Miyakogusa Predicted Gene

Lj5g3v2060750.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2060750.1 tr|A9QNE4|A9QNE4_SOYBN Pyruvate orthophosphate
dikinase regulatory protein OS=Glycine max
GN=Gma.303,80.21,0,Kinase-PPPase,Bifunctional
kinase-pyrophosphorylase; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.56613.1
         (384 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G21210.1 | Symbols: ATRP1, RP1 | PPDK regulatory protein | ch...   448   e-126
AT3G01200.1 | Symbols: AtRP2, RP2 | PPDK regulatory protein 2 | ...   400   e-111
AT4G21210.2 | Symbols: ATRP1, RP1 | PPDK regulatory protein | ch...   390   e-108

>AT4G21210.1 | Symbols: ATRP1, RP1 | PPDK regulatory protein |
           chr4:11307002-11308587 FORWARD LENGTH=403
          Length = 403

 Score =  448 bits (1153), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 222/398 (55%), Positives = 270/398 (67%), Gaps = 35/398 (8%)

Query: 14  PPIRACADGGGHETGSKPVSWRP----------KVSPQLNRWSRARTIRSGRKLD----- 58
           PPI +  +      GS  VS             K S QLNRW+RART+RSG KLD     
Sbjct: 14  PPISSNLNPNSKPAGSDSVSLNASEPGSERKPRKFSSQLNRWNRARTLRSGAKLDSTITN 73

Query: 59  ------------RSSSRTQTLEXXXXXXXXXXXXXXXXXXXXXXXXFSSAKSIYIVSDGT 106
                        SSSRT                             ++AKSIYIVSDGT
Sbjct: 74  GSNNTTGPMRPIESSSRTDV--------STLDSDVSSSSNGVSEADMTAAKSIYIVSDGT 125

Query: 107 GWTAEHCVNAALGQFDYCLVDRGCPVSTHLFSEIDNREKLLEIIKQAAKEGALLVYTLAD 166
           GWTAEH VNAALGQFDYCLVDRGCPV+THLFS I++ EKL+EIIKQAA+EGA+++YTLAD
Sbjct: 126 GWTAEHAVNAALGQFDYCLVDRGCPVNTHLFSGIEDGEKLMEIIKQAAREGAMVIYTLAD 185

Query: 167 PSLASASEQACKLWGVPSTDVLGPVTEAVSTHLGVSPSGLPRGATGMPLSDDYFRRIEAI 226
           PS+A A+ +ACKLW +PS D+LGP+TE++S+HLG +PSGL RG T   L++DYF+RIEAI
Sbjct: 186 PSMAEATMRACKLWKIPSLDILGPITESISSHLGTNPSGLSRGITNSSLNEDYFKRIEAI 245

Query: 227 EFTIKQDDGACPQNLARAEIVLTGVSRTGKTPLSIYLAQKGYKVANVPIVMGVQMPRTLF 286
           EFTIK DDGA P+NL +A+IVL GVSRTGKTPLS YLAQKGYKV+NVPIV GV +P+TLF
Sbjct: 246 EFTIKHDDGALPENLEKADIVLVGVSRTGKTPLSTYLAQKGYKVSNVPIVNGVDLPKTLF 305

Query: 287 EVDPKKVFGLTINPLILQDIRRTRAKTLGFGHDTRSNYAEMDHIREELEFAGGLFAQNPA 346
           E+DP+KVFGL INPL+LQ IR  RAK+LG G   ++ Y+E+  ++EELE A  +FA+NP 
Sbjct: 306 EIDPRKVFGLMINPLVLQGIREARAKSLGLGSSFKTKYSELGSVKEELELAKKIFAENPT 365

Query: 347 WPVIDXXXXXXXXXXXXXLRLYHDRKHKCTMPRISKRY 384
           WPVI+             LRLY +R+    MPRISK Y
Sbjct: 366 WPVIEVTESAIEETAAVVLRLYDERQSNRAMPRISKSY 403


>AT3G01200.1 | Symbols: AtRP2, RP2 | PPDK regulatory protein 2 |
           chr3:69826-71348 REVERSE LENGTH=377
          Length = 377

 Score =  400 bits (1027), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 207/377 (54%), Positives = 260/377 (68%), Gaps = 22/377 (5%)

Query: 23  GGHETGSKP------VSWRPKVSPQLNRWSRARTIRSGRKLDR------SSSRTQTLEXX 70
           G HE  S+P       S + K+SP+LNRWSR R +RSG KLDR      +S R Q  E  
Sbjct: 8   GHHEPNSEPPIPTGSSSPKLKISPKLNRWSRGRALRSGVKLDRPIPRSDNSPRRQVTEAQ 67

Query: 71  XXXXXXXXXXXXXXXXXXXXXXFSSAKSIYIVSDGTGWTAEHCVNAALGQFDYCLVDRGC 130
                                  ++ KSIY+VSDGTGWTAEH VNAALGQF+   ++RG 
Sbjct: 68  PTDEADKKTTAIDVE-------VTAGKSIYLVSDGTGWTAEHSVNAALGQFEDFSLNRGS 120

Query: 131 PVSTHLFSEIDNREKLLEIIKQAAKEGALLVYTLADPSLASASEQACKLWGVPSTDVLGP 190
            V+THLFS +++ E+L+EIIKQAAKEGA+  YTLA+PS+A +++QAC   GV S D+LGP
Sbjct: 121 SVNTHLFSWVEDEERLIEIIKQAAKEGAMCFYTLANPSMAKSAKQACDQLGVLSVDILGP 180

Query: 191 VTEAVSTHLGVSPSGLPRGATG--MPLSDDYFRRIEAIEFTIKQDDGACPQNLARAEIVL 248
           + E +++HLGVSPSGL RGA G    L+D YF+RIEAIEFTIKQDDG  P+NL++A+IVL
Sbjct: 181 IIEGIASHLGVSPSGLTRGAPGRVKTLNDAYFKRIEAIEFTIKQDDGTLPENLSKADIVL 240

Query: 249 TGVSRTGKTPLSIYLAQKGYKVANVPIVMGVQMPRTLFEVDPKKVFGLTINPLILQDIRR 308
            GVSRTGKTPLS Y+AQKGYKVANVP VMGV+ PRTLF+V+P+KVFGL I  ++LQ IRR
Sbjct: 241 VGVSRTGKTPLSTYIAQKGYKVANVPFVMGVEPPRTLFQVEPRKVFGLKIQLVVLQAIRR 300

Query: 309 TRAKTLGFGHDTRSNYAEMDHIREELEFAGGLFAQNPAWPVIDXXXXXXXXXXXXXLRLY 368
           TR KTLG   +  +NY+ +D +R+EL+FA  ++ +NP W VID             LRLY
Sbjct: 301 TRVKTLGVDTEAENNYSGIDLVRKELDFASRIYERNPGWAVIDVTNKAIEETAAVILRLY 360

Query: 369 HD-RKHKCTMPRISKRY 384
           HD R    T+PRISKRY
Sbjct: 361 HDGRDTSTTVPRISKRY 377


>AT4G21210.2 | Symbols: ATRP1, RP1 | PPDK regulatory protein |
           chr4:11307002-11308587 FORWARD LENGTH=376
          Length = 376

 Score =  390 bits (1001), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 203/398 (51%), Positives = 246/398 (61%), Gaps = 62/398 (15%)

Query: 14  PPIRACADGGGHETGSKPVSWRP----------KVSPQLNRWSRARTIRSGRKLD----- 58
           PPI +  +      GS  VS             K S QLNRW+RART+RSG KLD     
Sbjct: 14  PPISSNLNPNSKPAGSDSVSLNASEPGSERKPRKFSSQLNRWNRARTLRSGAKLDSTITN 73

Query: 59  ------------RSSSRTQTLEXXXXXXXXXXXXXXXXXXXXXXXXFSSAKSIYIVSDGT 106
                        SSSRT                             ++AKSIYIVSDGT
Sbjct: 74  GSNNTTGPMRPIESSSRTDV--------STLDSDVSSSSNGVSEADMTAAKSIYIVSDGT 125

Query: 107 GWTAEHCVNAALGQFDYCLVDRGCPVSTHLFSEIDNREKLLEIIKQAAKEGALLVYTLAD 166
           GWTAEH VNAALGQFDYCLVDRGCPV+THLFS I++ EKL+EIIKQAA+EGA+++YTLAD
Sbjct: 126 GWTAEHAVNAALGQFDYCLVDRGCPVNTHLFSGIEDGEKLMEIIKQAAREGAMVIYTLAD 185

Query: 167 PSLASASEQACKLWGVPSTDVLGPVTEAVSTHLGVSPSGLPRGATGMPLSDDYFRRIEAI 226
           PS+A A+ +ACKLW +PS D+LGP+TE++S+HLG +PSGL RG T   L++DYF+RIEAI
Sbjct: 186 PSMAEATMRACKLWKIPSLDILGPITESISSHLGTNPSGLSRGITNSSLNEDYFKRIEAI 245

Query: 227 EFTIKQDDGACPQNLARAEIVLTGVSRTGKTPLSIYLAQKGYKVANVPIVMGVQMPRTLF 286
           EFTIK DDGA P+NL +A+IVL GVSRTGKTPLS YLAQKGYKV+NVPIV G        
Sbjct: 246 EFTIKHDDGALPENLEKADIVLVGVSRTGKTPLSTYLAQKGYKVSNVPIVNG-------- 297

Query: 287 EVDPKKVFGLTINPLILQDIRRTRAKTLGFGHDTRSNYAEMDHIREELEFAGGLFAQNPA 346
                              IR  RAK+LG G   ++ Y+E+  ++EELE A  +FA+NP 
Sbjct: 298 -------------------IREARAKSLGLGSSFKTKYSELGSVKEELELAKKIFAENPT 338

Query: 347 WPVIDXXXXXXXXXXXXXLRLYHDRKHKCTMPRISKRY 384
           WPVI+             LRLY +R+    MPRISK Y
Sbjct: 339 WPVIEVTESAIEETAAVVLRLYDERQSNRAMPRISKSY 376