Miyakogusa Predicted Gene
- Lj5g3v2110830.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2110830.1 tr|Q93Z42|Q93Z42_ARATH AT5g19750/T29J13_170
OS=Arabidopsis thaliana GN=At5g19750 PE=2 SV=1,28.41,6e-19,SUBFAMILY
NOT NAMED,NULL; PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2
(MPV17),Mpv17/PMP22; Mpv17_PMP22,Mpv,CUFF.56670.1
(257 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G33905.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 298 3e-81
AT2G14860.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 294 5e-80
AT5G43140.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 227 5e-60
AT5G19750.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 98 6e-21
AT1G52870.2 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 84 7e-17
AT4G03410.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 79 3e-15
AT4G03410.2 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 79 4e-15
AT2G42770.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 74 1e-13
AT3G24570.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 69 3e-12
AT4G14305.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 61 7e-10
AT1G52870.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 60 1e-09
AT4G04470.1 | Symbols: PMP22 | Peroxisomal membrane 22 kDa (Mpv1... 58 6e-09
AT3G24570.2 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 56 3e-08
>AT4G33905.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr4:16254065-16255592 REVERSE
LENGTH=261
Length = 261
Score = 298 bits (762), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 143/232 (61%), Positives = 168/232 (72%), Gaps = 12/232 (5%)
Query: 24 KVQSKPYFRLPHFLRKPREYQVXXXXXXXXXXXXXXXXXXXXXXXXXXXKVGFVGWYLGM 83
++QS+P++R P FL K +E V GF+GWYLGM
Sbjct: 42 RLQSRPFYRTPQFLGKAKETGVSGFCSSSSSSSSTVS------------TAGFIGWYLGM 89
Query: 84 IKARPILTKSVTSALIYTAADLSSQAIVRQSSEPFDFVRTLRMAGYGMIILGPTLHFWFN 143
+K+RP+LTKSVTS+LIY AADLSSQ I + S + +D VRT RM GYG++ILGPTLH+WFN
Sbjct: 90 VKSRPVLTKSVTSSLIYIAADLSSQTIPQASVDSYDLVRTARMGGYGLLILGPTLHYWFN 149
Query: 144 FMSKLFPRTDLFSTLMKMVMGQTLYGPAMTVIFFSFNAHLQGETGTEIVARLKRDLLPTF 203
MS LFP+ DL +T KM MGQT+YGPAM V+FFS NA LQGE G+EIVARLKRDLLPT
Sbjct: 150 LMSSLFPKRDLITTFKKMAMGQTVYGPAMNVVFFSLNAALQGENGSEIVARLKRDLLPTM 209
Query: 204 LSGVMYWPLCDFITFRFIPVHLQPLVSNSFSYLWTIYITYMASLEKAEIAEI 255
L+GVMYWPLCDFITF+F PV+LQPLVSNSFSYLWTIYITYMAS EI
Sbjct: 210 LNGVMYWPLCDFITFKFCPVYLQPLVSNSFSYLWTIYITYMASRATPTAIEI 261
>AT2G14860.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr2:6387820-6389563 REVERSE LENGTH=252
Length = 252
Score = 294 bits (752), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 139/225 (61%), Positives = 164/225 (72%), Gaps = 12/225 (5%)
Query: 25 VQSKPYFRLPHFLRKPREYQVXXXXXXXXXXXXXXXXXXXXXXXXXXXKVGFVGWYLGMI 84
QS+PYFR L + +E V ++GFVGWYLGM+
Sbjct: 34 AQSRPYFRSRQLLERAKETGVSPSPSLGFSSSSSPS------------RIGFVGWYLGMV 81
Query: 85 KARPILTKSVTSALIYTAADLSSQAIVRQSSEPFDFVRTLRMAGYGMIILGPTLHFWFNF 144
K+ P++TKSVTS+LIY AADLSSQ I + SSE +D VRT RM GYG+ +LGPTLH+WFNF
Sbjct: 82 KSHPVVTKSVTSSLIYIAADLSSQTIAKTSSESYDLVRTARMGGYGLFVLGPTLHYWFNF 141
Query: 145 MSKLFPRTDLFSTLMKMVMGQTLYGPAMTVIFFSFNAHLQGETGTEIVARLKRDLLPTFL 204
MS+LFP+ DL +T KM MGQT+YGP MTVIFFS NA LQGE G+ I+ARLKRDLLP
Sbjct: 142 MSRLFPKQDLITTFKKMAMGQTIYGPIMTVIFFSLNASLQGERGSVILARLKRDLLPALF 201
Query: 205 SGVMYWPLCDFITFRFIPVHLQPLVSNSFSYLWTIYITYMASLEK 249
+GVMYWPLCDFITFRF PVHLQPLVSNSFSY+WTIY+TYMA+ EK
Sbjct: 202 NGVMYWPLCDFITFRFFPVHLQPLVSNSFSYVWTIYMTYMANREK 246
>AT5G43140.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr5:17321570-17323224 FORWARD
LENGTH=254
Length = 254
Score = 227 bits (579), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 95/177 (53%), Positives = 139/177 (78%)
Query: 75 GFVGWYLGMIKARPILTKSVTSALIYTAADLSSQAIVRQSSEPFDFVRTLRMAGYGMIIL 134
F+ WYL +++ P +TKS+T+++IY AADL+SQ I + + FD +RT RMA +G+I L
Sbjct: 77 AFLRWYLRKLESHPFMTKSITTSVIYMAADLTSQMITMEPTGSFDLIRTARMASFGLIFL 136
Query: 135 GPTLHFWFNFMSKLFPRTDLFSTLMKMVMGQTLYGPAMTVIFFSFNAHLQGETGTEIVAR 194
GP+ H WF+++SK+ P+ D+ +T K++MGQ L+GP +F+S+NA LQGE EIVAR
Sbjct: 137 GPSQHLWFSYLSKILPKRDVLTTFKKIMMGQVLFGPVSNTVFYSYNAALQGENSEEIVAR 196
Query: 195 LKRDLLPTFLSGVMYWPLCDFITFRFIPVHLQPLVSNSFSYLWTIYITYMASLEKAE 251
LKRDLLPT +G+MYWP+CDF+TF+++PVHLQPL+++S +Y+WTIY+TYMA+ KA+
Sbjct: 197 LKRDLLPTLKNGLMYWPVCDFVTFKYVPVHLQPLMNSSCAYIWTIYLTYMANQTKAD 253
>AT5G19750.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr5:6677124-6679127 FORWARD LENGTH=288
Length = 288
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 96/176 (54%), Gaps = 2/176 (1%)
Query: 73 KVGFVGWYLGMIKARPILTKSVTSALIYTAADLSSQAIVRQSSEPFDFVRTLRMAGYGMI 132
K + WY ++ P+LTK+VT+AL+ DL Q + ++S D RTL G+
Sbjct: 111 KWSLLSWYQALLSNSPVLTKAVTAALLNLVGDLICQLTINKTSS-LDKKRTLTFTFLGLG 169
Query: 133 ILGPTLHFWFNFMSKLFPRTDLFSTLMKMVMGQTLYGPAMTVIFFSFNAHLQGETGTEIV 192
++GPTLHFW+ ++SK+ + L ++++++ Q ++ P +F S L+G+ + ++
Sbjct: 170 LVGPTLHFWYLYLSKVVTASGLSGAVIRLLLDQFVFAPIFVGVFLSAVVTLEGKP-SNVI 228
Query: 193 ARLKRDLLPTFLSGVMYWPLCDFITFRFIPVHLQPLVSNSFSYLWTIYITYMASLE 248
+L+++ ++ W F+ FRF+P + Q L SN + W + +++ A E
Sbjct: 229 PKLQQEWTGAMIANWQLWIPFQFLNFRFVPQNYQVLASNVVALAWNVILSFKAHKE 284
>AT1G52870.2 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr1:19685856-19687678 FORWARD
LENGTH=366
Length = 366
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 1/176 (0%)
Query: 80 YLGMIKARPILTKSVTSALIYTAADLSSQAIVRQSSEPFDFVRTLRMAGYGMIILGPTLH 139
Y +K P+L K V S ++Y+ D +Q + D RTLR G + G H
Sbjct: 173 YEEALKQNPVLAKMVISGVVYSVGDWIAQCYEGKPLFEIDRARTLRSGLVGFTLHGSLSH 232
Query: 140 FWFNFMSKLFPRTDLFSTLMKMVMGQTLYGPAMTVIFFSFNAHLQGETGTEIVARLKRDL 199
F++ F +LFP D + +K+ QT++ I+F+ L+ E+ I LK
Sbjct: 233 FYYQFCEELFPFQDWWVVPVKVAFDQTVWSAIWNSIYFTVLGFLRFESPISIFKELKATF 292
Query: 200 LPTFLSGVMYWPLCDFITFRFIPVHLQPLVSNSFSYLW-TIYITYMASLEKAEIAE 254
LP +G WP IT+ +PV + L + +W TI TY +A I+E
Sbjct: 293 LPMLTAGWKLWPFAHLITYGLVPVEQRLLWVDCVELIWVTILSTYSNEKSEARISE 348
>AT4G03410.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr4:1501907-1503486 FORWARD LENGTH=317
Length = 317
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 3/173 (1%)
Query: 80 YLGMIKARPILTKSVTSALIYTAADLSSQAIVRQSSEPFDFVRTLRMAGYGMIILGPTLH 139
Y ++K P+L K S ++Y+ D +Q + FD R LR G + G H
Sbjct: 131 YEQILKTNPVLAKMAISGIVYSLGDWIAQCYEGKPLFEFDRTRVLRSGLVGFTLHGSLSH 190
Query: 140 FWFNFMSKLFPRTDLFSTLMKMVMGQTLYGPAMTVIFFSFNAHLQGETGTEIVARLKRDL 199
+++ F LFP + + K+ QT++ I+F+ L+ ++ +I + +K
Sbjct: 191 YYYQFCEALFPFQEWWVVPAKVAFDQTVWSAIWNSIYFTVLGLLRFQSPADIFSEIKTTF 250
Query: 200 LPTFLSGVMYWPLCDFITFRFIPVHLQPLVSNSFSYLW-TIYITYMASLEKAE 251
LP +G WPL +T+ IPV + L + +W TI TY S EKAE
Sbjct: 251 LPMLTAGWKLWPLAHLVTYGVIPVDQRLLWVDCIELIWVTILSTY--SNEKAE 301
>AT4G03410.2 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr4:1501907-1503503 FORWARD LENGTH=361
Length = 361
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 3/173 (1%)
Query: 80 YLGMIKARPILTKSVTSALIYTAADLSSQAIVRQSSEPFDFVRTLRMAGYGMIILGPTLH 139
Y ++K P+L K S ++Y+ D +Q + FD R LR G + G H
Sbjct: 131 YEQILKTNPVLAKMAISGIVYSLGDWIAQCYEGKPLFEFDRTRVLRSGLVGFTLHGSLSH 190
Query: 140 FWFNFMSKLFPRTDLFSTLMKMVMGQTLYGPAMTVIFFSFNAHLQGETGTEIVARLKRDL 199
+++ F LFP + + K+ QT++ I+F+ L+ ++ +I + +K
Sbjct: 191 YYYQFCEALFPFQEWWVVPAKVAFDQTVWSAIWNSIYFTVLGLLRFQSPADIFSEIKTTF 250
Query: 200 LPTFLSGVMYWPLCDFITFRFIPVHLQPLVSNSFSYLW-TIYITYMASLEKAE 251
LP +G WPL +T+ IPV + L + +W TI TY S EKAE
Sbjct: 251 LPMLTAGWKLWPLAHLVTYGVIPVDQRLLWVDCIELIWVTILSTY--SNEKAE 301
>AT2G42770.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr2:17798635-17799927 REVERSE
LENGTH=232
Length = 232
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 78/147 (53%), Gaps = 2/147 (1%)
Query: 96 SALIYTAADLSSQAIVRQSSEPFDFVRTLRMAGYGMIILGPTLHFWFNFMSKLFPRTDLF 155
+AL ++++L + SE D++R LRM+ YG ++ GP + W+ F+ P+
Sbjct: 83 TALKQSSSELDEGELWNIFSE-HDWIRALRMSSYGFLLYGPGSYAWYQFLDHSLPKPTAT 141
Query: 156 STLMKMVMGQTLYGPAMTVIFFSFNAHLQGETGTEIVARLKRDLLPTFLSGVMYWPLCDF 215
+ ++K+++ Q + GP++ + F++N G+ +E+ + ++D LPT L G +W
Sbjct: 142 NLVLKVLLNQVILGPSVIAVIFAWNNLWLGKL-SELGNKYQKDALPTLLYGFRFWVPVSI 200
Query: 216 ITFRFIPVHLQPLVSNSFSYLWTIYIT 242
+ F +P+ + + S W Y++
Sbjct: 201 LNFWVVPLQARVAFMSMGSVFWNFYLS 227
>AT3G24570.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr3:8966675-8968530 REVERSE LENGTH=235
Length = 235
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 86/208 (41%), Gaps = 37/208 (17%)
Query: 79 WYLGMIKARPILTKSVTSALIYTAADLSSQAIV--------------------------- 111
WY + P+ T+ ++S ++ D+++Q I
Sbjct: 7 WYQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKRRLLRLTETNKDADADAEIKVK 66
Query: 112 -RQSSE-PFDFVRTLRMAGYGMIILGPTLHFWFNFMSKLF-------PRTDLFSTLMKMV 162
+Q +E ++ R + +G +GP HFW+ + K P++ F K+
Sbjct: 67 WKQDAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTRF-VAAKVA 125
Query: 163 MGQTLYGPAMTVIFFSFNAHLQGETGTEIVARLKRDLLPTFLSGVMYWPLCDFITFRFIP 222
M ++GP ++FF++ G+ E+ LKRD LP WPL FR++P
Sbjct: 126 MDGLIFGPVDLLVFFTYMGFATGKNTAEVKEGLKRDFLPALALEGGAWPLLQIANFRYVP 185
Query: 223 VHLQPLVSNSFSYLWTIYITYMASLEKA 250
V Q L N F + + +++++ + A
Sbjct: 186 VQYQLLYVNIFCLVDSAFLSWVEQQKDA 213
>AT4G14305.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr4:8235335-8236605 REVERSE LENGTH=185
Length = 185
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 81/168 (48%), Gaps = 4/168 (2%)
Query: 80 YLGMIKARPILTKSVTSALIYTAADLSSQAIVRQSSEPFDFVRTLRMAGYGMIILGPTLH 139
YL ++A P+ TK++T+ ++ +D +Q I + F R L + YG GP H
Sbjct: 12 YLIQLQAHPLRTKAITAGVLAGCSDAIAQKI--SGVKRIQFRRLLLLMLYGFAYGGPFGH 69
Query: 140 FWFNFMSKLFPRTDLFSTLMKMVMGQTL-YGPAMTVIFFSF-NAHLQGETGTEIVARLKR 197
F+ M +F ST+ K V+ + L P +F S+ ++G + +L +
Sbjct: 70 FFHKLMDTIFKGKKGNSTVAKKVLLEQLTSSPWNNFLFMSYYGLVVEGRPWKLVKHKLGK 129
Query: 198 DLLPTFLSGVMYWPLCDFITFRFIPVHLQPLVSNSFSYLWTIYITYMA 245
D L+ +WP+ ++ ++++P+ + L S+ + W+I++ A
Sbjct: 130 DYPTIQLTAWKFWPIVGWVNYQYVPLQFRVLFSSFVASCWSIFLNLKA 177
>AT1G52870.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr1:19685856-19687310 FORWARD
LENGTH=306
Length = 306
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 57/127 (44%)
Query: 80 YLGMIKARPILTKSVTSALIYTAADLSSQAIVRQSSEPFDFVRTLRMAGYGMIILGPTLH 139
Y +K P+L K V S ++Y+ D +Q + D RTLR G + G H
Sbjct: 173 YEEALKQNPVLAKMVISGVVYSVGDWIAQCYEGKPLFEIDRARTLRSGLVGFTLHGSLSH 232
Query: 140 FWFNFMSKLFPRTDLFSTLMKMVMGQTLYGPAMTVIFFSFNAHLQGETGTEIVARLKRDL 199
F++ F +LFP D + +K+ QT++ I+F+ L+ E+ I LK
Sbjct: 233 FYYQFCEELFPFQDWWVVPVKVAFDQTVWSAIWNSIYFTVLGFLRFESPISIFKELKATF 292
Query: 200 LPTFLSG 206
LP G
Sbjct: 293 LPMLTVG 299
>AT4G04470.1 | Symbols: PMP22 | Peroxisomal membrane 22 kDa
(Mpv17/PMP22) family protein | chr4:2227963-2229226
REVERSE LENGTH=190
Length = 190
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 82/168 (48%), Gaps = 4/168 (2%)
Query: 80 YLGMIKARPILTKSVTSALIYTAADLSSQAIVRQSSEPFDFVRTLRMAGYGMIILGPTLH 139
YL ++ P+ TK++T+ ++ +D+ SQ + + R L + LGP H
Sbjct: 14 YLSQLQQHPLRTKAITAGVLSGVSDVVSQKL--SGIQKIQLRRVLLKVIFAGGFLGPAGH 71
Query: 140 FWFNFMSKLFP-RTDLFSTLMKMVMGQTLYGPAMTVIF-FSFNAHLQGETGTEIVARLKR 197
F+ ++ K F + D + K+++ Q P ++F + ++ T + R+K+
Sbjct: 72 FFHTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIERTPWTLVRERIKK 131
Query: 198 DLLPTFLSGVMYWPLCDFITFRFIPVHLQPLVSNSFSYLWTIYITYMA 245
L+ ++P+ +I ++++P+H + ++ + ++ W I++T A
Sbjct: 132 TYPTVQLTAWTFFPVVGWINYKYVPLHFRVILHSLVAFFWGIFLTLRA 179
>AT3G24570.2 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr3:8966675-8968530 REVERSE LENGTH=222
Length = 222
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 81/198 (40%), Gaps = 30/198 (15%)
Query: 79 WYLGMIKARPILTKSVTSALIYTAADLSSQAIVRQSSEPFDFVRTLRMAGYGM------- 131
WY + P+ T+ ++S ++ D+++Q I +++ R LR+
Sbjct: 7 WYQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKR----RLLRLTETNKDADADAE 62
Query: 132 --IILGPTLHFWFNF----MSKLFPRTDLFSTL-------------MKMVMGQTLYGPAM 172
+ F N+ ++ ++ D F L K+ M ++GP
Sbjct: 63 IKVKWKQDAEFKVNWKRVAITSMYEGLDKFIKLKLRYVPKSTRFVAAKVAMDGLIFGPVD 122
Query: 173 TVIFFSFNAHLQGETGTEIVARLKRDLLPTFLSGVMYWPLCDFITFRFIPVHLQPLVSNS 232
++FF++ G+ E+ LKRD LP WPL FR++PV Q L N
Sbjct: 123 LLVFFTYMGFATGKNTAEVKEGLKRDFLPALALEGGAWPLLQIANFRYVPVQYQLLYVNI 182
Query: 233 FSYLWTIYITYMASLEKA 250
F + + +++++ + A
Sbjct: 183 FCLVDSAFLSWVEQQKDA 200