Miyakogusa Predicted Gene
- Lj5g3v2099550.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2099550.1 Non Chatacterized Hit- tr|I1NG27|I1NG27_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,90.7,0.00000000000002,FAMILY NOT NAMED,NULL; HLH,
helix-loop-helix DNA-binding domain,Helix-loop-helix domain; seg,NULL;
H,CUFF.56652.1
(316 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G14760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 177 6e-45
AT4G33880.1 | Symbols: RSL2 | ROOT HAIR DEFECTIVE 6-LIKE 2 | chr... 171 5e-43
AT2G14760.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 168 4e-42
AT1G27740.1 | Symbols: RSL4 | root hair defective 6-like 4 | chr... 163 1e-40
AT5G43175.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 152 2e-37
AT1G66470.1 | Symbols: RHD6 | ROOT HAIR DEFECTIVE6 | chr1:247953... 99 4e-21
AT5G37800.1 | Symbols: RSL1, ATRSL1 | RHD SIX-LIKE 1 | chr5:1503... 99 5e-21
AT2G24260.1 | Symbols: LRL1 | LJRHL1-like 1 | chr2:10319646-1032... 92 5e-19
AT4G30980.1 | Symbols: LRL2 | LJRHL1-like 2 | chr4:15079489-1508... 92 6e-19
AT5G58010.1 | Symbols: LRL3 | LJRHL1-like 3 | chr5:23483670-2348... 88 9e-18
AT3G21330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 78 9e-15
AT5G01310.1 | Symbols: APTX | APRATAXIN-like | chr5:125304-12896... 77 2e-14
AT4G00120.1 | Symbols: IND1, GT140, IND, EDA33 | basic helix-loo... 74 1e-13
AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 70 3e-12
AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 70 3e-12
AT3G07340.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 69 6e-12
AT1G51140.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 68 1e-11
AT5G50915.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 67 1e-11
AT5G50915.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 67 1e-11
AT1G26260.3 | Symbols: CIB5 | cryptochrome-interacting basic-hel... 67 2e-11
AT1G73830.2 | Symbols: BEE3 | BR enhanced expression 3 | chr1:27... 66 3e-11
AT1G26260.2 | Symbols: CIB5 | cryptochrome-interacting basic-hel... 66 3e-11
AT1G26260.1 | Symbols: CIB5 | cryptochrome-interacting basic-hel... 66 3e-11
AT1G73830.1 | Symbols: BEE3 | BR enhanced expression 3 | chr1:27... 66 3e-11
AT2G20180.3 | Symbols: PIL5 | phytochrome interacting factor 3-l... 66 4e-11
AT2G20180.2 | Symbols: PIL5 | phytochrome interacting factor 3-l... 66 4e-11
AT2G20180.1 | Symbols: PIL5, PIF1 | phytochrome interacting fact... 66 4e-11
AT1G59640.1 | Symbols: ZCW32, BPE, BPEub | BIG PETAL P | chr1:21... 66 4e-11
AT4G34530.1 | Symbols: CIB1 | cryptochrome-interacting basic-hel... 65 4e-11
AT4G09180.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 65 4e-11
AT5G48560.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 65 5e-11
AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH) DNA-b... 65 5e-11
AT1G25330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 65 5e-11
AT5G09750.1 | Symbols: HEC3 | basic helix-loop-helix (bHLH) DNA-... 65 6e-11
AT1G35460.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 65 7e-11
AT1G59640.2 | Symbols: ZCW32, BPE, BPEp | BIG PETAL P | chr1:219... 65 8e-11
AT1G18400.1 | Symbols: BEE1 | BR enhanced expression 1 | chr1:63... 64 1e-10
AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH) DNA... 64 1e-10
AT4G28790.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 64 1e-10
AT1G68920.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 64 2e-10
AT1G68920.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 64 2e-10
AT1G68920.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 64 2e-10
AT2G46970.1 | Symbols: PIL1 | phytochrome interacting factor 3-l... 64 2e-10
AT2G42280.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 63 2e-10
AT3G23690.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 63 3e-10
AT2G18300.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 62 4e-10
AT2G18300.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 62 5e-10
AT2G18300.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 62 5e-10
AT4G02590.2 | Symbols: UNE12 | basic helix-loop-helix (bHLH) DNA... 62 5e-10
AT4G02590.1 | Symbols: UNE12 | basic helix-loop-helix (bHLH) DNA... 62 5e-10
AT1G05805.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 62 5e-10
AT1G10120.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 62 6e-10
AT4G02590.3 | Symbols: UNE12 | basic helix-loop-helix (bHLH) DNA... 62 6e-10
AT1G03040.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 62 7e-10
AT1G03040.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 62 7e-10
AT3G57800.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 61 8e-10
AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH) DNA-b... 61 9e-10
AT2G42300.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 61 1e-09
AT4G28815.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 60 1e-09
AT5G62610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 60 2e-09
AT4G36540.2 | Symbols: BEE2 | BR enhanced expression 2 | chr4:17... 59 4e-09
AT4G36540.1 | Symbols: BEE2 | BR enhanced expression 2 | chr4:17... 59 4e-09
AT4G28790.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 59 6e-09
AT2G43140.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 58 9e-09
AT2G43140.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 58 1e-08
AT3G50330.1 | Symbols: HEC2 | basic helix-loop-helix (bHLH) DNA-... 57 1e-08
AT5G67060.1 | Symbols: HEC1 | basic helix-loop-helix (bHLH) DNA-... 57 1e-08
AT4G28800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 56 4e-08
AT3G62090.1 | Symbols: PIL2, PIF6 | phytochrome interacting fact... 54 2e-07
AT3G62090.2 | Symbols: PIL2, PIF6 | phytochrome interacting fact... 54 2e-07
AT3G19500.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 4e-07
AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type tran... 51 1e-06
AT2G43010.2 | Symbols: PIF4, SRL2, AtPIF4 | phytochrome interact... 51 1e-06
AT2G43010.1 | Symbols: PIF4, SRL2, AtPIF4 | phytochrome interact... 51 1e-06
AT3G59060.4 | Symbols: PIL6, PIF5 | phytochrome interacting fact... 50 2e-06
AT3G59060.3 | Symbols: PIL6, PIF5 | phytochrome interacting fact... 50 2e-06
AT3G59060.2 | Symbols: PIL6, PIF5 | phytochrome interacting fact... 50 2e-06
AT3G59060.1 | Symbols: PIL6, PIF5 | phytochrome interacting fact... 50 2e-06
AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 50 3e-06
AT1G02340.1 | Symbols: HFR1, RSF1, FBI1, REP1 | basic helix-loop... 50 3e-06
AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 50 3e-06
AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 3e-06
AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH) DNA-b... 49 3e-06
AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29, ... 49 5e-06
AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 5e-06
AT2G31280.1 | Symbols: CPUORF7 | conserved peptide upstream open... 48 8e-06
AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 48 8e-06
AT2G31280.3 | Symbols: CPUORF7 | conserved peptide upstream open... 48 8e-06
AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 48 9e-06
AT2G31280.2 | Symbols: CPUORF7 | conserved peptide upstream open... 48 9e-06
AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 48 1e-05
>AT2G14760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:6321840-6323312 REVERSE
LENGTH=328
Length = 328
Score = 177 bits (450), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 80/98 (81%), Positives = 92/98 (93%)
Query: 213 KDSTTIKLKGKSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEA 272
+DS + L GK+R+ RG+ATDPQS+YAR+RRE+INERL+ILQ+LVPNGTKVDISTMLEEA
Sbjct: 226 EDSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEA 285
Query: 273 VQYVKFLQLQIKLLSSDDLWMYAPIAFNGMNIGLDLNL 310
VQYVKFLQLQIKLLSSDDLWMYAPIA+NGM+IGLDL L
Sbjct: 286 VQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLDLKL 323
>AT4G33880.1 | Symbols: RSL2 | ROOT HAIR DEFECTIVE 6-LIKE 2 |
chr4:16239566-16241052 REVERSE LENGTH=352
Length = 352
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 77/92 (83%), Positives = 86/92 (93%)
Query: 215 STTIKLKGKSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQ 274
S + L GK+R+ RG+ATDPQS+YAR+RRE+INERL+ILQNLVPNGTKVDISTMLEEAV
Sbjct: 257 SKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVH 316
Query: 275 YVKFLQLQIKLLSSDDLWMYAPIAFNGMNIGL 306
YVKFLQLQIKLLSSDDLWMYAPIAFNGM+IGL
Sbjct: 317 YVKFLQLQIKLLSSDDLWMYAPIAFNGMDIGL 348
>AT2G14760.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:6321840-6323312 REVERSE
LENGTH=341
Length = 341
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 80/111 (72%), Positives = 92/111 (82%), Gaps = 13/111 (11%)
Query: 213 KDSTTIKLKGKSRSERGSATDPQSIYAR-------------RRREKINERLKILQNLVPN 259
+DS + L GK+R+ RG+ATDPQS+YAR +RRE+INERL+ILQ+LVPN
Sbjct: 226 EDSKALNLNGKTRASRGAATDPQSLYARLKQLNKVHCMMVQKRRERINERLRILQHLVPN 285
Query: 260 GTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAFNGMNIGLDLNL 310
GTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIA+NGM+IGLDL L
Sbjct: 286 GTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLDLKL 336
>AT1G27740.1 | Symbols: RSL4 | root hair defective 6-like 4 |
chr1:9654753-9655806 FORWARD LENGTH=258
Length = 258
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 73/97 (75%), Positives = 87/97 (89%)
Query: 215 STTIKLKGKSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQ 274
++ +KGK+R+ +G+ATDPQS+YAR+RREKINERLK LQNLVPNGTKVDISTMLEEAV
Sbjct: 158 ASVTSVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVH 217
Query: 275 YVKFLQLQIKLLSSDDLWMYAPIAFNGMNIGLDLNLF 311
YVKFLQLQIKLLSSDDLWMYAP+A+NG+++G NL
Sbjct: 218 YVKFLQLQIKLLSSDDLWMYAPLAYNGLDMGFHHNLL 254
>AT5G43175.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:17334261-17335234 FORWARD
LENGTH=223
Length = 223
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/96 (72%), Positives = 85/96 (88%)
Query: 216 TTIKLKGKSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQY 275
T+ LK K+++ RG A+DPQS+YAR+RRE+IN+RLK LQ+LVPNGTKVDISTMLE+AV Y
Sbjct: 124 TSKSLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHY 183
Query: 276 VKFLQLQIKLLSSDDLWMYAPIAFNGMNIGLDLNLF 311
VKFLQLQIKLLSS+DLWMYAP+A NG+N+GL NL
Sbjct: 184 VKFLQLQIKLLSSEDLWMYAPLAHNGLNMGLHHNLL 219
>AT1G66470.1 | Symbols: RHD6 | ROOT HAIR DEFECTIVE6 |
chr1:24795326-24796598 FORWARD LENGTH=298
Length = 298
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 55/63 (87%)
Query: 230 SATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSD 289
S DPQS+ A+ RRE+I+ERLKILQ LVPNGTKVD+ TMLE+A+ YVKFLQ+Q+K+L++D
Sbjct: 201 SPKDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLATD 260
Query: 290 DLW 292
+ W
Sbjct: 261 EFW 263
>AT5G37800.1 | Symbols: RSL1, ATRSL1 | RHD SIX-LIKE 1 |
chr5:15036197-15037574 FORWARD LENGTH=307
Length = 307
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 62/77 (80%), Gaps = 3/77 (3%)
Query: 216 TTIKLKGKSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQY 275
T K+K K+ + S DPQS+ A+ RRE+I+ERLK+LQ LVPNGTKVD+ TMLE+A+ Y
Sbjct: 196 TNGKIKPKATT---SPKDPQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGY 252
Query: 276 VKFLQLQIKLLSSDDLW 292
VKFLQ+Q+K+L++D+ W
Sbjct: 253 VKFLQVQVKVLAADEFW 269
>AT2G24260.1 | Symbols: LRL1 | LJRHL1-like 1 |
chr2:10319646-10322177 REVERSE LENGTH=350
Length = 350
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 54/76 (71%)
Query: 223 KSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQ 282
K R+ RG ATDP SI R RRE+I ER+K LQ LVPNG K D ++ML+E + YVKFLQLQ
Sbjct: 137 KIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQ 196
Query: 283 IKLLSSDDLWMYAPIA 298
+K+LS L A ++
Sbjct: 197 VKVLSMSRLGGAASVS 212
>AT4G30980.1 | Symbols: LRL2 | LJRHL1-like 2 |
chr4:15079489-15081606 REVERSE LENGTH=310
Length = 310
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 52/71 (73%)
Query: 221 KGKSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQ 280
K K R+ RG ATDP SI R RRE+I ER+K LQ LVPNG K D ++ML+E + YVKFLQ
Sbjct: 127 KPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQ 186
Query: 281 LQIKLLSSDDL 291
LQ+K+LS L
Sbjct: 187 LQVKVLSMSRL 197
>AT5G58010.1 | Symbols: LRL3 | LJRHL1-like 3 |
chr5:23483670-23484889 REVERSE LENGTH=297
Length = 297
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 2/89 (2%)
Query: 217 TIKLKGKSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYV 276
++ K + R+ RG ATDP SI R RRE+I ER+K LQ LVPN K D ++ML+E ++YV
Sbjct: 92 VVRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYV 151
Query: 277 KFLQLQIKLLSSDDLWMYAPIA--FNGMN 303
+FLQLQ+K+LS L + NG++
Sbjct: 152 RFLQLQVKVLSMSRLGGAGSVGPRLNGLS 180
>AT3G21330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:7507720-7508841 FORWARD
LENGTH=373
Length = 373
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 48/56 (85%)
Query: 231 ATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 286
+TDPQ++ AR+RRE+I+E++++LQ LVP GTK+D ++ML+EA Y+KFL+ Q+K L
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKAL 331
>AT5G01310.1 | Symbols: APTX | APRATAXIN-like | chr5:125304-128960
FORWARD LENGTH=912
Length = 912
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 47/61 (77%)
Query: 223 KSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQ 282
+SRS +TDPQS+ AR RR +I++R KILQ++VP G K+D +ML+EA+ YVKFL+ Q
Sbjct: 36 RSRSTSTLSTDPQSVAARDRRHRISDRFKILQSMVPGGAKMDTVSMLDEAISYVKFLKAQ 95
Query: 283 I 283
I
Sbjct: 96 I 96
>AT4G00120.1 | Symbols: IND1, GT140, IND, EDA33 | basic
helix-loop-helix (bHLH) DNA-binding superfamily protein
| chr4:42601-43197 REVERSE LENGTH=198
Length = 198
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 47/54 (87%)
Query: 233 DPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 286
DPQ++ ARRRRE+I+E+++IL+ +VP G K+D ++ML+EA++Y KFL+ Q+++L
Sbjct: 121 DPQTVVARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRIL 174
>AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 57/91 (62%), Gaps = 4/91 (4%)
Query: 219 KLKGKSR----SERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQ 274
K G SR S+R + + ++ RRRR++INE+++ LQ L+PN KVD ++ML+EA++
Sbjct: 328 KEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIE 387
Query: 275 YVKFLQLQIKLLSSDDLWMYAPIAFNGMNIG 305
Y+K LQLQ++++S + P +G
Sbjct: 388 YLKSLQLQVQIMSMASGYYLPPAVMFPPGMG 418
>AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 57/91 (62%), Gaps = 4/91 (4%)
Query: 219 KLKGKSR----SERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQ 274
K G SR S+R + + ++ RRRR++INE+++ LQ L+PN KVD ++ML+EA++
Sbjct: 328 KEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIE 387
Query: 275 YVKFLQLQIKLLSSDDLWMYAPIAFNGMNIG 305
Y+K LQLQ++++S + P +G
Sbjct: 388 YLKSLQLQVQIMSMASGYYLPPAVMFPPGMG 418
>AT3G07340.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:2341188-2343288 REVERSE
LENGTH=456
Length = 456
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Query: 225 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVD-ISTMLEEAVQYVKFLQLQI 283
R+ RG ATD S+ R RREKI+ER+K+LQ+LVP KV + ML+E + YV+ LQ Q+
Sbjct: 259 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 318
Query: 284 KLLSSDDLWMYAPIAFNGMNIGLDLNLFPT 313
+ LS + + FN M+ L ++FP+
Sbjct: 319 EFLSMKLSSVNTRLDFN-MDALLSKDIFPS 347
>AT1G51140.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:18943802-18945613 REVERSE
LENGTH=379
Length = 379
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 223 KSRSERGSATDPQSIYARRRREKINERLKILQNLVPN-GTKVDISTMLEEAVQYVKFLQL 281
K R++RG AT P+SI R RR KI+ER++ LQ+LVPN T+ + + ML+ AVQY+K LQ
Sbjct: 303 KIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQE 362
Query: 282 QIKLL 286
Q+K L
Sbjct: 363 QVKAL 367
>AT5G50915.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:20710764-20712252 REVERSE
LENGTH=286
Length = 286
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Query: 225 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 283
R+ RG ATD S+ R RREKI+ER++ LQNLVP KV + ML+E + YV+ LQ Q+
Sbjct: 137 RARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQV 196
Query: 284 KLLSSDDLWMYAPIAFNGMNIGLDLN 309
+ LS L +P+ + + G DL+
Sbjct: 197 EFLSM-KLTSISPVVY---DFGSDLD 218
>AT5G50915.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:20710764-20712252 REVERSE
LENGTH=286
Length = 286
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Query: 225 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 283
R+ RG ATD S+ R RREKI+ER++ LQNLVP KV + ML+E + YV+ LQ Q+
Sbjct: 137 RARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQV 196
Query: 284 KLLSSDDLWMYAPIAFNGMNIGLDLN 309
+ LS L +P+ + + G DL+
Sbjct: 197 EFLSM-KLTSISPVVY---DFGSDLD 218
>AT1G26260.3 | Symbols: CIB5 | cryptochrome-interacting
basic-helix-loop-helix 5 | chr1:9087214-9089035 FORWARD
LENGTH=339
Length = 339
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 10/87 (11%)
Query: 225 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 283
R+ RG AT+ S+ R RREKI+ER+K LQ+LVP KV + ML+E + YV+ LQ QI
Sbjct: 173 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQI 232
Query: 284 KLLSSDDLWMYAPIAFNGMNIGLDLNL 310
+ LS + + +N LD NL
Sbjct: 233 EFLS---------MKLSAVNPVLDFNL 250
>AT1G73830.2 | Symbols: BEE3 | BR enhanced expression 3 |
chr1:27760027-27761346 FORWARD LENGTH=260
Length = 260
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 225 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQI 283
R+ RG ATD SI R RR KINERLK LQ++VP K + ++TML+E + YV+ LQ Q+
Sbjct: 148 RARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQV 207
Query: 284 KLLS 287
+ LS
Sbjct: 208 EFLS 211
>AT1G26260.2 | Symbols: CIB5 | cryptochrome-interacting
basic-helix-loop-helix 5 | chr1:9087214-9089035 FORWARD
LENGTH=390
Length = 390
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 10/87 (11%)
Query: 225 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 283
R+ RG AT+ S+ R RREKI+ER+K LQ+LVP KV + ML+E + YV+ LQ QI
Sbjct: 224 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQI 283
Query: 284 KLLSSDDLWMYAPIAFNGMNIGLDLNL 310
+ LS + + +N LD NL
Sbjct: 284 EFLS---------MKLSAVNPVLDFNL 301
>AT1G26260.1 | Symbols: CIB5 | cryptochrome-interacting
basic-helix-loop-helix 5 | chr1:9087214-9089035 FORWARD
LENGTH=390
Length = 390
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 10/87 (11%)
Query: 225 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 283
R+ RG AT+ S+ R RREKI+ER+K LQ+LVP KV + ML+E + YV+ LQ QI
Sbjct: 224 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQI 283
Query: 284 KLLSSDDLWMYAPIAFNGMNIGLDLNL 310
+ LS + + +N LD NL
Sbjct: 284 EFLS---------MKLSAVNPVLDFNL 301
>AT1G73830.1 | Symbols: BEE3 | BR enhanced expression 3 |
chr1:27760027-27761346 FORWARD LENGTH=261
Length = 261
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 225 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQI 283
R+ RG ATD SI R RR KINERLK LQ++VP K + ++TML+E + YV+ LQ Q+
Sbjct: 148 RARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQV 207
Query: 284 KLLS 287
+ LS
Sbjct: 208 EFLS 211
>AT2G20180.3 | Symbols: PIL5 | phytochrome interacting factor 3-like
5 | chr2:8704276-8706538 REVERSE LENGTH=478
Length = 478
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 47/62 (75%)
Query: 226 SERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKL 285
++R A + ++ R+RR++INER+K LQ L+P K D ++ML+EA++Y+K LQLQI++
Sbjct: 280 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQM 339
Query: 286 LS 287
+S
Sbjct: 340 MS 341
>AT2G20180.2 | Symbols: PIL5 | phytochrome interacting factor 3-like
5 | chr2:8704525-8706538 REVERSE LENGTH=478
Length = 478
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 47/62 (75%)
Query: 226 SERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKL 285
++R A + ++ R+RR++INER+K LQ L+P K D ++ML+EA++Y+K LQLQI++
Sbjct: 280 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQM 339
Query: 286 LS 287
+S
Sbjct: 340 MS 341
>AT2G20180.1 | Symbols: PIL5, PIF1 | phytochrome interacting factor
3-like 5 | chr2:8704525-8706237 REVERSE LENGTH=407
Length = 407
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 47/62 (75%)
Query: 226 SERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKL 285
++R A + ++ R+RR++INER+K LQ L+P K D ++ML+EA++Y+K LQLQI++
Sbjct: 209 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQM 268
Query: 286 LS 287
+S
Sbjct: 269 MS 270
>AT1G59640.1 | Symbols: ZCW32, BPE, BPEub | BIG PETAL P |
chr1:21909464-21911030 REVERSE LENGTH=264
Length = 264
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 8/92 (8%)
Query: 225 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 283
R+ RG ATD S+ R RREKI+ER+KILQ+LVP KV + +L+E + Y++ LQ Q+
Sbjct: 137 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 196
Query: 284 KLLSSDDLWMYAPIAFNGMNIGLDLNLFPTKQ 315
+ LS M + MN G++ +FP K+
Sbjct: 197 EFLS-----MKLEAVNSRMNPGIE--VFPPKE 221
>AT4G34530.1 | Symbols: CIB1 | cryptochrome-interacting
basic-helix-loop-helix 1 | chr4:16498466-16499946
FORWARD LENGTH=335
Length = 335
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 225 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 283
R+ RG ATD SI R RREKI+ER+K LQ+LVP K+ + ML+E + YV+ LQ QI
Sbjct: 173 RARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQI 232
Query: 284 KLLS 287
+ LS
Sbjct: 233 EFLS 236
>AT4G09180.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:5847513-5849500 FORWARD
LENGTH=262
Length = 262
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 223 KSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTK-VDISTMLEEAVQYVKFLQL 281
+ R++RG AT P+SI R RR +I++R++ LQ LVPN K + + MLEEAV+YVK LQ
Sbjct: 183 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQR 242
Query: 282 QIKLLSSD 289
QI+ L+ +
Sbjct: 243 QIQELTEE 250
>AT5G48560.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:19684160-19686871 FORWARD
LENGTH=498
Length = 498
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 225 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 283
R+ RG ATD S+ R RREKI ER+K+LQ+LVP KV + ML+E + YV+ LQ Q+
Sbjct: 302 RARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 361
Query: 284 KLLS 287
+ LS
Sbjct: 362 EFLS 365
>AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17414167-17415945
FORWARD LENGTH=373
Length = 373
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 50/74 (67%)
Query: 231 ATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDD 290
A + ++ +RRR +INE++K LQ+L+PN K D ++ML+EA++Y+K LQLQ+++L+ +
Sbjct: 198 AAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRN 257
Query: 291 LWMYAPIAFNGMNI 304
P+ G +
Sbjct: 258 GINLHPLCLPGTTL 271
>AT1G25330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:8880515-8882018 REVERSE
LENGTH=223
Length = 223
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 225 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQI 283
R++RG ATD S+ R RREKINERLK LQ+LVP K + ++ ML+ + YV+ LQ QI
Sbjct: 105 RAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQI 164
Query: 284 KLLS 287
+ LS
Sbjct: 165 EFLS 168
>AT5G09750.1 | Symbols: HEC3 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:3026401-3027075
REVERSE LENGTH=224
Length = 224
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 61/76 (80%), Gaps = 2/76 (2%)
Query: 214 DSTTIKLKGKSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAV 273
D T+K K K R+ R S DPQS+ AR RRE+I+ER++ILQ LVP GTK+D ++ML+EA+
Sbjct: 111 DPATVK-KPKRRNVRIS-DDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAI 168
Query: 274 QYVKFLQLQIKLLSSD 289
+YVKFL+ QI+LL+++
Sbjct: 169 RYVKFLKRQIRLLNNN 184
>AT1G35460.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:13040092-13041907 FORWARD
LENGTH=259
Length = 259
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 223 KSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTK-VDISTMLEEAVQYVKFLQL 281
+ R++RG AT P+SI R RR +I++R++ LQ LVPN K + + MLEEAV+YVK LQ
Sbjct: 180 RVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQS 239
Query: 282 QIKLLS 287
QI+ L+
Sbjct: 240 QIQELT 245
>AT1G59640.2 | Symbols: ZCW32, BPE, BPEp | BIG PETAL P |
chr1:21909635-21911030 REVERSE LENGTH=343
Length = 343
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 8/92 (8%)
Query: 225 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 283
R+ RG ATD S+ R RREKI+ER+KILQ+LVP KV + +L+E + Y++ LQ Q+
Sbjct: 137 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 196
Query: 284 KLLSSDDLWMYAPIAFNGMNIGLDLNLFPTKQ 315
+ LS M + MN G++ +FP K+
Sbjct: 197 EFLS-----MKLEAVNSRMNPGIE--VFPPKE 221
>AT1G18400.1 | Symbols: BEE1 | BR enhanced expression 1 |
chr1:6331464-6333576 FORWARD LENGTH=260
Length = 260
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 225 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQI 283
R+ RG ATD S+ R RR KINERL+ LQ++VP K + ++TML+E + YV+ LQ Q+
Sbjct: 146 RARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQV 205
Query: 284 KLLS 287
+ LS
Sbjct: 206 EFLS 209
>AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17863-19848
FORWARD LENGTH=399
Length = 399
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 49/73 (67%), Gaps = 6/73 (8%)
Query: 219 KLKGKS----RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQ 274
K GKS + R +A QS R+RR+KIN+R+K LQ LVPN +K D ++ML+E ++
Sbjct: 200 KAGGKSSVSTKRSRAAAIHNQS--ERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIE 257
Query: 275 YVKFLQLQIKLLS 287
Y+K LQ Q+ ++S
Sbjct: 258 YLKQLQAQVSMMS 270
>AT4G28790.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14218329-14220173 FORWARD
LENGTH=413
Length = 413
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 226 SERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKL 285
S+R A + RRRR+KINE +K LQ L+P TK D S+ML++ ++YVK LQ QI++
Sbjct: 273 SKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQM 332
Query: 286 LSSDDLWMYAPIAFNG 301
S + M P+ + G
Sbjct: 333 FSMGHV-MIPPMMYAG 347
>AT1G68920.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:25915620-25917675 FORWARD
LENGTH=486
Length = 486
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 225 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 283
R+ RG AT+ S+ R RREKI+ER+K LQ+LVP KV + ML+E + YV+ LQ Q+
Sbjct: 304 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 363
Query: 284 KLLS 287
+ LS
Sbjct: 364 EFLS 367
>AT1G68920.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:25915620-25917675 FORWARD
LENGTH=486
Length = 486
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 225 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 283
R+ RG AT+ S+ R RREKI+ER+K LQ+LVP KV + ML+E + YV+ LQ Q+
Sbjct: 304 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 363
Query: 284 KLLS 287
+ LS
Sbjct: 364 EFLS 367
>AT1G68920.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:25915620-25917675 FORWARD
LENGTH=485
Length = 485
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 225 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 283
R+ RG AT+ S+ R RREKI+ER+K LQ+LVP KV + ML+E + YV+ LQ Q+
Sbjct: 303 RARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQV 362
Query: 284 KLLS 287
+ LS
Sbjct: 363 EFLS 366
>AT2G46970.1 | Symbols: PIL1 | phytochrome interacting factor 3-like
1 | chr2:19295617-19297678 REVERSE LENGTH=416
Length = 416
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 67/107 (62%), Gaps = 14/107 (13%)
Query: 212 QKDSTTIKLKGKSR---SERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTM 268
+ D ++ ++R ++R +T+ +Y R+RR++ N++++ LQ+L+PN K D +++
Sbjct: 208 ESDDAKTQVHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDKASL 267
Query: 269 LEEAVQYVKFLQLQIKLLSSDD----------LWMYAPIAFNGMNIG 305
L+EA++Y++ LQLQ++++S + + Y+P+ GM++G
Sbjct: 268 LDEAIKYMRTLQLQVQMMSMGNGLIRPPTMLPMGHYSPMGL-GMHMG 313
>AT2G42280.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:17611428-17613163 REVERSE
LENGTH=359
Length = 359
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 223 KSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTK-VDISTMLEEAVQYVKFLQL 281
K R++RG AT P+SI R RR +I+ER++ LQ LVPN K + S ML+ AV Y+K LQ
Sbjct: 278 KIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQR 337
Query: 282 QIKLL 286
Q K+L
Sbjct: 338 QYKIL 342
>AT3G23690.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:8528933-8530655 REVERSE
LENGTH=371
Length = 371
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 225 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 283
R+ RG ATD S+ R RREKI+ER+ +LQ+LVP ++ + ML+E + YV+ LQ Q+
Sbjct: 192 RARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQV 251
Query: 284 KLLS 287
+ LS
Sbjct: 252 EFLS 255
>AT2G18300.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:7952546-7954446 REVERSE
LENGTH=364
Length = 364
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 128 EPVSEPPEEDITSNLEKSGKRSRSAMEVQKNKTNVKSRKKAKSAFTSNTEEDRNLGLHGQ 187
EPV D L K+G+ +R+ K K VK+R++ K+ E + + G+
Sbjct: 101 EPV------DTMEVLLKTGEETRAVALKNKRKPEVKTREEQKTEKKIKVEAETESSMKGK 154
Query: 188 XXXXXXXXXXXXXXXXXXXXXXXXQKDSTTIKLKGKSRSERGSATDPQSIYARRRREKIN 247
+ D + R+ RG ATD S+ R RREKI+
Sbjct: 155 SNMGNTEASSDTSKETSKGASENQKLDYIHV------RARRGQATDRHSLAERARREKIS 208
Query: 248 ERLKILQNLVPNGTKVD-ISTMLEEAVQYVKFLQLQIKLLS 287
+++K LQ++VP KV + ML+E + YV+ LQ Q++ LS
Sbjct: 209 KKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLS 249
>AT2G18300.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:7953022-7954446 REVERSE
LENGTH=335
Length = 335
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 128 EPVSEPPEEDITSNLEKSGKRSRSAMEVQKNKTNVKSRKKAKSAFTSNTEEDRNLGLHGQ 187
EPV D L K+G+ +R+ K K VK+R++ K+ E + + G+
Sbjct: 101 EPV------DTMEVLLKTGEETRAVALKNKRKPEVKTREEQKTEKKIKVEAETESSMKGK 154
Query: 188 XXXXXXXXXXXXXXXXXXXXXXXXQKDSTTIKLKGKSRSERGSATDPQSIYARRRREKIN 247
+ D + R+ RG ATD S+ R RREKI+
Sbjct: 155 SNMGNTEASSDTSKETSKGASENQKLDYIHV------RARRGQATDRHSLAERARREKIS 208
Query: 248 ERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQIKLLS 287
+++K LQ++VP KV + ML+E + YV+ LQ Q++ LS
Sbjct: 209 KKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLS 249
>AT2G18300.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:7953022-7954446 REVERSE
LENGTH=337
Length = 337
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 128 EPVSEPPEEDITSNLEKSGKRSRSAMEVQKNKTNVKSRKKAKSAFTSNTEEDRNLGLHGQ 187
EPV D L K+G+ +R+ K K VK+R++ K+ E + + G+
Sbjct: 101 EPV------DTMEVLLKTGEETRAVALKNKRKPEVKTREEQKTEKKIKVEAETESSMKGK 154
Query: 188 XXXXXXXXXXXXXXXXXXXXXXXXQKDSTTIKLKGKSRSERGSATDPQSIYARRRREKIN 247
+ D + R+ RG ATD S+ R RREKI+
Sbjct: 155 SNMGNTEASSDTSKETSKGASENQKLDYIHV------RARRGQATDRHSLAERARREKIS 208
Query: 248 ERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQIKLLS 287
+++K LQ++VP KV + ML+E + YV+ LQ Q++ LS
Sbjct: 209 KKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLS 249
>AT4G02590.2 | Symbols: UNE12 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:1137968-1140306
REVERSE LENGTH=310
Length = 310
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 50/72 (69%)
Query: 220 LKGKSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFL 279
++ + R+ RG ATDP SI R RRE+I ER++ LQ LVP K D + M++E V YVKFL
Sbjct: 142 IRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFL 201
Query: 280 QLQIKLLSSDDL 291
+LQ+K+LS L
Sbjct: 202 RLQVKVLSMSRL 213
>AT4G02590.1 | Symbols: UNE12 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:1137968-1140306
REVERSE LENGTH=310
Length = 310
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 50/72 (69%)
Query: 220 LKGKSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFL 279
++ + R+ RG ATDP SI R RRE+I ER++ LQ LVP K D + M++E V YVKFL
Sbjct: 142 IRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFL 201
Query: 280 QLQIKLLSSDDL 291
+LQ+K+LS L
Sbjct: 202 RLQVKVLSMSRL 213
>AT1G05805.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:1744843-1747427 FORWARD
LENGTH=362
Length = 362
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 223 KSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTK-VDISTMLEEAVQYVKFLQL 281
K R++RG AT P+SI R RR +I+ +LK LQ+LVPN K S ML+ AVQ++K LQ
Sbjct: 282 KIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQH 341
Query: 282 QIKLLSSD 289
Q++ L D
Sbjct: 342 QLQNLKKD 349
>AT1G10120.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:3304228-3305984 REVERSE
LENGTH=366
Length = 366
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 225 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 283
R+ RG AT+ S+ R RREKI+ER+++LQ LVP K+ + ML+E + YV+ LQ Q+
Sbjct: 207 RARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQV 266
Query: 284 KLLS 287
+ LS
Sbjct: 267 EFLS 270
>AT4G02590.3 | Symbols: UNE12 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:1137968-1140117
REVERSE LENGTH=247
Length = 247
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 50/72 (69%)
Query: 220 LKGKSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFL 279
++ + R+ RG ATDP SI R RRE+I ER++ LQ LVP K D + M++E V YVKFL
Sbjct: 79 IRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFL 138
Query: 280 QLQIKLLSSDDL 291
+LQ+K+LS L
Sbjct: 139 RLQVKVLSMSRL 150
>AT1G03040.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:704279-706457 REVERSE
LENGTH=302
Length = 302
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 50/72 (69%)
Query: 220 LKGKSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFL 279
++ + R+ RG ATDP SI R RRE+I ER++ LQ LVP K D + M++E V YVKFL
Sbjct: 140 IRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFL 199
Query: 280 QLQIKLLSSDDL 291
+LQ+K+LS L
Sbjct: 200 RLQVKVLSMSRL 211
>AT1G03040.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:704279-706457 REVERSE
LENGTH=297
Length = 297
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 50/72 (69%)
Query: 220 LKGKSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFL 279
++ + R+ RG ATDP SI R RRE+I ER++ LQ LVP K D + M++E V YVKFL
Sbjct: 135 IRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFL 194
Query: 280 QLQIKLLSSDDL 291
+LQ+K+LS L
Sbjct: 195 RLQVKVLSMSRL 206
>AT3G57800.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:21408034-21411321 REVERSE
LENGTH=379
Length = 379
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 225 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVD-ISTMLEEAVQYVKFLQLQI 283
R+ RG ATD S+ R RREKIN R+K+LQ LVP K+ + +L+E + +V+ LQ Q+
Sbjct: 205 RARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQV 264
Query: 284 KLLSSDDLWMYAPIAFNGMNIGLDLNL 310
++LS + +N +D NL
Sbjct: 265 EMLS---------MRLAAVNPRIDFNL 282
>AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:26785332-26786338
REVERSE LENGTH=210
Length = 210
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 39/48 (81%)
Query: 240 RRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS 287
++RR KINE++K LQ L+PN K D ++ML+EA++Y+K LQLQ++ L+
Sbjct: 103 KKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLA 150
>AT2G42300.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:17621542-17624635 FORWARD
LENGTH=327
Length = 327
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 225 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVD-ISTMLEEAVQYVKFLQLQI 283
R+ RG ATD S+ R RREKIN R+K+LQ LVP K+ + +L+E + +V+ LQ Q+
Sbjct: 186 RARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQV 245
Query: 284 KLLS 287
++LS
Sbjct: 246 EMLS 249
>AT4G28815.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14228719-14230288 FORWARD
LENGTH=307
Length = 307
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 221 KGKSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQ 280
+G + +R A + ++ RRRREKINER+K LQ L+P K +MLE+ ++YVK L+
Sbjct: 141 RGSTSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSLE 200
Query: 281 LQI-KLLSSDDLWMYAPIAF 299
+QI + + + M P A+
Sbjct: 201 MQINQFMPHMAMGMNQPPAY 220
>AT5G62610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:25133117-25134600 REVERSE
LENGTH=281
Length = 281
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 54/90 (60%), Gaps = 6/90 (6%)
Query: 225 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQI 283
R+ RG ATD S+ R RREKI+E++ LQ+++P K + + +L+E + Y++ LQ Q+
Sbjct: 154 RARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQV 213
Query: 284 KLLSSDDLWMYAPIAFNGMNIGLDLNLFPT 313
+ LS M + +G + G + +FP+
Sbjct: 214 EFLS-----MKLEVVNSGASTGPTIGVFPS 238
>AT4G36540.2 | Symbols: BEE2 | BR enhanced expression 2 |
chr4:17243699-17244965 FORWARD LENGTH=302
Length = 302
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 225 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 283
R+ RG ATD S+ R RREKI++++K LQ++VP KV + ML+E + YV+ LQ Q+
Sbjct: 142 RARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQV 201
Query: 284 KLLS 287
+ LS
Sbjct: 202 EFLS 205
>AT4G36540.1 | Symbols: BEE2 | BR enhanced expression 2 |
chr4:17243699-17244965 FORWARD LENGTH=304
Length = 304
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 225 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 283
R+ RG ATD S+ R RREKI++++K LQ++VP KV + ML+E + YV+ LQ Q+
Sbjct: 142 RARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQV 201
Query: 284 KLLS 287
+ LS
Sbjct: 202 EFLS 205
>AT4G28790.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14218329-14219887 FORWARD
LENGTH=340
Length = 340
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 226 SERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIK 284
S+R A + RRRR+KINE +K LQ L+P TK D S+ML++ ++YVK LQ QI+
Sbjct: 273 SKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQ 331
>AT2G43140.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:17931680-17935639 REVERSE
LENGTH=309
Length = 309
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 223 KSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTK-VDISTMLEEAVQYVKFLQL 281
++R++RG AT P+SI R RR +I+ +LK LQ LVPN K + ML+ AV+++K LQ
Sbjct: 230 RARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQH 289
Query: 282 QIKLL 286
Q++ L
Sbjct: 290 QVESL 294
>AT2G43140.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:17932376-17935639 REVERSE
LENGTH=297
Length = 297
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 223 KSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTK-VDISTMLEEAVQYVKFLQL 281
++R++RG AT P+SI R RR +I+ +LK LQ LVPN K + ML+ AV+++K LQ
Sbjct: 232 RARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQH 291
Query: 282 QIKL 285
Q+++
Sbjct: 292 QVEV 295
>AT3G50330.1 | Symbols: HEC2 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr3:18657423-18658118
REVERSE LENGTH=231
Length = 231
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 46/54 (85%)
Query: 233 DPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 286
DPQS+ AR RRE+I+ER++ILQ LVP GTK+D ++ML+EA+ YVKFL+ Q++ L
Sbjct: 128 DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSL 181
>AT5G67060.1 | Symbols: HEC1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:26766276-26767001
FORWARD LENGTH=241
Length = 241
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 223 KSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQ 282
K R+ R S DPQS+ AR RRE+I+ER++ILQ LVP GTK+D ++ML+EA+ YVKFL+ Q
Sbjct: 122 KRRNVRISK-DPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQ 180
Query: 283 IKLL 286
++ L
Sbjct: 181 VQSL 184
>AT4G28800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14221970-14224075 FORWARD
LENGTH=445
Length = 445
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 217 TIKLKGKSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYV 276
T + +G + +R + ++ RRRREKINE++K LQ L+P K + L++A++YV
Sbjct: 242 TEEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYV 301
Query: 277 KFLQLQIKLLSS 288
K LQ QI+ + S
Sbjct: 302 KSLQSQIQGMMS 313
>AT3G62090.1 | Symbols: PIL2, PIF6 | phytochrome interacting factor
3-like 2 | chr3:22989097-22990495 REVERSE LENGTH=346
Length = 346
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 240 RRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLW----MYA 295
R +R IN++++ LQNL+PN K D +ML+EA+ Y+ LQLQ+++++ + + M
Sbjct: 181 RNQRNDINKKMRTLQNLLPNSHKDDNESMLDEAINYMTNLQLQVQMMTMGNRFVTPSMMM 240
Query: 296 PIAFNGMNIGLDLNL 310
P+ N +GL + +
Sbjct: 241 PLGPNYSQMGLAMGV 255
>AT3G62090.2 | Symbols: PIL2, PIF6 | phytochrome interacting factor
3-like 2 | chr3:22989097-22990546 REVERSE LENGTH=363
Length = 363
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 240 RRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLW----MYA 295
R +R IN++++ LQNL+PN K D +ML+EA+ Y+ LQLQ+++++ + + M
Sbjct: 198 RNQRNDINKKMRTLQNLLPNSHKDDNESMLDEAINYMTNLQLQVQMMTMGNRFVTPSMMM 257
Query: 296 PIAFNGMNIGLDLNL 310
P+ N +GL + +
Sbjct: 258 PLGPNYSQMGLAMGV 272
>AT3G19500.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:6759289-6760893 REVERSE
LENGTH=270
Length = 270
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 221 KGKSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQ 280
KGK E+ S A+ R+E++ ER+ LQ LV K D +++L EA+ Y+KFLQ
Sbjct: 140 KGKRNQEKSSVG-----IAKVRKERLGERIAALQQLVSPYGKTDAASVLHEAMGYIKFLQ 194
Query: 281 LQIKLLSS 288
QI++L S
Sbjct: 195 DQIQVLCS 202
>AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type
transcription factor | chr2:19091187-19092887 REVERSE
LENGTH=566
Length = 566
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 38/47 (80%)
Query: 240 RRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 286
R+RREK+N+R L+++VPN +K+D +++L +A+ Y+K LQ ++K++
Sbjct: 401 RQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIM 447
>AT2G43010.2 | Symbols: PIF4, SRL2, AtPIF4 | phytochrome interacting
factor 4 | chr2:17887003-17888823 FORWARD LENGTH=428
Length = 428
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 34/41 (82%)
Query: 246 INERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 286
INER+K LQ L+P+ +K D +++L+EA+ Y+K LQLQ++++
Sbjct: 273 INERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 313
>AT2G43010.1 | Symbols: PIF4, SRL2, AtPIF4 | phytochrome interacting
factor 4 | chr2:17887003-17888823 FORWARD LENGTH=430
Length = 430
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 34/41 (82%)
Query: 246 INERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL 286
INER+K LQ L+P+ +K D +++L+EA+ Y+K LQLQ++++
Sbjct: 273 INERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 313
>AT3G59060.4 | Symbols: PIL6, PIF5 | phytochrome interacting factor
3-like 6 | chr3:21828189-21829895 REVERSE LENGTH=444
Length = 444
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 53/83 (63%), Gaps = 8/83 (9%)
Query: 214 DSTTIKLKGKSRS---ERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLE 270
D T+ K RS R A + ++ RRRR++INER+K LQ L+P+ ++ D +++L+
Sbjct: 237 DDQTMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILD 296
Query: 271 EAVQYVKFLQLQIKLLSSDDLWM 293
EA+ Y+K LQ+Q+++ +WM
Sbjct: 297 EAIDYLKSLQMQLQV-----MWM 314
>AT3G59060.3 | Symbols: PIL6, PIF5 | phytochrome interacting factor
3-like 6 | chr3:21828189-21829895 REVERSE LENGTH=444
Length = 444
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 53/83 (63%), Gaps = 8/83 (9%)
Query: 214 DSTTIKLKGKSRS---ERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLE 270
D T+ K RS R A + ++ RRRR++INER+K LQ L+P+ ++ D +++L+
Sbjct: 237 DDQTMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILD 296
Query: 271 EAVQYVKFLQLQIKLLSSDDLWM 293
EA+ Y+K LQ+Q+++ +WM
Sbjct: 297 EAIDYLKSLQMQLQV-----MWM 314
>AT3G59060.2 | Symbols: PIL6, PIF5 | phytochrome interacting factor
3-like 6 | chr3:21828189-21829895 REVERSE LENGTH=444
Length = 444
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 53/83 (63%), Gaps = 8/83 (9%)
Query: 214 DSTTIKLKGKSRS---ERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLE 270
D T+ K RS R A + ++ RRRR++INER+K LQ L+P+ ++ D +++L+
Sbjct: 237 DDQTMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILD 296
Query: 271 EAVQYVKFLQLQIKLLSSDDLWM 293
EA+ Y+K LQ+Q+++ +WM
Sbjct: 297 EAIDYLKSLQMQLQV-----MWM 314
>AT3G59060.1 | Symbols: PIL6, PIF5 | phytochrome interacting factor
3-like 6 | chr3:21828189-21829895 REVERSE LENGTH=442
Length = 442
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 53/83 (63%), Gaps = 8/83 (9%)
Query: 214 DSTTIKLKGKSRS---ERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLE 270
D T+ K RS R A + ++ RRRR++INER+K LQ L+P+ ++ D +++L+
Sbjct: 237 DDQTMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILD 296
Query: 271 EAVQYVKFLQLQIKLLSSDDLWM 293
EA+ Y+K LQ+Q+++ +WM
Sbjct: 297 EAIDYLKSLQMQLQV-----MWM 314
>AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154872 FORWARD
LENGTH=247
Length = 247
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 224 SRSERGSATDPQS---IYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQ 280
S S G+A+ P S + R RR+K+N+RL L+++VPN TK+D ++++++A+ Y++ LQ
Sbjct: 41 SSSPDGAASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQ 100
Query: 281 LQIKLLSSD 289
+ K L ++
Sbjct: 101 YEEKKLEAE 109
>AT1G02340.1 | Symbols: HFR1, RSF1, FBI1, REP1 | basic
helix-loop-helix (bHLH) DNA-binding superfamily protein
| chr1:465933-467685 REVERSE LENGTH=292
Length = 292
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 38/49 (77%)
Query: 240 RRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSS 288
RRR EK++ +++ LQ LVPN K D ++L++ ++Y+K LQLQ++++S+
Sbjct: 144 RRRDEKMSNKMRKLQQLVPNCHKTDKVSVLDKTIEYMKNLQLQLQMMST 192
>AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154556 FORWARD
LENGTH=219
Length = 219
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 224 SRSERGSATDPQS---IYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQ 280
S S G+A+ P S + R RR+K+N+RL L+++VPN TK+D ++++++A+ Y++ LQ
Sbjct: 42 SSSPDGAASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQ 101
Query: 281 LQIKLLSSD 289
+ K L ++
Sbjct: 102 YEEKKLEAE 110
>AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23153293 FORWARD
LENGTH=226
Length = 226
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 224 SRSERGSATDPQS---IYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQ 280
S S G+A+ P S + R RR+K+N+RL L+++VPN TK+D ++++++A+ Y++ LQ
Sbjct: 42 SSSPDGAASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQ 101
Query: 281 LQIKLLSSD 289
+ K L ++
Sbjct: 102 YEEKKLEAE 110
>AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr2:7331721-7334077
FORWARD LENGTH=571
Length = 571
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 240 RRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSD 289
RRRR+K+N+RL L++LVP TK+D +++L +A+ YVK LQ + K L +
Sbjct: 320 RRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDE 369
>AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29,
ATFIT1 | FER-like regulator of iron uptake |
chr2:12004713-12005908 FORWARD LENGTH=318
Length = 318
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 38/53 (71%)
Query: 237 IYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSD 289
I RRRR ++ ++L L++LVPN TK+D ++++ +AV YV+ LQ Q K L SD
Sbjct: 134 ISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSD 186
>AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154801 FORWARD
LENGTH=264
Length = 264
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 224 SRSERGSATDPQS---IYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQ 280
S S G+A+ P S + R RR+K+N+RL L+++VPN TK+D ++++++A+ Y++ LQ
Sbjct: 42 SSSPDGAASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQ 101
Query: 281 LQIKLLSSD 289
+ K L ++
Sbjct: 102 YEEKKLEAE 110
>AT2G31280.1 | Symbols: CPUORF7 | conserved peptide upstream open
reading frame 7 | chr2:13339678-13343424 FORWARD
LENGTH=720
Length = 720
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 215 STTIKLKGKSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQ 274
S I K K R++ G ++ P+ R R+ I +R+K L+ LVPNG+K I ++LE ++
Sbjct: 533 SLDIPKKNKKRAKPGESSRPRP----RDRQLIQDRIKELRELVPNGSKCSIDSLLERTIK 588
Query: 275 YVKFLQ 280
++ FLQ
Sbjct: 589 HMLFLQ 594
>AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14647449 FORWARD
LENGTH=254
Length = 254
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 49/72 (68%), Gaps = 4/72 (5%)
Query: 222 GKSRSERGSATDPQS----IYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVK 277
G+S S G+AT P S + R RR+K+N+RL L+++VPN +K+D ++++++++ Y++
Sbjct: 38 GESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQ 97
Query: 278 FLQLQIKLLSSD 289
L Q K L ++
Sbjct: 98 ELIDQEKTLEAE 109
>AT2G31280.3 | Symbols: CPUORF7 | conserved peptide upstream open
reading frame 7 | chr2:13339678-13343424 FORWARD
LENGTH=737
Length = 737
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 215 STTIKLKGKSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQ 274
S I K K R++ G ++ P+ R R+ I +R+K L+ LVPNG+K I ++LE ++
Sbjct: 533 SLDIPKKNKKRAKPGESSRPRP----RDRQLIQDRIKELRELVPNGSKCSIDSLLERTIK 588
Query: 275 YVKFLQ 280
++ FLQ
Sbjct: 589 HMLFLQ 594
>AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14647449 FORWARD
LENGTH=225
Length = 225
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 49/72 (68%), Gaps = 4/72 (5%)
Query: 222 GKSRSERGSATDPQS----IYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVK 277
G+S S G+AT P S + R RR+K+N+RL L+++VPN +K+D ++++++++ Y++
Sbjct: 38 GESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQ 97
Query: 278 FLQLQIKLLSSD 289
L Q K L ++
Sbjct: 98 ELIDQEKTLEAE 109
>AT2G31280.2 | Symbols: CPUORF7 | conserved peptide upstream open
reading frame 7 | chr2:13339430-13343309 FORWARD
LENGTH=723
Length = 723
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 215 STTIKLKGKSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQ 274
S I K K R++ G ++ P+ R R+ I +R+K L+ LVPNG+K I ++LE ++
Sbjct: 505 SLDIPKKNKKRAKPGESSRPRP----RDRQLIQDRIKELRELVPNGSKCSIDSLLERTIK 560
Query: 275 YVKFLQ 280
++ FLQ
Sbjct: 561 HMLFLQ 566
>AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14645168 FORWARD
LENGTH=184
Length = 184
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 49/72 (68%), Gaps = 4/72 (5%)
Query: 222 GKSRSERGSATDPQS----IYARRRREKINERLKILQNLVPNGTKVDISTMLEEAVQYVK 277
G+S S G+AT P S + R RR+K+N+RL L+++VPN +K+D ++++++++ Y++
Sbjct: 38 GESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQ 97
Query: 278 FLQLQIKLLSSD 289
L Q K L ++
Sbjct: 98 ELIDQEKTLEAE 109