Miyakogusa Predicted Gene
- Lj5g3v2058540.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2058540.1 Non Chatacterized Hit- tr|I1NGB7|I1NGB7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23235
PE,77.8,0,RNI-like,NULL; no description,NULL; WPP,WPP domain;
LRR_6,NULL; seg,NULL; FAMILY NOT NAMED,NULL; Leu,CUFF.56580.1
(563 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G19320.1 | Symbols: RANGAP2 | RAN GTPase activating protein 2... 620 e-177
AT3G63130.2 | Symbols: RANGAP1 | RAN GTPase activating protein 1... 599 e-171
AT3G63130.1 | Symbols: RANGAP1, ATRANGAP1 | RAN GTPase activatin... 599 e-171
AT3G06000.1 | Symbols: | RNI-like superfamily protein | chr3:18... 135 5e-32
AT1G10510.1 | Symbols: emb2004 | RNI-like superfamily protein | ... 112 6e-25
AT1G47200.1 | Symbols: WPP2 | WPP domain protein 2 | chr1:172981... 60 5e-09
AT5G43070.1 | Symbols: WPP1 | WPP domain protein 1 | chr5:172892... 54 3e-07
>AT5G19320.1 | Symbols: RANGAP2 | RAN GTPase activating protein 2 |
chr5:6505310-6506947 REVERSE LENGTH=545
Length = 545
Score = 620 bits (1598), Expect = e-177, Method: Compositional matrix adjust.
Identities = 324/526 (61%), Positives = 403/526 (76%), Gaps = 32/526 (6%)
Query: 3 LNSQNRPFSIKLWPPSQNTRQTLVERMTNNLTTKSIFTQKYGTLDXXXXXXXXXXXXXXX 62
L+S+ FSIKLWPPS TR+ L+ER+TNN ++K+IFT+KYG+L
Sbjct: 5 LDSRPHAFSIKLWPPSLPTRKALIERITNNFSSKTIFTEKYGSLTKDQATENAKRIEDIA 64
Query: 63 FVTANLHYEKEPDGDGGSAVQLYAKECSKLLLDVLKRGPSEKDSKEVVAADITTPEKDSK 122
F TAN +E+EPDGDGGSAVQLYAKECSKL+L+VLK+GP K VAA
Sbjct: 65 FSTANQQFEREPDGDGGSAVQLYAKECSKLILEVLKKGPVAK-----VAA---------- 109
Query: 123 EVEGADITTTEKDSKEVVADDITTTASTKSVFDISKGQRAFIEAEEAQELLRPLQVPGNS 182
+E++++D + + ++ FDISKG+RAFIEAEEA+ELL+PL+ PGN+
Sbjct: 110 --------------RELISED--SVSPRETFFDISKGKRAFIEAEEAEELLKPLKEPGNA 153
Query: 183 FTKICFSNRSFGLGAAKVAQPILISLRDQLKEVDLSDFIAGRPETEALDVMKIFSAALEG 242
+TKICFSNRSFGLGAA+VA+PIL SL+DQLKEVDLSDF+AGRPE EAL+VM IFS AL+G
Sbjct: 154 YTKICFSNRSFGLGAARVAEPILASLKDQLKEVDLSDFVAGRPELEALEVMNIFSDALQG 213
Query: 243 SVLKSLNLSDNALGEKGVRAFEALLQSQNFLEELYLMNDGISEEAAQAVCELIPSTEKLK 302
S+L SLNLSDNALGEKGVRAF ALL+S + LEELYLMNDGIS+EAAQAV ELIPSTE L+
Sbjct: 214 SILSSLNLSDNALGEKGVRAFGALLKSLSSLEELYLMNDGISKEAAQAVSELIPSTENLR 273
Query: 303 VLHFHNNMTGDEGALSIAEIVKRSPSLEDFRCSSTRIGTEGGVALAEALGNCTHLQRIDL 362
VLHFHNNMTGDEGAL+IAE+VKRSP LE+FRCSSTR+G++GG+AL+EAL +CTH++++DL
Sbjct: 274 VLHFHNNMTGDEGALAIAEVVKRSPLLENFRCSSTRVGSKGGIALSEALEHCTHMEKLDL 333
Query: 363 RDNMLGVEGGVSLSKALIKHPELREIYLSYLNLENDGAIAVLDALKESAPHLEVLEMSGN 422
RDNM G E GVSLSK L + E+YLSYLNLE++GAIA+++ALKESA +EVLEM+GN
Sbjct: 334 RDNMFGTEAGVSLSKTLSSFKHMTELYLSYLNLEDEGAIAIVNALKESASPIEVLEMAGN 393
Query: 423 EISVEXXXXXXXXXXGKQCLAKLNFSENELKDEGAIKISKAL-EGLVQLKEIDLSSNQIT 481
+I+VE KQ L KLN SENELKDEG ++I+ + EG +L+ ID+S+N I
Sbjct: 394 DITVEAASAIAACVAAKQDLNKLNLSENELKDEGCVQIANCIEEGHSKLQYIDMSTNYIR 453
Query: 482 GAGARELALTVVQKADFKSLNINGNFISNEGIDELTDILKNSPDVL 527
AGAR LA VV+K FK LNI+GN IS EGI+EL +I K SP++L
Sbjct: 454 RAGARALAHVVVKKEAFKLLNIDGNIISEEGIEELKEIFKKSPELL 499
>AT3G63130.2 | Symbols: RANGAP1 | RAN GTPase activating protein 1 |
chr3:23325108-23326715 FORWARD LENGTH=535
Length = 535
Score = 599 bits (1545), Expect = e-171, Method: Compositional matrix adjust.
Identities = 312/523 (59%), Positives = 378/523 (72%), Gaps = 37/523 (7%)
Query: 5 SQNRPFSIKLWPPSQNTRQTLVERMTNNLTTKSIFTQKYGTLDXXXXXXXXXXXXXXXFV 64
+QNR S+K+WPPS++TR LVERMT N+TT SIF++KYG L F
Sbjct: 8 TQNRVLSVKMWPPSKSTRLMLVERMTKNITTPSIFSRKYGLLSVEEAEQDAKRIEDLAFA 67
Query: 65 TANLHYEKEPDGDGGSAVQLYAKECSKLLLDVLKRGPSEKDSKEVVAADITTPEKDSKEV 124
TAN H++ EPDGDG SAV +YAKE SKL+LDV+KRGP E+ EV KD
Sbjct: 68 TANKHFQNEPDGDGTSAVHVYAKESSKLMLDVIKRGPQEESEVEV--------SKD---- 115
Query: 125 EGADITTTEKDSKEVVADDITTTASTKSVFDISKGQRAFIEAEEAQELLRPLQVPGNSFT 184
D+ FDIS G RAFIE EEA++LLRPL P NS+T
Sbjct: 116 --GDV-----------------------FFDISGGSRAFIEEEEARDLLRPLADPRNSYT 150
Query: 185 KICFSNRSFGLGAAKVAQPILISLRDQLKEVDLSDFIAGRPETEALDVMKIFSAALEGSV 244
KI FSNRSFG AAK A +L S++DQL EVDLSDF+AGRPE EAL+VM +FS+ALEGS
Sbjct: 151 KIRFSNRSFGSEAAKFAASVLSSIKDQLTEVDLSDFVAGRPEAEALEVMNMFSSALEGSK 210
Query: 245 LKSLNLSDNALGEKGVRAFEALLQSQNFLEELYLMNDGISEEAAQAVCELIPSTEKLKVL 304
L+ LNLSDNALGEKG+RAF +L+ SQ+ LEELYLMNDGISE+AA+AV EL+PST+K++VL
Sbjct: 211 LRYLNLSDNALGEKGIRAFASLINSQHDLEELYLMNDGISEDAARAVRELLPSTDKIRVL 270
Query: 305 HFHNNMTGDEGALSIAEIVKRSPSLEDFRCSSTRIGTEGGVALAEALGNCTHLQRIDLRD 364
FHNNMTGDEGA +IAEIV+ PSLEDFRCSSTRIG+EGGVALAEAL +C+HL+++DLRD
Sbjct: 271 QFHNNMTGDEGATAIAEIVRECPSLEDFRCSSTRIGSEGGVALAEALEHCSHLKKLDLRD 330
Query: 365 NMLGVEGGVSLSKALIKHPELREIYLSYLNLENDGAIAVLDALKESAPHLEVLEMSGNEI 424
NM GVEGG++L+K L L EIY+SYLNLE++G A+ +AL +SAP LEVLE++GN+I
Sbjct: 331 NMFGVEGGIALAKTLSVLTHLTEIYMSYLNLEDEGTEALSEALLKSAPSLEVLELAGNDI 390
Query: 425 SVEXXXXXXXXXXGKQCLAKLNFSENELKDEGAIKISKALEGLVQLKEIDLSSNQITGAG 484
+V+ KQ LAKLN SENELKDEG I I+KA+EG QL E+DLS+N I AG
Sbjct: 391 TVKSTGNLAACIASKQSLAKLNLSENELKDEGTILIAKAVEGHDQLVEVDLSTNMIRRAG 450
Query: 485 ARELALTVVQKADFKSLNINGNFISNEGIDELTDILKNSPDVL 527
AR LA TVV+K FK LNINGNFIS EGIDE+ D+ K+ D L
Sbjct: 451 ARALAQTVVKKNTFKLLNINGNFISEEGIDEVNDMFKDCLDKL 493
>AT3G63130.1 | Symbols: RANGAP1, ATRANGAP1 | RAN GTPase activating
protein 1 | chr3:23325108-23326715 FORWARD LENGTH=535
Length = 535
Score = 599 bits (1545), Expect = e-171, Method: Compositional matrix adjust.
Identities = 312/523 (59%), Positives = 378/523 (72%), Gaps = 37/523 (7%)
Query: 5 SQNRPFSIKLWPPSQNTRQTLVERMTNNLTTKSIFTQKYGTLDXXXXXXXXXXXXXXXFV 64
+QNR S+K+WPPS++TR LVERMT N+TT SIF++KYG L F
Sbjct: 8 TQNRVLSVKMWPPSKSTRLMLVERMTKNITTPSIFSRKYGLLSVEEAEQDAKRIEDLAFA 67
Query: 65 TANLHYEKEPDGDGGSAVQLYAKECSKLLLDVLKRGPSEKDSKEVVAADITTPEKDSKEV 124
TAN H++ EPDGDG SAV +YAKE SKL+LDV+KRGP E+ EV KD
Sbjct: 68 TANKHFQNEPDGDGTSAVHVYAKESSKLMLDVIKRGPQEESEVEV--------SKD---- 115
Query: 125 EGADITTTEKDSKEVVADDITTTASTKSVFDISKGQRAFIEAEEAQELLRPLQVPGNSFT 184
D+ FDIS G RAFIE EEA++LLRPL P NS+T
Sbjct: 116 --GDV-----------------------FFDISGGSRAFIEEEEARDLLRPLADPRNSYT 150
Query: 185 KICFSNRSFGLGAAKVAQPILISLRDQLKEVDLSDFIAGRPETEALDVMKIFSAALEGSV 244
KI FSNRSFG AAK A +L S++DQL EVDLSDF+AGRPE EAL+VM +FS+ALEGS
Sbjct: 151 KIRFSNRSFGSEAAKFAASVLSSIKDQLTEVDLSDFVAGRPEAEALEVMNMFSSALEGSK 210
Query: 245 LKSLNLSDNALGEKGVRAFEALLQSQNFLEELYLMNDGISEEAAQAVCELIPSTEKLKVL 304
L+ LNLSDNALGEKG+RAF +L+ SQ+ LEELYLMNDGISE+AA+AV EL+PST+K++VL
Sbjct: 211 LRYLNLSDNALGEKGIRAFASLINSQHDLEELYLMNDGISEDAARAVRELLPSTDKIRVL 270
Query: 305 HFHNNMTGDEGALSIAEIVKRSPSLEDFRCSSTRIGTEGGVALAEALGNCTHLQRIDLRD 364
FHNNMTGDEGA +IAEIV+ PSLEDFRCSSTRIG+EGGVALAEAL +C+HL+++DLRD
Sbjct: 271 QFHNNMTGDEGATAIAEIVRECPSLEDFRCSSTRIGSEGGVALAEALEHCSHLKKLDLRD 330
Query: 365 NMLGVEGGVSLSKALIKHPELREIYLSYLNLENDGAIAVLDALKESAPHLEVLEMSGNEI 424
NM GVEGG++L+K L L EIY+SYLNLE++G A+ +AL +SAP LEVLE++GN+I
Sbjct: 331 NMFGVEGGIALAKTLSVLTHLTEIYMSYLNLEDEGTEALSEALLKSAPSLEVLELAGNDI 390
Query: 425 SVEXXXXXXXXXXGKQCLAKLNFSENELKDEGAIKISKALEGLVQLKEIDLSSNQITGAG 484
+V+ KQ LAKLN SENELKDEG I I+KA+EG QL E+DLS+N I AG
Sbjct: 391 TVKSTGNLAACIASKQSLAKLNLSENELKDEGTILIAKAVEGHDQLVEVDLSTNMIRRAG 450
Query: 485 ARELALTVVQKADFKSLNINGNFISNEGIDELTDILKNSPDVL 527
AR LA TVV+K FK LNINGNFIS EGIDE+ D+ K+ D L
Sbjct: 451 ARALAQTVVKKNTFKLLNINGNFISEEGIDEVNDMFKDCLDKL 493
>AT3G06000.1 | Symbols: | RNI-like superfamily protein |
chr3:1801446-1802081 FORWARD LENGTH=211
Length = 211
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 106/178 (59%), Gaps = 13/178 (7%)
Query: 350 ALGNCTHLQRIDLRDNMLGVEGGVSLSKALIKHPELREIYLSYLNLENDGAIAVLDALKE 409
A CTH++ GVS+SK L I LSY NLEN GAIA+++ALK
Sbjct: 16 AFETCTHIKV------------GVSMSKPFSSFSFLTVINLSYTNLENGGAIALVNALKN 63
Query: 410 SAPHLEVLEMSGNEISVEXXXXXXXXXXGKQCLAKLNFSENELKDEGAIKISKALEGLVQ 469
SAP L+V+EM+GN I+ E K+ L KLN SEN+LKDEG ++I K++E +
Sbjct: 64 SAPSLQVIEMAGNNITYEAATAIAVCLAAKRHLKKLNLSENDLKDEGCVEIVKSMEDW-E 122
Query: 470 LKEIDLSSNQITGAGARELALTVVQKADFKSLNINGNFISNEGIDELTDILKNSPDVL 527
L+ +D+S N + GA LA VV+K FK LNI+GN IS +GI+E+ I N P +L
Sbjct: 123 LEYVDMSYNDLRREGALRLARVVVKKGSFKMLNIDGNMISLKGIEEIKVIFTNCPKLL 180
>AT1G10510.1 | Symbols: emb2004 | RNI-like superfamily protein |
chr1:3461771-3465590 FORWARD LENGTH=605
Length = 605
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 138/279 (49%)
Query: 248 LNLSDNALGEKGVRAFEALLQSQNFLEELYLMNDGISEEAAQAVCELIPSTEKLKVLHFH 307
++ S N + GV+AF+ +LQS L+ L L + I +E A+ +C + +++L +
Sbjct: 203 VSFSANGITAAGVKAFDGVLQSNIMLKILNLSGNPIGDEGAKTLCATLMENSSIEILQLN 262
Query: 308 NNMTGDEGALSIAEIVKRSPSLEDFRCSSTRIGTEGGVALAEALGNCTHLQRIDLRDNML 367
+ GDEGA IAE++KR+ +L ++ I G +LA AL ++ + L N
Sbjct: 263 STDIGDEGAKEIAELLKRNSTLRIIELNNNMIDYSGFTSLAGALLENNTIRNLHLNGNYG 322
Query: 368 GVEGGVSLSKALIKHPELREIYLSYLNLENDGAIAVLDALKESAPHLEVLEMSGNEISVE 427
G G +L+K L + LRE++L ++ ++G A++ L + +L++ N IS +
Sbjct: 323 GALGANALAKGLEGNKSLRELHLHGNSIGDEGTRALMAGLSSHKGKVALLDLGNNSISAK 382
Query: 428 XXXXXXXXXXGKQCLAKLNFSENELKDEGAIKISKALEGLVQLKEIDLSSNQITGAGARE 487
+ L LN N++ DEGA KI+ +L+ + IDL N I G
Sbjct: 383 GAFYVAEYIKRSKSLVWLNLYMNDIGDEGAEKIADSLKQNRSIATIDLGGNNIHAEGVNA 442
Query: 488 LALTVVQKADFKSLNINGNFISNEGIDELTDILKNSPDV 526
+A + A +L + N I +G L++ILK +V
Sbjct: 443 IAQALKDNAIITTLEVGYNPIGPDGAKALSEILKFHGNV 481
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 141/285 (49%), Gaps = 5/285 (1%)
Query: 238 AALEGSVLKSLNLSDNALGEKGVRAFEALLQSQNFLEELYLMNDGISEEAAQAVCELIPS 297
A LE + +++L+L+ N G G A L+ L EL+L + I +E +A+ + S
Sbjct: 305 ALLENNTIRNLHLNGNYGGALGANALAKGLEGNKSLRELHLHGNSIGDEGTRALMAGLSS 364
Query: 298 TE-KLKVLHFHNNMTGDEGALSIAEIVKRSPSLEDFRCSSTRIGTEGGVALAEALGNCTH 356
+ K+ +L NN +GA +AE +KRS SL IG EG +A++L
Sbjct: 365 HKGKVALLDLGNNSISAKGAFYVAEYIKRSKSLVWLNLYMNDIGDEGAEKIADSLKQNRS 424
Query: 357 LQRIDLRDNMLGVEGGVSLSKALIKHPELREIYLSYLNLENDGAIAVLDALKESAPHLEV 416
+ IDL N + EG ++++AL + + + + Y + DGA A+ + LK +++
Sbjct: 425 IATIDLGGNNIHAEGVNAIAQALKDNAIITTLEVGYNPIGPDGAKALSEILKFHG-NVKT 483
Query: 417 LEMSGNEISVEXXXXXXXXXXGKQCLAKLNFSENELKDEGAIKISKALEGLVQ-LKEIDL 475
L++ +I+ + ++ L+ N L+DEGA ++++L+ + + L +DL
Sbjct: 484 LKLGWCQIAAKGAEHVADMLRYNNTISVLDLRANGLRDEGASCLARSLKVVNEALTSVDL 543
Query: 476 SSNQIT--GAGARELALTVVQKADFKSLNINGNFISNEGIDELTD 518
N+I GA A AL + S+N+ NFI+ G LTD
Sbjct: 544 GFNEIRDDGAFAIAQALKANEDVTVTSINLGNNFITKFGQSALTD 588
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 134/285 (47%), Gaps = 34/285 (11%)
Query: 245 LKSLNLSDNALGEKGVRAFEALLQSQNFLEELYLMNDGISEEAAQAVCELIPSTEKLKVL 304
+S+++S G++G+ L +EE+ +GI+ +A ++ S LK+L
Sbjct: 172 FRSVDMSGCNFGDEGLFFLAESLGYNQTVEEVSFSANGITAAGVKAFDGVLQSNIMLKIL 231
Query: 305 HFHNNMTGDEGALSIAEIVKRSPSLEDFRCSSTRIGTEGGVALAEALGNCTHLQRIDLRD 364
+ N GDEGA ++ + + S+E + +ST IG EG +AE L + L+ I+L +
Sbjct: 232 NLSGNPIGDEGAKTLCATLMENSSIEILQLNSTDIGDEGAKEIAELLKRNSTLRIIELNN 291
Query: 365 NMLGVEGGVSLSKALIKHPELREIYLSYLNLENDGAIAVLDALKESAPHLEVLEMSGNEI 424
NM+ G SL+ AL+++ +R ++L+ N G +AL A LE
Sbjct: 292 NMIDYSGFTSLAGALLENNTIRNLHLN----GNYGGALGANAL---AKGLE--------- 335
Query: 425 SVEXXXXXXXXXXGKQCLAKLNFSENELKDEGAIKISKAL---EGLVQLKEIDLSSNQIT 481
G + L +L+ N + DEG + L +G V L +DL +N I+
Sbjct: 336 -------------GNKSLRELHLHGNSIGDEGTRALMAGLSSHKGKVAL--LDLGNNSIS 380
Query: 482 GAGARELALTVVQKADFKSLNINGNFISNEGIDELTDILKNSPDV 526
GA +A + + LN+ N I +EG +++ D LK + +
Sbjct: 381 AKGAFYVAEYIKRSKSLVWLNLYMNDIGDEGAEKIADSLKQNRSI 425
>AT1G47200.1 | Symbols: WPP2 | WPP domain protein 2 |
chr1:17298181-17298723 REVERSE LENGTH=180
Length = 180
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 2 ELNSQNRP--FSIKLWPPSQNTRQTLVERMTNNLTTKSIFTQKYGTLDXXXXXXXXXXXX 59
E S+ +P S+++WPP+Q TR ++ R+ L+T+SI +++YGTL
Sbjct: 46 EAESEKKPGGISLRIWPPTQKTRDAVLNRLIETLSTESILSKRYGTLKSDDATTVAKLIE 105
Query: 60 XXXFVTANLHYEKEPDGDGGSAVQLYAKECSKLLLDVLK 98
+ A+ D DG ++LY+KE SK +L+ +K
Sbjct: 106 EEAYGVASNAVSS--DDDGIKILELYSKEISKRMLESVK 142
>AT5G43070.1 | Symbols: WPP1 | WPP domain protein 1 |
chr5:17289259-17289726 REVERSE LENGTH=155
Length = 155
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 10 FSIKLWPPSQNTRQTLVERMTNNLTTKSIFTQKYGTLDXXXXXXXXXXXXXXXFVTANLH 69
S+++WPP+Q TR ++ R+ L+T+SI ++++G+L+ + A+
Sbjct: 40 ISLRIWPPTQKTRDAVINRLIETLSTESILSKRFGSLESEEASSVAKSIEDEAYAIASAT 99
Query: 70 YEKEPDGDGGSAVQLYAKECSKLLLDVLK 98
D DG ++ Y+KE SK +L+ +K
Sbjct: 100 VFG--DDDGIEILKAYSKEISKRMLESVK 126