD +
Sbjct: 633 YNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLT 692
Query: 240 TKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVN 299
+ + D +N L++ALGK + EA + M G+ PD+++YN++++ ++
Sbjct: 693 KQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLK 752
Query: 300 KAKDIFNSMPQRGIAPN 316
+A +M G PN
Sbjct: 753 EAYKYLKAMLDAGCLPN 769
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 63/129 (48%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
+N +++S VK ++ TA + Q+ + DI T ++I + A +VL ++
Sbjct: 633 YNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLT 692
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
K+G D + + TL+ L ++ A Q DH+ + G D V+Y +I K G+ +
Sbjct: 693 KQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLK 752
Query: 160 AALQLMRQI 168
A + ++ +
Sbjct: 753 EAYKYLKAM 761
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 158/362 (43%), Gaps = 14/362 (3%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A FN+++ P +N +L TA+ + GISPD T +IN
Sbjct: 239 AKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMIN 298
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
+C ++ A + ++ P +++TT++KG +V L+ + + + G
Sbjct: 299 GFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEP 358
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKP-DVEMYTIIIHSFCKDKLVSDAYNL 199
+ TY L+ GLC G+ A +++ + + + P D ++ ++ S K ++ A +
Sbjct: 359 NATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEV 418
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNI----------HPDAYT 249
M V + Y LI C S A KLLD ++ K I P AY
Sbjct: 419 LKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAY- 477
Query: 250 FNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMP 309
N +++ L G +A+ + +MK+GV+ D N+L+ G+ + + +I M
Sbjct: 478 -NPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEILKIMS 535
Query: 310 QRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVS 369
+RG+ ++Y ++I + +A L M +PD+ + S+I+ L + GRV
Sbjct: 536 RRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQ 595
Query: 370 HA 371
A
Sbjct: 596 TA 597
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 146/314 (46%), Gaps = 9/314 (2%)
Query: 67 GISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA 126
G+ D +LI Y + + + K+ G ++ +L K + G+ A
Sbjct: 180 GVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMA 239
Query: 127 LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS 186
++ + +V++G + TY +++ G + AL+ ++ + + PD + +I+
Sbjct: 240 KRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMING 299
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
FC+ K + +A L+ EM ++ P V +Y +I G+ V ++ + ++ +EM + I P+
Sbjct: 300 FCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPN 359
Query: 247 AYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKP-DIITYNSLMDGYCLVSEVNKAKDIF 305
A T++ L+ L G + EAK +L MM + + P D + L+ ++ A ++
Sbjct: 360 ATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVL 419
Query: 306 NSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNII---PDTV-----TYSS 357
+M + Y ++I CK + A+ LL + K II DT+ Y+
Sbjct: 420 KAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNP 479
Query: 358 LIDGLCKSGRVSHA 371
+I+ LC +G+ + A
Sbjct: 480 IIEYLCNNGQTAKA 493
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 136/259 (52%), Gaps = 1/259 (0%)
Query: 122 QVQTALQFHDHVVAQGF-RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMY 180
+++ ALQF G R D+ T+ +I L ++ + A ++ + + V D +M+
Sbjct: 129 KLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMF 188
Query: 181 TIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVT 240
++I S+ K +V ++ ++ +M V + +YN+L + A + ++MV+
Sbjct: 189 VVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVS 248
Query: 241 KNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNK 300
+ + P +T+N+++ ++ A M +G+ PD T+N++++G+C ++++
Sbjct: 249 EGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDE 308
Query: 301 AKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLID 360
A+ +F M I P+V SY+ MI G +VD+ L + EM I P+ TYS+L+
Sbjct: 309 AEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLP 368
Query: 361 GLCKSGRVSHAWELVDDVI 379
GLC +G++ A ++ +++
Sbjct: 369 GLCDAGKMVEAKNILKNMM 387
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 124/241 (51%), Gaps = 1/241 (0%)
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
+G D+ + +LI K G + ++++ ++++ V+ ++ Y + +
Sbjct: 179 KGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMM 238
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
A +++M++ V P TYN +++GF + +L+ A + ++M T+ I PD TFN +++
Sbjct: 239 AKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMIN 298
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
+ + EA+ + M + P +++Y +++ GY V V+ IF M GI P
Sbjct: 299 GFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEP 358
Query: 316 NVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIP-DTVTYSSLIDGLCKSGRVSHAWEL 374
N +YS ++ GLC K+ EA N+L M K+I P D + L+ K+G ++ A E+
Sbjct: 359 NATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEV 418
Query: 375 V 375
+
Sbjct: 419 L 419
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 164/365 (44%)
Query: 15 IRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFT 74
IR + +F RL T +I N ++ K K + I P+ T
Sbjct: 177 IRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEIT 236
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
+ I+I C + ++ +L +I + P I T+L+ + +++ ++ ++
Sbjct: 237 IRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLL 296
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
+ +D + Y I++ K G +A ++ ++ + + +YT+ + C+ V
Sbjct: 297 MKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVK 356
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
+A L SEM V P T+N LI GF ++ + + MVT+ + P FN +V
Sbjct: 357 EAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMV 416
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
++ K NV A +L + +G PD TY+ L+ G+ +++++A +F M R ++
Sbjct: 417 KSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMS 476
Query: 315 PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
P + +I GLC KV+ L M + I P+ Y +LI K G ++A +
Sbjct: 477 PGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRV 536
Query: 375 VDDVI 379
+++I
Sbjct: 537 YNEMI 541
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 90/195 (46%), Gaps = 8/195 (4%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
+ +A + + + +P FN ++ + + + G+ P
Sbjct: 354 DVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFN 413
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQ-FHD---H 132
++ + A +L K + +G+ PD T++ L++G + AL+ F++
Sbjct: 414 EMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYR 473
Query: 133 VVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKL 192
++ GF + +R LI GLC G+ A + ++ ++ +L++P+ ++Y +I +F K
Sbjct: 474 KMSPGFEV----FRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGD 529
Query: 193 VSDAYNLYSEMLARR 207
++A +Y+EM++ R
Sbjct: 530 KTNADRVYNEMISVR 544
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 120/266 (45%), Gaps = 3/266 (1%)
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
IL+ +C + ++ A S+ K+ R + PD T L+ G G V F+ +V
Sbjct: 179 FNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYHEMV 237
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
+GF+ + VTY I I+G CK AL+L + V++ T +IH +
Sbjct: 238 KRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKI 297
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
A L+ E+ R + PD YNAL+ + A K++ EM K I PD+ TF+ +
Sbjct: 298 KARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMF 357
Query: 255 DAL--GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG 312
+ KE M ++ + P T LM +C EVN D++ M ++G
Sbjct: 358 IGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKG 417
Query: 313 IAPNVHSYSIMINGLCKTKKVDEALN 338
P+ H+ ++ LC ++ ++A
Sbjct: 418 YCPHGHALELLTTALCARRRANDAFE 443
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 113/221 (51%), Gaps = 3/221 (1%)
Query: 147 ILINGLCKMGQTRAALQLMRQIQGQLVKPD--VEMYTIIIHSFCKDKLVSDAYNLYSEML 204
IL+ + K G L+ +++ ++ + V+ + I++ +FC ++ + +A +++ E L
Sbjct: 144 ILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIF-EKL 202
Query: 205 ARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVK 264
R PDV T N L+ GF + EMV + P++ T+ I +D K+ N
Sbjct: 203 HSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFG 262
Query: 265 EAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMI 324
EA + M + + +L+ G + KA+ +F+ + +RG+ P+ +Y+ ++
Sbjct: 263 EALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALM 322
Query: 325 NGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKS 365
+ L K V A+ ++ EM+ K I PD+VT+ S+ G+ KS
Sbjct: 323 SSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKS 363
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 134/293 (45%), Gaps = 14/293 (4%)
Query: 91 AFSVLAKILKRGYRPDTITFTTLMKGLC-------LNGQVQTALQFHDHVVAQGFRLDQV 143
A++++A++ ++ Y P+ ++F ++ LC ++ ++ + + F +D+
Sbjct: 122 AWALMAEV-RKDY-PNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDE- 178
Query: 144 TYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEM 203
+ IL+ C + + A + ++ + PDV+ I++ F + V+ Y EM
Sbjct: 179 -FNILLRAFCTEREMKEARSIFEKLHSRF-NPDVKTMNILLLGFKEAGDVTATELFYHEM 236
Query: 204 LARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNV 263
+ R P+ TY I GFC EA +L ++M + L+ G N
Sbjct: 237 VKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNK 296
Query: 264 KEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIM 323
+A+ + + K+G+ PD YN+LM +V+ A + M ++GI P+ ++ M
Sbjct: 297 IKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSM 356
Query: 324 INGLCKTKK--VDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
G+ K+K+ + +M ++++P T T L+ C +G V+ +L
Sbjct: 357 FIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDL 409
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 2/150 (1%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
RN A +F+ + + TP +N +++SL+K AI + +++ GI PD T
Sbjct: 294 RNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTF 353
Query: 76 -TILINCY-CNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHV 133
++ I + K+ +R P T T LMK C NG+V L ++
Sbjct: 354 HSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYM 413
Query: 134 VAQGFRLDQVTYRILINGLCKMGQTRAALQ 163
+ +G+ +L LC + A +
Sbjct: 414 LEKGYCPHGHALELLTTALCARRRANDAFE 443
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 148/326 (45%), Gaps = 28/326 (8%)
Query: 58 SLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGL 117
SL + G +P +F L LI + +I A V+ K+ RG T L+ +
Sbjct: 150 SLIKSYNRCGSAPFVFDL--LIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEV 207
Query: 118 CLNGQVQTALQFHDHVVAQGFRLDQV-----------------TYRILINGLCKMGQTRA 160
+ + V F LD V T+ ++ + G+T
Sbjct: 208 SRRRGASNGYKMYREV----FGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEM 263
Query: 161 ALQLMRQIQGQL-VKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
++ R+++ ++ P+V Y +++ ++C L+S+A ++ EM R V+ D+ YN +I
Sbjct: 264 VERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMI 323
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVK 279
G C ++ +A +L +M K I T+ LV+ K G+V V M ++G +
Sbjct: 324 GGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFE 383
Query: 280 PDIITYNSLMDGYCLVSE---VNKAKDIFNSMPQRGI-APNVHSYSIMINGLCKTKKVDE 335
D +T +L++G C + V +A DI + + P+ + Y +++ LC+ K+D
Sbjct: 384 ADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDR 443
Query: 336 ALNLLAEMDCKNIIPDTVTYSSLIDG 361
ALN+ AEM K P TY + IDG
Sbjct: 444 ALNIQAEMVGKGFKPSQETYRAFIDG 469
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 123/252 (48%), Gaps = 17/252 (6%)
Query: 145 YRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEML 204
+ +LI + A+ +MR+++ + + + +I + + S+ Y +Y E+
Sbjct: 165 FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVF 224
Query: 205 A-------------RRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTK-NIHPDAYTF 250
++ P+ T+N+++ F + + ++ EM + P+ Y++
Sbjct: 225 GLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSY 284
Query: 251 NILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQ 310
N+L++A G + EA+ V M +GV DI+ YN+++ G C EV KAK++F M
Sbjct: 285 NVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGL 344
Query: 311 RGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLC--KSG-R 367
+GI +Y ++NG CK VD L + EM K D +T +L++GLC + G R
Sbjct: 345 KGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQR 404
Query: 368 VSHAWELVDDVI 379
V A ++V D +
Sbjct: 405 VVEAADIVKDAV 416
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 113/250 (45%), Gaps = 6/250 (2%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDF-TGISPDIFTLTILINCYCNQAQITSAFS 93
P FN ++ S + + +++ G SP++++ +L+ YC + ++ A
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK 302
Query: 94 VLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLC 153
V ++ RG D + + T++ GLC N +V A + + +G +TY L+NG C
Sbjct: 303 VWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYC 362
Query: 154 KMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDK---LVSDAYNLYSEMLARRVL- 209
K G + L + R+++ + + D ++ C D+ V +A ++ + + +
Sbjct: 363 KAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFY 422
Query: 210 PDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTV 269
P Y L+ C ++ A + EMV K P T+ +D G G+ +E +
Sbjct: 423 PSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGD-EETSAL 481
Query: 270 LAVMMKQGVK 279
LA+ M + +K
Sbjct: 482 LAIEMAESLK 491
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 4/200 (2%)
Query: 102 GYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAA 161
G P+ ++ LM+ C G + A + + + +G D V Y +I GLC + A
Sbjct: 276 GCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKA 335
Query: 162 LQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYG 221
+L R + + ++ Y +++ +CK V +Y EM + D T AL+ G
Sbjct: 336 KELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEG 395
Query: 222 FCI---VSQLKEATKLLDEMVTKNI-HPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQG 277
C ++ EA ++ + V + + +P + +LV L ++G + A + A M+ +G
Sbjct: 396 LCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKG 455
Query: 278 VKPDIITYNSLMDGYCLVSE 297
KP TY + +DGY +V +
Sbjct: 456 FKPSQETYRAFIDGYGIVGD 475
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 4/210 (1%)
Query: 34 TPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFS 93
+P + +N ++ + A + ++ G+ DI +I C+ ++ A
Sbjct: 278 SPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKE 337
Query: 94 VLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLC 153
+ + +G +T+ L+ G C G V + L + + +GF D +T L+ GLC
Sbjct: 338 LFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLC 397
Query: 154 --KMGQ--TRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVL 209
+ GQ AA + ++ + P Y +++ C+D + A N+ +EM+ +
Sbjct: 398 DDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFK 457
Query: 210 PDVFTYNALIYGFCIVSQLKEATKLLDEMV 239
P TY A I G+ IV + + L EM
Sbjct: 458 PSQETYRAFIDGYGIVGDEETSALLAIEMA 487
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 173/395 (43%), Gaps = 40/395 (10%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
++ N+L P + +N+I+ ++ ++ A+ L ++ F+G T+ L+
Sbjct: 38 SLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQ 97
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQ---------------- 124
N+ + +L+ G + +L+ NG+++
Sbjct: 98 VCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSS 157
Query: 125 --------TALQFHDHVVAQ-------GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQ 169
T L + D + G + D VT+ L++G G ++ A+ +++++Q
Sbjct: 158 WNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ 217
Query: 170 GQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLK 229
+KP + ++ + + + ++ +L ++ DV+ LI + L
Sbjct: 218 IAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLP 277
Query: 230 EATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLM 289
A + D M KNI +N LV L +K+A+ ++ M K+G+KPD IT+NSL
Sbjct: 278 YARMVFDMMDAKNI----VAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLA 333
Query: 290 DGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNII 349
GY + + KA D+ M ++G+APNV S++ + +G K AL + +M + +
Sbjct: 334 SGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVG 393
Query: 350 PDTVTYSSLID-----GLCKSGRVSHAWELVDDVI 379
P+ T S+L+ L SG+ H + L ++I
Sbjct: 394 PNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLI 428
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 161/373 (43%), Gaps = 45/373 (12%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
+N IL+S K+ + AI L +++ G+ PDI T L++ Y ++ A +VL ++
Sbjct: 158 WNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ 217
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
G +P T + ++L++ + G ++ H +++ D LI+ K G
Sbjct: 218 IAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGY-- 275
Query: 160 AALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
L R + + ++ + ++ L+ DA L M + PD T+N+L
Sbjct: 276 --LPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLA 333
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVK 279
G+ + + ++A ++ +M K + P+ ++ + K GN + A V M ++GV
Sbjct: 334 SGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVG 393
Query: 280 PDIITYNSLMD---------------GYCL--------------------VSEVNKAKDI 304
P+ T ++L+ G+CL ++ A +I
Sbjct: 394 PNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEI 453
Query: 305 FNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCK 364
F + + +A S++ M+ G + +E + + M + PD +T++S++ +CK
Sbjct: 454 FWGIKNKSLA----SWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLS-VCK 508
Query: 365 -SGRVSHAWELVD 376
SG V W+ D
Sbjct: 509 NSGLVQEGWKYFD 521
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/416 (20%), Positives = 176/416 (42%), Gaps = 42/416 (10%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
DDA+ + + + P I+ +N +L+ AI++ ++ G+ P +++ L
Sbjct: 172 DDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSL 231
Query: 79 INCYCNQAQITSAFSVLAKIL-------------------KRGYRP------------DT 107
+ + ++ IL K GY P +
Sbjct: 232 LQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNI 291
Query: 108 ITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQ 167
+ + +L+ GL ++ A + +G + D +T+ L +G +G+ AL ++ +
Sbjct: 292 VAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGK 351
Query: 168 IQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQ 227
++ + V P+V +T I K+ +A ++ +M V P+ T + L+ +S
Sbjct: 352 MKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSL 411
Query: 228 LKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVK-PDIITYN 286
L ++ + KN+ DAY LVD GK G+++ A + G+K + ++N
Sbjct: 412 LHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIF-----WGIKNKSLASWN 466
Query: 287 SLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKK-VDEALNLLAEMDC 345
++ GY + + F+ M + G+ P+ +++ +++ +CK V E M
Sbjct: 467 CMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLS-VCKNSGLVQEGWKYFDLMRS 525
Query: 346 K-NIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVIFI--FNVWMSYAKAIKLTRQL 398
+ IIP S ++D L +SG + AW+ + + +W ++ + K+ R L
Sbjct: 526 RYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDL 581
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 154/345 (44%), Gaps = 32/345 (9%)
Query: 67 GISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA 126
G P+ ++ C ++ AF V+ ++ G ++ L+ G +G+ Q A
Sbjct: 207 GFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKA 266
Query: 127 LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS 186
+ + ++ G + VTY LI G +G A ++ ++Q + + PD+ + ++IH+
Sbjct: 267 VDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHT 326
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQL------------------ 228
+ + +A +++ + R+++PD +T+ +++ C+ +
Sbjct: 327 YTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVT 386
Query: 229 --------------KEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMM 274
A K+L M K+ D YT+ + + AL + G + A + +++
Sbjct: 387 GNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIII 446
Query: 275 KQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVD 334
K+ D +++++D + + N A +F +V SY++ I GL + K+++
Sbjct: 447 KEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIE 506
Query: 335 EALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
EA +L +M I P+ TY ++I GLCK +++ + I
Sbjct: 507 EAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECI 551
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 135/298 (45%), Gaps = 5/298 (1%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
AV +FN+++++ +P ++ + ++ V + A ++ ++ G++PDI ++I+
Sbjct: 266 AVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIH 325
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
Y + A V + KR PD TF +++ LCL+G+ + H + F
Sbjct: 326 TYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRI-THGIGTDF-- 382
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
D VT +L N K+G AL+++ + + D YT+ + + C+ A +Y
Sbjct: 383 DLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMY 442
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
++ + D ++A+I + + A L + + D ++ + + L +
Sbjct: 443 KIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRA 502
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA--PN 316
++EA ++ M + G+ P+ TY +++ G C E K + I Q G+ PN
Sbjct: 503 KRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPN 560
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 151/354 (42%), Gaps = 45/354 (12%)
Query: 51 KHYPTAISLSHQLDFTG--ISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTI 108
+ Y + + +L +G I P +F L L+ + A V + G+ P+T
Sbjct: 87 REYYSIDRIIERLKISGCEIKPRVFLL--LLEIFWRGHIYDKAIEVYTGMSSFGFVPNTR 144
Query: 109 TFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQ----L 164
+M V AL+ + + + F ++ I ++ C G R L +
Sbjct: 145 AMNMMMDVNFKLNVVNGALEIFEGIRFRNF----FSFDIALSHFCSRG-GRGDLVGVKIV 199
Query: 165 MRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCI 224
++++ G+ P+ E + I+ C+ VS+A+ + M+ + V ++ L+ GF
Sbjct: 200 LKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFR 259
Query: 225 VSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIIT 284
+ ++A L ++M+ P+ T+ L+ G V EA TVL+ + +G+ PDI+
Sbjct: 260 SGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVL 319
Query: 285 YNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVD---------- 334
N ++ Y + +A+ +F S+ +R + P+ ++++ +++ LC + K D
Sbjct: 320 CNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIG 379
Query: 335 ----------------------EALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
AL +L+ M K+ D TY+ + LC+ G
Sbjct: 380 TDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGG 433
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 115/253 (45%), Gaps = 4/253 (1%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++A +F L + P F IL+SL + ++H + G D+ T +L
Sbjct: 334 EEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI---GTDFDLVTGNLL 390
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
NC+ + A VL+ + + + D T+T + LC G + A++ + ++ +
Sbjct: 391 SNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKK 450
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
LD + +I+ L ++G+ A+ L ++ + DV YT+ I + K + +AY+
Sbjct: 451 HLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYS 510
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
L +M + P+ TY +I G C + ++ K+L E + + + D T + L
Sbjct: 511 LCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNTKFQVYSLLS 570
Query: 259 K-EGNVKEAKTVL 270
+ G+ E ++V
Sbjct: 571 RYRGDFSEFRSVF 583
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 89/176 (50%), Gaps = 6/176 (3%)
Query: 202 EMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEG 261
M+ P+ + ++ C + EA +++ M+ I +++LV + G
Sbjct: 202 RMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSG 261
Query: 262 NVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYS 321
++A + M++ G P+++TY SL+ G+ + V++A + + + G+AP++ +
Sbjct: 262 EPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCN 321
Query: 322 IMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG------RVSHA 371
+MI+ + + +EA + ++ + ++PD T++S++ LC SG R++H
Sbjct: 322 LMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHG 377
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 120/266 (45%), Gaps = 30/266 (11%)
Query: 131 DHVVA-------QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYT-- 181
DH+V + + +D++ R+ I+G C++ L L +G + +E+YT
Sbjct: 76 DHMVGVVEKLTREYYSIDRIIERLKISG-CEIKPRVFLLLLEIFWRGHIYDKAIEVYTGM 134
Query: 182 -------------IIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVS-- 226
+++ K +V+ A ++ + R + F+++ + FC
Sbjct: 135 SSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFR----NFFSFDIALSHFCSRGGR 190
Query: 227 -QLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITY 285
L +L M+ + +P+ F ++ + G V EA V+ +M+ G+ + +
Sbjct: 191 GDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVW 250
Query: 286 NSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDC 345
+ L+ G+ E KA D+FN M Q G +PN+ +Y+ +I G VDEA +L+++
Sbjct: 251 SMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQS 310
Query: 346 KNIIPDTVTYSSLIDGLCKSGRVSHA 371
+ + PD V + +I + GR A
Sbjct: 311 EGLAPDIVLCNLMIHTYTRLGRFEEA 336
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 105/215 (48%), Gaps = 9/215 (4%)
Query: 167 QIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVS 226
+I G +KP V + +++ F + + A +Y+ M + +P+ N ++ ++
Sbjct: 100 KISGCEIKPRV--FLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLN 157
Query: 227 QLKEATKLLDEMVTKNIHPDAYTFNILVDAL---GKEGNVKEAKTVLAVMMKQGVKPDII 283
+ A ++ + + +N ++F+I + G G++ K VL M+ +G P+
Sbjct: 158 VVNGALEIFEGIRFRNF----FSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRE 213
Query: 284 TYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM 343
+ ++ C V++A + M GI+ +V+ +S++++G ++ + +A++L +M
Sbjct: 214 RFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKM 273
Query: 344 DCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
P+ VTY+SLI G G V A+ ++ V
Sbjct: 274 IQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKV 308
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 142/296 (47%), Gaps = 9/296 (3%)
Query: 84 NQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQV 143
+ +Q F ++ K + P F L+ LC +G ++ A +F + F +D
Sbjct: 204 DTSQAIRTFDIMDKF---KHTPYDEAFQGLLCALCRHGHIEKAEEFM-LASKKLFPVDVE 259
Query: 144 TYRILINGLCKMG-QTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSE 202
+ +++NG C + A ++ R++ + P+ + Y+ +I F K + D+ LY E
Sbjct: 260 GFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDE 319
Query: 203 MLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGN 262
M R + P + YN+L+Y EA KL+ ++ + + PD+ T+N ++ L + G
Sbjct: 320 MKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGK 379
Query: 263 VKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSI 322
+ A+ VLA M+ + + P + T+++ ++ K ++ M + P ++ +
Sbjct: 380 LDVARNVLATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQMKISDLGPTEETFLL 435
Query: 323 MINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
++ L K K+ + AL + AEMD I+ + Y + I GL G + A E+ ++
Sbjct: 436 ILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEM 491
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 142/320 (44%), Gaps = 12/320 (3%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISP-DIFTLTILI 79
A+ F+ + + TP F +L +L + H A L + P D+ +++
Sbjct: 208 AIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEF--MLASKKLFPVDVEGFNVIL 265
Query: 80 NCYCN-QAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
N +CN +T A + ++ P+ +++ ++ G + +L+ +D + +G
Sbjct: 266 NGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGL 325
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
Y L+ L + A++LM+++ + +KPD Y +I C+ + A N
Sbjct: 326 APGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARN 385
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
+ + M++ + P V T++A F ++ ++L +M ++ P TF +++ L
Sbjct: 386 VLATMISENLSPTVDTFHA----FLEAVNFEKTLEVLGQMKISDLGPTEETFLLILGKLF 441
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
K + A + A M + + + Y + + G + KA++I++ M +G N
Sbjct: 442 KGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGFVGNPM 501
Query: 319 SYSIM----INGLCKTKKVD 334
++ + G+ K+K+++
Sbjct: 502 LQKLLEEQKVKGVRKSKRMN 521
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/245 (18%), Positives = 109/245 (44%), Gaps = 9/245 (3%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A I+ + TP ++ +++ K+ + ++ L ++ G++P I L+
Sbjct: 277 EAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLV 336
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ A ++ K+ + G +PD++T+ ++++ LC G++ A ++++
Sbjct: 337 YVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLS 396
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
T+ + + L+++ Q++ + P E + +I+ K K +A +
Sbjct: 397 PTVDTFHAFLEAV----NFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKI 452
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
++EM ++ + Y A I G L++A ++ EM +K + N ++ L +
Sbjct: 453 WAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSK-----GFVGNPMLQKLLE 507
Query: 260 EGNVK 264
E VK
Sbjct: 508 EQKVK 512
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 138/285 (48%), Gaps = 5/285 (1%)
Query: 97 KILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMG 156
K +R D I + +++ C NG+ + A++ + +G VT+ ILI G ++G
Sbjct: 237 KFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLG 296
Query: 157 QTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYN 216
+ AA+ LM++++ + DV +T +I + + A +++ +M V+P+ T
Sbjct: 297 KCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIM 356
Query: 217 ALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQ 276
+ + + + + +++ V D N LVD K G +++A+ V + +
Sbjct: 357 SAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK 416
Query: 277 GVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEA 336
D+ T+NS++ GYC KA ++F M + PN+ +++ MI+G K EA
Sbjct: 417 ----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEA 472
Query: 337 LNLLAEMDCKNIIP-DTVTYSSLIDGLCKSGRVSHAWELVDDVIF 380
++L M+ + +T T++ +I G ++G+ A EL + F
Sbjct: 473 MDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQF 517
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 146/335 (43%), Gaps = 35/335 (10%)
Query: 71 DIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFH 130
++FT + +I Y + + + ++K G PD F +++G G V+ H
Sbjct: 145 NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIH 204
Query: 131 DHVVAQG---------------------------FRL----DQVTYRILINGLCKMGQTR 159
V+ G FR D + + ++ C+ G+
Sbjct: 205 SVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHE 264
Query: 160 AALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
A++L+++++ + + P + + I+I + + A +L +M + DVFT+ A+I
Sbjct: 265 EAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMI 324
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVK 279
G +A + +M + P+A T V A + + V ++ +K G
Sbjct: 325 SGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFI 384
Query: 280 PDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNL 339
D++ NSL+D Y ++ A+ +F+S+ + +V++++ MI G C+ +A L
Sbjct: 385 DDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYEL 440
Query: 340 LAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
M N+ P+ +T++++I G K+G A +L
Sbjct: 441 FTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDL 475
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 132/281 (46%), Gaps = 36/281 (12%)
Query: 117 LCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPD 176
LC NG + A + D + QG ++ + TY L+ G +++ G +PD
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLG-RILHARFGLFTEPD 114
Query: 177 VEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLD 236
V + T ++ + K ++DA ++ M R ++FT++A+I + ++ +E KL
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSMRER----NLFTWSAMIGAYSRENRWREVAKLFR 170
Query: 237 EMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGV------------------ 278
M+ + PD + F ++ G+V+ K + +V++K G+
Sbjct: 171 LMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCG 230
Query: 279 -------------KPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMIN 325
+ D+I +NS++ YC + +A ++ M + GI+P + +++I+I
Sbjct: 231 ELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIG 290
Query: 326 GLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
G + K D A++L+ +M+ I D T++++I GL +G
Sbjct: 291 GYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNG 331
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/428 (19%), Positives = 168/428 (39%), Gaps = 72/428 (16%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++AV + + + +P ++ +N ++ ++ A+ L +++ GI+ D+FT T +
Sbjct: 264 EEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAM 323
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ + A + K+ G P+ +T + + + + H V GF
Sbjct: 324 ISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGF 383
Query: 139 -------------------------------RLDQVTYRILINGLCKMGQTRAALQLMRQ 167
D T+ +I G C+ G A +L +
Sbjct: 384 IDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTR 443
Query: 168 IQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLAR-RVLPDVFTYNALIYGFCIVS 226
+Q ++P++ + +I + K+ +A +L+ M +V + T+N +I G+
Sbjct: 444 MQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNG 503
Query: 227 QLKEATKLLDEMVTKNIHPDAYTF-----------------------------------N 251
+ EA +L +M P++ T N
Sbjct: 504 KKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKN 563
Query: 252 ILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQR 311
L D K G+++ ++T+ M + DIIT+NSL+ GY L A +FN M +
Sbjct: 564 ALTDTYAKSGDIEYSRTIFLGMETK----DIITWNSLIGGYVLHGSYGPALALFNQMKTQ 619
Query: 312 GIAPNVHSYSIMINGLCKTKKVDEALNLLAEM-DCKNIIPDTVTYSSLIDGLCKSGRVSH 370
GI PN + S +I VDE + + + +IIP S+++ ++ R+
Sbjct: 620 GITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEE 679
Query: 371 AWELVDDV 378
A + + ++
Sbjct: 680 ALQFIQEM 687
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 128/257 (49%), Gaps = 2/257 (0%)
Query: 124 QTALQFHDHVVAQ-GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTI 182
+ + F D V + G D +Y +++ L + + +++ + + V PD+E TI
Sbjct: 132 EAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTI 191
Query: 183 IIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKN 242
+ SF + V A L+ E + V ++NAL+ C S + A + + N
Sbjct: 192 AMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAK-KGN 250
Query: 243 IHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAK 302
I D+ ++NI++ K G V+E + VL M++ G PD ++Y+ L++G +N +
Sbjct: 251 IPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSV 310
Query: 303 DIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGL 362
+IF+++ +G P+ + Y+ MI + DE++ M + P+ TYS L+ GL
Sbjct: 311 EIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGL 370
Query: 363 CKSGRVSHAWELVDDVI 379
K +VS A E+ ++++
Sbjct: 371 IKGRKVSDALEIFEEML 387
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 149/332 (44%), Gaps = 3/332 (0%)
Query: 44 LTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGY 103
+ S V++ + AI L + + G+ + L+ C C ++ +++A SV K+G
Sbjct: 193 MDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA--KKGN 250
Query: 104 RP-DTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAAL 162
P D+ ++ ++ G G+V+ + +V GF D ++Y LI GL + G+ ++
Sbjct: 251 IPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSV 310
Query: 163 QLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGF 222
++ I+ + PD +Y +I +F + ++ Y ML P++ TY+ L+ G
Sbjct: 311 EIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGL 370
Query: 223 CIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDI 282
++ +A ++ +EM+++ + P + L G A + K G +
Sbjct: 371 IKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISE 430
Query: 283 ITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAE 342
Y L+ + ++++ M + G +V Y +++GLC ++ A+ ++ E
Sbjct: 431 SAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEE 490
Query: 343 MDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
K P+ YS L L S + A++L
Sbjct: 491 AMRKGFCPNRFVYSRLSSKLMASNKTELAYKL 522
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 153/356 (42%), Gaps = 2/356 (0%)
Query: 17 NADDAVSIFNRLLRM-SPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
+ + V+ F+ +R T + ++ IL +L + K + + + + G++PD+ L
Sbjct: 130 SGEAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECL 189
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
TI ++ + + A + + G + T +F L++ LC V A +
Sbjct: 190 TIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN-AKK 248
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
D +Y I+I+G K+G+ ++++++ PD Y+ +I + ++D
Sbjct: 249 GNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRIND 308
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
+ ++ + + +PD YNA+I F E+ + M+ + P+ T++ LV
Sbjct: 309 SVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVS 368
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
L K V +A + M+ +GV P S + C + A I+ + G
Sbjct: 369 GLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRI 428
Query: 316 NVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
+ +Y +++ L + K LN+ EM D Y ++DGLC G + +A
Sbjct: 429 SESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENA 484
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 132/301 (43%), Gaps = 1/301 (0%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
FN +L L + H A S+ + I D + I+I+ + ++ VL +++
Sbjct: 224 FNALLRCLCERSHVSAAKSVFNAKK-GNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMV 282
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
+ G+ PD ++++ L++GL G++ +++ D++ +G D Y +I
Sbjct: 283 ESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFD 342
Query: 160 AALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
+++ R++ + +P++E Y+ ++ K + VSDA ++ EML+R VLP + +
Sbjct: 343 ESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFL 402
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVK 279
C A + + + +L+ L + G V M + G
Sbjct: 403 KPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYP 462
Query: 280 PDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNL 339
D+ Y ++DG C++ + A + ++G PN YS + + L + K + A L
Sbjct: 463 SDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKL 522
Query: 340 L 340
Sbjct: 523 F 523
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 102/232 (43%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+D+V IF+ + P +N ++ + + + + ++ ++ P++ T + L
Sbjct: 307 NDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKL 366
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
++ +++ A + ++L RG P T T+ +K LC G A+ + G
Sbjct: 367 VSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGC 426
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
R+ + Y++L+ L + G+ L + ++Q DVE+Y I+ C + +A
Sbjct: 427 RISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVL 486
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTF 250
+ E + + P+ F Y+ L ++ + A KL ++ +A +F
Sbjct: 487 VMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKARATENARSF 538
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 87/202 (43%)
Query: 14 SIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIF 73
S R+ D+++ + R+L P + ++K+++ L+K + A+ + ++ G+ P
Sbjct: 337 SARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTG 396
Query: 74 TLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHV 133
+T + C+ +A + K K G R + L+K L G+ L D +
Sbjct: 397 LVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEM 456
Query: 134 VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLV 193
G+ D Y +++GLC +G A+ +M + + P+ +Y+ +
Sbjct: 457 QESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKT 516
Query: 194 SDAYNLYSEMLARRVLPDVFTY 215
AY L+ ++ R + ++
Sbjct: 517 ELAYKLFLKIKKARATENARSF 538
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 152/355 (42%), Gaps = 4/355 (1%)
Query: 16 RNADDAVSIFNRLLRMSP--TPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIF 73
R+++D++ FN R +P TP +E+ ++ SL K Y + + Q+ +
Sbjct: 89 RSSNDSLRFFN-WARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGE 147
Query: 74 TLTILINCYCNQAQITSAFSVLAKILKR-GYRPDTITFTTLMKGLCLNGQVQTALQFHDH 132
TL +I Y + A + + K G + + +L+ LC A
Sbjct: 148 TLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRR 207
Query: 133 VVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKL 192
++ +G + D+ TY IL+NG C G+ + A + + ++ + P ++I
Sbjct: 208 MIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGY 267
Query: 193 VSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNI 252
+ A + S+M +PD+ T+N LI +++ ++ + D T+
Sbjct: 268 LESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKT 327
Query: 253 LVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG 312
L+ A+ K G + EA +L ++ G KP Y ++ G C + A F+ M +
Sbjct: 328 LIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKA 387
Query: 313 IAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGR 367
PN Y+++I + K +A N L EM ++P + + + DGL G+
Sbjct: 388 HPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGK 442
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 117/241 (48%), Gaps = 7/241 (2%)
Query: 143 VTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYS- 201
+ Y L L + + ++++Q++ + E II + K+ V A L++
Sbjct: 112 MEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNG 171
Query: 202 --EMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+ L + DV YN+L++ C V A L+ M+ K + PD T+ ILV+
Sbjct: 172 VPKTLGCQQTVDV--YNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCS 229
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
G +KEA+ L M ++G P + L++G + AK++ + M + G P++ +
Sbjct: 230 AGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQT 289
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCK-NIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
++I+I + K+ +V+ + + CK + D TY +LI + K G++ A+ L+++
Sbjct: 290 FNILIEAISKSGEVEFCIEMYYTA-CKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNC 348
Query: 379 I 379
+
Sbjct: 349 V 349
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 94/172 (54%)
Query: 208 VLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAK 267
+ PDV +YN LI G C EA L+DE+ K + PD TFNIL+ +G +E +
Sbjct: 173 IEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGE 232
Query: 268 TVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGL 327
+ A M+++ VK DI +YN+ + G + ++ + +F+ + + P+V +++ MI G
Sbjct: 233 QIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGF 292
Query: 328 CKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
K+DEA+ E++ P ++SL+ +CK+G + A+EL ++
Sbjct: 293 VSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIF 344
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 115/255 (45%), Gaps = 1/255 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFT-GISPDIFTLTI 77
++A +F+ + + + FN +L + V K + + +L I PD+ +
Sbjct: 123 ENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNT 182
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
LI C + T A +++ +I +G +PD ITF L+ G+ + Q +V +
Sbjct: 183 LIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKN 242
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
+ D +Y + GL ++ + L +++G +KPDV +T +I F + + +A
Sbjct: 243 VKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAI 302
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
Y E+ P F +N+L+ C L+ A +L E+ K + D +VDAL
Sbjct: 303 TWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDAL 362
Query: 258 GKEGNVKEAKTVLAV 272
K EA+ ++ +
Sbjct: 363 VKGSKQDEAEEIVEL 377
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 119/257 (46%), Gaps = 1/257 (0%)
Query: 121 GQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQL-VKPDVEM 179
G + A + D + + + +++ L+N + + +++ G+L ++PDV
Sbjct: 120 GMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVAS 179
Query: 180 YTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMV 239
Y +I C ++A L E+ + + PD T+N L++ + +E ++ MV
Sbjct: 180 YNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMV 239
Query: 240 TKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVN 299
KN+ D ++N + L E +E ++ + +KPD+ T+ +++ G+ +++
Sbjct: 240 EKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLD 299
Query: 300 KAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLI 359
+A + + + G P ++ ++ +CK ++ A L E+ K ++ D ++
Sbjct: 300 EAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVV 359
Query: 360 DGLCKSGRVSHAWELVD 376
D L K + A E+V+
Sbjct: 360 DALVKGSKQDEAEEIVE 376
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 95/201 (47%)
Query: 104 RPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQ 163
PD ++ TL+KGLC G A+ D + +G + D +T+ IL++ G+ Q
Sbjct: 174 EPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQ 233
Query: 164 LMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFC 223
+ ++ + VK D+ Y + + + +L+ ++ + PDVFT+ A+I GF
Sbjct: 234 IWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFV 293
Query: 224 IVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDII 283
+L EA E+ P + FN L+ A+ K G+++ A + + + + D
Sbjct: 294 SEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEA 353
Query: 284 TYNSLMDGYCLVSEVNKAKDI 304
++D S+ ++A++I
Sbjct: 354 VLQEVVDALVKGSKQDEAEEI 374
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 130/275 (47%), Gaps = 18/275 (6%)
Query: 123 VQTALQFHDHVVAQ-GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDV---E 178
+Q AL+F + GF +++T R + L K + +RQ+ + +V
Sbjct: 107 LQKALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTA 166
Query: 179 MYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEM 238
T ++ ++ V +A + M PDV+ YN +I C V K+A LLD+M
Sbjct: 167 SITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQM 226
Query: 239 VTKNIH--PDAYTFNILVDALGKEG-----------NVKEAKTVLAVMMKQGVKPDIITY 285
PD YT+ IL+ + + G + EA + M+ +G PD++TY
Sbjct: 227 QLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTY 286
Query: 286 NSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM-D 344
N L+DG C + + +A ++F M +G PN +Y+ I T +++ A+ ++ M
Sbjct: 287 NCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKK 346
Query: 345 CKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+ +P + TY+ LI L ++ R + A +LV +++
Sbjct: 347 LGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMV 381
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 111/236 (47%), Gaps = 14/236 (5%)
Query: 148 LINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEML--A 205
L+ L + G + AL +++ KPDV Y II++ C+ A L +M
Sbjct: 171 LMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPG 230
Query: 206 RRVLPDVFTYNALIYGFC-----------IVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
R PD +TY LI +C I ++ EA ++ EM+ + PD T+N L+
Sbjct: 231 FRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLI 290
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
D K + A + M +G P+ +TYNS + Y + +E+ A ++ +M + G
Sbjct: 291 DGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHG 350
Query: 315 -PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVS 369
P +Y+ +I+ L +T++ EA +L+ EM ++P TY + D L G S
Sbjct: 351 VPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLAS 406
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 111/257 (43%), Gaps = 27/257 (10%)
Query: 74 TLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHV 133
++T L+ C + + A + ++ + +PD + T++ LC G + A D +
Sbjct: 167 SITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQM 226
Query: 134 VAQGFRL--DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDK 191
GFR D TY ILI+ C+ G + +R +
Sbjct: 227 QLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIR------------------------R 262
Query: 192 LVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFN 251
+ +A ++ EML R +PDV TYN LI G C +++ A +L ++M TK P+ T+N
Sbjct: 263 RMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYN 322
Query: 252 ILVDALGKEGNVKEAKTVLAVMMKQGVK-PDIITYNSLMDGYCLVSEVNKAKDIFNSMPQ 310
+ ++ A ++ M K G P TY L+ +A+D+ M +
Sbjct: 323 SFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVE 382
Query: 311 RGIAPNVHSYSIMINGL 327
G+ P ++Y ++ + L
Sbjct: 383 AGLVPREYTYKLVCDAL 399
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 104/211 (49%), Gaps = 16/211 (7%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGIS--PDIFTLTI 77
+A++ F R+ P + +N I+ +L ++ ++ A L Q+ G PD +T TI
Sbjct: 183 EALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTI 242
Query: 78 LINCYCN-----------QAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA 126
LI+ YC + ++ A + ++L RG+ PD +T+ L+ G C ++ A
Sbjct: 243 LISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRA 302
Query: 127 LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQ--GQLVKPDVEMYTIII 184
L+ + + +G +QVTY I + A+++MR ++ G V P YT +I
Sbjct: 303 LELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGV-PGSSTYTPLI 361
Query: 185 HSFCKDKLVSDAYNLYSEMLARRVLPDVFTY 215
H+ + + ++A +L EM+ ++P +TY
Sbjct: 362 HALVETRRAAEARDLVVEMVEAGLVPREYTY 392
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 128/288 (44%), Gaps = 46/288 (15%)
Query: 78 LINCYCNQA-QITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTAL--QFHDHVV 134
L+ Y N A +I A +L + G P + +F + LN V L + H V
Sbjct: 137 LMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFI-----LNLLVSAKLFDEIHKIFV 191
Query: 135 AQ---GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDK 191
+ G +D ILI GLC+ G AALQ
Sbjct: 192 SAPKLGVEIDACCLNILIKGLCESGNLEAALQ---------------------------- 223
Query: 192 LVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFN 251
L E ++ P+V T++ LI GFC + +EA KLL+ M + I PD TFN
Sbjct: 224 -------LLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFN 276
Query: 252 ILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQR 311
IL+ L K+G V+E +L M +G +P+ TY ++ G +AK++ + M
Sbjct: 277 ILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISW 336
Query: 312 GIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLI 359
G+ P+ SY M+ GLC+TK V E +L +M +P T+ + ++
Sbjct: 337 GMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVV 384
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 107/236 (45%), Gaps = 3/236 (1%)
Query: 64 DFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQV 123
DF G P + ++N + + K G D L+KGLC +G +
Sbjct: 160 DF-GCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNL 218
Query: 124 QTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTII 183
+ ALQ D Q R + +T+ LI G C G+ A +L+ +++ + ++PD + I+
Sbjct: 219 EAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNIL 278
Query: 184 IHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNI 243
I K V + +L M + P+ TY ++YG + EA +++ +M++ +
Sbjct: 279 ISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGM 338
Query: 244 HPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVN 299
P ++ +V L + +V E VL M+ G P + + ++ C+VS+ N
Sbjct: 339 RPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQ--CVVSKNN 392
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 93/194 (47%)
Query: 175 PDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKL 234
P + + I++ KL + + ++ V D N LI G C L+ A +L
Sbjct: 165 PSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQL 224
Query: 235 LDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCL 294
LDE + P+ TF+ L+ +G +EA +L M K+ ++PD IT+N L+ G
Sbjct: 225 LDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRK 284
Query: 295 VSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVT 354
V + D+ M +G PN +Y ++ GL K+ EA ++++M + P ++
Sbjct: 285 KGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLS 344
Query: 355 YSSLIDGLCKSGRV 368
Y ++ GLC++ V
Sbjct: 345 YKKMVLGLCETKSV 358
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 4/206 (1%)
Query: 174 KPDVEMYTIIIHSFCKDKLVSDAYNLYS--EMLARRVLPDVFTYNAL-IYGFCIVSQLKE 230
+P +Y ++I+ F + K+ + + ++ R + F YN + IYG + ++
Sbjct: 92 QPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYG-NLAGRINR 150
Query: 231 ATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMD 290
A ++L M P + +FN +++ L E + K GV+ D N L+
Sbjct: 151 AIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIK 210
Query: 291 GYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIP 350
G C + A + + PQ+ PNV ++S +I G C K +EA LL M+ + I P
Sbjct: 211 GLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEP 270
Query: 351 DTVTYSSLIDGLCKSGRVSHAWELVD 376
DT+T++ LI GL K GRV +L++
Sbjct: 271 DTITFNILISGLRKKGRVEEGIDLLE 296
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 75/137 (54%)
Query: 243 IHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAK 302
+ DA NIL+ L + GN++ A +L +Q +P+++T++ L+ G+C + +A
Sbjct: 198 VEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAF 257
Query: 303 DIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGL 362
+ M + I P+ +++I+I+GL K +V+E ++LL M K P+ TY ++ GL
Sbjct: 258 KLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGL 317
Query: 363 CKSGRVSHAWELVDDVI 379
R A E++ +I
Sbjct: 318 LDKKRNLEAKEMMSQMI 334
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 88/188 (46%), Gaps = 2/188 (1%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
N ++ L + + A+ L + P++ T + LI +CN+ + AF +L ++
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERME 264
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
K PDTITF L+ GL G+V+ + + + +G + TY+ ++ GL +
Sbjct: 265 KERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNL 324
Query: 160 AALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
A ++M Q+ ++P Y ++ C+ K V + + +M+ +P + ++
Sbjct: 325 EAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVV 384
Query: 220 YGFCIVSQ 227
C+VS+
Sbjct: 385 Q--CVVSK 390
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/169 (17%), Positives = 73/169 (43%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N + A+ + + + P ++ F+ ++ + A L +++ I PD T
Sbjct: 217 NLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFN 276
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
ILI+ + ++ +L ++ +G P+ T+ ++ GL + A + +++
Sbjct: 277 ILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISW 336
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIH 185
G R ++Y+ ++ GLC+ ++RQ+ P M+ ++
Sbjct: 337 GMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQ 385
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 148/327 (45%), Gaps = 6/327 (1%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
+N A+ I+ + S + N IL+ LVK + I L Q+ G+ PD+ T
Sbjct: 145 KNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTY 204
Query: 76 -TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
T+L C + A ++ ++ G + D++ + T++ NG+ + A F +
Sbjct: 205 NTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMK 264
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
+G + Y L+N G + A +LM +++ + P+ M T ++ + K L
Sbjct: 265 VEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFD 324
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
+ L SE+ + + Y L+ G +L+EA + D+M K + D Y +I++
Sbjct: 325 RSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMI 384
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
AL + KEAK + K D++ N+++ YC E+ + M ++ ++
Sbjct: 385 SALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVS 444
Query: 315 PNVHSYSIMINGLCKTKKVDEALNLLA 341
P+ +++ I+I K E L+LLA
Sbjct: 445 PDYNTFHILIKYFIK-----EKLHLLA 466
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 166/369 (44%), Gaps = 9/369 (2%)
Query: 2 SSFLRLKNSLPPSIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSH 61
+S+L K+++ R++D + L R++ + + N IL + I L
Sbjct: 67 NSYLARKSAISEVQRSSD----FLSSLQRLATVLKVQDLNVILRDFGISGRWQDLIQLFE 122
Query: 62 QLDFTG-ISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLN 120
+ G IS ++ I + ++ A + I + + +++ L N
Sbjct: 123 WMQQHGKISVSTYSSCIK---FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKN 179
Query: 121 GQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR-AALQLMRQIQGQLVKPDVEM 179
G++ + ++ D + G + D VTY L+ G K+ A++L+ ++ ++ D M
Sbjct: 180 GKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVM 239
Query: 180 YTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMV 239
Y ++ + +A N +M P+++ Y++L+ + K+A +L+ EM
Sbjct: 240 YGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMK 299
Query: 240 TKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVN 299
+ + P+ L+ K G ++ +L+ + G + + Y LMDG ++
Sbjct: 300 SIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLE 359
Query: 300 KAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLI 359
+A+ IF+ M +G+ + ++ SIMI+ LC++K+ EA L + + D V ++++
Sbjct: 360 EARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTML 419
Query: 360 DGLCKSGRV 368
C++G +
Sbjct: 420 CAYCRAGEM 428
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 130/291 (44%), Gaps = 11/291 (3%)
Query: 90 SAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILI 149
S+ LA +LK +++ ++G+ Q +Q + + G ++ TY I
Sbjct: 87 SSLQRLATVLK------VQDLNVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSSCI 139
Query: 150 NGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVL 209
AL++ + I + K +V + I+ K+ + L+ +M +
Sbjct: 140 K-FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLK 198
Query: 210 PDVFTYNALIYGFCIVSQ--LKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAK 267
PDV TYN L+ G CI + +A +L+ E+ I D+ + ++ G +EA+
Sbjct: 199 PDVVTYNTLLAG-CIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAE 257
Query: 268 TVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGL 327
+ M +G P+I Y+SL++ Y + KA ++ M G+ PN + ++
Sbjct: 258 NFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVY 317
Query: 328 CKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
K D + LL+E++ + + Y L+DGL K+G++ A + DD+
Sbjct: 318 IKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDM 368
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 127/261 (48%), Gaps = 11/261 (4%)
Query: 123 VQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTI 182
V AL+ + + + +++ +++ L K G+ + ++L Q++ +KPDV Y
Sbjct: 147 VSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNT 206
Query: 183 IIHSFCKDKLVSDAYNLYSEMLARRVLP-DVFTYNALIYGFCIV-----SQLKEATKLLD 236
++ K V + Y E++ LP + ++++YG + + +EA +
Sbjct: 207 LLAGCIK---VKNGYPKAIELIGE--LPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQ 261
Query: 237 EMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVS 296
+M + P+ Y ++ L+++ +G+ K+A ++ M G+ P+ + +L+ Y
Sbjct: 262 QMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGG 321
Query: 297 EVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYS 356
++++++ + + G A N Y ++++GL K K++EA ++ +M K + D S
Sbjct: 322 LFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANS 381
Query: 357 SLIDGLCKSGRVSHAWELVDD 377
+I LC+S R A EL D
Sbjct: 382 IMISALCRSKRFKEAKELSRD 402
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 103/231 (44%), Gaps = 5/231 (2%)
Query: 18 ADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTI 77
+++A + ++ +P I ++ +L S Y A L ++ G+ P+ +T
Sbjct: 253 SEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTT 312
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
L+ Y + +L+++ GY + + + LM GL G+++ A D + +G
Sbjct: 313 LLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKG 372
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
R D I+I+ LC+ + + A +L R + K D+ M ++ ++C+ +
Sbjct: 373 VRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVM 432
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAY 248
+ +M + V PD T++ LI F +KE LL T ++H +
Sbjct: 433 RMMKKMDEQAVSPDYNTFHILIKYF-----IKEKLHLLAYQTTLDMHSKGH 478
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 124/266 (46%)
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
+I ++ AF K + G + DT T+ LM G A + ++ +
Sbjct: 249 VIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTD 308
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
LD TY ++I L K G+ AA +L +Q++ + ++P +++ ++ S K + +
Sbjct: 309 SLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSM 368
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
+Y EM P + +LI + +L A +L DEM P+ + +++++
Sbjct: 369 KVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESH 428
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
K G ++ A TV M K G P TY+ L++ + +V+ A I+NSM G+ P +
Sbjct: 429 AKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGL 488
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEM 343
SY ++ L + VD A +L EM
Sbjct: 489 SSYISLLTLLANKRLVDVAGKILLEM 514
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%)
Query: 144 TYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEM 203
Y +I L K + A ++ Q K D + Y ++ F L A+ +Y M
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 204 LARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNV 263
L D TY +I +L A KL +M + + P F+ LVD++GK G +
Sbjct: 305 EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 264 KEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIM 323
+ V M G +P + SL+D Y +++ A +++ M + G PN Y+++
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 324 INGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
I K+ K++ A+ + +M+ +P TYS L++ SG+V A ++ + +
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSM 479
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 96/223 (43%)
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G ++D TY L+ G A ++ ++ D Y +II S K + A
Sbjct: 273 GCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAA 332
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
+ L+ +M R++ P +++L+ +L + K+ EM P A F L+D+
Sbjct: 333 FKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDS 392
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
K G + A + M K G +P+ Y +++ + ++ A +F M + G P
Sbjct: 393 YAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPT 452
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLI 359
+YS ++ + +VD A+ + M + P +Y SL+
Sbjct: 453 PSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLL 495
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 123/294 (41%), Gaps = 1/294 (0%)
Query: 71 DIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFH 130
D T ++I ++ +AF + ++ +R RP F++L+ + G++ T+++ +
Sbjct: 312 DGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVY 371
Query: 131 DHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKD 190
+ G R + LI+ K G+ AL+L +++ +P+ +YT+II S K
Sbjct: 372 MEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKS 431
Query: 191 KLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTF 250
+ A ++ +M LP TY+ L+ Q+ A K+ + M + P ++
Sbjct: 432 GKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSY 491
Query: 251 NILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQ 310
L+ L + V A +L M G D+ + LM Y + V+ A M
Sbjct: 492 ISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMI-YIKDASVDLALKWLRFMGS 550
Query: 311 RGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCK 364
GI N + K D A LL + D V Y+S++ L +
Sbjct: 551 SGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVR 604
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 116/271 (42%), Gaps = 1/271 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A +F ++ P F+ ++ S+ K T++ + ++ G P L
Sbjct: 330 DAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSL 389
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ Y ++ +A + ++ K G+RP+ +T +++ +G+++ A+ + GF
Sbjct: 390 IDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGF 449
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
TY L+ GQ +A+++ + ++P + Y ++ +LV A
Sbjct: 450 LPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGK 509
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
+ EM A DV + L+ + + + A K L M + I + + L ++
Sbjct: 510 ILLEMKAMGYSVDVCASDVLMI-YIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCM 568
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLM 289
K G A+ +L ++ K D++ Y S++
Sbjct: 569 KNGLYDSARPLLETLVHSAGKVDLVLYTSIL 599
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 99/240 (41%), Gaps = 1/240 (0%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
+ I+ SL K A L Q+ + P + L++ ++ ++ V ++
Sbjct: 316 YELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQ 375
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
G+RP F +L+ G++ TAL+ D + GFR + Y ++I K G+
Sbjct: 376 GFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLE 435
Query: 160 AALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
A+ + + ++ P Y+ ++ V A +Y+ M + P + +Y +L+
Sbjct: 436 VAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLL 495
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVK 279
+ A K+L EM D ++L+ + K+ +V A L M G+K
Sbjct: 496 TLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYI-KDASVDLALKWLRFMGSSGIK 554
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 108/203 (53%), Gaps = 13/203 (6%)
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
+D Y I+I+GLCK G+ A + + ++PDV+ Y ++I + + A L
Sbjct: 12 MDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKL 67
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
Y+EM+ R ++PD TYN++I+G C ++L +A K + TFN L++ K
Sbjct: 68 YAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARK---------VSKSCSTFNTLINGYCK 118
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
VK+ + M ++G+ ++ITY +L+ G+ V + N A DIF M G+ + +
Sbjct: 119 ATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSIT 178
Query: 320 YSIMINGLCKTKKVDEALNLLAE 342
+ ++ LC K++ +A+ +L +
Sbjct: 179 FRDILPQLCSRKELRKAVAMLLQ 201
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 100/200 (50%), Gaps = 13/200 (6%)
Query: 176 DVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLL 235
D Y IIIH CK +A N+++ +L + PDV TYN +I S L A KL
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR----FSSLGRAEKLY 68
Query: 236 DEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLV 295
EM+ + + PD T+N ++ L K+ + +A+ V T+N+L++GYC
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTFNTLINGYCKA 119
Query: 296 SEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTY 355
+ V ++F M +RGI NV +Y+ +I+G + + AL++ EM + ++T+
Sbjct: 120 TRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITF 179
Query: 356 SSLIDGLCKSGRVSHAWELV 375
++ LC + A ++
Sbjct: 180 RDILPQLCSRKELRKAVAML 199
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 95/171 (55%), Gaps = 17/171 (9%)
Query: 211 DVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV--DALGKEGNVKEAKT 268
D YN +I+G C + EA + ++ + PD T+N+++ +LG+ A+
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSLGR------AEK 66
Query: 269 VLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLC 328
+ A M+++G+ PD ITYNS++ G C +++ +A R ++ + +++ +ING C
Sbjct: 67 LYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGYC 117
Query: 329 KTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
K +V + +NL EM + I+ + +TY++LI G + G + A ++ +++
Sbjct: 118 KATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMV 168
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 16/206 (7%)
Query: 71 DIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFH 130
D I+I+ C + A ++ +L G +PD T+ +++ L A + +
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSLG----RAEKLY 68
Query: 131 DHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKD 190
++ +G D +TY +I+GLCK Q + A Q + V + +I+ +CK
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCK--QNKLA-------QARKVSKSCSTFNTLINGYCKA 119
Query: 191 KLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTF 250
V D NL+ EM R ++ +V TY LI+GF V A + EMV+ ++ + TF
Sbjct: 120 TRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITF 179
Query: 251 NILVDALGKEGNVKEAKTVLAVMMKQ 276
D L + + KE + +A+++++
Sbjct: 180 R---DILPQLCSRKELRKAVAMLLQK 202
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 86/196 (43%), Gaps = 13/196 (6%)
Query: 106 DTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLM 165
DT + ++ GLC G+ A +++ G + D TY ++I +G RA
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLG--RAEKLYA 69
Query: 166 RQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIV 225
I+ LV PD Y +IH CK ++ AR+V T+N LI G+C
Sbjct: 70 EMIRRGLV-PDTITYNSMIHGLCKQNKLAQ---------ARKVSKSCSTFNTLINGYCKA 119
Query: 226 SQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITY 285
+++K+ L EM + I + T+ L+ + G+ A + M+ GV IT+
Sbjct: 120 TRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITF 179
Query: 286 NSLMDGYCLVSEVNKA 301
++ C E+ KA
Sbjct: 180 RDILPQLCSRKELRKA 195
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 71/127 (55%), Gaps = 6/127 (4%)
Query: 269 VLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLC 328
+ VM + + D YN ++ G C + ++A +IF ++ G+ P+V +Y++MI
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 329 KTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVIFIFNVWMS- 387
+ + A L AEM + ++PDT+TY+S+I GLCK +++ A + V FN ++
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARK-VSKSCSTFNTLING 115
Query: 388 YAKAIKL 394
Y KA ++
Sbjct: 116 YCKATRV 122
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 9/147 (6%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A ++ ++R P I +N ++ L K A +S T LIN
Sbjct: 64 AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLIN 114
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
YC ++ ++ ++ +RG + IT+TTL+ G G TAL +V+ G
Sbjct: 115 GYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYS 174
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQ 167
+T+R ++ LC + R A+ ++ Q
Sbjct: 175 SSITFRDILPQLCSRKELRKAVAMLLQ 201
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 145/285 (50%), Gaps = 27/285 (9%)
Query: 92 FSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILING 151
F+++ I RP L+ LC G++ A + D + + D VT+ +I G
Sbjct: 31 FNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITG 86
Query: 152 LCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPD 211
K+G R A +L ++ + +V +T ++ + + K +S A L+ EM R +
Sbjct: 87 YIKLGDMREARELFDRVDS---RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER----N 139
Query: 212 VFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLA 271
V ++N +I G+ ++ +A +L DEM +NI ++N +V AL + G + EA +
Sbjct: 140 VVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQRGRIDEAMNLFE 195
Query: 272 VMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTK 331
M ++ D++++ +++DG +V++A+ +F+ MP+R N+ S++ MI G +
Sbjct: 196 RMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWNAMITGYAQNN 247
Query: 332 KVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
++DEA L M + D +++++I G ++ ++ A L D
Sbjct: 248 RIDEADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLFD 288
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 75/126 (59%), Gaps = 11/126 (8%)
Query: 253 LVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG 312
L+ L K G + EA+ + + ++ D++T+ ++ GY + ++ +A+++F+ + R
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITGYIKLGDMREARELFDRVDSR- 106
Query: 313 IAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAW 372
NV +++ M++G ++K++ A L EM +N+ V+++++IDG +SGR+ A
Sbjct: 107 --KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNV----VSWNTMIDGYAQSGRIDKAL 160
Query: 373 ELVDDV 378
EL D++
Sbjct: 161 ELFDEM 166
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 74/421 (17%), Positives = 166/421 (39%), Gaps = 79/421 (18%)
Query: 22 VSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINC 81
+SI L + P ++ +N ++ + A+ L ++ +I + ++
Sbjct: 125 LSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMP----ERNIVSWNSMVKA 180
Query: 82 YCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHV-------- 133
+ +I A ++ ++ +R D +++T ++ GL NG+V A + D +
Sbjct: 181 LVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISW 236
Query: 134 ------VAQGFRLDQV-------------TYRILINGLCKMGQTRAALQLMRQIQGQLVK 174
AQ R+D+ ++ +I G + + A L ++ +
Sbjct: 237 NAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLF----DRMPE 292
Query: 175 PDVEMYTIIIHSFCKDKLVSDAYNLYSEMLAR-RVLPDVFTYNALIYGFCIVSQLKEATK 233
+V +T +I + ++K +A N++S+ML V P+V TY +++ ++ L E +
Sbjct: 293 KNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQ 352
Query: 234 LLDEMVTKNIHP----------------------------------DAYTFNILVDALGK 259
+ ++++K++H D ++N ++
Sbjct: 353 I-HQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAH 411
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP-NVH 318
G+ KEA + M K G KP +TY +L+ V K + F + + P
Sbjct: 412 HGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREE 471
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
Y+ +++ + ++ + N + +C + Y +++ VS A E+V V
Sbjct: 472 HYTCLVDLCGRAGRLKDVTNFI---NCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKV 528
Query: 379 I 379
+
Sbjct: 529 L 529
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 142/340 (41%), Gaps = 2/340 (0%)
Query: 14 SIRNADDAVSIFNRLLR-MSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDI 72
++ N + A + N LL M P+ +I +N + K K + L ++ GI PD
Sbjct: 151 NMTNPETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDN 210
Query: 73 FTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDH 132
T T +I+C A K+ G PD +T ++ G V AL +D
Sbjct: 211 ATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDR 270
Query: 133 VVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKL 192
+ +R+D VT+ LI G L + +++ VKP++ +Y +I S + K
Sbjct: 271 ARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKR 330
Query: 193 VSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNI 252
A +Y +++ P+ TY AL+ + +A + EM K + +N
Sbjct: 331 PWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNT 390
Query: 253 LVDALGKEGNVKEAKTVLAVMMK-QGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQR 311
L+ V EA + M + PD T++SL+ Y V++A+ M +
Sbjct: 391 LLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREA 450
Query: 312 GIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPD 351
G P + + +I K K+VD+ + ++ I PD
Sbjct: 451 GFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 159/372 (42%), Gaps = 43/372 (11%)
Query: 2 SSFLRLKNSLPPSIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTA-ISLS 60
SS ++L SL N D + + E + ++T L M + TA + L+
Sbjct: 110 SSLIKLAESLDACKPNEADVCDVITGF-----GGKLFEQDAVVT-LNNMTNPETAPLVLN 163
Query: 61 HQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLN 120
+ L+ S ++ + + + + + + ++L+RG +PD TFTT++ N
Sbjct: 164 NLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQN 223
Query: 121 GQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMY 180
G + A+++ + + + G D VT +I+ + G AL L + + + + D +
Sbjct: 224 GVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTF 283
Query: 181 TIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVT 240
+ +I + N+Y EM A V P++ YN LI
Sbjct: 284 STLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLI--------------------- 322
Query: 241 KNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNK 300
D++G+ +AK + ++ G P+ TY +L+ Y +
Sbjct: 323 --------------DSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDD 368
Query: 301 AKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM-DCKNIIPDTVTYSSLI 359
A I+ M ++G++ V Y+ +++ + VDEA + +M +C+ PD+ T+SSLI
Sbjct: 369 ALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLI 428
Query: 360 DGLCKSGRVSHA 371
SGRVS A
Sbjct: 429 TVYACSGRVSEA 440
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 2/237 (0%)
Query: 143 VTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSE 202
+ Y + + K + +L ++ + +KPD +T II ++ + A + +
Sbjct: 176 ILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEK 235
Query: 203 MLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGN 262
M + PD T A+I + + A L D T+ DA TF+ L+ G GN
Sbjct: 236 MSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGN 295
Query: 263 VKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSI 322
+ M GVKP+++ YN L+D +AK I+ + G PN +Y+
Sbjct: 296 YDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAA 355
Query: 323 MINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGR-VSHAWELVDDV 378
++ + + D+AL + EM K + + Y++L+ +C R V A+E+ D+
Sbjct: 356 LVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLL-SMCADNRYVDEAFEIFQDM 411
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 124/266 (46%), Gaps = 6/266 (2%)
Query: 83 CNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQ 142
C+ Q +F +++ + DT F L++ LC + A + H + F+ D
Sbjct: 158 CSVRQTVESFWKFKRLVPDFF--DTACFNALLRTLCQEKSMTDARNVY-HSLKHQFQPDL 214
Query: 143 VTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSE 202
T+ IL++G + A + M+ G+ +KPDV Y +I +CKD+ + AY L +
Sbjct: 215 QTFNILLSGWKSSEEAEAFFEEMK---GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDK 271
Query: 203 MLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGN 262
M PDV TY +I G ++ Q +A ++L EM +PD +N +
Sbjct: 272 MREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARR 331
Query: 263 VKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSI 322
+ +A ++ M+K+G+ P+ TYN L +++ ++ +++ M PN S
Sbjct: 332 LGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMF 391
Query: 323 MINGLCKTKKVDEALNLLAEMDCKNI 348
+I + +KVD A+ L +M K
Sbjct: 392 LIKMFKRHEKVDMAMRLWEDMVVKGF 417
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 134/297 (45%), Gaps = 7/297 (2%)
Query: 65 FTGISPDIFT---LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNG 121
F + PD F L+ C + +T A +V LK ++PD TF L+ G
Sbjct: 170 FKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHS-LKHQFQPDLQTFNILLSGW---K 225
Query: 122 QVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYT 181
+ A F + + +G + D VTY LI+ CK + A +L+ +++ + PDV YT
Sbjct: 226 SSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYT 285
Query: 182 IIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTK 241
+I A + EM PDV YNA I FCI +L +A KL+DEMV K
Sbjct: 286 TVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKK 345
Query: 242 NIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKA 301
+ P+A T+N+ L ++ + + M+ P+ + L+ + +V+ A
Sbjct: 346 GLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMA 405
Query: 302 KDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSL 358
++ M +G ++++ LC KV+EA L EM K P V++ +
Sbjct: 406 MRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRI 462
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 117/240 (48%), Gaps = 4/240 (1%)
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
D + L+ LC+ A + ++ Q +PD++ + I++ + K +A
Sbjct: 178 FDTACFNALLRTLCQEKSMTDARNVYHSLKHQF-QPDLQTFNILLSGW---KSSEEAEAF 233
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+ EM + + PDV TYN+LI +C ++++A KL+D+M + PD T+ ++ LG
Sbjct: 234 FEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGL 293
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
G +A+ VL M + G PD+ YN+ + +C+ + A + + M ++G++PN +
Sbjct: 294 IGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATT 353
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
Y++ L + + L M +P+T + LI + +V A L +D++
Sbjct: 354 YNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMV 413
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 153/333 (45%), Gaps = 12/333 (3%)
Query: 14 SIRNADDAVSIFNRLLRMSPTPPIIE---FNKILTSLVKMKHYPTAISLSHQLDFTGISP 70
S+R ++ F RL+ P + FN +L +L + K A ++ H L P
Sbjct: 159 SVRQTVESFWKFKRLV-----PDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQ-FQP 212
Query: 71 DIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFH 130
D+ T IL++ + + + + F + +G +PD +T+ +L+ C + +++ A +
Sbjct: 213 DLQTFNILLSGWKSSEEAEAFFEEMKG---KGLKPDVVTYNSLIDVYCKDREIEKAYKLI 269
Query: 131 DHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKD 190
D + + D +TY +I GL +GQ A +++++++ PDV Y I +FC
Sbjct: 270 DKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIA 329
Query: 191 KLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTF 250
+ + DA L EM+ + + P+ TYN + + L + +L M+ P+ +
Sbjct: 330 RRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSC 389
Query: 251 NILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQ 310
L+ + V A + M+ +G + + L+D C +++V +A+ M +
Sbjct: 390 MFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVE 449
Query: 311 RGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM 343
+G P+ S+ + + K DE NL+ +M
Sbjct: 450 KGHRPSNVSFKRIKLLMELANKHDEVNNLIQKM 482
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 83/141 (58%)
Query: 238 MVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSE 297
M+ +I P T+N ++D K+ V +AK +L M +G PD++T+++L++GYC
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 298 VNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSS 357
V+ +IF M +RGI N +Y+ +I+G C+ +D A +LL EM + PD +T+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 358 LIDGLCKSGRVSHAWELVDDV 378
++ GLC + A+ +++D+
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 81/141 (57%)
Query: 203 MLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGN 262
ML + P TYN++I GFC ++ +A ++LD M +K PD TF+ L++ K
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 263 VKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSI 322
V + M ++G+ + +TY +L+ G+C V +++ A+D+ N M G+AP+ ++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 323 MINGLCKTKKVDEALNLLAEM 343
M+ GLC K++ +A +L ++
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 72/107 (67%)
Query: 273 MMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKK 332
M++ + P ITYNS++DG+C V+ AK + +SM +G +P+V ++S +ING CK K+
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 333 VDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
VD + + EM + I+ +TVTY++LI G C+ G + A +L++++I
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI 107
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 74/133 (55%)
Query: 143 VTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSE 202
+TY +I+G CK + A +++ + + PDV ++ +I+ +CK K V + ++ E
Sbjct: 11 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 70
Query: 203 MLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGN 262
M R ++ + TY LI+GFC V L A LL+EM++ + PD TF+ ++ L +
Sbjct: 71 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE 130
Query: 263 VKEAKTVLAVMMK 275
+++A +L + K
Sbjct: 131 LRKAFAILEDLQK 143
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 70/142 (49%)
Query: 28 LLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQ 87
+LR S P I +N ++ K A + + G SPD+ T + LIN YC +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 88 ITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRI 147
+ + + ++ +RG +T+T+TTL+ G C G + A + +++ G D +T+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 148 LINGLCKMGQTRAALQLMRQIQ 169
++ GLC + R A ++ +Q
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQ 142
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 79/147 (53%)
Query: 98 ILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQ 157
+L+ P TIT+ +++ G C +V A + D + ++G D VT+ LING CK +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 158 TRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNA 217
+++ ++ + + + YT +IH FC+ + A +L +EM++ V PD T++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 218 LIYGFCIVSQLKEATKLLDEMVTKNIH 244
++ G C +L++A +L+++ H
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQKSEDH 147
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 67/136 (49%)
Query: 175 PDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKL 234
P Y +I FCK V DA + M ++ PDV T++ LI G+C ++ ++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 235 LDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCL 294
EM + I + T+ L+ + G++ A+ +L M+ GV PD IT++ ++ G C
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 295 VSEVNKAKDIFNSMPQ 310
E+ KA I + +
Sbjct: 128 KKELRKAFAILEDLQK 143
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 67/136 (49%)
Query: 68 ISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTAL 127
I P T +I+ +C Q ++ A +L + +G PD +TF+TL+ G C +V +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 128 QFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSF 187
+ + +G + VTY LI+G C++G AA L+ ++ V PD + ++
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 188 CKDKLVSDAYNLYSEM 203
C K + A+ + ++
Sbjct: 126 CSKKELRKAFAILEDL 141
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
DDA + + + +P ++ F+ ++ K K + + ++ GI + T T L
Sbjct: 27 DDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTL 86
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTAL 127
I+ +C + +A +L +++ G PD ITF ++ GLC +++ A
Sbjct: 87 IHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 135
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 159/336 (47%), Gaps = 22/336 (6%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLD-FTGISPDIFT 74
R DA +F+ + P P +I + +L++ K Y A+ L + + G+ PD T
Sbjct: 212 REPVDARRVFDEM----PEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGST 267
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTL--MKGLCLNGQVQTALQFHDH 132
++ N ++ + K++ G + + ++L M G C G V+ A Q +
Sbjct: 268 FGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKC--GSVREARQVFNG 325
Query: 133 VVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKL 192
+ + + V++ L+ G C+ G+ A+++ R+++ + D+ + ++ +
Sbjct: 326 MSKK----NSVSWSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAA 377
Query: 193 VSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNI 252
V ++ + + R +V +ALI + + A+++ +M +N+ T+N
Sbjct: 378 VRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNM----ITWNA 433
Query: 253 LVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQR- 311
++ AL + G +EA + M+K+G+KPD I++ +++ V++ ++ F M +
Sbjct: 434 MLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSY 493
Query: 312 GIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKN 347
GI P YS MI+ L + +EA NLL +C+N
Sbjct: 494 GIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRN 529
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 152/341 (44%), Gaps = 44/341 (12%)
Query: 71 DIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFH 130
D + T +++ Y + A V +++ G + T ++ +K G+V+ FH
Sbjct: 127 DAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFH 186
Query: 131 DHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKD 190
V+ GF + L G R + R++ ++ +PDV +T ++ +F K+
Sbjct: 187 GVVITHGFEWNHFISSTLAY---LYGVNREPVD-ARRVFDEMPEPDVICWTAVLSAFSKN 242
Query: 191 KLVSDAYNLYSEM-LARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYT 249
L +A L+ M + ++PD T+ ++ + +LK+ ++ +++T I +
Sbjct: 243 DLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVV 302
Query: 250 FNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKA-------- 301
+ L+D GK G+V+EA+ V M K+ + +++++L+ GYC E KA
Sbjct: 303 ESSLLDMYGKCGSVREARQVFNGMSKK----NSVSWSALLGGYCQNGEHEKAIEIFREME 358
Query: 302 -----------------------KDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALN 338
K+I +RG NV S +I+ K+ +D A
Sbjct: 359 EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASR 418
Query: 339 LLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+ ++M +N+I T+++++ L ++GR A +D++
Sbjct: 419 VYSKMSIRNMI----TWNAMLSALAQNGRGEEAVSFFNDMV 455
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 133/309 (43%), Gaps = 14/309 (4%)
Query: 70 PDIFTLTILINCYCNQAQITSAFSVLAKILK-RGYRPDTITFTTLMKGLCLNGQVQTALQ 128
PD+ T +++ + A + + + +G PD TF T++ +++ +
Sbjct: 227 PDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKE 286
Query: 129 FHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFC 188
H ++ G + V L++ K G R A RQ+ + K + ++ ++ +C
Sbjct: 287 IHGKLITNGIGSNVVVESSLLDMYGKCGSVREA----RQVFNGMSKKNSVSWSALLGGYC 342
Query: 189 KDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAY 248
++ A ++ EM + D++ + ++ ++ ++ ++ + V + +
Sbjct: 343 QNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVI 398
Query: 249 TFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM 308
+ L+D GK G + A V + M + ++IT+N+++ +A FN M
Sbjct: 399 VESALIDLYGKSGCIDSASRVYSKMSIR----NMITWNAMLSALAQNGRGEEAVSFFNDM 454
Query: 309 PQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM-DCKNIIPDTVTYSSLIDGLCKSGR 367
++GI P+ S+ ++ T VDE N M I P T YS +ID L ++G
Sbjct: 455 VKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGL 514
Query: 368 VSHAWELVD 376
A L++
Sbjct: 515 FEEAENLLE 523
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 116/290 (40%), Gaps = 74/290 (25%)
Query: 126 ALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIH 185
+QFH HVV G D+ L++ K+G + R G+ VK D +T ++
Sbjct: 80 GIQFHAHVVKSGLETDRNVGNSLLSLYFKLGP--GMRETRRVFDGRFVK-DAISWTSMMS 136
Query: 186 SFCKDKLVSDAYNLYSEMLARRVLPDVFTYNA---------------------------- 217
+ K A ++ EM++ + + FT ++
Sbjct: 137 GYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEW 196
Query: 218 -------LIYGFCIVSQLKEATKLLDEM--------------VTKN------------IH 244
L Y + + + +A ++ DEM +KN +H
Sbjct: 197 NHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMH 256
Query: 245 ------PDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEV 298
PD TF ++ A G +K+ K + ++ G+ +++ +SL+D Y V
Sbjct: 257 RGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSV 316
Query: 299 NKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNI 348
+A+ +FN M ++ N S+S ++ G C+ + ++A+ + EM+ K++
Sbjct: 317 REARQVFNGMSKK----NSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL 362
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 164/359 (45%), Gaps = 6/359 (1%)
Query: 14 SIRNADDAVSIFNRLLRMSPTP-PIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDI 72
S+R + FN + S P I +N + SL + + ++ ++ G+ D
Sbjct: 162 SLREWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDN 221
Query: 73 FTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDH 132
T + +I C A ++ K G PD +T++ ++ +G+V+ L ++
Sbjct: 222 ITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYER 281
Query: 133 VVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKL 192
VA G++ D + + +L + G ++++++ VKP+V +Y ++ + +
Sbjct: 282 AVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGK 341
Query: 193 VSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNI 252
A +L++EML + P+ T AL+ + ++A +L +EM K D +N
Sbjct: 342 PGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNT 401
Query: 253 LVDALGKEGNVKEAKTVLAVMMKQGV--KPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQ 310
L++ G +EA+ + MK+ V +PD +Y ++++ Y + KA ++F M +
Sbjct: 402 LLNMCADIGLEEEAERLFND-MKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLK 460
Query: 311 RGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLID--GLCKSGR 367
G+ NV + ++ L K K++D+ + + + + PD L+ LC+S
Sbjct: 461 AGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSE 519
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 148/329 (44%), Gaps = 15/329 (4%)
Query: 38 IEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAK 97
I ++ I+T + Y AI ++ TG+ PD T + +++ Y ++ S+ +
Sbjct: 222 ITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYER 281
Query: 98 ILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQ 157
+ G++PD I F+ L K G + + + + V Y L+ + + G+
Sbjct: 282 AVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGK 341
Query: 158 TRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNA 217
A L ++ + P+ + T ++ + K + DA L+ EM A++ D YN
Sbjct: 342 PGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNT 401
Query: 218 LIYGFCIVSQLKEATKLLDEMVTK-NIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQ 276
L+ + +EA +L ++M PD +++ +++ G G ++A + M+K
Sbjct: 402 LLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKA 461
Query: 277 GVKPDIITYNSLMDGYCLVSEVNKAKDI------FNSMPQRGIAPNVHSYSIMINGLCKT 330
GV+ ++ M CLV + KAK I F+ +RG+ P+ +++ +
Sbjct: 462 GVQVNV------MGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALC 515
Query: 331 KKVDEALNLLAEMDCKNIIPDTVTYSSLI 359
+ ++A ++A ++ N VT+ +LI
Sbjct: 516 ESSEDAEKVMACLERAN--KKLVTFVNLI 542
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 124/262 (47%), Gaps = 9/262 (3%)
Query: 122 QVQTALQFHDHVVAQG-FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEM- 179
+ Q F + V ++ F ++ + Y + + L + G+ QL+ ++ ++VK VE+
Sbjct: 165 EWQKTHTFFNWVKSKSLFPMETIFYNVTMKSL-RFGRQ---FQLIEEMALEMVKDGVELD 220
Query: 180 ---YTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLD 236
Y+ II + L + A + M ++PD TY+A++ + +++E L +
Sbjct: 221 NITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYE 280
Query: 237 EMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVS 296
V PDA F++L G+ G+ + VL M VKP+++ YN+L++
Sbjct: 281 RAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAG 340
Query: 297 EVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYS 356
+ A+ +FN M + G+ PN + + ++ K + +AL L EM K D + Y+
Sbjct: 341 KPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYN 400
Query: 357 SLIDGLCKSGRVSHAWELVDDV 378
+L++ G A L +D+
Sbjct: 401 TLLNMCADIGLEEEAERLFNDM 422
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 133/298 (44%), Gaps = 10/298 (3%)
Query: 97 KILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMG 156
+++K G D IT++T++ A+++ + + G D+VTY +++ K G
Sbjct: 211 EMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSG 270
Query: 157 QTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYN 216
+ L L + KPD ++++ F + + EM + V P+V YN
Sbjct: 271 KVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYN 330
Query: 217 ALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQ 276
L+ + A L +EM+ + P+ T LV GK ++A + M +
Sbjct: 331 TLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAK 390
Query: 277 GVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQR-GIAPNVHSYSIMINGLCKTKKVDE 335
D I YN+L++ + +A+ +FN M + P+ SY+ M+N K ++
Sbjct: 391 KWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEK 450
Query: 336 ALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVIFIFNVWMSYAKAIK 393
A+ L EM + + + + L+ L K+ R +DDV+++F+ +S + +K
Sbjct: 451 AMELFEEMLKAGVQVNVMGCTCLVQCLGKAKR-------IDDVVYVFD--LSIKRGVK 499
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/184 (18%), Positives = 85/184 (46%), Gaps = 1/184 (0%)
Query: 197 YNLYSEMLARRVLP-DVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
+ ++ + ++ + P + YN + Q + ++ EMV + D T++ ++
Sbjct: 170 HTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIIT 229
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
+ +A M K G+ PD +TY++++D Y +V + ++ G P
Sbjct: 230 CAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKP 289
Query: 316 NVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
+ ++S++ + D +L EM ++ P+ V Y++L++ + ++G+ A L
Sbjct: 290 DAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLF 349
Query: 376 DDVI 379
++++
Sbjct: 350 NEML 353
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 150/366 (40%), Gaps = 11/366 (3%)
Query: 21 AVSIFNRLLRMSPTPPIIE-FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
A+ IFN L + P + + K+ L K A L + G+ P I T LI
Sbjct: 127 ALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLI 186
Query: 80 NCYCNQAQITSAFSVLAKILK-RGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
+ Y + AFS L + +PD TFT L+ C G+ + G
Sbjct: 187 SVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGV 246
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVK-----PDVEMYTIIIHSFCKDKLV 193
VTY +I+G K G + M + +++ PDV II S+ + +
Sbjct: 247 GCSTVTYNTIIDGYGKAGM----FEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNM 302
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
+ YS V PD+ T+N LI F K+ ++D M + T+NI+
Sbjct: 303 RKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIV 362
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
++ GK G +++ V M QGVKP+ ITY SL++ Y V K + + +
Sbjct: 363 IETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDV 422
Query: 314 APNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWE 373
+ ++ +IN + + L +M+ + PD +T++++I G E
Sbjct: 423 VLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQE 482
Query: 374 LVDDVI 379
L +I
Sbjct: 483 LEKQMI 488
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 88/209 (42%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P + N I+ S ++ S + G+ PDI T ILI + SV
Sbjct: 284 PDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSV 343
Query: 95 LAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCK 154
+ + KR + T+T+ +++ G+++ + QG + + +TY L+N K
Sbjct: 344 MDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSK 403
Query: 155 MGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFT 214
G ++RQI V D + II+++ + ++ LY +M R+ PD T
Sbjct: 404 AGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKIT 463
Query: 215 YNALIYGFCIVSQLKEATKLLDEMVTKNI 243
+ +I + +L +M++ +I
Sbjct: 464 FATMIKTYTAHGIFDAVQELEKQMISSDI 492
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 75/190 (39%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
RN S ++R M P I FN ++ S K Y S+ ++ S T
Sbjct: 300 RNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTY 359
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
I+I + +I V K+ +G +P++IT+ +L+ G V +V
Sbjct: 360 NIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVN 419
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
LD + +IN + G +L Q++ + KPD + +I ++ +
Sbjct: 420 SDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDA 479
Query: 196 AYNLYSEMLA 205
L +M++
Sbjct: 480 VQELEKQMIS 489
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 147/306 (48%), Gaps = 7/306 (2%)
Query: 68 ISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTAL 127
+ D ++I + ++ + A ++ ++ G PD IT+T+++ G C G++ A
Sbjct: 161 VCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAW 220
Query: 128 QFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQ----GQLVKPDVEMYTII 183
+ + L+ VTY ++ G+CK G AL+L+ +++ G L+ P+ YT++
Sbjct: 221 RLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLV 280
Query: 184 IHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQ-LKEATKLLDEMVTKN 242
I +FC+ + V +A + M R +P+ T LI G + +K +KL+D++V
Sbjct: 281 IQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLG 340
Query: 243 IHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAK 302
+ F+ +L + +EA+ + +M+ +GV+PD + + + CL+
Sbjct: 341 GVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCF 400
Query: 303 DIFNSMPQRGIAPNVHS--YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLID 360
++ + ++ + + S +++++ GLC+ EA L M K + +I+
Sbjct: 401 LLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIE 460
Query: 361 GLCKSG 366
L K+G
Sbjct: 461 ALKKTG 466
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 133/299 (44%), Gaps = 11/299 (3%)
Query: 83 CNQAQIT-SAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLD 141
CNQA + A VL K + DT+ + +++ G + A + G D
Sbjct: 140 CNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPD 199
Query: 142 QVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYS 201
+TY +ING C G+ A +L +++ + Y+ I+ CK + A L +
Sbjct: 200 VITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLA 259
Query: 202 EMLARR----VLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA- 256
EM + P+ TY +I FC +++EA +LD M + P+ T +L+
Sbjct: 260 EMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGV 319
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
L + +VK ++ ++K G ++S + +A+ IF M RG+ P+
Sbjct: 320 LENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPD 379
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIP--DTVTYSSLIDGLCKSGRVSHAWE 373
+ S + LC ++ + L E++ K++ D+ ++ L+ GLC+ G ++WE
Sbjct: 380 GLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQG---NSWE 435
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 230 EATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLM 289
EA +L + N+ D +N+++ +G++ A ++ M G+ PD+ITY S++
Sbjct: 148 EALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMI 207
Query: 290 DGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKN-- 347
+GYC +++ A + M + N +YS ++ G+CK+ ++ AL LLAEM+ ++
Sbjct: 208 NGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGG 267
Query: 348 --IIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
I P+ VTY+ +I C+ RV A ++D
Sbjct: 268 GLISPNAVTYTLVIQAFCEKRRVEEALLVLD 298
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 22/230 (9%)
Query: 144 TYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEM 203
T RI++ + AL ++R+ V D Y ++I F ++ A L EM
Sbjct: 132 TMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEM 191
Query: 204 LARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNV 263
+ PDV TY ++I G+C ++ +A +L EM + ++ T++ +++ + K G++
Sbjct: 192 DCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDM 251
Query: 264 KEAKTVLAVMMKQG----VKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
+ A +LA M K+ + P+ +TY ++ +C V +A + + M RG PN +
Sbjct: 252 ERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVT 311
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVS 369
++I G+ + DE D S LID L K G VS
Sbjct: 312 ACVLIQGVLEN---DE---------------DVKALSKLIDKLVKLGGVS 343
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 64/114 (56%)
Query: 265 EAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMI 324
EA VL + V D + YN ++ + ++N A + M G+ P+V +Y+ MI
Sbjct: 148 EALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMI 207
Query: 325 NGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
NG C K+D+A L EM + + ++VTYS +++G+CKSG + A EL+ ++
Sbjct: 208 NGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEM 261
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 135/300 (45%), Gaps = 8/300 (2%)
Query: 90 SAFSVLAKILKRGYRP-DTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRIL 148
+A +L L++ R D TF+ + + L G+ + A+ + D T +
Sbjct: 120 TAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAI 179
Query: 149 INGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRV 208
I+ LC G + AL +M + + ++ +Y ++ + + V +A + +M + +
Sbjct: 180 ISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGI 239
Query: 209 LPDVFTYNALIYGFCI-------VSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEG 261
PD+F +N+L+ C + EA ++ EM + I P + ++NIL+ LG+
Sbjct: 240 TPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTR 299
Query: 262 NVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYS 321
V+E+ +L M + G PD +Y ++ L K I + M +RG P Y
Sbjct: 300 RVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYY 359
Query: 322 IMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVIFI 381
+I LC ++V+ AL L +M ++ Y LI LCK G EL ++ + I
Sbjct: 360 DLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSI 419
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 125/310 (40%), Gaps = 42/310 (13%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
F+ + +LVK+ AI + LD D FT+T +I+ C++ + A V+
Sbjct: 141 FSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVM---- 196
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
H V G L YR L+ G +
Sbjct: 197 -----------------------------HHHKDVISGNELS--VYRSLLFGWSVQRNVK 225
Query: 160 AALQLMRQIQGQLVKPDVEMYTIIIHSFCK-------DKLVSDAYNLYSEMLARRVLPDV 212
A ++++ ++ + PD+ + ++ C+ LV +A N+ EM + ++ P
Sbjct: 226 EARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTS 285
Query: 213 FTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAV 272
+YN L+ +++E+ ++L++M PD ++ +V L G + ++
Sbjct: 286 MSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDE 345
Query: 273 MMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKK 332
M+++G +P+ Y L+ C V VN A +F M + + Y ++I LCK
Sbjct: 346 MIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGN 405
Query: 333 VDEALNLLAE 342
++ L E
Sbjct: 406 FEKGRELWEE 415
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 90/197 (45%), Gaps = 7/197 (3%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMK-------HYPTAISLSHQLDFTGI 68
RN +A + + TP + FN +LT L + P A+++ ++ I
Sbjct: 222 RNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKI 281
Query: 69 SPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQ 128
P + IL++C ++ + +L ++ + G PDT ++ +++ L L G+ Q
Sbjct: 282 QPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQ 341
Query: 129 FHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFC 188
D ++ +GFR ++ Y LI LC + + ALQL +++ V ++Y ++I C
Sbjct: 342 IVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLC 401
Query: 189 KDKLVSDAYNLYSEMLA 205
K L+ E L+
Sbjct: 402 KGGNFEKGRELWEEALS 418
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 142/313 (45%), Gaps = 2/313 (0%)
Query: 68 ISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTAL 127
++P + T +L++ + I A VL + + G D +TTL+ +G+V
Sbjct: 463 LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMF 522
Query: 128 QFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSF 187
+ + G + T+ LI+G + GQ A ++ + VKPD ++ +I +
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISAC 582
Query: 188 CKDKLVSDAYNLYSEMLARR--VLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHP 245
+ V A+++ +EM A + PD + AL+ C Q++ A ++ + I
Sbjct: 583 GQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRG 642
Query: 246 DAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIF 305
+ I V++ K G+ A ++ M ++ V PD + +++L+D +++A I
Sbjct: 643 TPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGIL 702
Query: 306 NSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKS 365
+GI SYS ++ C K +AL L ++ + P T ++LI LC+
Sbjct: 703 QDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEG 762
Query: 366 GRVSHAWELVDDV 378
++ A E +D++
Sbjct: 763 NQLPKAMEYLDEI 775
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 154/339 (45%), Gaps = 10/339 (2%)
Query: 27 RLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQA 86
R ++ P + FN +++ + A + + +G++ D T LI+
Sbjct: 457 RFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSG 516
Query: 87 QITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYR 146
++ + F V ++ G + TF L+ G GQV A + + ++ + D+V +
Sbjct: 517 KVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFN 576
Query: 147 ILINGLCKMGQTRAALQLMRQIQGQL--VKPDVEMYTIIIHSFCKDKLVSDAYNLYSEML 204
LI+ + G A ++ +++ + + PD ++ + C V A +Y +M+
Sbjct: 577 ALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVY-QMI 635
Query: 205 AR---RVLPDVFTYNALIYGFCIVSQLKE-ATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
+ R P+V+T + C S + A + +M K++ PD F+ L+D G
Sbjct: 636 HKYGIRGTPEVYT---IAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHA 692
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSY 320
+ EA +L QG++ I+Y+SLM C + KA +++ + + P + +
Sbjct: 693 KMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTM 752
Query: 321 SIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLI 359
+ +I LC+ ++ +A+ L E+ + P+T+TYS L+
Sbjct: 753 NALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLM 791
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 143/327 (43%), Gaps = 3/327 (0%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
+ +++S K + HQ+ +G+ ++ T LI+ Q+ AF +
Sbjct: 505 YTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILR 564
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLD--QVTYRILINGLCKMGQ 157
+ +PD + F L+ +G V A + A+ +D ++ L+ C GQ
Sbjct: 565 SKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQ 624
Query: 158 TRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNA 217
A ++ + I ++ E+YTI ++S K A ++Y +M + V PD ++A
Sbjct: 625 VERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSA 684
Query: 218 LIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQG 277
LI L EA +L + ++ I +++ L+ A + K+A + +
Sbjct: 685 LIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIK 744
Query: 278 VKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEAL 337
++P I T N+L+ C +++ KA + + + G+ PN +YS+++ + + +
Sbjct: 745 LRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSF 804
Query: 338 NLLAEMDCKNIIPDTVTYSSLIDGLCK 364
LL++ + P+ + I LCK
Sbjct: 805 KLLSQAKGDGVSPNLI-MCRCITSLCK 830
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 121/269 (44%), Gaps = 9/269 (3%)
Query: 68 ISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGY--RPDTITFTTLMKGLCLNGQVQT 125
+ PD LI+ + AF VLA++ + PD I+ LMK C GQV+
Sbjct: 568 VKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVER 627
Query: 126 ALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIH 185
A + + + G R Y I +N K G A + + ++ + V PD ++ +I
Sbjct: 628 AKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALID 687
Query: 186 SFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHP 245
K++ +A+ + + ++ + +Y++L+ C K+A +L +++ + + P
Sbjct: 688 VAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRP 747
Query: 246 DAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIF 305
T N L+ AL + + +A L + G+KP+ ITY+ LM + + +
Sbjct: 748 TISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLL 807
Query: 306 NSMPQRGIAPNVHSYSIM---INGLCKTK 331
+ G++PN+ IM I LCK +
Sbjct: 808 SQAKGDGVSPNL----IMCRCITSLCKRR 832
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 98/194 (50%), Gaps = 11/194 (5%)
Query: 189 KDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQ-LKEA---TKLLDEMVTKNIH 244
+D + D +L ++ R +L Y+A + C + +KEA TKL+ ++
Sbjct: 412 RDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAFRFTKLI-------LN 464
Query: 245 PDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDI 304
P TFN+L+ +++ A+ VL ++ + G+ D Y +L+ +V+ ++
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEV 524
Query: 305 FNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCK 364
F+ M G+ N+H++ +I+G + +V +A + KN+ PD V +++LI +
Sbjct: 525 FHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQ 584
Query: 365 SGRVSHAWELVDDV 378
SG V A++++ ++
Sbjct: 585 SGAVDRAFDVLAEM 598
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 169/389 (43%), Gaps = 45/389 (11%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P + N+IL SL + A +L+ G D T ILI C + I A
Sbjct: 321 PDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLY 380
Query: 95 LAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCK 154
L++I+ +GY+PD ++ ++ GL G Q D + G L T++I++ G CK
Sbjct: 381 LSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCK 440
Query: 155 MGQTRAALQLMRQIQG-------QLVKPDVEMYTIII-------------HSFCKDKLVS 194
Q A +++ ++ G ++ P E ++++ +F K +
Sbjct: 441 ARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFSKAEFFD 500
Query: 195 DAYN---LYSEM----------LARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTK 241
D N L++++ L R VLP+ +N+LI L+ A +LLDEM
Sbjct: 501 DLGNGLYLHTDLDAYEQRVNMVLDRSVLPE---FNSLIVRASEDGDLQTALRLLDEMARW 557
Query: 242 NIHPDAYTFNILVDAL-GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNK 300
+F +L+ +L +++ + ++L K + D T N L+ YC
Sbjct: 558 GQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYCKKGFSRH 617
Query: 301 AKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLID 360
+K IF+ M Q + +Y+ +I CK + +++ LN+ N +PD L +
Sbjct: 618 SKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLPDLNDCGDLWN 677
Query: 361 GLCKSGRVSHAWELVDDVIFIFN-VWMSY 388
L + G LV++V+ +F V++SY
Sbjct: 678 CLVRKG-------LVEEVVQLFERVFISY 699
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/362 (20%), Positives = 152/362 (41%), Gaps = 8/362 (2%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++ V +F R+ P + L + A S+ +L+ G + L
Sbjct: 686 EEVVQLFERVFISYPLSQSEACRIFVEKLTVLGFSCIAHSVVKRLEGEGCIVEQEVYNHL 745
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I C + + ++AF++L ++L + + P + L+ LC + TA + + +
Sbjct: 746 IKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQIDSS-- 803
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ LI GL G+ A +R + + ++Y ++ +CK
Sbjct: 804 ----YVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEE 859
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYT-FNILVDAL 257
+ M+ + ++ V +Y + C+ Q A L + ++ +P +N+L+ +
Sbjct: 860 VLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYM 919
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
+ N E VL M +GV PD T+N L+ GY ++ + + ++M +G+ PN
Sbjct: 920 FRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNN 979
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNI-IPDTVTYSSLIDGLCKSGRVSHAWELVD 376
S + + LC V +AL+L M+ K + +V + +++ L G + A + +
Sbjct: 980 RSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLT 1039
Query: 377 DV 378
V
Sbjct: 1040 RV 1041
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 3/197 (1%)
Query: 117 LCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPD 176
LCL+ +VQ A +VA G L+ Y + G + L + +++ +PD
Sbjct: 266 LCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEVK---YEPD 322
Query: 177 VEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLD 236
V + I+HS C+ AY E+ D T+ LI C +K A L
Sbjct: 323 VFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLS 382
Query: 237 EMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVS 296
E+++K PD Y++N ++ L ++G + +L M + G+ + T+ ++ GYC
Sbjct: 383 EIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKAR 442
Query: 297 EVNKAKDIFNSMPQRGI 313
+ +AK I N M G+
Sbjct: 443 QFEEAKRIVNKMFGYGL 459
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/394 (20%), Positives = 160/394 (40%), Gaps = 41/394 (10%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A +I + +L P + ++ L + TA +L+ Q+D + + LI
Sbjct: 758 AFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQIDSS------YVHYALIK 811
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
++ A + L +L G + + +G C + +V +
Sbjct: 812 GLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNIIC 871
Query: 141 DQVTYRILINGLCKMGQTRAALQLMR-QIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
+YR + +C Q+ +A+ L + G+ V +Y ++I + K + +
Sbjct: 872 SVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYMFRAKNHLEVNKV 931
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
EM R VLPD T+N L++G+ + + + L M++K + P+ + + +L
Sbjct: 932 LLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCD 991
Query: 260 EGNVKEAKTVLAVMMKQGVK-PDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI-APN- 316
G+VK+A + VM +G + +++ E+ KA+D + + G+ APN
Sbjct: 992 NGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPNY 1051
Query: 317 ----------------VH---------------SYSIMINGLCKTKKVDEALNLLAEMDC 345
VH SY +INGL + ++D+A++ EM
Sbjct: 1052 DNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVE 1111
Query: 346 KNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+ P T+S L+ C++ +V + L+ ++
Sbjct: 1112 LGLSPSISTWSGLVHKFCEACQVLESERLIKSMV 1145
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 129/304 (42%), Gaps = 35/304 (11%)
Query: 21 AVSIFNRLLRMSPTPP-IIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
A+S+ LL P +I +N ++ + + K++ + ++ G+ PD T L+
Sbjct: 892 AISLKEFLLLGESNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLV 951
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ Y + A +S+ L+ ++ +G +P+ + + LC NG V+ AL + ++G+
Sbjct: 952 HGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWN 1011
Query: 140 LD--------------------------QVT--------YRILINGLCKMGQTRAALQLM 165
L +VT Y +I L G A+ L+
Sbjct: 1012 LGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPNYDNIIKKLSDRGNLDIAVHLL 1071
Query: 166 RQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIV 225
+ P Y +I+ + + A + ++EM+ + P + T++ L++ FC
Sbjct: 1072 NTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEA 1131
Query: 226 SQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITY 285
Q+ E+ +L+ MV P F ++D E N +A ++ +M K G + D T+
Sbjct: 1132 CQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQKCGYEVDFETH 1191
Query: 286 NSLM 289
SL+
Sbjct: 1192 WSLI 1195
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 129/290 (44%), Gaps = 13/290 (4%)
Query: 86 AQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLN-GQVQTALQFHDHVVAQGFRLDQVT 144
+ +A +L ++ + G + +F LM+ LC + ++ ++ + ++LD T
Sbjct: 542 GDLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGET 601
Query: 145 YRILINGLCKMGQTRAALQLMRQIQGQLVKP-DVEMYTIIIHSFCKDKLVSDAYNLYSEM 203
L+ CK G +R + +L+ Q+ P D YT +I FCK + ++D N++
Sbjct: 602 LNFLVQEYCKKGFSRHS-KLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAA 660
Query: 204 LARRVLPDVFTYNALIYGFCIVSQ--LKEATKLLDEMVTKNIHPDAYTFNILVDALGKEG 261
LPD+ L C+V + ++E +L + + + I V+ L G
Sbjct: 661 QNDNWLPDLNDCGDLWN--CLVRKGLVEEVVQLFERVFISYPLSQSEACRIFVEKLTVLG 718
Query: 262 NVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYS 321
A +V+ + +G + YN L+ G C + + A I + M + P++ S
Sbjct: 719 FSCIAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCL 778
Query: 322 IMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
++I LC+ K A NL ++D + + +LI GL +G++ A
Sbjct: 779 MLIPRLCRANKAGTAFNLAEQID------SSYVHYALIKGLSLAGKMLDA 822
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 117/271 (43%), Gaps = 21/271 (7%)
Query: 103 YRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAAL 162
Y PD ++ LC + A + + + GF+ D+VT+ ILI C G + A+
Sbjct: 319 YEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAV 378
Query: 163 QLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGF 222
+ +I + KPDV Y I+ + L + + EM ++ + T+ ++ G+
Sbjct: 379 LYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGY 438
Query: 223 CIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTV-----LAVMMKQG 277
C Q +EA +++++M L++A E + EA ++ LAV +K+
Sbjct: 439 CKARQFEEAKRIVNKMFGYG----------LIEASKVEDPLSEAFSLVGFDPLAVRLKRD 488
Query: 278 VKPDIIT---YNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVD 334
++ L +G L ++++ + N + R + P +S +I + +
Sbjct: 489 NDSTFSKAEFFDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPEFNS---LIVRASEDGDLQ 545
Query: 335 EALNLLAEMDCKNIIPDTVTYSSLIDGLCKS 365
AL LL EM +++ L+ LC S
Sbjct: 546 TALRLLDEMARWGQKLSRRSFAVLMRSLCAS 576
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 139/365 (38%), Gaps = 50/365 (13%)
Query: 39 EFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYC-NQAQITSAFSVLAK 97
EFN ++ + TA+ L ++ G + +L+ C ++A + + S+L K
Sbjct: 530 EFNSLIVRASEDGDLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEK 589
Query: 98 ILKRGYRPDTITFTTLMKGLCLNG-QVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMG 156
K Y+ D T L++ C G + L FH +V +D VTY LI CK
Sbjct: 590 WPKLAYQLDGETLNFLVQEYCKKGFSRHSKLIFH-KMVQMHHPIDNVTYTSLIRCFCKKE 648
Query: 157 QTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY---------SEMLARR 207
L + Q PD+ + + + LV + L+ S+ A R
Sbjct: 649 TLNDLLNVWGAAQNDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVFISYPLSQSEACR 708
Query: 208 VLPDVFT--------------------------YNALIYGFCIVSQLKEATKLLDEMVTK 241
+ + T YN LI G C + A +LDEM+ K
Sbjct: 709 IFVEKLTVLGFSCIAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDK 768
Query: 242 NIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKA 301
P + +L+ L + K A + + + + Y +L+ G L ++ A
Sbjct: 769 KHIPSLGSCLMLIPRL-----CRANKAGTAFNLAEQIDSSYVHY-ALIKGLSLAGKMLDA 822
Query: 302 KDIFNSMPQRGIAPNVHSYSIMINGLCKTK---KVDEALNLLAEMDCKNIIPDTVTYSSL 358
++ M G++ Y++M G CK KV+E L L+ KNII +Y
Sbjct: 823 ENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVR---KNIICSVKSYREY 879
Query: 359 IDGLC 363
+ +C
Sbjct: 880 VRKMC 884
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 143/303 (47%), Gaps = 5/303 (1%)
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCL----NGQVQTALQFHDHV 133
L + + + + FS + ++L+ + D I + + L +G + A + D +
Sbjct: 89 LYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEM 148
Query: 134 VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQL-VKPDVEMYTIIIHSFCKDKL 192
++ L++ + A++ +++ +L + PD+ Y +I + C+
Sbjct: 149 PELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGS 208
Query: 193 VSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNI 252
+ D +++ E+ PD+ ++N L+ F E ++ D M +KN+ P+ ++N
Sbjct: 209 MDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNS 268
Query: 253 LVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG 312
V L + +A ++ VM +G+ PD+ TYN+L+ Y + + + + +N M ++G
Sbjct: 269 RVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKG 328
Query: 313 IAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAW 372
+ P+ +Y ++I LCK +D A+ + E ++ Y +++ L +G++ A
Sbjct: 329 LTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEAT 388
Query: 373 ELV 375
+LV
Sbjct: 389 QLV 391
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 100/204 (49%), Gaps = 1/204 (0%)
Query: 177 VEMYTIIIHSFCKDKLVSDAYNLYSEMLAR-RVLPDVFTYNALIYGFCIVSQLKEATKLL 235
V+ + ++ ++ K + +A + E+ + + PD+ TYN +I C + + +
Sbjct: 157 VKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIF 216
Query: 236 DEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLV 295
+E+ PD +FN L++ + E + +M + + P+I +YNS + G
Sbjct: 217 EELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRN 276
Query: 296 SEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTY 355
+ A ++ + M GI+P+VH+Y+ +I ++E + EM K + PDTVTY
Sbjct: 277 KKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTY 336
Query: 356 SSLIDGLCKSGRVSHAWELVDDVI 379
LI LCK G + A E+ ++ I
Sbjct: 337 CMLIPLLCKKGDLDRAVEVSEEAI 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/218 (18%), Positives = 93/218 (42%), Gaps = 1/218 (0%)
Query: 19 DDAVSIFNRL-LRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTI 77
D+A+ F L ++ TP ++ +N ++ +L + +S+ +L+ G PD+ +
Sbjct: 174 DEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNT 233
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
L+ + + + + + P+ ++ + ++GL N + AL D + +G
Sbjct: 234 LLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEG 293
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
D TY LI ++ +++ + + PD Y ++I CK + A
Sbjct: 294 ISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAV 353
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLL 235
+ E + ++L Y ++ ++ EAT+L+
Sbjct: 354 EVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLV 391
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 60/133 (45%)
Query: 34 TPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFS 93
+P I +N + L + K + A++L + GISPD+ T LI Y +
Sbjct: 260 SPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMK 319
Query: 94 VLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLC 153
++ ++G PDT+T+ L+ LC G + A++ + + Y+ ++ L
Sbjct: 320 CYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLM 379
Query: 154 KMGQTRAALQLMR 166
G+ A QL++
Sbjct: 380 GAGKIDEATQLVK 392
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 169/386 (43%), Gaps = 46/386 (11%)
Query: 5 LRLKNSLPPSIRNADDAVS-IFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQL 63
+++K + RN V I ++R P P +N I+ + MK A + ++
Sbjct: 8 VQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRI 67
Query: 64 DFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQV 123
P++F+ L+ Y I+ S K+ R D +T+ L++G L+G V
Sbjct: 68 P----QPNLFSWNNLLLAYSKAGLISEMESTFEKLPDR----DGVTWNVLIEGYSLSGLV 119
Query: 124 QTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTII 183
A++ ++ + + F + R+ + + K+ + + L +QI GQ++K E Y ++
Sbjct: 120 GAAVKAYN-TMMRDFSANLT--RVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLV 176
Query: 184 ----IHSFCKDKLVSDA--------------YN-LYSEMLA-----------RRVLPDVF 213
++ + +SDA YN L +LA R + D
Sbjct: 177 GSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSV 236
Query: 214 TYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVM 273
++ A+I G KEA + EM + + D Y F ++ A G G + E K + A +
Sbjct: 237 SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACI 296
Query: 274 MKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKV 333
++ + I ++L+D YC ++ AK +F+ M Q+ NV S++ M+ G +T +
Sbjct: 297 IRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK----NVVSWTAMVVGYGQTGRA 352
Query: 334 DEALNLLAEMDCKNIIPDTVTYSSLI 359
+EA+ + +M I PD T I
Sbjct: 353 EEAVKIFLDMQRSGIDPDHYTLGQAI 378
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 127/274 (46%), Gaps = 16/274 (5%)
Query: 99 LKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQT 158
L RG D++++ ++KGL NG + A++ + QG ++DQ + ++ +G
Sbjct: 227 LFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLG-- 284
Query: 159 RAALQLMRQIQGQLVKPDVEMY----TIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFT 214
A+ +QI +++ + + + + +I +CK K + A ++ M + +V +
Sbjct: 285 --AINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK----NVVS 338
Query: 215 YNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMM 274
+ A++ G+ + +EA K+ +M I PD YT + A +++E +
Sbjct: 339 WTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAI 398
Query: 275 KQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVD 334
G+ + NSL+ Y +++ + +FN M R + S++ M++ + +
Sbjct: 399 TSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR----DAVSWTAMVSAYAQFGRAV 454
Query: 335 EALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRV 368
E + L +M + PD VT + +I ++G V
Sbjct: 455 ETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLV 488
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/365 (18%), Positives = 142/365 (38%), Gaps = 48/365 (13%)
Query: 38 IEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAK 97
+ +N ++ L+ A+ L F G+ D + +I A +
Sbjct: 206 VMYNSLMGGLLACGMIEDALQL-----FRGMEKDSVSWAAMIKGLAQNGLAKEAIECFRE 260
Query: 98 ILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF------------------- 138
+ +G + D F +++ G + Q H ++ F
Sbjct: 261 MKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKC 320
Query: 139 ---------RLDQ---VTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS 186
R+ Q V++ ++ G + G+ A+++ +Q + PD I +
Sbjct: 321 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISA 380
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI--YGFCIVSQLKEATKLLDEMVTKNIH 244
+ + + + + ++ V N+L+ YG C + ++T+L +EM +
Sbjct: 381 CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKC--GDIDDSTRLFNEMNVR--- 435
Query: 245 PDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDI 304
DA ++ +V A + G E + M++ G+KPD +T ++ V K +
Sbjct: 436 -DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRY 494
Query: 305 FNSM-PQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLC 363
F M + GI P++ YS MI+ ++ +++EA+ + M PD + +++L+
Sbjct: 495 FKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP---FPPDAIGWTTLLSACR 551
Query: 364 KSGRV 368
G +
Sbjct: 552 NKGNL 556
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 108/214 (50%), Gaps = 1/214 (0%)
Query: 163 QLMRQIQGQL-VKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYG 221
+L ++ G+L +KPD+ Y +I + C+ + +A L E+ + + PD+ T+N L+
Sbjct: 165 ELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLS 224
Query: 222 FCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPD 281
+ Q + ++ +MV KN+ D T+N + L E KE + + G+KPD
Sbjct: 225 SYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPD 284
Query: 282 IITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLA 341
+ ++N+++ G ++++A+ + + + G P+ ++++++ +CK + A+ L
Sbjct: 285 VFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFK 344
Query: 342 EMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
E K + T L+D L K + A E+V
Sbjct: 345 ETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIV 378
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 113/255 (44%), Gaps = 1/255 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFT-GISPDIFTLTI 77
++A +F + ++ FN +L++ K + L ++L I PDI +
Sbjct: 126 ENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNT 185
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
LI C + + A ++L +I +G +PD +TF TL+ L GQ + + +V +
Sbjct: 186 LIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKN 245
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
+D TY + GL +++ + L +++ +KPDV + +I + + +A
Sbjct: 246 VAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAE 305
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
Y E++ PD T+ L+ C + A +L E +K T LVD L
Sbjct: 306 AWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDEL 365
Query: 258 GKEGNVKEAKTVLAV 272
K +EA+ ++ +
Sbjct: 366 VKGSKREEAEEIVKI 380
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
Query: 205 ARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVT-KNIHPDAYTFNILVDALGKEGNV 263
+ R ++ Y+ + +L ++L+E +++ + + I + GK G
Sbjct: 67 SERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARI-ISLYGKAGMF 125
Query: 264 KEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQR-GIAPNVHSYSI 322
+ A+ V M + K ++++N+L+ Y L + + +++FN +P + I P++ SY+
Sbjct: 126 ENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNT 185
Query: 323 MINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLI 359
+I LC+ + EA+ LL E++ K + PD VT+++L+
Sbjct: 186 LIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLL 222
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 144/310 (46%), Gaps = 12/310 (3%)
Query: 69 SPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQ 128
+P++F +LI C+ A+ + AF ++LK PD ITF L+K V Q
Sbjct: 79 NPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQ 138
Query: 129 FHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFC 188
H +V GF+ D L++ G AA +I GQ+ DV +T ++ +C
Sbjct: 139 THSQIVRFGFQNDVYVENSLVHMYANCGFIAAA----GRIFGQMGFRDVVSWTSMVAGYC 194
Query: 189 KDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAY 248
K +V +A ++ EM R ++FT++ +I G+ + ++A L + M + + +
Sbjct: 195 KCGMVENAREMFDEMPHR----NLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANET 250
Query: 249 TFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM 308
++ + G ++ + ++K + ++I +L+D + ++ KA +F +
Sbjct: 251 VMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGL 310
Query: 309 PQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRV 368
P+ + S+S +I GL +A++ ++M IP VT+++++ G V
Sbjct: 311 PE----TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLV 366
Query: 369 SHAWELVDDV 378
E+ +++
Sbjct: 367 EKGLEIYENM 376
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 8/199 (4%)
Query: 168 IQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQ 227
I Q+ P++ ++ ++I F S A+ Y++ML R+ PD T+ LI +
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132
Query: 228 LKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNS 287
+ + ++V D Y N LV G + A + M G + D++++ S
Sbjct: 133 VLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQM---GFR-DVVSWTS 188
Query: 288 LMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKN 347
++ GYC V A+++F+ MP R N+ ++SIMING K ++A++L M +
Sbjct: 189 MVAGYCKCGMVENAREMFDEMPHR----NLFTWSIMINGYAKNNCFEKAIDLFEFMKREG 244
Query: 348 IIPDTVTYSSLIDGLCKSG 366
++ + S+I G
Sbjct: 245 VVANETVMVSVISSCAHLG 263
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/345 (19%), Positives = 150/345 (43%), Gaps = 17/345 (4%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A + ++L+ P I F ++ + +M+ Q+ G D++ L++
Sbjct: 101 AFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVH 160
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
Y N I +A + ++ G+R D +++T+++ G C G V+ A + D + +
Sbjct: 161 MYANCGFIAAAGRIFGQM---GFR-DVVSWTSMVAGYCKCGMVENAREMFDEMPHR---- 212
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
+ T+ I+ING K A+ L ++ + V + + +I S + Y
Sbjct: 213 NLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAY 272
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
++ + ++ AL+ F +++A + + + D+ +++ ++ L
Sbjct: 273 EYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPE----TDSLSWSSIIKGLAVH 328
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQ-RGIAPNVHS 319
G+ +A + M+ G P +T+ +++ V K +I+ +M + GI P +
Sbjct: 329 GHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEH 388
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCK 364
Y +++ L + K+ EA N + +M K P+ +L+ G CK
Sbjct: 389 YGCIVDMLGRAGKLAEAENFILKMHVK---PNAPILGALL-GACK 429
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 132/285 (46%), Gaps = 8/285 (2%)
Query: 82 YCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLD 141
Y + A + + + K+G P +T +T + G V+ Q H + G LD
Sbjct: 249 YVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELD 308
Query: 142 QVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYS 201
+ L+N CK+G ++ + ++ + DV + +II + + LV DA +
Sbjct: 309 NILGTSLLNFYCKVG----LIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQ 364
Query: 202 EMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEG 261
M ++ D T L+ LK ++ + + D + ++D K G
Sbjct: 365 LMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCG 424
Query: 262 NVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYS 321
++ +AK V V+ D+I +N+L+ Y +A +F M G+ PNV +++
Sbjct: 425 SIVDAKKVF----DSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWN 480
Query: 322 IMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
++I L + +VDEA ++ +M IIP+ ++++++++G+ ++G
Sbjct: 481 LIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNG 525
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 148/336 (44%), Gaps = 12/336 (3%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
DDA +F+ + P + +N ++ V+ AI L + G+ P T++
Sbjct: 225 DDASKVFDEI----PDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTC 280
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
++ N + A + G D I T+L+ C G ++ A D + F
Sbjct: 281 LSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRM----F 336
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D VT+ ++I+G + G A+ + + ++ + +K D ++ + + + +
Sbjct: 337 EKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKE 396
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
+ + D+ + ++ + + +A K+ D V K D +N L+ A
Sbjct: 397 VQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK----DLILWNTLLAAYA 452
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVH 318
+ G EA + M +GV P++IT+N ++ +V++AKD+F M GI PN+
Sbjct: 453 ESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLI 512
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVT 354
S++ M+NG+ + +EA+ L +M + P+ +
Sbjct: 513 SWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFS 548
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/357 (18%), Positives = 160/357 (44%), Gaps = 13/357 (3%)
Query: 24 IFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYC 83
+F+R+ ++ +N I++ V+ AI + + + D TL L++
Sbjct: 331 VFDRMFE----KDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAA 386
Query: 84 NQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQV 143
+ V ++ + D + +T+M G + A + D V + D +
Sbjct: 387 RTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK----DLI 442
Query: 144 TYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEM 203
+ L+ + G + AL+L +Q + V P+V + +II S ++ V +A +++ +M
Sbjct: 443 LWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQM 502
Query: 204 LARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNV 263
+ ++P++ ++ ++ G +EA L +M + P+A++ + + A ++
Sbjct: 503 QSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASL 562
Query: 264 KEAKTVLAVMMKQGVKPDIITYN-SLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSI 322
+T+ +++ +++ SL+D Y ++NKA+ +F S + + +
Sbjct: 563 HIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSK----LYSELPLSNA 618
Query: 323 MINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
MI+ + EA+ L ++ + PD +T ++++ +G ++ A E+ D++
Sbjct: 619 MISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIV 675
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 128/290 (44%), Gaps = 27/290 (9%)
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
++ + P + ++ + LC NG+++ AL + + R+ Y ++ G
Sbjct: 28 EQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCV----YE 83
Query: 160 AALQLMRQIQGQLVKPD--------VEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPD 211
L +QI +++K +E +I ++ C DA + + ++ + +
Sbjct: 84 RDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKC------DALEIAEVLFSKLRVRN 137
Query: 212 VFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLA 271
VF++ A+I C + + A EM+ I PD + + A G + + V
Sbjct: 138 VFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHG 197
Query: 272 VMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTK 331
++K G++ + +SL D Y ++ A +F+ +P R N +++ ++ G +
Sbjct: 198 YVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDR----NAVAWNALMVGYVQNG 253
Query: 332 KVDEALNLLAEMDCKNIIPDTVTYSSLID-----GLCKSGRVSHAWELVD 376
K +EA+ L ++M + + P VT S+ + G + G+ SHA +V+
Sbjct: 254 KNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVN 303
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 131/338 (38%), Gaps = 53/338 (15%)
Query: 18 ADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTI 77
+ +A+ +F + P +I +N I+ SL++ A + Q+ +GI P++ + T
Sbjct: 457 SGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTT 516
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
++N A L K+ + G RP+ + T AL H+
Sbjct: 517 MMNGMVQNGCSEEAILFLRKMQESGLRPNAFSIT-------------VALSACAHL---- 559
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKP-------DVEMYTIIIHSFCKD 190
A+L + R I G +++ +E + +++ C D
Sbjct: 560 ----------------------ASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGD 597
Query: 191 KLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTF 250
N ++ ++ ++ NA+I + + LKEA L + + PD T
Sbjct: 598 ------INKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITI 651
Query: 251 NILVDALGKEGNVKEAKTVLA-VMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMP 309
++ A G++ +A + ++ K+ +KP + Y ++D E KA + MP
Sbjct: 652 TNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMP 711
Query: 310 QRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKN 347
+ A + S N KT+ VD L E + +N
Sbjct: 712 FKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPEN 749
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 165/365 (45%), Gaps = 18/365 (4%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
DAV I+N + + + ++ M + A L L +G+ D +I++
Sbjct: 541 DAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVV 600
Query: 80 NCYCNQAQITSAFSVLAKI-LKRGYRPDTITFTTLMKGLCLNGQVQTALQ-FHDHVVAQG 137
Y + A SVL + ++ PD F +++ + +Q LQ + + G
Sbjct: 601 RMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLR-IYQKCDLQDKLQHLYYRIRKSG 659
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
+Q Y +IN + ++ P+ + +++ + K KL
Sbjct: 660 IHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVN 719
Query: 198 NLYSEMLARR-VLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYT-----FN 251
L+ +LA+R + DV +YN +I + + K+ T + KN+ D ++ +N
Sbjct: 720 ELF--LLAKRHGVVDVISYNTIIAAY---GKNKDYTNM--SSAIKNMQFDGFSVSLEAYN 772
Query: 252 ILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQR 311
L+DA GK+ +++ +++L M K PD TYN +++ Y +++ D+ + +
Sbjct: 773 TLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKES 832
Query: 312 GIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
G+ P++ SY+ +I V+EA+ L+ EM +NIIPD VTY++L+ L ++ A
Sbjct: 833 GLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEA 892
Query: 372 --WEL 374
W L
Sbjct: 893 IKWSL 897
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 151/346 (43%), Gaps = 12/346 (3%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A +F+RL + P + ++ + +Y A +L G P+ F L LIN
Sbjct: 368 AQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLIN 427
Query: 81 CYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA-----LQFHDHVVA 135
A + + G + +I +++ G++ FH+H+
Sbjct: 428 LQAKYGDRDGAIKTIEDMTGIGCQYSSI-LGIILQAYEKVGKIDVVPCVLKGSFHNHI-- 484
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
RL+Q ++ L+ K G L L+R+ + + + +Y ++I S + ++D
Sbjct: 485 ---RLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTD 541
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
A +Y+ + ++ + +I + ++ + EA KL + + + D F+I+V
Sbjct: 542 AVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVR 601
Query: 256 ALGKEGNVKEAKTVLAVMMKQ-GVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
K G+++EA +VL +M +Q + PD+ + ++ Y +K + ++ + + GI
Sbjct: 602 MYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIH 661
Query: 315 PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLID 360
N Y+ +IN + +DE EM P+TVT++ L+D
Sbjct: 662 WNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLD 707
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 142/338 (42%), Gaps = 38/338 (11%)
Query: 78 LINCYCNQA-QITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
L+ C C ++ Q+T A + ++ + +T++ + G+ A + + ++ +
Sbjct: 528 LLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSS 587
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQL-VKPDVEMYTIIIHSFCKDKLVSD 195
G LD++ + I++ K G A ++ + Q + PDV ++ ++ + K L
Sbjct: 588 GVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDK 647
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
+LY + + + YN +I L E + +EM+ P+ TFN+L+D
Sbjct: 648 LQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLD 707
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNS---------------------------- 287
GK K+ + + + GV D+I+YN+
Sbjct: 708 VYGKAKLFKKVNELFLLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSV 766
Query: 288 -------LMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLL 340
L+D Y ++ K + I M + P+ ++Y+IMIN + +DE ++L
Sbjct: 767 SLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVL 826
Query: 341 AEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
E+ + PD +Y++LI G V A LV ++
Sbjct: 827 KELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEM 864
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 135/291 (46%), Gaps = 18/291 (6%)
Query: 91 AFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILIN 150
A+S++ ++L R R + L+K LC FH+ F+ + +I
Sbjct: 176 AYSLILRVLGR--REEWDRAEDLIKELC---------GFHE------FQKSYQVFNTVIY 218
Query: 151 GLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLP 210
K G + A + + V+P+V +++ + K+ V +A +S M ++
Sbjct: 219 ACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVC 278
Query: 211 DVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVL 270
+ Y+++I + + +A +++D M + + ++++A ++G ++ A+++L
Sbjct: 279 ES-AYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESIL 337
Query: 271 AVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKT 330
M G P+II YN+L+ GY + ++ A+ +F+ + G+ P+ SY MI G +
Sbjct: 338 VSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRA 397
Query: 331 KKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVIFI 381
+EA + E+ P++ +LI+ K G A + ++D+ I
Sbjct: 398 DNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGI 448
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 2/210 (0%)
Query: 67 GISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA 126
G +P+ T +L++ Y +A++ + L + KR D I++ T++ N
Sbjct: 694 GFTPNTVTFNVLLDVY-GKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNM 752
Query: 127 LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS 186
++ GF + Y L++ K Q ++++++ PD Y I+I+
Sbjct: 753 SSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINI 812
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
+ + + + ++ E+ + PD+ +YN LI + I ++EA L+ EM +NI PD
Sbjct: 813 YGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPD 872
Query: 247 AYTFNILVDALGKEGNVKEAKTVLAVMMKQ 276
T+ LV AL + EA ++ MKQ
Sbjct: 873 KVTYTNLVTALRRNDEFLEA-IKWSLWMKQ 901
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/318 (18%), Positives = 144/318 (45%), Gaps = 35/318 (11%)
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
+++N Y Q ++ A S+L + G+ P+ I + TL+ G +++ A +
Sbjct: 319 VMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNI 378
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPD-VEMYTII-IHSFCKD---- 190
G D+ +YR +I G + A ++++ KP+ ++T+I + + D
Sbjct: 379 GLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGA 438
Query: 191 -KLVSDAYNL---YSEMLA-----------RRVLPDVF-------------TYNALIYGF 222
K + D + YS +L V+P V ++++L+ +
Sbjct: 439 IKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAY 498
Query: 223 CIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDI 282
+ + LL E ++ +++ +++L+ + + G + +A + M+ + ++
Sbjct: 499 VKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINL 558
Query: 283 ITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAE 342
++++D Y ++ E ++A+ ++ ++ G+ + +SI++ K ++EA ++L
Sbjct: 559 HITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEI 618
Query: 343 MD-CKNIIPDTVTYSSLI 359
MD K+I+PD + ++
Sbjct: 619 MDEQKDIVPDVYLFRDML 636
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/357 (19%), Positives = 143/357 (40%), Gaps = 13/357 (3%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
FN ++ + K + A H + G+ P++ T+ +L+ Y + A + +
Sbjct: 213 FNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMR 272
Query: 100 KRGYRPDTI--TFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQ 157
K G ++ + T+ L L + + + D + RL + +++N + G+
Sbjct: 273 KFGIVCESAYSSMITIYTRLRLYDKAEEVI---DLMKQDRVRLKLENWLVMLNAYSQQGK 329
Query: 158 TRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNA 217
A ++ ++ P++ Y +I + K + A L+ + + PD +Y +
Sbjct: 330 MELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRS 389
Query: 218 LIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQG 277
+I G+ +EA E+ P+++ L++ K G+ A + M G
Sbjct: 390 MIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIG 449
Query: 278 VKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEAL 337
+ I ++ Y V +++ + I N S+S ++ K VD+ L
Sbjct: 450 CQYSSIL-GIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCL 508
Query: 338 NLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVIFIFNVWMSYAKAIKL 394
LL E ++ ++ Y LI +SG+++ D + I+N M + I L
Sbjct: 509 GLLREKKWRDSAFESHLYHLLICSCKESGQLT-------DAVKIYNHKMESDEEINL 558
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 152/356 (42%), Gaps = 11/356 (3%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+A F R+L P + FN ++ SL + +PD T ILI
Sbjct: 316 EASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CAPDTRTYNILI 374
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ + I A + ++ G +PD +++ TL+ + V+ A +
Sbjct: 375 SLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVE 434
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQ--IQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
+D+ T L + + ++ + G + E Y+ I ++ + +S+A
Sbjct: 435 IDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNM---SSEGYSANIDAYGERGYLSEAE 491
Query: 198 NLY--SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
++ + + +R V YN +I + I ++A +L + M++ + PD T+N LV
Sbjct: 492 RVFICCQEVNKRT---VIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQ 548
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
L + + L M + G D I Y +++ + + ++N A++++ M + I P
Sbjct: 549 ILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEP 608
Query: 316 NVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
+V Y ++IN T V +A++ + M I ++V Y+SLI K G + A
Sbjct: 609 DVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEA 664
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 139/308 (45%), Gaps = 5/308 (1%)
Query: 73 FTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDH 132
+T +I+ Y QI A ++L+ G P T+TF T++ NGQ+
Sbjct: 299 YTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKT 358
Query: 133 VVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKL 192
+ D TY ILI+ K A ++++ +KPD Y ++++F +
Sbjct: 359 MKLH-CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHM 417
Query: 193 VSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEM-VTKNIHPDAYTFN 251
V +A L +EM V D +T +AL + L+++ V N+ + Y+ N
Sbjct: 418 VEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSAN 477
Query: 252 ILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQR 311
I DA G+ G + EA+ V + ++ K +I YN ++ Y + KA ++F SM
Sbjct: 478 I--DAYGERGYLSEAERVF-ICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSY 534
Query: 312 GIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
G+ P+ +Y+ ++ L + L +M + D + Y ++I K G+++ A
Sbjct: 535 GVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMA 594
Query: 372 WELVDDVI 379
E+ +++
Sbjct: 595 EEVYKEMV 602
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 134/278 (48%), Gaps = 10/278 (3%)
Query: 108 ITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMG---QTRAALQL 164
I + ++K ++ + A + + +++ G D+ TY L+ L + R L+
Sbjct: 506 IEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEK 565
Query: 165 MRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCI 224
MR+ G + D Y +I SF K ++ A +Y EM+ + PDV Y LI F
Sbjct: 566 MRET-GYV--SDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFAD 622
Query: 225 VSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVK---PD 281
+++A ++ M I ++ +N L+ K G + EA+ + +++ K PD
Sbjct: 623 TGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPD 682
Query: 282 IITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLA 341
+ T N +++ Y S V KA+ IF+SM QRG A N ++++M+ K + +EA +
Sbjct: 683 VYTSNCMINLYSERSMVRKAEAIFDSMKQRGEA-NEFTFAMMLCMYKKNGRFEEATQIAK 741
Query: 342 EMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+M I+ D ++Y+S++ GR A E +++
Sbjct: 742 QMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMV 779
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 137/315 (43%), Gaps = 4/315 (1%)
Query: 37 IIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLA 96
+IE+N ++ + K A L + G++PD T L+ + L
Sbjct: 505 VIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLE 564
Query: 97 KILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMG 156
K+ + GY D I + ++ GQ+ A + + +V D V Y +LIN G
Sbjct: 565 KMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTG 624
Query: 157 QTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLA---RRVLPDVF 213
+ A+ + ++ + + +Y +I + K + +A +Y ++L + PDV+
Sbjct: 625 NVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVY 684
Query: 214 TYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVM 273
T N +I + S +++A + D M + + +TF +++ K G +EA + M
Sbjct: 685 TSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQM 743
Query: 274 MKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKV 333
+ + D ++YNS++ + L +A + F M GI P+ ++ + L K
Sbjct: 744 REMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMS 803
Query: 334 DEALNLLAEMDCKNI 348
+A+ + E+ K I
Sbjct: 804 KKAVRKIEEIRKKEI 818
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 134/310 (43%), Gaps = 4/310 (1%)
Query: 72 IFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHD 131
+ ++I Y A + ++ G PD T+ TL++ L + +
Sbjct: 505 VIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLE 564
Query: 132 HVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDK 191
+ G+ D + Y +I+ K+GQ A ++ +++ ++PDV +Y ++I++F
Sbjct: 565 KMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTG 624
Query: 192 LVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMV---TKNIHPDAY 248
V A + M + + YN+LI + V L EA + +++ K +PD Y
Sbjct: 625 NVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVY 684
Query: 249 TFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM 308
T N +++ + V++A+ + M ++G + + T+ ++ Y +A I M
Sbjct: 685 TSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQM 743
Query: 309 PQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRV 368
+ I + SY+ ++ + EA+ EM I PD T+ SL L K G
Sbjct: 744 REMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMS 803
Query: 369 SHAWELVDDV 378
A ++++
Sbjct: 804 KKAVRKIEEI 813
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 111/243 (45%), Gaps = 8/243 (3%)
Query: 124 QTALQFHDHVVAQG-FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTI 182
+ A++ + ++G + L+ + Y I++ L K + R L ++ + +KP Y
Sbjct: 168 ERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGT 227
Query: 183 IIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKN 242
+I + K L A +M + PD T ++ + + ++A + +
Sbjct: 228 LIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDE 287
Query: 243 IHPDA------YTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVS 296
D+ YT+N ++D GK G +KEA M+++G+ P +T+N+++ Y
Sbjct: 288 NKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNG 347
Query: 297 EVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYS 356
++ + + +M AP+ +Y+I+I+ K ++ A EM + PD V+Y
Sbjct: 348 QLGEVTSLMKTMKLH-CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYR 406
Query: 357 SLI 359
+L+
Sbjct: 407 TLL 409
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 126/321 (39%), Gaps = 42/321 (13%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
++ + A +F ++ TP +N ++ L ++ TG D
Sbjct: 519 KSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPY 578
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
+I+ + Q+ A V ++++ PD + + L+ G VQ A+ + + +
Sbjct: 579 CAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKE 638
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVK---PDVEMYTIIIHSFCKDKL 192
G + V Y LI K+G A + R++ K PDV +I+ + + +
Sbjct: 639 AGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSM 698
Query: 193 VSDAYNLYSEMLAR----------------------------------RVLPDVFTYNAL 218
V A ++ M R ++L D +YN++
Sbjct: 699 VRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSV 758
Query: 219 IYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEA----KTVLAVMM 274
+ F + + KEA + EMV+ I PD TF L L K G K+A + + +
Sbjct: 759 LGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEI 818
Query: 275 KQGVKPDIITYNSLMD-GYCL 294
K+G++ I T +SL+ G C+
Sbjct: 819 KRGLELWISTLSSLVGIGDCV 839
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 131/321 (40%), Gaps = 37/321 (11%)
Query: 59 LSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLC 118
L HQ + F + I++ Y A + G + +F ++ L
Sbjct: 94 LEHQKTLPQGRREGFIVRIIM-LYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLS 152
Query: 119 LNGQVQTALQF-HDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDV 177
N + T +F HD G +D V++ I I C++G A MR+++ + PDV
Sbjct: 153 FNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDV 212
Query: 178 EMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDE 237
YT +I + K + C++ L +
Sbjct: 213 VTYTTLISALYKHER------------------------------CVI-----GNGLWNL 237
Query: 238 MVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSE 297
MV K P+ TFN+ + L +A +L +M K V+PD ITYN ++ G+ L
Sbjct: 238 MVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARF 297
Query: 298 VNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSS 357
+ A+ ++ +M +G PN+ Y MI+ LCK D A + + K P+ T
Sbjct: 298 PDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEM 357
Query: 358 LIDGLCKSGRVSHAWELVDDV 378
L+ GL K G++ A +++ V
Sbjct: 358 LLKGLVKKGQLDQAKSIMELV 378
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 96/210 (45%)
Query: 67 GISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA 126
GI D + I I +C + A+ + ++ K G PD +T+TTL+ L + +
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 127 LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS 186
+ +V +G + + T+ + I L + A L+ + V+PD Y ++I
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKG 291
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
F + A +Y+ M + P++ Y +I+ C A + + + K +P+
Sbjct: 292 FFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPN 351
Query: 247 AYTFNILVDALGKEGNVKEAKTVLAVMMKQ 276
T +L+ L K+G + +AK+++ ++ ++
Sbjct: 352 LDTVEMLLKGLVKKGQLDQAKSIMELVHRR 381
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 92/208 (44%), Gaps = 1/208 (0%)
Query: 38 IEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAK 97
+ FN + S ++ A +++ +G++PD+ T T LI+ + +
Sbjct: 178 VSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNL 237
Query: 98 ILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQ 157
++ +G +P+ TF ++ L + A + D +TY ++I G
Sbjct: 238 MVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARF 297
Query: 158 TRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNA 217
A ++ + G+ KP++++Y +IH CK AY + + + ++ P++ T
Sbjct: 298 PDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEM 357
Query: 218 LIYGFCIVSQLKEATKLLDEMVTKNIHP 245
L+ G QL +A ++ E+V + + P
Sbjct: 358 LLKGLVKKGQLDQAKSIM-ELVHRRVPP 384
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 86/192 (44%), Gaps = 1/192 (0%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A + + TP ++ + ++++L K + L + + G P++ T +
Sbjct: 194 DGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVR 253
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I N+ + A +L + K PD+IT+ ++KG L A + + + +G+
Sbjct: 254 IQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGY 313
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ + Y+ +I+ LCK G A + + + P+++ +++ K + A +
Sbjct: 314 KPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKS 373
Query: 199 LYSEMLARRVLP 210
+ E++ RRV P
Sbjct: 374 IM-ELVHRRVPP 384
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 124/267 (46%), Gaps = 19/267 (7%)
Query: 94 VLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTY-------- 145
VLAK GY FT L+K V + + V++ +++ + +
Sbjct: 106 VLAKHRSSGYPLTGEIFTYLIK-------VYAEAKLPEKVLSTFYKMLEFNFTPQPKHLN 158
Query: 146 RILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLA 205
RIL + G + A +L + + V P+ Y +++ +FC + +S AY L+ +ML
Sbjct: 159 RILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLE 218
Query: 206 RRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKE 265
R V+PDV +Y LI GFC Q+ A +LLD+M+ K PD L+ L +G E
Sbjct: 219 RDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDE 274
Query: 266 AKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMIN 325
K L M+ +G P N L+ G+C +V +A D+ + + G + ++ ++I
Sbjct: 275 GKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIP 334
Query: 326 GLCKTKKVDEALNLLAEMDCKNIIPDT 352
+C + ++ L + + I DT
Sbjct: 335 LICNEDESEKIKLFLEDAVKEEITGDT 361
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 97/193 (50%), Gaps = 19/193 (9%)
Query: 197 YNLYSEMLARR------VLPDVFTYNALIYGFCIVSQLKEATKLLD---EMVTKNIHPDA 247
+NL ++LA+ + ++FTY +Y ++ K K+L +M+ N P
Sbjct: 100 FNLIDDVLAKHRSSGYPLTGEIFTYLIKVY-----AEAKLPEKVLSTFYKMLEFNFTPQP 154
Query: 248 YTFNILVDAL-GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFN 306
N ++D L G +++A + GV P+ +YN LM +CL +++ A +F
Sbjct: 155 KHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFG 214
Query: 307 SMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
M +R + P+V SY I+I G C+ +V+ A+ LL +M K +PD +LI GLC G
Sbjct: 215 KMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQG 270
Query: 367 RVSHAWELVDDVI 379
+ ++++I
Sbjct: 271 MFDEGKKYLEEMI 283
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 114/267 (42%), Gaps = 46/267 (17%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHY-PTAISLSHQLDFTGISPDIFTLTI 77
+ +S F ++L + TP N+IL LV + Y A L G+ P+ + +
Sbjct: 136 EKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNL 195
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
L+ +C ++ A+ + K+L+R PD ++ L++G C GQV A++ D ++ +G
Sbjct: 196 LMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKG 255
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
F V R LI GLC G + +
Sbjct: 256 F----VPDRTLIGGLCDQG-----------------------------------MFDEGK 276
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKN---IHPDAYTFNILV 254
EM+++ P N L+ GFC +++EA ++ E+V KN +H D T+ +++
Sbjct: 277 KYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVV-EVVMKNGETLHSD--TWEMVI 333
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPD 281
+ E ++ K L +K+ + D
Sbjct: 334 PLICNEDESEKIKLFLEDAVKEEITGD 360
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 9/205 (4%)
Query: 178 EMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQ---LKEATKL 234
E++T +I + + KL + + +ML P N ++ +VS L++A +L
Sbjct: 120 EIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILD--VLVSHRGYLQKAFEL 177
Query: 235 LDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCL 294
+ P+ ++N+L+ A ++ A + M+++ V PD+ +Y L+ G+C
Sbjct: 178 FKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCR 237
Query: 295 VSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVT 354
+VN A ++ + M +G P+ +I GLC DE L EM K P
Sbjct: 238 KGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSV 293
Query: 355 YSSLIDGLCKSGRVSHAWELVDDVI 379
+ L+ G C G+V A ++V+ V+
Sbjct: 294 SNCLVKGFCSFGKVEEACDVVEVVM 318
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 123/255 (48%), Gaps = 16/255 (6%)
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDK-LVS 194
+G++ + Y +I + L+ ++ + V +Y II C K L +
Sbjct: 102 RGYKHNHEAYHTMIKQAITGKRNNFVETLIEEVIAGACEMSVPLYNCIIRFCCGRKFLFN 161
Query: 195 DAYNLYSEML-ARRVLPDVFTY-----------NALIYGFCIVSQLKEATKLLDEMVTKN 242
A+++Y++ML + PD+ TY N L + + ++ TK +M +
Sbjct: 162 RAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTK---QMKSNG 218
Query: 243 IHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAK 302
+ PD + N+++ A K V EA V M G +P+ TY+ L+ G C V +
Sbjct: 219 VIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGL 278
Query: 303 DIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGL 362
+ M +G+ PN Y ++I L +++DEA+ ++ +M ++ PD +TY++++ L
Sbjct: 279 GFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTEL 338
Query: 363 CKSGRVSHAWELVDD 377
C+ GR S A E+V++
Sbjct: 339 CRGGRGSEALEMVEE 353
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 108/252 (42%), Gaps = 52/252 (20%)
Query: 19 DDAVSIFNRLLRMSPTPPIIE------------FNKILTSLVKMKHYPTAI-SLSHQLDF 65
+ A ++N++LR + P +E FNK+ V Y A+ SL+ Q+
Sbjct: 161 NRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYV----YLHAVRSLTKQMKS 216
Query: 66 TGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQT 125
G+ PD F L ++I Y ++ A V ++ G P+ T++ L+KG+C G+V
Sbjct: 217 NGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQ 276
Query: 126 ALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIH 185
L F+ + +G ++ NG C Y ++I
Sbjct: 277 GLGFYKEMQVKG---------MVPNGSC--------------------------YMVLIC 301
Query: 186 SFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHP 245
S ++ + +A + +MLA + PD+ TYN ++ C + EA ++++E ++
Sbjct: 302 SLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVM 361
Query: 246 DAYTFNILVDAL 257
+ L+D +
Sbjct: 362 GERNYRTLMDEV 373
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 80/166 (48%)
Query: 160 AALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
A L +Q++ V PD + +II ++ K V +A ++ EM P+ +TY+ L+
Sbjct: 206 AVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLV 265
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVK 279
G C ++ + EM K + P+ + +L+ +L E + EA V+ M+ +
Sbjct: 266 KGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLS 325
Query: 280 PDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMIN 325
PD++TYN+++ C ++A ++ +R +Y +++
Sbjct: 326 PDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMD 371
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 133/281 (47%), Gaps = 9/281 (3%)
Query: 103 YRPD-TITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR--LDQVTYRILINGLCKMGQTR 159
+ PD T T TT K L + G + F + G R ++ T+RI++ L + +
Sbjct: 104 HHPDFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGLVNDKTFRIVLKTLASARELK 163
Query: 160 AALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
+ + G +VE + + CK+KLV +A ++ + L + PD TY +I
Sbjct: 164 KCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIK-LKEFIKPDEITYRTMI 222
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMM-KQGV 278
GFC V L EA KL + M+ + D +++ L K+ EA V VM+ K+G
Sbjct: 223 QGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGG 282
Query: 279 KPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALN 338
D Y ++D C ++ A+ +F+ M +RG+ + +++ +I GL ++V EA
Sbjct: 283 DLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYG 342
Query: 339 LLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
L+ ++ PD Y LI GL K R S A E+ +I
Sbjct: 343 LVEGVEN----PDISIYHGLIKGLVKIKRASEATEVFRKMI 379
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 132/288 (45%), Gaps = 9/288 (3%)
Query: 41 NKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILK 100
NK+L + ++ L+ ++ G+ D T I++ + ++ + +
Sbjct: 116 NKMLAIIGNSRNMDLFWELAQEIGKRGLVNDK-TFRIVLKTLASARELKKCVNYFHLMNG 174
Query: 101 RGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRA 160
GY + T ++ LC V+ A +F + + + D++TYR +I G C +G
Sbjct: 175 FGYLYNVETMNRGVETLCKEKLVEEA-KFVFIKLKEFIKPDEITYRTMIQGFCDVGDLIE 233
Query: 161 ALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLP-DVFTYNALI 219
A +L + + D+E I+ + K +A ++ M+++R D Y +I
Sbjct: 234 AAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMI 293
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVK 279
C ++ A K+ DEM + ++ D T+ L+ L + + + V A + +GV+
Sbjct: 294 DWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGL-----LVKRRVVEAYGLVEGVE 348
Query: 280 -PDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMING 326
PDI Y+ L+ G + ++A ++F M QRG P +H+Y +++ G
Sbjct: 349 NPDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQG 396
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 151/310 (48%), Gaps = 24/310 (7%)
Query: 54 PTAISLSHQLDFTGISPDIFTLTILINCY--CNQAQITSAFSVLAKILKRGYRPDTITFT 111
P + + ++ G+S DI+ LI+CY C + A + K+ +R DT+++
Sbjct: 134 PVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER----DTVSWN 189
Query: 112 TLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQ 171
+++ GL G+++ A + D + + D +++ +++G + + A +L ++ +
Sbjct: 190 SMLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPER 245
Query: 172 LVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLP--DVFTYNALIYGFCIVSQLK 229
+ ++ ++ + K + A ++ +M LP +V T+ +I G+ LK
Sbjct: 246 ----NTVSWSTMVMGYSKAGDMEMARVMFDKM----PLPAKNVVTWTIIIAGYAEKGLLK 297
Query: 230 EATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLM 289
EA +L+D+MV + DA ++ A + G + + +++ + + + N+L+
Sbjct: 298 EADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALL 357
Query: 290 DGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNII 349
D Y + KA D+FN +P++ + S++ M++GL EA+ L + M + I
Sbjct: 358 DMYAKCGNLKKAFDVFNDIPKKDLV----SWNTMLHGLGVHGHGKEAIELFSRMRREGIR 413
Query: 350 PDTVTYSSLI 359
PD VT+ +++
Sbjct: 414 PDKVTFIAVL 423
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 174/362 (48%), Gaps = 24/362 (6%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
DA+ +F ++ + +N +L LVK A L ++ D+ + ++
Sbjct: 172 DAMKLFEKMSERD----TVSWNSMLGGLVKAGELRDARRLFDEMP----QRDLISWNTML 223
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ Y +++ AF + K+ +R +T++++T++ G G ++ A D +
Sbjct: 224 DGYARCREMSKAFELFEKMPER----NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKN 279
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
+ VT+ I+I G + G + A +L+ Q+ +K D I+ + + L+S +
Sbjct: 280 V--VTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRI 337
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+S + + + + NAL+ + LK+A + +++ K D ++N ++ LG
Sbjct: 338 HSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLGV 393
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQ-RGIAPNVH 318
G+ KEA + + M ++G++PD +T+ +++ +++ D F SM + + P V
Sbjct: 394 HGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVE 453
Query: 319 SYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCK-SGRVSHAWELVDD 377
Y +++ L + ++ EA+ ++ M + P+ V + +L+ G C+ V A E++D+
Sbjct: 454 HYGCLVDLLGRVGRLKEAIKVVQTMPME---PNVVIWGALL-GACRMHNEVDIAKEVLDN 509
Query: 378 VI 379
++
Sbjct: 510 LV 511
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 121/252 (48%), Gaps = 20/252 (7%)
Query: 128 QFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSF 187
Q H ++ + D LI+ L QT A+++ Q+Q +P+V + +I +
Sbjct: 37 QLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQ----EPNVHLCNSLIRAH 92
Query: 188 CKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTK-NIHPD 246
++ A+ ++SEM + D FTY L+ C K++ + K + D
Sbjct: 93 AQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKA-CSGQSWLPVVKMMHNHIEKLGLSSD 151
Query: 247 AYTFNILVDALGKEG--NVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDI 304
Y N L+D + G V++A + M ++ D +++NS++ G E+ A+ +
Sbjct: 152 IYVPNALIDCYSRCGGLGVRDAMKLFEKMSER----DTVSWNSMLGGLVKAGELRDARRL 207
Query: 305 FNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCK 364
F+ MPQR + S++ M++G + +++ +A L +M +N TV++S+++ G K
Sbjct: 208 FDEMPQRDLI----SWNTMLDGYARCREMSKAFELFEKMPERN----TVSWSTMVMGYSK 259
Query: 365 SGRVSHAWELVD 376
+G + A + D
Sbjct: 260 AGDMEMARVMFD 271
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 148/367 (40%), Gaps = 12/367 (3%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
N D I ++ +P N L K A+ L G +P +
Sbjct: 372 NLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYN 431
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
LI+ C + A+ VL + RG+ TF+TL LC G+ A + V+A
Sbjct: 432 YLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMAREL---VIAA 488
Query: 137 GFRLDQVTYRI----LINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKL 192
R D + RI +I+ LC +G+ AL + V +M+T +I+
Sbjct: 489 AER-DLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMR 547
Query: 193 VSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEA--TKLLDEMVTKNIHPDAYTF 250
A L M + P Y +I C + ++ T LL ++ H +
Sbjct: 548 GDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEHK-VQAY 606
Query: 251 NILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQ 310
N+ ++ G G K A+ V +M + G+ P + + ++ Y ++ A F+ + +
Sbjct: 607 NLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLRE 666
Query: 311 RGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSH 370
+G Y +MI GLCK K+D+A++ L EM + + P Y I LC +
Sbjct: 667 QGKTKK-RLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDE 725
Query: 371 AWELVDD 377
A LV++
Sbjct: 726 AVGLVNE 732
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 135/320 (42%), Gaps = 4/320 (1%)
Query: 55 TAISLSH--QLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTT 112
T I+L H + F G+ D F +L+N + S + +I RG+ +T +
Sbjct: 198 TDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFVC-AVTHSI 256
Query: 113 LMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQL 172
L+K C G++ A + ++ IL++ LC + + A +L+ +I+
Sbjct: 257 LVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVG 316
Query: 173 VKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLP-DVFTYNALIYGFCIVSQLKEA 231
Y I I + K +++ + ++ +VF YN++++ + L
Sbjct: 317 TVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGV 376
Query: 232 TKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDG 291
+L EM+ + + P+ T N + K G V EA + + G P ++YN L+
Sbjct: 377 YDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHT 436
Query: 292 YCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPD 351
C V +A D+ RG ++S + N LC K D A L+ ++++P
Sbjct: 437 LCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPK 496
Query: 352 TVTYSSLIDGLCKSGRVSHA 371
+ +I LC G+V A
Sbjct: 497 RIAGCKIISALCDVGKVEDA 516
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 121/270 (44%), Gaps = 4/270 (1%)
Query: 112 TLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQ 171
L+ G + G+ ALQ ++ +G LD Y +L+N L + + + QI +
Sbjct: 187 ALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVR 246
Query: 172 LVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEA 231
V ++I++ FCK + +A + +L L+ C + +EA
Sbjct: 247 GFVCAV-THSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEA 305
Query: 232 TKLLDEM-VTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMK-QGVKPDIITYNSLM 289
TKLLDE+ + ++ D +NI + AL K G + L + +G + ++ YNS++
Sbjct: 306 TKLLDEIKLVGTVNMDR-AYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMV 364
Query: 290 DGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNII 349
+ ++ DI M RG++PN + + + CK VDEAL L
Sbjct: 365 FQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFA 424
Query: 350 PDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
P ++Y+ LI LC + V A++++ I
Sbjct: 425 PTAMSYNYLIHTLCANESVEQAYDVLKGAI 454
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 116/291 (39%), Gaps = 1/291 (0%)
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
L IL++ C++ + A +L +I G + ++ L G + F +
Sbjct: 289 LGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKIS 348
Query: 135 A-QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLV 193
+G L+ Y ++ L K ++ ++ + V P+ + + FCK V
Sbjct: 349 PLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFV 408
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
+A LY P +YN LI+ C +++A +L + + TF+ L
Sbjct: 409 DEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTL 468
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
+AL +G A+ ++ ++ + P I ++ C V +V A I + G+
Sbjct: 469 TNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGV 528
Query: 314 APNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCK 364
+ ++ +I G + D A L+ M K P Y ++I +C+
Sbjct: 529 DTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCE 579
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/325 (17%), Positives = 138/325 (42%), Gaps = 25/325 (7%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P I KI+++L + A+ ++ + +G+ T LI + A +
Sbjct: 495 PKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKL 554
Query: 95 LAKILKRGYRPDTITFTTLMKGLCL--NGQ---VQTALQFH----DHVVAQGFRLDQVTY 145
+ ++ ++GY P + +++ +C +G+ T L+F +H V Y
Sbjct: 555 IIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQ--------AY 606
Query: 146 RILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLA 205
+ I G G+ + A + + + P V +++ S+ K++ ++DA + + ++
Sbjct: 607 NLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLRE 666
Query: 206 RRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKE 265
+ Y +I G C ++L +A L+EM + + P + + + L E E
Sbjct: 667 QGKTKKRL-YQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDE 725
Query: 266 AKTVLAVMMKQGVK-----PDIITYNSLMDGYCLVSEVNKAKDIFNSMPQ-RGIAPNVHS 319
A ++ K G + +++ +N+ M + + ++I + +P+ + + +
Sbjct: 726 AVGLVNEFRKSGRRITAFIGNVLLHNA-MKSKGVYEAWTRMRNIEDKIPEMKSLGELIGL 784
Query: 320 YSIMINGLCKTKKVDEALNLLAEMD 344
+S I+ + K++DE + +D
Sbjct: 785 FSGRIDMEVELKRLDEVIEKCYPLD 809
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 152/354 (42%), Gaps = 30/354 (8%)
Query: 39 EFNKILTSLVKMKHYPTAISLSHQLDFTGISP----------------DIFTLTILINCY 82
E +I SL+K ++ S L F SP + F +I +
Sbjct: 40 ELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGF 99
Query: 83 CNQAQITSAFSVLAKIL--KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRL 140
+ A S+ +L +P +T+ ++ K GQ + Q H V+ +G
Sbjct: 100 SRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLED 159
Query: 141 DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLY 200
D + N + M T L +I ++ DV + +I F K L+ A NL+
Sbjct: 160 DS----FIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLF 215
Query: 201 SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKE 260
EM R + ++N++I GF + K+A + EM K++ PD +T L++A
Sbjct: 216 DEMPQRNGV----SWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYL 271
Query: 261 GNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSY 320
G ++ + + +++ + + I +L+D YC + + ++F P++ ++ +
Sbjct: 272 GASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLS----CW 327
Query: 321 SIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
+ MI GL + A++L +E++ + PD+V++ ++ SG V A E
Sbjct: 328 NSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEF 381
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 159/355 (44%), Gaps = 20/355 (5%)
Query: 21 AVSIFNRLLRMSPT--PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
A+SIF +L SP+ P + + + + ++ L + G+ D F +
Sbjct: 108 AISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTM 167
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
++ Y + A+ + ++ G+ D + + +++ G G + A D + +
Sbjct: 168 LHMYVTCGCLIEAWRIFLGMI--GF--DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR-- 221
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ V++ +I+G + G+ + AL + R++Q + VKPD ++++ C S+
Sbjct: 222 --NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNA-CAYLGASEQGR 278
Query: 199 LYSEMLAR-RVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
E + R R + ALI +C ++E + + K + +N ++ L
Sbjct: 279 WIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLS----CWNSMILGL 334
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQR-GIAPN 316
G + A + + + + G++PD +++ ++ EV++A + F M ++ I P+
Sbjct: 335 ANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPS 394
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
+ Y++M+N L ++EA L+ M + DTV +SSL+ K G V A
Sbjct: 395 IKHYTLMVNVLGGAGLLEEAEALIKNMPVEE---DTVIWSSLLSACRKIGNVEMA 446
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/315 (19%), Positives = 124/315 (39%), Gaps = 27/315 (8%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A ++F+ + P + +N +++ V+ + A+ + ++ + PD FT+ L
Sbjct: 209 DQAQNLFDEM----PQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSL 264
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
+N + I++ + ++I T L+ C G ++ L + +
Sbjct: 265 LNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQL 324
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ +I GL G A+ L +++ ++PD + ++ + V A
Sbjct: 325 S----CWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADE 380
Query: 199 LYSEMLARRVL-PDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
+ M + ++ P + Y ++ L+EA L+ M + D ++ L+ A
Sbjct: 381 FFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNM---PVEEDTVIWSSLLSAC 437
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNS-------MPQ 310
K GNV+ AK + K + PD GY L+S + +F M +
Sbjct: 438 RKIGNVEMAKRAAKCLKK--LDPDETC------GYVLLSNAYASYGLFEEAVEQRLLMKE 489
Query: 311 RGIAPNVHSYSIMIN 325
R + V SI ++
Sbjct: 490 RQMEKEVGCSSIEVD 504
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 136/267 (50%), Gaps = 12/267 (4%)
Query: 120 NGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEM 179
NG+ ++ +++ ++D+ T + + L + Q ++L R +V+ +++
Sbjct: 152 NGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQ----MELARDFFSLMVESGIDV 207
Query: 180 -----YTIIIHSFCKDKLVSDAYNLYSEM-LARRVLPDVFTYNALIYGFCIVS-QLKEAT 232
T+++ C + ++ A L EM L + V ++ T+ ++I G C+ +E
Sbjct: 208 VTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMI-GCCVKRWDFEELD 266
Query: 233 KLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGY 292
+L M +++ D ++ +L+D G V+EA+ ++ +M + ++ + YN +M+GY
Sbjct: 267 LVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGY 326
Query: 293 CLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDT 352
V K ++++ M RG+ PN +Y +++NGLCK KV EA++ L E+ D
Sbjct: 327 SRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDE 386
Query: 353 VTYSSLIDGLCKSGRVSHAWELVDDVI 379
YS+L + + G + + E+V ++I
Sbjct: 387 EMYSTLSEECYRVGMIDKSLEVVAEMI 413
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 118/249 (47%), Gaps = 45/249 (18%)
Query: 72 IFTLTILINCYCNQAQITSAFSVLAKI-LKRGYRPDTITFTTLMKGLCLN----GQVQTA 126
+++LT+++ C +IT A ++ ++ L +G + + +TF +++ G C+ ++
Sbjct: 210 VYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMI-GCCVKRWDFEELDLV 268
Query: 127 LQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS 186
L+ + + LD +Y++LI+G G+ A +L+ + + ++ + +Y +I++
Sbjct: 269 LKLMEK---ESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNG 325
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDE--------- 237
+ + LV LYSEM +R V P+ TY L+ G C ++ EA L+E
Sbjct: 326 YSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEID 385
Query: 238 ---------------MVTKNIH-----------PDAYTFNILVDALGKEGNVKEAKTVLA 271
M+ K++ P A L D+L E N KEA+ ++
Sbjct: 386 EEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLF-EVNRKEAQMLIT 444
Query: 272 VMMKQGVKP 280
+++K G+KP
Sbjct: 445 IVVKCGIKP 453
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 144/336 (42%), Gaps = 54/336 (16%)
Query: 38 IEFN-KILTSLVKMKHYPTAISLSHQL-DFTGISPDIFTLTILINCYCNQAQITSAFSVL 95
IE N +I T + + I + +L D D F +I Y Q +F++
Sbjct: 6 IETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALY 65
Query: 96 AKILKRG-YRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCK 154
+ K + PD TFTTL K L+ V LQ H + GF D +++ K
Sbjct: 66 RDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAK 125
Query: 155 MGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFT 214
G+ + A N + EM R + +
Sbjct: 126 FGK-----------------------------------MGCARNAFDEMPHRSEV----S 146
Query: 215 YNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMM 274
+ ALI G+ +L A+KL D+M D +N ++D K G++ A+ + M
Sbjct: 147 WTALISGYIRCGELDLASKLFDQMPHVK---DVVIYNAMMDGFVKSGDMTSARRLFDEMT 203
Query: 275 KQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVD 334
+ V IT+ +++ GYC + +++ A+ +F++MP+R N+ S++ MI G C+ K+
Sbjct: 204 HKTV----ITWTTMIHGYCNIKDIDAARKLFDAMPER----NLVSWNTMIGGYCQNKQPQ 255
Query: 335 EALNLLAEMDC-KNIIPDTVTYSSLIDGLCKSGRVS 369
E + L EM ++ PD VT S++ + +G +S
Sbjct: 256 EGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALS 291
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 145/321 (45%), Gaps = 32/321 (9%)
Query: 56 AISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMK 115
+ L Q+ G D++ T +++ Y ++ A + ++ R +++T L+
Sbjct: 97 GLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRS----EVSWTALIS 152
Query: 116 GLCLNGQVQTALQFHD---HVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQL 172
G G++ A + D HV D V Y +++G K G +A R++ ++
Sbjct: 153 GYIRCGELDLASKLFDQMPHVK------DVVIYNAMMDGFVKSGDMTSA----RRLFDEM 202
Query: 173 VKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEAT 232
V +T +IH +C K + A L+ M R ++ ++N +I G+C Q +E
Sbjct: 203 THKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLV----SWNTMIGGYCQNKQPQEGI 258
Query: 233 KLLDEM-VTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDG 291
+L EM T ++ PD T ++ A+ G + + + ++ + + +++D
Sbjct: 259 RLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDM 318
Query: 292 YCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPD 351
Y E+ KAK IF+ MP++ +A S++ MI+G AL+L M + PD
Sbjct: 319 YSKCGEIEKAKRIFDEMPEKQVA----SWNAMIHGYALNGNARAALDLFVTMMIEE-KPD 373
Query: 352 TVTYSSLI-----DGLCKSGR 367
+T ++I GL + GR
Sbjct: 374 EITMLAVITACNHGGLVEEGR 394
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 133/312 (42%), Gaps = 17/312 (5%)
Query: 30 RMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQIT 89
+M ++ +N ++ VK +A L ++ + T T +I+ YCN I
Sbjct: 169 QMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEM----THKTVITWTTMIHGYCNIKDID 224
Query: 90 SAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQ-FHDHVVAQGFRLDQVTYRIL 148
+A + + +R + +++ T++ G C N Q Q ++ F + D VT +
Sbjct: 225 AARKLFDAMPER----NLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSV 280
Query: 149 INGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRV 208
+ + G +Q + + V++ T I+ + K + A ++ EM ++V
Sbjct: 281 LPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQV 340
Query: 209 LPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKT 268
++NA+I+G+ + + A L M+ + PD T ++ A G V+E +
Sbjct: 341 A----SWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRK 395
Query: 269 VLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLC 328
VM + G+ I Y ++D + +A+D+ +MP PN S ++
Sbjct: 396 WFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMP---FEPNGIILSSFLSACG 452
Query: 329 KTKKVDEALNLL 340
+ K ++ A +L
Sbjct: 453 QYKDIERAERIL 464
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 79/169 (46%), Gaps = 8/169 (4%)
Query: 211 DVFTYNALIYGFCIVSQLKEATKLLDEMVTKN-IHPDAYTFNILVDALGKEGNVKEAKTV 269
D F N++I + Q ++ L ++ + PD +TF L + V + +
Sbjct: 41 DSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQL 100
Query: 270 LAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCK 329
+ + + G D+ ++D Y ++ A++ F+ MP R S++ +I+G +
Sbjct: 101 HSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEV----SWTALISGYIR 156
Query: 330 TKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
++D A L +M + D V Y++++DG KSG ++ A L D++
Sbjct: 157 CGELDLASKLFDQMP---HVKDVVIYNAMMDGFVKSGDMTSARRLFDEM 202
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 102/203 (50%)
Query: 173 VKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEAT 232
++PD+E Y +I C+ S +Y++ +EM + + P ++ +I GF + E
Sbjct: 178 IEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVR 237
Query: 233 KLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGY 292
K++ M +H T+NI++ L K EAK ++ +M ++P+ +TY+ L+ G+
Sbjct: 238 KVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGF 297
Query: 293 CLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDT 352
C +++A ++F M G P+ Y +I+ LCK + AL L E KN +P
Sbjct: 298 CSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSF 357
Query: 353 VTYSSLIDGLCKSGRVSHAWELV 375
L++GL +V A EL+
Sbjct: 358 SVMKWLVNGLASRSKVDEAKELI 380
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 120/262 (45%), Gaps = 7/262 (2%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQL-DFTGISPDIFTLTI 77
D ++ F L + + N +L + + K Y A + ++ GI PD+ T
Sbjct: 128 DRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNR 187
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLN---GQVQTALQFHDHVV 134
+I C +S++S++A++ ++ +P +F ++ G +V+ ++ D
Sbjct: 188 MIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEF- 246
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
G + TY I+I LCK ++ A L+ + ++P+ Y+++IH FC ++ +
Sbjct: 247 --GVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLD 304
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
+A NL+ M+ PD Y LI+ C + A L E + KN P LV
Sbjct: 305 EAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLV 364
Query: 255 DALGKEGNVKEAKTVLAVMMKQ 276
+ L V EAK ++AV+ ++
Sbjct: 365 NGLASRSKVDEAKELIAVVKEK 386
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 98/205 (47%)
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G D TY +I LC+ G T ++ ++ +++ + +KP + ++I F K++ +
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
+ M V V TYN +I C + EA L+D +++ + P++ T+++L+
Sbjct: 237 RKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHG 296
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
E N+ EA + VM+ G KPD Y +L+ C + A + ++ P+
Sbjct: 297 FCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPS 356
Query: 317 VHSYSIMINGLCKTKKVDEALNLLA 341
++NGL KVDEA L+A
Sbjct: 357 FSVMKWLVNGLASRSKVDEAKELIA 381
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 120/245 (48%), Gaps = 10/245 (4%)
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQ-IQGQLVKPDVEMYTIIIHS---FCKDKLV 193
+ +D++ + + + L + A QL+ IQ Q PD + + + + + + ++
Sbjct: 71 YHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQ---PDPKSESFAVRAIILYGRANML 127
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTK-NIHPDAYTFNI 252
+ + + + V + NAL++ + KEA ++ EM I PD T+N
Sbjct: 128 DRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNR 187
Query: 253 LVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG 312
++ L + G+ + +++A M ++ +KP ++ ++DG+ + ++ + + M + G
Sbjct: 188 MIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFG 247
Query: 313 IAPNVHSYSIMINGLCKTKKVDEALNLL-AEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
+ V +Y+IMI LCK KK EA L+ M C+ + P++VTYS LI G C + A
Sbjct: 248 VHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCR-MRPNSVTYSLLIHGFCSEENLDEA 306
Query: 372 WELVD 376
L +
Sbjct: 307 MNLFE 311
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%)
Query: 102 GYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAA 161
G PD T+ +++ LC +G ++ + + + ++ ++I+G K +
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 162 LQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYG 221
++MR + V V Y I+I CK K ++A L +++ R+ P+ TY+ LI+G
Sbjct: 237 RKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHG 296
Query: 222 FCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPD 281
FC L EA L + MV PD+ + L+ L K G+ + A + M++ P
Sbjct: 297 FCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPS 356
Query: 282 IITYNSLMDGYCLVSEVNKAKDI 304
L++G S+V++AK++
Sbjct: 357 FSVMKWLVNGLASRSKVDEAKEL 379
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 81/187 (43%), Gaps = 6/187 (3%)
Query: 35 PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSV 94
P F ++ K + + + +D G+ + T I+I C C + + A ++
Sbjct: 215 PTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKAL 274
Query: 95 LAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCK 154
+ ++ RP+++T++ L+ G C + A+ + +V G++ D Y LI+ LCK
Sbjct: 275 IDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCK 334
Query: 155 MGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFT 214
G AL L R+ + P + +++ V +A L + V+ + FT
Sbjct: 335 GGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIA------VVKEKFT 388
Query: 215 YNALIYG 221
N ++
Sbjct: 389 RNVDLWN 395
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 158/334 (47%), Gaps = 12/334 (3%)
Query: 27 RLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQA 86
R+ + P ++ +N I+ + Y A+ + ++ T + PD FTL+ ++ +
Sbjct: 197 RVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYV 256
Query: 87 QITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYR 146
+ + ++++G D ++L+ + +++ + + V ++ + D +++
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDS----ERVFSRLYCRDGISWN 312
Query: 147 ILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLAR 206
L+ G + G+ AL+L RQ+ VKP ++ +I + + L+ +L
Sbjct: 313 SLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRG 372
Query: 207 RVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEA 266
++F +AL+ + +K A K+ D M N+ D ++ ++ G+ EA
Sbjct: 373 GFGSNIFIASALVDMYSKCGNIKAARKIFDRM---NV-LDEVSWTAIIMGHALHGHGHEA 428
Query: 267 KTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQ-RGIAPNVHSYSIMIN 325
++ M +QGVKP+ + + +++ V V++A FNSM + G+ + Y+ + +
Sbjct: 429 VSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVAD 488
Query: 326 GLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLI 359
L + K++EA N +++M C + P +S+L+
Sbjct: 489 LLGRAGKLEEAYNFISKM-C--VEPTGSVWSTLL 519
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 137/298 (45%), Gaps = 21/298 (7%)
Query: 69 SPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQ 128
SP + +I C+ +Q+ + A + ++ G PD F +++K + ++
Sbjct: 67 SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGES 126
Query: 129 FHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQL------MRQIQGQLVKPDVEMYTI 182
H +V G D T L+N K+ + + + M Q DV+ T
Sbjct: 127 VHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETC 186
Query: 183 IIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKN 242
I+ D+ E++ R+ DV +YN +I G+ ++A +++ EM T +
Sbjct: 187 IM------PFGIDSVRRVFEVMPRK---DVVSYNTIIAGYAQSGMYEDALRMVREMGTTD 237
Query: 243 IHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAK 302
+ PD++T + ++ + +V + K + ++++G+ D+ +SL+D Y + + ++
Sbjct: 238 LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSE 297
Query: 303 DIFNSMPQR-GIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLI 359
+F+ + R GI S++ ++ G + + +EAL L +M + P V +SS+I
Sbjct: 298 RVFSRLYCRDGI-----SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVI 350
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/281 (19%), Positives = 124/281 (44%), Gaps = 8/281 (2%)
Query: 104 RPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQ 163
R D +++ T++ G +G + AL+ + + D T ++ + +
Sbjct: 204 RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKE 263
Query: 164 LMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFC 223
+ + + + DV + + ++ + K + D+ ++S + R D ++N+L+ G+
Sbjct: 264 IHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCR----DGISWNSLVAGYV 319
Query: 224 IVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDII 283
+ EA +L +MVT + P A F+ ++ A + K + +++ G +I
Sbjct: 320 QNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIF 379
Query: 284 TYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM 343
++L+D Y + A+ IF+ M + V S++ +I G EA++L EM
Sbjct: 380 IASALVDMYSKCGNIKAARKIFDRM---NVLDEV-SWTAIIMGHALHGHGHEAVSLFEEM 435
Query: 344 DCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVIFIFNV 384
+ + P+ V + +++ G V AW + + ++ +
Sbjct: 436 KRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGL 476
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 107/214 (50%), Gaps = 16/214 (7%)
Query: 180 YTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMV 239
Y I I K+ + ++ +++L+ R + + YN++I+ F +L A + MV
Sbjct: 175 YHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMV 234
Query: 240 T-KNIH--PDAYTFNILVDALGKEGN--------VKEAKTVLAVMMKQGVKPDIITYNSL 288
T KN+ P T++IL AL GN ++ +++ M+ G++PD+ N L
Sbjct: 235 TSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCL 294
Query: 289 MDGYCLVSEVNKAKDIFNSMPQ-RGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKN 347
+ GY L VN A IF+ M PN +Y +I+GLC + A LL+EM K
Sbjct: 295 VKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKG 354
Query: 348 IIPDTVTYSSLIDGLCKSGRVSHA----WELVDD 377
+P+ +Y+SL++ SG + A WE++++
Sbjct: 355 FVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIEN 388
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 112/232 (48%), Gaps = 13/232 (5%)
Query: 145 YRILINGLCKMGQTRAALQLMRQI---QGQLVKPDVEMYTIII--------HSFCKDKLV 193
Y +I K G+ A+ + R + + +P + Y I+ +S+ +
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYM 269
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEM-VTKNIHPDAYTFNI 252
+L+ +M+ + PDVF N L+ G+ + + +A ++ +M V + P+++T++
Sbjct: 270 ETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDY 329
Query: 253 LVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG 312
L+ L +G A+ +L+ M +G P+ +YNSL++ + L E++ A M + G
Sbjct: 330 LIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENG 389
Query: 313 IAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCK 364
+ SY +++ C+ K DEA LL + K ++ D +Y L++ L K
Sbjct: 390 RVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLV-DRDSYDKLVNVLHK 440
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 10/200 (5%)
Query: 70 PDIFTLTILI--------NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNG 121
P I T IL N Y N + + S+ +++ G PD L+KG L+
Sbjct: 243 PTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSL 302
Query: 122 QVQTALQ-FHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMY 180
V AL+ FH V + TY LI+GLC G+T A +L+ +++G+ P+ + Y
Sbjct: 303 HVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSY 362
Query: 181 TIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVT 240
++++F + DA EM+ + D +Y L+ C + EAT+LL EM+
Sbjct: 363 NSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLL-EMLR 421
Query: 241 KNIHPDAYTFNILVDALGKE 260
+ D +++ LV+ L K+
Sbjct: 422 EKQLVDRDSYDKLVNVLHKD 441
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 144 TYRILINGLCKMGQT--------RAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSD 195
TY IL L G L RQ+ ++PDV ++ + V+D
Sbjct: 247 TYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVND 306
Query: 196 AYNLYSEM-LARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
A ++ +M + P+ FTY+ LI+G C + A +LL EM K P+ ++N LV
Sbjct: 307 ALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLV 366
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
+A G + +A L M++ G D I+Y +L+D C + ++A + + ++ +
Sbjct: 367 NAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLV 426
Query: 315 PNVHSYSIMINGLCK 329
+ SY ++N L K
Sbjct: 427 -DRDSYDKLVNVLHK 440
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 87/170 (51%), Gaps = 4/170 (2%)
Query: 23 SIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFT-GISPDIFTLTILINC 81
S+F +++ P + N ++ V H A+ + HQ+ P+ FT LI+
Sbjct: 274 SLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHG 333
Query: 82 YCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLD 141
C Q + +A +L+++ +G+ P+ ++ +L+ L+G++ A++ ++ G +D
Sbjct: 334 LCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVD 393
Query: 142 QVTYRILINGLCKMGQTRAALQLMRQI-QGQLVKPDVEMYTIIIHSFCKD 190
++YR L++ C+ G+ A +L+ + + QLV D + Y +++ KD
Sbjct: 394 FISYRTLVDESCRKGKYDEATRLLEMLREKQLV--DRDSYDKLVNVLHKD 441
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 6/168 (3%)
Query: 55 TAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKI-LKRGYRPDTITFTTL 113
T SL Q+ +GI PD+F L L+ Y + A + ++ + P++ T+ L
Sbjct: 271 TVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYL 330
Query: 114 MKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQI--QGQ 171
+ GLC G+ A + + +GF + +Y L+N G+ A++ + ++ G+
Sbjct: 331 IHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGR 390
Query: 172 LVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
+V D Y ++ C+ +A L EML + L D +Y+ L+
Sbjct: 391 VV--DFISYRTLVDESCRKGKYDEATRLL-EMLREKQLVDRDSYDKLV 435
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 159/374 (42%), Gaps = 43/374 (11%)
Query: 33 PTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAF 92
P P I +N I+ + H+ A+ + + +SPD FT L+ + +
Sbjct: 80 PRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGR 139
Query: 93 SVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQ---VTYRILI 149
V A++ + G+ D L+ ++ +A V +G L + V++ ++
Sbjct: 140 FVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSA-----RTVFEGLPLPERTIVSWTAIV 194
Query: 150 NGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFC--------------------- 188
+ + G+ AL++ Q++ VKPD ++++F
Sbjct: 195 SAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLE 254
Query: 189 --KDKLVS--DAYNLYSEMLARRVL------PDVFTYNALIYGFCIVSQLKEATKLLDEM 238
D L+S Y ++ ++L P++ +NA+I G+ +EA + EM
Sbjct: 255 IEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEM 314
Query: 239 VTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEV 298
+ K++ PD + + A + G++++A+++ + + + D+ ++L+D + V
Sbjct: 315 INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSV 374
Query: 299 NKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSL 358
A+ +F+ R + +V +S MI G + EA++L M+ + P+ VT+ L
Sbjct: 375 EGARLVFD----RTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGL 430
Query: 359 IDGLCKSGRVSHAW 372
+ SG V W
Sbjct: 431 LMACNHSGMVREGW 444
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 148/361 (40%), Gaps = 20/361 (5%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTG--ISPDIFTLTI 77
+A+ IF+++ +M P + +L + ++ S+ + G I PD+ L
Sbjct: 205 EALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL--LIS 262
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
L Y Q+ +A + K+ P+ I + ++ G NG + A+ ++ +
Sbjct: 263 LNTMYAKCGQVATAKILFDKMKS----PNLILWNAMISGYAKNGYAREAIDMFHEMINKD 318
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
R D ++ I+ ++G A + + + DV + + +I F K V A
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGAR 378
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
++ L R DV ++A+I G+ + + +EA L M +HP+ TF L+ A
Sbjct: 379 LVFDRTLDR----DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMAC 434
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
G V+E M + P Y ++D +++A ++ MP + P V
Sbjct: 435 NHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMP---VQPGV 491
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDD 377
+ +++ K + V+ L A +I P + + L + R+ W+ V +
Sbjct: 492 TVWGALLSACKKHRHVE--LGEYAAQQLFSIDPSNTGHYVQLSNLYAAARL---WDRVAE 546
Query: 378 V 378
V
Sbjct: 547 V 547
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 117/307 (38%), Gaps = 74/307 (24%)
Query: 139 RLDQVTYRILINGLCKMG----------QTRAALQLMRQIQGQLVKPDVEMYTIIIHSFC 188
+L Q+ R+L+ GL G + + RQ+ L +P + + II +
Sbjct: 36 QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95
Query: 189 KDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAY 248
++ DA +YS M RV PD FT+ L+ +S L+ + ++ D +
Sbjct: 96 RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155
Query: 249 ---------------------------------TFNILVDALGKEGNVKEAKTVLAVMMK 275
++ +V A + G EA + + M K
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215
Query: 276 QGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI---------------------- 313
VKPD + S+++ + + ++ + + I S+ + G+
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275
Query: 314 ---------APNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCK 364
+PN+ ++ MI+G K EA+++ EM K++ PDT++ +S I +
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335
Query: 365 SGRVSHA 371
G + A
Sbjct: 336 VGSLEQA 342
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 129/277 (46%), Gaps = 9/277 (3%)
Query: 108 ITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQ 167
I +T L++ +G + A + + L ++ L+ ++ + + ++ R+
Sbjct: 71 IDYTNLVEKFTRDGNLSGAYDLLQSLQEKNICLPISVFKNLLAAAGELNDMKLSCRVFRE 130
Query: 168 IQGQLVKPDVE-----MYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGF 222
+ L+ P E Y + +F + +L E+ + + N +I+ F
Sbjct: 131 V---LILPGKEPLSSDCYLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAF 187
Query: 223 CIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQ-GVKPD 281
Q+ + +L EM PD T+N ++D LG+ G V E VL+ M + V +
Sbjct: 188 AETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVN 247
Query: 282 IITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLA 341
IITYN++++G + I+N M Q GI P++ SY+ +I+ L ++ V E+L L
Sbjct: 248 IITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFD 307
Query: 342 EMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
EM + I P Y +LID L KSG A +L D++
Sbjct: 308 EMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDEL 344
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 83/182 (45%), Gaps = 1/182 (0%)
Query: 58 SLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGL 117
SL ++ + + + + +I + QI +L ++ + +PD IT+ +++ L
Sbjct: 163 SLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDIL 222
Query: 118 CLNGQVQTALQFHDHVVAQ-GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPD 176
G V L + ++ +TY ++NG+ K + L + ++ ++PD
Sbjct: 223 GRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPD 282
Query: 177 VEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLD 236
+ YT +I S + V ++ L+ EM R++ P V+ Y ALI + A +L D
Sbjct: 283 LLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSD 342
Query: 237 EM 238
E+
Sbjct: 343 EL 344
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 70/155 (45%), Gaps = 1/155 (0%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAIS-LSHQLDFTGISPDIFT 74
R D + I + P +I +N +L L + + LS + +S +I T
Sbjct: 191 RQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIIT 250
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
++N + + ++++ G PD +++T ++ L +G V+ +L+ D +
Sbjct: 251 YNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMK 310
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQ 169
+ R YR LI+ L K G ++ALQL +++
Sbjct: 311 QRQIRPSVYVYRALIDCLKKSGDFQSALQLSDELK 345
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 137/315 (43%), Gaps = 16/315 (5%)
Query: 54 PTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTL 113
P AIS+ + P++ + + + SA + ++ G P++ TF +
Sbjct: 85 PYAISVFKTIQ----EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFV 140
Query: 114 MKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLV 173
+K + + Q H HV+ G LD + LI+ + G+ A ++ + +
Sbjct: 141 LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR-- 198
Query: 174 KPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATK 233
DV YT +I + + +A L+ E+ + DV ++NA+I G+ KEA +
Sbjct: 199 --DVVSYTALIKGYASRGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALE 252
Query: 234 LLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYC 293
L +M+ N+ PD T +V A + G+++ + V + G ++ N+L+D Y
Sbjct: 253 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312
Query: 294 LVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTV 353
E+ A +F +P + +V S++ +I G EAL L EM P+ V
Sbjct: 313 KCGELETACGLFERLPYK----DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDV 368
Query: 354 TYSSLIDGLCKSGRV 368
T S++ G +
Sbjct: 369 TMLSILPACAHLGAI 383
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/399 (20%), Positives = 148/399 (37%), Gaps = 53/399 (13%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+DA +F++ SP ++ + ++ + A L ++ D+ + +
Sbjct: 186 EDAHKVFDK----SPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK----DVVSWNAM 237
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
I+ Y A + ++K RPD T T++ +G ++ Q H + GF
Sbjct: 238 ISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGF 297
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+ LI+ K G+ A L + L DV + +I + L +A
Sbjct: 298 GSNLKIVNALIDLYSKCGELETACGLFER----LPYKDVISWNTLIGGYTHMNLYKEALL 353
Query: 199 LYSEMLAR----------RVLPDVFTYNALIYGFCI-------------VSQLKEATKLL 235
L+ EML +LP A+ G I S L+ T L+
Sbjct: 354 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR--TSLI 411
Query: 236 D------------EMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDII 283
D ++ +H ++N ++ G + + + M K G++PD I
Sbjct: 412 DMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDI 471
Query: 284 TYNSLMDGYCLVSEVNKAKDIFNSMPQR-GIAPNVHSYSIMINGLCKTKKVDEALNLLAE 342
T+ L+ ++ + IF +M Q + P + Y MI+ L + EA ++
Sbjct: 472 TFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINM 531
Query: 343 MDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVIFI 381
M + PD V + SL+ G V +++I I
Sbjct: 532 M---EMEPDGVIWCSLLKACKMHGNVELGESFAENLIKI 567
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 165/362 (45%), Gaps = 29/362 (8%)
Query: 21 AVSIFNRLLRMSPT-PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
A S + RL+ S T P + N + KM + L Q GI PD F+ ++I
Sbjct: 54 APSYYTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVI 113
Query: 80 NCYCNQAQITSAFSVLAKIL--KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
+ F +L + L K G+ D +M + V++A + D + +
Sbjct: 114 -------KSAGRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQR- 165
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
+ ++I+G K G A +L + + DV +T++I F K K + +A
Sbjct: 166 ---KGSDWNVMISGYWKWGNKEEACKLF----DMMPENDVVSWTVMITGFAKVKDLENAR 218
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
+ M + V+ ++NA++ G+ ++A +L ++M+ + P+ T+ I++ A
Sbjct: 219 KYFDRMPEKSVV----SWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISAC 274
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
+ ++++ ++ ++ V+ + +L+D + ++ A+ IFN + G N+
Sbjct: 275 SFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNL 331
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDD 377
+++ MI+G + + A L M +N+ V+++SLI G +G+ + A E +D
Sbjct: 332 VTWNAMISGYTRIGDMSSARQLFDTMPKRNV----VSWNSLIAGYAHNGQAALAIEFFED 387
Query: 378 VI 379
+I
Sbjct: 388 MI 389
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 144/330 (43%), Gaps = 47/330 (14%)
Query: 71 DIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFH 130
D+ + T++I + + +A K R +++ ++ G NG + AL+
Sbjct: 197 DVVSWTVMITGFAKVKDLENA----RKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLF 252
Query: 131 DHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIII--HSFC 188
+ ++ G R ++ T+ I+I+ L++ I + V+ + + T ++ H+ C
Sbjct: 253 NDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKC 312
Query: 189 KDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNI----- 243
+D + A +++E+ +R ++ T+NA+I G+ + + A +L D M +N+
Sbjct: 313 RD--IQSARRIFNELGTQR---NLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNS 367
Query: 244 ---------------------------HPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQ 276
PD T ++ A G +++ ++ + K
Sbjct: 368 LIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKN 427
Query: 277 GVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEA 336
+K + Y SL+ Y + +AK +F+ M +R +V SY+ + E
Sbjct: 428 QIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER----DVVSYNTLFTAFAANGDGVET 483
Query: 337 LNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
LNLL++M + I PD VTY+S++ ++G
Sbjct: 484 LNLLSKMKDEGIEPDRVTYTSVLTACNRAG 513
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 131/295 (44%), Gaps = 20/295 (6%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAI-SLSHQLDFTGISPDIFTLTI 77
+DA+ +FN +LR+ P + I+ S + P+ SL +D + + F T
Sbjct: 246 EDALRLFNDMLRLGVRPNETTW-VIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTA 304
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
L++ + I SA + ++ G + + +T+ ++ G G + +A Q D + +
Sbjct: 305 LLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKR- 360
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQ-IQGQLVKPDVEMYTIIIHSFC---KDKLV 193
+ V++ LI G GQ A++ I KPD E+ I + S C D +
Sbjct: 361 ---NVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPD-EVTMISVLSACGHMADLEL 416
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
D Y + ++ + Y +LI+ + L EA ++ DEM + D ++N L
Sbjct: 417 GDCIVDY--IRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER----DVVSYNTL 470
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM 308
A G+ E +L+ M +G++PD +TY S++ + + + IF S+
Sbjct: 471 FTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSI 525
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 101/226 (44%), Gaps = 27/226 (11%)
Query: 159 RAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNAL 218
RA R I + P+V + + F K + +D LY + ++PD F++ +
Sbjct: 53 RAPSYYTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVV 112
Query: 219 IYGFCIVSQLKEATK---LLDEMVTK-NIHPDAYTFNILVDALGKEGNVKEAKTVL-AVM 273
I K A + L +V K D Y N+++D K +V+ A+ V +
Sbjct: 113 I---------KSAGRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQIS 163
Query: 274 MKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKV 333
++G +N ++ GY +A +F+ MP+ +V S+++MI G K K +
Sbjct: 164 QRKGSD-----WNVMISGYWKWGNKEEACKLFDMMPEN----DVVSWTVMITGFAKVKDL 214
Query: 334 DEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDVI 379
+ A M K++ V++++++ G ++G A L +D++
Sbjct: 215 ENARKYFDRMPEKSV----VSWNAMLSGYAQNGFTEDALRLFNDML 256
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 142/307 (46%), Gaps = 19/307 (6%)
Query: 67 GISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTA 126
G+ F T L++ Y I A V +L R D + + L+ LNG + A
Sbjct: 172 GLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDR----DLVLWNALVSSYVLNGMIDEA 227
Query: 127 LQFHDHVVAQG--FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIII 184
+ + FR D T+ L++ C++ Q + ++ ++ Q D+ + T ++
Sbjct: 228 FGLLKLMGSDKNRFRGDYFTFSSLLSA-CRIEQGKQIHAILFKVSYQF---DIPVATALL 283
Query: 185 HSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIH 244
+ + K +SDA + M+ R V+ ++NA+I GF + +EA +L +M+ +N+
Sbjct: 284 NMYAKSNHLSDARECFESMVVRNVV----SWNAMIVGFAQNGEGREAMRLFGQMLLENLQ 339
Query: 245 PDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDI 304
PD TF ++ + K + E K V A++ K+G + NSL+ Y +++A
Sbjct: 340 PDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLC 399
Query: 305 FNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCK 364
F+S+ + P++ S++ +I L +E+L + M + + PD +T+ ++
Sbjct: 400 FHSIRE----PDLVSWTSVIGALASHGFAEESLQMFESM-LQKLQPDKITFLEVLSACSH 454
Query: 365 SGRVSHA 371
G V
Sbjct: 455 GGLVQEG 461
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 153/342 (44%), Gaps = 63/342 (18%)
Query: 41 NKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITS-----AFSVL 95
NK+L + K++ + A L ++ +I T ILI+ + T+ F L
Sbjct: 75 NKLLQAYTKIREFDDADKLFDEMPLR----NIVTWNILIHGVIQRDGDTNHRAHLGFCYL 130
Query: 96 AKILKRGYRPDTITFTTLMKGLCLNG-QVQTALQFHDHVVAQGFRLDQVTYRILINGLCK 154
++IL D ++F L++ LC + ++ +Q H +V QG L+ +
Sbjct: 131 SRILFTDVSLDHVSFMGLIR-LCTDSTNMKAGIQLHCLMVKQG--LESSCF--------- 178
Query: 155 MGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFT 214
P T ++H + K L+ +A ++ +L R D+
Sbjct: 179 --------------------PS----TSLVHFYGKCGLIVEARRVFEAVLDR----DLVL 210
Query: 215 YNALIYGFCIVSQLKEATKLLDEMVT-KN-IHPDAYTFNILVDALGKEGNVKEAKTVLAV 272
+NAL+ + + + EA LL M + KN D +TF+ L+ A +++ K + A+
Sbjct: 211 WNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAI 266
Query: 273 MMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKK 332
+ K + DI +L++ Y + ++ A++ F SM R NV S++ MI G + +
Sbjct: 267 LFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVR----NVVSWNAMIVGFAQNGE 322
Query: 333 VDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
EA+ L +M +N+ PD +T++S++ K S WE+
Sbjct: 323 GREAMRLFGQMLLENLQPDELTFASVLSSCAK---FSAIWEI 361
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/306 (19%), Positives = 134/306 (43%), Gaps = 22/306 (7%)
Query: 71 DIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFH 130
DI T L+N Y ++ A ++ R + +++ ++ G NG+ + A++
Sbjct: 275 DIPVATALLNMYAKSNHLSDARECFESMVVR----NVVSWNAMIVGFAQNGEGREAMRLF 330
Query: 131 DHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPD----VEMYTIIIHS 186
++ + + D++T+ +++ K +A+ ++Q+Q + K + + +I S
Sbjct: 331 GQMLLENLQPDELTFASVLSSCAKF----SAIWEIKQVQAMVTKKGSADFLSVANSLISS 386
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
+ ++ +S+A + + PD+ ++ ++I +E+ ++ + M+ K + PD
Sbjct: 387 YSRNGNLSEALLCFHSIRE----PDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPD 441
Query: 247 AYTFNILVDALGKEGNVKEAKTVLAVMMK-QGVKPDIITYNSLMDGYCLVSEVNKAKDIF 305
TF ++ A G V+E M + ++ + Y L+D +++A D+
Sbjct: 442 KITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVL 501
Query: 306 NSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKS 365
NSMP P+ H+ + G C + E++ A+ + V YS L +
Sbjct: 502 NSMPTE---PSTHALAAFTGG-CNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSE 557
Query: 366 GRVSHA 371
G + A
Sbjct: 558 GHWNQA 563
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 131/291 (45%), Gaps = 17/291 (5%)
Query: 87 QITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYR 146
Q S SV ++ PD TF L+ + + H ++ G D
Sbjct: 42 QRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRT 101
Query: 147 ILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLAR 206
L+N G R+A ++ + D+ + +++++ K L+ DA L+ EM R
Sbjct: 102 SLLNMYSSCGDLRSAQRVFDDSGSK----DLPAWNSVVNAYAKAGLIDDARKLFDEMPER 157
Query: 207 RVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKN-----IHPDAYTFNILVDALGKEG 261
+V +++ LI G+ + + KEA L EM + P+ +T + ++ A G+ G
Sbjct: 158 ----NVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLG 213
Query: 262 NVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYS 321
+++ K V A + K V+ DI+ +L+D Y + +AK +FN++ G +V +YS
Sbjct: 214 ALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL---GSKKDVKAYS 270
Query: 322 IMINGLCKTKKVDEALNLLAEMDCK-NIIPDTVTYSSLIDGLCKSGRVSHA 371
MI L DE L +EM NI P++VT+ ++ G ++
Sbjct: 271 AMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEG 321
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 161/391 (41%), Gaps = 63/391 (16%)
Query: 22 VSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINC 81
+S++ R+ +P F +L S H P Q+ G+ D F T L+N
Sbjct: 47 ISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNM 106
Query: 82 YCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLD 141
Y + + SA ++ D + +++ G + A + D + + +
Sbjct: 107 YSSCGDLRSA----QRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPER----N 158
Query: 142 QVTYRILINGLCKMGQTRAALQLMRQIQ-----------------------GQL------ 172
+++ LING G+ + AL L R++Q G+L
Sbjct: 159 VISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQG 218
Query: 173 -----------VKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYG 221
V+ D+ + T +I + K + A +++ + +++ DV Y+A+I
Sbjct: 219 KWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKK---DVKAYSAMICC 275
Query: 222 FCIVSQLKEATKLLDEMVTK-NIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQ-GVK 279
+ E +L EM T NI+P++ TF ++ A G + E K+ +M+++ G+
Sbjct: 276 LAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGIT 335
Query: 280 PDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMING---LCKTKKVDEA 336
P I Y ++D Y + +A+ SMP + P+V + +++G L K + A
Sbjct: 336 PSIQHYGCMVDLYGRSGLIKEAESFIASMP---MEPDVLIWGSLLSGSRMLGDIKTCEGA 392
Query: 337 LNLLAEMDCKNIIPDTVTYSSLIDGLCKSGR 367
L L E+D N + Y L + K+GR
Sbjct: 393 LKRLIELDPMN----SGAYVLLSNVYAKTGR 419
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 138/315 (43%), Gaps = 15/315 (4%)
Query: 73 FTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDH 132
F T +I Y + + A ++ + K P + TF+ L+K + QFH
Sbjct: 115 FLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFH-- 172
Query: 133 VVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKL 192
AQ FRL + + N + M ++ R++ ++ + DV +T +I ++ +
Sbjct: 173 --AQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGN 230
Query: 193 VSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNI 252
+ A L+ + + D+ + A++ GF ++ +EA + D M I D T
Sbjct: 231 MECAAELFESLPTK----DMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAG 286
Query: 253 LVDALGKEGNVKEAKTVLAVMMKQGVKPD--IITYNSLMDGYCLVSEVNKAKDIFNSMPQ 310
+ A + G K A + + K G P ++ ++L+D Y V +A ++F SM
Sbjct: 287 YISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNN 346
Query: 311 RGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCK-NIIPDTVTYSSLIDGLCKSGRVS 369
+ NV +YS MI GL + EAL+L M + I P+TVT+ + SG V
Sbjct: 347 K----NVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVD 402
Query: 370 HAWELVDDVIFIFNV 384
++ D + F V
Sbjct: 403 QGRQVFDSMYQTFGV 417
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 140/321 (43%), Gaps = 59/321 (18%)
Query: 71 DIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFH 130
D+ + T LI Y + A + + + D + +T ++ G N + Q AL++
Sbjct: 214 DVISWTELIAAYARVGNMECAAELFESLPTK----DMVAWTAMVTGFAQNAKPQEALEYF 269
Query: 131 DHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPD--VEMYTIIIHSFC 188
D + G R D+VT I+ ++G ++ A + ++ Q P V + + +I +
Sbjct: 270 DRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYS 329
Query: 189 KDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTK-NIHPDA 247
K V +A N++ M + +VFTY+++I G + +EA L MVT+ I P+
Sbjct: 330 KCGNVEEAVNVFMSMNNK----NVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNT 385
Query: 248 YTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNS 307
TF V A+M +++ L+D + + +F+S
Sbjct: 386 VTF------------------VGALMA--------CSHSGLVD---------QGRQVFDS 410
Query: 308 MPQR-GIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
M Q G+ P Y+ M++ L +T ++ EAL L+ M ++ P + +L+ G C+
Sbjct: 411 MYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTM---SVEPHGGVWGALL-GACRIH 466
Query: 367 R--------VSHAWELVDDVI 379
H +EL D+I
Sbjct: 467 NNPEIAEIAAEHLFELEPDII 487
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 162/366 (44%), Gaps = 27/366 (7%)
Query: 15 IRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFT 74
+ + D A+ F R+ P + F +L + L +G S D+F
Sbjct: 113 VSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFA 172
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
+T L N Y Q+ A V ++ +R D +++ T++ G NG + AL+ +
Sbjct: 173 MTGLENMYAKCRQVNEARKVFDRMPER----DLVSWNTIVAGYSQNGMARMALEMVKSMC 228
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLM---RQIQGQLVKPD----VEMYTIIIHSF 187
+ + +T ++ + +AL+L+ ++I G ++ V + T ++ +
Sbjct: 229 EENLKPSFITIVSVLPAV-------SALRLISVGKEIHGYAMRSGFDSLVNISTALVDMY 281
Query: 188 CKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDA 247
K + A L+ ML R +V ++N++I + KEA + +M+ + + P
Sbjct: 282 AKCGSLETARQLFDGMLER----NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTD 337
Query: 248 YTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNS 307
+ + A G+++ + + + ++ G+ ++ NSL+ YC EV+ A +F
Sbjct: 338 VSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGK 397
Query: 308 MPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGR 367
+ R + S++ MI G + + +ALN ++M + + PDT TY S+I + +
Sbjct: 398 LQSRTLV----SWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSI 453
Query: 368 VSHA-W 372
HA W
Sbjct: 454 THHAKW 459
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/383 (19%), Positives = 165/383 (43%), Gaps = 29/383 (7%)
Query: 2 SSFLRLKNSLPPSIRNA--------DDAVSIFNRLLRMSPTPPIIE---------FNKIL 44
SS L+ LP +N VS+F R + + E ++ +L
Sbjct: 48 SSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTML 107
Query: 45 TSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYR 104
K+ A+ ++ + + P ++ T L+ ++A++ + ++K G+
Sbjct: 108 KGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFS 167
Query: 105 PDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQL 164
D T L QV A + D + + D V++ ++ G + G R AL++
Sbjct: 168 LDLFAMTGLENMYAKCRQVNEARKVFDRMPER----DLVSWNTIVAGYSQNGMARMALEM 223
Query: 165 MRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCI 224
++ + + +KP ++ + +L+S ++ + V AL+ +
Sbjct: 224 VKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAK 283
Query: 225 VSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIIT 284
L+ A +L D M+ +N+ ++N ++DA + N KEA + M+ +GVKP ++
Sbjct: 284 CGSLETARQLFDGMLERNV----VSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 339
Query: 285 YNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMD 344
+ + ++ + + I + G+ NV + +I+ CK K+VD A ++ ++
Sbjct: 340 VMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ 399
Query: 345 CKNIIPDTVTYSSLIDGLCKSGR 367
+ + V+++++I G ++GR
Sbjct: 400 SRTL----VSWNAMILGFAQNGR 418
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/389 (19%), Positives = 162/389 (41%), Gaps = 51/389 (13%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
R ++A +F+R+ P ++ +N I+ + A+ + + + P T+
Sbjct: 184 RQVNEARKVFDRM----PERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITI 239
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
++ I+ + ++ G+ T L+ G ++TA Q D ++
Sbjct: 240 VSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLE 299
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKP-------------------- 175
+ + V++ +I+ + + A+ + +++ + VKP
Sbjct: 300 R----NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLER 355
Query: 176 ---------------DVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIY 220
+V + +I +CK K V A +++ ++ +R ++ ++NA+I
Sbjct: 356 GRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLV----SWNAMIL 411
Query: 221 GFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKP 280
GF + +A +M ++ + PD +T+ ++ A+ + AK + V+M+ +
Sbjct: 412 GFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDK 471
Query: 281 DIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLL 340
++ +L+D Y + A+ IF+ M +R +V +++ MI+G AL L
Sbjct: 472 NVFVTTALVDMYAKCGAIMIARLIFDMMSER----HVTTWNAMIDGYGTHGFGKAALELF 527
Query: 341 AEMDCKNIIPDTVTYSSLIDGLCKSGRVS 369
EM I P+ VT+ S+I SG V
Sbjct: 528 EEMQKGTIKPNGVTFLSVISACSHSGLVE 556
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 156/370 (42%), Gaps = 29/370 (7%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFT-GISPDIFT 74
N +A+ IF ++L P + L + + H+L G+ ++
Sbjct: 316 ENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG-RFIHKLSVELGLDRNVSV 374
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
+ LI+ YC ++ +A S+ K+ R +++ ++ G NG+ AL + +
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQSR----TLVSWNAMILGFAQNGRPIDALNYFSQMR 430
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVS 194
++ + D TY +I + ++ T A + + + +V + T ++ + K +
Sbjct: 431 SRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIM 490
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
A ++ M R V T+NA+I G+ K A +L +EM I P+ TF ++
Sbjct: 491 IARLIFDMMSERHVT----TWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVI 546
Query: 255 DALGKEGNVKEAKTVLAVMMKQ--GVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG 312
A G V EA MMK+ ++ + Y +++D +N+A D MP
Sbjct: 547 SACSHSGLV-EAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMP--- 602
Query: 313 IAPNVHSYSIMINGLCKTKK----VDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRV 368
+ P V+ Y M+ G C+ K ++A L E++ PD Y L+ + R
Sbjct: 603 VKPAVNVYGAML-GACQIHKNVNFAEKAAERLFELN-----PDDGGYHVLLANIY---RA 653
Query: 369 SHAWELVDDV 378
+ WE V V
Sbjct: 654 ASMWEKVGQV 663
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 106/231 (45%), Gaps = 21/231 (9%)
Query: 181 TIIIHSFCKDKLVSDAYNLYSEMLAR-RVLPDVFTYNALIYGFCIVSQLKEATKLLDEMV 239
T ++ FC+ V +A ++ + ++ VL Y+ ++ GF VS L +A + M
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVL-----YHTMLKGFAKVSDLDKALQFFVRMR 127
Query: 240 TKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVN 299
++ P Y F L+ G E ++ K + +++K G D+ L + Y +VN
Sbjct: 128 YDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVN 187
Query: 300 KAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLI 359
+A+ +F+ MP+R + S++ ++ G + AL ++ M +N+ P +T S++
Sbjct: 188 EARKVFDRMPERDLV----SWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVL 243
Query: 360 DG-----LCKSGRVSHAWELVDDVIFIFNVWMS----YAK--AIKLTRQLL 399
L G+ H + + + N+ + YAK +++ RQL
Sbjct: 244 PAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLF 294
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 143/313 (45%), Gaps = 14/313 (4%)
Query: 68 ISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTAL 127
I+ I L IL + C ++ AF +L ++ +PD + + + + + G +
Sbjct: 220 INGSIIALLIL-HSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNL---- 274
Query: 128 QFHDHVVAQGFRLDQVT-----YRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTI 182
+ VV + R V YR I L + A ++ I D ++
Sbjct: 275 -YERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDA 333
Query: 183 IIHSFCK-DKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTK 241
+I S D + + +Y M++ LP + T + L C + K + + +K
Sbjct: 334 LIGSVSAVDPDSAVEFLVY--MVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSK 391
Query: 242 NIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKA 301
+ ++++++ L K G V+E+ T L M K+G+ PD+ YN+L++ C + A
Sbjct: 392 GYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPA 451
Query: 302 KDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDG 361
K +++ M G N+ +Y+++I L + + +E+L L +M + I PD Y SLI+G
Sbjct: 452 KKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEG 511
Query: 362 LCKSGRVSHAWEL 374
LCK ++ A E+
Sbjct: 512 LCKETKIEAAMEV 524
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 109/223 (48%), Gaps = 5/223 (2%)
Query: 125 TALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIII 184
+A++F ++V+ G T L LC+ ++ ++ + + +++ Y+++I
Sbjct: 345 SAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMI 404
Query: 185 HSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIH 244
CK V ++Y EM + PDV YNALI C ++ A KL DEM +
Sbjct: 405 SFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCK 464
Query: 245 PDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDI 304
+ T+N+L+ L +EG +E+ + M+++G++PD Y SL++G C +++ A ++
Sbjct: 465 MNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEV 524
Query: 305 FNSMPQRG---IAPNVHSYSIMINGLCKTKKVDEALNLLAEMD 344
F +R + V S ++ LC EA LL E +
Sbjct: 525 FRKCMERDHKTVTRRVLSEFVL--NLCSNGHSGEASQLLRERE 565
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 99/190 (52%)
Query: 90 SAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILI 149
SA L ++ G P T + L K LC + + ++ ++ + ++G+ + +Y ++I
Sbjct: 345 SAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMI 404
Query: 150 NGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVL 209
+ LCK G+ R + +++++ + + PDV +Y +I + CK +++ A L+ EM
Sbjct: 405 SFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCK 464
Query: 210 PDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTV 269
++ TYN LI + +E+ +L D+M+ + I PD + L++ L KE ++ A V
Sbjct: 465 MNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEV 524
Query: 270 LAVMMKQGVK 279
M++ K
Sbjct: 525 FRKCMERDHK 534
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 145/376 (38%), Gaps = 35/376 (9%)
Query: 38 IEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAK 97
I ++ I SL + + +L Q+ I D LI+ + SAF VL +
Sbjct: 83 ISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEE 142
Query: 98 ILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQ 157
G L+ GL +G A + + +G L+ + + + I C+ +
Sbjct: 143 AFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSE 202
Query: 158 TRAALQLMRQIQGQLVKPDVEMYTIII-HSFCKDKLVSDAYNLYSEMLARRVLPDVFTYN 216
T L+L+ +++ + + + ++I HS CK DA+ + E+ PD Y
Sbjct: 203 TNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYR 262
Query: 217 ALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTV------- 269
+ F + L E +L + + P + + + L + EAK V
Sbjct: 263 VIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSG 322
Query: 270 ---------------------------LAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAK 302
L M+ G P I T + L C + +
Sbjct: 323 KFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLI 382
Query: 303 DIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGL 362
+ + +G + SYS+MI+ LCK +V E+ L EM + + PD Y++LI+
Sbjct: 383 KAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEAC 442
Query: 363 CKSGRVSHAWELVDDV 378
CK+ + A +L D++
Sbjct: 443 CKAEMIRPAKKLWDEM 458
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 101/228 (44%), Gaps = 13/228 (5%)
Query: 17 NADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
+ D AV ++ P I +K+ +L + I L G ++ + +
Sbjct: 342 DPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYS 401
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
++I+ C ++ +++ L ++ K G PD + L++ C ++ A + D + +
Sbjct: 402 LMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVE 461
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G +++ TY +LI L + G+ +L+L ++ + ++PD +Y +I CK+ + A
Sbjct: 462 GCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAA 521
Query: 197 YNLYSEML-------ARRVLPDVFTYNALIYGFCIVSQLKEATKLLDE 237
++ + + RRVL + + C EA++LL E
Sbjct: 522 MEVFRKCMERDHKTVTRRVLSE------FVLNLCSNGHSGEASQLLRE 563
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 102/238 (42%), Gaps = 5/238 (2%)
Query: 102 GYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAA 161
GY D+I++ ++ K L L+ Q V + LD YR LI+ L + ++A
Sbjct: 77 GYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSA 136
Query: 162 LQLMRQI--QGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
++ + GQ + PDV ++ D A L+ +M + V + + I
Sbjct: 137 FWVLEEAFSTGQEIHPDV--CNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYI 194
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV-DALGKEGNVKEAKTVLAVMMKQGV 278
FC S+ + +L+DE+ N++ + +L+ +L K +A +L +
Sbjct: 195 GWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDC 254
Query: 279 KPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEA 336
KPD + Y + + + + + + + + + G+AP Y I L K++ EA
Sbjct: 255 KPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEA 312
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 145/323 (44%), Gaps = 23/323 (7%)
Query: 71 DIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFH 130
D + +INCY ++ ++ AF +L ++ G +T+ T+ G G AL
Sbjct: 249 DAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCV 308
Query: 131 DHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKP--------DVEMYTI 182
+ R+ V +INGL K AL+ + +++ +V I
Sbjct: 309 VGMRNCNVRIGSVA---MINGL-KACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLI 364
Query: 183 IIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKN 242
++S C D + A+ ++ ++ A + T+N++I GF + +E + LL EM+
Sbjct: 365 TMYSRCSD--LRHAFIVFQQVEAN----SLSTWNSIISGFAYNERSEETSFLLKEMLLSG 418
Query: 243 IHPDAYTFNILVDALGKEGNVKEAKTVLA-VMMKQGVKPDIITYNSLMDGYCLVSEVNKA 301
HP+ T ++ + GN++ K ++ +Q K +I +NSL+D Y E+ A
Sbjct: 419 FHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAA 478
Query: 302 KDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDG 361
K +F+SM +R +Y+ +I+G + K + AL +MD I PD VT +++
Sbjct: 479 KRVFDSMRKRDKV----TYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSA 534
Query: 362 LCKSGRVSHAWELVDDVIFIFNV 384
S V L + +F +
Sbjct: 535 CSHSNLVREGHWLFTKMEHVFGI 557
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 99/234 (42%), Gaps = 10/234 (4%)
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
LI Y + + AF V ++ T+ +++ G N + + ++ G
Sbjct: 363 LITMYSRCSDLRHAFIVFQQVEANSLS----TWNSIISGFAYNERSEETSFLLKEMLLSG 418
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQI-QGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
F + +T ++ ++G + + I + Q K + ++ ++ + K + A
Sbjct: 419 FHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAA 478
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
++ M R D TY +LI G+ + + + A +M I PD T ++ A
Sbjct: 479 KRVFDSMRKR----DKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSA 534
Query: 257 LGKEGNVKEAKTVLAVMMKQ-GVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMP 309
V+E + M G++ + Y+ ++D YC ++KA+DIF+++P
Sbjct: 535 CSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIP 588
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 145/323 (44%), Gaps = 23/323 (7%)
Query: 71 DIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFH 130
D + +INCY ++ ++ AF +L ++ G +T+ T+ G G AL
Sbjct: 249 DAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCV 308
Query: 131 DHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKP--------DVEMYTI 182
+ R+ V +INGL K AL+ + +++ +V I
Sbjct: 309 VGMRNCNVRIGSVA---MINGL-KACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLI 364
Query: 183 IIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKN 242
++S C D + A+ ++ ++ A + T+N++I GF + +E + LL EM+
Sbjct: 365 TMYSRCSD--LRHAFIVFQQVEAN----SLSTWNSIISGFAYNERSEETSFLLKEMLLSG 418
Query: 243 IHPDAYTFNILVDALGKEGNVKEAKTVLA-VMMKQGVKPDIITYNSLMDGYCLVSEVNKA 301
HP+ T ++ + GN++ K ++ +Q K +I +NSL+D Y E+ A
Sbjct: 419 FHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAA 478
Query: 302 KDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDG 361
K +F+SM +R +Y+ +I+G + K + AL +MD I PD VT +++
Sbjct: 479 KRVFDSMRKRDKV----TYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSA 534
Query: 362 LCKSGRVSHAWELVDDVIFIFNV 384
S V L + +F +
Sbjct: 535 CSHSNLVREGHWLFTKMEHVFGI 557
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 99/234 (42%), Gaps = 10/234 (4%)
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
LI Y + + AF V ++ T+ +++ G N + + ++ G
Sbjct: 363 LITMYSRCSDLRHAFIVFQQVEANSLS----TWNSIISGFAYNERSEETSFLLKEMLLSG 418
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQI-QGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
F + +T ++ ++G + + I + Q K + ++ ++ + K + A
Sbjct: 419 FHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAA 478
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
++ M R D TY +LI G+ + + + A +M I PD T ++ A
Sbjct: 479 KRVFDSMRKR----DKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSA 534
Query: 257 LGKEGNVKEAKTVLAVMMKQ-GVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMP 309
V+E + M G++ + Y+ ++D YC ++KA+DIF+++P
Sbjct: 535 CSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIP 588
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 134/301 (44%), Gaps = 12/301 (3%)
Query: 71 DIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFH 130
D+ T +I YC + AF + ++ PD + ++ G ++ +
Sbjct: 176 DVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIY 235
Query: 131 DHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKD 190
+ ++ R+D L+ L M + + R+ ++ ++ + T ++ + K
Sbjct: 236 EFLIENDVRMDTH----LLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKC 291
Query: 191 KLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTF 250
+ DA ++ + + D+ + +I + +EA ++ +EM I PD +
Sbjct: 292 GRLDDAQVIFDQTEKK----DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSM 347
Query: 251 NILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQ 310
++ A G + +AK V + + G++ ++ N+L++ Y ++ +D+F MP+
Sbjct: 348 FSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPR 407
Query: 311 RGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSH 370
R NV S+S MIN L + +AL+L A M +N+ P+ VT+ ++ G SG V
Sbjct: 408 R----NVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEE 463
Query: 371 A 371
Sbjct: 464 G 464
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 125/295 (42%), Gaps = 43/295 (14%)
Query: 105 PDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQL 164
P++I F ++ L + + + + F+ + G RLDQ ++ ++ + K+ ++L
Sbjct: 74 PESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMEL 133
Query: 165 MRQIQ--GQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGF 222
L P VE + +++ C ++ A N++ EM R DV T+N +I +
Sbjct: 134 HGVAFKIATLCDPFVETGFMDMYASCGR--INYARNVFDEMSHR----DVVTWNTMIERY 187
Query: 223 CIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDI 282
C + EA KL +EM N+ PD +V A G+ GN++ + + +++ V+ D
Sbjct: 188 CRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDT 247
Query: 283 ITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVD-------- 334
+L+ Y ++ A++ F M R N+ + M++G K ++D
Sbjct: 248 HLLTALVTMYAGAGCMDMAREFFRKMSVR----NLFVSTAMVSGYSKCGRLDDAQVIFDQ 303
Query: 335 -----------------------EALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
EAL + EM C I PD V+ S+I G
Sbjct: 304 TEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLG 358
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 118/286 (41%), Gaps = 17/286 (5%)
Query: 71 DIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFH 130
D+ T +I+ Y A V ++ G +PD ++ +++ G + A H
Sbjct: 308 DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVH 367
Query: 131 DHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKD 190
+ G + LIN K G L R + ++ + +V ++ +I++
Sbjct: 368 SCIHVNGLESELSINNALINMYAKCG----GLDATRDVFEKMPRRNVVSWSSMINALSMH 423
Query: 191 KLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTK-NIHPDAYT 249
SDA +L++ M V P+ T+ ++YG ++E K+ M + NI P
Sbjct: 424 GEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEH 483
Query: 250 FNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVN----KAKDIF 305
+ +VD G+ ++EA L V+ V +++ + SLM + E+ AK I
Sbjct: 484 YGCMVDLFGRANLLREA---LEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRIL 540
Query: 306 NSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPD 351
P A +M N + ++ ++ N+ M+ KN+ +
Sbjct: 541 ELEPDHDGA-----LVLMSNIYAREQRWEDVRNIRRVMEEKNVFKE 581
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 161/361 (44%), Gaps = 7/361 (1%)
Query: 19 DDAVSIFNRLLR--MSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLT 76
+ A+ +F LLR + P + + K++ L K K A L ++ G + T
Sbjct: 131 ESAIQVFE-LLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYT 189
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGY--RPDTITFTTLMKGLCLNGQVQTALQFHDHVV 134
L++ Y + +AF++L + +K + +PD T++ L+K +
Sbjct: 190 ALVSAYSRSGRFDAAFTLLER-MKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMR 248
Query: 135 AQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQL-VKPDVEMYTIIIHSFCKDKLV 193
QG R + +TY LI+ K + Q+ G+ KPD + +F + +
Sbjct: 249 RQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQI 308
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
N Y + + + P++ T+N L+ + K+ + +++ M + T+N++
Sbjct: 309 EMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVV 368
Query: 254 VDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGI 313
+DA G+ G++K+ + + +M + + P +T SL+ Y S+ +K + + I
Sbjct: 369 IDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDI 428
Query: 314 APNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWE 373
++ ++ +++ + +K E +L M+ K PD +TY +++ SG +H E
Sbjct: 429 RLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKE 488
Query: 374 L 374
L
Sbjct: 489 L 489
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 128/295 (43%), Gaps = 5/295 (1%)
Query: 25 FNRLLRMSPT----PPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
F L RM + P + ++ ++ S +++ + L + GI P+ T LI+
Sbjct: 205 FTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLID 264
Query: 81 CYCNQAQITSAFSVLAKIL-KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
Y S L ++L + +PD+ T + ++ NGQ++ ++ + G
Sbjct: 265 AYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIE 324
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
+ T+ IL++ K G + +M +Q + Y ++I +F + + L
Sbjct: 325 PNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYL 384
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+ M + R+ P T +L+ + S+ + +L + +I D FN LVDA G+
Sbjct: 385 FRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGR 444
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
E K VL +M K+G KPD ITY +++ Y + K++ + G A
Sbjct: 445 MEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKELHGVVESVGEA 499
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 141/309 (45%), Gaps = 7/309 (2%)
Query: 71 DIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFH 130
D+ L +++N + + ++L + K + ++ G V A
Sbjct: 601 DVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAVN--RVISSFVREGDVSKAEMIA 658
Query: 131 DHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKD 190
D ++ G R+++ T LI + + + A +L G+ P + +I ++ +
Sbjct: 659 DIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLY-LAAGESKTPGKSVIRSMIDAYVRC 717
Query: 191 KLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTF 250
+ DAY L+ E + P T + L+ + +EA + + KNI D +
Sbjct: 718 GWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGY 777
Query: 251 NILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQ 310
N L+ A+ + G ++ A + M GV I TYN+++ Y +++KA +IF++ +
Sbjct: 778 NTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARR 837
Query: 311 RGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSH 370
G+ + Y+ MI K K+ EAL+L +EM K I P T +Y+ ++ +C + R+ H
Sbjct: 838 SGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK-ICATSRLHH 896
Query: 371 AWELVDDVI 379
VD+++
Sbjct: 897 E---VDELL 902
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 126/298 (42%)
Query: 69 SPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQ 128
+P + +I+ Y + A+ + + ++G P +T + L+ L G+ + A
Sbjct: 701 TPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEH 760
Query: 129 FHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFC 188
+ + LD V Y LI + + G+ + A ++ ++ V ++ Y +I +
Sbjct: 761 ISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYG 820
Query: 189 KDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAY 248
+ + A ++S + D Y +I + ++ EA L EM K I P
Sbjct: 821 RGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTP 880
Query: 249 TFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM 308
++N++V E +L M + G D+ TY +L+ Y S+ +A+ +
Sbjct: 881 SYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLV 940
Query: 309 PQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
++GI + +S +++ L K ++EA +M I PD+ +++ G G
Sbjct: 941 KEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCG 998
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 149/335 (44%), Gaps = 3/335 (0%)
Query: 32 SPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSA 91
S TP ++ + V+ A L + G P T++IL+N N+ + A
Sbjct: 699 SKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREA 758
Query: 92 FSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILING 151
+ L++ DT+ + TL+K + G++Q A + ++ + G TY +I+
Sbjct: 759 EHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISV 818
Query: 152 LCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPD 211
+ Q A+++ + + D ++YT +I + K +S+A +L+SEM + + P
Sbjct: 819 YGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPG 878
Query: 212 VFTYNALIYGFCIVSQL-KEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVL 270
+YN ++ C S+L E +LL M D T+ L+ + EA+ +
Sbjct: 879 TPSYNMMV-KICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTI 937
Query: 271 AVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKT 330
++ ++G+ ++SL+ + +A+ + M + GI+P+ ++ G
Sbjct: 938 TLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTC 997
Query: 331 KKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKS 365
++ + L E ++ + D SS+++ L K+
Sbjct: 998 GDAEKGI-LFYEKMIRSSVEDDRFVSSVVEDLYKA 1031
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 143/323 (44%), Gaps = 1/323 (0%)
Query: 40 FNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKIL 99
+N +L+SL K + I L ++ G+ P+ FT T++++ Y Q A ++
Sbjct: 261 YNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMK 320
Query: 100 KRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTR 159
G+ P+ +T+++++ G + A+ ++ + +QG T +++ K
Sbjct: 321 SLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYP 380
Query: 160 AALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
AL L ++ + D + +II + K L DA +++ E +L D TY A+
Sbjct: 381 KALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMS 440
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVK 279
+ +A +++ M T++I + + +++ K NV A+ + K G+
Sbjct: 441 QVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL- 499
Query: 280 PDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNL 339
PD + N +++ Y ++ KAK + + ++ Y + CK V EA +L
Sbjct: 500 PDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDL 559
Query: 340 LAEMDCKNIIPDTVTYSSLIDGL 362
+ +M + + D +L + +
Sbjct: 560 IVKMGREARVKDNRFVQTLAESM 582
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 125/290 (43%), Gaps = 2/290 (0%)
Query: 87 QITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYR 146
Q+ FS + L+ YRP + +T +++ G+++ A + ++ G D V
Sbjct: 170 QVRDFFSWMK--LQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACG 227
Query: 147 ILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLAR 206
++ + G+ A L + +Q + + +Y ++ S K +L+ EM+
Sbjct: 228 TMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEE 287
Query: 207 RVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEA 266
V P+ FTY ++ + +EA K EM + P+ T++ ++ K G+ ++A
Sbjct: 288 GVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKA 347
Query: 267 KTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMING 326
+ M QG+ P T +++ Y KA +F M + I + ++I
Sbjct: 348 IGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRI 407
Query: 327 LCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
K +A ++ E + N++ D TY ++ SG V A ++++
Sbjct: 408 YGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIE 457
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 109/240 (45%)
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
+R V Y I++ ++G+ + A + ++ +PD ++ ++ + S
Sbjct: 184 YRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAML 243
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
Y + RR+L YN ++ S + L EMV + + P+ +T+ ++V +
Sbjct: 244 TFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSY 303
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
K+G +EA M G P+ +TY+S++ + KA ++ M +GI P+
Sbjct: 304 AKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSN 363
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDD 377
++ + M++ KT+ +AL+L A+M+ I D V +I K G A + ++
Sbjct: 364 YTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEE 423
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 152/368 (41%), Gaps = 11/368 (2%)
Query: 5 LRLKNSLPPSIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLD 64
LRLK N ++ +I N + + + N++++S V+ A ++ +
Sbjct: 611 LRLKEG------NLNETKAILNLMFKTDLGSSAV--NRVISSFVREGDVSKAEMIADIII 662
Query: 65 FTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQ 124
G+ + T+ LI Y Q ++ A L P +++ G ++
Sbjct: 663 RLGLRMEEETIATLIAVYGRQHKLKEA-KRLYLAAGESKTPGKSVIRSMIDAYVRCGWLE 721
Query: 125 TALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIII 184
A +G VT IL+N L G+ R A + R + ++ D Y +I
Sbjct: 722 DAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLI 781
Query: 185 HSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIH 244
+ + + A +Y M V + TYN +I + QL +A ++ ++
Sbjct: 782 KAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLY 841
Query: 245 PDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKD- 303
D + ++ GK G + EA ++ + M K+G+KP +YN +M C S ++ D
Sbjct: 842 LDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYN-MMVKICATSRLHHEVDE 900
Query: 304 IFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLC 363
+ +M + G ++ +Y +I ++ + EA + + K I +SSL+ L
Sbjct: 901 LLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALV 960
Query: 364 KSGRVSHA 371
K+G + A
Sbjct: 961 KAGMMEEA 968
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 120/279 (43%)
Query: 70 PDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQF 129
P + TI++ Y +I A ++L+ G PD + T++ G+ L F
Sbjct: 186 PSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTF 245
Query: 130 HDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCK 189
+ V + L Y +++ L K + L ++ + V P+ YT+++ S+ K
Sbjct: 246 YKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAK 305
Query: 190 DKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYT 249
+A + EM + +P+ TY+++I ++A L ++M ++ I P YT
Sbjct: 306 QGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYT 365
Query: 250 FNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMP 309
++ K N +A ++ A M + + D + ++ Y + + A+ +F
Sbjct: 366 CATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETE 425
Query: 310 QRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNI 348
+ + + +Y M + V +AL+++ M ++I
Sbjct: 426 RLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDI 464
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%)
Query: 210 PDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTV 269
P V Y ++ + V ++K A + EM+ PDA ++ + G T
Sbjct: 186 PSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTF 245
Query: 270 LAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCK 329
+ ++ + YN ++ S K D++ M + G+ PN +Y+++++ K
Sbjct: 246 YKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAK 305
Query: 330 TKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+EAL EM +P+ VTYSS+I K+G A L +D+
Sbjct: 306 QGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDM 354
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/378 (19%), Positives = 161/378 (42%), Gaps = 27/378 (7%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++A+ F + + P + ++ +++ VK + AI L + GI P +T +
Sbjct: 310 EEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATM 369
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHD--HVVAQ 136
++ Y A S+ A + + + I +++GL + + L FHD + +
Sbjct: 370 LSLYYKTENYPKALSLFADMER-----NKIPADEVIRGLIIRIYGKLGL-FHDAQSMFEE 423
Query: 137 GFRL----DQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKL 192
RL D+ TY + G AL ++ ++ + + Y +++ + K +
Sbjct: 424 TERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQN 483
Query: 193 VSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNI 252
V A + L++ LPD + N ++ + ++ ++A + +++ +H D +
Sbjct: 484 VDCAEEAF-RALSKTGLPDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKT 542
Query: 253 LVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG 312
+ KEG V EA+ ++ M ++ D +L + +V++ +K + + N
Sbjct: 543 AMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNVSQL-- 600
Query: 313 IAPNVHSYSIMINGLCKTKKVDEA---LNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVS 369
+V + +M+N K ++E LNL+ + D + + V I + G VS
Sbjct: 601 ---DVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAVNRV-----ISSFVREGDVS 652
Query: 370 HAWELVDDVIFIFNVWMS 387
A E++ D+I + M
Sbjct: 653 KA-EMIADIIIRLGLRME 669
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 84/205 (40%)
Query: 174 KPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATK 233
+P V +YTI++ + + + A + EML PD ++ + +
Sbjct: 185 RPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLT 244
Query: 234 LLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYC 293
+ + I +N ++ +L K+ + + M+++GV P+ TY ++ Y
Sbjct: 245 FYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYA 304
Query: 294 LVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTV 353
+A F M G P +YS +I+ K ++A+ L +M + I+P
Sbjct: 305 KQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNY 364
Query: 354 TYSSLIDGLCKSGRVSHAWELVDDV 378
T ++++ K+ A L D+
Sbjct: 365 TCATMLSLYYKTENYPKALSLFADM 389
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 155/352 (44%), Gaps = 13/352 (3%)
Query: 5 LRLKNSLPPSIRNAD-DAVSIFNRLLRMSPT-PPIIEFNKILTSLVKMKHYPTAISL-SH 61
L L N + IR +D DA S R S T P + N I+ ++ + K Y +ISL +
Sbjct: 146 LNLHNRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQY 205
Query: 62 QLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRG-YRPDTITFTTLMKGLCLN 120
+ I P++ + +IN +C++ + A V IL + P ++T+ L KGL
Sbjct: 206 FFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQA 265
Query: 121 GQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMY 180
G++ A ++++G D Y LI G +G A++ +++ + D +
Sbjct: 266 GRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVN 325
Query: 181 TIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVT 240
+ + + +A Y +L ++ T N L+ F + EA L +EM+
Sbjct: 326 ATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLD 385
Query: 241 KNIHPDAYTFN-----ILVDALGKEGNVKEA-KTVLAVMMKQGVKP---DIITYNSLMDG 291
+ P+ + N I+V+ K G EA T V K KP D + Y +++
Sbjct: 386 NHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTR 445
Query: 292 YCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM 343
+C + +A+ F R + + S+ MI+ K +++D+A+ +L M
Sbjct: 446 FCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRM 497
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 154/384 (40%), Gaps = 61/384 (15%)
Query: 5 LRLKNSLPPSIRNA------DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAIS 58
LR S PP R+ D ++ + L + N++ SL++ A
Sbjct: 116 LRRDPSAPPPKRDPNAPRLPDSTSALVGQRLNL--------HNRV-QSLIRASDLDAASK 166
Query: 59 LSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGY-RPDTITFTTLMKGL 117
L+ Q F+ P +FT +I + + + S+ K+ P+ +++ ++
Sbjct: 167 LARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAH 226
Query: 118 CLNGQVQTALQFHDHVVAQG-FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPD 176
C G V AL+ + H++A F VTYR L GL + G+
Sbjct: 227 CDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGR------------------- 267
Query: 177 VEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLD 236
+ DA +L EML++ D YN LI G+ + +A + D
Sbjct: 268 ----------------IGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFD 311
Query: 237 EMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVS 296
E+ +K D ++ ++GN KEA ++ + + T N L++ +
Sbjct: 312 ELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFG 371
Query: 297 EVNKAKDIFNSMPQRGIAPNVHSYS-----IMINGLCKTKKVDEALNLL----AEMDCKN 347
+ ++A +FN M PN+ S + IM+N K + EA+N +++ K
Sbjct: 372 KKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKP 431
Query: 348 IIPDTVTYSSLIDGLCKSGRVSHA 371
+ D + Y +++ C+ G ++ A
Sbjct: 432 FVMDYLGYCNIVTRFCEQGMLTEA 455
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/362 (20%), Positives = 160/362 (44%), Gaps = 12/362 (3%)
Query: 17 NADDAVSIFNRLLRMSP-TPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTL 75
N D+A+ ++ +L +P P + + + LV+ A SL ++ G + D
Sbjct: 231 NVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVY 290
Query: 76 TILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVA 135
LI Y + A ++ + D I T M+ G + A++ + ++
Sbjct: 291 NNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLD 350
Query: 136 QGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDV-----EMYTIIIHSFCKD 190
+ FR+ T +L+ K G+ A L ++ P++ + I+++ K
Sbjct: 351 KKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKM 410
Query: 191 KLVSDAYNLY----SEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
S+A N + S++ ++ + D Y ++ FC L EA + E V++++ D
Sbjct: 411 GEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPAD 470
Query: 247 AYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVS-EVNKAKDIF 305
A + ++DA K + +A +L M+ ++ + + + + G + + ++ ++ ++
Sbjct: 471 APSHRAMIDAYLKAERIDDAVKMLDRMVDVNLR-VVADFGARVFGELIKNGKLTESAEVL 529
Query: 306 NSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKS 365
M +R P+ Y +++ GLC +D+A +++ EM N+ TV +I+ K+
Sbjct: 530 TKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEMIRHNVGVTTVLREFIIEVFEKA 589
Query: 366 GR 367
GR
Sbjct: 590 GR 591
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/257 (17%), Positives = 110/257 (42%), Gaps = 13/257 (5%)
Query: 23 SIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIF-----TLTI 77
S+ ++ RM P N +L +K A +L +++ P+I T+ I
Sbjct: 347 SLLDKKFRMHPP----TGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGI 402
Query: 78 LINCYCNQAQITSAFS----VLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHV 133
++N + + A + V +K+ + + D + + ++ C G + A +F
Sbjct: 403 MVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEG 462
Query: 134 VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLV 193
V++ D ++R +I+ K + A++++ ++ ++ + + K+ +
Sbjct: 463 VSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVADFGARVFGELIKNGKL 522
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNIL 253
+++ + ++M R PD Y+ ++ G C L +A ++ EM+ N+ +
Sbjct: 523 TESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEMIRHNVGVTTVLREFI 582
Query: 254 VDALGKEGNVKEAKTVL 270
++ K G +E + +L
Sbjct: 583 IEVFEKAGRREEIEKIL 599
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 159/363 (43%), Gaps = 27/363 (7%)
Query: 16 RNADDAVSIFNRLLRMSPTPPIIEF----NKILTSLVKMKHYPTAISLSHQLDFTGISPD 71
+N D+ + ++++++ P F L+ LV K +DF G D
Sbjct: 95 KNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAV---WCKAVDF-GYKND 150
Query: 72 IFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHD 131
+F + ++N Y ++ A + K+ KR D I +TT++ G G+ A++F+
Sbjct: 151 VFVCSSVLNLYMKCGKMDEAEVLFGKMAKR----DVICWTTMVTGFAQAGKSLKAVEFYR 206
Query: 132 HVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDK 191
+ +GF D+V L+ +G T+ + R + G L + + M ++ S
Sbjct: 207 EMQNEGFGRDRVVMLGLLQASGDLGDTK----MGRSVHGYLYRTGLPMNVVVETSLVDMY 262
Query: 192 LVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFN 251
+ S + +R + ++ +LI GF +A + + EM + PD T
Sbjct: 263 AKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLV 322
Query: 252 ILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQR 311
++ A + G++K + V ++K+ V D +T +LMD Y ++ +++IF + ++
Sbjct: 323 GVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGRK 381
Query: 312 GIA---PNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRV 368
+ + Y I NG E ++L +M NI PD T++SL+ L SG V
Sbjct: 382 DLVCWNTMISCYGIHGNG-------QEVVSLFLKMTESNIEPDHATFASLLSALSHSGLV 434
Query: 369 SHA 371
Sbjct: 435 EQG 437
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 193 VSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNI 252
+S A ++ E+ R V YN++I + E +L D+M+ + I PD+ TF +
Sbjct: 66 ISYARKVFDELPQR----GVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTM 121
Query: 253 LVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG 312
+ A +++ + V + G K D+ +S+++ Y ++++A+ +F M +R
Sbjct: 122 TIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKR- 180
Query: 313 IAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLID-----GLCKSGR 367
+V ++ M+ G + K +A+ EM + D V L+ G K GR
Sbjct: 181 ---DVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGR 237
Query: 368 VSHAW 372
H +
Sbjct: 238 SVHGY 242
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 117/280 (41%), Gaps = 40/280 (14%)
Query: 128 QFHDHVVAQGFRLDQVTY-RILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS 186
Q H V++ G L+ + R LI ++G+ A R++ +L + V +Y +I
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIASCGRIGEISYA----RKVFDELPQRGVSVYNSMIVV 90
Query: 187 FCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPD 246
+ + K + LY +M+A ++ PD T+ I L++ + + V D
Sbjct: 91 YSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKND 150
Query: 247 AYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFN 306
+ + +++ K G + EA+ + M K+ D+I + +++ G+ + KA + +
Sbjct: 151 VFVCSSVLNLYMKCGKMDEAEVLFGKMAKR----DVICWTTMVTGFAQAGKSLKAVEFYR 206
Query: 307 SMPQRG----------------------IAPNVHSY----SIMINGLCKTKKVD-----E 335
M G + +VH Y + +N + +T VD
Sbjct: 207 EMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVG 266
Query: 336 ALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
+ + + + + + V++ SLI G ++G + A+E V
Sbjct: 267 FIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAV 306
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 158/374 (42%), Gaps = 39/374 (10%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
++ V I + + I+ +N IL+ + ++ A+ + ++ G PD T++ +
Sbjct: 199 EEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSV 258
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMK----------------------- 115
+ + + + ++K+G D + ++
Sbjct: 259 LPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEA 318
Query: 116 --------GLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQ 167
GL NG V AL+ + Q L+ V++ +I G + G+ AL+L R+
Sbjct: 319 GVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFRE 378
Query: 168 IQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQ 227
+Q VKP+ ++ + + + + + +L +V +ALI + +
Sbjct: 379 MQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGR 438
Query: 228 LKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNS 287
+ + + + M TKN+ +N L++ G KE ++ +M+ +KPD I++ S
Sbjct: 439 INLSQIVFNMMPTKNL----VCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTS 494
Query: 288 LMDGYCLVSEVNKAKDIFNSMPQR-GIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCK 346
L+ V ++ F M + GI P + YS M+N L + K+ EA +L+ EM +
Sbjct: 495 LLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFE 554
Query: 347 NIIPDTVTYSSLID 360
PD+ + +L++
Sbjct: 555 ---PDSCVWGALLN 565
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/354 (16%), Positives = 150/354 (42%), Gaps = 12/354 (3%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
DA +F+R+ ++ + +L + + + + +++ +GI +I + ++
Sbjct: 169 DARKVFDRM----SDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGIL 224
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ + A + KI G+ PD +T ++++ + + + H +V+ QG
Sbjct: 225 SGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLL 284
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNL 199
D+ +I+ K G + L Q + + + I ++ LV A +
Sbjct: 285 KDKCVISAMIDMYGKSGHVYGIISLFNQFE----MMEAGVCNAYITGLSRNGLVDKALEM 340
Query: 200 YSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGK 259
+ + + +V ++ ++I G + EA +L EM + P+ T ++ A G
Sbjct: 341 FELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGN 400
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
+ ++ ++ + ++ ++L+D Y +N ++ +FN MP + N+
Sbjct: 401 IAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK----NLVC 456
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWE 373
++ ++NG K E +++ + + PD ++++SL+ + G W+
Sbjct: 457 WNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK 510
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/311 (18%), Positives = 131/311 (42%), Gaps = 12/311 (3%)
Query: 70 PDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQF 129
P I++ + LI T + V +++ G PD+ L K + Q
Sbjct: 79 PTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQI 138
Query: 130 HDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCK 189
H G +D + + + G+ A R++ ++ DV + ++ ++ +
Sbjct: 139 HCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDA----RKVFDRMSDKDVVTCSALLCAYAR 194
Query: 190 DKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYT 249
+ + + SEM + + ++ ++N ++ GF KEA + ++ PD T
Sbjct: 195 KGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVT 254
Query: 250 FNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFN--S 307
+ ++ ++G + + + ++KQG+ D ++++D Y V +FN
Sbjct: 255 VSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFE 314
Query: 308 MPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGR 367
M + G+ + I GL + VD+AL + + + + V+++S+I G ++G+
Sbjct: 315 MMEAGVC------NAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGK 368
Query: 368 VSHAWELVDDV 378
A EL ++
Sbjct: 369 DIEALELFREM 379
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 157/356 (44%), Gaps = 20/356 (5%)
Query: 24 IFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYC 83
++ R+L S F +L + + + + Q+ G D++ + LIN Y
Sbjct: 102 LYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYA 161
Query: 84 NQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQV 143
+T F + + R PD +++ +++KG G++ AL + + + +
Sbjct: 162 ----VTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEK----NAI 213
Query: 144 TYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEM 203
++ +I+G + + ALQL ++Q V+PD + + + + ++S +
Sbjct: 214 SWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYL 273
Query: 204 LARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNV 263
R+ D LI + +++EA ++ + K++ + L+ G+
Sbjct: 274 NKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQ----AWTALISGYAYHGHG 329
Query: 264 KEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQR-GIAPNVHSYSI 322
+EA + M K G+KP++IT+ +++ V + K IF SM + + P + Y
Sbjct: 330 REAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGC 389
Query: 323 MINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+++ L + +DEA + EM K P+ V + +L+ K+ R+ EL +++
Sbjct: 390 IVDLLGRAGLLDEAKRFIQEMPLK---PNAVIWGALL----KACRIHKNIELGEEI 438
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 133/311 (42%), Gaps = 13/311 (4%)
Query: 62 QLDFTGIS-PDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLN 120
Q+ F G PD F ++I + + + + ++L + TF +L+K
Sbjct: 69 QIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNL 128
Query: 121 GQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMY 180
+ Q H + G+ D LIN G + A L +I +PD +
Sbjct: 129 SAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIP----EPDDVSW 184
Query: 181 TIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVT 240
+I + K + A L+ +M + + ++ +I G+ KEA +L EM
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEK----NAISWTTMISGYVQADMNKEALQLFHEMQN 240
Query: 241 KNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNK 300
++ PD + + A + G +++ K + + + K ++ D + L+D Y E+ +
Sbjct: 241 SDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEE 300
Query: 301 AKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLID 360
A ++F ++ ++ +V +++ +I+G EA++ EM I P+ +T+++++
Sbjct: 301 ALEVFKNIKKK----SVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLT 356
Query: 361 GLCKSGRVSHA 371
+G V
Sbjct: 357 ACSYTGLVEEG 367
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 11/217 (5%)
Query: 165 MRQIQGQLVKPDV--EMYTII-IHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYG 221
++QI +++K + + Y I SFC SD + PD F +N +I G
Sbjct: 30 LKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRG 89
Query: 222 FCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPD 281
F + + + L M+ + +AYTF L+ A +E + A + K G + D
Sbjct: 90 FSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEND 149
Query: 282 IITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLA 341
+ NSL++ Y + A +F+ +P+ P+ S++ +I G K K+D AL L
Sbjct: 150 VYAVNSLINSYAVTGNFKLAHLLFDRIPE----PDDVSWNSVIKGYVKAGKMDIALTLFR 205
Query: 342 EMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+M KN I +++++I G ++ A +L ++
Sbjct: 206 KMAEKNAI----SWTTMISGYVQADMNKEALQLFHEM 238
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 168/432 (38%), Gaps = 77/432 (17%)
Query: 11 LPPSIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVK-MKHYPTAISLSHQLDFTGIS 69
+P ++ D S F L ++ P FN ++ L + A+SL ++ F+G+
Sbjct: 72 IPKAVELGDFNYSSF--LFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLK 129
Query: 70 PDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQF 129
PD FT + +I SV + + K G D +L+ GQV A +
Sbjct: 130 PDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKL 189
Query: 130 HDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPD----VEMYTIIIH 185
D + + D V++ +I+G + G + A+ L R+++ + +PD V M H
Sbjct: 190 FDEITER----DTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSH 245
Query: 186 ----------------------SFCKDKLVSDAYNLYSEM-LARRVL-----PDVFTYNA 217
+F KL+S Y ++ ARRV D + A
Sbjct: 246 LGDLRTGRLLEEMAITKKIGLSTFLGSKLIS-MYGKCGDLDSARRVFNQMIKKDRVAWTA 304
Query: 218 LIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQG 277
+I + + EA KL EM + PDA T + ++ A G G ++ K + +
Sbjct: 305 MITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELS 364
Query: 278 VKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEAL 337
++ +I L+D Y V +A +F +MP + N +++ MI EAL
Sbjct: 365 LQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVK----NEATWNAMITAYAHQGHAKEAL 420
Query: 338 NLLAEMD------------------------CK---------NIIPDTVTYSSLIDGLCK 364
L M C+ ++P Y+++ID L +
Sbjct: 421 LLFDRMSVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSR 480
Query: 365 SGRVSHAWELVD 376
+G + AWE ++
Sbjct: 481 AGMLDEAWEFME 492
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 163/353 (46%), Gaps = 30/353 (8%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
D A+ +F+ + R T I +N +L + K P+ + +HQL PD F+ I+
Sbjct: 78 DGALRVFHGM-RAKNT---ITWNSLLIGISKD---PSRMMEAHQLFDEIPEPDTFSYNIM 130
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
++CY A S ++ + D ++ T++ G G+++ A + ++ +
Sbjct: 131 LSCYVRNVNFEKAQSFFDRMPFK----DAASWNTMITGYARRGEMEKARELFYSMMEK-- 184
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKP--DVEMYTIIIHSFCKDKLVSDA 196
++V++ +I+G + G A + V P V +T +I + K K V A
Sbjct: 185 --NEVSWNAMISGYIECGDLEKASHFFK------VAPVRGVVAWTAMITGYMKAKKVELA 236
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
++ +M + ++ T+NA+I G+ S+ ++ KL M+ + I P++ + +
Sbjct: 237 EAMFKDMTVNK---NLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLG 293
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
+ ++ + + ++ K + D+ SL+ YC E+ A +F M ++ +
Sbjct: 294 CSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK----D 349
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVS 369
V +++ MI+G + D+AL L EM I PD +T+ +++ +G V+
Sbjct: 350 VVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVN 402
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 17/240 (7%)
Query: 108 ITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQ 167
+T+ ++ G N + + L+ ++ +G R + + G ++ +ALQL RQ
Sbjct: 250 VTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSEL----SALQLGRQ 305
Query: 168 IQGQLVKP----DVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFC 223
I + K DV T +I +CK + DA+ L+ M + DV +NA+I G+
Sbjct: 306 IHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK----DVVAWNAMISGYA 361
Query: 224 IVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQ-GVKPDI 282
+A L EM+ I PD TF ++ A G V M++ V+P
Sbjct: 362 QHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQP 421
Query: 283 ITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAE 342
Y ++D ++ +A + SMP R P+ + ++ G C+ K E AE
Sbjct: 422 DHYTCMVDLLGRAGKLEEALKLIRSMPFR---PHAAVFGTLL-GACRVHKNVELAEFAAE 477
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 86/174 (49%), Gaps = 9/174 (5%)
Query: 93 SVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGL 152
+ ++ +RG +T+T+TTL++GL G A + +V+ G D +TY IL++GL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 153 CKMGQTRAALQLMRQIQG---------QLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEM 203
CK G+ AL + G + VKP+V YT +I FCK +AY L+ +M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 204 LARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
LPD TYN LI + +L+ EM + DA T+ ++ D L
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 175
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 82/155 (52%), Gaps = 9/155 (5%)
Query: 233 KLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGY 292
+L EM + + + T+ L+ L + G+ A+ + M+ GV PDI+TYN L+DG
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 293 C---------LVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM 343
C + +V D+F S+ +G+ PNV +Y+ MI+G CK +EA L +M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 344 DCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+PD+ TY++LI + G + + EL+ ++
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 10/184 (5%)
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
L+ EM R ++ + TY LI G A ++ EMV+ + PD T+NIL+D L
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 258 GKEGNVKEAKTVLAV---------MMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM 308
K G +++A V + +GVKP+++TY +++ G+C +A +F M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 309 PQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRV 368
+ G P+ +Y+ +I + + L+ EM D TY + D + GR+
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD-MLHDGRL 180
Query: 369 SHAW 372
+
Sbjct: 181 DKGF 184
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/171 (18%), Positives = 71/171 (41%), Gaps = 9/171 (5%)
Query: 22 VSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINC 81
+ +F + + + + ++ L + A + ++ G+ PDI T IL++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 82 YCNQAQITSA---------FSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDH 132
C ++ A + + + +G +P+ +T+TT++ G C G + A
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 133 VVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTII 183
+ G D TY LI + G A+ +L+++++ D Y ++
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 171
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 159/395 (40%), Gaps = 46/395 (11%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
+++S++ +LR +P F IL S + + L + G + F LT LI
Sbjct: 36 ESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALI 95
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ YC + A V + + ++ + L+ G N +V A + G
Sbjct: 96 SMYCKCGLVADARKVFEENPQSSQL--SVCYNALISGYTANSKVTDAAYMFRRMKETGVS 153
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFC----KDKLVSD 195
+D VT + GL + L L R + GQ VK ++ +++SF K V
Sbjct: 154 VDSVT----MLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEA 209
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
L+ EM + ++ T+NA+I G+ + +L ++M + + PD +T ++
Sbjct: 210 GRRLFDEMPVKGLI----TWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLS 265
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMP------ 309
+ G K V ++ G P++ N+ + Y + KA+ +F+ MP
Sbjct: 266 SCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVS 325
Query: 310 -------------------------QRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMD 344
+RGI P+ + ++++ + D+ L L M
Sbjct: 326 WTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMK 385
Query: 345 CK-NIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+ + P YS L+D L ++GR+ A E ++ +
Sbjct: 386 REYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESM 420
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 119/308 (38%), Gaps = 44/308 (14%)
Query: 85 QAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVT 144
Q+ + + S+ +L+ G PD +F ++K + Q H HV G +
Sbjct: 31 QSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFV 90
Query: 145 YRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEML 204
LI+ CK G LV+DA ++ E
Sbjct: 91 LTALISMYCKCG-----------------------------------LVADARKVFEENP 115
Query: 205 ARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVK 264
L YNALI G+ S++ +A + M + D+ T LV +
Sbjct: 116 QSSQLS--VCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLW 173
Query: 265 EAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMI 324
+++ +K G+ ++ NS + Y V + +F+ MP +G+ +++ +I
Sbjct: 174 LGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLI----TWNAVI 229
Query: 325 NGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG--RVSH-AWELVDDVIFI 381
+G + + L L +M + PD T S++ G ++ H +LV+ F+
Sbjct: 230 SGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFV 289
Query: 382 FNVWMSYA 389
NV++S A
Sbjct: 290 PNVFVSNA 297
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/310 (18%), Positives = 130/310 (41%), Gaps = 22/310 (7%)
Query: 58 SLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGL 117
SL Q G+ ++ L I Y + + + ++ +G IT+ ++ G
Sbjct: 177 SLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKG----LITWNAVISGY 232
Query: 118 CLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDV 177
NG L+ ++ + + G D T +++ +G + ++ + ++ P+V
Sbjct: 233 SQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNV 292
Query: 178 EMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDE 237
+ I + + ++ A ++ M + ++ ++ A+I + + + L D+
Sbjct: 293 FVSNASISMYARCGNLAKARAVFDIMPVKSLV----SWTAMIGCYGMHGMGEIGLMLFDD 348
Query: 238 MVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQ-GVKPDIITYNSLMDGYCLVS 296
M+ + I PD F +++ A G + + M ++ ++P Y+ L+D
Sbjct: 349 MIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAG 408
Query: 297 EVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKT-KKVDEALNLLAEMDCKNII---PDT 352
+++A + SMP + P+ + ++ G CK K VD +AE+ +I P+
Sbjct: 409 RLDEAMEFIESMP---VEPDGAVWGALL-GACKIHKNVD-----MAELAFAKVIEFEPNN 459
Query: 353 VTYSSLIDGL 362
+ Y L+ +
Sbjct: 460 IGYYVLMSNI 469
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 141/313 (45%), Gaps = 9/313 (2%)
Query: 71 DIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFH 130
D+ T T +IN Y + +A + + G RP+ +T +L+ +C + AL+ +
Sbjct: 283 DVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVS-VCGD-----ALKVN 336
Query: 131 DHVVAQGFRLDQVTYR--ILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFC 188
D G+ + Q Y I+ L M + L ++ K ++ II
Sbjct: 337 DGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCV 396
Query: 189 KDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAY 248
+++LVSDA L+ M V P++ T N+L+ + ++ L++A + +
Sbjct: 397 QNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLD 456
Query: 249 TFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM 308
LV K G ++ A + + ++ D++ + +L+ GY + + + A +F M
Sbjct: 457 AATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEM 516
Query: 309 PQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM-DCKNIIPDTVTYSSLIDGLCKSGR 367
+ G+ PN +++ +N + V+E L L M + + + Y+ ++D L ++GR
Sbjct: 517 VRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGR 576
Query: 368 VSHAWELVDDVIF 380
+ A+ L+ + F
Sbjct: 577 LDEAYNLITTIPF 589
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 138/316 (43%), Gaps = 17/316 (5%)
Query: 78 LINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQG 137
L+N Y ++ A V ++ +R D IT+T ++ G +G V+ AL+ + +G
Sbjct: 259 LVNMYLKCGRMDEARFVFDRMERR----DVITWTCMINGYTEDGDVENALELCRLMQFEG 314
Query: 138 FRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAY 197
R + VT L++ + L Q V D+ + T +I + K K V +
Sbjct: 315 VRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCF 374
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQL-KEATKLLDEMVTKNIHPDAYTFNILVDA 256
++S P ++A+I G C+ ++L +A L M +++ P+ T N L+ A
Sbjct: 375 RVFSGASKYHTGP----WSAIIAG-CVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA 429
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPN 316
++++A + + K G + L+ Y + A IFN + ++ + +
Sbjct: 430 YAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKD 489
Query: 317 VHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVD 376
V + +I+G AL + EM + P+ +T++S ++ SG LV+
Sbjct: 490 VVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSG-------LVE 542
Query: 377 DVIFIFNVWMSYAKAI 392
+ + +F + + K +
Sbjct: 543 EGLTLFRFMLEHYKTL 558
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 106/265 (40%), Gaps = 13/265 (4%)
Query: 20 DAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILI 79
DA+ +F R+ R P I N +L + + A+++ L TG + T L+
Sbjct: 403 DALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLV 462
Query: 80 NCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFR 139
+ Y + SA + I ++ D + + L+ G ++G ALQ +V G
Sbjct: 463 HVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVT 522
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMR-QIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
+++T+ +N G L L R ++ YT I+ + + +AYN
Sbjct: 523 PNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYN 582
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTK---NIHPD-AYTFNILV 254
L + +P F + ++G + + + L EM + P+ + +L
Sbjct: 583 LIT------TIP--FEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLA 634
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVK 279
+ G K+ + V ++M G++
Sbjct: 635 NIYAALGRWKDMEKVRSMMENVGLR 659
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 74/122 (60%)
Query: 258 GKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNV 317
GK A T L M + G+ P ++ Y +L+DGY + E++KAK++F M +G PNV
Sbjct: 700 GKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNV 759
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDD 377
+Y+ MI GLC + EA LL EM+ + P+ V YS+L+ L K+G++S A +++ +
Sbjct: 760 FTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKE 819
Query: 378 VI 379
++
Sbjct: 820 MV 821
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 66/118 (55%)
Query: 160 AALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALI 219
AAL + ++ + P V YT +I + + A ++ EM + LP+VFTYN++I
Sbjct: 707 AALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 766
Query: 220 YGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQG 277
G C+ + +EA LL EM ++ +P+ ++ LV L K G + EA+ V+ M+K+G
Sbjct: 767 RGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%)
Query: 231 ATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMD 290
A L+ M I P + L+D G + +AK + M +G P++ TYNS++
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 291 GYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEM 343
G C+ E +A + M RG PN YS ++ L K K+ EA ++ EM
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEM 820
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 54/103 (52%)
Query: 210 PDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTV 269
P V Y LI G+ + +L +A ++ EM K P+ +T+N ++ L G +EA +
Sbjct: 722 PSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWL 781
Query: 270 LAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRG 312
L M +G P+ + Y++L+ ++++A+ + M ++G
Sbjct: 782 LKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 61/117 (52%)
Query: 90 SAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILI 149
+A + L + + G P + +TTL+ G ++G++ A + + +G + TY +I
Sbjct: 707 AALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 766
Query: 150 NGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLAR 206
GLC G+ R A L+++++ + P+ +Y+ ++ K +S+A + EM+ +
Sbjct: 767 RGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKK 823
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 61/128 (47%), Gaps = 10/128 (7%)
Query: 41 NKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILK 100
NK L +L + H + GI P + T LI+ Y ++ A + ++
Sbjct: 703 NKPLAALTTLNH----------MKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTV 752
Query: 101 RGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRA 160
+G P+ T+ ++++GLC+ G+ + A + ++G + V Y L+ L K G+
Sbjct: 753 KGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSE 812
Query: 161 ALQLMRQI 168
A ++++++
Sbjct: 813 ARKVIKEM 820
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 131/314 (41%), Gaps = 12/314 (3%)
Query: 71 DIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFH 130
D+ + LIN Y + A V + G +PD +T L+ + G + +F+
Sbjct: 221 DLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280
Query: 131 DHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKD 190
++V G R+ L++ K G A R+I L K + +T +I + +
Sbjct: 281 EYVKENGLRMTIPLVNALMDMFSKCGDIHEA----RRIFDNLEKRTIVSWTTMISGYARC 336
Query: 191 KLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTF 250
L+ + L+ +M + DV +NA+I G + ++A L EM T N PD T
Sbjct: 337 GLLDVSRKLFDDMEEK----DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITM 392
Query: 251 NILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQ 310
+ A + G + + + K + ++ SL+D Y +++A +F+ +
Sbjct: 393 IHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQT 452
Query: 311 RGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSH 370
R N +Y+ +I GL A++ EM I PD +T+ L+ C G +
Sbjct: 453 R----NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQT 508
Query: 371 AWELVDDVIFIFNV 384
+ + FN+
Sbjct: 509 GRDYFSQMKSRFNL 522
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 160/374 (42%), Gaps = 33/374 (8%)
Query: 14 SIRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIF 73
S + ++A +F+ SP ++ +N ++ K+ AI + ++ G+ PD
Sbjct: 203 SCGDMENARKVFDE----SPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDV 258
Query: 74 TLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHV 133
T+ L++ + + + G R LM G + A + D++
Sbjct: 259 TMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNL 318
Query: 134 VAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLV 193
+ V++ +I+G + G L + R++ + + DV ++ +I + K
Sbjct: 319 EKRTI----VSWTTMISGYARCG----LLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRG 370
Query: 194 SDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNI- 252
DA L+ EM PD T +I+ SQL LD + + + + Y+ ++
Sbjct: 371 QDALALFQEMQTSNTKPDEIT---MIHCLSACSQLGA----LDVGIWIHRYIEKYSLSLN 423
Query: 253 ------LVDALGKEGNVKEAKTVLAVMMKQGVKP-DIITYNSLMDGYCLVSEVNKAKDIF 305
LVD K GN+ EA +V G++ + +TY +++ G L + + A F
Sbjct: 424 VALGTSLVDMYAKCGNISEALSVF-----HGIQTRNSLTYTAIIGGLALHGDASTAISYF 478
Query: 306 NSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCK-NIIPDTVTYSSLIDGLCK 364
N M GIAP+ ++ +++ C + + ++M + N+ P YS ++D L +
Sbjct: 479 NEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGR 538
Query: 365 SGRVSHAWELVDDV 378
+G + A L++ +
Sbjct: 539 AGLLEEADRLMESM 552
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/292 (19%), Positives = 125/292 (42%), Gaps = 60/292 (20%)
Query: 138 FRLDQVTYRILINGL-------------CKMGQTRAALQLMRQIQGQLVKPDVEMYTIII 184
L Q+ +++INGL C + ++R ++ ++G + P++ + + I
Sbjct: 67 LHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKG-IENPNIFSWNVTI 125
Query: 185 HSFCKDKLVSDAYNLYSEMLAR---RVLPDVFTY-------------------------- 215
F + + +++ LY +ML PD FTY
Sbjct: 126 RGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKL 185
Query: 216 ---------NALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEA 266
NA I+ F ++ A K+ DE + D ++N L++ K G ++A
Sbjct: 186 RLELVSHVHNASIHMFASCGDMENARKVFDESPVR----DLVSWNCLINGYKKIGEAEKA 241
Query: 267 KTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMING 326
V +M +GVKPD +T L+ ++ ++N+ K+ + + + G+ + + +++
Sbjct: 242 IYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDM 301
Query: 327 LCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
K + EA + ++ + I V+++++I G + G + + +L DD+
Sbjct: 302 FSKCGDIHEARRIFDNLEKRTI----VSWTTMISGYARCGLLDVSRKLFDDM 349
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 91/222 (40%), Gaps = 8/222 (3%)
Query: 71 DIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFH 130
D+ +I + A ++ ++ +PD IT + G + + H
Sbjct: 353 DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIH 412
Query: 131 DHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKD 190
++ L+ L++ K G AL + IQ + + YT II
Sbjct: 413 RYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR----NSLTYTAIIGGLALH 468
Query: 191 KLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTK-NIHPDAYT 249
S A + ++EM+ + PD T+ L+ C ++ +M ++ N++P
Sbjct: 469 GDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKH 528
Query: 250 FNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDG 291
++I+VD LG+ G ++EA ++ M ++ D + +L+ G
Sbjct: 529 YSIMVDLLGRAGLLEEADRLMESM---PMEADAAVWGALLFG 567
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 160/350 (45%), Gaps = 22/350 (6%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTIL 78
+DA +F+++ P +I + ++++ K K + A+ L + + P+++T + +
Sbjct: 113 NDAHQLFDQM----PQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSV 168
Query: 79 INCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
+ CN ++ + I+K G D + L+ G+ + AL D +V
Sbjct: 169 LRS-CNG--MSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTG-- 223
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYN 198
D + + +I G + ++ AL+L ++++ + T ++ + L+
Sbjct: 224 --DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQ 281
Query: 199 LYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG 258
+ ++ + D+ NAL+ +C L++A ++ ++M + D T++ ++ L
Sbjct: 282 AHVHIV--KYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER----DVITWSTMISGLA 335
Query: 259 KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQ-RGIAPNV 317
+ G +EA + M G KP+ IT ++ + F SM + GI P
Sbjct: 336 QNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVR 395
Query: 318 HSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGR 367
Y MI+ L K K+D+A+ LL EM+C+ PD VT+ +L+ G C+ R
Sbjct: 396 EHYGCMIDLLGKAGKLDDAVKLLNEMECE---PDAVTWRTLL-GACRVQR 441
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 147/362 (40%), Gaps = 48/362 (13%)
Query: 44 LTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGY 103
T L + P A+ L G+ D T + LI C + + + + G+
Sbjct: 33 FTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGH 92
Query: 104 RPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQ 163
RP L+ + A Q D + + +++ +I+ K + AL+
Sbjct: 93 RPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNV----ISWTTMISAYSKCKIHQKALE 148
Query: 164 LMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFC 223
L+ + V+P+V Y+ ++ S C +SD L+ ++ + DVF +ALI F
Sbjct: 149 LLVLMLRDNVRPNVYTYSSVLRS-CNG--MSDVRMLHCGIIKEGLESDVFVRSALIDVFA 205
Query: 224 IVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALG----------------KEGNVKEAK 267
+ + ++A + DEMVT DA +N ++ + G + E
Sbjct: 206 KLGEPEDALSVFDEMVT----GDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQA 261
Query: 268 TVLAVM--------MKQGVKP---------DIITYNSLMDGYCLVSEVNKAKDIFNSMPQ 310
T+ +V+ ++ G++ D+I N+L+D YC + A +FN M +
Sbjct: 262 TLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKE 321
Query: 311 RGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSH 370
R +V ++S MI+GL + EAL L M P+ +T ++ +G +
Sbjct: 322 R----DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLED 377
Query: 371 AW 372
W
Sbjct: 378 GW 379
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 106/223 (47%), Gaps = 11/223 (4%)
Query: 152 LCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPD 211
LC A++ M +Q + D Y+ +I ++ V + + + P
Sbjct: 36 LCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPM 95
Query: 212 VFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLA 271
+F N LI + + L +A +L D+M +N+ ++ ++ A K ++A +L
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNV----ISWTTMISAYSKCKIHQKALELLV 151
Query: 272 VMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTK 331
+M++ V+P++ TY+S++ +S+V + + + + G+ +V S +I+ K
Sbjct: 152 LMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLG 208
Query: 332 KVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHAWEL 374
+ ++AL++ EM + D + ++S+I G ++ R A EL
Sbjct: 209 EPEDALSVFDEM----VTGDAIVWNSIIGGFAQNSRSDVALEL 247
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 158/364 (43%), Gaps = 50/364 (13%)
Query: 15 IRNADDAVSIFNRLLRMSPTPPIIEFNKILT--SLVKMKHYP--TAISLSHQLDFTGISP 70
+++ D A++I+ + S +P + LT L K + + A+ SH+ + I
Sbjct: 43 VQDPDKALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIEALIESHK-NNPKIKT 101
Query: 71 DIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQV-QTALQF 129
+ F L+ LI Y + A + ++ K G ++F L+ CL+ + + Q
Sbjct: 102 ETF-LSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALL-AACLHSDLFERVPQL 159
Query: 130 HDHVVAQ--GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSF 187
D + D+++Y +LI C G+ A+++MR ++ + V+ + +T I+ S
Sbjct: 160 FDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSL 219
Query: 188 CKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDA 247
K+ LV +A +L+ E MV K D
Sbjct: 220 YKNGLVDEAESLWIE-----------------------------------MVNKGCDLDN 244
Query: 248 YTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNS 307
+N+ + KE + + K ++ M G+KPD ++YN LM YC+ +++AK ++
Sbjct: 245 TVYNVRLMNAAKE-SPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEG 303
Query: 308 MPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGR 367
+ Q PN ++ +I LC D+ L + + + IPD T L +GL K+ R
Sbjct: 304 LEQ----PNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNR 359
Query: 368 VSHA 371
+ A
Sbjct: 360 MEDA 363
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 128/286 (44%), Gaps = 9/286 (3%)
Query: 19 DDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQL--DFTGISPDIFTLT 76
D A+ +F + ++ ++ FN +L + + + L + + I+PD +
Sbjct: 119 DHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYG 178
Query: 77 ILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQ 136
+LI YC+ + A ++ + +G I FTT++ L NG V A +V +
Sbjct: 179 MLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNK 238
Query: 137 GFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDA 196
G LD Y + + K R +LM ++ +KPD Y ++ ++C ++S+A
Sbjct: 239 GCDLDNTVYNVRLMNAAKESPERVK-ELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEA 297
Query: 197 YNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDA 256
+Y E L + P+ T+ LI+ CI + + + + PD T L +
Sbjct: 298 KKVY-EGLEQ---PNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEG 353
Query: 257 LGKEGNVKEAKTVLAVMMKQGVKPDIIT-YNSLMDGYCLVSEVNKA 301
L K +++A+ V A ++K+ P ++T + L + L S+ N A
Sbjct: 354 LVKNNRMEDARGV-ARIVKKKFPPRLVTEWKKLEEKLGLYSKGNAA 398
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 250 FNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEV-NKAKDIFNSM 308
+ L+ + G+ A + M K G ++++N+L+ CL S++ + +F+
Sbjct: 105 LSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALL-AACLHSDLFERVPQLFDEF 163
Query: 309 PQR--GIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
PQR I P+ SY ++I C + K ++A+ ++ +M+ K + + +++++ L K+G
Sbjct: 164 PQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNG 223
Query: 367 RVSHAWEL 374
V A L
Sbjct: 224 LVDEAESL 231
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 154/362 (42%), Gaps = 25/362 (6%)
Query: 21 AVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILIN 80
A +F R+ P P + FN ++ K A+ L ++ GI PD +T+ L+
Sbjct: 185 AEKVFARM----PHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLV 240
Query: 81 CYCNQAQITSAFSVLAKILKRG--YRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGF 138
C + + I V I +RG Y + I L+ + A + D + +
Sbjct: 241 CCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDM 300
Query: 139 RLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSF----CKDKLVS 194
R ++ ++ G ++G AA + + Q+ K D+ + ++ + C + V
Sbjct: 301 R----SWNTMVVGFVRLGDMEAA----QAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVR 352
Query: 195 DAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILV 254
+ + Y + +V PD T +LI G +L + ++ + DA+ + L+
Sbjct: 353 ELF--YEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALI 410
Query: 255 DALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
D K G ++ A V K + D+ + S++ G +A +F M + G+
Sbjct: 411 DMYCKCGIIERAFMVF----KTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVT 466
Query: 315 PNVHSYSIMINGLCKTKKVDEALNLLAEMDCK-NIIPDTVTYSSLIDGLCKSGRVSHAWE 373
PN + ++ + V+E L++ M K P+T Y SL+D LC++GRV A +
Sbjct: 467 PNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKD 526
Query: 374 LV 375
+V
Sbjct: 527 IV 528
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 144/346 (41%), Gaps = 64/346 (18%)
Query: 25 FNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQL--DFTGISPDIFTLTILINCY 82
FN + P +I F+ I YP + L+ L +FT +P++F +I+
Sbjct: 60 FNLICDTFPMSRLIFFSAIT--------YPENLDLAKLLFLNFTP-NPNVFVYNTMISAV 110
Query: 83 CNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQ 142
+ F + + +++ PD TF LMK +V+ Q H H++ G
Sbjct: 111 SSSK--NECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVK---QIHCHIIVSG----- 160
Query: 143 VTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSE 202
L L + LVK +E+ + + +
Sbjct: 161 ------------------CLSLGNYLWNSLVKFYMEL---------------GNFGVAEK 187
Query: 203 MLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGN 262
+ AR PDV ++N +I G+ EA KL +MV+ I PD YT L+ G +
Sbjct: 188 VFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSD 247
Query: 263 VKEAKTVLAVMMKQG--VKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSY 320
++ K V + ++G ++I N+L+D Y E AK F++M ++ ++ S+
Sbjct: 248 IRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKK----DMRSW 303
Query: 321 SIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLCKSG 366
+ M+ G + ++ A + +M + D V+++SL+ G K G
Sbjct: 304 NTMVVGFVRLGDMEAAQAVFDQMPKR----DLVSWNSLLFGYSKKG 345
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 9/208 (4%)
Query: 83 CNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQ 142
C+Q + F + + K +PD +T +L+ G NG++ H V+ + D
Sbjct: 346 CDQRTVRELFYEMTIVEK--VKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDA 403
Query: 143 VTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSE 202
LI+ CK G A + + + DV ++T +I A L+
Sbjct: 404 FLSSALIDMYCKCGIIERAFMVFKTA----TEKDVALWTSMITGLAFHGNGQQALQLFGR 459
Query: 203 MLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTK-NIHPDAYTFNILVDALGKEG 261
M V P+ T A++ ++E + + M K P+ + LVD L + G
Sbjct: 460 MQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAG 519
Query: 262 NVKEAKTVLAVMMKQGVKPDIITYNSLM 289
V+EAK + V K ++P + S++
Sbjct: 520 RVEEAKDI--VQKKMPMRPSQSMWGSIL 545
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/335 (19%), Positives = 153/335 (45%), Gaps = 12/335 (3%)
Query: 33 PTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAF 92
P ++ +N ++ + + A+ + +GI + F+ L+ Q+
Sbjct: 140 PERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNR 199
Query: 93 SVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGL 152
++L G+ + + +++ GQ+++A + D + + + + LI+G
Sbjct: 200 QAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHI----WTTLISGY 255
Query: 153 CKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDV 212
K+G AA +L ++ + + +T +I + + + A +L+ +M+A V P+
Sbjct: 256 AKLGDMEAAEKLF----CEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQ 311
Query: 213 FTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAV 272
FT+++ + ++ L+ ++ M+ N+ P+A + L+D K G+++ ++ V +
Sbjct: 312 FTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRI 371
Query: 273 MMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKK 332
K D + +N+++ +KA + + M + + PN + +++N +
Sbjct: 372 CDD---KHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGL 428
Query: 333 VDEALNLLAEMDCKN-IIPDTVTYSSLIDGLCKSG 366
V+E L M ++ I+PD Y+ LID L ++G
Sbjct: 429 VEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAG 463
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 183/422 (43%), Gaps = 81/422 (19%)
Query: 24 IFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGIS-PDIFTLTILINCY 82
+F R+ P+P +N ++ + +S+ ++ TG++ PD +T +++
Sbjct: 65 VFERV----PSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVC 120
Query: 83 CNQAQITSAFSVLAKILKRGYRPDTITFTTLMK--GLCLN--------GQV--QTALQFH 130
N Q+ SV +L+ G+ D + T+ + G C + G++ + A+ +
Sbjct: 121 SNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWT 180
Query: 131 DHVVA--QGFRLDQV-------------TYRILINGLCKMGQTRAALQLMRQIQGQLVKP 175
VVA + L++ ++ L++GL K G A +L ++ K
Sbjct: 181 ALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMP----KR 236
Query: 176 DVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLL 235
D+ YT +I + K + A +L+ E AR V DV ++ALI G+ Q EA K+
Sbjct: 237 DIISYTSMIDGYAKGGDMVSARDLFEE--ARGV--DVRAWSALILGYAQNGQPNEAFKVF 292
Query: 236 DEMVTKNIHPDA------------------------------------YTFNILVDALGK 259
EM KN+ PD Y L+D K
Sbjct: 293 SEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAK 352
Query: 260 EGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHS 319
G++ A + M ++ D+++Y S+M+G + ++A +F M GI P+ +
Sbjct: 353 CGHMDRAAKLFEEMPQR----DLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVA 408
Query: 320 YSIMINGLCKTKKVDEALNLLAEMDCK-NIIPDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
+++++ +++ V+E L M K +I+ YS +++ L ++G++ A+EL+ +
Sbjct: 409 FTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSM 468
Query: 379 IF 380
F
Sbjct: 469 PF 470
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 128/276 (46%), Gaps = 16/276 (5%)
Query: 98 ILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQ 157
IL+ G+ PD+ TF +L+ + V + H + G DQV + N L M
Sbjct: 109 ILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG--CDQVL--PVQNSLMHMYT 164
Query: 158 TRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPD--VFTY 215
AL L +++ ++ K D+ + II ++ V A+ L+ EM PD + ++
Sbjct: 165 CCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEM------PDKNIISW 218
Query: 216 NALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMK 275
N +I + + + L EMV + T +L++A G+ +KE ++V A +++
Sbjct: 219 NIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIR 278
Query: 276 QGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDE 335
+ ++ +L+D Y EV A+ IF+S+ R N ++++MI C + +
Sbjct: 279 TFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIR----NKVTWNVMILAHCLHGRPEG 334
Query: 336 ALNLLAEMDCKNIIPDTVTYSSLIDGLCKSGRVSHA 371
L L M + PD VT+ ++ G ++G VS
Sbjct: 335 GLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQG 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 4/153 (2%)
Query: 207 RVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEA 266
R + ++ N + + + S K+A +++ PD+YTF L+ + K V
Sbjct: 78 RSIGKLYCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSG 137
Query: 267 KTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMING 326
K +K G + NSLM Y ++ AK +F +P+R I S++ +I G
Sbjct: 138 KMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIV----SWNSIIAG 193
Query: 327 LCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLI 359
+ + V A L EM KNII + S+ +
Sbjct: 194 MVRNGDVLAAHKLFDEMPDKNIISWNIMISAYL 226
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 133/299 (44%), Gaps = 21/299 (7%)
Query: 15 IRNADDAVSIFNRLLRMSPTPPIIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFT 74
+RN D V ++L P II +N ++++ + + +ISL ++ G + T
Sbjct: 195 VRNGD--VLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNEST 252
Query: 75 LTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTL--MKGLCLNGQVQTALQFHDH 132
L +L+N A++ SV A +++ + T L M G C +V A + D
Sbjct: 253 LVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKC--KEVGLARRIFDS 310
Query: 133 VVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKL 192
+ + ++VT+ ++I C G+ L+L + +++PD + ++ + L
Sbjct: 311 LSIR----NKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGL 366
Query: 193 VSDAYNLYSEMLAR-RVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFN 251
VS + YS M+ ++ P+ + + +EA + L + +++ P++ +
Sbjct: 367 VSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWA 426
Query: 252 ILVDALGKEGNVKEAKTVLAVMMKQGVKPDIIT---YNSLMDGYCLVS---EVNKAKDI 304
L+ + GN T+ + K ++ D + Y+ LM+ Y + +VN+ +++
Sbjct: 427 NLLSSSRFTGN----PTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREM 481
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 127/282 (45%), Gaps = 4/282 (1%)
Query: 63 LDFTGISPDIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQ 122
LD + I + LI+ + + I +L K+ + G PD +T T L+ +G
Sbjct: 375 LDEKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGN 434
Query: 123 VQTALQFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTI 182
+ A + +++ + G R D+ Y +I G G+ + +LM+++Q + +K E+Y
Sbjct: 435 FERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMA 494
Query: 183 IIHSFCKDKLVSDAYNLYSEMLARRVLPDVF-TYNALIYGFCIVSQLKEATKLLDEMVTK 241
++ ++ + + A + S M P F Y+ + + Q+ +A DEM
Sbjct: 495 LLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKL 554
Query: 242 NIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKA 301
PD LV A E ++ +A +L + K G++ +ITY L+D + + +A
Sbjct: 555 GHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEA 614
Query: 302 KDIFNSMPQRGIAPNVH---SYSIMINGLCKTKKVDEALNLL 340
+ + + Q G AP S M +G+ KK +AL +L
Sbjct: 615 EQLLVKISQLGEAPPFELQVSLCCMYSGVRNEKKTLQALGVL 656
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 128/320 (40%), Gaps = 11/320 (3%)
Query: 37 IIEFNKILTSLVKMKHYPTAISLSHQLDFTGISPDIFTLTILINCYCNQAQITSAFSVLA 96
I +++K++ K H + ++ GI PDI T T L++ Y A
Sbjct: 384 ISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFE 443
Query: 97 KILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILINGLCKMG 156
+ G RPD + ++ G G+ + + + A+ + + Y L+ +MG
Sbjct: 444 NLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMG 503
Query: 157 QTRAALQLMRQIQGQLVKP-DVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTY 215
A + +Q P E Y++ + ++ K V A + + EM PD
Sbjct: 504 DANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCI 563
Query: 216 NALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMK 275
L+ + + L +A +LL ++ I T+ +LVD + G ++EA+ +L + +
Sbjct: 564 ANLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQ 623
Query: 276 QGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSM-----PQRGIAPNVHSYSIMINGLCKT 330
G P SL C+ S V K ++ + + PN + +I+ L +
Sbjct: 624 LGEAPPFELQVSLC---CMYSGVRNEKKTLQALGVLEAKRDQMGPN--EFDKVISALKRG 678
Query: 331 KKVDEALNLLAEMDCKNIIP 350
+A + M+ + +P
Sbjct: 679 GFEKDARRMYKYMEARKFLP 698
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 116/273 (42%), Gaps = 3/273 (1%)
Query: 105 PDTITFTTLMKGLCLNGQVQTALQFHDHVV-AQGFRLDQVTYRILINGLCKMGQTRAALQ 163
P+ + + L+ L G L+ + V+ + F Y LI+ K +
Sbjct: 347 PNRVDWIALINQL-REGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKENHIEDVER 405
Query: 164 LMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFC 223
+++++ + PD+ T ++H + K A + + + + PD Y A+I G+
Sbjct: 406 ILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYV 465
Query: 224 IVSQLKEATKLLDEMVTKNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKP-DI 282
+ K +L+ EM K + + L+ A + G+ A + + M P
Sbjct: 466 NAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSF 525
Query: 283 ITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAE 342
Y+ ++ Y +V+KAK F+ M + G P+ + ++ +D+AL LL +
Sbjct: 526 EAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQ 585
Query: 343 MDCKNIIPDTVTYSSLIDGLCKSGRVSHAWELV 375
++ I +TY+ L+D + G + A +L+
Sbjct: 586 LEKDGIEIGVITYTVLVDWMANLGLIEEAEQLL 618
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 152/351 (43%), Gaps = 27/351 (7%)
Query: 38 IEFNKIL-TSLVKMKHYPTAISLSHQLDFTGISP--DIFTLTILINCYCNQAQIT----- 89
+EF+ ++ T+L+ M Y SL + + P ++ T +I+ + +IT
Sbjct: 283 MEFDIVVRTALLDM--YAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASS 340
Query: 90 SAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLDQVTYRILI 149
AF + + +RG P TF+ ++K ++ Q H + F+ D+ LI
Sbjct: 341 EAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALI 400
Query: 150 NGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSFCKDKLVSDAYNLYSEMLARRVL 209
MG T +Q K D+ +T +I +++ + A++L+ ++ + +
Sbjct: 401 ELYALMGSTEDGMQCFASTS----KQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIR 456
Query: 210 PDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTF--NILVDALGKEGNVKEAK 267
P+ +T + ++ + L ++ + I DA+T + K GN+ A
Sbjct: 457 PEEYTVSLMMSACADFAALSSGEQIQGYAIKSGI--DAFTSVKTSSISMYAKSGNMPLAN 514
Query: 268 TVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAPNVHSYSIMINGL 327
V + PD+ TY++++ N+A +IF SM GI PN ++ ++
Sbjct: 515 QVFIEVQN----PDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIAC 570
Query: 328 CKTKKVDEALNLLAEMDCKN---IIPDTVTYSSLIDGLCKSGRVSHAWELV 375
C V + L M KN I P+ ++ L+D L ++GR+S A L+
Sbjct: 571 CHGGLVTQGLKYFQCM--KNDYRINPNEKHFTCLVDLLGRTGRLSDAENLI 619
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/348 (20%), Positives = 143/348 (41%), Gaps = 49/348 (14%)
Query: 71 DIFTLTILINCYCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLN---GQVQTAL 127
D + LI+ Y ++LAK+ + G T +++K C+N G ++ +
Sbjct: 213 DQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGM 272
Query: 128 QFHDHVVAQGFRLDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHSF 187
H + G D V L++ K G + A++L + + +V Y +I F
Sbjct: 273 AIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSK----NVVTYNAMISGF 328
Query: 188 CK-----DKLVSDAYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKN 242
+ D+ S+A+ L+ +M R + P T++ ++ C ++ E + + ++ KN
Sbjct: 329 LQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKA-CSAAKTLEYGRQIHALICKN 387
Query: 243 -IHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKA 301
D + + L++ G+ ++ A KQ DI ++ S++D + ++ A
Sbjct: 388 NFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQ----DIASWTSMIDCHVQNEQLESA 443
Query: 302 KDIFNSMPQRGIAPNVHSYSIM---------------INGLCKTKKVD-------EALNL 339
D+F + I P ++ S+M I G +D ++++
Sbjct: 444 FDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISM 503
Query: 340 LAE---MDCKNII------PDTVTYSSLIDGLCKSGRVSHAWELVDDV 378
A+ M N + PD TYS++I L + G + A + + +
Sbjct: 504 YAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESM 551
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 131/307 (42%), Gaps = 33/307 (10%)
Query: 82 YCNQAQITSAFSVLAKILKRGYRPDTITFTTLMKGLCLNGQVQTALQFHDHVVAQGFRLD 141
YC ++ A + ++ +R + I+F +L+ G G + A++ +LD
Sbjct: 92 YCKCRELGFARQLFDRMPER----NIISFNSLISGYTQMGFYEQAMELFLEAREANLKLD 147
Query: 142 QVTYRILINGLCKMGQTRAALQLMRQIQGQLV----KPDVEMYTIIIHSFCKDKLVSDAY 197
+ TY + G C R L L + G +V V + ++I + K + A
Sbjct: 148 KFTYAGAL-GFCG---ERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAM 203
Query: 198 NLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVDAL 257
+L+ R D ++N+LI G+ V +E LL +M ++ Y ++ A
Sbjct: 204 SLFDRCDER----DQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKAC 259
Query: 258 G---KEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIA 314
EG +++ + K G++ DI+ +L+D Y + +A +F+ MP +
Sbjct: 260 CINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSK--- 316
Query: 315 PNVHSYSIMINGLCKTKKV-----DEALNLLAEMDCKNIIPDTVTYSSLIDGLCKS---- 365
NV +Y+ MI+G + ++ EA L +M + + P T+S ++ +
Sbjct: 317 -NVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLE 375
Query: 366 -GRVSHA 371
GR HA
Sbjct: 376 YGRQIHA 382
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 140 LDQVTYRILINGLCKMGQTRAALQLMRQIQGQLVKPDVEMYTIIIHS----FCKDKLVSD 195
LD Y+IL K G ++ L + G ++K + ++++ +CK + +
Sbjct: 45 LDSEGYKILFQTAAKSG----SVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGF 100
Query: 196 AYNLYSEMLARRVLPDVFTYNALIYGFCIVSQLKEATKLLDEMVTKNIHPDAYTFNILVD 255
A L+ M R ++ ++N+LI G+ + ++A +L E N+ D +T+ +
Sbjct: 101 ARQLFDRMPERNII----SFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALG 156
Query: 256 ALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNKAKDIFNSMPQRGIAP 315
G+ ++ + + +++ G+ + N L+D Y ++++A +F+ +R
Sbjct: 157 FCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDER---- 212
Query: 316 NVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLIDGLC 363
+ S++ +I+G + +E LNLLA+M + T S++ C
Sbjct: 213 DQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACC 260
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 15/168 (8%)
Query: 241 KNIHPDAYTFNILVDALGKEGNVKEAKTVLAVMMKQGVKPDIITYNSLMDGYCLVSEVNK 300
KN D+ + IL K G+V K M+K + P + N+L++ YC E+
Sbjct: 41 KNTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGF 100
Query: 301 AKDIFNSMPQRGIAPNVHSYSIMINGLCKTKKVDEALNLLAEMDCKNIIPDTVTYSSLID 360
A+ +F+ MP+R N+ S++ +I+G + ++A+ L E N+ D TY+ +
Sbjct: 101 ARQLFDRMPER----NIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGAL- 155
Query: 361 GLCKS------GRVSHAWELVDDV---IFIFNVWMS-YAKAIKLTRQL 398
G C G + H +V+ + +F+ NV + Y+K KL + +
Sbjct: 156 GFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAM 203