Miyakogusa Predicted Gene
- Lj5g3v2058550.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2058550.1 Non Chatacterized Hit- tr|I1NGB6|I1NGB6_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,83.75,0,SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT
REGULATOR OF CHROMATIN SUBFAMILY-RELATED,NULL; HEL,CUFF.56581.1
(1079 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator | chr3:... 1486 0.0
AT5G19310.1 | Symbols: | Homeotic gene regulator | chr5:6498906... 1372 0.0
AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 578 e-165
AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 578 e-165
AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 578 e-165
AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 508 e-143
AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 508 e-143
AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 | c... 484 e-136
AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 | c... 484 e-136
AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 483 e-136
AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 483 e-136
AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 483 e-136
AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 | chr2:5544... 426 e-119
AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDD... 409 e-114
AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin re... 382 e-105
AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helic... 359 7e-99
AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 | chr... 358 2e-98
AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putat... 353 3e-97
AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putat... 353 3e-97
AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helic... 352 1e-96
AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containi... 299 7e-81
AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA ... 276 7e-74
AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic ac... 276 8e-74
AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containi... 272 8e-73
AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 | chr2:8129... 258 2e-68
AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog | chr3:21... 253 5e-67
AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 | chr3:6652799-6... 249 7e-66
AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 ... 248 1e-65
AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 | chr5:25... 241 2e-63
AT3G57300.2 | Symbols: INO80 | INO80 ortholog | chr3:21199612-21... 240 4e-63
AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORW... 145 2e-34
AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling facto... 131 2e-30
AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domai... 115 2e-25
AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein | chr5:75... 111 3e-24
AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleosid... 108 1e-23
AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside triph... 108 2e-23
AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside triph... 108 2e-23
AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside triph... 108 2e-23
AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 | chr2:91... 105 2e-22
AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 | chr1:16... 104 3e-22
AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helic... 102 1e-21
AT5G05130.1 | Symbols: | DNA/RNA helicase protein | chr5:151217... 97 8e-20
AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosph... 93 1e-18
AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helic... 92 2e-18
AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helic... 92 3e-18
AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domai... 90 1e-17
AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helic... 89 2e-17
AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein / ... 86 2e-16
AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein / ... 86 2e-16
AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helic... 84 7e-16
AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helic... 83 1e-15
AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 | chr3:88... 81 3e-15
AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containin... 75 2e-13
AT1G08060.2 | Symbols: MOM, MOM1 | ATP-dependent helicase family... 73 1e-12
AT1G08060.1 | Symbols: MOM, MOM1 | ATP-dependent helicase family... 73 1e-12
AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 | chr5:68... 72 3e-12
AT1G61140.2 | Symbols: EDA16 | SNF2 domain-containing protein / ... 70 5e-12
AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 | c... 67 5e-11
AT2G40770.1 | Symbols: | zinc ion binding;DNA binding;helicases... 64 7e-10
AT3G54460.1 | Symbols: | SNF2 domain-containing protein / helic... 56 2e-07
>AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator |
chr3:1802435-1807284 REVERSE LENGTH=1102
Length = 1102
Score = 1486 bits (3847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 754/1077 (70%), Positives = 876/1077 (81%), Gaps = 35/1077 (3%)
Query: 8 EEDKKEHAKTLICALNLLSRDLPLPSHLLTSVSSIYH-----------------NNHHDD 50
+ED E K+LICALN +SRDLPLP HL T+VSSIYH + +
Sbjct: 15 QEDPVETTKSLICALNYISRDLPLPPHLFTAVSSIYHGASSSSLSDSDVSPPLPTSPPAN 74
Query: 51 VGDSGEGLIADLEDAVLNQRLSRVSGSKLEEARGNRYQTQIQNRLNQLQELPSSRGDDLQ 110
G L+ + EDA+L QR SGS+L + NR ++ IQ RL++L+ELPS+RG+DLQ
Sbjct: 75 KAPYGADLMGEFEDALLKQRPDCESGSRLIQLLDNRNKSHIQRRLSELEELPSTRGEDLQ 134
Query: 111 SKCLLEYYGLKLAELQSKVRSDVSAENWLNVKCAYPDRQLFDWGMMRLRRPLYGVGDPFA 170
+KCLLE YGLKL ELQ KVR+ VS+E WL + CA Q+FDWGMMRL RP YGVGDPFA
Sbjct: 135 AKCLLELYGLKLRELQGKVRTAVSSEFWLRLNCADVSSQVFDWGMMRLPRPFYGVGDPFA 194
Query: 171 MDADDQLKKKRDVERLSRLEEVEKNHIETRKRKFFAEVLDTVRDFQLQIQASLKRRKQRN 230
M+ADDQ +KKRD ERLSRLEE EKN IET KRKFFAEVL+ VR+FQLQIQA+ KRR+QRN
Sbjct: 195 MEADDQFRKKRDAERLSRLEEEEKNLIETAKRKFFAEVLNAVREFQLQIQATQKRRRQRN 254
Query: 231 DGIQAWHGRQRQRATRAEKLRFQALKSDDQEAYMRMVKESKXXXXXXXXXXXXXXXXXXG 290
DG+QAWHGRQRQRATRAEKLR ALKSDDQEAYM++VKESK G
Sbjct: 255 DGVQAWHGRQRQRATRAEKLRLMALKSDDQEAYMKLVKESKNERLTTLLEETNKLLANLG 314
Query: 291 AAVQRQKDNKHLDGIEPLEESEADLPESDASKNGVSKESPLDEEID---SDHNGDSRDLL 347
AAVQRQKD K +GI+ L++SE+DL E DA ++ ++ D++ID SD+N DS DLL
Sbjct: 315 AAVQRQKDAKLPEGIDLLKDSESDLSELDAPRSEPLQDLLPDQDIDITESDNNDDSNDLL 374
Query: 348 EGQRQYNSAIHSIQEKITEQPSILQGGELRQYQIEGLQWMISLFNNNLNGILADEMGLGK 407
EGQRQYNSAIHSIQEK+TEQPS+L+GGELR YQ+EGLQWM+SLFNNNLNGILADEMGLGK
Sbjct: 375 EGQRQYNSAIHSIQEKVTEQPSLLEGGELRSYQLEGLQWMVSLFNNNLNGILADEMGLGK 434
Query: 408 TIQTISLIAHLLEYKGVTGPHLIVAPKAVLPNWMSEFSTWVPSITTVLYDGRLEERKAMK 467
TIQTISLIA+LLE KGV GP+LIVAPKAVLPNW++EF+TWVPSI LYDGRLEERKA++
Sbjct: 435 TIQTISLIAYLLENKGVPGPYLIVAPKAVLPNWVNEFATWVPSIAAFLYDGRLEERKAIR 494
Query: 468 EELSGEGKFNVLITHYDLIMRDKAFLKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQ 527
E+++GEGKFNVLITHYDLIMRDKAFLKKI W Y+IVDEGHRLKNHESALA+TL +GY I+
Sbjct: 495 EKIAGEGKFNVLITHYDLIMRDKAFLKKIEWYYMIVDEGHRLKNHESALAKTLLTGYRIK 554
Query: 528 RRLLLTGTPIQNNLQELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLII 587
RRLLLTGTPIQN+LQELWSLLNFLLP+IFNSVQNFE+WFNAPFADR +VSLTDEE+LLII
Sbjct: 555 RRLLLTGTPIQNSLQELWSLLNFLLPHIFNSVQNFEEWFNAPFADRGNVSLTDEEELLII 614
Query: 588 RRLHQVIRPFILRRKKDEVEKCLPEKSQVILKCDMSAWQKVYYQQVTDVGRVGLDNGSGK 647
RLH VIRPFILRRKKDEVEK LP K+QVILKCDMSAWQKVYY+QVTD+GRVGL GSGK
Sbjct: 615 HRLHHVIRPFILRRKKDEVEKFLPGKTQVILKCDMSAWQKVYYKQVTDMGRVGLQTGSGK 674
Query: 648 SKSLQNLTMQLRKCCNHPYLFV-GDYDMYKRKEIVRASGKFELLDRLLPKLRRAGHRVLL 706
SKSLQNLTMQLRKCCNHPYLFV GDY+M+K+ EIVRASGKFELLDRLLPKLR+AGHR+LL
Sbjct: 675 SKSLQNLTMQLRKCCNHPYLFVGGDYNMWKKPEIVRASGKFELLDRLLPKLRKAGHRILL 734
Query: 707 FSQMTRLMDVLEIYLRLHDFKYLRLDGSTKTEERGTLLKKFNAPDSPYFMFLLSTRAGGL 766
FSQMTRL+DVLEIYL L+D+KYLRLDG+TKT++RG LLK+FN PDSPYFMFLLSTRAGGL
Sbjct: 735 FSQMTRLIDVLEIYLTLNDYKYLRLDGTTKTDQRGLLLKQFNEPDSPYFMFLLSTRAGGL 794
Query: 767 GLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQK 826
GLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGS+EEVILERAKQK
Sbjct: 795 GLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEVILERAKQK 854
Query: 827 MGIDAKVIQAGLFNTTSTAQDRREMLEEIMRRGSRALGNDVPSEREINRLAARSDEEFWL 886
MGIDAKVIQAGLFNTTSTAQDRREMLEEIMR+G+ +LG DVPSEREINRLAARS++EFW+
Sbjct: 855 MGIDAKVIQAGLFNTTSTAQDRREMLEEIMRKGTSSLGTDVPSEREINRLAARSEDEFWM 914
Query: 887 FEKMDEERRQEENYRSRLMEEHELPDWVYSPLNKDDK---AKEFNASVTGKRKRKEVVYA 943
FE+MDEERR++ENYR+RLM+E E+P+W Y+ +++K K SVTGKRKRKE+VY+
Sbjct: 915 FERMDEERRRKENYRARLMQEQEVPEWAYTTQTQEEKLNNGKFHFGSVTGKRKRKEIVYS 974
Query: 944 DTLSDLQWMKAVENGEDMARLSGRGKRRDRVSSDSIAQASDNAVAEESLLYRAESASMAS 1003
DTLS+LQW+KAVE+GED+++LS R RR+ +S++ S + ES S
Sbjct: 975 DTLSELQWLKAVESGEDLSKLSMRYNRREENASNTKTSTSKKVI---------ESIQTVS 1025
Query: 1004 ERTSEEDSFHVTPASKRFKPEGTNFQRHAYEDVRGSGLN--QHLLSWNTHRKKRSNF 1058
+ TSEED + + E+ G N + + WNTH+KKRS +
Sbjct: 1026 DGTSEEDEEEQEEERAKEMSGKQRVDKSEEEEEEGEEENDGKAIFKWNTHKKKRSRY 1082
>AT5G19310.1 | Symbols: | Homeotic gene regulator |
chr5:6498906-6503432 FORWARD LENGTH=1064
Length = 1064
Score = 1372 bits (3552), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 710/1071 (66%), Positives = 839/1071 (78%), Gaps = 53/1071 (4%)
Query: 7 EEEDKKEHAKTLICALNLLSRDLPLPSHLLTSVSSIYH--------------NNHHDDVG 52
EE D E K+LI ALN LSRDL LPSHL SVSSIYH N++ + G
Sbjct: 9 EENDPVEKTKSLISALNYLSRDLLLPSHLYASVSSIYHASVSDLSPSPPLRGNSYTPNRG 68
Query: 53 DSGEGLIADLEDAVLNQRLSRVSGSKLEEARGNRYQTQIQNRLNQLQELPSSRGDDLQSK 112
D L+++ EDA+L QRL+ SGS+L E + RY+ +I NRL+QL+ LPS+RG+DLQ K
Sbjct: 69 D----LMSEFEDALLQQRLNYESGSRLAELKETRYKNRIHNRLSQLEGLPSNRGEDLQEK 124
Query: 113 CLLEYYGLKLAELQSKVRSDVSAENWLNVKCAYPDRQLFDWGMMRLRRPLYGVGDPFAMD 172
CLLE YGLKL ELQ +VR +VSAE WL + CA P+RQL+DWGMMRL R +YGVGD F M+
Sbjct: 125 CLLELYGLKLQELQCRVRGEVSAEYWLRLNCADPERQLYDWGMMRLPRRMYGVGDSFVME 184
Query: 173 ADDQLKKKRDVERLSRLEEVEKNHIETRKRKFFAEVLDTVRDFQLQIQASLKRRKQRNDG 232
ADDQ + KRD ERL RLEE EKN IET +RKFFAEVL+ VR+FQLQIQAS +R KQRNDG
Sbjct: 185 ADDQFRNKRDAERLLRLEEEEKNLIETTQRKFFAEVLNAVREFQLQIQASHRRCKQRNDG 244
Query: 233 IQAWHGRQRQRATRAEKLRFQALKSDDQEAYMRMVKESKXXXXXXXXXXXXXXXXXXGAA 292
+QAWHG+QRQRATRAEKLR ALKSDDQE YM++ KESK GAA
Sbjct: 245 VQAWHGKQRQRATRAEKLRIMALKSDDQEEYMKLAKESKNEKLTLFLEETNKIFVSLGAA 304
Query: 293 VQRQKDNKHLDGIEPLEESEADLPESDASKNGVSKESPLDEEIDSDHNGDSRDLLEGQRQ 352
VQRQKD K + + L+ SE+DL + DA ++ + + E IDSD+N DS DLLEG+RQ
Sbjct: 305 VQRQKDAKLSENTKLLKGSESDLSDVDAPEDVLPAQDI--EIIDSDNNDDSNDLLEGERQ 362
Query: 353 YNSAIHSIQEKITEQPSILQGGELRQYQIEGLQWMISLFNNNLNGILADEMGLGKTIQTI 412
+N AIHSIQEK+T+QPS+LQGGELR YQ+EGLQWM+SL+NN+ NGILADEMGLGKTIQTI
Sbjct: 363 FNLAIHSIQEKVTKQPSLLQGGELRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTI 422
Query: 413 SLIAHLLEYKGVTGPHLIVAPKAVLPNWMSEFSTWVPSITTVLYDGRLEERKAMKEELSG 472
+LIA+LLE K + GPHLI+APKAVLPNW +EF+ W PSI+ LYDG E+R ++ ++G
Sbjct: 423 ALIAYLLESKDLHGPHLILAPKAVLPNWENEFALWAPSISAFLYDGSKEKRTEIRARIAG 482
Query: 473 EGKFNVLITHYDLIMRDKAFLKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLLL 532
GKFNVLITHYDLIMRDKAFLKKI W Y+IVDEGHRLKNHE ALA+TL +GY I+RRLLL
Sbjct: 483 -GKFNVLITHYDLIMRDKAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGYRIKRRLLL 541
Query: 533 TGTPIQNNLQELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQ 592
TGTPIQN+LQELWSLLNFLLP+IFNS+ NFE+WFN PFA+ SLTDEE+LLII RLH
Sbjct: 542 TGTPIQNSLQELWSLLNFLLPHIFNSIHNFEEWFNTPFAECGSASLTDEEELLIINRLHH 601
Query: 593 VIRPFILRRKKDEVEKCLPEKSQVILKCDMSAWQKVYYQQVTDVGRVGLDNGSGKSKSLQ 652
VIRPF+LRRKK EVEK LP K+QVILKCDMSAWQK+YY+QVTDVGRVGL +G+GKSKSLQ
Sbjct: 602 VIRPFLLRRKKSEVEKFLPGKTQVILKCDMSAWQKLYYKQVTDVGRVGLHSGNGKSKSLQ 661
Query: 653 NLTMQLRKCCNHPYLFVG-DYDMYKRKEIVRASGKFELLDRLLPKLRRAGHRVLLFSQMT 711
NLTMQLRKCCNHPYLFVG DY+M K+ EIVRASGKFELLDRLLPKL++AGHR+LLFSQMT
Sbjct: 662 NLTMQLRKCCNHPYLFVGADYNMCKKPEIVRASGKFELLDRLLPKLKKAGHRILLFSQMT 721
Query: 712 RLMDVLEIYLRLHDFKYLRLDGSTKTEERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQ 771
RL+D+LEIYL L+D+ YLRLDGSTKT++RG LLK+FN PDSPYFMFLLSTRAGGLGLNLQ
Sbjct: 722 RLIDLLEIYLSLNDYMYLRLDGSTKTDQRGILLKQFNEPDSPYFMFLLSTRAGGLGLNLQ 781
Query: 772 TADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDA 831
TADT+IIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVS+GSIEEVILERAKQKMGIDA
Sbjct: 782 TADTIIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSIGSIEEVILERAKQKMGIDA 841
Query: 832 KVIQAGLFNTTSTAQDRREMLEEIMRRGSRALGNDVPSEREINRLAARSDEEFWLFEKMD 891
KVIQAGLFNTTSTAQDRREMLEEIM +G+ +LG DVPSEREINRLAAR++EEFW+FE+MD
Sbjct: 842 KVIQAGLFNTTSTAQDRREMLEEIMSKGTSSLGEDVPSEREINRLAARTEEEFWMFEQMD 901
Query: 892 EERRQEENYRSRLMEEHELPDWVYSPLNKDDK--AKEFNASVTGKRKRKEVVYADTLSDL 949
EERR++ENY++RLMEE E+P+W Y+ ++DK AK S+TGKRKRKE VY+D+LSDL
Sbjct: 902 EERRKKENYKTRLMEEKEVPEWAYTSETQEDKTNAKNHFGSLTGKRKRKEAVYSDSLSDL 961
Query: 950 QWMKAVEN-GEDMARLSGRGKRRDRVSSDSIAQASDNAVAEESLLYRAESASMASERTSE 1008
QWMKA+E+ ED +++S + KR D + S ++ ++E E E E
Sbjct: 962 QWMKAMESEDEDASKVSQKRKRTDTKTRMSNGSKAEAVLSESDEEKEEEEEERKEESGKE 1021
Query: 1009 EDSFHVTPASKRFKPEGTNFQRHAYEDVRGSGLNQHLLSWNTHRKKRSNFP 1059
+ + P L SW T++KKRS +P
Sbjct: 1022 SEEENEKP----------------------------LHSWKTNKKKRSRYP 1044
>AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3529
Length = 3529
Score = 578 bits (1490), Expect = e-165, Method: Compositional matrix adjust.
Identities = 326/765 (42%), Positives = 465/765 (60%), Gaps = 45/765 (5%)
Query: 162 LYGVGDPFAMDAD--DQLKKKRDVERLSRLEEVE---KNHIETRKRKFFAEVLDTVRDFQ 216
+Y P A D + KK + R+ +LE+ E K + R R+ E + +
Sbjct: 539 VYNFFKPIATDVEHLKSYKKHKHGRRIKQLEKYEQKMKEERQRRIRERQKEFFGGLEVHK 598
Query: 217 LQIQASLKRRKQRNDGI----QAWHGRQ----RQRATRAEKLRFQALKSDDQEAYMRMVK 268
+++ K R++R G + +H R+ R++ + ++ + LK +D E Y+RMV+
Sbjct: 599 EKLEDLFKVRRERLKGFNRYAKEFHKRKERLHREKIDKIQREKINLLKINDVEGYLRMVQ 658
Query: 269 ESKXXXXXXXXXXXXXXXXXXGAAVQRQKDNKHLDGIEPLEESEADLPESDASKNGVSKE 328
++K G+ ++ K + E+EAD + N E
Sbjct: 659 DAKSDRVKQLLKETEKYLQKLGSKLKEAK------LLTSRFENEAD---ETRTSNATDDE 709
Query: 329 SPLDEEIDSDHNGDSRDLLEGQRQYNSAIHSIQEKITEQPSILQGGELRQYQIEGLQWMI 388
+ ++ E +SD ++ LE +Y HSI+E I EQPS L GG+LR+YQ+ GL+W++
Sbjct: 710 TLIENEDESDQ---AKHYLESNEKYYLMAHSIKENINEQPSSLVGGKLREYQMNGLRWLV 766
Query: 389 SLFNNNLNGILADEMGLGKTIQTISLIAHLLEYKGVTGPHLIVAPKAVLPNWMSEFSTWV 448
SL+NN+LNGILADEMGLGKT+Q ISLI +L+E K GP L+V P +VLP W SE + W
Sbjct: 767 SLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPSSVLPGWQSEINFWA 826
Query: 449 PSITTVLYDGRLEERKAMKEELSGEGKFNVLITHYDLIM--RDKAFLKKIHWRYLIVDEG 506
PSI ++Y G +ER+ + +E KFNVL+T Y+ +M D+ L KIHW Y+I+DEG
Sbjct: 827 PSIHKIVYCGTPDERRKLFKEQIVHQKFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEG 886
Query: 507 HRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQELWSLLNFLLPNIFNSVQNFEDWF 566
HR+KN L L Y RLLLTGTP+QNNL+ELW+LLNFLLPNIFNS ++F WF
Sbjct: 887 HRIKNASCKLNADLKH-YVSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWF 945
Query: 567 NAPFADR-----VDVSLTDEEQLLIIRRLHQVIRPFILRRKKDEVEKCLPEKSQVILKCD 621
N PF + L++EE LLII RLHQV+RPF+LRR K +VE LPEK + +++C+
Sbjct: 946 NKPFQSNGESSAEEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRCE 1005
Query: 622 MSAWQKVYYQQVTD-VGRVGLDNGSGKSKSLQNLTMQLRKCCNHPYLFVGDYDMYKR--- 677
SA+QK+ ++V D +G +G + KS+++ N M+LR CNHPYL +
Sbjct: 1006 ASAYQKLLMKRVEDNLGSIG----NAKSRAVHNSVMELRNICNHPYLSQLHSEEVNNIIP 1061
Query: 678 ----KEIVRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDVLEIYLRLHDFKYLRLDG 733
IVR GK E+LDR+LPKL+ HRVL FS MTRL+DV+E YL L +KYLRLDG
Sbjct: 1062 KHFLPPIVRLCGKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDG 1121
Query: 734 STKTEERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAED 793
T +RG L+ FN SP+F+FLLS RAGG+G+NLQ ADTVI+FD+DWNPQ+D QA+
Sbjct: 1122 QTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQA 1181
Query: 794 RAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLE 853
RAHRIGQKK+V V +V S+EE + A+ K+G+ + I AG F+ ++A+DR+E LE
Sbjct: 1182 RAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRKEYLE 1241
Query: 854 EIMRRGSRALGNDVPSEREINRLAARSDEEFWLFEKMDEERRQEE 898
++R + V + +N L AR + E +FE +D++R++ E
Sbjct: 1242 SLLRESKKEEDAPVLDDDALNDLIARRESEIDIFESIDKQRKENE 1286
>AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3543
Length = 3543
Score = 578 bits (1490), Expect = e-165, Method: Compositional matrix adjust.
Identities = 326/765 (42%), Positives = 465/765 (60%), Gaps = 45/765 (5%)
Query: 162 LYGVGDPFAMDAD--DQLKKKRDVERLSRLEEVE---KNHIETRKRKFFAEVLDTVRDFQ 216
+Y P A D + KK + R+ +LE+ E K + R R+ E + +
Sbjct: 539 VYNFFKPIATDVEHLKSYKKHKHGRRIKQLEKYEQKMKEERQRRIRERQKEFFGGLEVHK 598
Query: 217 LQIQASLKRRKQRNDGI----QAWHGRQ----RQRATRAEKLRFQALKSDDQEAYMRMVK 268
+++ K R++R G + +H R+ R++ + ++ + LK +D E Y+RMV+
Sbjct: 599 EKLEDLFKVRRERLKGFNRYAKEFHKRKERLHREKIDKIQREKINLLKINDVEGYLRMVQ 658
Query: 269 ESKXXXXXXXXXXXXXXXXXXGAAVQRQKDNKHLDGIEPLEESEADLPESDASKNGVSKE 328
++K G+ ++ K + E+EAD + N E
Sbjct: 659 DAKSDRVKQLLKETEKYLQKLGSKLKEAK------LLTSRFENEAD---ETRTSNATDDE 709
Query: 329 SPLDEEIDSDHNGDSRDLLEGQRQYNSAIHSIQEKITEQPSILQGGELRQYQIEGLQWMI 388
+ ++ E +SD ++ LE +Y HSI+E I EQPS L GG+LR+YQ+ GL+W++
Sbjct: 710 TLIENEDESDQ---AKHYLESNEKYYLMAHSIKENINEQPSSLVGGKLREYQMNGLRWLV 766
Query: 389 SLFNNNLNGILADEMGLGKTIQTISLIAHLLEYKGVTGPHLIVAPKAVLPNWMSEFSTWV 448
SL+NN+LNGILADEMGLGKT+Q ISLI +L+E K GP L+V P +VLP W SE + W
Sbjct: 767 SLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPSSVLPGWQSEINFWA 826
Query: 449 PSITTVLYDGRLEERKAMKEELSGEGKFNVLITHYDLIM--RDKAFLKKIHWRYLIVDEG 506
PSI ++Y G +ER+ + +E KFNVL+T Y+ +M D+ L KIHW Y+I+DEG
Sbjct: 827 PSIHKIVYCGTPDERRKLFKEQIVHQKFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEG 886
Query: 507 HRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQELWSLLNFLLPNIFNSVQNFEDWF 566
HR+KN L L Y RLLLTGTP+QNNL+ELW+LLNFLLPNIFNS ++F WF
Sbjct: 887 HRIKNASCKLNADLKH-YVSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWF 945
Query: 567 NAPFADR-----VDVSLTDEEQLLIIRRLHQVIRPFILRRKKDEVEKCLPEKSQVILKCD 621
N PF + L++EE LLII RLHQV+RPF+LRR K +VE LPEK + +++C+
Sbjct: 946 NKPFQSNGESSAEEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRCE 1005
Query: 622 MSAWQKVYYQQVTD-VGRVGLDNGSGKSKSLQNLTMQLRKCCNHPYLFVGDYDMYKR--- 677
SA+QK+ ++V D +G +G + KS+++ N M+LR CNHPYL +
Sbjct: 1006 ASAYQKLLMKRVEDNLGSIG----NAKSRAVHNSVMELRNICNHPYLSQLHSEEVNNIIP 1061
Query: 678 ----KEIVRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDVLEIYLRLHDFKYLRLDG 733
IVR GK E+LDR+LPKL+ HRVL FS MTRL+DV+E YL L +KYLRLDG
Sbjct: 1062 KHFLPPIVRLCGKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDG 1121
Query: 734 STKTEERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAED 793
T +RG L+ FN SP+F+FLLS RAGG+G+NLQ ADTVI+FD+DWNPQ+D QA+
Sbjct: 1122 QTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQA 1181
Query: 794 RAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLE 853
RAHRIGQKK+V V +V S+EE + A+ K+G+ + I AG F+ ++A+DR+E LE
Sbjct: 1182 RAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRKEYLE 1241
Query: 854 EIMRRGSRALGNDVPSEREINRLAARSDEEFWLFEKMDEERRQEE 898
++R + V + +N L AR + E +FE +D++R++ E
Sbjct: 1242 SLLRESKKEEDAPVLDDDALNDLIARRESEIDIFESIDKQRKENE 1286
>AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3574
Length = 3574
Score = 578 bits (1489), Expect = e-165, Method: Compositional matrix adjust.
Identities = 326/765 (42%), Positives = 465/765 (60%), Gaps = 45/765 (5%)
Query: 162 LYGVGDPFAMDAD--DQLKKKRDVERLSRLEEVE---KNHIETRKRKFFAEVLDTVRDFQ 216
+Y P A D + KK + R+ +LE+ E K + R R+ E + +
Sbjct: 539 VYNFFKPIATDVEHLKSYKKHKHGRRIKQLEKYEQKMKEERQRRIRERQKEFFGGLEVHK 598
Query: 217 LQIQASLKRRKQRNDGI----QAWHGRQ----RQRATRAEKLRFQALKSDDQEAYMRMVK 268
+++ K R++R G + +H R+ R++ + ++ + LK +D E Y+RMV+
Sbjct: 599 EKLEDLFKVRRERLKGFNRYAKEFHKRKERLHREKIDKIQREKINLLKINDVEGYLRMVQ 658
Query: 269 ESKXXXXXXXXXXXXXXXXXXGAAVQRQKDNKHLDGIEPLEESEADLPESDASKNGVSKE 328
++K G+ ++ K + E+EAD + N E
Sbjct: 659 DAKSDRVKQLLKETEKYLQKLGSKLKEAK------LLTSRFENEAD---ETRTSNATDDE 709
Query: 329 SPLDEEIDSDHNGDSRDLLEGQRQYNSAIHSIQEKITEQPSILQGGELRQYQIEGLQWMI 388
+ ++ E +SD ++ LE +Y HSI+E I EQPS L GG+LR+YQ+ GL+W++
Sbjct: 710 TLIENEDESDQ---AKHYLESNEKYYLMAHSIKENINEQPSSLVGGKLREYQMNGLRWLV 766
Query: 389 SLFNNNLNGILADEMGLGKTIQTISLIAHLLEYKGVTGPHLIVAPKAVLPNWMSEFSTWV 448
SL+NN+LNGILADEMGLGKT+Q ISLI +L+E K GP L+V P +VLP W SE + W
Sbjct: 767 SLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPSSVLPGWQSEINFWA 826
Query: 449 PSITTVLYDGRLEERKAMKEELSGEGKFNVLITHYDLIM--RDKAFLKKIHWRYLIVDEG 506
PSI ++Y G +ER+ + +E KFNVL+T Y+ +M D+ L KIHW Y+I+DEG
Sbjct: 827 PSIHKIVYCGTPDERRKLFKEQIVHQKFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEG 886
Query: 507 HRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQELWSLLNFLLPNIFNSVQNFEDWF 566
HR+KN L L Y RLLLTGTP+QNNL+ELW+LLNFLLPNIFNS ++F WF
Sbjct: 887 HRIKNASCKLNADLKH-YVSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWF 945
Query: 567 NAPFADR-----VDVSLTDEEQLLIIRRLHQVIRPFILRRKKDEVEKCLPEKSQVILKCD 621
N PF + L++EE LLII RLHQV+RPF+LRR K +VE LPEK + +++C+
Sbjct: 946 NKPFQSNGESSAEEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRCE 1005
Query: 622 MSAWQKVYYQQVTD-VGRVGLDNGSGKSKSLQNLTMQLRKCCNHPYLFVGDYDMYKR--- 677
SA+QK+ ++V D +G +G + KS+++ N M+LR CNHPYL +
Sbjct: 1006 ASAYQKLLMKRVEDNLGSIG----NAKSRAVHNSVMELRNICNHPYLSQLHSEEVNNIIP 1061
Query: 678 ----KEIVRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDVLEIYLRLHDFKYLRLDG 733
IVR GK E+LDR+LPKL+ HRVL FS MTRL+DV+E YL L +KYLRLDG
Sbjct: 1062 KHFLPPIVRLCGKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDG 1121
Query: 734 STKTEERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAED 793
T +RG L+ FN SP+F+FLLS RAGG+G+NLQ ADTVI+FD+DWNPQ+D QA+
Sbjct: 1122 QTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQA 1181
Query: 794 RAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLE 853
RAHRIGQKK+V V +V S+EE + A+ K+G+ + I AG F+ ++A+DR+E LE
Sbjct: 1182 RAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDRKEYLE 1241
Query: 854 EIMRRGSRALGNDVPSEREINRLAARSDEEFWLFEKMDEERRQEE 898
++R + V + +N L AR + E +FE +D++R++ E
Sbjct: 1242 SLLRESKKEEDAPVLDDDALNDLIARRESEIDIFESIDKQRKENE 1286
>AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2193
Length = 2193
Score = 508 bits (1307), Expect = e-143, Method: Compositional matrix adjust.
Identities = 281/651 (43%), Positives = 402/651 (61%), Gaps = 67/651 (10%)
Query: 352 QYNSAIHSIQEKITEQPSILQGGELRQYQIEGLQWMISLFNNNLNGILADEMGLGKTIQT 411
+Y + H++ E + QPS+LQ G LR YQ+ GLQWM+SL+NN LNGILADEMGLGKT+Q
Sbjct: 957 KYYTLAHAVNEVVVRQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQV 1016
Query: 412 ISLIAHLLEYKGVTGPHLIVAPKAVLPNWMSEFSTWVPSITTVLYDGRLEERKAMKEELS 471
++LIA+L+E+KG GPHLI+ P AVL NW SE TW+PS++ + Y G ++R + +
Sbjct: 1017 MALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQEV 1076
Query: 472 GEGKFNVLITHYDLIMRDKAFLKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLL 531
KFNVL+T Y+ IM D++ L K+ W+Y+I+DE R+K+ ES LAR LD Y QRRLL
Sbjct: 1077 CAMKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDR-YRCQRRLL 1135
Query: 532 LTGTPIQNNLQELWSLLNFLLPNIFNSVQNFEDWFNAPF-----ADRV-DVSLTDEEQLL 585
LTGTP+QN+L+ELWSLLN LLP++F++ + F DWF PF A + D L E++++
Sbjct: 1136 LTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVI 1195
Query: 586 IIRRLHQVIRPFILRRKKDEVEKCLPEKSQVILKCDMSAWQKVYYQQVTDVGRVGLDNGS 645
+I RLHQ++ PF+LRR+ ++VE LP K V+L+C MSA Q Y + G + +D
Sbjct: 1196 VIHRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDD 1255
Query: 646 GK-------------SKSLQNLTMQLRKCCNHPYLFVGDYDMYKRKEIVRASGKFELLDR 692
K ++L N M+LRK CNHP L ++ + + +VR+ GK +LDR
Sbjct: 1256 EKLRAQKNPIYQAKIYRTLNNRCMELRKACNHPLLNYPYFNDFSKDFLVRSCGKLWILDR 1315
Query: 693 LLPKLRRAGHRVLLFSQMTRLMDVLEIYLRLHDFKYLRLDGSTKTEERGTLLKKFNAPDS 752
+L KL+R GHRVLLFS MT+L+D+LE YL+ Y R+DG+T E+R + + FN PD+
Sbjct: 1316 ILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDT 1375
Query: 753 PYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSV 812
F+FLLS RA G GLNLQTADTV+I+D D NP+ ++QA RAHRIGQ +EV+V + +V
Sbjct: 1376 DCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVIYMEAV 1435
Query: 813 --------------------------------GSIEEVILERAKQ-KMGIDAKVIQAGLF 839
GSIE +I +Q K+ + +VI AG F
Sbjct: 1436 VEKLSSHQKEDELRSGGSVDLEDDMAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRF 1495
Query: 840 NTTSTAQDRREMLEEIMRRGSR--ALGNDVPSEREINRLAARSDEEFWLFEKMDEERRQE 897
+ +T ++RR LE ++ R +DVPS E+NR+ ARS+EE LF++MDEE
Sbjct: 1496 DQRTTHEERRMTLETLLHDEERYQETVHDVPSLHEVNRMIARSEEEVELFDQMDEEF--- 1552
Query: 898 ENYRSRLMEEHELPDWVYSPLNKDDKAKEFNASVT--GKRKRKEVVYADTL 946
++ + ++P W+ + +E NA+V K+ K ++ + L
Sbjct: 1553 -DWTEEMTNHEQVPKWLRA------STREVNATVADLSKKPSKNMLSSSNL 1596
>AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2192
Length = 2192
Score = 508 bits (1307), Expect = e-143, Method: Compositional matrix adjust.
Identities = 282/651 (43%), Positives = 404/651 (62%), Gaps = 68/651 (10%)
Query: 352 QYNSAIHSIQEKITEQPSILQGGELRQYQIEGLQWMISLFNNNLNGILADEMGLGKTIQT 411
+Y + H++ E + QPS+LQ G LR YQ+ GLQWM+SL+NN LNGILADEMGLGKT+Q
Sbjct: 957 KYYTLAHAVNEVVVRQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQV 1016
Query: 412 ISLIAHLLEYKGVTGPHLIVAPKAVLPNWMSEFSTWVPSITTVLYDGRLEERKAMKEELS 471
++LIA+L+E+KG GPHLI+ P AVL NW SE TW+PS++ + Y G ++R + ++
Sbjct: 1017 MALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQVK 1076
Query: 472 GEGKFNVLITHYDLIMRDKAFLKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLL 531
E KFNVL+T Y+ IM D++ L K+ W+Y+I+DE R+K+ ES LAR LD Y QRRLL
Sbjct: 1077 FE-KFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDR-YRCQRRLL 1134
Query: 532 LTGTPIQNNLQELWSLLNFLLPNIFNSVQNFEDWFNAPF-----ADRV-DVSLTDEEQLL 585
LTGTP+QN+L+ELWSLLN LLP++F++ + F DWF PF A + D L E++++
Sbjct: 1135 LTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVI 1194
Query: 586 IIRRLHQVIRPFILRRKKDEVEKCLPEKSQVILKCDMSAWQKVYYQQVTDVGRVGLDNGS 645
+I RLHQ++ PF+LRR+ ++VE LP K V+L+C MSA Q Y + G + +D
Sbjct: 1195 VIHRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDD 1254
Query: 646 GK-------------SKSLQNLTMQLRKCCNHPYLFVGDYDMYKRKEIVRASGKFELLDR 692
K ++L N M+LRK CNHP L ++ + + +VR+ GK +LDR
Sbjct: 1255 EKLRAQKNPIYQAKIYRTLNNRCMELRKACNHPLLNYPYFNDFSKDFLVRSCGKLWILDR 1314
Query: 693 LLPKLRRAGHRVLLFSQMTRLMDVLEIYLRLHDFKYLRLDGSTKTEERGTLLKKFNAPDS 752
+L KL+R GHRVLLFS MT+L+D+LE YL+ Y R+DG+T E+R + + FN PD+
Sbjct: 1315 ILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDT 1374
Query: 753 PYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSV 812
F+FLLS RA G GLNLQTADTV+I+D D NP+ ++QA RAHRIGQ +EV+V + +V
Sbjct: 1375 DCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVIYMEAV 1434
Query: 813 --------------------------------GSIEEVILERAKQ-KMGIDAKVIQAGLF 839
GSIE +I +Q K+ + +VI AG F
Sbjct: 1435 VEKLSSHQKEDELRSGGSVDLEDDMAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRF 1494
Query: 840 NTTSTAQDRREMLEEIMRRGSR--ALGNDVPSEREINRLAARSDEEFWLFEKMDEERRQE 897
+ +T ++RR LE ++ R +DVPS E+NR+ ARS+EE LF++MDEE
Sbjct: 1495 DQRTTHEERRMTLETLLHDEERYQETVHDVPSLHEVNRMIARSEEEVELFDQMDEEF--- 1551
Query: 898 ENYRSRLMEEHELPDWVYSPLNKDDKAKEFNASVT--GKRKRKEVVYADTL 946
++ + ++P W+ + +E NA+V K+ K ++ + L
Sbjct: 1552 -DWTEEMTNHEQVPKWLRA------STREVNATVADLSKKPSKNMLSSSNL 1595
>AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1072
Length = 1072
Score = 484 bits (1247), Expect = e-136, Method: Compositional matrix adjust.
Identities = 248/526 (47%), Positives = 359/526 (68%), Gaps = 20/526 (3%)
Query: 363 KITEQPSILQGGELRQYQIEGLQWMISLFNNNLNGILADEMGLGKTIQTISLIAHLLEYK 422
++ QP+ +QG +LR YQ+ GL W+I L+ N +NGILADEMGLGKT+QTISL+A+L EY+
Sbjct: 182 RLLTQPACIQG-KLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYR 240
Query: 423 GVTGPHLIVAPKAVLPNWMSEFSTWVPSITTVLYDGRLEERKAMKEELSGEGKFNVLITH 482
G+ GPH++VAPK+ L NWM+E + P + V + G EER+ ++EEL GKF++ +T
Sbjct: 241 GINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELLVAGKFDICVTS 300
Query: 483 YDLIMRDKAFLKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQ 542
+++ +++K L++ WRY+I+DE HR+KN S L++T+ + RLL+TGTP+QNNL
Sbjct: 301 FEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTM-RLFSTNYRLLITGTPLQNNLH 359
Query: 543 ELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRK 602
ELW+LLNFLLP +F+S + F++WF + +Q ++++LH+V+RPF+LRR
Sbjct: 360 ELWALLNFLLPEVFSSAETFDEWFQIS---------GENDQQEVVQQLHKVLRPFLLRRL 410
Query: 603 KDEVEKCLPEKSQVILKCDMSAWQKVYYQQVTDVGRVGLDNGSGKSKSLQNLTMQLRKCC 662
K +VEK LP K + ILK MS QK YY+ + + + NG G+ K L N+ MQLRKCC
Sbjct: 411 KSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKD-LEVVNGGGERKRLLNIAMQLRKCC 469
Query: 663 NHPYLFVG---DYDMYKRKEIVRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDVLEI 719
NHPYLF G +V +GK LLD+LLPKL+ RVL+FSQMTRL+D+LE
Sbjct: 470 NHPYLFQGAEPGPPYTTGDHLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILED 529
Query: 720 YLRLHDFKYLRLDGSTKTEERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIF 779
YL ++Y R+DG+T +ER ++ +N P S F+FLLSTRAGGLG+NL TAD VI++
Sbjct: 530 YLMYRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILY 589
Query: 780 DSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLF 839
DSDWNPQ+D QA+DRAHRIGQKKEV+VF + +IE ++ERA +K+ +DA VIQ G
Sbjct: 590 DSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQQGRL 649
Query: 840 NTTSTAQDRREMLEEIMRRGSRAL---GNDVPSEREINRLAARSDE 882
T ++ L +++R G+ + + ++ +I+R+ A+ +E
Sbjct: 650 AEQKTVN--KDELLQMVRYGAEMVFSSKDSTITDEDIDRIIAKGEE 693
>AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1069
Length = 1069
Score = 484 bits (1246), Expect = e-136, Method: Compositional matrix adjust.
Identities = 248/526 (47%), Positives = 359/526 (68%), Gaps = 20/526 (3%)
Query: 363 KITEQPSILQGGELRQYQIEGLQWMISLFNNNLNGILADEMGLGKTIQTISLIAHLLEYK 422
++ QP+ +QG +LR YQ+ GL W+I L+ N +NGILADEMGLGKT+QTISL+A+L EY+
Sbjct: 182 RLLTQPACIQG-KLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYR 240
Query: 423 GVTGPHLIVAPKAVLPNWMSEFSTWVPSITTVLYDGRLEERKAMKEELSGEGKFNVLITH 482
G+ GPH++VAPK+ L NWM+E + P + V + G EER+ ++EEL GKF++ +T
Sbjct: 241 GINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELLVAGKFDICVTS 300
Query: 483 YDLIMRDKAFLKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQ 542
+++ +++K L++ WRY+I+DE HR+KN S L++T+ + RLL+TGTP+QNNL
Sbjct: 301 FEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTM-RLFSTNYRLLITGTPLQNNLH 359
Query: 543 ELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRK 602
ELW+LLNFLLP +F+S + F++WF + +Q ++++LH+V+RPF+LRR
Sbjct: 360 ELWALLNFLLPEVFSSAETFDEWFQIS---------GENDQQEVVQQLHKVLRPFLLRRL 410
Query: 603 KDEVEKCLPEKSQVILKCDMSAWQKVYYQQVTDVGRVGLDNGSGKSKSLQNLTMQLRKCC 662
K +VEK LP K + ILK MS QK YY+ + + + NG G+ K L N+ MQLRKCC
Sbjct: 411 KSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKD-LEVVNGGGERKRLLNIAMQLRKCC 469
Query: 663 NHPYLFVG---DYDMYKRKEIVRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDVLEI 719
NHPYLF G +V +GK LLD+LLPKL+ RVL+FSQMTRL+D+LE
Sbjct: 470 NHPYLFQGAEPGPPYTTGDHLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILED 529
Query: 720 YLRLHDFKYLRLDGSTKTEERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIF 779
YL ++Y R+DG+T +ER ++ +N P S F+FLLSTRAGGLG+NL TAD VI++
Sbjct: 530 YLMYRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILY 589
Query: 780 DSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLF 839
DSDWNPQ+D QA+DRAHRIGQKKEV+VF + +IE ++ERA +K+ +DA VIQ G
Sbjct: 590 DSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVIQQGRL 649
Query: 840 NTTSTAQDRREMLEEIMRRGSRAL---GNDVPSEREINRLAARSDE 882
T ++ L +++R G+ + + ++ +I+R+ A+ +E
Sbjct: 650 AEQKTVN--KDELLQMVRYGAEMVFSSKDSTITDEDIDRIIAKGEE 693
>AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1055
Length = 1055
Score = 483 bits (1243), Expect = e-136, Method: Compositional matrix adjust.
Identities = 249/528 (47%), Positives = 359/528 (67%), Gaps = 24/528 (4%)
Query: 363 KITEQPSILQGGELRQYQIEGLQWMISLFNNNLNGILADEMGLGKTIQTISLIAHLLEYK 422
++ QPS +QG ++R YQ+ GL W+I L+ N +NGILADEMGLGKT+QTISL+A+L EY+
Sbjct: 177 RLLTQPSCIQG-KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYR 235
Query: 423 GVTGPHLIVAPKAVLPNWMSEFSTWVPSITTVLYDGRLEERKAMKEELSGEGKFNVLITH 482
G+ GPH++VAPK+ L NWM+E + P + V + G EER+ ++E+L GKF++ +T
Sbjct: 236 GINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGKFDICVTS 295
Query: 483 YDLIMRDKAFLKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQ 542
+++ +++K L++ WRY+I+DE HR+KN S L++T+ + RLL+TGTP+QNNL
Sbjct: 296 FEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTM-RLFSTNYRLLITGTPLQNNLH 354
Query: 543 ELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRK 602
ELW+LLNFLLP IF+S + F++WF + +Q ++++LH+V+RPF+LRR
Sbjct: 355 ELWALLNFLLPEIFSSAETFDEWFQIS---------GENDQQEVVQQLHKVLRPFLLRRL 405
Query: 603 KDEVEKCLPEKSQVILKCDMSAWQKVYYQQV--TDVGRVGLDNGSGKSKSLQNLTMQLRK 660
K +VEK LP K + ILK MS QK YY+ + D+ V N G+ K L N+ MQLRK
Sbjct: 406 KSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAV---NAGGERKRLLNIAMQLRK 462
Query: 661 CCNHPYLFVG---DYDMYKRKEIVRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDVL 717
CCNHPYLF G ++ +GK LLD+LLPKL+ RVL+FSQMTRL+D+L
Sbjct: 463 CCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDIL 522
Query: 718 EIYLRLHDFKYLRLDGSTKTEERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVI 777
E YL + Y R+DG+T +ER ++ +N P S F+FLLSTRAGGLG+NL TAD VI
Sbjct: 523 EDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVI 582
Query: 778 IFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAG 837
++DSDWNPQ+D QA+DRAHRIGQKKEV+VF + +IEE ++ERA +K+ +DA VIQ G
Sbjct: 583 LYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQG 642
Query: 838 LFNTTSTAQDRREMLEEIMRRGSRAL---GNDVPSEREINRLAARSDE 882
T ++ L +++R G+ + + ++ +I+R+ A+ +E
Sbjct: 643 RLAEQKTVN--KDELLQMVRYGAEMVFSSKDSTITDEDIDRIIAKGEE 688
>AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1057
Length = 1057
Score = 483 bits (1243), Expect = e-136, Method: Compositional matrix adjust.
Identities = 249/528 (47%), Positives = 359/528 (67%), Gaps = 24/528 (4%)
Query: 363 KITEQPSILQGGELRQYQIEGLQWMISLFNNNLNGILADEMGLGKTIQTISLIAHLLEYK 422
++ QPS +QG ++R YQ+ GL W+I L+ N +NGILADEMGLGKT+QTISL+A+L EY+
Sbjct: 177 RLLTQPSCIQG-KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYR 235
Query: 423 GVTGPHLIVAPKAVLPNWMSEFSTWVPSITTVLYDGRLEERKAMKEELSGEGKFNVLITH 482
G+ GPH++VAPK+ L NWM+E + P + V + G EER+ ++E+L GKF++ +T
Sbjct: 236 GINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGKFDICVTS 295
Query: 483 YDLIMRDKAFLKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQ 542
+++ +++K L++ WRY+I+DE HR+KN S L++T+ + RLL+TGTP+QNNL
Sbjct: 296 FEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTM-RLFSTNYRLLITGTPLQNNLH 354
Query: 543 ELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRK 602
ELW+LLNFLLP IF+S + F++WF + +Q ++++LH+V+RPF+LRR
Sbjct: 355 ELWALLNFLLPEIFSSAETFDEWFQIS---------GENDQQEVVQQLHKVLRPFLLRRL 405
Query: 603 KDEVEKCLPEKSQVILKCDMSAWQKVYYQQV--TDVGRVGLDNGSGKSKSLQNLTMQLRK 660
K +VEK LP K + ILK MS QK YY+ + D+ V N G+ K L N+ MQLRK
Sbjct: 406 KSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAV---NAGGERKRLLNIAMQLRK 462
Query: 661 CCNHPYLFVG---DYDMYKRKEIVRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDVL 717
CCNHPYLF G ++ +GK LLD+LLPKL+ RVL+FSQMTRL+D+L
Sbjct: 463 CCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDIL 522
Query: 718 EIYLRLHDFKYLRLDGSTKTEERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVI 777
E YL + Y R+DG+T +ER ++ +N P S F+FLLSTRAGGLG+NL TAD VI
Sbjct: 523 EDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVI 582
Query: 778 IFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAG 837
++DSDWNPQ+D QA+DRAHRIGQKKEV+VF + +IEE ++ERA +K+ +DA VIQ G
Sbjct: 583 LYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQG 642
Query: 838 LFNTTSTAQDRREMLEEIMRRGSRAL---GNDVPSEREINRLAARSDE 882
T ++ L +++R G+ + + ++ +I+R+ A+ +E
Sbjct: 643 RLAEQKTVN--KDELLQMVRYGAEMVFSSKDSTITDEDIDRIIAKGEE 688
>AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1056
Length = 1056
Score = 483 bits (1243), Expect = e-136, Method: Compositional matrix adjust.
Identities = 249/528 (47%), Positives = 359/528 (67%), Gaps = 24/528 (4%)
Query: 363 KITEQPSILQGGELRQYQIEGLQWMISLFNNNLNGILADEMGLGKTIQTISLIAHLLEYK 422
++ QPS +QG ++R YQ+ GL W+I L+ N +NGILADEMGLGKT+QTISL+A+L EY+
Sbjct: 177 RLLTQPSCIQG-KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYR 235
Query: 423 GVTGPHLIVAPKAVLPNWMSEFSTWVPSITTVLYDGRLEERKAMKEELSGEGKFNVLITH 482
G+ GPH++VAPK+ L NWM+E + P + V + G EER+ ++E+L GKF++ +T
Sbjct: 236 GINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGKFDICVTS 295
Query: 483 YDLIMRDKAFLKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQ 542
+++ +++K L++ WRY+I+DE HR+KN S L++T+ + RLL+TGTP+QNNL
Sbjct: 296 FEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTM-RLFSTNYRLLITGTPLQNNLH 354
Query: 543 ELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRK 602
ELW+LLNFLLP IF+S + F++WF + +Q ++++LH+V+RPF+LRR
Sbjct: 355 ELWALLNFLLPEIFSSAETFDEWFQIS---------GENDQQEVVQQLHKVLRPFLLRRL 405
Query: 603 KDEVEKCLPEKSQVILKCDMSAWQKVYYQQV--TDVGRVGLDNGSGKSKSLQNLTMQLRK 660
K +VEK LP K + ILK MS QK YY+ + D+ V N G+ K L N+ MQLRK
Sbjct: 406 KSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAV---NAGGERKRLLNIAMQLRK 462
Query: 661 CCNHPYLFVG---DYDMYKRKEIVRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDVL 717
CCNHPYLF G ++ +GK LLD+LLPKL+ RVL+FSQMTRL+D+L
Sbjct: 463 CCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDIL 522
Query: 718 EIYLRLHDFKYLRLDGSTKTEERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVI 777
E YL + Y R+DG+T +ER ++ +N P S F+FLLSTRAGGLG+NL TAD VI
Sbjct: 523 EDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVI 582
Query: 778 IFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAG 837
++DSDWNPQ+D QA+DRAHRIGQKKEV+VF + +IEE ++ERA +K+ +DA VIQ G
Sbjct: 583 LYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQG 642
Query: 838 LFNTTSTAQDRREMLEEIMRRGSRAL---GNDVPSEREINRLAARSDE 882
T ++ L +++R G+ + + ++ +I+R+ A+ +E
Sbjct: 643 RLAEQKTVN--KDELLQMVRYGAEMVFSSKDSTITDEDIDRIIAKGEE 688
>AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 |
chr2:5544601-5555543 REVERSE LENGTH=1724
Length = 1724
Score = 426 bits (1094), Expect = e-119, Method: Compositional matrix adjust.
Identities = 245/550 (44%), Positives = 341/550 (62%), Gaps = 41/550 (7%)
Query: 363 KITEQPSILQGGELRQYQIEGLQWMISLFNNNLNGILADEMGLGKTIQTISLIAHLLEYK 422
K+ EQP L GG LR YQ+EGL ++++ + N+ N ILADEMGLGKT+Q++S++ L +
Sbjct: 612 KLDEQPEWLIGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQ 671
Query: 423 GVTGPHLIVAPKAVLPNWMSEFSTWVPSITTVLYDGRLEERKAMKE-ELSGEGK------ 475
+ GP L+V P + L NW EF W+P + ++Y G R+ ++ E E K
Sbjct: 672 QIPGPFLVVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVCQQYEFYNEKKVGRPIK 731
Query: 476 FNVLITHYDLIMRDKAFLKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGT 535
FN L+T Y+++++DKA L KI W YL+VDE HRLKN E+ L L + + +LL+TGT
Sbjct: 732 FNALLTTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLE-FSTKNKLLITGT 790
Query: 536 PIQNNLQELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIR 595
P+QN+++ELW+LL+FL P F + F + + ++S +E +L LH +R
Sbjct: 791 PLQNSVEELWALLHFLDPGKFKNKDEFVENYK-------NLSSFNESELA---NLHLELR 840
Query: 596 PFILRRKKDEVEKCLPEKSQVILKCDMSAWQKVYYQQVTDVGRVGLDNG-SGKSKSLQNL 654
P ILRR +VEK LP K + IL+ +MS QK YY+ + + L+ G G SL N+
Sbjct: 841 PHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNI 900
Query: 655 TMQLRKCCNHPYLF-------VGDY-DMYKRKEIVRASGKFELLDRLLPKLRRAGHRVLL 706
++L+KCCNHP+LF GD D K +I+ +SGK +LD+LL +LR HRVL+
Sbjct: 901 VVELKKCCNHPFLFESADHGYGGDINDNSKLDKIILSSGKLVILDKLLVRLRETKHRVLI 960
Query: 707 FSQMTRLMDVLEIYLRLHDFKYLRLDGSTKTEERGTLLKKFNAPDSPYFMFLLSTRAGGL 766
FSQM R++D+L YL L F++ RLDGSTK E R + FNAP S F FLLSTRAGGL
Sbjct: 961 FSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFNAPASDDFCFLLSTRAGGL 1020
Query: 767 GLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQK 826
G+NL TADTV+IFDSDWNPQ D QA RAHRIGQ++ V ++ V+ S+EE ILERAK+K
Sbjct: 1021 GINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILERAKRK 1080
Query: 827 MGIDAKVIQAGLFNTTSTAQDRREMLEEIMRRGSRALGNDVPSEREINRLAARSDEEFWL 886
M +D VIQ A+ R E E ++GS N++ + I R A EE +
Sbjct: 1081 MVLDHLVIQK------LNAEGRLEKRE--TKKGSNFDKNELSA---ILRFGA---EELFK 1126
Query: 887 FEKMDEERRQ 896
+K DEE ++
Sbjct: 1127 EDKNDEESKK 1136
>AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1
| chromatin remodeling 1 | chr5:26649050-26652869
FORWARD LENGTH=764
Length = 764
Score = 409 bits (1052), Expect = e-114, Method: Compositional matrix adjust.
Identities = 234/536 (43%), Positives = 336/536 (62%), Gaps = 29/536 (5%)
Query: 370 ILQGGELRQYQIEGLQWMISLFNNNLNGILADEMGLGKTIQTISLIAHLLEYKGVTGPHL 429
+L GG+L+ YQ++G++W+ISL+ N LNGILAD+MGLGKTIQTI ++HL + G+ GP+L
Sbjct: 196 LLTGGQLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHL-KGNGLDGPYL 254
Query: 430 IVAPKAVLPNWMSEFSTWVPSITTVLYDG----RLEERKAMKEELSGEGKFNVLITHYDL 485
++AP + L NW +E + + PSI ++Y G R E R+ + G KF ++IT Y++
Sbjct: 255 VIAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRDELRRKHMPKTVGP-KFPIVITSYEV 313
Query: 486 IMRD-KAFLKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQEL 544
M D K L+ W+Y+++DEGHRLKNH+ L R L + +LLLTGTP+QNNL EL
Sbjct: 314 AMNDAKRILRHYPWKYVVIDEGHRLKNHKCKLLRELKH-LKMDNKLLLTGTPLQNNLSEL 372
Query: 545 WSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQ--LLIIRRLHQVIRPFILRRK 602
WSLLNF+LP+IF S FE WF+ ++ + + +EE+ ++ +LH ++RPFILRR
Sbjct: 373 WSLLNFILPDIFTSHDEFESWFDFSEKNKNEATKEEEEKRRAQVVSKLHGILRPFILRRM 432
Query: 603 KDEVEKCLPEKSQVILKCDMSAWQKVYYQQVTD------VGRVGLDNGSGKSKSLQNLTM 656
K +VE LP K ++I+ M+ QK + + + + +G + G G L NL +
Sbjct: 433 KCDVELSLPRKKEIIMYATMTDHQKKFQEHLVNNTLEAHLGENAI-RGQGWKGKLNNLVI 491
Query: 657 QLRKCCNHPYLFVGDYD---MYKR-KEIVRASGKFELLDRLLPKLRRAGHRVLLFSQMTR 712
QLRK CNHP L G D +Y +EIV GKF LL+RLL +L H+VL+FSQ T+
Sbjct: 492 QLRKNCNHPDLLQGQIDGSYLYPPVEEIVGQCGKFRLLERLLVRLFANNHKVLIFSQWTK 551
Query: 713 LMDVLEIYLRLHDFKYLRLDGSTKTEERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQT 772
L+D+++ Y F+ R+DGS K +ER +K F+ S +FLLSTRAGGLG+NL
Sbjct: 552 LLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTRAGGLGINLTA 611
Query: 773 ADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAK 832
ADT I++DSDWNPQMD QA DR HRIGQ K V V+ L + SIE +L+RA K+ ++
Sbjct: 612 ADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIETRVLKRAYSKLKLEHV 671
Query: 833 VIQAGLF-------NTTSTAQDRREMLEEIMRRGSRALGNDVPSEREINRLAARSD 881
VI G F +T +D +L+E + + D+ S+ +++RL RSD
Sbjct: 672 VIGQGQFHQERAKSSTPLEEEDILALLKEDETAEDKLIQTDI-SDADLDRLLDRSD 726
>AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin
remodeling factor CHD3 (PICKLE) | chr2:10714411-10723763
FORWARD LENGTH=1384
Length = 1384
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/556 (39%), Positives = 323/556 (58%), Gaps = 64/556 (11%)
Query: 336 DSDHNGDSRDLLEGQRQYNSAIHSIQEKITEQPSILQGGELRQYQIEGLQWMISLFNNNL 395
D DH + RD ++ P L+G L YQ+EGL ++ ++
Sbjct: 249 DVDHKRNPRDF---------------QQFDHTPEFLKG-LLHPYQLEGLNFLRFSWSKQT 292
Query: 396 NGILADEMGLGKTIQTISLIAHLLEYKGVTGPHLIVAPKAVLPNWMSEFSTWVPSITTVL 455
+ ILADEMGLGKTIQ+I+L+A L E + PHL++AP + L NW EF+TW P + V+
Sbjct: 293 HVILADEMGLGKTIQSIALLASLFEENLI--PHLVIAPLSTLRNWEREFATWAPQMNVVM 350
Query: 456 YDGRLEERKAMKE------------------ELSGEGK-----FNVLITHYDLIMRDKAF 492
Y G + R ++E ++S E K F+VL+T Y++I D A
Sbjct: 351 YFGTAQARAVIREHEFYLSKDQKKIKKKKSGQISSESKQKRIKFDVLLTSYEMINLDSAV 410
Query: 493 LKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQELWSLLNFLL 552
LK I W +IVDEGHRLKN +S L +L + Y R+LLTGTP+QNNL EL+ L++FL
Sbjct: 411 LKPIKWECMIVDEGHRLKNKDSKLFSSL-TQYSSNHRILLTGTPLQNNLDELFMLMHFLD 469
Query: 553 PNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKDEVEKCLPE 612
F S++ F++ F + EEQ I RLH+++ P +LRR K +V K +P
Sbjct: 470 AGKFGSLEEFQEEFK---------DINQEEQ---ISRLHKMLAPHLLRRVKKDVMKDMPP 517
Query: 613 KSQVILKCDMSAWQKVYYQQVTDVGRVGLDNGSGKSKSLQNLTMQLRKCCNHPYLFVGDY 672
K ++IL+ D+S+ QK YY+ + L G SL N+ M+LRK C HPY+ G
Sbjct: 518 KKELILRVDLSSLQKEYYKAIFTRNYQVLTKKGGAQISLNNIMMELRKVCCHPYMLEGVE 577
Query: 673 DMYKR-----KEIVRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDVLEIYLRLHDFK 727
+ K+++ + GK +LLD+++ KL+ GHRVL+++Q ++D+LE Y ++
Sbjct: 578 PVIHDANEAFKQLLESCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCTHKKWQ 637
Query: 728 YLRLDGSTKTEERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQM 787
Y R+DG ER + +FNA +S F FLLSTRAGGLG+NL TADTVII+DSDWNP
Sbjct: 638 YERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHA 697
Query: 788 DQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQD 847
D QA RAHR+GQ +V ++ L++ G+IEE +++ K+KM ++ V+ G T + Q
Sbjct: 698 DLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQLTKKKMVLEHLVV--GKLKTQNINQ- 754
Query: 848 RREMLEEIMRRGSRAL 863
E L++I+R GS+ L
Sbjct: 755 --EELDDIIRYGSKEL 768
>AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552440-18556669
REVERSE LENGTH=851
Length = 851
Score = 359 bits (921), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 207/546 (37%), Positives = 324/546 (59%), Gaps = 21/546 (3%)
Query: 376 LRQYQIEGLQWMISLFNNNLNGIL-ADEMGLGKTIQTISLIAHLLEYKGVTGPHLIVAPK 434
L+ +Q+EG+ W+I + +N +L D+MGLGKT+Q IS +++L +G+ GP L++ P
Sbjct: 51 LKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLPGPFLVLCPL 110
Query: 435 AVLPNWMSEFSTWVPSITTVLYDGRLEERKAMKEELSGEG---KFNVLITHYDLIMRDKA 491
+V W+SE + + P++ + Y G R M++ + G F+VL+T YD+ + D+
Sbjct: 111 SVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYDHGHFLPFDVLLTTYDIALVDQD 170
Query: 492 FLKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQELWSLLNFL 551
FL +I W+Y I+DE RLKN S L L + I RRLL+TGTPIQNNL ELW+L++F
Sbjct: 171 FLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNNLTELWALMHFC 230
Query: 552 LPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKDEVEK--- 608
+P +F ++ F F D +DVS D+E + L ++ F+LRR K + +
Sbjct: 231 MPLVFGTLDQFLSAFKET-GDGLDVS-NDKETY---KSLKFILGAFMLRRTKSLLIESGN 285
Query: 609 -CLPEKSQVILKCDMSAWQKVYYQQVTD---VGRVGLDNGSGKSKSLQNLTMQLRKCCNH 664
LP +++ + + + QK Y + G + L +G SLQN+ +QLRK C+H
Sbjct: 286 LVLPPLTELTVMVPLVSLQKKIYTSILRKELPGLLELSSGGSNHTSLQNIVIQLRKACSH 345
Query: 665 PYLFVG-DYDMYKRKE-IVRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDVLEIYLR 722
PYLF G + + ++ E +V+ASGK +LD+LL +L +GHRVLLFSQMT +D+L+ ++
Sbjct: 346 PYLFPGIEPEPFEEGEHLVQASGKLLVLDQLLKRLHDSGHRVLLFSQMTSTLDILQDFME 405
Query: 723 LHDFKYLRLDGSTKTEERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSD 782
L + Y RLDGS + EER +K F+ S F+F++STRAGG+GLNL ADTVI ++ D
Sbjct: 406 LRRYSYERLDGSVRAEERFAAIKNFSVDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQD 465
Query: 783 WNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTT 842
WNPQ+D+QA RAHRIGQ V LV+ S+EEVIL RA++K+ + V+ +
Sbjct: 466 WNPQVDKQALQRAHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVVGDNMEEKE 525
Query: 843 STAQDRREMLEEIMRRGSRALGNDVPSEREINRLAARSDEEFWLFEKMD---EERRQEEN 899
D R ++ + R + N+ ++ +++ +++ + + ++ EERR E N
Sbjct: 526 EDGGDLRSLVFGLQRFDPEEIHNEESDNLKMVEISSLAEKVVAIRQNVEPDKEERRFEIN 585
Query: 900 YRSRLM 905
L+
Sbjct: 586 SSDTLL 591
>AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 |
chr5:18083659-18092162 REVERSE LENGTH=2223
Length = 2223
Score = 358 bits (918), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 214/528 (40%), Positives = 313/528 (59%), Gaps = 44/528 (8%)
Query: 364 ITEQPSILQGGELRQYQIEGLQWMISLFNNNLNGILADEMGLGKTIQTISLIAHLLEYKG 423
+TEQP L+GG L +Q+E L W+ ++ + N ILADEMGLGKT+ + ++ L G
Sbjct: 677 LTEQPQELRGGALFAHQLEALNWLRRCWHKSKNVILADEMGLGKTVSASAFLSSLYFEFG 736
Query: 424 VTGPHLIVAPKAVLPNWMSEFSTWVPSITTVLYDGRLEERKAMKE------------ELS 471
V P L++ P + +PNW+SEFS W P + V Y G + R +++ +
Sbjct: 737 VARPCLVLVPLSTMPNWLSEFSLWAPLLNVVEYHGSAKGRAIIRDYEWHAKNSTGTTKKP 796
Query: 472 GEGKFNVLITHYDLIMRDKAFLKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLL 531
KFNVL+T Y++++ D + L+ + W L+VDEGHRLKN ES L L++ + Q R+L
Sbjct: 797 TSYKFNVLLTTYEMVLADSSHLRGVPWEVLVVDEGHRLKNSESKLFSLLNT-FSFQHRVL 855
Query: 532 LTGTPIQNNLQELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLH 591
LTGTP+QNN+ E+++LLNFL P+ F S+ +FE+ F+ LT E+ + L
Sbjct: 856 LTGTPLQNNIGEMYNLLNFLQPSSFPSLSSFEERFH---------DLTSAEK---VEELK 903
Query: 592 QVIRPFILRRKKDEVEKCLPEKSQVILKCDMSAWQKVYYQQVTDVGRVGLDN-GSGKSK- 649
+++ P +LRR K + + +P K++ ++ ++++ Q YY+ + L N G G ++
Sbjct: 904 KLVAPHMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYYRAMLTKNYQILRNIGKGVAQQ 963
Query: 650 SLQNLTMQLRKCCNHPYLFVGDYDMYKRKEI-----VRASGKFELLDRLLPKLRRAGHRV 704
S+ N+ MQLRK CNHPYL G E ++AS K LL +L L + GHRV
Sbjct: 964 SMLNIVMQLRKVCNHPYLIPGTEPESGSLEFLHDMRIKASAKLTLLHSMLKVLHKEGHRV 1023
Query: 705 LLFSQMTRLMDVLEIYLRLH--DFKYLRLDGSTKTEERGTLLKKFNAPDSPYFMFLLSTR 762
L+FSQMT+L+D+LE YL + + R+DGS +R + +FN D F+FLLSTR
Sbjct: 1024 LIFSQMTKLLDILEDYLNIEFGPKTFERVDGSVAVADRQAAIARFNQ-DKNRFVFLLSTR 1082
Query: 763 AGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILER 822
A GLG+NL TADTVII+DSD+NP D QA +RAHRIGQ K + V+ LV S+EE IL+
Sbjct: 1083 ACGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQL 1142
Query: 823 AKQKMGIDAKVIQAGLFNTTSTAQDRREMLEEIMRRGSRALGNDVPSE 870
AK+K+ +D LF S +Q E+I+R G+ L ND E
Sbjct: 1143 AKKKLMLDQ------LFVNKSGSQKE---FEDILRWGTEELFNDSAGE 1181
>AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1202
Length = 1202
Score = 353 bits (907), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 209/511 (40%), Positives = 303/511 (59%), Gaps = 49/511 (9%)
Query: 368 PSILQGGELRQYQIEGLQWMISLFNNNLNGILADEMGLGKTIQTISLIAHLLEYKGVTGP 427
P L G L YQ+EGL ++ ++ N ILADEMGLGKTIQ+I+ +A L E P
Sbjct: 218 PEFLTGT-LHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSIAFLASLFEEN--LSP 274
Query: 428 HLIVAPKAVLPNWMSEFSTWVPSITTVLYDGRLEERKAMKEE--LSGEG---KFNVLITH 482
HL+VAP + + NW EF+TW P + V+Y G E R + E EG KF+VL+T
Sbjct: 275 HLVVAPLSTIRNWEREFATWAPHMNVVMYTGDSEARDVIWEHEFYFSEGRKSKFDVLLTT 334
Query: 483 YDLIMRDKAFLKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQ 542
Y+++ + L I W +I+DEGHRLKN +S L +L S + + +LLTGTP+QNNL
Sbjct: 335 YEMVHPGISVLSPIKWTCMIIDEGHRLKNQKSKLYSSL-SQFTSKHIVLLTGTPLQNNLN 393
Query: 543 ELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRR- 601
EL++L++FL + F S++ F+D + EEQ I RLHQ++ P +LRR
Sbjct: 394 ELFALMHFLDADKFGSLEKFQD-------------INKEEQ---ISRLHQMLAPHLLRRL 437
Query: 602 KKDEVEKCLPEKSQVILKCDMSAWQK-VYYQQVTDVGRVGLDNGSGKSKSLQNLTMQLRK 660
KKD ++ +P K ++IL+ DMS+ QK VY +T+ +V K + N+ M+LR+
Sbjct: 438 KKDVLKDKVPPKKELILRVDMSSQQKEVYKAVITNNYQVLTKKRDAK---ISNVLMKLRQ 494
Query: 661 CCNHPYLFVGDYDMYKRKE--------IVRASGKFELLDRLLPKLRRAGHRVLLFSQMTR 712
C+HPYL D R E ++ ASGK +LLD+++ KL+ GHRVL+++Q
Sbjct: 495 VCSHPYLLP---DFEPRFEDANEAFTKLLEASGKLQLLDKMMVKLKEQGHRVLIYTQFQH 551
Query: 713 LMDVLEIYLRLHDFKYLRLDGSTKTEERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQT 772
+ +LE Y ++ Y R+DG ER + +FNA +S F FLLSTRAGG+G+NL T
Sbjct: 552 TLYLLEDYFTFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIGINLAT 611
Query: 773 ADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAK 832
ADTVII+DSDWNP D QA R HR+GQ +V ++ L+ G++EE ++E K KM ++
Sbjct: 612 ADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITKNKMLLEHL 671
Query: 833 VIQAGLFNTTSTAQDRREMLEEIMRRGSRAL 863
V+ QD L++I++ GS+ L
Sbjct: 672 VV-----GKQHLCQDE---LDDIIKYGSKEL 694
>AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1161
Length = 1161
Score = 353 bits (906), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 209/511 (40%), Positives = 303/511 (59%), Gaps = 49/511 (9%)
Query: 368 PSILQGGELRQYQIEGLQWMISLFNNNLNGILADEMGLGKTIQTISLIAHLLEYKGVTGP 427
P L G L YQ+EGL ++ ++ N ILADEMGLGKTIQ+I+ +A L E P
Sbjct: 177 PEFLTGT-LHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSIAFLASLFEEN--LSP 233
Query: 428 HLIVAPKAVLPNWMSEFSTWVPSITTVLYDGRLEERKAMKEE--LSGEG---KFNVLITH 482
HL+VAP + + NW EF+TW P + V+Y G E R + E EG KF+VL+T
Sbjct: 234 HLVVAPLSTIRNWEREFATWAPHMNVVMYTGDSEARDVIWEHEFYFSEGRKSKFDVLLTT 293
Query: 483 YDLIMRDKAFLKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQ 542
Y+++ + L I W +I+DEGHRLKN +S L +L S + + +LLTGTP+QNNL
Sbjct: 294 YEMVHPGISVLSPIKWTCMIIDEGHRLKNQKSKLYSSL-SQFTSKHIVLLTGTPLQNNLN 352
Query: 543 ELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRR- 601
EL++L++FL + F S++ F+D + EEQ I RLHQ++ P +LRR
Sbjct: 353 ELFALMHFLDADKFGSLEKFQD-------------INKEEQ---ISRLHQMLAPHLLRRL 396
Query: 602 KKDEVEKCLPEKSQVILKCDMSAWQK-VYYQQVTDVGRVGLDNGSGKSKSLQNLTMQLRK 660
KKD ++ +P K ++IL+ DMS+ QK VY +T+ +V K + N+ M+LR+
Sbjct: 397 KKDVLKDKVPPKKELILRVDMSSQQKEVYKAVITNNYQVLTKKRDAK---ISNVLMKLRQ 453
Query: 661 CCNHPYLFVGDYDMYKRKE--------IVRASGKFELLDRLLPKLRRAGHRVLLFSQMTR 712
C+HPYL D R E ++ ASGK +LLD+++ KL+ GHRVL+++Q
Sbjct: 454 VCSHPYLLP---DFEPRFEDANEAFTKLLEASGKLQLLDKMMVKLKEQGHRVLIYTQFQH 510
Query: 713 LMDVLEIYLRLHDFKYLRLDGSTKTEERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQT 772
+ +LE Y ++ Y R+DG ER + +FNA +S F FLLSTRAGG+G+NL T
Sbjct: 511 TLYLLEDYFTFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIGINLAT 570
Query: 773 ADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAK 832
ADTVII+DSDWNP D QA R HR+GQ +V ++ L+ G++EE ++E K KM ++
Sbjct: 571 ADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITKNKMLLEHL 630
Query: 833 VIQAGLFNTTSTAQDRREMLEEIMRRGSRAL 863
V+ QD L++I++ GS+ L
Sbjct: 631 VV-----GKQHLCQDE---LDDIIKYGSKEL 653
>AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552343-18556669
REVERSE LENGTH=877
Length = 877
Score = 352 bits (902), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 205/562 (36%), Positives = 328/562 (58%), Gaps = 34/562 (6%)
Query: 376 LRQYQIEGLQWMISLFNNNLNGIL-ADEMGLGKTIQTISLIAHLLEYKGVTGPHLIVAPK 434
L+ +Q+EG+ W+I + +N +L D+MGLGKT+Q IS +++L +G+ GP L++ P
Sbjct: 51 LKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLPGPFLVLCPL 110
Query: 435 AVLPNWMSEFSTWVPSITTVLYDG----RLEERKAMKEELSGEGK-----FNVLITHYDL 485
+V W+SE + + P++ + Y G RL+ RK+M + + K F+VL+T YD+
Sbjct: 111 SVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYDHVKKSSKGHFLPFDVLLTTYDI 170
Query: 486 IMRDKAFLKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQELW 545
+ D+ FL +I W+Y I+DE RLKN S L L + I RRLL+TGTPIQNNL ELW
Sbjct: 171 ALVDQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNNLTELW 230
Query: 546 SLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKDE 605
+L++F +P +F ++ F F + ++++++ + L ++ F+LRR K
Sbjct: 231 ALMHFCMPLVFGTLDQFLSAFKETGDGLSGLDVSNDKE--TYKSLKFILGAFMLRRTKSL 288
Query: 606 VEK----CLPEKSQVILKCDMSAWQKVYYQQVTD---VGRVGLDNGSGKSKSLQNLTMQL 658
+ + LP +++ + + + QK Y + G + L +G SLQN+ +QL
Sbjct: 289 LIESGNLVLPPLTELTVMVPLVSLQKKIYTSILRKELPGLLELSSGGSNHTSLQNIVIQL 348
Query: 659 RKCCNHPYLFVG-DYDMYKRKE-IVRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDV 716
RK C+HPYLF G + + ++ E +V+ASGK +LD+LL +L +GHRVLLFSQMT +D+
Sbjct: 349 RKACSHPYLFPGIEPEPFEEGEHLVQASGKLLVLDQLLKRLHDSGHRVLLFSQMTSTLDI 408
Query: 717 LEIYLRLHDFKYLRLDGSTKTEERGTLLKKFNAPD----------SPYFMFLLSTRAGGL 766
L+ ++ L + Y RLDGS + EER +K F+A S F+F++STRAGG+
Sbjct: 409 LQDFMELRRYSYERLDGSVRAEERFAAIKNFSAKTERGLDSEVDGSNAFVFMISTRAGGV 468
Query: 767 GLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQK 826
GLNL ADTVI ++ DWNPQ+D+QA RAHRIGQ V LV+ S+EEVIL RA++K
Sbjct: 469 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHVLSINLVTEHSVEEVILRRAERK 528
Query: 827 MGIDAKVIQAGLFNTTSTAQDRREMLEEIMRRGSRALGNDVPSEREINRLAARSDEEFWL 886
+ + V+ + D R ++ + R + N+ ++ +++ +++ +
Sbjct: 529 LQLSHNVVGDNMEEKEEDGGDLRSLVFGLQRFDPEEIHNEESDNLKMVEISSLAEKVVAI 588
Query: 887 FEKMD---EERRQEENYRSRLM 905
+ ++ EERR E N L+
Sbjct: 589 RQNVEPDKEERRFEINSSDTLL 610
>AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:523481-526884 FORWARD LENGTH=763
Length = 763
Score = 299 bits (766), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 202/547 (36%), Positives = 282/547 (51%), Gaps = 103/547 (18%)
Query: 376 LRQYQIEGLQWMISLFNNNLNG-ILADEMGLGKTIQTISLIAHLLEYKGVTGPHLIVAPK 434
L+ YQ+ G+ +++ L+ + G ILADEMGLGKTIQ I+ + L GPHL+V P
Sbjct: 213 LKPYQLVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYLTLLSRLNNDPGPHLVVCPA 272
Query: 435 AVLPNWMSEFSTWVPSITTVLYDGRLEERKAMKEELSGEGK------FNVLITHYDLIMR 488
+VL NW E W PS T + Y G R A EL+ K FNVL+ Y L R
Sbjct: 273 SVLENWERELRKWCPSFTVLQYHG--AARAAYSRELNSLSKAGKPPPFNVLLVCYSLFER 330
Query: 489 -------DKAFLKKIHWRYLIVDEGHRLKNHESALARTLDS-GYHIQRRLLLTGTPIQNN 540
D+ LK+ W +++DE H LK+ S + L S + +RL+LTGTP+QN+
Sbjct: 331 HSEQQKDDRKVLKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQND 390
Query: 541 LQELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDV-SLTDEEQLLIIRRLHQVIRPFIL 599
L ELWSLL F+LP+IF + + VD+ L + E +I R+ ++ PFIL
Sbjct: 391 LHELWSLLEFMLPDIFTT-------------ENVDLKKLLNAEDTELITRMKSILGPFIL 437
Query: 600 RRKKDEVEKCLPEKSQVILKCDMSAWQKVYYQQVTDVGRVG----LDNGSGKS------- 648
RR K +V + L K Q + M Q+ Y++ + R L S KS
Sbjct: 438 RRLKSDVMQQLVPKIQRVEYVLMERKQEDAYKEAIEEYRAASQARLVKLSSKSLNSLAKA 497
Query: 649 ---KSLQNLTMQLRKCCNHPYLFVGDYDMYKRKEIVRASGK--------FEL-LDR---- 692
+ + N Q RK NHP L +Y ++++R + K FE LDR
Sbjct: 498 LPKRQISNYFTQFRKIANHPLLI---RRIYSDEDVIRIARKLHPIGAFGFECSLDRVIEE 554
Query: 693 -----------------------------------------LLPKLRRAGHRVLLFSQMT 711
LLP ++++GHRVL+FSQ T
Sbjct: 555 VKGFNDFRIHQLLFQYGVNDTKGTLSDKHVMLSAKCRTLAELLPSMKKSGHRVLIFSQWT 614
Query: 712 RLMDVLEIYLRLHDFKYLRLDGSTKTEERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQ 771
++D+LE L + Y RLDGST+ +R T++ FN D F LLSTRAGG GLNL
Sbjct: 615 SMLDILEWTLDVIGVTYRRLDGSTQVTDRQTIVDTFNN-DKSIFACLLSTRAGGQGLNLT 673
Query: 772 TADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDA 831
ADTVII D D+NPQ+D+QAEDR HRIGQ K V +F LV+ +++E I E AK+K+ +DA
Sbjct: 674 GADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIFRLVTKSTVDENIYEIAKRKLVLDA 733
Query: 832 KVIQAGL 838
V+++G+
Sbjct: 734 AVLESGV 740
>AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA
binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20103807 FORWARD
LENGTH=2045
Length = 2045
Score = 276 bits (705), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 181/524 (34%), Positives = 270/524 (51%), Gaps = 68/524 (12%)
Query: 375 ELRQYQIEGLQWMISLFNNNLNGILADEMGLGKTIQTISLIAH-LLEYKGVTG-----PH 428
+LR+YQ EG+ W+ L L+GIL D+MGLGKT+Q +++A E +G T P
Sbjct: 1450 QLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDELDVFPS 1509
Query: 429 LIVAPKAVLPNWMSEFSTWVP-SITTVL-YDGRLEERKAMKEELSGEGKFNVLITHYDLI 486
+IV P ++ +W E ++ S+ +VL Y G ++R +++E+ + NV+IT YD++
Sbjct: 1510 IIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLREQFNNH---NVIITSYDVV 1566
Query: 487 MRDKAFLKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQELWS 546
+D +L + W Y I+DEGH +KN +S + + Q RL+L+GTPIQNN+ ELWS
Sbjct: 1567 RKDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQ-LKAQHRLILSGTPIQNNIMELWS 1625
Query: 547 LLNFLLPNIFNSVQNFEDWFNAPFADRVD--VSLTDEEQ-LLIIRRLHQVIRPFILRRKK 603
L +FL+P + + F+ + P D S D E +L + LH+ + PF+LRR K
Sbjct: 1626 LFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPFLLRRTK 1685
Query: 604 DEVEKCLPEKSQVILKCDMSAWQKVYYQQVT------------------DVGRVGLDNGS 645
+EV LPEK CD+S Q Y+Q + D G +
Sbjct: 1686 EEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSADSGNADVAPTK 1745
Query: 646 GKSKSLQNLTMQLRKCCNHPYLFVGD-----------------YDMYKRKEIVRASGKFE 688
+ Q L L K C+HP L +GD D+ V+ S K
Sbjct: 1746 ASTHVFQALQY-LLKLCSHPLLVLGDKVTEPVASDLAAMINGCSDIITELHKVQHSPKLV 1804
Query: 689 LLDRLLPK-------------LRRAGHRVLLFSQMTRLMDVLEIYL---RLHDFKYLRLD 732
L +L + L HRVL+F+Q L+D++E L + Y+RLD
Sbjct: 1805 ALQEILEECGIGSDASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLD 1864
Query: 733 GSTKTEERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAE 792
GS E+R ++K FN+ D + LL+T GGLGLNL +ADT++ + DWNP D QA
Sbjct: 1865 GSVVPEKRFEIVKAFNS-DPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQAM 1923
Query: 793 DRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQA 836
DRAHR+GQK+ V V L+ G++EE ++ K K+ + VI A
Sbjct: 1924 DRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQKFKVSVANTVINA 1967
>AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20104153 FORWARD
LENGTH=2129
Length = 2129
Score = 276 bits (705), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 181/524 (34%), Positives = 270/524 (51%), Gaps = 68/524 (12%)
Query: 375 ELRQYQIEGLQWMISLFNNNLNGILADEMGLGKTIQTISLIAH-LLEYKGVTG-----PH 428
+LR+YQ EG+ W+ L L+GIL D+MGLGKT+Q +++A E +G T P
Sbjct: 1481 QLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDELDVFPS 1540
Query: 429 LIVAPKAVLPNWMSEFSTWVP-SITTVL-YDGRLEERKAMKEELSGEGKFNVLITHYDLI 486
+IV P ++ +W E ++ S+ +VL Y G ++R +++E+ + NV+IT YD++
Sbjct: 1541 IIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLREQFNNH---NVIITSYDVV 1597
Query: 487 MRDKAFLKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQELWS 546
+D +L + W Y I+DEGH +KN +S + + Q RL+L+GTPIQNN+ ELWS
Sbjct: 1598 RKDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQ-LKAQHRLILSGTPIQNNIMELWS 1656
Query: 547 LLNFLLPNIFNSVQNFEDWFNAPFADRVD--VSLTDEEQ-LLIIRRLHQVIRPFILRRKK 603
L +FL+P + + F+ + P D S D E +L + LH+ + PF+LRR K
Sbjct: 1657 LFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPFLLRRTK 1716
Query: 604 DEVEKCLPEKSQVILKCDMSAWQKVYYQQVT------------------DVGRVGLDNGS 645
+EV LPEK CD+S Q Y+Q + D G +
Sbjct: 1717 EEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSADSGNADVAPTK 1776
Query: 646 GKSKSLQNLTMQLRKCCNHPYLFVGD-----------------YDMYKRKEIVRASGKFE 688
+ Q L L K C+HP L +GD D+ V+ S K
Sbjct: 1777 ASTHVFQALQY-LLKLCSHPLLVLGDKVTEPVASDLAAMINGCSDIITELHKVQHSPKLV 1835
Query: 689 LLDRLLPK-------------LRRAGHRVLLFSQMTRLMDVLEIYL---RLHDFKYLRLD 732
L +L + L HRVL+F+Q L+D++E L + Y+RLD
Sbjct: 1836 ALQEILEECGIGSDASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLD 1895
Query: 733 GSTKTEERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAE 792
GS E+R ++K FN+ D + LL+T GGLGLNL +ADT++ + DWNP D QA
Sbjct: 1896 GSVVPEKRFEIVKAFNS-DPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQAM 1954
Query: 793 DRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQA 836
DRAHR+GQK+ V V L+ G++EE ++ K K+ + VI A
Sbjct: 1955 DRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQKFKVSVANTVINA 1998
>AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr3:4065636-4073992 FORWARD LENGTH=2055
Length = 2055
Score = 272 bits (696), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 144/343 (41%), Positives = 208/343 (60%), Gaps = 10/343 (2%)
Query: 334 EIDSDHNGDSRDLLEGQR------QYNSAIHSIQEKITEQPSILQGGELRQYQIEGLQWM 387
E+ D++ DS D + Q +S + T+ P +L+ LR+YQ GL W+
Sbjct: 489 EVAEDNDKDSSDKIADAAAAARSAQPTGFTYSTTKVRTKLPFLLKHS-LREYQHIGLDWL 547
Query: 388 ISLFNNNLNGILADEMGLGKTIQTISLIAHLLEYKGVTGPHLIVAPKAVLPNWMSEFSTW 447
++++ LNGILADEMGLGKTI TI+L+AHL KG+ GPHLIV P +V+ NW +EF W
Sbjct: 548 VTMYEKKLNGILADEMGLGKTIMTIALLAHLACDKGIWGPHLIVVPTSVMLNWETEFLKW 607
Query: 448 VPSITTVLYDGRLEERKAMKEELSGEGKFNVLITHYDLIMRDKAFLKKIHWRYLIVDEGH 507
P+ + Y G +ERK ++ F+V IT Y L+++D K+ W+YLI+DE H
Sbjct: 608 CPAFKILTYFGSAKERKLKRQGWMKLNSFHVCITTYRLVIQDSKMFKRKKWKYLILDEAH 667
Query: 508 RLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQELWSLLNFLLPNIFNSVQNFEDWFN 567
+KN +S +TL ++ +RR+LLTGTP+QN+L ELWSL++FL+P++F S Q F+DWF
Sbjct: 668 LIKNWKSQRWQTL-LNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFC 726
Query: 568 APFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKDEVEKCLPEKSQVILKCDMSAWQK 627
P A V+ ++ +I RLH V+RPF+LRR K +VEK LP K + ++ C +S Q+
Sbjct: 727 NPIAGMVEGQEKINKE--VIDRLHNVLRPFLLRRLKRDVEKQLPSKHEHVIFCRLSKRQR 784
Query: 628 VYYQQVTDVGRVGLDNGSGKSKSLQNLTMQLRKCCNHPYLFVG 670
Y+ SG + ++ MQLRK CNHP LF G
Sbjct: 785 NLYEDFIASTETQATLTSGSFFGMISIIMQLRKVCNHPDLFEG 827
Score = 187 bits (474), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 122/165 (73%), Gaps = 1/165 (0%)
Query: 677 RKEIVRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDVLEIYLRLHDFKYLRLDGSTK 736
R+ I GK + L LL KL+ GHR L+F+QMT+++DVLE ++ L+ + Y+RLDGST
Sbjct: 1067 RRLIQFDCGKLQELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTP 1126
Query: 737 TEERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAH 796
EER TL+++FN + F+F+LSTR+GG+G+NL ADTVI +DSDWNP MDQQA+DR H
Sbjct: 1127 PEERQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCH 1185
Query: 797 RIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNT 841
RIGQ +EV ++ L+S +IEE IL++A QK +D VIQ G +NT
Sbjct: 1186 RIGQTREVHIYRLISESTIEENILKKANQKRVLDNLVIQNGEYNT 1230
>AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 |
chr2:8129154-8133502 FORWARD LENGTH=1187
Length = 1187
Score = 258 bits (658), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 255/511 (49%), Gaps = 68/511 (13%)
Query: 375 ELRQYQIEGLQWMISLFNNNLNGILADEMGLGKTIQTISLIAHLLEYKGVTGPHLIVAPK 434
+L YQ G+QW+ L GI+ DEMGLGKTIQ +S + L + + P +I+ P
Sbjct: 384 KLFDYQRVGVQWLWELHCQRAGGIIGDEMGLGKTIQVLSFLGSL-HFSKMYKPSIIICPV 442
Query: 435 AVLPNWMSEFSTWVPSI-TTVLYDGRLEERKAMKEELSGEGKF----------------- 476
+L W E W P +L+D + G+GK
Sbjct: 443 TLLRQWRREAQKWYPDFHVEILHDSAQDSGHG-----KGQGKASESDYDSESSVDSDHEP 497
Query: 477 --------------------NVLITHYDLIMRDKAFLKKIHWRYLIVDEGHRLKNHESAL 516
+LIT Y+ + L I W Y ++DEGHR++N S +
Sbjct: 498 KSKNTKKWDSLLNRVLNSESGLLITTYEQLRLQGEKLLNIEWGYAVLDEGHRIRNPNSDI 557
Query: 517 ARTLDSGYHIQRRLLLTGTPIQNNLQELWSLLNFLLPNIFNSVQNFEDWFNAP-----FA 571
+ R +++TG PIQN L ELWSL +F+ P + FE F+ P +A
Sbjct: 558 TLVCKQLQTVHR-IIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFSVPITVGGYA 616
Query: 572 DRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKDEVEKCLPEKSQVILKCDMSAWQKVYYQ 631
+ + ++ + ++ L +I P++LRR K +V L +K++ +L C ++ Q+ Y+
Sbjct: 617 NASPLQVSTAYRCAVV--LRDLIMPYLLRRMKADVNAHLTKKTEHVLFCSLTVEQRSTYR 674
Query: 632 QVTDVGRVGLDNGSGKSKSLQNLTMQLRKCCNHPYLFV-------GDYDMYKRKEIVRAS 684
V G SL + + +RK CNHP L DY +R S
Sbjct: 675 AFLASSEVE-QIFDGNRNSLYGIDV-MRKICNHPDLLEREHSHQNPDYGNPER------S 726
Query: 685 GKFELLDRLLPKLRRAGHRVLLFSQMTRLMDVLEIYLRLHDFKYLRLDGSTKTEERGTLL 744
GK +++ +L ++ GHRVLLFSQ +++D+LE +L +++ Y R+DG T ++R L+
Sbjct: 727 GKMKVVAEVLKVWKQQGHRVLLFSQTQQMLDILESFLVANEYSYRRMDGLTPVKQRMALI 786
Query: 745 KKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEV 804
+FN + F+F+L+T+ GGLG NL A+ VIIFD DWNP D QA +RA RIGQKK+V
Sbjct: 787 DEFNNSED-MFVFVLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARERAWRIGQKKDV 845
Query: 805 RVFVLVSVGSIEEVILERAKQKMGIDAKVIQ 835
V+ L++ G+IEE + R K + K+++
Sbjct: 846 TVYRLITRGTIEEKVYHRQIYKHFLTNKILK 876
>AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1507
Length = 1507
Score = 253 bits (647), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 126/317 (39%), Positives = 200/317 (63%), Gaps = 16/317 (5%)
Query: 365 TEQPSILQGGELRQYQIEGLQWMISLFNNNLNGILADEMGLGKTIQTISLIAHLLEYKGV 424
T Q L G L++YQ++GLQW+++ + LNGILADEMGLGKTIQ ++ +AHL E K +
Sbjct: 575 TVQTPELFKGTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNI 634
Query: 425 TGPHLIVAPKAVLPNWMSEFSTWVPSITTVLYDGRLEERKAMKEELSG------EGKFNV 478
GP L+VAP +VL NW E S + P + T+ Y G L+ER +++ ++ + F++
Sbjct: 635 WGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINPKRMYRRDAGFHI 694
Query: 479 LITHYDLIMRDKAFLKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQ 538
LIT Y L++ D+ + +++ W+Y+++DE +K+ S +TL S ++ + RLLLTGTPIQ
Sbjct: 695 LITSYQLLVTDEKYFRRVKWQYMVLDEAQAIKSSSSIRWKTLLS-FNCRNRLLLTGTPIQ 753
Query: 539 NNLQELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFI 598
NN+ ELW+LL+F++P +F++ F +WF+ + + T E L RLH +++PF+
Sbjct: 754 NNMAELWALLHFIMPMLFDNHDQFNEWFSKGIENHAEHGGTLNEHQL--NRLHAILKPFM 811
Query: 599 LRRKKDEVEKCLPEKSQVILKCDMSAWQKVYYQQVTDVGRVG--LDNGSG-----KSKSL 651
LRR K +V L K++V + C +S+ Q+ +YQ + + + D+ G K +L
Sbjct: 812 LRRVKKDVVSELTTKTEVTVHCKLSSRQQAFYQAIKNKISLAELFDSNRGQFTDKKVLNL 871
Query: 652 QNLTMQLRKCCNHPYLF 668
N+ +QLRK CNHP LF
Sbjct: 872 MNIVIQLRKVCNHPELF 888
Score = 163 bits (412), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 108/154 (70%), Gaps = 1/154 (0%)
Query: 684 SGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDVLEIYLRLHDFKYLRLDGSTKTEERGTL 743
SGK + LD LL +LR HRVLLF+QMT+++++LE Y+ +KYLRLDGS+ +R +
Sbjct: 1205 SGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDM 1264
Query: 744 LKKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKE 803
++ F S F+FLLSTRAGGLG+NL ADTVI ++SDWNP +D QA DRAHR+GQ K+
Sbjct: 1265 VRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1323
Query: 804 VRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAG 837
V V+ L+ ++EE IL RA QK + V+ G
Sbjct: 1324 VTVYRLICKETVEEKILHRASQKNTVQQLVMTGG 1357
>AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=908
Length = 908
Score = 249 bits (636), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 173/510 (33%), Positives = 251/510 (49%), Gaps = 57/510 (11%)
Query: 376 LRQYQIEGLQWMISLFNN-----NLNG-ILADEMGLGKTIQTISLIAHLLEYKGVTGP-- 427
LR +Q EG+Q+M + N+NG ILAD+MGLGKT+Q+I+L+ LL +G G
Sbjct: 180 LRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQSITLLYTLL-CQGFDGTPM 238
Query: 428 ---HLIVAPKAVLPNWMSEFSTWVP---SITTVLYDGRLEERKAMKEELSGEGKFNVLIT 481
+IV P +++ NW +E WV + + R + + VLI
Sbjct: 239 VKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSFTRPRSALQVLII 298
Query: 482 HYDLI-MRDKAFLKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNN 540
Y+ M F + LI DE HRLKN ++ R L S +RR+LL+GTP+QN+
Sbjct: 299 SYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRALAS-LTCKRRVLLSGTPMQND 357
Query: 541 LQELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRR---LHQVIRPF 597
L+E ++++NF P +F ++ AP + + T+EE+ L R L + F
Sbjct: 358 LEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATEEEKNLAADRSAELSSKVNQF 417
Query: 598 ILRRKKDEVEKCLPEKSQVILKCDMSAWQKVYYQQVTDVGRVGLDNGSGKSKSLQNLTMQ 657
ILRR + LP K ++ C M+ Q Y + + L + + ++K L +T
Sbjct: 418 ILRRTNALLSNHLPPKIIEVVCCKMTTLQTTYNGCLCMQLKRALADNAKQTKVLAYITA- 476
Query: 658 LRKCCNHPYLFVGDYDMYKRKEI-------------------------------VRASGK 686
L+K CNHP L YD K V SGK
Sbjct: 477 LKKLCNHPKLI---YDTIKSGNPGTVGFENCLEFFPAEMFSGRSGAWTGGDGAWVELSGK 533
Query: 687 FELLDRLLPKLRR-AGHRVLLFSQMTRLMDVLEIYLRLHDFKYLRLDGSTKTEERGTLLK 745
+L RLL LRR R++L S T+ +D+ R + +LRLDGST +R L+
Sbjct: 534 MHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQKLVN 593
Query: 746 KFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVR 805
+ N P F FLLS++AGG GLNL A+ +++FD DWNP D+QA R R GQKK V
Sbjct: 594 RLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVY 653
Query: 806 VFVLVSVGSIEEVILERAKQKMGIDAKVIQ 835
V+ +S G+IEE + +R K G+ KVIQ
Sbjct: 654 VYRFLSTGTIEEKVYQRQMSKEGLQ-KVIQ 682
>AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=910
Length = 910
Score = 248 bits (634), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 173/512 (33%), Positives = 250/512 (48%), Gaps = 59/512 (11%)
Query: 376 LRQYQIEGLQWMISLFNN-----NLNG-ILADEMGLGKTIQTISLIAHLLEYKGVTGP-- 427
LR +Q EG+Q+M + N+NG ILAD+MGLGKT+Q+I+L+ LL +G G
Sbjct: 180 LRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQSITLLYTLL-CQGFDGTPM 238
Query: 428 ---HLIVAPKAVLPNWMSEFSTWVP---SITTVLYDGRLEERKAMKEELSGEGKFNVLIT 481
+IV P +++ NW +E WV + + R + + VLI
Sbjct: 239 VKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSFTRPRSALQVLII 298
Query: 482 HYDLI-MRDKAFLKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNN 540
Y+ M F + LI DE HRLKN ++ R L S +RR+LL+GTP+QN+
Sbjct: 299 SYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRALAS-LTCKRRVLLSGTPMQND 357
Query: 541 LQELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRR---LHQVIRPF 597
L+E ++++NF P +F ++ AP + + T+EE+ L R L + F
Sbjct: 358 LEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATEEEKNLAADRSAELSSKVNQF 417
Query: 598 ILRRKKDEVEKCLPEKSQVILKCDMSAWQKVYYQQVTDVGRV--GLDNGSGKSKSLQNLT 655
ILRR + LP K ++ C M+ Q Y + L + + ++K L +T
Sbjct: 418 ILRRTNALLSNHLPPKIIEVVCCKMTTLQSTLYNHFISSKNLKRALADNAKQTKVLAYIT 477
Query: 656 MQLRKCCNHPYLFVGDYDMYKRKEI-------------------------------VRAS 684
L+K CNHP L YD K V S
Sbjct: 478 A-LKKLCNHPKLI---YDTIKSGNPGTVGFENCLEFFPAEMFSGRSGAWTGGDGAWVELS 533
Query: 685 GKFELLDRLLPKLRR-AGHRVLLFSQMTRLMDVLEIYLRLHDFKYLRLDGSTKTEERGTL 743
GK +L RLL LRR R++L S T+ +D+ R + +LRLDGST +R L
Sbjct: 534 GKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQKL 593
Query: 744 LKKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKE 803
+ + N P F FLLS++AGG GLNL A+ +++FD DWNP D+QA R R GQKK
Sbjct: 594 VNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKR 653
Query: 804 VRVFVLVSVGSIEEVILERAKQKMGIDAKVIQ 835
V V+ +S G+IEE + +R K G+ KVIQ
Sbjct: 654 VYVYRFLSTGTIEEKVYQRQMSKEGLQ-KVIQ 684
>AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 |
chr5:25592160-25598405 REVERSE LENGTH=1090
Length = 1090
Score = 241 bits (615), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 177/550 (32%), Positives = 272/550 (49%), Gaps = 101/550 (18%)
Query: 376 LRQYQIEGLQWMISLFNNNLNGILADEMGLGKTIQTISLIAHLLEYKGVTGPHLIVAPKA 435
L +Q EGL W+ SL GIL D+MGLGKT+Q S +A L K + L+VAPK
Sbjct: 377 LYPHQREGLNWLWSLHTQGKGGILGDDMGLGKTMQICSFLAGLFHSKLIKRA-LVVAPKT 435
Query: 436 VLPNWMSEFSTWVPSITTVLYDGRLEERKA--MKEELSGEGKFNVLITHYDLIMRD-KAF 492
+LP+WM E +T S T Y G + + + L G+G +L+T YD++ + KA
Sbjct: 436 LLPHWMKELATVGLSQMTREYYGTSTKAREYDLHHILQGKG---ILLTTYDIVRNNTKAL 492
Query: 493 LKKIH-----------WRYLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNL 541
H W Y+I+DEGH +KN + A++L R++++GTPIQNNL
Sbjct: 493 QGDDHYTDEDDEDGNKWDYMILDEGHLIKNPNTQRAKSLLE-IPSSHRIIISGTPIQNNL 551
Query: 542 QELWSLLNFLLPNIFNSVQNFEDWFNAPFADRV----DVSLTDEEQLL---IIRRLHQVI 594
+ELW+L NF P + ++WF + + D + TD EQ + + + L + I
Sbjct: 552 KELWALFNFSCPGLLGD----KNWFKQNYEHYILRGTDKNATDREQRIGSTVAKNLREHI 607
Query: 595 RPFILRRKKDEV------EKCLPEKSQVILKCDMSAWQKVYYQQVTDVGRVGLDNGSGKS 648
+PF LRR K EV L +K ++++ ++A Q+ Y+ + + L G
Sbjct: 608 QPFFLRRLKSEVFGDDGATSKLSKKDEIVVWLRLTACQRQLYEAFLN-SEIVLSAFDG-- 664
Query: 649 KSLQNLTMQLRKCCNHPYLFVG---------------------------------DYDMY 675
L LT+ L+K C+HP L D D +
Sbjct: 665 SPLAALTI-LKKICDHPLLLTKRAAEDVLEGMDSTLTQEEAGVAERLAMHIADNVDTDDF 723
Query: 676 KRKEIVRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDVLEIYLRLHDFKYLRLDGST 735
+ K S K + LL L GHRVL+FSQ +++++++ L + + +LR+DG+T
Sbjct: 724 QTKN-DSISCKLSFIMSLLENLIPEGHRVLIFSQTRKMLNLIQDSLTSNGYSFLRIDGTT 782
Query: 736 KTEERGTLLKKFN----APDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQA 791
K +R +++F AP +FLL+++ GGLGL L AD VI+ D WNP D Q+
Sbjct: 783 KAPDRLKTVEEFQEGHVAP-----IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQS 837
Query: 792 EDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTS-------- 843
DRA+RIGQ K+V V+ L++ ++EE I + +V + GLF T +
Sbjct: 838 VDRAYRIGQTKDVIVYRLMTSATVEEKIYRK---------QVYKGGLFKTATEHKEQIRY 888
Query: 844 -TAQDRREML 852
+ QD RE+
Sbjct: 889 FSQQDLRELF 898
>AT3G57300.2 | Symbols: INO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1540
Length = 1540
Score = 240 bits (613), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 126/350 (36%), Positives = 200/350 (57%), Gaps = 49/350 (14%)
Query: 365 TEQPSILQGGELRQYQIEGLQWMISLFNNNLNGILADEMGLGKTIQTISLIAHLLEYKGV 424
T Q L G L++YQ++GLQW+++ + LNGILADEMGLGKTIQ ++ +AHL E K +
Sbjct: 575 TVQTPELFKGTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNI 634
Query: 425 TGPHLIVAPKAVLPNWMSEFSTWVPSITTVLYDGRLEERKAMKEELSG------------ 472
GP L+VAP +VL NW E S + P + T+ Y G L+ER +++ ++
Sbjct: 635 WGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINPKRVMFFSTWIIS 694
Query: 473 ---------------------------EGKFNVLITHYDLIMRDKAFLKKIHWRYLIVDE 505
+ F++LIT Y L++ D+ + +++ W+Y+++DE
Sbjct: 695 FDPWAVRQICICKRACNVVRFQTLSDMDAGFHILITSYQLLVTDEKYFRRVKWQYMVLDE 754
Query: 506 GHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQELWSLLNFLLPNIFNSVQNFEDW 565
+K+ S +TL S ++ + RLLLTGTPIQNN+ ELW+LL+F++P +F++ F +W
Sbjct: 755 AQAIKSSSSIRWKTLLS-FNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFDNHDQFNEW 813
Query: 566 FNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKDEVEKCLPEKSQVILKCDMSAW 625
F+ + + T E L RLH +++PF+LRR K +V L K++V + C +S+
Sbjct: 814 FSKGIENHAEHGGTLNEHQL--NRLHAILKPFMLRRVKKDVVSELTTKTEVTVHCKLSSR 871
Query: 626 QKVYYQQVTDVGRVG--LDNGSG-----KSKSLQNLTMQLRKCCNHPYLF 668
Q+ +YQ + + + D+ G K +L N+ +QLRK CNHP LF
Sbjct: 872 QQAFYQAIKNKISLAELFDSNRGQFTDKKVLNLMNIVIQLRKVCNHPELF 921
Score = 163 bits (412), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 108/154 (70%), Gaps = 1/154 (0%)
Query: 684 SGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDVLEIYLRLHDFKYLRLDGSTKTEERGTL 743
SGK + LD LL +LR HRVLLF+QMT+++++LE Y+ +KYLRLDGS+ +R +
Sbjct: 1238 SGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDM 1297
Query: 744 LKKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKE 803
++ F S F+FLLSTRAGGLG+NL ADTVI ++SDWNP +D QA DRAHR+GQ K+
Sbjct: 1298 VRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1356
Query: 804 VRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAG 837
V V+ L+ ++EE IL RA QK + V+ G
Sbjct: 1357 VTVYRLICKETVEEKILHRASQKNTVQQLVMTGG 1390
>AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORWARD
LENGTH=862
Length = 862
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 147/280 (52%), Gaps = 22/280 (7%)
Query: 376 LRQYQIEGLQWMISLFNNNLNGILADEMGLGKTIQTISLIAHLLEYKGVT---------- 425
L ++Q EG+++M +L+ NN GIL D+MGLGKTIQTI+ +A + G
Sbjct: 139 LLEHQREGVKFMYNLYKNNHGGILGDDMGLGKTIQTIAFLAAVYGKDGDAGESCLLESDK 198
Query: 426 GPHLIVAPKAVLPNWMSEFSTWVPSITTVLYDGRLEERKAMKEELSGEGKFNVLITHYDL 485
GP LI+ P +++ NW SEFS W +Y G R + E+L G VL+T +D
Sbjct: 199 GPVLIICPSSIIHNWESEFSRWASFFKVSVYHG--SNRDMILEKLKARG-VEVLVTSFDT 255
Query: 486 IMRDKAFLKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQELW 545
L I+W +I DE HRLKN +S L ++R+ LTGT +QN + EL+
Sbjct: 256 FRIQGPVLSGINWEIVIADEAHRLKNEKSKLYEACLE-IKTKKRIGLTGTVMQNKISELF 314
Query: 546 SLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLII-----RRLHQVIRPFILR 600
+L ++ P + ++F D+++ P ++ T E+ + I + L ++R ++LR
Sbjct: 315 NLFEWVAPGSLGTREHFRDFYDEPL--KLGQRATAPERFVQIADKRKQHLGSLLRKYMLR 372
Query: 601 RKKDE-VEKCLPEKSQVILKCDMSAWQKVYYQQVTDVGRV 639
R K+E + + K ++ C MS Q+ YQ++ + +
Sbjct: 373 RTKEETIGHLMMGKEDNVVFCQMSQLQRRVYQRMIQLPEI 412
Score = 133 bits (334), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 108/178 (60%), Gaps = 4/178 (2%)
Query: 681 VRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDVLEIYLRLHDFKYLRLDGSTKTEER 740
V+ GK L++L+ G ++LLFS R++D+LE +L + + RLDGST T R
Sbjct: 524 VKHCGKMRALEKLMASWISKGDKILLFSYSVRMLDILEKFLIRKGYSFARLDGSTPTNLR 583
Query: 741 GTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQ 800
+L+ FNA S +FL+ST+AGGLGLNL +A+ V+IFD +WNP D QA+DR+ R GQ
Sbjct: 584 QSLVDDFNASPSKQ-VFLISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDRSFRYGQ 642
Query: 801 KKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNT--TSTAQDRREMLEEIM 856
K+ V VF L+S GS+EE++ R K + + + AG T QD +E E+
Sbjct: 643 KRHVVVFRLLSAGSLEELVYTRQVYKQQL-SNIAVAGKMETRYFEGVQDCKEFQGELF 699
>AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling factor18
| chr1:17848620-17853731 REVERSE LENGTH=673
Length = 673
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 124/473 (26%), Positives = 214/473 (45%), Gaps = 54/473 (11%)
Query: 375 ELRQYQIEGLQWMISLFNNNLNGILADEMGLGKTIQTISLIAHLLEYKGVTGPHLIVAPK 434
+L +Q EG+++++ + +LADEMGLGKT+Q I++ + E + P LI+AP
Sbjct: 171 KLLPFQREGIEFIL---QHGGRVLLADEMGLGKTLQAIAVTTCVQE----SWPVLIIAPS 223
Query: 435 AVLPNWMSEFSTWV---PS-ITTVLYD-------GRLEERKAMKEELSGEGKFNVLITHY 483
++ +W + W+ PS I VL G K + +G FN I Y
Sbjct: 224 SLRLHWATMIHQWLHVPPSDIVVVLPQPGGSNKCGFTIVSSNTKGTIHLDGVFN--IVSY 281
Query: 484 DLIMRDKAFLKKIHWRYLIVDEGHRLKNHESA-LARTLDSGYHIQRRLLLTGTPIQNNLQ 542
D++ + L + ++ +I DE H LKN ++ + L Q +LL+GTP +
Sbjct: 282 DVVTKLDKLLMALDFKVVIADESHFLKNGQAKRTSACLPVIKKAQYAILLSGTPALSRPI 341
Query: 543 ELWSLLNFLLPNIFNSVQNFEDWF--NAPFADRVDVSLTDEEQLLIIRRLHQVIRPFIL- 599
EL+ L L P+++ ++ + + F S DE LH +++ ++
Sbjct: 342 ELFKQLEALYPDVYRNIHEYGGRYCKGGFFGTYQGASNHDE--------LHNLMKATVMI 393
Query: 600 RRKKDEVEKCLPEK--SQVILKC---DMSAWQKVYYQQVTDVGRVGLDNGSGKSKSLQNL 654
RR K +V LP K QV L DM ++++ ++ KSL+ +
Sbjct: 394 RRLKKDVLTELPSKRRQQVFLDLAAKDMKQINALFHELKVVKSKIKDCISEDDIKSLKFI 453
Query: 655 TMQLRKCCNHPYLFVGDYDMYKRKEIVRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLM 714
L +Y + + + L+ ++ AG + L+F+ ++
Sbjct: 454 EKNLIN------------KIYTDSAVAKIPAVLDYLENVI----EAGCKFLVFAHHQSML 497
Query: 715 DVLEIYLRLHDFKYLRLDGSTKTEERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQTAD 774
+ L +L+ +R+DGST R L+ F D +LS RA G+G+ L A
Sbjct: 498 EELHQFLKKKKVGCIRIDGSTPASSRQALVSDFQDKDE-IKAAVLSIRAAGVGITLTAAS 556
Query: 775 TVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKM 827
TVI + W P QAEDRAHRIGQ V + L++ +++++I + + K+
Sbjct: 557 TVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLANDTVDDIIWDVVQSKL 609
>AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domain |
chr5:17489327-17494830 FORWARD LENGTH=1277
Length = 1277
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 146/323 (45%), Gaps = 58/323 (17%)
Query: 397 GILADEMGLGKTIQTISLI----------------------------AHL-LEYKGVTGP 427
GILAD MGLGKT+ TI+LI H+ L G
Sbjct: 683 GILADAMGLGKTVMTIALILARPGRGNPENEDVLVADVNADKRNRKEIHMALTTVKAKGG 742
Query: 428 HLIVAPKAVLPNWMSEFSTWV-PSITTVL--YDG-RLEERKAMKEELSGEGKFNVLITHY 483
LI+ P A+L W E T P +VL Y G R + KA+ + VL + Y
Sbjct: 743 TLIICPMALLSQWKDELETHSKPDTVSVLVYYGGDRTHDAKAIASHDVVLTTYGVLTSAY 802
Query: 484 DLIMRDKAFLKKIHWRYLIVDEGHRLKNHESALAR-TLDSGYHIQRRLLLTGTPIQNNLQ 542
M + F +I W +++DE H +K+ ++ A+ T + H R LTGTP+QN L+
Sbjct: 803 KQDMANSIF-HRIDWYRIVLDEAHTIKSWKTQAAKATFELSSHC--RWCLTGTPLQNKLE 859
Query: 543 ELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRK 602
+L+SLL FL + E W N + ++ + ++ + ++RP +LRR
Sbjct: 860 DLYSLLCFL---------HVEPWCNWAWWSKLIQKPYENGDPRGLKLIKAILRPLMLRRT 910
Query: 603 KDEVEK------CLPEKSQVILKCDMSAWQKVYYQQVTDVGRVGLDNGSGKSKSLQN--- 653
K+ +K LP +++C+ S ++ +Y + +V D + K L N
Sbjct: 911 KETRDKEGSLILELPPTDVQVIECEQSEAERDFYTALFKRSKVQFDQFVAQGKVLHNYAN 970
Query: 654 ---LTMQLRKCCNHPYLFVGDYD 673
L ++LR+CCNHP+L + D
Sbjct: 971 ILELLLRLRQCCNHPFLVMSRAD 993
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 90/150 (60%), Gaps = 5/150 (3%)
Query: 682 RASGKFELLDRLLPKLRRAG--HRVLLFSQMTRLMDVLEIYLRLHDFKYLRLDGSTKTEE 739
+ S K L + L K++++G + ++FSQ T +D+LEI LR F++LR DG +
Sbjct: 1106 KESSKVSELLKCLEKIKKSGSGEKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQKG 1165
Query: 740 RGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIG 799
R +LK+FN + L+S +AGG+GLNL A +V + D WNP +++QA R HRIG
Sbjct: 1166 REKVLKEFNETKQKTIL-LMSLKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIG 1224
Query: 800 QKKEVRVFVLVSVGSIEEVI--LERAKQKM 827
QK+ V V + ++EE + ++ KQ+M
Sbjct: 1225 QKRTVFVRRFIVKDTVEERMQQVQARKQRM 1254
>AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein |
chr5:7565374-7570871 REVERSE LENGTH=1029
Length = 1029
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 156/358 (43%), Gaps = 79/358 (22%)
Query: 396 NGILADEMGLGKTIQTISLI-AH------------------------------------- 417
GILAD MGLGKT+ TISL+ AH
Sbjct: 414 GGILADAMGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATKF 473
Query: 418 ------LLEYKGV--TGPHLIVAPKAVLPNWMSEFSTWVPSITTVLYDGRLEERKAMKEE 469
LLE K V G +LIV P +L W +E + +Y + R +
Sbjct: 474 LGFDKRLLEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPKDAKL 533
Query: 470 LSGEGKFNVLITHYDLIMR--------DKAFLKKIHWRYLIVDEGHRLKNHESALARTLD 521
LS + +V+IT Y ++ D + + W +++DE H +KN +S ++
Sbjct: 534 LS---QSDVVITTYGVLTSEFSQENSADHEGIYAVRWFRIVLDEAHTIKNSKSQISLAA- 589
Query: 522 SGYHIQRRLLLTGTPIQNNLQELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDE 581
+ RR LTGTPIQNNL++L+SLL FL + + + PF + DE
Sbjct: 590 AALVADRRWCLTGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFEE------GDE 643
Query: 582 EQLLIIRRLHQVIRPFILRRKKDEVEK------CLPEKSQVILKCDMSAWQKVYYQQVTD 635
L +++ +++P +LRR K ++ LP ++ C++S ++ +Y +
Sbjct: 644 RGLKLVQ---SILKPIMLRRTKSSTDREGRPILVLPPADARVIYCELSESERDFYDALFK 700
Query: 636 VGRVGLDNGSGKSKSLQN------LTMQLRKCCNHPYLFVGDYDMYKRKEIVRASGKF 687
+V D + K L N L ++LR+CC+HP+L + D + ++ + S +F
Sbjct: 701 RSKVKFDQFVEQGKVLHNYASILELLLRLRQCCDHPFLVMSRGDTAEYSDLNKLSKRF 758
Score = 106 bits (265), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 90/146 (61%), Gaps = 3/146 (2%)
Query: 684 SGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDVLEIYLRLHDFKYLRLDGSTKTEERGTL 743
S K L L LR +G + +LFSQ T +D+L+I L ++F ++RLDG+ ++R +
Sbjct: 862 SSKITALLEELEGLRSSGSKSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLSQQQREKV 921
Query: 744 LKKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKE 803
LK+F+ D + L+S +AGG+G+NL A + D WNP +++QA R HRIGQ KE
Sbjct: 922 LKEFSE-DGSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKE 980
Query: 804 VRVFVLVSVGSIEEVI--LERAKQKM 827
V++ + G++EE + ++ KQ+M
Sbjct: 981 VKIRRFIVKGTVEERMEAVQARKQRM 1006
>AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1458
Length = 1458
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 93/164 (56%), Gaps = 13/164 (7%)
Query: 684 SGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDVLEIYL-------RLHDF-----KYLRL 731
SGK LL +L G + L+FSQ +D++E+YL + F + R+
Sbjct: 1093 SGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRI 1152
Query: 732 DGSTKTEERGTLLKKFNAPDSPYF-MFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQ 790
DG T++ ER L+ +FN PD+ L+STRAG LG+NL A+ VII D WNP D Q
Sbjct: 1153 DGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQ 1212
Query: 791 AEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVI 834
A RA R GQKK V + L++ G+IEE I +R K G+ A+V+
Sbjct: 1213 AIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVV 1256
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 151/339 (44%), Gaps = 47/339 (13%)
Query: 355 SAIHSIQEKITEQPSILQGGELRQYQIEGLQWM----------ISLFNNNLNGILADEMG 404
+ + I E+ P + +L+ +Q+ G+++M + + L ILA MG
Sbjct: 699 NVVREIGEEAVRVPRSI-SAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMG 757
Query: 405 LGKTIQTISLIAHLLEYKGV-TGPHLIVAPKAVLPNWMSEFSTWVPSITT---VLYDGRL 460
LGKT Q I+ + + + LIV P VL NW SEF W+PS + G +
Sbjct: 758 LGKTFQVIAFLYTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDV 817
Query: 461 EERK--------AMKEELSGEGKFNVLITHYDLIMRDKAFLKKIHWRYLIVDEGHRLKNH 512
K +K+ + G N L D+ L+ DE H +KN
Sbjct: 818 SRYKFFYERNFWGVKDLNAARGICNALRDGPDI---------------LVCDEAHIIKNT 862
Query: 513 ESALARTLDSGYHIQRRLLLTGTPIQNNLQELWSLLNFLLPNIFNSVQNFEDWFNAPFAD 572
++ + L QRR+ LTG+P+QNNL E + +++F+ S F + F P +
Sbjct: 863 KADTTQALKQ-VKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIEN 921
Query: 573 RVDVSLTDEEQLLIIRR---LHQVIRPFILRRKKDEVEKCLPEKSQVILKCDMSAWQKVY 629
++ T E+ ++ +R L++ ++ F+ R + V+K LP K+ ++ +S Q++
Sbjct: 922 GQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRIL 981
Query: 630 YQQVTDVGRVGLDNGSGKSKSLQNLTMQ---LRKCCNHP 665
YQ+ ++ G +G + +N L + NHP
Sbjct: 982 YQRFLEL--YGFSDGRTDERMRKNFFAAYQVLAQILNHP 1018
>AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 93/164 (56%), Gaps = 13/164 (7%)
Query: 684 SGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDVLEIYL-------RLHDF-----KYLRL 731
SGK LL +L G + L+FSQ +D++E+YL + F + R+
Sbjct: 1114 SGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRI 1173
Query: 732 DGSTKTEERGTLLKKFNAPDSPYF-MFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQ 790
DG T++ ER L+ +FN PD+ L+STRAG LG+NL A+ VII D WNP D Q
Sbjct: 1174 DGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQ 1233
Query: 791 AEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVI 834
A RA R GQKK V + L++ G+IEE I +R K G+ A+V+
Sbjct: 1234 AIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVV 1277
Score = 99.8 bits (247), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 159/352 (45%), Gaps = 52/352 (14%)
Query: 355 SAIHSIQEKITEQPSILQGGELRQYQIEGLQWM----------ISLFNNNLNGILADEMG 404
+ + I E+ P + +L+ +Q+ G+++M + + L ILA MG
Sbjct: 699 NVVREIGEEAVRVPRSI-SAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMG 757
Query: 405 LGKTIQTISLIAHLLEYKGV-TGPHLIVAPKAVLPNWMSEFSTWVPSITTVLYDGRLEER 463
LGKT Q I+ + + + LIV P VL NW SEF W+PS L R
Sbjct: 758 LGKTFQVIAFLYTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPL-------R 810
Query: 464 KAMKEELSGEGKFNVLI-------------THYDLI-----MRDKAFLKKIHWR------ 499
M ++S E +F++L T++ + ++D + I
Sbjct: 811 IFMLGDVSRERRFDLLTKWRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPD 870
Query: 500 YLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQELWSLLNFLLPNIFNSV 559
L+ DE H +KN ++ + L QRR+ LTG+P+QNNL E + +++F+ S
Sbjct: 871 ILVCDEAHIIKNTKADTTQALKQ-VKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 929
Query: 560 QNFEDWFNAPFADRVDVSLTDEEQLLIIRR---LHQVIRPFILRRKKDEVEKCLPEKSQV 616
F + F P + ++ T E+ ++ +R L++ ++ F+ R + V+K LP K+
Sbjct: 930 PEFRNRFQNPIENGQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 989
Query: 617 ILKCDMSAWQKVYYQQVTDVGRVGLDNGSGKSKSLQNLTMQ---LRKCCNHP 665
++ +S Q++ YQ+ ++ G +G + +N L + NHP
Sbjct: 990 VISVKLSPLQRILYQRFLEL--YGFSDGRTDERMRKNFFAAYQVLAQILNHP 1039
>AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 93/164 (56%), Gaps = 13/164 (7%)
Query: 684 SGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDVLEIYL-------RLHDF-----KYLRL 731
SGK LL +L G + L+FSQ +D++E+YL + F + R+
Sbjct: 1114 SGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRI 1173
Query: 732 DGSTKTEERGTLLKKFNAPDSPYF-MFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQ 790
DG T++ ER L+ +FN PD+ L+STRAG LG+NL A+ VII D WNP D Q
Sbjct: 1174 DGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQ 1233
Query: 791 AEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVI 834
A RA R GQKK V + L++ G+IEE I +R K G+ A+V+
Sbjct: 1234 AIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVV 1277
Score = 99.8 bits (247), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 159/352 (45%), Gaps = 52/352 (14%)
Query: 355 SAIHSIQEKITEQPSILQGGELRQYQIEGLQWM----------ISLFNNNLNGILADEMG 404
+ + I E+ P + +L+ +Q+ G+++M + + L ILA MG
Sbjct: 699 NVVREIGEEAVRVPRSI-SAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMG 757
Query: 405 LGKTIQTISLIAHLLEYKGV-TGPHLIVAPKAVLPNWMSEFSTWVPSITTVLYDGRLEER 463
LGKT Q I+ + + + LIV P VL NW SEF W+PS L R
Sbjct: 758 LGKTFQVIAFLYTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPL-------R 810
Query: 464 KAMKEELSGEGKFNVLI-------------THYDLI-----MRDKAFLKKIHWR------ 499
M ++S E +F++L T++ + ++D + I
Sbjct: 811 IFMLGDVSRERRFDLLTKWRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPD 870
Query: 500 YLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQELWSLLNFLLPNIFNSV 559
L+ DE H +KN ++ + L QRR+ LTG+P+QNNL E + +++F+ S
Sbjct: 871 ILVCDEAHIIKNTKADTTQALKQ-VKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 929
Query: 560 QNFEDWFNAPFADRVDVSLTDEEQLLIIRR---LHQVIRPFILRRKKDEVEKCLPEKSQV 616
F + F P + ++ T E+ ++ +R L++ ++ F+ R + V+K LP K+
Sbjct: 930 PEFRNRFQNPIENGQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 989
Query: 617 ILKCDMSAWQKVYYQQVTDVGRVGLDNGSGKSKSLQNLTMQ---LRKCCNHP 665
++ +S Q++ YQ+ ++ G +G + +N L + NHP
Sbjct: 990 VISVKLSPLQRILYQRFLEL--YGFSDGRTDERMRKNFFAAYQVLAQILNHP 1039
>AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 93/164 (56%), Gaps = 13/164 (7%)
Query: 684 SGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDVLEIYL-------RLHDF-----KYLRL 731
SGK LL +L G + L+FSQ +D++E+YL + F + R+
Sbjct: 1114 SGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRI 1173
Query: 732 DGSTKTEERGTLLKKFNAPDSPYF-MFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQ 790
DG T++ ER L+ +FN PD+ L+STRAG LG+NL A+ VII D WNP D Q
Sbjct: 1174 DGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQ 1233
Query: 791 AEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVI 834
A RA R GQKK V + L++ G+IEE I +R K G+ A+V+
Sbjct: 1234 AIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVV 1277
Score = 99.8 bits (247), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 159/352 (45%), Gaps = 52/352 (14%)
Query: 355 SAIHSIQEKITEQPSILQGGELRQYQIEGLQWM----------ISLFNNNLNGILADEMG 404
+ + I E+ P + +L+ +Q+ G+++M + + L ILA MG
Sbjct: 699 NVVREIGEEAVRVPRSI-SAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMG 757
Query: 405 LGKTIQTISLIAHLLEYKGV-TGPHLIVAPKAVLPNWMSEFSTWVPSITTVLYDGRLEER 463
LGKT Q I+ + + + LIV P VL NW SEF W+PS L R
Sbjct: 758 LGKTFQVIAFLYTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPL-------R 810
Query: 464 KAMKEELSGEGKFNVLI-------------THYDLI-----MRDKAFLKKIHWR------ 499
M ++S E +F++L T++ + ++D + I
Sbjct: 811 IFMLGDVSRERRFDLLTKWRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPD 870
Query: 500 YLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQELWSLLNFLLPNIFNSV 559
L+ DE H +KN ++ + L QRR+ LTG+P+QNNL E + +++F+ S
Sbjct: 871 ILVCDEAHIIKNTKADTTQALKQ-VKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 929
Query: 560 QNFEDWFNAPFADRVDVSLTDEEQLLIIRR---LHQVIRPFILRRKKDEVEKCLPEKSQV 616
F + F P + ++ T E+ ++ +R L++ ++ F+ R + V+K LP K+
Sbjct: 930 PEFRNRFQNPIENGQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 989
Query: 617 ILKCDMSAWQKVYYQQVTDVGRVGLDNGSGKSKSLQNLTMQ---LRKCCNHP 665
++ +S Q++ YQ+ ++ G +G + +N L + NHP
Sbjct: 990 VISVKLSPLQRILYQRFLEL--YGFSDGRTDERMRKNFFAAYQVLAQILNHP 1039
>AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 |
chr2:9179622-9182356 REVERSE LENGTH=816
Length = 816
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 131/514 (25%), Positives = 221/514 (42%), Gaps = 74/514 (14%)
Query: 375 ELRQYQIEGLQWMISLFNNNLNG------ILADEMGLGKTIQTISLIAHLLEYKGVTGPH 428
E+R +Q EG +++ NNL ILA G GKT IS + + P
Sbjct: 264 EMRPHQTEGFRFLC----NNLAADEPGGCILAHAPGSGKTFLLISFLQSFMAMDPQARP- 318
Query: 429 LIVAPKAVLPNWMSEFSTW-VPSITTV-LYDGRLEERKAMKEELS-----------GEGK 475
L+V PK ++ +W EF+ W V I + Y + E RK + L G +
Sbjct: 319 LVVLPKGIIESWKREFTLWEVEKIPLLDFYSVKAESRKQQLKVLGQWIKERSILFLGYQQ 378
Query: 476 FNVLIT--HYDLIMRDKAFLKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLLLT 533
F +I +++ D + LI+DEGH +N E+ + +L + +R+++LT
Sbjct: 379 FTRIICDDNFEAASEDCKLILLEKPTLLILDEGHTSRNKETYMLSSL-ARVKTRRKVVLT 437
Query: 534 GTPIQNNLQELWSLLNFLLPNIF-------------------------NSVQNFEDWFNA 568
GT QNN++E++++L+ + P S + E F A
Sbjct: 438 GTLFQNNVEEVFNILDLVRPKFLKRPGTREIVSRIMSKAEIPRGKQVNQSSSSIEGTFFA 497
Query: 569 PFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKDEVEKCLPEKSQVILKCDMSAWQK- 627
+ S + +I+ L ++ R IL K + LP S+ + ++S+ Q+
Sbjct: 498 AVELTLQRSTNFSAKASLIKDLREMTRN-ILHYHKADFSGLLPGLSEFTVMLNLSSIQRD 556
Query: 628 --------VYYQQVTDVGRVGLDNGSGKSKSLQNLTMQLRKCCNHPYLFVGDYDMYKRKE 679
++Q++ +G + KS +N + K + V D +K
Sbjct: 557 EVKGLRKMELFKQIS-LGAALYIHPKLKSFLEENPS-NGEKGFSDNNTTVMKLDKMLKKI 614
Query: 680 IVRASGKFELLDRLLPKLRRAGHRVLLFSQ-------MTRLMDVLEIYLRLHDFKYLRLD 732
VR K + LL G ++L+FSQ + RLM ++ + RL + +
Sbjct: 615 NVRDGVKMKFFLNLLALCESTGEKLLVFSQYIVPIKTLERLMSSMKGW-RLGK-EMFTIT 672
Query: 733 GSTKTEERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAE 792
G + E+R +++FN +F S +A G G++L A V+I D NP + QQA
Sbjct: 673 GDSSNEQREWSMERFNNSLEAK-VFFGSIKACGEGISLVGASRVLILDVHLNPSVTQQAV 731
Query: 793 DRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQK 826
RA+R GQK++V + LV+ S EE E +K
Sbjct: 732 ARAYRPGQKRKVYAYKLVAADSPEEENYETCTRK 765
>AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 |
chr1:1618795-1623195 REVERSE LENGTH=1410
Length = 1410
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 155/339 (45%), Gaps = 34/339 (10%)
Query: 501 LIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQELWSLLNFLLPNIFNSVQ 560
L++DE H +N S + +TL S Q+R+LL+GTP QNN EL ++L P +
Sbjct: 1008 LVLDEAHTPRNQRSCIWKTL-SKVETQKRILLSGTPFQNNFLELCNVLGLARPKYLERLT 1066
Query: 561 NFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKDEVEKCLPEKSQVILKC 620
+ R +L +E I L V+ PF+ K ++ LP + ++
Sbjct: 1067 STLKKSGMTVTKRGKKNLGNEINNRGIEELKAVMLPFVHVHKGSILQSSLPGLRECVVVL 1126
Query: 621 DMSAWQKVYYQQVTDVGRVGLDNGSGKSKSLQNLTMQLRKCCNHPYLF----VGDYDMYK 676
+ Q+ + + + K+K++ +L HP L + + +
Sbjct: 1127 NPPELQRRVLESIEVTH-------NRKTKNVFETEHKLSLVSVHPSLVSRCKISEKERLS 1179
Query: 677 RKEIVRA-----------SGKFELLDRLLPKLRRAGHRVLLFSQMTRLMDVLEIYLR--L 723
E + A S K L + +VL+FSQ +D L++ ++ +
Sbjct: 1180 IDEALLAQLKKVRLDPNQSVKTRFLMEFVELCEVIKEKVLVFSQY---IDPLKLIMKHLV 1236
Query: 724 HDFKY------LRLDGSTKTEERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVI 777
FK+ L + G + ++R TL+ +FN P S +FL ST+A G++L A VI
Sbjct: 1237 SRFKWNPGEEVLYMHGKLEQKQRQTLINEFNDPKSKAKVFLASTKACSEGISLVGASRVI 1296
Query: 778 IFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIE 816
+ D WNP +++QA RA+RIGQK+ V + LV+ G+ E
Sbjct: 1297 LLDVVWNPAVERQAISRAYRIGQKRIVYTYHLVAKGTPE 1335
>AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / HNH endonuclease
domain-containing protein | chr5:2491412-2498484 REVERSE
LENGTH=1190
Length = 1190
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 117/525 (22%), Positives = 219/525 (41%), Gaps = 73/525 (13%)
Query: 343 SRDLLEGQRQYNSAIHSIQEKITEQPSILQ---GGELRQYQIEGLQWMISLFNNNLNGIL 399
S+ + G+ Q H +EK+ + L L +Q++GL++ + +
Sbjct: 168 SQSYISGKWQPCLPEHYTEEKVEQLIETLPRKLVNALLPFQLDGLRFGL---RRGGRCFI 224
Query: 400 ADEMGLGKTIQTISLIAHLLEYKGVTGPHLIVAPKAVLPNWMSEFSTWVPSITTV---LY 456
ADEMGLGKT+Q I++ + G L+V P + W E W+PS L
Sbjct: 225 ADEMGLGKTLQAIAIAGCFIS----EGSILVVCPAVLRFTWAEELERWLPSCLPSDVHLV 280
Query: 457 DGRLEERKAMKEELSGEGKFNVLITHYDLIMRDKAFLKKIHWRYLIVDEGHRL-----KN 511
G + + V++ Y ++ + + + W LIVDE H L K+
Sbjct: 281 FGHQDNPAYLPRWP------KVVVISYKMLQHLRTTMLEREWALLIVDESHHLRCSKKKS 334
Query: 512 HESALARTLDSGYHIQRRLLLTGTPIQNNLQELWSLLNFLLPNIFN-------------- 557
+ LD ++ +LL+GTP + +++ +N L P +
Sbjct: 335 DPPEIKTVLDVAEKVKHIILLSGTPSVSRPFDIFHQINMLWPGLLGKDKYEFAKTYCEVG 394
Query: 558 ---SVQN--FEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKDEVEKCLPE 612
+Q F+D+ +++ L Q ++IRRL Q + L K+ ++ L +
Sbjct: 395 LVRGIQGKIFQDFSKGTRLLELNILLN---QTVMIRRLKQHLL-TQLPPKRRQIVTILLK 450
Query: 613 KSQVILKCDMSAWQKV----YYQQVTD--------------VGRVGLDNGSGKSKSLQNL 654
KS + L + + K +VT+ G V +N G + +N
Sbjct: 451 KSDIALAMAIVSEAKKQKDGAIAEVTEKSHEPDQNARGSNEAGHVNAENSDGPNSDKEN- 509
Query: 655 TMQLRKCCNHPYLFVGDYDMYKRKEIVRASGKFELLDRLLPKLR--RAGHRVLLFSQMTR 712
QL C Y +G + +E + LD ++ R+ ++++F+ +
Sbjct: 510 --QL--CGKLSYQQLGIAKLSAFREWLSLHPLLSGLDYTPEEIDGDRSSTKMVVFAHHHK 565
Query: 713 LMDVLEIYLRLHDFKYLRLDGSTKTEERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQT 772
++D ++ ++ ++R+DG+T +R ++ F S + ++ AGG+GL+
Sbjct: 566 VLDGIQEFICDKGIGFVRIDGTTLPRDRQLAVQSFQF-SSEVKIAIIGVEAGGVGLDFSA 624
Query: 773 ADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEE 817
A V+ + P + QAEDRAHR GQ V V++ + +++E
Sbjct: 625 AQNVVFLELPKTPSLLLQAEDRAHRRGQTSAVNVYIFCAKDTMDE 669
>AT5G05130.1 | Symbols: | DNA/RNA helicase protein |
chr5:1512173-1514918 FORWARD LENGTH=862
Length = 862
Score = 96.7 bits (239), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 79/123 (64%), Gaps = 1/123 (0%)
Query: 705 LLFSQMTRLMDVLEIYLRLHDFKYLRLDGSTKTEERGTLLKKFNAPD-SPYFMFLLSTRA 763
++FSQ +++ +LE L+ F LRLDG+ ++R ++ +F P+ + + L S +A
Sbjct: 710 VVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPVVLLASLKA 769
Query: 764 GGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERA 823
G G+NL A V +FD WNP +++QA DR HRIGQK+EV++ +++ SIEE +LE
Sbjct: 770 SGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLELQ 829
Query: 824 KQK 826
++K
Sbjct: 830 QKK 832
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 123/536 (22%), Positives = 215/536 (40%), Gaps = 116/536 (21%)
Query: 315 LPESDASKNGVSKESPLDEEIDSDHNGDSRDLLEGQRQYNSAIHSIQEKIT-EQPSILQG 373
+ ESD S G+S+ + E++ NGD R + + + + + + + + E P +
Sbjct: 154 ISESDTS-FGLSEAVVVKEQMG---NGDKRSVDKIFKLVDENVKLMGKLVAAEPPREVIK 209
Query: 374 GELRQYQIEGLQWMI----------------SLFNNNLN-------------GILADEMG 404
EL +Q EGL W++ F N L G+ AD+MG
Sbjct: 210 SELFAHQKEGLGWLLHREKSGELPPFWEEKDGEFLNTLTNYRSDKRPDPLRGGVFADDMG 269
Query: 405 LGKTIQTISLIAH------------------------------------------LLEYK 422
LGKT+ +SLIA L+
Sbjct: 270 LGKTLTLLSLIAFDRYGNASTSTPTEEPLDGEGDKIEKKGKKRGRGKSSESVTRKKLKTD 329
Query: 423 GVTGPH------LIVAPKAVLPNWMSEFST-WVPSITTV-LYDGRLEERKAMKEELSGEG 474
V G + LIV P +V+ W+++ VP I V +Y G ER EL
Sbjct: 330 DVVGMNVSQKTTLIVCPPSVISAWITQLEEHTVPGILKVYMYHG--GERTDDVNELM--- 384
Query: 475 KFNVLITHYDLIMRDKAF----LKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRL 530
K+++++T Y + ++++ +KK+ W +I+DE H +KN + +R + RR
Sbjct: 385 KYDIVLTTYGTLAVEESWEDSPVKKMEWLRIILDEAHTIKNANAQQSRVV-CKLKASRRW 443
Query: 531 LLTGTPIQNNLQELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRL 590
+TGTPIQN +L+SL+ FL F+ ++ P L+ RL
Sbjct: 444 AVTGTPIQNGSFDLYSLMAFLRFEPFSIKSYWQSLIQRPLGQGNKKGLS---------RL 494
Query: 591 HQVIRPFILRRKKDEVEKCLPEKSQVILKCDMSAWQKVYYQ----QVTDVGRVGLDNGS- 645
++ LRR K++ LP K+ ++S ++ Y + V + ++NGS
Sbjct: 495 QVLMATISLRRTKEKSLIGLPPKTVETCYVELSPEERQLYDHMEGEAKGVVQNLINNGSL 554
Query: 646 -GKSKSLQNLTMQLRKCCNHPYLFVGDYDMYKRKEIVR-ASGKFELLDRLLPKLRRAG-- 701
++ ++ ++LR+ C+ L + + V + K ELL +L+ L+
Sbjct: 555 MRNYSTVLSIILRLRQLCDDMSLCPPELRSFTTSTSVEDVTDKPELLQKLVAALQDGEDF 614
Query: 702 HRVLLFSQMTRLM--DVLEIYLRLHDFKYLRLDGSTKTEERGTLLKK--FNAPDSP 753
+ S T ++ I+ R + L+ RG+L + +NAP P
Sbjct: 615 DCPICISPPTNIIITRCAHIFCRACILQTLQRSKPLCPLCRGSLTQSDLYNAPPPP 670
>AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:576046-580299
FORWARD LENGTH=678
Length = 678
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 141/331 (42%), Gaps = 64/331 (19%)
Query: 376 LRQYQIEGLQW-MISLFNNNLNGILADEMGLGKTIQTISLIAHLLEY-----KGVTGPHL 429
L +YQ E L W I + GILADEMG+GKTIQ ISL+ E + G L
Sbjct: 134 LLKYQKEFLAWATIQELSAVRGGILADEMGMGKTIQAISLVLARREVDRAKSREAVGHTL 193
Query: 430 IVAPKAVLPNWMSEFSTWV-PSITTVL-YDGRLEERKAMKEELSGEGKFNVLITHYDLIM 487
++ P L W+ E S P T VL Y G ++ K + +YD ++
Sbjct: 194 VLVPPVALSQWLDEISRLTSPGSTRVLQYHGPKRDKNVQK------------LMNYDFVL 241
Query: 488 RDKAF-----------------LKKIHWRYLIVDEGHRLKNHESALAR---TLDSGYHIQ 527
L I W +IVDE H +KN S A+ L++ Y
Sbjct: 242 TTSPIVENEYRKDEGVDETMSPLHSIKWNRIIVDEAHDIKNRSSRTAKAVFALEATY--- 298
Query: 528 RRLLLTGTPIQNNLQELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLII 587
R L+GTP+QN++ EL+SL+++ N F S A FA R +T + +
Sbjct: 299 -RWALSGTPLQNDVDELYSLVSYSFLNFFYSTY-------ASFAFR-HTHITFARNVTVK 349
Query: 588 RRLHQVIRPFILRRKKDEVEKCLPEKSQVIL----KCDMSAWQKVYYQQVTDVGRVGLDN 643
+ I P + + + V L + L + +S + +Y+ + V + D
Sbjct: 350 FLIGGNILPLSIPVRIENVPAVLIMQINTSLGGKRRDALSVVEADFYESLYKVSKTTFD- 408
Query: 644 GSGKSKSLQN-------LTMQLRKCCNHPYL 667
G ++ +L N L ++LR+ +HPYL
Sbjct: 409 GYIQAGTLMNNYAHIFGLLIRLRQAVDHPYL 439
Score = 83.2 bits (204), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 3/125 (2%)
Query: 703 RVLLFSQMTRLMDVLEIYLRLHDFKYLRLDGSTKTEERGTLLKKFNA-PDSPYFMFLLST 761
+ ++FSQ T +D++ L ++L GS + LK F PD + L+S
Sbjct: 527 KAIVFSQFTSFLDLISYALGKSGVSCVQLVGSMSKAAKDAALKNFKEEPDCR--VLLMSL 584
Query: 762 RAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILE 821
+AGG+ LNL A V + D WNP +++QA+DR HRIGQ K VRV + ++EE IL
Sbjct: 585 QAGGVALNLTAASHVFMMDPWWNPAVERQAQDRIHRIGQCKPVRVVRFIMEKTVEEKILT 644
Query: 822 RAKQK 826
K+K
Sbjct: 645 LQKKK 649
>AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr3:5652839-5655670 REVERSE LENGTH=638
Length = 638
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 133/317 (41%), Gaps = 100/317 (31%)
Query: 353 YNSAIHSIQEKITEQ---PSILQGGELRQYQIEGLQWMIS---LFNNNLNGILADEMGLG 406
Y +A+ +++ TE+ P +L +R +I L WM + L GILAD+ GLG
Sbjct: 28 YQAALQDLKQPKTEKDLPPGVLTVPLMRHQKI-ALNWMRKKEKRSRHCLGGILADDQGLG 86
Query: 407 KTIQTISLIAHLLEY----------KGV-TGPHLIVAPKAVLPNWMSEFSTWVPSITTVL 455
KTI TISLI LL+ KG +G LIV P +V+ W E
Sbjct: 87 KTISTISLI--LLQKLKSQSKQRKRKGQNSGGTLIVCPASVVKQWARE------------ 132
Query: 456 YDGRLEERKAMKEELSGEGKFNVLITH-------------YDLIMRDKAF---------- 492
+KE++S E K +VL+ H YD++M A
Sbjct: 133 ----------VKEKVSDEHKLSVLVHHGSHRTKDPTEIAIYDVVMTTYAIVTNEVPQNPM 182
Query: 493 -------------------------LKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQ 527
L ++ W +++DE H +KNH + +A+ S +
Sbjct: 183 LNRYDSMRGRESLDGSSLIQPHVGALGRVRWLRVVLDEAHTIKNHRTLIAKACFS-LRAK 241
Query: 528 RRLLLTGTPIQNNLQELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLII 587
RR LTGTPI+N + +L+S FL + + +F AP D++ L
Sbjct: 242 RRWCLTGTPIKNKVDDLYSYFRFLRYHPYAMCNSFHQRIKAPI---------DKKPLHGY 292
Query: 588 RRLHQVIRPFILRRKKD 604
++L ++R +LRR K+
Sbjct: 293 KKLQAILRGIMLRRTKE 309
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 46/78 (58%)
Query: 757 FLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIE 816
L+S +AG LGLN+ A VI+ D WNP + QA DRAHRIGQ + V V + ++E
Sbjct: 510 MLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAIDRAHRIGQTRAVTVTRIAIKNTVE 569
Query: 817 EVILERAKQKMGIDAKVI 834
E IL ++K I A +
Sbjct: 570 ERILTLHERKRNIVASAL 587
>AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr1:3703934-3709302 REVERSE LENGTH=1226
Length = 1226
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 153/356 (42%), Gaps = 81/356 (22%)
Query: 376 LRQYQIEGLQWMI---SLFNNNLNGILADEMGLGKTIQTISLIA---------------- 416
L ++Q L WM + N GILAD+ GLGKT+ TI+LI
Sbjct: 542 LLRHQRIALSWMSQKETSGNPCFGGILADDQGLGKTVSTIALILTERSTPYLPCEEDSKN 601
Query: 417 ---------------------HLLEYKG-VTGPHLIVAPKAVLPNWMSEF---STWVPSI 451
L + +G LIV P +++ W E T +
Sbjct: 602 GGCNQSDHSQVVFNENKVVEDSLCKMRGRPAAGTLIVCPTSLMRQWADELRKKVTLEAHL 661
Query: 452 TTVLYDGRLEERKAMKEELSGEGKFNVLITHYDLIMRDKAF-----------LKKIHWRY 500
+ ++Y G R EL+ K++V+IT Y L+ + K L ++ W
Sbjct: 662 SVLVYHGC--SRTKDPHELA---KYDVVITTYSLVSKRKHMDCEPVEFLSGPLAQVSWFR 716
Query: 501 LIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQELWSLLNFLLPNIFNSVQ 560
+++DE +KN+++ A SG H +RR L+GTPIQN++ +L+S FL + ++S Q
Sbjct: 717 VVLDEAQSIKNYKTQ-ASIACSGLHAKRRWCLSGTPIQNSIADLYSYFRFLKYDPYSSYQ 775
Query: 561 NFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKDEVEK-----CLPEKSQ 615
F + P + S E + L +++ +LRR KD + LP KS
Sbjct: 776 TFCETIKNPIS-----SYPGEG----YKTLQAILKKVMLRRTKDTLLDGKPVISLPPKSI 826
Query: 616 VILKCDMSAWQKVYYQQVT----DVGRVGLDNGSGKSKSLQNLTM--QLRKCCNHP 665
+ + D + ++ +Y ++ D + + G+ K + L M +LR+ C HP
Sbjct: 827 ELRRVDFTKEERDFYSKLECDSRDQFKEYAEAGTVKQNYVNILLMLLRLRQACGHP 882
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 76/131 (58%), Gaps = 5/131 (3%)
Query: 700 AGHRVLLFSQMTRLMDVLEIYLRLHDFKYLRLDGSTKTEERGTLLKKFNA-PDSPYFMFL 758
AG + ++F+Q T+++D+LE L+ +Y R DG R ++ FN PD + +
Sbjct: 1070 AGEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPD--VSVMI 1127
Query: 759 LSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEV 818
+S +A LGLN+ A VI+ D WNP + QA DRAHRIGQ + V+V ++E+
Sbjct: 1128 MSLKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDTVEDR 1187
Query: 819 I--LERAKQKM 827
I L++ K+KM
Sbjct: 1188 ILALQQKKRKM 1198
>AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domain |
chr1:1471624-1476067 REVERSE LENGTH=833
Length = 833
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 72/130 (55%), Gaps = 3/130 (2%)
Query: 698 RRAGHRVLLFSQMTRLMDVLEIYLRLHDFKYLRLDGSTKTEERGTLLKKFNA-PDSPYFM 756
R + ++FSQ T +D++ L ++L GS R T + KF PD +
Sbjct: 677 RDGSAKAIVFSQFTSFLDLINYTLGKCGVSCVQLVGSMTMAARDTAINKFKEDPDCR--V 734
Query: 757 FLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIE 816
FL+S +AGG+ LNL A V + D WNP +++QA+DR HRIGQ K +RV + ++E
Sbjct: 735 FLMSLKAGGVALNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQYKPIRVVRFIIENTVE 794
Query: 817 EVILERAKQK 826
E IL K+K
Sbjct: 795 ERILRLQKKK 804
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 75/175 (42%), Gaps = 32/175 (18%)
Query: 352 QYNSAIHSIQEKITEQPSILQGGELRQYQIEGLQWMISLFNNNLNGILADEMGLGKTIQT 411
Q+N+ I + E PS L LR YQ E L W + GILADEMG+GKTIQ
Sbjct: 120 QHNAVI----AETAEPPSDLIMPLLR-YQKEFLAWATKQEQSVAGGILADEMGMGKTIQA 174
Query: 412 ISLI--------AHLLEYKGVTGPHLIVAPKAVLPNWMSEFSTWV-PSITTVLYDGRLEE 462
ISL+ A E G T L++ P + W++E + + P T VL +
Sbjct: 175 ISLVLARREVDRAQFGEAAGCT---LVLCPLVAVSQWLNEIARFTSPGSTKVLVYHGAKR 231
Query: 463 RKAMKE------------ELSGEGKFNVLITHYDLIMRDKAFLKK---IHWRYLI 502
K +KE + E + N++ + K+F K IH RY
Sbjct: 232 AKNIKEFMNYDFVLTTYSTVESEYRRNIMPSKVQCAYCSKSFYPKKLVIHLRYFC 286
>AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1269
Length = 1269
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 76/131 (58%), Gaps = 5/131 (3%)
Query: 700 AGHRVLLFSQMTRLMDVLEIYLRLHDFKYLRLDGSTKTEERGTLLKKFNA-PDSPYFMFL 758
AG + ++F+Q T+++D+LE L+ +Y R DG R ++ FN PD + +
Sbjct: 1113 AGEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPD--VSVMI 1170
Query: 759 LSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEV 818
+S +A LGLN+ A VI+ D WNP + QA DRAHRIGQ + V+V ++E+
Sbjct: 1171 MSLKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDTVEDR 1230
Query: 819 I--LERAKQKM 827
I L++ K+KM
Sbjct: 1231 ILALQQKKRKM 1241
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 21/184 (11%)
Query: 493 LKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQELWSLLNFLL 552
L ++ W +++DE +KN+++ A SG H +RR L+GTPIQN++ +L+S FL
Sbjct: 752 LAQVSWFRVVLDEAQSIKNYKTQ-ASIACSGLHAKRRWCLSGTPIQNSIADLYSYFRFLK 810
Query: 553 PNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKDEVEK---- 608
+ ++S Q F + P + S E + L +++ +LRR KD +
Sbjct: 811 YDPYSSYQTFCETIKNPIS-----SYPGEG----YKTLQAILKKVMLRRTKDTLLDGKPV 861
Query: 609 -CLPEKSQVILKCDMSAWQKVYYQQVT----DVGRVGLDNGSGKSKSLQNLTM--QLRKC 661
LP KS + + D + ++ +Y ++ D + + G+ K + L M +LR+
Sbjct: 862 ISLPPKSIELRRVDFTKEERDFYSKLECDSRDQFKEYAEAGTVKQNYVNILLMLLRLRQA 921
Query: 662 CNHP 665
C HP
Sbjct: 922 CGHP 925
>AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22539756 REVERSE
LENGTH=1122
Length = 1122
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 73/130 (56%), Gaps = 1/130 (0%)
Query: 697 LRRAGHRVLLFSQMTRLMDVLEIYLRLHDFKYLRLDGSTKTEERGTLLKKFNAPDSPYFM 756
++ AG + ++FSQ T+++++LE L +Y RLDG+ R ++ FN M
Sbjct: 961 IKVAGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTLPEVTVM 1020
Query: 757 FLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIE 816
++S +A LGLN+ A V++ D WNP + QA DRAHRIGQ + V V ++E
Sbjct: 1021 -IMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTVE 1079
Query: 817 EVILERAKQK 826
+ IL ++K
Sbjct: 1080 DRILALQQKK 1089
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 21/193 (10%)
Query: 493 LKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQELWSLLNFLL 552
L K+ W +++DE +KN+++ +AR G +RR L+GTPIQN++ +L+S FL
Sbjct: 624 LAKVSWFRVVLDEAQSIKNYKTQVARAC-WGLRAKRRWCLSGTPIQNSIDDLYSYFRFLK 682
Query: 553 PNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKDEVEK---- 608
+ ++S F P + ++L +++ +LRR K +
Sbjct: 683 YDPYSSYVLFCSTIKNPIT---------RNPVKGYQKLQAILKTVMLRRTKGSLLDGKPI 733
Query: 609 -CLPEKSQVILKCDMSAWQKVYYQQVTDVGRVGL----DNGSGKSKSLQNLTM--QLRKC 661
LP KS + K D + ++ +Y ++ R + G+ K + L M +LR+
Sbjct: 734 ISLPPKSIELRKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQA 793
Query: 662 CNHPYLFVGDYDM 674
C+HP L G+Y
Sbjct: 794 CDHPLLVNGEYSF 806
>AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22540610 REVERSE
LENGTH=1280
Length = 1280
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 73/130 (56%), Gaps = 1/130 (0%)
Query: 697 LRRAGHRVLLFSQMTRLMDVLEIYLRLHDFKYLRLDGSTKTEERGTLLKKFNAPDSPYFM 756
++ AG + ++FSQ T+++++LE L +Y RLDG+ R ++ FN M
Sbjct: 1119 IKVAGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTLPEVTVM 1178
Query: 757 FLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIE 816
++S +A LGLN+ A V++ D WNP + QA DRAHRIGQ + V V ++E
Sbjct: 1179 -IMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTVE 1237
Query: 817 EVILERAKQK 826
+ IL ++K
Sbjct: 1238 DRILALQQKK 1247
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 21/191 (10%)
Query: 493 LKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQELWSLLNFLL 552
L K+ W +++DE +KN+++ +AR G +RR L+GTPIQN++ +L+S FL
Sbjct: 782 LAKVSWFRVVLDEAQSIKNYKTQVARAC-WGLRAKRRWCLSGTPIQNSIDDLYSYFRFLK 840
Query: 553 PNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKDEVEK---- 608
+ ++S F P + ++L +++ +LRR K +
Sbjct: 841 YDPYSSYVLFCSTIKNPIT---------RNPVKGYQKLQAILKTVMLRRTKGSLLDGKPI 891
Query: 609 -CLPEKSQVILKCDMSAWQKVYYQQVTDVGRVGL----DNGSGKSKSLQNLTM--QLRKC 661
LP KS + K D + ++ +Y ++ R + G+ K + L M +LR+
Sbjct: 892 ISLPPKSIELRKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQA 951
Query: 662 CNHPYLFVGDY 672
C+HP L G+Y
Sbjct: 952 CDHPLLVNGEY 962
>AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr1:18672828-18677365 FORWARD LENGTH=981
Length = 981
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 77/128 (60%), Gaps = 5/128 (3%)
Query: 703 RVLLFSQMTRLMDVLEIYLRLHDFKYLRLDGSTKTEERGTLLKKF-NAPDSPYFMFLLST 761
+ ++FSQ T ++D++E+ L + ++ RLDG+ R +K+F N PD + ++S
Sbjct: 828 KTIIFSQWTGMLDLVELSLIENSIEFRRLDGTMSLIARDRAVKEFSNDPD--VKVMIMSL 885
Query: 762 RAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVI-- 819
+AG LGLN+ A VI+ D WNP + QA DRAHRIGQ + V V + ++E+ I
Sbjct: 886 KAGNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKNTVEDRILA 945
Query: 820 LERAKQKM 827
L+ K+KM
Sbjct: 946 LQEEKRKM 953
Score = 73.9 bits (180), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 21/191 (10%)
Query: 489 DKAFLKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQELWSLL 548
D L K+ W +++DE +KNH + +AR G +RR L+GTPIQN + +L+S
Sbjct: 462 DSGTLAKVGWFRVVLDEAQTIKNHRTQVARAC-CGLRAKRRWCLSGTPIQNTIDDLYSYF 520
Query: 549 NFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKDEVEK 608
FL + + ++F P + L ++L V+R +LRR K +
Sbjct: 521 RFLKYDPYAVYKSFCHQIKGPIS---------RNSLQGYKKLQAVLRAIMLRRTKGTLLD 571
Query: 609 C-----LPEKSQVILKCDMSAWQKVYYQQVTDVGRVGLDNGSGKSKSLQN------LTMQ 657
LP K+ + + D S ++ +Y ++ R + QN + ++
Sbjct: 572 GQPIINLPPKTINLSQVDFSVEERSFYVKLESDSRSQFKAYAAAGTLNQNYANILLMLLR 631
Query: 658 LRKCCNHPYLF 668
LR+ C+HP L
Sbjct: 632 LRQACDHPQLV 642
>AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr3:6971352-6976340 FORWARD LENGTH=1047
Length = 1047
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Query: 703 RVLLFSQMTRLMDVLEIYLRLHDFKYLRLDGSTKTEERGTLLKKFNA-PDSPYFMFLLST 761
+ ++FSQ T ++D++E+ + ++ RLDG+ R +K+F+ PD + L+S
Sbjct: 894 KTIIFSQWTGMLDLVELRILESGIEFRRLDGTMSLAARDRAVKEFSKKPD--VKVMLMSL 951
Query: 762 RAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILE 821
+AG LGLN+ A VI+ D WNP + QA DRAHRIGQ + V V + ++E+ IL+
Sbjct: 952 KAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRILK 1011
Query: 822 RAKQK 826
++K
Sbjct: 1012 LQEEK 1016
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 21/191 (10%)
Query: 489 DKAFLKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQELWSLL 548
D L K+ W +++DE +KN+ + +AR+ + +RR L+GTPIQN + +L+S
Sbjct: 533 DCGPLGKVGWFRIVLDEAQTIKNYRTQMARSCCT-LRAKRRWCLSGTPIQNTIDDLYSYF 591
Query: 549 NFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKDEVEK 608
FL + + ++F P + ++L V+R +LRR K +
Sbjct: 592 RFLRYDPYAVYKSFYSTIKVPIS---------RNSCQGYKKLQAVLRAIMLRRTKGTLLD 642
Query: 609 C-----LPEKSQVILKCDMSAWQKVYYQQVTDVGRVGL----DNG--SGKSKSLQNLTMQ 657
LP K + + D S ++ +Y+++ R D G S ++ L ++
Sbjct: 643 GKPIINLPPKVVNLSQVDFSVAERSFYKKLEADSRSQFKAYADAGTLSQNYANILLLLLR 702
Query: 658 LRKCCNHPYLF 668
LR+ C+HP L
Sbjct: 703 LRQACDHPQLV 713
>AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 |
chr3:8832085-8835722 REVERSE LENGTH=1132
Length = 1132
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 149/335 (44%), Gaps = 46/335 (13%)
Query: 501 LIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQELWSLLNFLLP----NIF 556
L++DEGH +N S + + L + ++R+ L+GT QNN +EL ++L P I
Sbjct: 744 LVLDEGHTPRNQSSLIWKVL-TEVRTEKRIFLSGTLFQNNFKELSNVLCLARPADKDTIS 802
Query: 557 NSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKDEVEKCLPEKSQV 616
+ + RV+ EE ++ L +I F+ + +++ LP
Sbjct: 803 SRIHELSKCSQEGEHGRVN-----EENRIV--DLKAMIAHFVHVHEGTILQESLPGLRDC 855
Query: 617 ILKCDMSAWQKVYYQQVTDVGRVGLDNGSGKSKSLQNLTMQLRKCCNHPYLFVGDYDMYK 676
++ + QK ++ S++ +L HP L++ + K
Sbjct: 856 VVVLNPPFQQKKILDRID------------TSQNTFEFEHKLSAVSVHPSLYLC-CNPTK 902
Query: 677 RKEIVRASGKFELLDRLLPK-------------LRRAG---HRVLLFSQ-MTRLMDVLEI 719
++++V L RL K +R +G +VL++SQ + L ++E
Sbjct: 903 KEDLVIGPATLGTLKRLRLKYEEGVKTKFLIDFIRISGTVKEKVLVYSQYIDTLKLIMEQ 962
Query: 720 YLRLHDF----KYLRLDGSTKTEERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQTADT 775
+ D+ + L + G + +R ++ FN PDS + L ST+A G++L A
Sbjct: 963 LIAECDWTEGEQILLMHGKVEQRDRQHMIDNFNKPDSGSKVLLASTKACSEGISLVGASR 1022
Query: 776 VIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLV 810
V+I D WNP ++ QA RA RIGQK+ V ++ L+
Sbjct: 1023 VVILDVVWNPSVESQAISRAFRIGQKRAVFIYHLM 1057
>AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:7097638-7101182 FORWARD LENGTH=888
Length = 888
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 19/201 (9%)
Query: 372 QGGELRQYQIEGLQWMIS-LFNNNLNG-ILADEMGLGKTIQTISLIAHLLEYKGVTGPHL 429
E++ +QIEG Q++ S L ++ G I+A G GKT IS + L P L
Sbjct: 346 HAAEMKPHQIEGFQFLCSNLVADDPGGCIMAHAPGSGKTFMIISFMQSFLAKYPQAKP-L 404
Query: 430 IVAPKAVLPNWMSEFSTW-VPSITTV-LYDGRLEER----KAMKEELSGEGKFNVLITHY 483
+V PK +LP W EF W V I + Y + E R +K+ + + + +
Sbjct: 405 VVLPKGILPTWKKEFVRWQVEDIPLLDFYSAKAENRAQQLSILKQWMEKKSILFLGYQQF 464
Query: 484 DLIMRD--------KAFLKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGT 535
I+ D + L K+ LI+DEGH +N ++ L ++L + R+++L+GT
Sbjct: 465 STIVCDDTTDSLSCQEILLKVP-SILILDEGHTPRNEDTNLLQSL-AQVQTPRKVVLSGT 522
Query: 536 PIQNNLQELWSLLNFLLPNIF 556
QN+++E++++LN + P
Sbjct: 523 LYQNHVKEVFNILNLVRPKFL 543
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 8/124 (6%)
Query: 700 AGHRVLLFSQMTRLMDVLEIYLRLHDF-----KYLRLDGSTKTEERGTLLKKFNA-PDSP 753
AG ++L+FSQ + LE L + L G+T +E+R ++ FN+ PD+
Sbjct: 709 AGEKLLVFSQYLIPLKFLERLAALAKGWKLGKEVFVLTGNTSSEQREWSMETFNSSPDAK 768
Query: 754 YFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVG 813
+F S +A G G++L A ++I D NP + +QA RA R GQKK V + L++
Sbjct: 769 --IFFGSIKACGEGISLVGASRILILDVPLNPSVTRQAIGRAFRPGQKKMVHAYRLIAGS 826
Query: 814 SIEE 817
S EE
Sbjct: 827 SPEE 830
>AT1G08060.2 | Symbols: MOM, MOM1 | ATP-dependent helicase family
protein | chr1:2501981-2510488 REVERSE LENGTH=2001
Length = 2001
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 93/191 (48%), Gaps = 17/191 (8%)
Query: 650 SLQNLTMQLRKCCNHPY--------LFVGDYDMYKRKEI-VRASGKFELLDRLLPKLRRA 700
+L+ +RK C+HPY L + ++++ ++ ++ASGK LLD++L +++
Sbjct: 515 ALEETLNSVRKTCDHPYVMDASLKQLLTKNLELHEILDVEIKASGKLHLLDKMLTHIKKN 574
Query: 701 GHRVLLFSQMTRLMDVLEIYLRLHDFKYLRLDGSTKTEERGTLLKKFNAP------DSPY 754
G + ++F Q T+ + L + L DF R K+ E G K N+ +S
Sbjct: 575 GLKAVVFYQATQTPEGLLLGNILEDFVGQRF--GPKSYEHGIYSSKKNSAINNFNKESQC 632
Query: 755 FMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGS 814
+ LL TRA + L AD I+F S NP D + ++ + ++F L SV +
Sbjct: 633 CVLLLETRACSQTIKLLRADAFILFGSSLNPSHDVKHVEKIKIESCSERTKIFRLYSVCT 692
Query: 815 IEEVILERAKQ 825
+EE L A+Q
Sbjct: 693 VEEKALILARQ 703
>AT1G08060.1 | Symbols: MOM, MOM1 | ATP-dependent helicase family
protein | chr1:2501981-2510488 REVERSE LENGTH=2001
Length = 2001
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 93/191 (48%), Gaps = 17/191 (8%)
Query: 650 SLQNLTMQLRKCCNHPY--------LFVGDYDMYKRKEI-VRASGKFELLDRLLPKLRRA 700
+L+ +RK C+HPY L + ++++ ++ ++ASGK LLD++L +++
Sbjct: 515 ALEETLNSVRKTCDHPYVMDASLKQLLTKNLELHEILDVEIKASGKLHLLDKMLTHIKKN 574
Query: 701 GHRVLLFSQMTRLMDVLEIYLRLHDFKYLRLDGSTKTEERGTLLKKFNAP------DSPY 754
G + ++F Q T+ + L + L DF R K+ E G K N+ +S
Sbjct: 575 GLKAVVFYQATQTPEGLLLGNILEDFVGQRF--GPKSYEHGIYSSKKNSAINNFNKESQC 632
Query: 755 FMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGS 814
+ LL TRA + L AD I+F S NP D + ++ + ++F L SV +
Sbjct: 633 CVLLLETRACSQTIKLLRADAFILFGSSLNPSHDVKHVEKIKIESCSERTKIFRLYSVCT 692
Query: 815 IEEVILERAKQ 825
+EE L A+Q
Sbjct: 693 VEEKALILARQ 703
>AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 |
chr5:6899015-6903266 REVERSE LENGTH=1261
Length = 1261
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 53/89 (59%)
Query: 729 LRLDGSTKTEERGTLLKKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMD 788
L L G + ERG ++ KF P +P + L S A G++L A VI+ DS+WNP
Sbjct: 1111 LTLTGDLELFERGRVIDKFEEPGNPSRVLLASITACAEGISLTAASRVIMLDSEWNPSKT 1170
Query: 789 QQAEDRAHRIGQKKEVRVFVLVSVGSIEE 817
+QA RA R GQ+K V V+ L+S G++EE
Sbjct: 1171 KQAIARAFRPGQQKVVYVYQLLSRGTLEE 1199
>AT1G61140.2 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22536293-22540610 REVERSE
LENGTH=1022
Length = 1022
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 21/193 (10%)
Query: 493 LKKIHWRYLIVDEGHRLKNHESALARTLDSGYHIQRRLLLTGTPIQNNLQELWSLLNFLL 552
L K+ W +++DE +KN+++ +AR G +RR L+GTPIQN++ +L+S FL
Sbjct: 789 LAKVSWFRVVLDEAQSIKNYKTQVARAC-WGLRAKRRWCLSGTPIQNSIDDLYSYFRFLK 847
Query: 553 PNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKDEVEK---- 608
+ ++S F P + ++L +++ +LRR K +
Sbjct: 848 YDPYSSYVLFCSTIKNPIT---------RNPVKGYQKLQAILKTVMLRRTKGSLLDGKPI 898
Query: 609 -CLPEKSQVILKCDMSAWQKVYYQQVTDVGRVGL----DNGSGKSKSLQNLTM--QLRKC 661
LP KS + K D + ++ +Y ++ R + G+ K + L M +LR+
Sbjct: 899 ISLPPKSIELRKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQA 958
Query: 662 CNHPYLFVGDYDM 674
C+HP L G+Y
Sbjct: 959 CDHPLLVNGEYSF 971
>AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 |
chr3:14755906-14760085 REVERSE LENGTH=1256
Length = 1256
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 65/120 (54%), Gaps = 5/120 (4%)
Query: 703 RVLLFSQ-MTRLMDVLEIYLRLHDFK----YLRLDGSTKTEERGTLLKKFNAPDSPYFMF 757
++L+F + + LE++ + +K L L G + ERG ++ KF P +
Sbjct: 1074 KILIFCHNIAPIRLFLELFENVFRWKRGRELLTLTGDLELFERGRVIDKFEEPGGQSRVL 1133
Query: 758 LLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEE 817
L S A G++L A VI+ DS+WNP +QA RA R GQ+K V V+ L+S G++EE
Sbjct: 1134 LASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLSRGTLEE 1193
>AT2G40770.1 | Symbols: | zinc ion binding;DNA
binding;helicases;ATP binding;nucleic acid binding |
chr2:17013535-17021315 REVERSE LENGTH=1664
Length = 1664
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 120/295 (40%), Gaps = 66/295 (22%)
Query: 425 TGPHLIVAPKAVLPNWMSEFS--TWVPSITTVLYDG----RLEERKAMKEELSGEGKFNV 478
TG LIV P +LP W SE + T + S+ T +Y+G L E + +++ ++
Sbjct: 499 TGATLIVCPAPILPQWHSEITRHTRLGSLITCIYEGVRNASLSEEPMI--DITELLNADI 556
Query: 479 LITHYDLIMRDKAF------------------------LKKIHWRYLIVDEGHRLKNHES 514
++T YD++ D L +I W + +DE ++++ +
Sbjct: 557 VLTTYDVLKEDLTHDFDRHDGDRHCLRFQKRYPVIPTPLTRIFWWRICLDEAQMVESNAA 616
Query: 515 ALARTLDSGYHIQRRLLLTGTPIQNNLQELWSLLNFLLPNIFNSVQNFEDWFNAPFADRV 574
A A + + + R +TGTPIQ L +L+ LL FL N F+ + + + P+ +R
Sbjct: 617 A-ATEMALRLYTKHRWCITGTPIQRKLDDLFGLLKFLKANPFDVSRWWIEVIRDPY-ERR 674
Query: 575 DVSLTDEEQLLIIRRLHQVIRPFILRRKKDEV--EKCLPEKSQVILKCDMSAWQKVYYQQ 632
D + H+ + + R K V E LP + + + SA ++ +Y +
Sbjct: 675 DTK--------AMEFTHKFFKQVMWRSSKVHVADELQLPPQEECVSWLKFSAIEEHFYSR 726
Query: 633 VTDV-------------------GRVGLDN---GSGKSKSLQNLTMQLRKCCNHP 665
D G DN ++ L N ++LR+ C HP
Sbjct: 727 QHDTCVSYAREVIETLKRDILKRGHTSSDNPLVTHAEAAKLLNSLLKLRQACCHP 781
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 16/137 (11%)
Query: 703 RVLLFSQMTRLMDVLEIYLRLHDFKYLRLDGSTKTEERGTLLKKFNAPDS---------- 752
+VL+FS ++DVLE + +R+ G K++ T + KF +
Sbjct: 1451 KVLVFSSWNDVLDVLEHAFAANSITCIRMKGGRKSQ---TAISKFKGSEKETQKTNSHQK 1507
Query: 753 ---PYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVL 809
+ LL + G GLNL A VI+ + NP + QA R HRIGQ+K V
Sbjct: 1508 EEKSIQVLLLLVQHGANGLNLLEAQHVILVEPLLNPAAEAQAVGRVHRIGQEKPTLVHRF 1567
Query: 810 VSVGSIEEVILERAKQK 826
+ G++EE I + + K
Sbjct: 1568 LVSGTVEESIYKLNRNK 1584
>AT3G54460.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / F-box family protein |
chr3:20162050-20167186 REVERSE LENGTH=1378
Length = 1378
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 4/119 (3%)
Query: 703 RVLLFSQMTRLMDVLEIYLRLHDFKYLRLDGSTKTEERGTLLKKF-NAPDSPYFMFLLST 761
+VL+FSQ + V+E L K+ ++ ++ + L F N D M LL
Sbjct: 1195 KVLIFSQFLEHIHVIEQQLTTAGIKFGKMYSPMQSYNKMKALAMFQNDADC---MALLMD 1251
Query: 762 RAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVIL 820
+G LGL+L V + + W+ +++Q RAHR+G K+ + V L G+IEE ++
Sbjct: 1252 GSGALGLDLSFVTHVFLMEPIWDKSLEEQVISRAHRMGAKRPIFVETLTMRGTIEEQMM 1310